BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004544
         (745 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359478353|ref|XP_002285176.2| PREDICTED: homeobox-leucine zipper protein REVOLUTA [Vitis
           vinifera]
          Length = 843

 Score = 1395 bits (3610), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 675/747 (90%), Positives = 704/747 (94%), Gaps = 13/747 (1%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAM I QQ ++   SSSGSINKH LD+GKYVRYTAEQVEALERVY ECPKPSSLRRQQLI
Sbjct: 1   MAMAIAQQHRE--SSSSGSINKH-LDSGKYVRYTAEQVEALERVYLECPKPSSLRRQQLI 57

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS
Sbjct: 58  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 117

Query: 121 QLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 180
           QLVCENGYM+QQL+T  ATTDASC+SVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT
Sbjct: 118 QLVCENGYMRQQLQTVSATTDASCESVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 177

Query: 181 GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDC 240
           GTAVDWVQMPGMKPGPDSVGIFAIS SCSGVAARACGLVSLEP+KIAEILKDRPSWFRDC
Sbjct: 178 GTAVDWVQMPGMKPGPDSVGIFAISHSCSGVAARACGLVSLEPSKIAEILKDRPSWFRDC 237

Query: 241 RSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS 300
           RSLEVFTMFPAGN GT+ELLYTQ YAPTTLAPARDFWTLRYTT+LDNGSLVVCERSLSGS
Sbjct: 238 RSLEVFTMFPAGNGGTVELLYTQIYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGS 297

Query: 301 GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV 360
           GAGPN A+AAQFVRAEMLPSG LIRPC+GGGSIIHIVDHLNLEAWSVPEVLRPLYESS+V
Sbjct: 298 GAGPNTAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRV 357

Query: 361 VAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL 410
           VAQ+MTIA          ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDA+NGFNDDGWSL
Sbjct: 358 VAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSL 417

Query: 411 MTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHR 470
           M+CDGAEDVIIAVNSTK+L+T SNP NSL+  GG+LCAKASMLLQNVPPA+LVRFLREHR
Sbjct: 418 MSCDGAEDVIIAVNSTKNLNTTSNPANSLSLPGGVLCAKASMLLQNVPPAVLVRFLREHR 477

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 530
           SEWADF+VDAYSAASLKA  Y+YPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL
Sbjct: 478 SEWADFSVDAYSAASLKASPYSYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 537

Query: 531 AQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
           A EDAF+SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDD PLLPSGFRIIPLDSK+
Sbjct: 538 AHEDAFMSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSKS 597

Query: 591 PDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
            DT +TLT HRTLDLTSSLEVGPATN AAGDSSSC++TRSVLTIAFQFPFESNLQDNVAT
Sbjct: 598 GDTQETLTTHRTLDLTSSLEVGPATNQAAGDSSSCYNTRSVLTIAFQFPFESNLQDNVAT 657

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELL 710
           MARQYVRSVISSVQRVAMAI PSGL P +GPKLS GSPEALTLAHWICQSYSYH+GAELL
Sbjct: 658 MARQYVRSVISSVQRVAMAISPSGLGPAVGPKLSAGSPEALTLAHWICQSYSYHVGAELL 717

Query: 711 RSDSVGGDSVLKNLWQHSDAILCCSLK 737
           RSDSVGGDSVLKNLW H DAILCCSLK
Sbjct: 718 RSDSVGGDSVLKNLWHHQDAILCCSLK 744


>gi|297746262|emb|CBI16318.3| unnamed protein product [Vitis vinifera]
          Length = 844

 Score = 1391 bits (3601), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 676/748 (90%), Positives = 705/748 (94%), Gaps = 14/748 (1%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAM I QQ ++   SSSGSINKH LD+GKYVRYTAEQVEALERVY ECPKPSSLRRQQLI
Sbjct: 1   MAMAIAQQHRE--SSSSGSINKH-LDSGKYVRYTAEQVEALERVYLECPKPSSLRRQQLI 57

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS
Sbjct: 58  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 117

Query: 121 QLVCENGYMKQQLRTA-PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKA 179
           QLVCENGYM+QQL+TA  ATTDASC+SVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKA
Sbjct: 118 QLVCENGYMRQQLQTASAATTDASCESVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKA 177

Query: 180 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD 239
           TGTAVDWVQMPGMKPGPDSVGIFAIS SCSGVAARACGLVSLEP+KIAEILKDRPSWFRD
Sbjct: 178 TGTAVDWVQMPGMKPGPDSVGIFAISHSCSGVAARACGLVSLEPSKIAEILKDRPSWFRD 237

Query: 240 CRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG 299
           CRSLEVFTMFPAGN GT+ELLYTQ YAPTTLAPARDFWTLRYTT+LDNGSLVVCERSLSG
Sbjct: 238 CRSLEVFTMFPAGNGGTVELLYTQIYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSG 297

Query: 300 SGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 359
           SGAGPN A+AAQFVRAEMLPSG LIRPC+GGGSIIHIVDHLNLEAWSVPEVLRPLYESS+
Sbjct: 298 SGAGPNTAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSR 357

Query: 360 VVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS 409
           VVAQ+MTIA          ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDA+NGFNDDGWS
Sbjct: 358 VVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWS 417

Query: 410 LMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH 469
           LM+CDGAEDVIIAVNSTK+L+T SNP NSL+  GG+LCAKASMLLQNVPPA+LVRFLREH
Sbjct: 418 LMSCDGAEDVIIAVNSTKNLNTTSNPANSLSLPGGVLCAKASMLLQNVPPAVLVRFLREH 477

Query: 470 RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHS 529
           RSEWADF+VDAYSAASLKA  Y+YPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHS
Sbjct: 478 RSEWADFSVDAYSAASLKASPYSYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHS 537

Query: 530 LAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSK 589
           LA EDAF+SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDD PLLPSGFRIIPLDSK
Sbjct: 538 LAHEDAFMSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSK 597

Query: 590 TPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVA 649
           + DT +TLT HRTLDLTSSLEVGPATN AAGDSSSC++TRSVLTIAFQFPFESNLQDNVA
Sbjct: 598 SGDTQETLTTHRTLDLTSSLEVGPATNQAAGDSSSCYNTRSVLTIAFQFPFESNLQDNVA 657

Query: 650 TMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAEL 709
           TMARQYVRSVISSVQRVAMAI PSGL P +GPKLS GSPEALTLAHWICQSYSYH+GAEL
Sbjct: 658 TMARQYVRSVISSVQRVAMAISPSGLGPAVGPKLSAGSPEALTLAHWICQSYSYHVGAEL 717

Query: 710 LRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           LRSDSVGGDSVLKNLW H DAILCCSLK
Sbjct: 718 LRSDSVGGDSVLKNLWHHQDAILCCSLK 745


>gi|255578153|ref|XP_002529946.1| DNA binding protein, putative [Ricinus communis]
 gi|223530576|gb|EEF32454.1| DNA binding protein, putative [Ricinus communis]
          Length = 842

 Score = 1387 bits (3589), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 672/747 (89%), Positives = 697/747 (93%), Gaps = 16/747 (2%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAMV      Q RE+SSGSINKH  D+GKYVRYTAEQVEALERVYSECPKPSSLRRQQLI
Sbjct: 3   MAMV------QHRETSSGSINKHLTDSGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 56

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKE+SRLQTVNRKLTAMNKLLMEENDRLQKQVS
Sbjct: 57  RECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVS 116

Query: 121 QLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 180
           QLVCENGYM+QQL+TA A TDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT
Sbjct: 117 QLVCENGYMRQQLQTASAATDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 176

Query: 181 GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDC 240
           GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDC
Sbjct: 177 GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDC 236

Query: 241 RSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS 300
           RSLEVFTMFPAGN GTIEL+Y+Q YAPTTLAPARDFWTLRYT++LDNGSLVVCERSLSGS
Sbjct: 237 RSLEVFTMFPAGNGGTIELVYSQVYAPTTLAPARDFWTLRYTSSLDNGSLVVCERSLSGS 296

Query: 301 GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV 360
           GAGPN A+AAQFVRAEMLPSG LIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV
Sbjct: 297 GAGPNAAAAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV 356

Query: 361 VAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL 410
           VAQ+MTIA          ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDA+NGFNDDGWSL
Sbjct: 357 VAQKMTIAALRFIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSL 416

Query: 411 MTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHR 470
           M+CDGAEDVI+ +NSTK+LS+ SN  NS AFLGGILCAKASMLLQNVPPA+LVRFLREHR
Sbjct: 417 MSCDGAEDVIVTINSTKNLSSTSNAANSFAFLGGILCAKASMLLQNVPPAVLVRFLREHR 476

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 530
           SEWADFNVDAYSAASLKAGSYA+PGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL
Sbjct: 477 SEWADFNVDAYSAASLKAGSYAFPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 536

Query: 531 AQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
            QEDAFVSRDIHLLQICSG+DENAVGACSELVFAPIDEMFPDD PLLPSGFRIIPLDSKT
Sbjct: 537 VQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSKT 596

Query: 591 PDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
            DT D LT  RTLDLTSSLEVGPA N  AGD+SS   TRSVLTIAFQFPFESNLQ+NVAT
Sbjct: 597 KDTQDALTTSRTLDLTSSLEVGPAANNTAGDASSSQSTRSVLTIAFQFPFESNLQENVAT 656

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELL 710
           MARQYVRSVISSVQRVAMAI PSGL P +GPKLSPGSPEALTLAHWICQSYSY+LGAELL
Sbjct: 657 MARQYVRSVISSVQRVAMAISPSGLGPAVGPKLSPGSPEALTLAHWICQSYSYYLGAELL 716

Query: 711 RSDSVGGDSVLKNLWQHSDAILCCSLK 737
           RSDS+ GDSVLK LW H DAILCCSLK
Sbjct: 717 RSDSLAGDSVLKQLWHHQDAILCCSLK 743


>gi|356539327|ref|XP_003538150.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Glycine
           max]
          Length = 842

 Score = 1341 bits (3470), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 650/748 (86%), Positives = 692/748 (92%), Gaps = 16/748 (2%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAMV+ Q ++    SSSGSI+KH LD+GKYVRYTAEQVEALERVY+ECPKPSSLRRQQLI
Sbjct: 1   MAMVVAQHRE---SSSSGSIDKH-LDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLI 56

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS
Sbjct: 57  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 116

Query: 121 QLVCENGYMKQQLRTAPATT-DASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKA 179
           QLVCENG+M+QQL T  ATT DASCDSVVTTPQH+LRDA+NPAGLLSIAEETL EFLSKA
Sbjct: 117 QLVCENGFMRQQLHTPSATTTDASCDSVVTTPQHTLRDASNPAGLLSIAEETLTEFLSKA 176

Query: 180 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD 239
           TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD
Sbjct: 177 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD 236

Query: 240 CRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG 299
           CRSLEVFTMFPAGN GTIEL+YTQ YAPTTLAPARDFWTLRYTT+L+NGSLVVCERSLSG
Sbjct: 237 CRSLEVFTMFPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSG 296

Query: 300 SGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 359
           SG GPNPA+AAQFVRAE LPSG LIRPC+GGGSIIHIVDHLNLEAWSVPEVLRPLYESSK
Sbjct: 297 SGTGPNPAAAAQFVRAETLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 356

Query: 360 VVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS 409
           VVAQ+MTIA          ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW+
Sbjct: 357 VVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWT 416

Query: 410 LMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH 469
           ++ CDGAEDVIIAVNSTK+LS  SNP +SL FLGGILCAKASMLLQNVPPA+LVRFLREH
Sbjct: 417 VLNCDGAEDVIIAVNSTKNLSGTSNPASSLTFLGGILCAKASMLLQNVPPAVLVRFLREH 476

Query: 470 RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHS 529
           RSEWADFNVDAYSAASLKAG+YAYPGMRPTRFTGSQIIMPLGHTIEHEE+LEVIRLEGHS
Sbjct: 477 RSEWADFNVDAYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHS 536

Query: 530 LAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSK 589
           LAQEDAFVSRDIHLLQICSG+DENAVGACSELVFAPIDEMFPDD PL+PSGFRIIPLDSK
Sbjct: 537 LAQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLVPSGFRIIPLDSK 596

Query: 590 TPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVA 649
             D  D +  +RTLDLTS  EVGPAT  A  D+SS  +TRSVLTIAFQFPF+S+LQDNVA
Sbjct: 597 PGDKKDAVATNRTLDLTSGFEVGPATT-AGADASSSQNTRSVLTIAFQFPFDSSLQDNVA 655

Query: 650 TMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAEL 709
            MARQYVRSVISSVQRVAMAI PSG++P++G KLSPGSPEA+TLAHWICQSYSY+LG++L
Sbjct: 656 VMARQYVRSVISSVQRVAMAISPSGINPSIGAKLSPGSPEAVTLAHWICQSYSYYLGSDL 715

Query: 710 LRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           LRSDS+ GD +LK LW H DAILCCSLK
Sbjct: 716 LRSDSLVGDMMLKQLWHHQDAILCCSLK 743


>gi|147783606|emb|CAN61612.1| hypothetical protein VITISV_013992 [Vitis vinifera]
          Length = 842

 Score = 1339 bits (3466), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 661/748 (88%), Positives = 691/748 (92%), Gaps = 16/748 (2%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAM I QQ ++   SSSGSINKH LD+GKYVRYTAEQVEALERVY ECPKPSSLRRQQLI
Sbjct: 1   MAMAIAQQHRE--SSSSGSINKH-LDSGKYVRYTAEQVEALERVYLECPKPSSLRRQQLI 57

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS
Sbjct: 58  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 117

Query: 121 QLVCENGYMKQQLRTA-PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKA 179
           QLVCENGYM+QQL+TA  ATTDASC+SVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKA
Sbjct: 118 QLVCENGYMRQQLQTASAATTDASCESVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKA 177

Query: 180 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD 239
           TGTAVDWVQMPGMKPGPDSVGIFAIS SCSG  + +         K  EILKDRPSWFRD
Sbjct: 178 TGTAVDWVQMPGMKPGPDSVGIFAISHSCSGSGSSSMRSCKFRTLK--EILKDRPSWFRD 235

Query: 240 CRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG 299
           CRSLEVFTMFPAGN GT+ELLYTQ YAPTTLAPARDFWTLRYTT+LDNGSLVVCERSLSG
Sbjct: 236 CRSLEVFTMFPAGNGGTVELLYTQIYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSG 295

Query: 300 SGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 359
           SGAGPN A+AAQFVRAEMLPSG LIRPC+GGGSIIHIVDHLNLEAWSVPEVLRPLYESS+
Sbjct: 296 SGAGPNTAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSR 355

Query: 360 VVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS 409
           VVAQ+MTIA          ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDA+NGFNDDGWS
Sbjct: 356 VVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWS 415

Query: 410 LMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH 469
           LM+CDGAEDVIIAVNSTK+L+T SNP NSL+  GG+LCAKASMLLQNVPPA+LVRFLREH
Sbjct: 416 LMSCDGAEDVIIAVNSTKNLNTTSNPANSLSLPGGVLCAKASMLLQNVPPAVLVRFLREH 475

Query: 470 RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHS 529
           RSEWADF+VDAYSAASLKA  Y+YPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHS
Sbjct: 476 RSEWADFSVDAYSAASLKASPYSYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHS 535

Query: 530 LAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSK 589
           LA EDAF+SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDD PLLPSGFRIIPLDSK
Sbjct: 536 LAHEDAFMSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSK 595

Query: 590 TPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVA 649
           + DT +TLT HRTLDLTSSLEVGPATN AAGDSSSC++TRSVLTIAFQFPFESNLQDNVA
Sbjct: 596 SGDTQETLTTHRTLDLTSSLEVGPATNQAAGDSSSCYNTRSVLTIAFQFPFESNLQDNVA 655

Query: 650 TMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAEL 709
           TMARQYVRSVISSVQRVAMAI PSGL P +GPKLS GSPEALTLAHWICQSYSYH+GAEL
Sbjct: 656 TMARQYVRSVISSVQRVAMAISPSGLGPAVGPKLSAGSPEALTLAHWICQSYSYHVGAEL 715

Query: 710 LRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           LRSDSVGGDSVLKNLW H DAILCCSLK
Sbjct: 716 LRSDSVGGDSVLKNLWHHQDAILCCSLK 743


>gi|356542619|ref|XP_003539764.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform 1
           [Glycine max]
          Length = 845

 Score = 1332 bits (3448), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 647/748 (86%), Positives = 691/748 (92%), Gaps = 17/748 (2%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAM + Q ++    SSSGSI+KH LD+GKYVRYTAEQVEALERVY+ECPKPSSLRRQQLI
Sbjct: 1   MAMAVAQHRE---SSSSGSIDKH-LDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLI 56

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS
Sbjct: 57  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 116

Query: 121 QLVCENGYMKQQLRT-APATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKA 179
           QLVCENG+M+QQL T + ATTDASCDSVVTTPQH++RDANNPAGLLSIAEETL EFLSKA
Sbjct: 117 QLVCENGFMRQQLHTPSAATTDASCDSVVTTPQHTMRDANNPAGLLSIAEETLTEFLSKA 176

Query: 180 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD 239
           TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD
Sbjct: 177 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD 236

Query: 240 CRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG 299
           CRSLEVFTMFPAGN GTIEL+YTQ YAPTTLAPARDFWTLRYTT+L+NGSLVVCERSLSG
Sbjct: 237 CRSLEVFTMFPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSG 296

Query: 300 SGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 359
           SG GPNPA+AAQFVRAE LPSG LIRPC+GGGSIIHIVDHLNLEAWSVPEVLRPLYESSK
Sbjct: 297 SGTGPNPAAAAQFVRAETLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 356

Query: 360 VVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS 409
           VVAQ+MTIA          ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW+
Sbjct: 357 VVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWT 416

Query: 410 LMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH 469
           ++ CDGAEDV IAVNSTK+LS  SNP +SL FLGGILCAKASMLLQNVPPA+LVRFLREH
Sbjct: 417 VLNCDGAEDVFIAVNSTKNLSGTSNPASSLTFLGGILCAKASMLLQNVPPAVLVRFLREH 476

Query: 470 RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHS 529
           RSEWADF+VDAYSAASLKAG+YAYPGMRPTRFTGSQIIMPLGHTIEHEE+LEVIRLEGHS
Sbjct: 477 RSEWADFSVDAYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHS 536

Query: 530 LAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSK 589
           LAQEDAFVSRDIHLLQICSG+DENAVGACSELVFAPIDEMFPDD PL+PSGFRIIPLDSK
Sbjct: 537 LAQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLIPSGFRIIPLDSK 596

Query: 590 TPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVA 649
             D  +  T +RTLDLTS  EVGPAT  A  D+SS  +TRSVLTIAFQFPF+S+LQDNVA
Sbjct: 597 PGDKKEVAT-NRTLDLTSGFEVGPATT-AGTDASSSQNTRSVLTIAFQFPFDSSLQDNVA 654

Query: 650 TMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAEL 709
            MARQYVRSVISSVQRVAMAI PSG+SP++G KLSPGSPEA+TLAHWICQSYSY++G++L
Sbjct: 655 VMARQYVRSVISSVQRVAMAISPSGISPSVGAKLSPGSPEAVTLAHWICQSYSYYIGSDL 714

Query: 710 LRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           LRSDS+ GD +LK LW H DAILCCSLK
Sbjct: 715 LRSDSLVGDMMLKQLWHHQDAILCCSLK 742


>gi|206572103|gb|ACI13684.1| putative REV HD-ZipIII [Malus x domestica]
          Length = 845

 Score = 1332 bits (3447), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 648/751 (86%), Positives = 687/751 (91%), Gaps = 19/751 (2%)

Query: 1   MAMVIQQQQQQQRESSSGS-INKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQL 59
           MAM +       RESSSGS INKH LD GKYVRYT+EQVEALERVY+ECPKPSSLRRQQL
Sbjct: 1   MAMAVAHH----RESSSGSSINKH-LDAGKYVRYTSEQVEALERVYAECPKPSSLRRQQL 55

Query: 60  IRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQV 119
           IREC ILSNIEP+QIKVWFQNRRCREKQRKE+SRLQTVNRKL+AMNKLLMEENDRLQKQV
Sbjct: 56  IRECSILSNIEPRQIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQV 115

Query: 120 SQLVCENGYMKQQLRTA-PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSK 178
           SQLVCENGYM+QQL +A  ATTDAS DSVVTTPQHSLRDANNPAGLLS+AEETLAEFLSK
Sbjct: 116 SQLVCENGYMRQQLHSASAATTDASGDSVVTTPQHSLRDANNPAGLLSVAEETLAEFLSK 175

Query: 179 ATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFR 238
           ATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFR
Sbjct: 176 ATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFR 235

Query: 239 DCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS 298
           DCRSLEVFTMFPAGN GTIEL+YTQ YAPTTLAPARDFWTLRYT TLDNGS VVCERSLS
Sbjct: 236 DCRSLEVFTMFPAGNGGTIELIYTQTYAPTTLAPARDFWTLRYTATLDNGSFVVCERSLS 295

Query: 299 GSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS 358
           GSGAGPNPASA+QFVR  MLPSG LIRPC+GGGSI+HIVDHLNLEAWSVPEVLRPLYESS
Sbjct: 296 GSGAGPNPASASQFVRGAMLPSGYLIRPCEGGGSIVHIVDHLNLEAWSVPEVLRPLYESS 355

Query: 359 KVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW 408
           KVVAQRMTIA          ETSGEVVY LGRQPAVLRTFSQRL RGFNDAVNGFNDDGW
Sbjct: 356 KVVAQRMTIAALRYIRQIAEETSGEVVYSLGRQPAVLRTFSQRLIRGFNDAVNGFNDDGW 415

Query: 409 SLMTCDG--AEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFL 466
           SL+ CDG  A+DVIIAVNSTK+L++ SN  NSLA LGG+LCAKASMLLQNVPPA+LVRFL
Sbjct: 416 SLVNCDGDGADDVIIAVNSTKNLTSTSNHANSLALLGGVLCAKASMLLQNVPPAVLVRFL 475

Query: 467 REHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLE 526
           REHRSEWADFNVDAYSA S+KAG+YAYPGMRPTRFTG QIIMPLGHTIE EELLEV+RLE
Sbjct: 476 REHRSEWADFNVDAYSATSMKAGAYAYPGMRPTRFTGGQIIMPLGHTIEQEELLEVVRLE 535

Query: 527 GHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPL 586
           GHSL QEDAF SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDD PLLPSGFRIIPL
Sbjct: 536 GHSLTQEDAFASRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPL 595

Query: 587 DSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQD 646
           DSKT D+ DTL  HRTLDLTSSLEVG  T+ AAG+ ++ H+TRSVLTIAFQFPF+++LQ+
Sbjct: 596 DSKTGDSKDTLNTHRTLDLTSSLEVGSTTSNAAGELTTFHNTRSVLTIAFQFPFDNSLQE 655

Query: 647 NVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLG 706
           NVA MARQYVRSVISSVQRVAMAI PSGLSP++GPKLSPGSPEA TLAHWICQSYSYH+G
Sbjct: 656 NVANMARQYVRSVISSVQRVAMAISPSGLSPSVGPKLSPGSPEAQTLAHWICQSYSYHVG 715

Query: 707 AELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
            ELLR DS+GGDS+LK+LW H DAILCCSLK
Sbjct: 716 GELLRPDSLGGDSLLKHLWHHQDAILCCSLK 746


>gi|356542621|ref|XP_003539765.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform 2
           [Glycine max]
          Length = 844

 Score = 1327 bits (3435), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/748 (86%), Positives = 690/748 (92%), Gaps = 18/748 (2%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAM + Q ++    SSSGSI+KH LD+GKYVRYTAEQVEALERVY+ECPKPSSLRRQQLI
Sbjct: 1   MAMAVAQHRE---SSSSGSIDKH-LDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLI 56

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS
Sbjct: 57  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 116

Query: 121 QLVCENGYMKQQLRT-APATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKA 179
           QLVCENG+M+QQL T + ATTDASCDSVVTTPQH++RDANNPAGLLSIAEETL EFLSKA
Sbjct: 117 QLVCENGFMRQQLHTPSAATTDASCDSVVTTPQHTMRDANNPAGLLSIAEETLTEFLSKA 176

Query: 180 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD 239
           TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD
Sbjct: 177 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD 236

Query: 240 CRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG 299
           CRSLEVFTMFPAGN GTIEL+YTQ YAPTTLAPARDFWTLRYTT+L+NGSLVVCERSLSG
Sbjct: 237 CRSLEVFTMFPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSG 296

Query: 300 SGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 359
           SG GPNPA+AAQFVRAE LPSG LIRPC+GGGSIIHIVDHLNLEAWSVPEVLRPLYESSK
Sbjct: 297 SGTGPNPAAAAQFVRAETLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 356

Query: 360 VVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS 409
           VVAQ+MTIA          ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW+
Sbjct: 357 VVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWT 416

Query: 410 LMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH 469
           ++ CDGAEDV IAVNSTK+LS  SNP +SL FLGGILCAKASMLLQNVPPA+LVRFLREH
Sbjct: 417 VLNCDGAEDVFIAVNSTKNLSGTSNPASSLTFLGGILCAKASMLLQNVPPAVLVRFLREH 476

Query: 470 RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHS 529
           RSEWADF+VDAYSAASLKAG+YAYPGMRPTRFTGSQIIMPLGHTIEHEE+LEVIRLEGHS
Sbjct: 477 RSEWADFSVDAYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHS 536

Query: 530 LAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSK 589
           LAQEDAFVSRDIHLLQICSG+DENAVGACSELVFAPIDEMFPDD PL+PSGFRIIPLDSK
Sbjct: 537 LAQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLIPSGFRIIPLDSK 596

Query: 590 TPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVA 649
                 ++  +RTLDLTS  EVGPAT  A  D+SS  +TRSVLTIAFQFPF+S+LQDNVA
Sbjct: 597 PVKFCSSV--NRTLDLTSGFEVGPATT-AGTDASSSQNTRSVLTIAFQFPFDSSLQDNVA 653

Query: 650 TMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAEL 709
            MARQYVRSVISSVQRVAMAI PSG+SP++G KLSPGSPEA+TLAHWICQSYSY++G++L
Sbjct: 654 VMARQYVRSVISSVQRVAMAISPSGISPSVGAKLSPGSPEAVTLAHWICQSYSYYIGSDL 713

Query: 710 LRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           LRSDS+ GD +LK LW H DAILCCSLK
Sbjct: 714 LRSDSLVGDMMLKQLWHHQDAILCCSLK 741


>gi|60327621|gb|AAX19050.1| class III HD-Zip protein 1 [Populus trichocarpa]
          Length = 855

 Score = 1308 bits (3385), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 647/756 (85%), Positives = 687/756 (90%), Gaps = 22/756 (2%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAM +  Q ++   S SGS+NKH  DNGKYVRYT+EQVEALERVY+ECPKPSSLRRQQLI
Sbjct: 1   MAMAVAPQHRE--SSGSGSLNKHLTDNGKYVRYTSEQVEALERVYAECPKPSSLRRQQLI 58

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPIL+NIEPKQIKVWFQNRRCREKQRKE+SRLQTVNRKLTAMNKLLMEENDRLQKQVS
Sbjct: 59  RECPILANIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVS 118

Query: 121 QLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 180
           QLVCENG+M+QQL+TAPA  DASCDS VTTPQHSLRDANNPAGLLS+AEETLAEFLSKAT
Sbjct: 119 QLVCENGFMQQQLQTAPAAADASCDSAVTTPQHSLRDANNPAGLLSLAEETLAEFLSKAT 178

Query: 181 GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDC 240
           GTAVDWVQMPGMKPGPDSVGIFAISQ CSGVAARACGLVSLEPTK+AEILKDR SWFRDC
Sbjct: 179 GTAVDWVQMPGMKPGPDSVGIFAISQRCSGVAARACGLVSLEPTKLAEILKDRQSWFRDC 238

Query: 241 RSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS 300
           R+LEVFT+FPAGN GTIELLY+Q YAPTTLAPARDFWTLRYT  L+NGSLVVCERSLSGS
Sbjct: 239 RNLEVFTVFPAGNGGTIELLYSQIYAPTTLAPARDFWTLRYTINLENGSLVVCERSLSGS 298

Query: 301 GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV 360
           GAGPN A+AAQFVRAEMLPSG LIRPC+GGGSIIHIVDHLNL+AWSVPEVLRPLYESSK 
Sbjct: 299 GAGPNAAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPLYESSKA 358

Query: 361 VAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL 410
           VAQ++TI           ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDA+NGFNDDGWSL
Sbjct: 359 VAQKVTITALRHVRQIAHETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSL 418

Query: 411 MTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHR 470
           M  DGAEDVIIAVN+TK+L +A+NP +SL+FLGGILCAKASMLLQNVPPA+LVRFLREHR
Sbjct: 419 MNSDGAEDVIIAVNTTKNLISANNPAHSLSFLGGILCAKASMLLQNVPPAVLVRFLREHR 478

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 530
           SEWADF+VDAYSAASLKAGSYAYPGMR  RFTGSQIIMPLGHTIE EELLEVIRLEGHS 
Sbjct: 479 SEWADFSVDAYSAASLKAGSYAYPGMRSMRFTGSQIIMPLGHTIEQEELLEVIRLEGHSF 538

Query: 531 AQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
           AQEDAFVSRDIHLLQICSG+DENAVGACSELVFAPIDEMFPDD PLLPSGFR+IPL+SKT
Sbjct: 539 AQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLLPSGFRVIPLESKT 598

Query: 591 PDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
            D  + LT +RTLDLTSSLEVGP TN A+ D SSC H RSVLTIAFQFPFESNLQDNVAT
Sbjct: 599 KDAQEALTTNRTLDLTSSLEVGPVTNHASVDGSSC-HLRSVLTIAFQFPFESNLQDNVAT 657

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSY--------- 701
           MARQYVRSVISSVQRVA AI PSGL+P LGPKLS GSPEALTLAHWICQSY         
Sbjct: 658 MARQYVRSVISSVQRVATAISPSGLNPALGPKLSAGSPEALTLAHWICQSYWQVLPQVSS 717

Query: 702 SYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
            YHLGAELLRSDSVGGDSVLK+LW H DAILCCSL+
Sbjct: 718 CYHLGAELLRSDSVGGDSVLKHLWHHPDAILCCSLE 753


>gi|45775302|gb|AAS77254.1| class III HD-Zip protein [Populus tremula x Populus alba]
          Length = 843

 Score = 1307 bits (3382), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/747 (86%), Positives = 686/747 (91%), Gaps = 13/747 (1%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAM +  Q ++   SSSGS+NKH  DNGKYVRYT+EQVEALERVY+ECPKPSSLRRQQLI
Sbjct: 1   MAMAVAPQHRE--SSSSGSLNKHLADNGKYVRYTSEQVEALERVYAECPKPSSLRRQQLI 58

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPIL+NIEPKQIKVWFQNRRCREKQRKE+SRLQTVNRKLTAMNKLLMEENDRLQKQVS
Sbjct: 59  RECPILANIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVS 118

Query: 121 QLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 180
           QLVCENG+M+QQL+TAPA  DASCDS VTTPQHSLRDAN+PAGLLS+AEETLAEFLSKAT
Sbjct: 119 QLVCENGFMQQQLQTAPAAADASCDSAVTTPQHSLRDANDPAGLLSLAEETLAEFLSKAT 178

Query: 181 GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDC 240
           GTAVDWVQMPGMKPGPDSVGIFAISQ CSGVAARACGLVSLEPTK+AEILKDR S FRDC
Sbjct: 179 GTAVDWVQMPGMKPGPDSVGIFAISQRCSGVAARACGLVSLEPTKLAEILKDRQSRFRDC 238

Query: 241 RSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS 300
           R+LE FTMFPAGN GTIELLY Q YAPTTLAPARDFWTLRYT +L+NGSLVVC+RSLSGS
Sbjct: 239 RNLEPFTMFPAGNGGTIELLYRQIYAPTTLAPARDFWTLRYTISLENGSLVVCDRSLSGS 298

Query: 301 GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV 360
           GAGPN A+AAQFVRAEMLPSG LIRPC+GGGSIIHIVDHLNL+AWSVPEVLRPLYESSK 
Sbjct: 299 GAGPNAAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPLYESSKA 358

Query: 361 VAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL 410
           VAQ++TI           ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDA+NGFNDDGWSL
Sbjct: 359 VAQKVTITALRHVRQIAHETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSL 418

Query: 411 MTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHR 470
           M  DGAEDVIIAVN+TK+L +A+NP +SL+FLGGILCAKASMLLQNVPPA+LVRFLREHR
Sbjct: 419 MNSDGAEDVIIAVNTTKNLISANNPAHSLSFLGGILCAKASMLLQNVPPAVLVRFLREHR 478

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 530
           SEWADF+VDAYSAASLKAGSYAYPGMR  RFTGSQIIMPLGHTIE EELLEVIRLEGHS 
Sbjct: 479 SEWADFSVDAYSAASLKAGSYAYPGMRSMRFTGSQIIMPLGHTIEQEELLEVIRLEGHSF 538

Query: 531 AQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
           AQEDAFVSRDIHLLQICSG+DENAVGACSELVFAPIDEMFPDD PLLPSGFR+IPL+SKT
Sbjct: 539 AQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLLPSGFRVIPLESKT 598

Query: 591 PDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
            D  + LT +RTLDLTSSLEVGP TN A+ D SSC H RSVLTIAFQFPFESNLQDNVAT
Sbjct: 599 KDAQEALTTNRTLDLTSSLEVGPVTNHASVDGSSC-HLRSVLTIAFQFPFESNLQDNVAT 657

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELL 710
           MARQYVRSVISSVQRVA AI PSGL+P LGPKLS GSPEALTLAHWICQSY YHLGAELL
Sbjct: 658 MARQYVRSVISSVQRVATAISPSGLNPALGPKLSAGSPEALTLAHWICQSYCYHLGAELL 717

Query: 711 RSDSVGGDSVLKNLWQHSDAILCCSLK 737
           RSDSVGGDSVLK+LW H DAILCCSL+
Sbjct: 718 RSDSVGGDSVLKHLWHHPDAILCCSLE 744


>gi|449522211|ref|XP_004168121.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Cucumis
           sativus]
          Length = 841

 Score = 1302 bits (3369), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/749 (84%), Positives = 671/749 (89%), Gaps = 19/749 (2%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAM I       RESS+GSI +H   +GKYVRYT+EQVEALERVY+ECPKPSSLRRQQL+
Sbjct: 1   MAMAIAHH----RESSTGSITRHLDSSGKYVRYTSEQVEALERVYAECPKPSSLRRQQLV 56

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           R+CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKL AMNKLLMEENDRLQKQVS
Sbjct: 57  RDCPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVS 116

Query: 121 QLVCENGYMKQQLRTAPA--TTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSK 178
           QLVCENG+M+QQL T PA  T DASCDSVVTTPQ S RDANNPAGLLSIAEETLAEFLSK
Sbjct: 117 QLVCENGFMRQQLHTVPAAATADASCDSVVTTPQPSRRDANNPAGLLSIAEETLAEFLSK 176

Query: 179 ATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFR 238
           ATGTAVDWVQMPGMKPGPDSVGIFAISQSC GVAARACGLVSLEP+KIAEILKDRPSWFR
Sbjct: 177 ATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPSKIAEILKDRPSWFR 236

Query: 239 DCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS 298
           DCRSLEVFTMFPAGN GTIEL+YTQ YAPTTLAPARDFWTLRYT TL+NGSLVVCERSLS
Sbjct: 237 DCRSLEVFTMFPAGNGGTIELVYTQVYAPTTLAPARDFWTLRYTITLENGSLVVCERSLS 296

Query: 299 GSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS 358
           GSGAGP+ A+AAQFVRAEMLPSG LIRPC+GGGSIIHIVDHLNLEAW VPEVLRPLYESS
Sbjct: 297 GSGAGPSEAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWHVPEVLRPLYESS 356

Query: 359 KVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW 408
           KVVAQ+MTIA          ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFND+GW
Sbjct: 357 KVVAQKMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDNGW 416

Query: 409 SLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE 468
           SL+ C+GAEDV++ VNSTK+  T SNP NSL + GG+LCAKASMLLQNVPPA+LVRFLRE
Sbjct: 417 SLINCEGAEDVVLTVNSTKNFGTTSNPANSLTYPGGVLCAKASMLLQNVPPAVLVRFLRE 476

Query: 469 HRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH 528
           HRSEWADFN+DAYSAA+LKA SY YPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH
Sbjct: 477 HRSEWADFNIDAYSAATLKANSYTYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH 536

Query: 529 SLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS 588
            + QEDAFVSRDIHLLQICSG+DENAVGACSEL+FAPIDEMFPDD PLLPSGFRIIPLDS
Sbjct: 537 PMVQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLLPSGFRIIPLDS 596

Query: 589 KTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNV 648
           +T D   +    RTLDLTSSLEVG  T+  AGD+SS    RSVLTIAFQFPFES++QDNV
Sbjct: 597 RTSDAKGS---QRTLDLTSSLEVGSGTSNTAGDASSSQSARSVLTIAFQFPFESSMQDNV 653

Query: 649 ATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAE 708
           A MA QYVRSVISSVQRVAMAI PSG  P LGPKLSPGSPEALTLAHWIC+SYS  LG E
Sbjct: 654 ANMAHQYVRSVISSVQRVAMAISPSGGGPALGPKLSPGSPEALTLAHWICKSYSLQLGTE 713

Query: 709 LLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           L++SDS+ GDS+LKNLW H DAILCCSLK
Sbjct: 714 LIKSDSLEGDSLLKNLWNHQDAILCCSLK 742


>gi|63115354|gb|AAY33856.1| class III HD-zip protein [Gossypium barbadense]
          Length = 836

 Score = 1289 bits (3335), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/750 (84%), Positives = 676/750 (90%), Gaps = 21/750 (2%)

Query: 3   MVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRE 62
           M +       RESS   I+KH LD GKYVRYTAEQVEALERVY+ECPKPSSLRRQQLIRE
Sbjct: 1   MAMAMTHHHNRESS---IDKH-LDTGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRE 56

Query: 63  CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           CPILSNIEPKQ K  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL
Sbjct: 57  CPILSNIEPKQFKALFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 116

Query: 123 VCENGYMKQQLRTAPAT-TDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATG 181
           VCENGYM+QQL T  A+ TDASCDS VTTPQHSLR+ANNPAGLLSIAEETLAEFLSKATG
Sbjct: 117 VCENGYMRQQLHTVNASATDASCDSAVTTPQHSLRNANNPAGLLSIAEETLAEFLSKATG 176

Query: 182 TAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCR 241
           TAV+WVQMPGMKPGPDSVGIFA SQSCSG+AARACGLVSLEPTKIAEILKDRPSWFRDCR
Sbjct: 177 TAVNWVQMPGMKPGPDSVGIFATSQSCSGMAARACGLVSLEPTKIAEILKDRPSWFRDCR 236

Query: 242 SLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSG 301
            LEVFTMFPAGN GTIEL+YTQ +APTTLAPARDFWTLRYTTTL+NGSLVVCERSLSGSG
Sbjct: 237 KLEVFTMFPAGNGGTIELVYTQMFAPTTLAPARDFWTLRYTTTLENGSLVVCERSLSGSG 296

Query: 302 AGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVV 361
           AGP+ ASAAQFVRAE+LPSG LIRPC+GGGSIIHIVDHLNLEAWSVPEVLRPLYESS+V+
Sbjct: 297 AGPSVASAAQFVRAEVLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRVI 356

Query: 362 AQRMTI----------AETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLM 411
           AQ+MTI           ETSGEVVY LGRQPAVLRTFSQRLSRGFN+A+NGFN+DGWS+M
Sbjct: 357 AQKMTIPALRYVRQIAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNEAINGFNEDGWSIM 416

Query: 412 TCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRS 471
            CDG EDVIIA+NS KSLS +SN T  L+FLGG+LCAKASMLLQNVPPA+LVRFLREHR 
Sbjct: 417 NCDGTEDVIIAINSGKSLSNSSNLTTGLSFLGGVLCAKASMLLQNVPPAVLVRFLREHRL 476

Query: 472 EWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLA 531
           EWADFNVDAYSAASLKAG+Y YPGMRPT FTGSQIIMPLG T+EHEELLEVIRLEG SL 
Sbjct: 477 EWADFNVDAYSAASLKAGTYTYPGMRPTSFTGSQIIMPLGQTVEHEELLEVIRLEGQSLT 536

Query: 532 QEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTP 591
           QEDA +SRDIHLLQICSG+D+NAVGACSELVFAPIDEMFPDD  LLPSGFRIIPL+SK  
Sbjct: 537 QEDALLSRDIHLLQICSGIDDNAVGACSELVFAPIDEMFPDDAALLPSGFRIIPLESK-- 594

Query: 592 DTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
             PD+L  +RTLDLTSSLEVGPAT+ AAGDS S  + RSVLTIAFQFPF++NL+DNVATM
Sbjct: 595 --PDSLATNRTLDLTSSLEVGPATSQAAGDSPS-QNARSVLTIAFQFPFDTNLRDNVATM 651

Query: 652 ARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLR 711
           ARQYVRSVISSVQR AMAI P G SPT+GPK SPGSPEALTLAHWICQSYS+HLG ELL+
Sbjct: 652 ARQYVRSVISSVQRXAMAISPCGSSPTIGPKPSPGSPEALTLAHWICQSYSFHLGEELLK 711

Query: 712 SDSVGGDSVLKNLWQHSDAILCCSLK-VPL 740
           S+S+GGDSVLKNLWQH DAILCCSLK VP+
Sbjct: 712 SESLGGDSVLKNLWQHQDAILCCSLKSVPV 741


>gi|18076736|emb|CAC84906.1| HD-Zip protein [Zinnia violacea]
          Length = 835

 Score = 1288 bits (3332), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/735 (83%), Positives = 668/735 (90%), Gaps = 12/735 (1%)

Query: 15  SSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQI 74
           + + SI KHQLDNGKYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPILSNIEPKQI
Sbjct: 2   NDNNSITKHQLDNGKYVRYTTEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQI 61

Query: 75  KVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR 134
           KVWFQNRRCREKQRKE+SRLQTVN+KL+AMNKLLMEENDRLQKQVSQLVCENGYM+QQ+ 
Sbjct: 62  KVWFQNRRCREKQRKESSRLQTVNKKLSAMNKLLMEENDRLQKQVSQLVCENGYMRQQMH 121

Query: 135 TAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP 194
           T  A TDASC+SVV TPQHSLRDA NPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP
Sbjct: 122 TGSAATDASCESVVNTPQHSLRDATNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP 181

Query: 195 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNA 254
           GPDSVGIFAISQSCSGVAARACGLVSLEPTKI EILKDRPSWFRDCRSLEVFTMFPAGN 
Sbjct: 182 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNG 241

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           GTIEL+Y Q +APTTLAPARDFWTLRYTT+LDNGSLVVCERSLSGSGAGPNPA+ AQFVR
Sbjct: 242 GTIELVYMQTFAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGSGAGPNPAAVAQFVR 301

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ 368
            EMLPSG LIRPC+GGGS+IHIVDHLNLEAWSVPEVLRPLYESSKVVAQ+MTIA      
Sbjct: 302 GEMLPSGYLIRPCEGGGSVIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIR 361

Query: 369 ----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
               E+SGEVVYGLGRQPAVLRT SQRLSRGFNDA+NGF+DDGWSLM CDG EDVIIAVN
Sbjct: 362 QIAQESSGEVVYGLGRQPAVLRTLSQRLSRGFNDAINGFSDDGWSLMNCDGVEDVIIAVN 421

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAA 484
           STK+L+ + NP+NS+++LGGILCAKASML Q+VPPA+LVRFLREHRSEWADFNVDAYSAA
Sbjct: 422 STKNLNNSMNPSNSISYLGGILCAKASMLFQDVPPAVLVRFLREHRSEWADFNVDAYSAA 481

Query: 485 SLKAGS-YAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
           S+KA S   YPGMRPTRFTGSQIIMPLGHTIEHEE+LEV+RLEGH+L QED F SRDIHL
Sbjct: 482 SVKANSCNTYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHALGQEDPFTSRDIHL 541

Query: 544 LQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTL-TAHRT 602
           LQ+C+G+DENAVGACSELVFAPIDEMFPDD PL+PSGFRIIPLD K+    + L T HRT
Sbjct: 542 LQLCNGIDENAVGACSELVFAPIDEMFPDDAPLVPSGFRIIPLDPKSGGGKNALVTTHRT 601

Query: 603 LDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISS 662
           LDLTSSL+V PA N  + D S+C  +RSVLTIAFQFPFE+NL ++VATMARQYVRSVI+S
Sbjct: 602 LDLTSSLDVTPANNHGSTDLSTCQTSRSVLTIAFQFPFENNLAESVATMARQYVRSVINS 661

Query: 663 VQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLK 722
           VQRVAMAI PSGLSP +GPK SP SPEA+TLA WICQSY+YHLGA+LL S S+ GDS+LK
Sbjct: 662 VQRVAMAISPSGLSPCVGPKPSPTSPEAVTLAQWICQSYTYHLGADLLSSGSLVGDSLLK 721

Query: 723 NLWQHSDAILCCSLK 737
           +LWQH DAILCCSLK
Sbjct: 722 DLWQHQDAILCCSLK 736


>gi|24417151|dbj|BAC22514.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 848

 Score = 1281 bits (3315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/750 (82%), Positives = 675/750 (90%), Gaps = 14/750 (1%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAM ++ QQ ++  S + SI KHQLDNGKYVRYT EQVEALERVY+ECPKPSSLRRQQLI
Sbjct: 1   MAMAVEHQQYKEI-SGNNSITKHQLDNGKYVRYTTEQVEALERVYAECPKPSSLRRQQLI 59

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKE+SRLQTVN+KL+AMNKLLMEENDRLQKQVS
Sbjct: 60  RECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNKKLSAMNKLLMEENDRLQKQVS 119

Query: 121 QLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 180
           QLVCENGYM+QQL T  A TDASC+SV+TTPQ SLRDANNPAGLLSIAEETLAEFLSKAT
Sbjct: 120 QLVCENGYMRQQLHTGSAATDASCESVLTTPQQSLRDANNPAGLLSIAEETLAEFLSKAT 179

Query: 181 GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDC 240
           GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKI EILKDRPSWFRDC
Sbjct: 180 GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIVEILKDRPSWFRDC 239

Query: 241 RSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS 300
           R+LEVFTMFPAGN GTIEL+YTQ +APTTLAPARDFWTLRYTTTL+NGSLVVCERSLSGS
Sbjct: 240 RNLEVFTMFPAGNGGTIELVYTQIFAPTTLAPARDFWTLRYTTTLENGSLVVCERSLSGS 299

Query: 301 GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV 360
           GAGPNPA+A+QFVR EMLPSG LIRPC+GGGSI+HIVDHLNLEAWSVPEVLRPLYESSKV
Sbjct: 300 GAGPNPAAASQFVRGEMLPSGYLIRPCEGGGSIVHIVDHLNLEAWSVPEVLRPLYESSKV 359

Query: 361 VAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL 410
           VAQ+MTIA          E+SGEVVYG+GRQPAVLRT SQRLSRGFNDAVNGF+DDGWSL
Sbjct: 360 VAQKMTIAALRYIRQIAQESSGEVVYGVGRQPAVLRTLSQRLSRGFNDAVNGFSDDGWSL 419

Query: 411 MTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHR 470
           M CDGAEDVI+AVNSTK+L+ + N + S  +LGGI+CAKASML +NVPP +LVRFLREHR
Sbjct: 420 MNCDGAEDVIVAVNSTKNLNNSMNSSTSPPYLGGIICAKASMLFENVPPGVLVRFLREHR 479

Query: 471 SEWADFNVDAYSAASLKAGSY-AYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHS 529
           SEWADFNVDAYSAAS+KA  Y  YPGMRPTRFTGSQIIMPLGHTIEHEE+LEV+RLEG +
Sbjct: 480 SEWADFNVDAYSAASVKANPYNTYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGQA 539

Query: 530 LAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSK 589
           L QED F+SRDIHLLQ+C+G+DEN+VGACSEL+FAPIDEMFPDD PL+PSGFRIIPLD K
Sbjct: 540 LGQEDPFMSRDIHLLQLCNGIDENSVGACSELIFAPIDEMFPDDAPLIPSGFRIIPLDPK 599

Query: 590 TPDTPDTL-TAHR-TLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDN 647
           + D  + L T HR TLDLTSSL+V P  N  + D S+C  TRSVLTI FQFPFE++L ++
Sbjct: 600 SVDAKNALVTTHRTTLDLTSSLDVTPTPNHGSTDVSTCQTTRSVLTITFQFPFENSLAES 659

Query: 648 VATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGA 707
           VATMARQYVRSVI+SVQRVAMAI PSGLSP +GPK SPGSPEALTLA WICQSY YHLGA
Sbjct: 660 VATMARQYVRSVINSVQRVAMAISPSGLSPCVGPKPSPGSPEALTLAQWICQSYMYHLGA 719

Query: 708 ELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           +LL S SV G+S+LK+LWQH DAILCCSLK
Sbjct: 720 DLLSSGSVVGESLLKDLWQHQDAILCCSLK 749


>gi|109729905|tpg|DAA05766.1| TPA_inf: class III HD-Zip protein REV1 [Lotus japonicus]
          Length = 841

 Score = 1278 bits (3306), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/743 (82%), Positives = 669/743 (90%), Gaps = 16/743 (2%)

Query: 11  QQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           Q RESS   I++H   +GKYVRYTA QVEALERVY+ECPKPSSLRRQQLIRECP+L+N+E
Sbjct: 7   QDRESS---IDRHLDSSGKYVRYTAGQVEALERVYTECPKPSSLRRQQLIRECPVLANVE 63

Query: 71  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMK 130
           PKQIKVWFQNRRCREKQRKEASRLQ VNRKL AMNKLLMEENDRLQKQVSQLVCENG+M+
Sbjct: 64  PKQIKVWFQNRRCREKQRKEASRLQAVNRKLNAMNKLLMEENDRLQKQVSQLVCENGFMR 123

Query: 131 QQLR--TAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQ 188
           QQL+  +A  TTD + DSV TT ++S+RDAN+PAG LSIAEETLAEFLSKATGTAVDWVQ
Sbjct: 124 QQLQAPSAAGTTDGNGDSVATTSRNSMRDANSPAGFLSIAEETLAEFLSKATGTAVDWVQ 183

Query: 189 MPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTM 248
           +PGMKPGPDSVGIF ISQSCSGVAARACGLVSLEP K+AEILKDR SWFRDCRSLEVFTM
Sbjct: 184 LPGMKPGPDSVGIFTISQSCSGVAARACGLVSLEPNKVAEILKDRLSWFRDCRSLEVFTM 243

Query: 249 FPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPAS 308
           FPAGN GTIEL+YTQ YAP TL+PARDFWTLRYTTTL+NGSLVVCERSLSGSGAGPN A+
Sbjct: 244 FPAGNGGTIELVYTQTYAPMTLSPARDFWTLRYTTTLENGSLVVCERSLSGSGAGPNAAA 303

Query: 309 AAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA 368
           A QFVRAEMLPSG LIRPC+GGGSIIHIVDHLNL+AWSVPEVLRPLYESSKVVAQRMTIA
Sbjct: 304 AHQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPLYESSKVVAQRMTIA 363

Query: 369 ----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAED 418
                     ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS++ CDGAED
Sbjct: 364 ALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSVLNCDGAED 423

Query: 419 VIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNV 478
           VII+VNSTK+LS  SNP +SL F GG+LCAKASMLLQN+PPA+LVRFLREHRSEWADFNV
Sbjct: 424 VIISVNSTKNLSGTSNPASSLTFAGGVLCAKASMLLQNIPPAVLVRFLREHRSEWADFNV 483

Query: 479 DAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVS 538
           DAYSAASLKAGSYAYPGMRP RFTG+QIIMPLGHTIEHEE+LEVIRLEGHSLAQEDAF S
Sbjct: 484 DAYSAASLKAGSYAYPGMRPMRFTGNQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFAS 543

Query: 539 RDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLT 598
           RD+HLLQ+CSG+DE+AVGAC EL+FAPIDEMFPDD PL+PSGFRIIPLDSK  D  DT+T
Sbjct: 544 RDVHLLQLCSGIDEDAVGACCELIFAPIDEMFPDDAPLVPSGFRIIPLDSKPGDKKDTMT 603

Query: 599 AHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
            ++TL+LTS LEVG +TN  AGD+SSCH+ RSVLTIAFQFPFES+LQDNVA MARQYVRS
Sbjct: 604 TNKTLNLTSGLEVGASTNHTAGDASSCHNNRSVLTIAFQFPFESSLQDNVAVMARQYVRS 663

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           VISSVQ V+MAI PSG +P  G KLS GSPEALTLA W+CQSYSY+LG  LLRSDS+ GD
Sbjct: 664 VISSVQTVSMAISPSGTNPAAGAKLSVGSPEALTLARWVCQSYSYYLGTGLLRSDSLVGD 723

Query: 719 SVLKNLWQHSDAILCCSLK-VPL 740
            VLK+LW H DAILCCSLK VP+
Sbjct: 724 LVLKHLWHHQDAILCCSLKSVPM 746


>gi|224131988|ref|XP_002328157.1| predicted protein [Populus trichocarpa]
 gi|60327623|gb|AAX19051.1| class III HD-Zip protein 2 [Populus trichocarpa]
 gi|222837672|gb|EEE76037.1| predicted protein [Populus trichocarpa]
          Length = 844

 Score = 1276 bits (3302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/742 (84%), Positives = 668/742 (90%), Gaps = 18/742 (2%)

Query: 11  QQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
            +  SSSGSINKH  D+GKYVRYTAEQVEALERVY+ECPKPSSLRRQQLIRECPIL+NIE
Sbjct: 7   HRESSSSGSINKHLTDDGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILANIE 66

Query: 71  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMK 130
           PKQIKVWFQNRRCREKQRKE+SRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENG+M+
Sbjct: 67  PKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMR 126

Query: 131 QQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMP 190
           QQL+T   TTDASCDSVV TPQHSLRDANNPAGLLSIAEETL+EFL+KATGTA++WVQMP
Sbjct: 127 QQLQTV--TTDASCDSVVATPQHSLRDANNPAGLLSIAEETLSEFLAKATGTALEWVQMP 184

Query: 191 GMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFP 250
           GMKPGPDS+GIF+ISQ C GVAARACGLVSLEP KIAEILKDR SWFRDCR+LEVFTMFP
Sbjct: 185 GMKPGPDSIGIFSISQRCGGVAARACGLVSLEPKKIAEILKDRSSWFRDCRNLEVFTMFP 244

Query: 251 AGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAA 310
           AGN GTIEL+Y+Q YAPTTLAPARD WTLRYTT+L+NGSLVVCERSLSG GAGP+ A+AA
Sbjct: 245 AGNGGTIELVYSQIYAPTTLAPARDMWTLRYTTSLENGSLVVCERSLSGYGAGPDAAAAA 304

Query: 311 QFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-- 368
           QFVRAEMLPSG LIRPC+GG SIIHIVDHLNL+AWSVPEVLRPLYESSK VAQ+MTIA  
Sbjct: 305 QFVRAEMLPSGYLIRPCEGG-SIIHIVDHLNLQAWSVPEVLRPLYESSKAVAQKMTIAAL 363

Query: 369 --------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI 420
                   ETSGEVVYGLGRQPAVLRTF+QRLSRGFNDA+NGFNDDGWSLM  DGAEDVI
Sbjct: 364 RYVRQVAHETSGEVVYGLGRQPAVLRTFNQRLSRGFNDAINGFNDDGWSLMNADGAEDVI 423

Query: 421 IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDA 480
           IAVNSTK+L  A+N  +SL+FLGGILCAKASMLLQNV PA+LV FLREH +EWADF+VDA
Sbjct: 424 IAVNSTKNLIGANNSAHSLSFLGGILCAKASMLLQNVHPAVLVCFLREHHAEWADFSVDA 483

Query: 481 YSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRD 540
           YSAA  KAGSYAYPGMRP RFTGSQI MPLGHTIE E+LLEVIRLEGHS AQEDAFVS+D
Sbjct: 484 YSAALWKAGSYAYPGMRPMRFTGSQITMPLGHTIEQEDLLEVIRLEGHSFAQEDAFVSQD 543

Query: 541 IHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAH 600
           IHLLQICSG+DENAVGACSELVFAPIDE FPDD PLLPSGFRII L+SK  DT + LT +
Sbjct: 544 IHLLQICSGIDENAVGACSELVFAPIDETFPDDAPLLPSGFRIISLESKAKDTQEVLTTN 603

Query: 601 RTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVI 660
            TLDLTSSLE G A N  A D SSCH  RSVLTIAFQFPFESNLQDNVATMARQYVRSVI
Sbjct: 604 CTLDLTSSLEAGLAINHTAVDGSSCHSLRSVLTIAFQFPFESNLQDNVATMARQYVRSVI 663

Query: 661 SSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSY-----SYHLGAELLRSDSV 715
           SSVQRVAMAI PSGLSP LGPKLS GSPEALTLAHWICQS+     +YHLGAELLRSDSV
Sbjct: 664 SSVQRVAMAISPSGLSPVLGPKLSAGSPEALTLAHWICQSHRQVLLNYHLGAELLRSDSV 723

Query: 716 GGDSVLKNLWQHSDAILCCSLK 737
           GGDSVLK+LW H DAILCCSLK
Sbjct: 724 GGDSVLKHLWHHPDAILCCSLK 745


>gi|18076740|emb|CAC84277.1| HD-Zip protein [Zinnia violacea]
          Length = 849

 Score = 1271 bits (3290), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/750 (81%), Positives = 669/750 (89%), Gaps = 13/750 (1%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAM ++ Q   +R     +    +LDNGKYVRYT EQVEALERVY+ECPKPSSLRRQQLI
Sbjct: 1   MAMAVEHQASTKRSVVITASQNIKLDNGKYVRYTTEQVEALERVYAECPKPSSLRRQQLI 60

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKE+SRLQTVN+KL+AMNKLLMEENDRLQKQVS
Sbjct: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNKKLSAMNKLLMEENDRLQKQVS 120

Query: 121 QLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 180
           QLVCENGYM+QQL T  A TDASC+SV+TTPQ SLRDANNPAGLLSIAEETLAEFLSKAT
Sbjct: 121 QLVCENGYMRQQLHTGSAATDASCESVLTTPQQSLRDANNPAGLLSIAEETLAEFLSKAT 180

Query: 181 GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDC 240
           GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKI EILKDRPSWFRDC
Sbjct: 181 GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIVEILKDRPSWFRDC 240

Query: 241 RSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS 300
           R+LEVFTMFPAGN GTIEL+YTQ +APTTLAPARDFWTLRYTTTL+NGSLVVCERSLSGS
Sbjct: 241 RNLEVFTMFPAGNGGTIELVYTQIFAPTTLAPARDFWTLRYTTTLENGSLVVCERSLSGS 300

Query: 301 GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV 360
           GAGPNPA+A+QFVR EMLPSG LIRPC+GGGSI+HIVDHLNLEAWSVPEVLRPLYESSKV
Sbjct: 301 GAGPNPAAASQFVRGEMLPSGYLIRPCEGGGSIVHIVDHLNLEAWSVPEVLRPLYESSKV 360

Query: 361 VAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL 410
           VAQ+MTIA          E+SGEVVYG+GRQPAVLRT SQRLSRGFNDAVNGF+DDGWSL
Sbjct: 361 VAQKMTIAALRYIRQIAQESSGEVVYGVGRQPAVLRTLSQRLSRGFNDAVNGFSDDGWSL 420

Query: 411 MTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHR 470
           M CDGAEDVI+AVNSTK+L+ + N + S  +LGGI+CAKASML +NVPP +LVRFLREHR
Sbjct: 421 MNCDGAEDVIVAVNSTKNLNNSMNSSTSPPYLGGIICAKASMLFENVPPGVLVRFLREHR 480

Query: 471 SEWADFNVDAYSAASLKAGSY-AYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHS 529
           SEWADFNVDAYSAAS+KA  Y  YPGMRPTRFTGSQIIMPLGHTIEHEE+LEV+RLEG +
Sbjct: 481 SEWADFNVDAYSAASVKANPYNTYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGQA 540

Query: 530 LAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSK 589
           L QED F+SRDIHLLQ+C+G+DEN+VGACSEL+FAPIDEMFPDD PL+PSGFRIIPLD K
Sbjct: 541 LGQEDPFMSRDIHLLQLCNGIDENSVGACSELIFAPIDEMFPDDAPLIPSGFRIIPLDPK 600

Query: 590 TPDTPDTL-TAHR-TLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDN 647
           + D  + L T HR TLDLTSSL+V P  N  + D S+C  TRSVLTI FQFPFE++L ++
Sbjct: 601 SVDAKNALVTTHRTTLDLTSSLDVTPTPNHGSTDVSTCQTTRSVLTITFQFPFENSLAES 660

Query: 648 VATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGA 707
           VATMARQYVRSVI+SVQRVAMAI PSGLSP +GPK SPGSPEALTLA WICQSY YHLGA
Sbjct: 661 VATMARQYVRSVINSVQRVAMAISPSGLSPCVGPKPSPGSPEALTLAQWICQSYMYHLGA 720

Query: 708 ELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           +LL S SV G+S+LK+LWQH DAILCCSLK
Sbjct: 721 DLLSSGSVVGESLLKDLWQHQDAILCCSLK 750


>gi|15239411|ref|NP_200877.1| homeobox-leucine zipper protein REVOLUTA [Arabidopsis thaliana]
 gi|75203823|sp|Q9SE43.2|REV_ARATH RecName: Full=Homeobox-leucine zipper protein REVOLUTA; AltName:
           Full=HD-ZIP protein REV; AltName: Full=Homeodomain
           transcription factor REV; AltName: Full=Protein
           AMPHIVASAL VASCULAR BUNDLE 1; AltName: Full=Protein
           INTERFASCICULAR FIBERLESS 1
 gi|7229679|gb|AAF42938.1|AF233592_1 REVOLUTA [Arabidopsis thaliana]
 gi|24416437|gb|AAF15262.2|AF188994_1 homeodomain-leucine zipper protein interfascicular fiberless 1
           [Arabidopsis thaliana]
 gi|9759333|dbj|BAB09842.1| Revoluta [Arabidopsis thaliana]
 gi|27413560|gb|AAO11835.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|110738992|dbj|BAF01416.1| REVOLUTA or interfascicular fiberless 1 [Arabidopsis thaliana]
 gi|332009984|gb|AED97367.1| homeobox-leucine zipper protein REVOLUTA [Arabidopsis thaliana]
          Length = 842

 Score = 1264 bits (3271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/738 (83%), Positives = 670/738 (90%), Gaps = 17/738 (2%)

Query: 12  QRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEP 71
            RE SS S+N+H   +GKYVRYTAEQVEALERVY+ECPKPSSLRRQQLIREC IL+NIEP
Sbjct: 8   HRERSSDSMNRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEP 67

Query: 72  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ 131
           KQIKVWFQNRRCR+KQRKEASRLQ+VNRKL+AMNKLLMEENDRLQKQVSQLVCENGYMKQ
Sbjct: 68  KQIKVWFQNRRCRDKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCENGYMKQ 127

Query: 132 QLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           QL T     D SC+SVVTTPQHSLRDAN+PAGLLSIAEETLAEFLSKATGTAVDWVQMPG
Sbjct: 128 QLTTV--VNDPSCESVVTTPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 185

Query: 192 MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA 251
           MKPGPDSVGIFAISQ C+GVAARACGLVSLEP KIAEILKDRPSWFRDCRSLEVFTMFPA
Sbjct: 186 MKPGPDSVGIFAISQRCNGVAARACGLVSLEPMKIAEILKDRPSWFRDCRSLEVFTMFPA 245

Query: 252 GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQ 311
           GN GTIEL+Y Q YAPTTLAPARDFWTLRYTT+LDNGS VVCERSLSGSGAGPN ASA+Q
Sbjct: 246 GNGGTIELVYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQ 305

Query: 312 FVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--- 368
           FVRAEML SG LIRPCDGGGSIIHIVDHLNLEAWSVP+VLRPLYESSKVVAQ+MTI+   
Sbjct: 306 FVRAEMLSSGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALR 365

Query: 369 -------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVII 421
                  E++GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGF DDGWS M CDGAED+I+
Sbjct: 366 YIRQLAQESNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIV 425

Query: 422 AVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           A+NSTK L   +N +NSL+FLGG+LCAKASMLLQNVPPA+L+RFLREHRSEWADFNVDAY
Sbjct: 426 AINSTKHL---NNISNSLSFLGGVLCAKASMLLQNVPPAVLIRFLREHRSEWADFNVDAY 482

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
           SAA+LKAGS+AYPGMRPTRFTGSQIIMPLGHTIEHEE+LEV+RLEGHSLAQEDAF+SRD+
Sbjct: 483 SAATLKAGSFAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDV 542

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA-H 600
           HLLQIC+G+DENAVGACSEL+FAPI+EMFPDD PL+PSGFR+IP+D+KT D  D LTA H
Sbjct: 543 HLLQICTGIDENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANH 602

Query: 601 RTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVI 660
           RTLDLTSSLEVGP+   A+G+S S   +R +LTIAFQFPFE+NLQ+NVA MA QYVRSVI
Sbjct: 603 RTLDLTSSLEVGPSPENASGNSFSSSSSRCILTIAFQFPFENNLQENVAGMACQYVRSVI 662

Query: 661 SSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGG-DS 719
           SSVQRVAMAI PSG+SP+LG KLSPGSPEA+TLA WI QSYS+HLG+ELL  DS+G  DS
Sbjct: 663 SSVQRVAMAISPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSELLTIDSLGSDDS 722

Query: 720 VLKNLWQHSDAILCCSLK 737
           VLK LW H DAILCCSLK
Sbjct: 723 VLKLLWDHQDAILCCSLK 740


>gi|24417149|dbj|BAC22513.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 846

 Score = 1261 bits (3264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/729 (82%), Positives = 654/729 (89%), Gaps = 16/729 (2%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LDNGKYVRYTAEQVEALERVY+ECPKPSSL+RQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 29  LDNGKYVRYTAEQVEALERVYAECPKPSSLKRQQLIRECPILSNIEPKQIKVWFQNRRCR 88

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           EKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV ENGYM+QQL TA + TDASC
Sbjct: 89  EKQRKEASRLQMVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYMRQQLHTAQSVTDASC 148

Query: 145 DSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAI 204
           +S VTTPQHSLRDANNPAGLLSIAEETL EFLSKATGTAVDWVQMPGMKPGPDSVGIFAI
Sbjct: 149 ESAVTTPQHSLRDANNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPDSVGIFAI 208

Query: 205 SQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQA 264
           SQSCSGVAARACGLVSLEPTKI EILKDR SWFRDCR+LEV TM PAGN GTIEL+YTQ 
Sbjct: 209 SQSCSGVAARACGLVSLEPTKIVEILKDRTSWFRDCRNLEVLTMLPAGNGGTIELVYTQV 268

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
           YAPTTLAPARDFWTLRYTT+L+NGSLVVCERSLSG G GPN A+A+QFVR EMLPSG LI
Sbjct: 269 YAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGPGGGPNAAAASQFVRGEMLPSGYLI 328

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEV 374
           RPCDGGGSIIHIVDHLNLE WS PEVLRPLYESSKVVAQ+MTIA          E+SGEV
Sbjct: 329 RPCDGGGSIIHIVDHLNLEPWSAPEVLRPLYESSKVVAQKMTIAALRYIRQIAQESSGEV 388

Query: 375 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
           VYGLGRQPA+LRT SQRLSRGFNDA+NGFNDDGWSLM CDGAEDVI+++NSTK+L+T++N
Sbjct: 389 VYGLGRQPAILRTLSQRLSRGFNDAINGFNDDGWSLMNCDGAEDVIVSINSTKNLNTSTN 448

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYP 494
            +N L+FLGG+LCAKASML  NVPPA+LVRFLREHRSEWADFNVDAYSAAS+KA  Y Y 
Sbjct: 449 SSNPLSFLGGVLCAKASMLFHNVPPAVLVRFLREHRSEWADFNVDAYSAASVKASPYGYQ 508

Query: 495 GMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENA 554
           G+RPTRFTGSQ+IMPLG TIEHEE+LEVIRLEGH++ QED FVSRDIHLLQ+CSG+DENA
Sbjct: 509 GIRPTRFTGSQVIMPLGQTIEHEEMLEVIRLEGHAVGQEDPFVSRDIHLLQLCSGIDENA 568

Query: 555 VGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTL-TAHRTLDLTSSLEVGP 613
           VGACSELVFAPIDEMFPDD PL+PSGFRIIPL+ K+ D  D   T HRTLDLTSSLEVG 
Sbjct: 569 VGACSELVFAPIDEMFPDDAPLIPSGFRIIPLEPKSGDPKDAAGTTHRTLDLTSSLEVGQ 628

Query: 614 ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPS 673
           +TN  + D     + RSVLTIAFQFPFE+NL D+VATMARQYVRSVI+SVQRVAMAI PS
Sbjct: 629 STNHGSSD-----NMRSVLTIAFQFPFENNLADSVATMARQYVRSVINSVQRVAMAISPS 683

Query: 674 GLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILC 733
           GLSP+L PKLSP SPEALTLA WICQSY+YHLG +LL S SV GDS+LK+LWQH DAILC
Sbjct: 684 GLSPSLAPKLSPSSPEALTLAQWICQSYTYHLGTDLLTSGSVVGDSLLKDLWQHQDAILC 743

Query: 734 CSLKVPLQF 742
           CSLK P  F
Sbjct: 744 CSLKSPPVF 752


>gi|297793627|ref|XP_002864698.1| hypothetical protein ARALYDRAFT_496218 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310533|gb|EFH40957.1| hypothetical protein ARALYDRAFT_496218 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 844

 Score = 1259 bits (3259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/739 (82%), Positives = 671/739 (90%), Gaps = 17/739 (2%)

Query: 12  QRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEP 71
            RE SS S+N+H   +GKYVRYTAEQVEALERVY+ECPKPSSLRRQQLIREC IL+NIEP
Sbjct: 8   HRERSSDSMNRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEP 67

Query: 72  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ 131
           KQIKVWFQNRRCR+KQRKEASRLQ+VNRKL+AMNKLLMEENDRLQKQVSQLVCENGYMKQ
Sbjct: 68  KQIKVWFQNRRCRDKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCENGYMKQ 127

Query: 132 QLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           QL T     D SC+SVVTTPQHSLRDA++PAGL+SIAEETLAEFLSKATGTAVDWVQMPG
Sbjct: 128 QLTTV-VCNDPSCESVVTTPQHSLRDASSPAGLISIAEETLAEFLSKATGTAVDWVQMPG 186

Query: 192 MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA 251
           MKPGPDSVGIFAISQ CSGVAARACGLVSLEP KIAEILKDRPSWFRDCRSLEVFT+FPA
Sbjct: 187 MKPGPDSVGIFAISQRCSGVAARACGLVSLEPMKIAEILKDRPSWFRDCRSLEVFTLFPA 246

Query: 252 GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQ 311
           GN GTIEL+Y Q YAPTTLAPARDFWTLRYTT+LDNGS VVCERSLSGSGAGPN ASA+Q
Sbjct: 247 GNGGTIELVYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQ 306

Query: 312 FVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--- 368
           FVRAEML SG LIRPCDGGGSIIHIVDHLNLEAWSVP+VLRPLYESSKVVAQ+MTI+   
Sbjct: 307 FVRAEMLSSGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALR 366

Query: 369 -------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVII 421
                  ET+GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGF DDGWS M CDGAED+I+
Sbjct: 367 YIRQLAQETNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIV 426

Query: 422 AVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           A+NSTK L   +N +NSL+FLGG+LCAKASMLLQNVPPA+L+RFLREHRSEWADFNVDAY
Sbjct: 427 AINSTKHL---NNISNSLSFLGGVLCAKASMLLQNVPPAVLIRFLREHRSEWADFNVDAY 483

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
           SAA+LKAG++AYPGMRPTRFTGSQIIMPLGHTIEHEE+LEV+RLEGHSLAQEDAF+SRD+
Sbjct: 484 SAATLKAGTFAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDV 543

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA-H 600
           HLLQIC+G+DENAVGACSEL+FAPI+EMFPDD PL+PSGFR+IP+D+KT D  D LTA H
Sbjct: 544 HLLQICTGIDENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDAQDLLTANH 603

Query: 601 RTLDLTSSLEVGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           RTLDLTSSLEVGP+   A+G+ SSS   +R +LTIAFQFPFE+NLQ+NVA MA QYVRSV
Sbjct: 604 RTLDLTSSLEVGPSPENASGNSSSSSSSSRCILTIAFQFPFENNLQENVAGMACQYVRSV 663

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVG-GD 718
           ISSVQRVAMA+ PSG+SP+LG KLSPGSPEA+TLA WI QSYS+HLG+EL+  DS+G  D
Sbjct: 664 ISSVQRVAMAVSPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSELMTIDSLGSND 723

Query: 719 SVLKNLWQHSDAILCCSLK 737
           SVLK LW H DAILCCSLK
Sbjct: 724 SVLKLLWDHQDAILCCSLK 742


>gi|449456008|ref|XP_004145742.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           REVOLUTA-like [Cucumis sativus]
          Length = 840

 Score = 1256 bits (3249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/749 (81%), Positives = 655/749 (87%), Gaps = 20/749 (2%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAM I       RESS+GSI +H   +GKYVRYT+EQVEALERVY+ECPKPSSLRRQQL+
Sbjct: 1   MAMAIAHH----RESSTGSITRHLDSSGKYVRYTSEQVEALERVYAECPKPSSLRRQQLV 56

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           R+CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKL AMNKLLMEENDRLQKQVS
Sbjct: 57  RDCPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVS 116

Query: 121 QLVCENGYMKQQLRTAPA--TTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSK 178
           QLVCENG+M+QQL T PA  T DASCDSVVTTPQ S RDANNPAG  S     L  FL  
Sbjct: 117 QLVCENGFMRQQLHTVPAAATADASCDSVVTTPQPSRRDANNPAGXFSKPIIDLF-FLLT 175

Query: 179 ATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFR 238
              T+  WVQMPGMKPGPDSVGIFAISQSC GVAARACGLVSLEP+KIAEILKDRPSWFR
Sbjct: 176 YKXTSCXWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPSKIAEILKDRPSWFR 235

Query: 239 DCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS 298
           DCRSLEVFTMFPAGN GTIEL+YTQ YAPTTLAPARDFWTLRYT TL+NGSLVVCERSLS
Sbjct: 236 DCRSLEVFTMFPAGNGGTIELVYTQVYAPTTLAPARDFWTLRYTITLENGSLVVCERSLS 295

Query: 299 GSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS 358
           GSGAGP+ A+AAQFVRAEMLPSG LIRPC+GGGSIIHIVDHLNLEAW VPEVLRPLYESS
Sbjct: 296 GSGAGPSEAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWHVPEVLRPLYESS 355

Query: 359 KVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW 408
           KVVAQ+MTIA          ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFND+GW
Sbjct: 356 KVVAQKMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDNGW 415

Query: 409 SLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE 468
           SL+ C+GAEDV++ VNSTK+  T SNP NSL + GG+LCAKASMLLQNVPPA+LVRFLRE
Sbjct: 416 SLINCEGAEDVVLTVNSTKNFGTTSNPANSLTYPGGVLCAKASMLLQNVPPAVLVRFLRE 475

Query: 469 HRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH 528
           HRSEWADFN+DAYSAA+LKA SY YPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH
Sbjct: 476 HRSEWADFNIDAYSAATLKANSYTYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH 535

Query: 529 SLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS 588
            + QEDAFVSRDIHLLQICSG+DENAVGACSEL+FAPIDEMFPDD PLLPSGFRIIPLDS
Sbjct: 536 PMVQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLLPSGFRIIPLDS 595

Query: 589 KTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNV 648
           +T D   +    RTLDLTSSLEVG  T+  AGD+SS    RSVLTIAFQFPFES++QDNV
Sbjct: 596 RTSDAKGS---QRTLDLTSSLEVGSGTSNTAGDASSSQSARSVLTIAFQFPFESSMQDNV 652

Query: 649 ATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAE 708
           A MA QYVRSVISSVQRVAMAI PSG  P LGPKLSPGSPEALTLAHWIC+SYS  LG E
Sbjct: 653 ANMAHQYVRSVISSVQRVAMAISPSGGGPALGPKLSPGSPEALTLAHWICKSYSLQLGTE 712

Query: 709 LLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           L++SDS+ GDS+LKNLW H DAILCCSLK
Sbjct: 713 LIKSDSLEGDSLLKNLWNHQDAILCCSLK 741


>gi|357453943|ref|XP_003597252.1| Homeobox leucine-zipper protein [Medicago truncatula]
 gi|355486300|gb|AES67503.1| Homeobox leucine-zipper protein [Medicago truncatula]
          Length = 839

 Score = 1187 bits (3070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 573/754 (75%), Positives = 652/754 (86%), Gaps = 23/754 (3%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAM + QQQ+        SI +H   +GKYVRYTAEQ+EALE+VY ECPKPSSLRRQQLI
Sbjct: 1   MAMAVAQQQRDN------SIERHLDSSGKYVRYTAEQIEALEKVYVECPKPSSLRRQQLI 54

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECP+L+NIEPKQIKVWFQNRRCREKQRKEAS+LQ+VNRKL+AMNKLLMEEN+RLQKQVS
Sbjct: 55  RECPVLANIEPKQIKVWFQNRRCREKQRKEASQLQSVNRKLSAMNKLLMEENERLQKQVS 114

Query: 121 QLVCENGYMKQQLRTAPATTDA---SCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLS 177
           QLV ENG+M+QQL   PA  +A     DS    P +SLRDAN+PAG LSIAEETL EFLS
Sbjct: 115 QLVNENGFMRQQLHPTPAAPNADGSGVDSAAAAPMNSLRDANSPAGFLSIAEETLTEFLS 174

Query: 178 KATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWF 237
           KATGTAVDWVQMPGMKPGPDSVGIFAISQ  +GVAARACGLVSLEPTKI EILKDRP+W+
Sbjct: 175 KATGTAVDWVQMPGMKPGPDSVGIFAISQGGNGVAARACGLVSLEPTKIVEILKDRPTWY 234

Query: 238 RDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL 297
           RDCRS EVFTMFPAGN GTIEL+YTQ YAP TLA ARDFWTLRYTT L+NGS+VVCERSL
Sbjct: 235 RDCRSSEVFTMFPAGNGGTIELVYTQTYAPMTLASARDFWTLRYTTNLENGSVVVCERSL 294

Query: 298 SGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYES 357
           SG+GAGPN A+A+QF RAEMLPSG LIRPC+GGGSIIHIVDHLNL+AWSVPEVLRP+YES
Sbjct: 295 SGTGAGPNAAAASQFERAEMLPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPIYES 354

Query: 358 SKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDG 407
           S++VAQR+TIA          ETSG+VVY +GRQPAVLRTFSQRLSRGFNDAVNGFND+G
Sbjct: 355 SQMVAQRLTIAALRYIRQVAQETSGDVVYSMGRQPAVLRTFSQRLSRGFNDAVNGFNDNG 414

Query: 408 WSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR 467
           WS++ CDGAE V I+VNS K+LS  SNP +SL+ LGGI+CAKASMLLQN  PA+LVRFLR
Sbjct: 415 WSVLNCDGAEGVTISVNSIKNLSGTSNPASSLSLLGGIVCAKASMLLQNTTPAVLVRFLR 474

Query: 468 EHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEG 527
           EHRSEWADF+VDA+SAASLKAGSY YPGMR T+FTG+Q IMPLGHTIEHEE+LE+IRLEG
Sbjct: 475 EHRSEWADFSVDAFSAASLKAGSYGYPGMRSTKFTGNQAIMPLGHTIEHEEMLEIIRLEG 534

Query: 528 HSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLD 587
             LAQ+D+FVSRD+HLLQ+C+G+DENAVGACSEL+FAPID+MFP+D PL+PSGFRI+ L+
Sbjct: 535 --LAQDDSFVSRDVHLLQLCTGIDENAVGACSELIFAPIDDMFPEDAPLVPSGFRIVLLN 592

Query: 588 SKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDN 647
           S+  DT +T TA+RTLDLTS LEV PAT  A GD +SC + R VLT+AFQFPFES LQDN
Sbjct: 593 SQPGDTKNTTTANRTLDLTSGLEVSPATAHANGD-ASCPNNRCVLTVAFQFPFESGLQDN 651

Query: 648 VATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGA 707
           VA MARQYVR V+S+VQ VA AI PS ++ + G KLSPG+PEALTLA WICQSYS+HLGA
Sbjct: 652 VAAMARQYVRRVVSAVQAVATAISPSSVNTSGGAKLSPGTPEALTLAQWICQSYSHHLGA 711

Query: 708 ELLRSDSVGGDSVLKNLWQHSDAILCCSLK-VPL 740
           +LLRSDS+ GD +LK+LW H DAILCCSLK VP+
Sbjct: 712 QLLRSDSLIGDMLLKHLWHHPDAILCCSLKQVPV 745


>gi|383212091|dbj|BAM08932.1| class III homeobox-leucine zipper protein [Asparagus asparagoides]
          Length = 839

 Score = 1134 bits (2932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/734 (73%), Positives = 622/734 (84%), Gaps = 15/734 (2%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           SSG + KH    GKYVRYTAEQVEALE+VY+ CPKPSS+RRQQLIRE PILSNIEPKQIK
Sbjct: 13  SSGGLEKHMDSTGKYVRYTAEQVEALEKVYAVCPKPSSMRRQQLIRENPILSNIEPKQIK 72

Query: 76  VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT 135
           VWFQNRRCREKQRKE+SRLQ VNRKLTA+NKLLMEEN+RLQKQV+QLV EN YMKQQL+ 
Sbjct: 73  VWFQNRRCREKQRKESSRLQAVNRKLTALNKLLMEENERLQKQVAQLVHENTYMKQQLQN 132

Query: 136 APATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPG 195
                D SC+SVVTTPQ+ LRDA+NPAGLLS+AEETL EFLSKATGTAVDWVQMPGMKPG
Sbjct: 133 VSLGNDTSCESVVTTPQNPLRDASNPAGLLSVAEETLTEFLSKATGTAVDWVQMPGMKPG 192

Query: 196 PDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAG 255
           PDS+GI AISQ+CSGVAARACGLVSLEPTK+AEILKDRPSWFRDCRSLEVFTMFPAGN G
Sbjct: 193 PDSIGIVAISQTCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCRSLEVFTMFPAGNGG 252

Query: 256 TIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRA 315
           TIEL+Y Q YAPTTLAPARD WTLRYTT L++GSLVVCERSL GSG GP+ ASA QF RA
Sbjct: 253 TIELVYMQMYAPTTLAPARDLWTLRYTTNLEDGSLVVCERSLRGSGGGPSAASAHQFARA 312

Query: 316 EMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------- 368
           EM PSG LIRPCDGGGSI+HIVDHLNLE WSVPEVLRPLYESS+V+AQ+MT A       
Sbjct: 313 EMFPSGFLIRPCDGGGSIVHIVDHLNLEPWSVPEVLRPLYESSRVLAQKMTAAALRHIRQ 372

Query: 369 ---ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
              E SGE+VY LGRQPAVLRTFSQ+LSRGFNDA+N F DDGWS+M CDG EDV++  NS
Sbjct: 373 IAQEMSGEMVYPLGRQPAVLRTFSQKLSRGFNDAINSFVDDGWSVMGCDGVEDVVVTTNS 432

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAAS 485
            K  ++ +NP N++    G++CAKASMLLQNVPPALLVRFLREHRSEWAD+N+DAYSA+S
Sbjct: 433 MKKTNSDANPVNAVTVPDGVVCAKASMLLQNVPPALLVRFLREHRSEWADYNIDAYSASS 492

Query: 486 LKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQ 545
           LKAGS  +PG+R TRF+GSQ IM L HT+E+EELLEV+RLEG +L Q++A +SRDIHLLQ
Sbjct: 493 LKAGSAFFPGLRSTRFSGSQTIMHLAHTVENEELLEVVRLEGQALTQDEAILSRDIHLLQ 552

Query: 546 ICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDL 605
           +CSG+DENA G+C +LVFAPIDE+FPDD PLLPSGFR+IPLD +    PD L ++RTLDL
Sbjct: 553 LCSGIDENAAGSCVQLVFAPIDELFPDDAPLLPSGFRVIPLDCR----PDGLNSNRTLDL 608

Query: 606 TSSLEVGPATNPAAGDSS-SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQ 664
            SSLEVG A N   G+++ S +  RSVLTIAFQFP+E +LQ++VA MARQYVR+++S+VQ
Sbjct: 609 ASSLEVGSAVNRTGGEAAPSDYSLRSVLTIAFQFPYEFHLQESVAAMARQYVRNIVSAVQ 668

Query: 665 RVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNL 724
           RV+MA+ PS L  +   KL  GSPEA+TLA WICQSY+ HLG +LLRS    G+S+LK L
Sbjct: 669 RVSMALAPSQLGLSSSDKLLAGSPEAVTLARWICQSYNCHLGLDLLRSTEESGESLLKML 728

Query: 725 WQHSDAILCCSLKV 738
           W H DAILCCSLK+
Sbjct: 729 WDHPDAILCCSLKM 742


>gi|89514863|gb|ABD75306.1| class III homeodomain-leucine zipper protein C3HDZ1 [Ginkgo biloba]
          Length = 842

 Score = 1113 bits (2878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/739 (75%), Positives = 618/739 (83%), Gaps = 27/739 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K  +D  KYVRYT+EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 10  KGAMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 69

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL+ A  ATT
Sbjct: 70  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNASVATT 129

Query: 141 DASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           D SC+SVVT        TPQH  RDA+ PAGLLSIAEETLAEFLSKATGTAVDWVQMPGM
Sbjct: 130 DTSCESVVTSGQHQHNPTPQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 188

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI AIS SCSGVAARACGLV LEPTKIAEILKDRPSW RDCR L+V T FP G
Sbjct: 189 KPGPDSIGIVAISHSCSGVAARACGLVGLEPTKIAEILKDRPSWLRDCRCLDVLTPFPTG 248

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIELLY Q YAPTTLA ARDFWTLRYTT L++GSLVVCERSLSG+  GP+ A A  F
Sbjct: 249 NGGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLSGAQGGPSIAPAQHF 308

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+MTIA    
Sbjct: 309 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 368

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E +GEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF DDGWSLM  DG EDV IA
Sbjct: 369 IRQIAQEVTGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGNDGMEDVTIA 428

Query: 423 VNS--TKSLSTASNPTNSL-AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           +NS  +K L +  N +N L A  GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+D
Sbjct: 429 INSSPSKLLGSQVNSSNGLTAVGGGILCAKASMLLQNVPPALLVRFLREHRSEWADCNID 488

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAA+LKA  Y+ PG R   F+GSQ+I+PL HT+EHEE LEVI+LEGH L QE+A +SR
Sbjct: 489 AYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSR 548

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D+ LLQ+CSG+DENA GAC++LVFAPIDE F DD PLLPSGFR+IPLDS+T  T      
Sbjct: 549 DMFLLQLCSGIDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDSRTDGTSG---P 605

Query: 600 HRTLDLTSSLEVGPATNPAAGDS-SSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
           +RTLDL S+LEVG A    +GDS ++  + RSVLTIAFQF +E++L++NVA+MARQYVRS
Sbjct: 606 NRTLDLASALEVGSAGTRTSGDSGANSFNLRSVLTIAFQFTYENHLRENVASMARQYVRS 665

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           V++SVQRVAMA+ PS LS  +GP+L PG+PEALTLA WICQSY +HLG ELLR+D    +
Sbjct: 666 VVASVQRVAMALAPSRLSSHVGPRLPPGTPEALTLARWICQSYRFHLGVELLRADCEASE 725

Query: 719 SVLKNLWQHSDAILCCSLK 737
           SVLK LW HSDAI+CCSLK
Sbjct: 726 SVLKLLWHHSDAIVCCSLK 744


>gi|90110448|gb|ABD90526.1| class III homeodomain-leucine zipper [Ginkgo biloba]
          Length = 842

 Score = 1108 bits (2867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 554/739 (74%), Positives = 617/739 (83%), Gaps = 27/739 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K  +D  KYVRYT+EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 10  KGAMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 69

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL+ A  ATT
Sbjct: 70  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNASVATT 129

Query: 141 DASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           D SC+SVVT        TPQH  RDA+ PAGLLSIAEETLAEFLSKATGTAVDWVQMPGM
Sbjct: 130 DTSCESVVTSGQHQHNPTPQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 188

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI AIS SCSGVAARACGLV LEPTKIAEILKDRPSW RDCR L+V T FP G
Sbjct: 189 KPGPDSIGIVAISHSCSGVAARACGLVGLEPTKIAEILKDRPSWLRDCRCLDVLTPFPTG 248

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIELLY Q YAPTTLA ARDFWTLRYTT L++GSLVVCERSLSG+  GP+ A A  F
Sbjct: 249 NGGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLSGAQGGPSIAPAQHF 308

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+MTIA    
Sbjct: 309 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 368

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E +GEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF DDGWSLM  DG EDV IA
Sbjct: 369 IRQIAQEVTGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGNDGMEDVTIA 428

Query: 423 VNS--TKSLSTASNPTNSL-AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           +NS  +K L +  N +N L A  GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+D
Sbjct: 429 INSSPSKLLGSQVNSSNGLTAVGGGILCAKASMLLQNVPPALLVRFLREHRSEWADCNID 488

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAA+LKA  Y+ PG R   F+GSQ+I+PL HT+EHEE LEVI+LEGH L QE+A +SR
Sbjct: 489 AYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSR 548

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D+ LLQ+CSG+DENA GAC++LVFAPIDE F DD PLLPSGFR+IPLDS+T  T      
Sbjct: 549 DMFLLQLCSGIDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDSRTDGTSG---P 605

Query: 600 HRTLDLTSSLEVGPATNPAAGDS-SSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
           +RTLDL S+LEVG A    +GDS ++  + RSVLTIAFQF +E++L++NVA+MARQYVRS
Sbjct: 606 NRTLDLASALEVGSAGTRTSGDSGANSFNLRSVLTIAFQFTYENHLRENVASMARQYVRS 665

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           V++SVQRVAMA+ PS LS  +GP+L PG+PEALTLA WICQSY + LG ELLR+D    +
Sbjct: 666 VVASVQRVAMALAPSRLSSHVGPRLPPGTPEALTLARWICQSYRFLLGVELLRADCEASE 725

Query: 719 SVLKNLWQHSDAILCCSLK 737
           SVLK LW HSDAI+CCSLK
Sbjct: 726 SVLKLLWHHSDAIVCCSLK 744


>gi|383212093|dbj|BAM08933.1| class III homeobox-leucine zipper protein [Asparagus asparagoides]
          Length = 849

 Score = 1095 bits (2831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/762 (71%), Positives = 620/762 (81%), Gaps = 36/762 (4%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAMV+  Q Q      +G  ++ Q+D GKYVRYT EQVEALERVYSECPKPSS+RRQQLI
Sbjct: 1   MAMVVAGQGQ------NGKSSQQQIDAGKYVRYTPEQVEALERVYSECPKPSSMRRQQLI 54

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS
Sbjct: 55  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 114

Query: 121 QLVCENGYMKQQLRTAPATTDASCDSVVT----------TPQHSLRDANNPAGLLSIAEE 170
           QLV +NGYM+QQ+ T  ATTD SC+SVVT          TPQH  RDANNPAGLL+IAEE
Sbjct: 115 QLVYDNGYMRQQIHTV-ATTDTSCESVVTSGQHHQQQNPTPQHPQRDANNPAGLLAIAEE 173

Query: 171 TLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEIL 230
           TLAEFLSKATGTAV+WVQM GMKPGPDS+GI A+S +CSGVAARACGLVSLEPTK+AEIL
Sbjct: 174 TLAEFLSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEIL 233

Query: 231 KDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSL 290
           KDRPSW+RDCRSL+V T+ P GN G IEL+Y Q YAPTTLA ARDFWTLRYTT L++GSL
Sbjct: 234 KDRPSWYRDCRSLDVLTVIPTGNGGNIELMYMQTYAPTTLASARDFWTLRYTTGLEDGSL 293

Query: 291 VVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEV 350
           V+CERSL+ S  GP    A+ FVRAEMLPSG LIRPC+GGGS+IHIVDH++L+AWSVPEV
Sbjct: 294 VICERSLTPSTGGPAGPPASGFVRAEMLPSGYLIRPCEGGGSMIHIVDHMDLDAWSVPEV 353

Query: 351 LRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAV 400
           LRPLYES K++AQ+MTIA          ETSGE+ YG GRQPAVLRTFSQRLS+GFNDAV
Sbjct: 354 LRPLYESPKILAQKMTIAALHHIRQIAQETSGEIAYGGGRQPAVLRTFSQRLSKGFNDAV 413

Query: 401 NGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVP 458
           NGF D+GWSL+  DG EDV I +NS+ +    S+  +S+     GGILCAKASMLLQNVP
Sbjct: 414 NGFTDNGWSLLGSDGVEDVTIMINSSPNKLFGSHANSSIFSPIGGGILCAKASMLLQNVP 473

Query: 459 PALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTR-FTGSQIIMPLGHTIEHE 517
           PALLVRFLREHRSEWAD  VDAYSAASL+A  YA PG+R +  F G Q+I+PL HTIEHE
Sbjct: 474 PALLVRFLREHRSEWADCGVDAYSAASLRASPYAVPGLRASSGFMGGQVILPLAHTIEHE 533

Query: 518 ELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLL 577
           E LEVIRLEGH   Q+D  ++RD+ LLQ+CSGVDEN+VGAC++LVFAPIDE F DD PLL
Sbjct: 534 EFLEVIRLEGHGFTQDDVIMARDMFLLQLCSGVDENSVGACAQLVFAPIDESFADDAPLL 593

Query: 578 PSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP--ATNPAAGDSSSCHHTRSVLTIA 635
           PSGFRIIPLD KT    D+  A RTLDL S+LEVGP  A   A+ ++S+ ++ RSVLTIA
Sbjct: 594 PSGFRIIPLDPKT----DSPAATRTLDLASTLEVGPGSAARSASDNASNAYNLRSVLTIA 649

Query: 636 FQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAH 695
           FQF FE++L+DNVA MARQYVRSV++SVQRVAMAI PS L   LG K  PGSPEA TLA 
Sbjct: 650 FQFTFENHLRDNVAAMARQYVRSVVASVQRVAMAIAPSRLGSQLGVKHPPGSPEAQTLAR 709

Query: 696 WICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           WI +SY +H G EL R++S   DS+LK LWQHSDAI+CCSLK
Sbjct: 710 WISRSYRFHTGVELFRAESQADDSLLKLLWQHSDAIMCCSLK 751


>gi|383212095|dbj|BAM08934.1| class III homeobox-leucine zipper protein [Asparagus officinalis]
          Length = 849

 Score = 1093 bits (2826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/762 (71%), Positives = 618/762 (81%), Gaps = 36/762 (4%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAMV+  Q Q      +G   + Q+D GKYVRYT EQVEALERVYSECPKPSS+RRQQLI
Sbjct: 1   MAMVVAGQGQ------NGKSIQQQIDAGKYVRYTPEQVEALERVYSECPKPSSIRRQQLI 54

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS
Sbjct: 55  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 114

Query: 121 QLVCENGYMKQQLRTAPATTDASCDSVVT----------TPQHSLRDANNPAGLLSIAEE 170
           QLV +NGYM+QQ+ T  ATTD SC+SVVT          TPQH  RDANNPAGLL+IAEE
Sbjct: 115 QLVYDNGYMRQQIHTV-ATTDTSCESVVTSGQHHQQQNPTPQHPQRDANNPAGLLAIAEE 173

Query: 171 TLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEIL 230
           TLAEFLSKATGTAV+WVQM GMKPGPDS+GI A+S +CSGVAARACGLVSLEPTK+AEIL
Sbjct: 174 TLAEFLSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEIL 233

Query: 231 KDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSL 290
           KDRPSW+RDCRSL+V T+ P GN G IEL+Y Q YAPTTLA ARDFWTLRYTT L++GSL
Sbjct: 234 KDRPSWYRDCRSLDVLTVIPTGNGGNIELMYMQTYAPTTLASARDFWTLRYTTGLEDGSL 293

Query: 291 VVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEV 350
           V+CERSL+ S  GP    A+ FVRAEMLPSG LIRPC+GGGS+IHIVDH++L+AWSVPEV
Sbjct: 294 VICERSLTPSTGGPAGPPASGFVRAEMLPSGYLIRPCEGGGSMIHIVDHMDLDAWSVPEV 353

Query: 351 LRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAV 400
           LRPLYES K++AQ+MTIA          ETSGE+ YG GRQPAVLRTFSQRLS+GFNDAV
Sbjct: 354 LRPLYESPKILAQKMTIAALHHIRQIAQETSGEIAYGGGRQPAVLRTFSQRLSKGFNDAV 413

Query: 401 NGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVP 458
           NGF DDGWSL+  DG EDV I +NS+ +    S+  +S+     GGILCAKASMLLQNVP
Sbjct: 414 NGFTDDGWSLLGSDGVEDVTIMINSSPNKLFGSHANSSIFSPIGGGILCAKASMLLQNVP 473

Query: 459 PALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTR-FTGSQIIMPLGHTIEHE 517
           PALLVRFLREHRSEWAD  VDAYSAASL+A  YA PG+R +  F G Q+I+PL HT+EHE
Sbjct: 474 PALLVRFLREHRSEWADCGVDAYSAASLRASPYAVPGLRASNGFMGGQVILPLAHTVEHE 533

Query: 518 ELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLL 577
           E LEVIRLEGH   Q+D  +SRD+ LLQ+CSGVDEN+VGAC++LVFAPIDE F DD PLL
Sbjct: 534 EFLEVIRLEGHGFTQDDVIMSRDMFLLQLCSGVDENSVGACAQLVFAPIDESFADDAPLL 593

Query: 578 PSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP--ATNPAAGDSSSCHHTRSVLTIA 635
           PSGFRIIPLD KT    D+  A RTLDL S+LEVGP  A   A+ ++S+ ++ RSVLTIA
Sbjct: 594 PSGFRIIPLDPKT----DSPAATRTLDLASTLEVGPGSAARSASDNASNAYNLRSVLTIA 649

Query: 636 FQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAH 695
           FQF FE++L+DNVA MARQYVRSV++SVQRVAMAI PS L   LG K  PGSPEA TLA 
Sbjct: 650 FQFTFENHLRDNVAAMARQYVRSVVASVQRVAMAIAPSRLGTQLGVKHPPGSPEAQTLAR 709

Query: 696 WICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           WI +SY +H G EL R++    DS+LK LWQHSDAI+CCSLK
Sbjct: 710 WISRSYRFHTGVELFRAEPQADDSLLKLLWQHSDAIMCCSLK 751


>gi|414864315|tpg|DAA42872.1| TPA: putative homeobox/lipid-binding domain family protein, partial
           [Zea mays]
          Length = 917

 Score = 1092 bits (2825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 523/742 (70%), Positives = 611/742 (82%), Gaps = 18/742 (2%)

Query: 15  SSSGSINK-HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           S SG  +K   +D+GKYVRYT EQVE LER+Y +CPKPSS RRQQL+RECPILSNIEPKQ
Sbjct: 12  SDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQ 71

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           IKVWFQNRRCR+KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL
Sbjct: 72  IKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQL 131

Query: 134 RTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           +      D SC+S VT P +++RDA+NP+GLL+IAEET  EFLSKATGTA+DWVQMPGMK
Sbjct: 132 QNTSLANDTSCESNVTAPPNAIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 191

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDSVGI AIS  C GVAARACGLV+LEPTK+ EILKDRPSWFRDCRSLEVFTMFPAGN
Sbjct: 192 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSWFRDCRSLEVFTMFPAGN 251

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+Y Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSL+GSG GPN ASA QFV
Sbjct: 252 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQFV 311

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEMLPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT       
Sbjct: 312 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 371

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV++A 
Sbjct: 372 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVVAC 431

Query: 424 NSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSA 483
           NSTK +   SN   +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A
Sbjct: 432 NSTKKIRNNSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLA 491

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
           +SLK  + + PG+RP RF+G Q+IMPL HT+E+EE+LEV+RLEG  L  ++A +SRDIHL
Sbjct: 492 SSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHL 551

Query: 544 LQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTL 603
           LQ+C+G+DE +VG+  +LVFAPIDE FPDD PL+ SGFR+IPLD KT    D +++ RTL
Sbjct: 552 LQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDMKT----DGVSSGRTL 607

Query: 604 DLTSSLEVGPATNPAAGDS--SSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           DL SSL+VG A   A+GD+    C + RSVLTIAFQFP+E +LQD+VATMARQYVRSV+S
Sbjct: 608 DLASSLDVGSAAPQASGDAPPDDC-NLRSVLTIAFQFPYEMHLQDSVATMARQYVRSVVS 666

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVL 721
           +VQRV+MAI PS      G ++  G PEA TLA W+CQSY YHLG ELL      G+++L
Sbjct: 667 AVQRVSMAISPSQSGLNAGQRMLSGFPEAATLARWVCQSYHYHLGVELLNQSDEAGEALL 726

Query: 722 KNLWQHSDAILCCSLKVPLQFH 743
           K LW H DA+LCCS KVP + +
Sbjct: 727 KMLWHHPDAVLCCSFKVPEELY 748


>gi|359483940|ref|XP_002281868.2| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 1
           [Vitis vinifera]
 gi|147820218|emb|CAN73584.1| hypothetical protein VITISV_033098 [Vitis vinifera]
 gi|297740817|emb|CBI30999.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score = 1090 bits (2819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/741 (72%), Positives = 607/741 (81%), Gaps = 28/741 (3%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           +K Q+D+ KYVRYT EQVEALERVYSECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQN
Sbjct: 9   SKQQMDSSKYVRYTPEQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQN 68

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-AT 139
           RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL++A  AT
Sbjct: 69  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQSASTAT 128

Query: 140 TDASCDSVVT----------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
           TD SC+SVV           TPQH  RDA+NPAGLL+IAEETLAEFLSKATGTAVDWVQM
Sbjct: 129 TDTSCESVVMSGQHQQQQNPTPQHPQRDASNPAGLLAIAEETLAEFLSKATGTAVDWVQM 188

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
            GMKPGPDS+GI A+S++CSGVAARACGLVSLEPTK+AEILKDRPSWFRDCR L+V ++ 
Sbjct: 189 IGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCRCLDVLSVI 248

Query: 250 PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA 309
           P GN GTIEL+Y Q YAPTTLA ARDFWTLRYTT+L++GSLV+CERSL+ S  GP    A
Sbjct: 249 PTGNGGTIELIYMQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPA 308

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA- 368
           + ++RAEMLPSG LIRPC+GGGSIIHIVDH++L+AWSVPEVLRPLYESSK++AQ+ T+A 
Sbjct: 309 SSYIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKTTVAA 368

Query: 369 ---------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                    ETSGE+ YG GRQPAVLRTFSQRL RGFNDAVNGF DDGWSLM  DG EDV
Sbjct: 369 LRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFADDGWSLMGSDGVEDV 428

Query: 420 IIAVNS--TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
            I +NS  +K L    N T    F GG+LCAKASMLLQNVPPALLVRFLREHRSEWAD+ 
Sbjct: 429 TIVINSSPSKFLGPQYNSTMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYG 488

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
           VDAYSAA LKA  Y  P  RP  F  SQ+I+PL HT+EHEE LEV+RLEGH+ + ED  +
Sbjct: 489 VDAYSAACLKASPYEVPCARPGGFPSSQVILPLAHTVEHEEFLEVVRLEGHAFSPEDVAL 548

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTL 597
           +RD++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPLD KT    D  
Sbjct: 549 TRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKT----DGP 604

Query: 598 TAHRTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYV 656
            A RTLDL S+LEVG     PA     + ++ RSVLTIAFQF FE++++DNVA MARQYV
Sbjct: 605 AATRTLDLASTLEVGAGGARPANESDLNNYNLRSVLTIAFQFTFENHVRDNVAAMARQYV 664

Query: 657 RSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVG 716
           RSV++SVQRVAMAI PS LS  +G K  PGSPEALTLA WIC+SY  H G ELLR DS G
Sbjct: 665 RSVMASVQRVAMAIAPSRLSSHMGLKPLPGSPEALTLARWICRSYRIHTGGELLRVDSQG 724

Query: 717 GDSVLKNLWQHSDAILCCSLK 737
           GD+VLK LW HSDAI+CCSLK
Sbjct: 725 GDAVLKLLWNHSDAIMCCSLK 745


>gi|414864313|tpg|DAA42870.1| TPA: putative homeobox/lipid-binding domain family protein isoform
           1 [Zea mays]
 gi|414864314|tpg|DAA42871.1| TPA: putative homeobox/lipid-binding domain family protein isoform
           2 [Zea mays]
          Length = 840

 Score = 1088 bits (2813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/736 (70%), Positives = 607/736 (82%), Gaps = 18/736 (2%)

Query: 15  SSSGSINK-HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           S SG  +K   +D+GKYVRYT EQVE LER+Y +CPKPSS RRQQL+RECPILSNIEPKQ
Sbjct: 12  SDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQ 71

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           IKVWFQNRRCR+KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL
Sbjct: 72  IKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQL 131

Query: 134 RTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           +      D SC+S VT P +++RDA+NP+GLL+IAEET  EFLSKATGTA+DWVQMPGMK
Sbjct: 132 QNTSLANDTSCESNVTAPPNAIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 191

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDSVGI AIS  C GVAARACGLV+LEPTK+ EILKDRPSWFRDCRSLEVFTMFPAGN
Sbjct: 192 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSWFRDCRSLEVFTMFPAGN 251

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+Y Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSL+GSG GPN ASA QFV
Sbjct: 252 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQFV 311

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEMLPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT       
Sbjct: 312 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 371

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV++A 
Sbjct: 372 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVVAC 431

Query: 424 NSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSA 483
           NSTK +   SN   +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A
Sbjct: 432 NSTKKIRNNSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLA 491

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
           +SLK  + + PG+RP RF+G Q+IMPL HT+E+EE+LEV+RLEG  L  ++A +SRDIHL
Sbjct: 492 SSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHL 551

Query: 544 LQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTL 603
           LQ+C+G+DE +VG+  +LVFAPIDE FPDD PL+ SGFR+IPLD KT    D +++ RTL
Sbjct: 552 LQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDMKT----DGVSSGRTL 607

Query: 604 DLTSSLEVGPATNPAAGDS--SSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           DL SSL+VG A   A+GD+    C + RSVLTIAFQFP+E +LQD+VATMARQYVRSV+S
Sbjct: 608 DLASSLDVGSAAPQASGDAPPDDC-NLRSVLTIAFQFPYEMHLQDSVATMARQYVRSVVS 666

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVL 721
           +VQRV+MAI PS      G ++  G PEA TLA W+CQSY YHLG ELL      G+++L
Sbjct: 667 AVQRVSMAISPSQSGLNAGQRMLSGFPEAATLARWVCQSYHYHLGVELLNQSDEAGEALL 726

Query: 722 KNLWQHSDAILCCSLK 737
           K LW H DA+LCCS K
Sbjct: 727 KMLWHHPDAVLCCSFK 742


>gi|225449048|ref|XP_002274194.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Vitis
           vinifera]
          Length = 841

 Score = 1088 bits (2813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/739 (72%), Positives = 617/739 (83%), Gaps = 17/739 (2%)

Query: 12  QRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEP 71
           Q ESS G        +GKYVRYTAEQVEALERVY+ECPKPSS RRQQLIRECPILSNIE 
Sbjct: 11  QGESSGGGAGGGGGGDGKYVRYTAEQVEALERVYAECPKPSSTRRQQLIRECPILSNIES 70

Query: 72  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ 131
           KQIKVWFQNRRCREKQ+KEA +LQ+VN+KL +MNKLLMEEN+RLQKQVSQLV ENGYMKQ
Sbjct: 71  KQIKVWFQNRRCREKQKKEAVQLQSVNKKLNSMNKLLMEENERLQKQVSQLVYENGYMKQ 130

Query: 132 QLRTAPATT-DASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMP 190
           QL+   ATT D  CDS+V TPQHS R  NNP GLLSIAEE + EFLSKA GTAVDWVQ+P
Sbjct: 131 QLQNVTATTTDTRCDSLVATPQHSSRTGNNPIGLLSIAEEAMGEFLSKAKGTAVDWVQIP 190

Query: 191 GMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFP 250
           GMKPGPDSVG  AIS SC+GVAARAC LVSLEPT+I EILKDR SWFRDCR LEVF  FP
Sbjct: 191 GMKPGPDSVGTVAISHSCNGVAARACSLVSLEPTEIMEILKDRQSWFRDCRKLEVFAKFP 250

Query: 251 AGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAA 310
           AGN G +EL+Y Q YAPTTLAPARDFWTLRYT++L++GSLVVCERS+SGSGAGPNP++A+
Sbjct: 251 AGNGGILELIYMQVYAPTTLAPARDFWTLRYTSSLEDGSLVVCERSMSGSGAGPNPSTAS 310

Query: 311 QFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-- 368
           QFVRA+MLPSG LIRPC+GGGSIIHIVDHL+LEAWSVPEVL+PLY+SSK+VAQ+MT+A  
Sbjct: 311 QFVRAKMLPSGYLIRPCEGGGSIIHIVDHLDLEAWSVPEVLQPLYKSSKLVAQKMTVAAL 370

Query: 369 --------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI 420
                   ETSG+V + LG+QPAVLR F Q+LSRGFNDA+NGFNDDGWSLM  DGAED+I
Sbjct: 371 HHIRQIAQETSGDVTHTLGKQPAVLRAFRQKLSRGFNDAINGFNDDGWSLMQIDGAEDLI 430

Query: 421 IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDA 480
           I+VNS K+LST SN T +L+  GGILC KA+MLLQNV P+L+VRFLREHRSEWADF+VDA
Sbjct: 431 ISVNSAKNLSTISNSTAALSLPGGILCVKAAMLLQNVSPSLMVRFLREHRSEWADFSVDA 490

Query: 481 YSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVS-R 539
           Y+AASL+  S+A PG+ P++F+G+Q  M LG T E+ E+LE+I+LEGH+L+QE+A V  R
Sbjct: 491 YAAASLRGDSFALPGLSPSQFSGNQTTMSLGITAEN-EILEIIQLEGHALSQEEASVMWR 549

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           +IHLLQIC+GVD+NA  ACSELVF+PIDEMFPDD P+L SGFRI+ LD+KT D  D L A
Sbjct: 550 NIHLLQICNGVDDNAGEACSELVFSPIDEMFPDDAPILSSGFRILELDAKTCDRQDMLAA 609

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
            R ++L S+LEV   ++ A G ++S   +RSVL IAFQF FES+LQ NV TMARQY R+V
Sbjct: 610 KRMMNLASNLEV--RSSDATGCTASSSDSRSVLIIAFQFLFESHLQGNVVTMARQYARNV 667

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ISSVQRVAMAI PSGL     PK + GSPEALTLA WICQSYS+HLG +LL+S+  GGDS
Sbjct: 668 ISSVQRVAMAITPSGLHGR--PKSTSGSPEALTLARWICQSYSFHLGDQLLKSNYHGGDS 725

Query: 720 VLKNLWQHSDAILCCSLKV 738
           VLK LW H DAILCCSLK+
Sbjct: 726 VLKQLWHHQDAILCCSLKL 744


>gi|242042549|ref|XP_002468669.1| hypothetical protein SORBIDRAFT_01g050000 [Sorghum bicolor]
 gi|241922523|gb|EER95667.1| hypothetical protein SORBIDRAFT_01g050000 [Sorghum bicolor]
          Length = 840

 Score = 1087 bits (2812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/736 (70%), Positives = 606/736 (82%), Gaps = 18/736 (2%)

Query: 15  SSSGSINK-HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           S SG  +K   +D+GKYVRYT EQVE LER+Y +CPKPSS RRQQL+RECPILSNIEPKQ
Sbjct: 12  SDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQ 71

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           IKVWFQNRRCR+KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL
Sbjct: 72  IKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQL 131

Query: 134 RTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           +      D SC+S VTTP + +RDA+NP+GLL+IAEET  EFLSKATGTA+DWVQMPGMK
Sbjct: 132 QNTSLANDTSCESNVTTPPNPIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 191

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDSVGI AIS  C GVAARACGLV+LEPTK+ EILKDRPSWFRDCRSLEVFTMFPAGN
Sbjct: 192 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSWFRDCRSLEVFTMFPAGN 251

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GT+EL+Y Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GPN ASA QFV
Sbjct: 252 GGTVELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASAQQFV 311

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEMLPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT       
Sbjct: 312 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 371

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV++A 
Sbjct: 372 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVVAC 431

Query: 424 NSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSA 483
           NSTK +   SN   +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A
Sbjct: 432 NSTKKIRNNSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNMDAYLA 491

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
           +SLK  + + PG+RP RF+G Q+IMPL HT+E+EE+LEV+RLEG  L  ++A +SRDIHL
Sbjct: 492 SSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHL 551

Query: 544 LQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTL 603
           LQ+C+G+DE +VG+  +LVFAPIDE FPDD PL+ SGFR+IPLD KT    D + + RTL
Sbjct: 552 LQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDMKT----DGVASGRTL 607

Query: 604 DLTSSLEVGPATNPAAGDSS--SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           DL SSL+VG A   A+GD+S   C + RSVLTIAFQFP+E +LQD+VATMARQYVR V+S
Sbjct: 608 DLASSLDVGSAAPQASGDASPDDC-NLRSVLTIAFQFPYEMHLQDSVATMARQYVRGVVS 666

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVL 721
           +VQRV+MAI PS      G ++  G PEA TLA W+CQSY YHLG ELL      G+++L
Sbjct: 667 AVQRVSMAISPSQSGLNAGQRMLSGFPEAATLARWVCQSYHYHLGLELLNQSDEAGEALL 726

Query: 722 KNLWQHSDAILCCSLK 737
           K LW H DA+LCCS K
Sbjct: 727 KMLWHHPDAVLCCSFK 742


>gi|82908746|gb|ABB93543.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908758|gb|ABB93549.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908766|gb|ABB93553.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908776|gb|ABB93558.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908792|gb|ABB93566.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908814|gb|ABB93577.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908824|gb|ABB93582.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908842|gb|ABB93591.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
          Length = 842

 Score = 1087 bits (2811), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/738 (72%), Positives = 607/738 (82%), Gaps = 26/738 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K+ +D  KYVRYT+EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 11  KNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 70

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL+ A  A T
Sbjct: 71  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNASVAAT 130

Query: 141 DASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           D SC+SVVT        TPQH  RDA+ PAGLLSIAEETLAEFLSKA G AVDWVQMPGM
Sbjct: 131 DTSCESVVTSGQHQHNPTPQHPPRDAS-PAGLLSIAEETLAEFLSKAKGAAVDWVQMPGM 189

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI AIS +C+GVAARACGLV L+PTK+AEILKDRPSW RDCR L+V T FP G
Sbjct: 190 KPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTAFPTG 249

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIELLY Q YA TTLA ARDFWTLRYTT L++GSLVVCERSLSG+  GP+      F
Sbjct: 250 NGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHF 309

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAEMLPSG LI+PC+GGGSII IVDH++LE WSVPEVLRPLYESS V+AQ+MTIA    
Sbjct: 310 VRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E +GEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF DDGWSL+  DG EDV IA
Sbjct: 370 LRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDGVEDVTIA 429

Query: 423 VNST--KSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           +NS+  K  ++  N +N L  L GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+D
Sbjct: 430 INSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADSNID 489

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAA+LKA  Y+ PG R   F+GSQ+I+PL HT+EHEE LEVI+LEGH L QE+A +SR
Sbjct: 490 AYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSR 549

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D+ LLQ+CSG+DENA GAC+ELVFAPIDE F DD PLLPSGFR+IPL+S+T  +      
Sbjct: 550 DMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGG---P 606

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           +RTLDL S+LEVG A    +GDS +  + RSVLTIAFQF +ES+L++NVA MARQYVRSV
Sbjct: 607 NRTLDLASALEVGSAGTRTSGDSGTNSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSV 666

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMA+ PS LS  +GP+  PG+PEALTLA WICQSY  H+G +L R+D    +S
Sbjct: 667 VASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASES 726

Query: 720 VLKNLWQHSDAILCCSLK 737
           VLK LW HSDAI+CCS+K
Sbjct: 727 VLKLLWHHSDAIMCCSVK 744


>gi|82908650|gb|ABB93495.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908654|gb|ABB93497.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908656|gb|ABB93498.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908658|gb|ABB93499.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908660|gb|ABB93500.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908662|gb|ABB93501.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908664|gb|ABB93502.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908666|gb|ABB93503.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908668|gb|ABB93504.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908670|gb|ABB93505.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908672|gb|ABB93506.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908674|gb|ABB93507.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908676|gb|ABB93508.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908678|gb|ABB93509.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908680|gb|ABB93510.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908682|gb|ABB93511.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908684|gb|ABB93512.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908686|gb|ABB93513.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908688|gb|ABB93514.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908690|gb|ABB93515.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908692|gb|ABB93516.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908694|gb|ABB93517.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908696|gb|ABB93518.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908698|gb|ABB93519.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908700|gb|ABB93520.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908702|gb|ABB93521.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908704|gb|ABB93522.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908706|gb|ABB93523.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908708|gb|ABB93524.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908710|gb|ABB93525.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908712|gb|ABB93526.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908714|gb|ABB93527.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908716|gb|ABB93528.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908718|gb|ABB93529.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908720|gb|ABB93530.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908722|gb|ABB93531.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908724|gb|ABB93532.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908726|gb|ABB93533.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908728|gb|ABB93534.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908730|gb|ABB93535.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908732|gb|ABB93536.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908734|gb|ABB93537.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908736|gb|ABB93538.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908738|gb|ABB93539.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908740|gb|ABB93540.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908742|gb|ABB93541.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908744|gb|ABB93542.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908748|gb|ABB93544.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908750|gb|ABB93545.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908752|gb|ABB93546.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908754|gb|ABB93547.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908756|gb|ABB93548.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908760|gb|ABB93550.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908762|gb|ABB93551.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908764|gb|ABB93552.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908768|gb|ABB93554.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908770|gb|ABB93555.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908772|gb|ABB93556.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908774|gb|ABB93557.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908778|gb|ABB93559.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908780|gb|ABB93560.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908782|gb|ABB93561.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908784|gb|ABB93562.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908786|gb|ABB93563.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908788|gb|ABB93564.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908790|gb|ABB93565.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908794|gb|ABB93567.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908796|gb|ABB93568.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908798|gb|ABB93569.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908800|gb|ABB93570.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908802|gb|ABB93571.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908804|gb|ABB93572.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908806|gb|ABB93573.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908808|gb|ABB93574.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908810|gb|ABB93575.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908812|gb|ABB93576.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908816|gb|ABB93578.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908818|gb|ABB93579.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908820|gb|ABB93580.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908822|gb|ABB93581.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908826|gb|ABB93583.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908828|gb|ABB93584.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908830|gb|ABB93585.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908832|gb|ABB93586.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908834|gb|ABB93587.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908836|gb|ABB93588.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908838|gb|ABB93589.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908840|gb|ABB93590.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908844|gb|ABB93592.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82909691|gb|ABB94009.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909693|gb|ABB94010.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909695|gb|ABB94011.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909697|gb|ABB94012.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909699|gb|ABB94013.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909701|gb|ABB94014.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909703|gb|ABB94015.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909705|gb|ABB94016.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909707|gb|ABB94017.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909709|gb|ABB94018.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909711|gb|ABB94019.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909713|gb|ABB94020.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909715|gb|ABB94021.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909717|gb|ABB94022.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909719|gb|ABB94023.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909721|gb|ABB94024.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909723|gb|ABB94025.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909725|gb|ABB94026.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909727|gb|ABB94027.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909729|gb|ABB94028.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909731|gb|ABB94029.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909733|gb|ABB94030.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909737|gb|ABB94032.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909739|gb|ABB94033.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909741|gb|ABB94034.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909743|gb|ABB94035.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909745|gb|ABB94036.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909747|gb|ABB94037.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909749|gb|ABB94038.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909751|gb|ABB94039.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909753|gb|ABB94040.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909755|gb|ABB94041.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909757|gb|ABB94042.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909759|gb|ABB94043.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909761|gb|ABB94044.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909763|gb|ABB94045.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909765|gb|ABB94046.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909767|gb|ABB94047.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909769|gb|ABB94048.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909771|gb|ABB94049.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909773|gb|ABB94050.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909775|gb|ABB94051.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909777|gb|ABB94052.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909779|gb|ABB94053.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909781|gb|ABB94054.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909783|gb|ABB94055.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909785|gb|ABB94056.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909787|gb|ABB94057.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909789|gb|ABB94058.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909791|gb|ABB94059.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909793|gb|ABB94060.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909795|gb|ABB94061.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909797|gb|ABB94062.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909799|gb|ABB94063.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909801|gb|ABB94064.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909803|gb|ABB94065.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909805|gb|ABB94066.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909807|gb|ABB94067.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909809|gb|ABB94068.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909811|gb|ABB94069.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909813|gb|ABB94070.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909815|gb|ABB94071.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909817|gb|ABB94072.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909819|gb|ABB94073.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909821|gb|ABB94074.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909823|gb|ABB94075.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909825|gb|ABB94076.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909827|gb|ABB94077.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909829|gb|ABB94078.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909831|gb|ABB94079.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909833|gb|ABB94080.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909835|gb|ABB94081.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909837|gb|ABB94082.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909839|gb|ABB94083.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909841|gb|ABB94084.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909843|gb|ABB94085.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909845|gb|ABB94086.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909847|gb|ABB94087.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909849|gb|ABB94088.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909851|gb|ABB94089.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909853|gb|ABB94090.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909855|gb|ABB94091.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909857|gb|ABB94092.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909859|gb|ABB94093.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909861|gb|ABB94094.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909863|gb|ABB94095.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909865|gb|ABB94096.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909867|gb|ABB94097.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909869|gb|ABB94098.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909873|gb|ABB94100.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909875|gb|ABB94101.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909877|gb|ABB94102.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909879|gb|ABB94103.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909881|gb|ABB94104.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909883|gb|ABB94105.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909885|gb|ABB94106.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909887|gb|ABB94107.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909889|gb|ABB94108.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909891|gb|ABB94109.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909893|gb|ABB94110.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909895|gb|ABB94111.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909897|gb|ABB94112.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909899|gb|ABB94113.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909901|gb|ABB94114.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909903|gb|ABB94115.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909905|gb|ABB94116.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909907|gb|ABB94117.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909909|gb|ABB94118.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909911|gb|ABB94119.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909913|gb|ABB94120.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909915|gb|ABB94121.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909917|gb|ABB94122.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909919|gb|ABB94123.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909921|gb|ABB94124.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909923|gb|ABB94125.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909925|gb|ABB94126.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909927|gb|ABB94127.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909929|gb|ABB94128.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score = 1087 bits (2810), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/738 (72%), Positives = 607/738 (82%), Gaps = 26/738 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K+ +D  KYVRYT+EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 11  KNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 70

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL+ A  A T
Sbjct: 71  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNASVAAT 130

Query: 141 DASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           D SC+SVVT        TPQH  RDA+ PAGLLSIAEETLAEFLSKA G AVDWVQMPGM
Sbjct: 131 DTSCESVVTSGQHQHNPTPQHPPRDAS-PAGLLSIAEETLAEFLSKAKGAAVDWVQMPGM 189

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI AIS +C+GVAARACGLV L+PTK+AEILKDRPSW RDCR L+V T FP G
Sbjct: 190 KPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTAFPTG 249

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIELLY Q YA TTLA ARDFWTLRYTT L++GSLVVCERSLSG+  GP+      F
Sbjct: 250 NGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHF 309

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAEMLPSG LI+PC+GGGSII IVDH++LE WSVPEVLRPLYESS V+AQ+MTIA    
Sbjct: 310 VRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E +GEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF DDGWSL+  DG EDV IA
Sbjct: 370 LRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDGVEDVTIA 429

Query: 423 VNST--KSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           +NS+  K  ++  N +N L  L GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+D
Sbjct: 430 INSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADSNID 489

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAA+LKA  Y+ PG R   F+GSQ+I+PL HT+EHEE LEVI+LEGH L QE+A +SR
Sbjct: 490 AYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSR 549

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D+ LLQ+CSG+DENA GAC+ELVFAPIDE F DD PLLPSGFR+IPL+S+T  +      
Sbjct: 550 DMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGG---P 606

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           +RTLDL S+LEVG A    +GDS +  + RSVLTIAFQF +ES+L++NVA MARQYVRSV
Sbjct: 607 NRTLDLASALEVGSAGTRTSGDSGANSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSV 666

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMA+ PS LS  +GP+  PG+PEALTLA WICQSY  H+G +L R+D    +S
Sbjct: 667 VASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASES 726

Query: 720 VLKNLWQHSDAILCCSLK 737
           VLK LW HSDAI+CCS+K
Sbjct: 727 VLKLLWHHSDAIMCCSVK 744


>gi|82909735|gb|ABB94031.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score = 1086 bits (2809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/738 (72%), Positives = 607/738 (82%), Gaps = 26/738 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K+ +D  KYVRYT+EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 11  KNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 70

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL+ A  A T
Sbjct: 71  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNASVAAT 130

Query: 141 DASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           D SC+SVVT        TPQH  RDA+ PAGLLSIAEETLAEFLSKA G AVDWVQMPGM
Sbjct: 131 DTSCESVVTSGQHQHNPTPQHPPRDAS-PAGLLSIAEETLAEFLSKAKGAAVDWVQMPGM 189

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI AIS +C+GVAARACGLV L+PTK+AEILKDRPSW RDCR L+V T FP G
Sbjct: 190 KPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTAFPTG 249

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIELLY Q YA TTLA ARDFWTLRYTT L++GSLVVCERSLSG+  GP+      F
Sbjct: 250 NGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHF 309

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAEMLPSG LI+PC+GGGSII IVDH++LE WSVPEVLRPLYESS V+AQ+MTIA    
Sbjct: 310 VRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E +GEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF DDGWSL+  DG EDV IA
Sbjct: 370 LRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDGVEDVTIA 429

Query: 423 VNST--KSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           +NS+  K  ++  N +N L  L GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+D
Sbjct: 430 INSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADSNID 489

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAA+LKA  Y+ PG R   F+GSQ+I+PL HT+EHEE LEVI+LEGH L QE+A +SR
Sbjct: 490 AYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSR 549

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D+ LLQ+CSG+DENA GAC+ELVFAPIDE F DD PLLPSGFR+IPL+S+T  +      
Sbjct: 550 DMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGG---P 606

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           +RTLDL S+LEVG A    +GDS +  + RSVLTIAFQF +ES+L++NVA MARQYVRSV
Sbjct: 607 NRTLDLASALEVGSAGTRTSGDSGANSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSV 666

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMA+ PS LS  +GP+  PG+PEALTLA WICQSY  H+G +L R+D    +S
Sbjct: 667 VASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASES 726

Query: 720 VLKNLWQHSDAILCCSLK 737
           VLK LW HSDAI+CCS+K
Sbjct: 727 VLKLLWHHSDAIMCCSVK 744


>gi|162459714|ref|NP_001105994.1| rolled leaf 2 [Zea mays]
 gi|82754245|gb|ABB89930.1| rolled leaf 2 [Zea mays]
          Length = 840

 Score = 1086 bits (2809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/736 (70%), Positives = 607/736 (82%), Gaps = 18/736 (2%)

Query: 15  SSSGSINK-HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           S SG  +K   +D+GKYVRYT EQVE LER+Y +CPKPSS RRQQL+RECPILSNIEPKQ
Sbjct: 12  SDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQ 71

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           IKVWFQNRRCR+KQRKE+SRLQ VNR+LTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL
Sbjct: 72  IKVWFQNRRCRDKQRKESSRLQAVNRRLTAMNKLLMEENERLQKQVSQLVHENAHMRQQL 131

Query: 134 RTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           +      D SC+S VT P +++RDA+NP+GLL+IAEET  EFLSKATGTA+DWVQMPGMK
Sbjct: 132 QNTSLANDTSCESNVTAPPNAIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 191

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDSVGI AIS  C GVAARACGLV+LEPTK+ EILKDRPSWFRDCRSLEVFTMFPAGN
Sbjct: 192 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSWFRDCRSLEVFTMFPAGN 251

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+Y Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSL+GSG GPN ASA QFV
Sbjct: 252 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQFV 311

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEMLPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT       
Sbjct: 312 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 371

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV++A 
Sbjct: 372 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVVAC 431

Query: 424 NSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSA 483
           NSTK +   SN   +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A
Sbjct: 432 NSTKKIRNNSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLA 491

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
           +SLK  + + PG+RP RF+G Q+IMPL HT+E+EE+LEV+RLEG  L  ++A +SRDIHL
Sbjct: 492 SSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHL 551

Query: 544 LQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTL 603
           LQ+C+G+DE +VG+  +LVFAPIDE FPDD PL+ SGFR+IPLD KT    D +++ RTL
Sbjct: 552 LQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDMKT----DGVSSGRTL 607

Query: 604 DLTSSLEVGPATNPAAGDS--SSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           DL SSL+VG A   A+GD+    C + RSVLTIAFQFP+E +LQD+VATMARQYVRSV+S
Sbjct: 608 DLASSLDVGSAAPQASGDAPPDDC-NLRSVLTIAFQFPYEMHLQDSVATMARQYVRSVVS 666

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVL 721
           +VQRV+MAI PS      G ++  G PEA TLA W+CQSY YHLG ELL      G+++L
Sbjct: 667 AVQRVSMAISPSQSGLNAGQRMLSGFPEAATLARWVCQSYHYHLGVELLNQSDEAGEALL 726

Query: 722 KNLWQHSDAILCCSLK 737
           K LW H DA+LCCS K
Sbjct: 727 KMLWHHPDAVLCCSFK 742


>gi|187609457|sp|A2Z8L4.2|HOX9_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX9; AltName:
           Full=HD-ZIP protein HOX9; AltName: Full=Homeodomain
           transcription factor HOX9; AltName: Full=OsHB2; AltName:
           Full=OsHox9
          Length = 840

 Score = 1086 bits (2809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/747 (71%), Positives = 613/747 (82%), Gaps = 15/747 (2%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MA  +  +     +   G  +K  +D+GKYVRYT EQVEALERVY+ECPKPSS RRQQL+
Sbjct: 1   MAAAVAMRSGSGSDGGGGGYDKAGMDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLL 60

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           R+CPIL+NIEPKQIKVWFQNRRCR+KQRKEASRLQ VNRKLTAMNKLLMEEN+RLQKQVS
Sbjct: 61  RDCPILANIEPKQIKVWFQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVS 120

Query: 121 QLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 180
           QLV EN YMKQQL+      D SC+S VTTPQ+ LRDA+NP+GLL+IAEETL EFLSKAT
Sbjct: 121 QLVHENAYMKQQLQNPSLGNDTSCESNVTTPQNPLRDASNPSGLLTIAEETLTEFLSKAT 180

Query: 181 GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDC 240
           GTAVDWV MPGMKPGPDS GI A+S  C GVAARACGLV+LEPTKI EILKDRPSWFRDC
Sbjct: 181 GTAVDWVPMPGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDC 240

Query: 241 RSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS 300
           RSLEVFTMFPAGN GTIEL+Y Q YAPTTL PARDFWTLRYTTT+D+GSLVVCERSLSGS
Sbjct: 241 RSLEVFTMFPAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMDDGSLVVCERSLSGS 300

Query: 301 GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV 360
           G GP+ ASA QFVRAEMLPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+V
Sbjct: 301 GGGPSTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV 360

Query: 361 VAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL 410
           VAQ+MT A          ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+
Sbjct: 361 VAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSV 420

Query: 411 MTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHR 470
           M  DG EDVIIA N+ K  +T+++  N+    GG++CAKASMLLQ+VPPA+LVRFLREHR
Sbjct: 421 MGGDGIEDVIIACNAKKVRNTSTS-ANAFVTPGGVICAKASMLLQSVPPAVLVRFLREHR 479

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 530
           SEWAD+N DAYSA+SLK  S + PG+RP RF+GSQIIMPL HT+E+EE+LEV+RLEG +L
Sbjct: 480 SEWADYNFDAYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQAL 539

Query: 531 AQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
             +D  +SRDIHLLQ+C+G+DE ++G+C +LVFAPIDE+FPDD PL+ SGFR+IPLD KT
Sbjct: 540 THDDGLMSRDIHLLQLCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKT 599

Query: 591 PDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
             TP    A RTLDL SSLEVG    P    S    + RSVLTIAFQFP+E +LQD+VAT
Sbjct: 600 DGTP----AGRTLDLASSLEVGSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVAT 655

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELL 710
           MARQYVRS++SSVQRV+MAI PS      G K+  G PEA TLA WICQSY +HLG ELL
Sbjct: 656 MARQYVRSIVSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELL 715

Query: 711 RSDSVGGDSVLKNLWQHSDAILCCSLK 737
           R     G+++LK LW + DAILCCS K
Sbjct: 716 RQADDAGEALLKMLWDYEDAILCCSFK 742


>gi|317160480|gb|ADV04322.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 842

 Score = 1086 bits (2808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/738 (72%), Positives = 607/738 (82%), Gaps = 26/738 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K+ +D  KYVRYT+EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 11  KNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 70

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL+ A  A T
Sbjct: 71  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNASVAAT 130

Query: 141 DASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           D SC+SVVT        TPQH  RDA+ PAGLLSIAEETLAEFLSKA G AVDWVQMPGM
Sbjct: 131 DTSCESVVTSGQHQHNPTPQHPPRDAS-PAGLLSIAEETLAEFLSKAKGAAVDWVQMPGM 189

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI AIS +C+GVAARACGLV L+PTK+AEILKDRPSW RDCR L+V T FP G
Sbjct: 190 KPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTAFPTG 249

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIELLY Q YA TTLA ARDFWTLRYTT L++GSLVVCERSLSG+  GP+      F
Sbjct: 250 NGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHF 309

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAEMLPSG LI+PC+GGGSII IVDH++LE WSVPEVLRPLYESS V+AQ+MTIA    
Sbjct: 310 VRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E +GEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF DDGWSL+  DG EDV IA
Sbjct: 370 LRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDGVEDVTIA 429

Query: 423 VNST--KSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           +NS+  K  ++  N +N L  L GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+D
Sbjct: 430 INSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADSNID 489

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAA+LKA  Y+ PG R   F+GSQ+I+PL HT+EHEE LEVI+LEGH L QE+A +SR
Sbjct: 490 AYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSR 549

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D+ LLQ+CSG+DENA GAC+ELVFAPIDE F DD PLLPSGFR+IPL+S+T  +      
Sbjct: 550 DMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGG---P 606

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           +RTLDL S+LEVG A    +GDS +  + RSVLTIAFQF +ES+L++NVA MARQYVRSV
Sbjct: 607 NRTLDLASALEVGSAGARTSGDSGANSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSV 666

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMA+ PS LS  +GP+  PG+PEALTLA WICQSY  H+G +L R+D    +S
Sbjct: 667 VASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASES 726

Query: 720 VLKNLWQHSDAILCCSLK 737
           VLK LW HSDAI+CCS+K
Sbjct: 727 VLKLLWHHSDAIMCCSVK 744


>gi|82908652|gb|ABB93496.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
          Length = 842

 Score = 1086 bits (2808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/738 (72%), Positives = 607/738 (82%), Gaps = 26/738 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K+ +D  KYVRYT+EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 11  KNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 70

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL+ A  A T
Sbjct: 71  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNASVAAT 130

Query: 141 DASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           D SC+SVVT        TPQH  RDA+ PAGLLSIAEETLAEFLSKA G AVDWVQMPGM
Sbjct: 131 DTSCESVVTSGQHQHNPTPQHPPRDAS-PAGLLSIAEETLAEFLSKAKGAAVDWVQMPGM 189

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI AIS +C+GVAARACGLV L+PTK+AE+LKDRPSW RDCR L+V T FP G
Sbjct: 190 KPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEVLKDRPSWLRDCRCLDVLTAFPTG 249

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIELLY Q YA TTLA ARDFWTLRYTT L++GSLVVCERSLSG+  GP+      F
Sbjct: 250 NGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHF 309

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAEMLPSG LI+PC+GGGSII IVDH++LE WSVPEVLRPLYESS V+AQ+MTIA    
Sbjct: 310 VRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E +GEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF DDGWSL+  DG EDV IA
Sbjct: 370 LRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDGVEDVTIA 429

Query: 423 VNST--KSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           +NS+  K  ++  N +N L  L GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+D
Sbjct: 430 INSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADSNID 489

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAA+LKA  Y+ PG R   F+GSQ+I+PL HT+EHEE LEVI+LEGH L QE+A +SR
Sbjct: 490 AYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSR 549

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D+ LLQ+CSG+DENA GAC+ELVFAPIDE F DD PLLPSGFR+IPL+S+T  +      
Sbjct: 550 DMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGG---P 606

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           +RTLDL S+LEVG A    +GDS +  + RSVLTIAFQF +ES+L++NVA MARQYVRSV
Sbjct: 607 NRTLDLASALEVGSAGTRTSGDSGANSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSV 666

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMA+ PS LS  +GP+  PG+PEALTLA WICQSY  H+G +L R+D    +S
Sbjct: 667 VASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASES 726

Query: 720 VLKNLWQHSDAILCCSLK 737
           VLK LW HSDAI+CCS+K
Sbjct: 727 VLKLLWHHSDAIMCCSVK 744


>gi|89514873|gb|ABD75311.1| class III homeodomain-leucine zipper protein C3HDZ1 [Taxus globosa]
          Length = 837

 Score = 1085 bits (2807), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/738 (72%), Positives = 608/738 (82%), Gaps = 27/738 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K+ +D  KYVRYT+EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 7   KNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 66

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL+ A  ATT
Sbjct: 67  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNASVATT 126

Query: 141 DASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           D SC+SVVT        TPQH LRDA+ PAGLLSIAEETLAEFL KATGTAVDWVQMPGM
Sbjct: 127 DTSCESVVTSGQHQHNPTPQHPLRDAS-PAGLLSIAEETLAEFLLKATGTAVDWVQMPGM 185

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI AIS SC+GVAARACGLV LEPTK+AEILKDRPSW RDCR L+V T FP G
Sbjct: 186 KPGPDSIGIVAISHSCTGVAARACGLVGLEPTKVAEILKDRPSWLRDCRCLDVLTAFPTG 245

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIELLY Q YAPTTLA ARDFWTLRYTT L++GSLVVCERSL+ +  GP+      F
Sbjct: 246 NGGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLNSTQGGPSMPPVPHF 305

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAEMLPSG LIRPC+GGGSII IVDH++LE WSVPEVLRPLYESS ++AQ+MTIA    
Sbjct: 306 VRAEMLPSGYLIRPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTILAQKMTIAALRR 365

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E +GEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF DDGWS M  DG EDV I 
Sbjct: 366 LRQIAQEVTGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSSMGSDGVEDVTIV 425

Query: 423 VNS--TKSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           +NS  +K + +  N +N L  L GGILCAKASMLLQNVPPALLVRFLREHRSEWAD ++D
Sbjct: 426 INSSPSKLVGSQVNSSNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADCSMD 485

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAA+LKA  Y  PG R   F+GSQ+I+PL HT+EHEE LEVI+LEGH L QE+A +SR
Sbjct: 486 AYSAAALKASPYCLPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSR 545

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D+ LLQ+CSG+DE+A GAC++LVFAPIDE F DD PLLPSGFR+IPL+S+T        A
Sbjct: 546 DMFLLQLCSGIDESAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLESRTVSA----GA 601

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           +RTLDL S+LEVG   + A+GDS +  + RSVLTIAFQF +E++L++NVA MARQYVRSV
Sbjct: 602 NRTLDLASALEVGSTGSRASGDSGANSNLRSVLTIAFQFTYENHLRENVAAMARQYVRSV 661

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMA+ PS L+P +GP+  PG+PEALTLA WIC SY  HLG +LL +D    D+
Sbjct: 662 VASVQRVAMALAPSRLNPHIGPRPPPGTPEALTLARWICHSYRLHLGVDLLPADCEASDA 721

Query: 720 VLKNLWQHSDAILCCSLK 737
           +LK LW HSDAI+CCSLK
Sbjct: 722 LLKMLWHHSDAIMCCSLK 739


>gi|296086017|emb|CBI31458.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score = 1085 bits (2806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/722 (72%), Positives = 610/722 (84%), Gaps = 17/722 (2%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           KYVRYTAEQVEALERVY+ECPKPSS RRQQLIRECPILSNIE KQIKVWFQNRRCREKQ+
Sbjct: 27  KYVRYTAEQVEALERVYAECPKPSSTRRQQLIRECPILSNIESKQIKVWFQNRRCREKQK 86

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT-DASCDSV 147
           KEA +LQ+VN+KL +MNKLLMEEN+RLQKQVSQLV ENGYMKQQL+   ATT D  CDS+
Sbjct: 87  KEAVQLQSVNKKLNSMNKLLMEENERLQKQVSQLVYENGYMKQQLQNVTATTTDTRCDSL 146

Query: 148 VTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQS 207
           V TPQHS R  NNP GLLSIAEE + EFLSKA GTAVDWVQ+PGMKPGPDSVG  AIS S
Sbjct: 147 VATPQHSSRTGNNPIGLLSIAEEAMGEFLSKAKGTAVDWVQIPGMKPGPDSVGTVAISHS 206

Query: 208 CSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAP 267
           C+GVAARAC LVSLEPT+I EILKDR SWFRDCR LEVF  FPAGN G +EL+Y Q YAP
Sbjct: 207 CNGVAARACSLVSLEPTEIMEILKDRQSWFRDCRKLEVFAKFPAGNGGILELIYMQVYAP 266

Query: 268 TTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPC 327
           TTLAPARDFWTLRYT++L++GSLVVCERS+SGSGAGPNP++A+QFVRA+MLPSG LIRPC
Sbjct: 267 TTLAPARDFWTLRYTSSLEDGSLVVCERSMSGSGAGPNPSTASQFVRAKMLPSGYLIRPC 326

Query: 328 DGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEVVYG 377
           +GGGSIIHIVDHL+LEAWSVPEVL+PLY+SSK+VAQ+MT+A          ETSG+V + 
Sbjct: 327 EGGGSIIHIVDHLDLEAWSVPEVLQPLYKSSKLVAQKMTVAALHHIRQIAQETSGDVTHT 386

Query: 378 LGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTN 437
           LG+QPAVLR F Q+LSRGFNDA+NGFNDDGWSLM  DGAED+II+VNS K+LST SN T 
Sbjct: 387 LGKQPAVLRAFRQKLSRGFNDAINGFNDDGWSLMQIDGAEDLIISVNSAKNLSTISNSTA 446

Query: 438 SLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMR 497
           +L+  GGILC KA+MLLQNV P+L+VRFLREHRSEWADF+VDAY+AASL+  S+A PG+ 
Sbjct: 447 ALSLPGGILCVKAAMLLQNVSPSLMVRFLREHRSEWADFSVDAYAAASLRGDSFALPGLS 506

Query: 498 PTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVS-RDIHLLQICSGVDENAVG 556
           P++F+G+Q  M LG T E+ E+LE+I+LEGH+L+QE+A V  R+IHLLQIC+GVD+NA  
Sbjct: 507 PSQFSGNQTTMSLGITAEN-EILEIIQLEGHALSQEEASVMWRNIHLLQICNGVDDNAGE 565

Query: 557 ACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATN 616
           ACSELVF+PIDEMFPDD P+L SGFRI+ LD+KT D  D L A R ++L S+LEV   ++
Sbjct: 566 ACSELVFSPIDEMFPDDAPILSSGFRILELDAKTCDRQDMLAAKRMMNLASNLEV--RSS 623

Query: 617 PAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLS 676
            A G ++S   +RSVL IAFQF FES+LQ NV TMARQY R+VISSVQRVAMAI PSGL 
Sbjct: 624 DATGCTASSSDSRSVLIIAFQFLFESHLQGNVVTMARQYARNVISSVQRVAMAITPSGLH 683

Query: 677 PTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSL 736
               PK + GSPEALTLA WICQSYS+HLG +LL+S+  GGDSVLK LW H DAILCCSL
Sbjct: 684 GR--PKSTSGSPEALTLARWICQSYSFHLGDQLLKSNYHGGDSVLKQLWHHQDAILCCSL 741

Query: 737 KV 738
           K+
Sbjct: 742 KL 743


>gi|82909871|gb|ABB94099.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score = 1084 bits (2803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/738 (72%), Positives = 606/738 (82%), Gaps = 26/738 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K+ +D  KYVRYT+EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 11  KNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 70

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL+ A  A T
Sbjct: 71  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNASVAAT 130

Query: 141 DASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           D SC+SVVT        TPQH  RDA+ PAGLLSIAEETLAEFLSKA G AVDWVQMPGM
Sbjct: 131 DTSCESVVTSGQHQHNPTPQHPPRDAS-PAGLLSIAEETLAEFLSKAKGAAVDWVQMPGM 189

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI AIS +C+GVAARACGLV L+PTK+AEILKDRPSW RDCR L+V T FP G
Sbjct: 190 KPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTAFPTG 249

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIELLY Q YA TTLA ARDFWTLRYTT L++GSLVVCERSLSG+  GP+      F
Sbjct: 250 NGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHF 309

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAEMLPSG LI+PC+GGGSII IVDH++LE WSVPEVLRPLYESS V+AQ+MTIA    
Sbjct: 310 VRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E +GEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF DDGWSL+  DG EDV IA
Sbjct: 370 LRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDGVEDVTIA 429

Query: 423 VNST--KSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           +NS+  K  ++  N +N L  L GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+D
Sbjct: 430 INSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADSNID 489

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAA+LKA  Y+ PG R   F+GSQ+I+PL HT+EHEE LEVI+LEGH L QE+A +SR
Sbjct: 490 AYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSR 549

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D+ LLQ+CSG+DENA GAC+ELVFAPIDE F DD PLLPSGFR+IPL+S+T  +      
Sbjct: 550 DMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGG---P 606

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           +RTLDL S+LEVG A    +GDS +  + RSVLTIAFQF +ES+L++NVA MARQYVRSV
Sbjct: 607 NRTLDLASALEVGSAGTRTSGDSGANSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSV 666

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMA+ PS LS  + P+  PG+PEALTLA WICQSY  H+G +L R+D    +S
Sbjct: 667 VASVQRVAMALAPSRLSAHVSPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASES 726

Query: 720 VLKNLWQHSDAILCCSLK 737
           VLK LW HSDAI+CCS+K
Sbjct: 727 VLKLLWHHSDAIMCCSVK 744


>gi|110349540|gb|ABG73245.1| class III HD-Zip protein HDZ31 [Pinus taeda]
          Length = 842

 Score = 1084 bits (2803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/738 (72%), Positives = 605/738 (81%), Gaps = 26/738 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K+ +D  KYVRYT+EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 11  KNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 70

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL+ A  A T
Sbjct: 71  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNASVAAT 130

Query: 141 DASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           D SC+SVVT        TPQH  RDA+ PAGLLSIAEETL EFLSKA G AVDWVQMPGM
Sbjct: 131 DTSCESVVTSGQHQHNPTPQHPPRDAS-PAGLLSIAEETLTEFLSKAKGAAVDWVQMPGM 189

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI AIS +C+GVAARACGLV L+PTK+AEILKDRPSW RDCR L+V T FP G
Sbjct: 190 KPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTAFPTG 249

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIELLY Q YA TTLA ARDFWTLRYTT L++GSLVVCERSLSG+  GP+      F
Sbjct: 250 NGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHF 309

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAEMLPSG LI+PC+GGGSII IVDH++LE WSVPEVLRPLYESS V+AQ+MTIA    
Sbjct: 310 VRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E +GEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF DDGWSLM  DG EDV IA
Sbjct: 370 LRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGSDGVEDVTIA 429

Query: 423 VNST--KSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           +NS+  K  ++  N +N L  L GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+D
Sbjct: 430 INSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADSNID 489

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAA+LK+  Y+ PG R   F+GSQ+I+PL HT+EHEE LEVI+LEGH L QE+A +SR
Sbjct: 490 AYSAAALKSSPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSR 549

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D+ LLQ+CSG+DENA GAC+ELVFAPIDE F DD PLLPSGFR+IPL+S+T  +      
Sbjct: 550 DMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGG---P 606

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           +RTLDL S+LEVG      +GDS +  + RSVLTIAFQF +ES+L++NVA MARQYVRSV
Sbjct: 607 NRTLDLASALEVGSTGTRTSGDSGTSSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSV 666

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMAI PS L+  +GP+  PG+PEALTLA WICQSY  H+G +L R+D    +S
Sbjct: 667 VASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASES 726

Query: 720 VLKNLWQHSDAILCCSLK 737
           VLK LW HSDAI+CCS+K
Sbjct: 727 VLKLLWHHSDAIMCCSVK 744


>gi|359483944|ref|XP_003633041.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 3
           [Vitis vinifera]
          Length = 862

 Score = 1083 bits (2801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/750 (71%), Positives = 608/750 (81%), Gaps = 35/750 (4%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           +K Q+D+ KYVRYT EQVEALERVYSECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQN
Sbjct: 9   SKQQMDSSKYVRYTPEQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQN 68

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-AT 139
           RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL++A  AT
Sbjct: 69  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQSASTAT 128

Query: 140 TDASCDSVVT----------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
           TD SC+SVV           TPQH  RDA+NPAGLL+IAEETLAEFLSKATGTAVDWVQM
Sbjct: 129 TDTSCESVVMSGQHQQQQNPTPQHPQRDASNPAGLLAIAEETLAEFLSKATGTAVDWVQM 188

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
            GMKPGPDS+GI A+S++CSGVAARACGLVSLEPTK+AEILKDRPSWFRDCR L+V ++ 
Sbjct: 189 IGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCRCLDVLSVI 248

Query: 250 PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA 309
           P GN GTIEL+Y Q YAPTTLA ARDFWTLRYTT+L++GSLV+CERSL+ S  GP    A
Sbjct: 249 PTGNGGTIELIYMQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPA 308

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA- 368
           + ++RAEMLPSG LIRPC+GGGSIIHIVDH++L+AWSVPEVLRPLYESSK++AQ+ T+A 
Sbjct: 309 SSYIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKTTVAA 368

Query: 369 ---------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                    ETSGE+ YG GRQPAVLRTFSQRL RGFNDAVNGF DDGWSLM  DG EDV
Sbjct: 369 LRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFADDGWSLMGSDGVEDV 428

Query: 420 IIAVNS--TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
            I +NS  +K L    N T    F GG+LCAKASMLLQNVPPALLVRFLREHRSEWAD+ 
Sbjct: 429 TIVINSSPSKFLGPQYNSTMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYG 488

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
           VDAYSAA LKA  Y  P  RP  F  SQ+I+PL HT+EHEE LEV+RLEGH+ + ED  +
Sbjct: 489 VDAYSAACLKASPYEVPCARPGGFPSSQVILPLAHTVEHEEFLEVVRLEGHAFSPEDVAL 548

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTL 597
           +RD++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPLD KT    + L
Sbjct: 549 TRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKT--VCEAL 606

Query: 598 TAHRTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYV 656
              RTLDL S+LEVG     PA     + ++ RSVLTIAFQF FE++++DNVA MARQYV
Sbjct: 607 YIDRTLDLASTLEVGAGGARPANESDLNNYNLRSVLTIAFQFTFENHVRDNVAAMARQYV 666

Query: 657 RSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSY---------HLGA 707
           RSV++SVQRVAMAI PS LS  +G K  PGSPEALTLA WIC+SY +         H G 
Sbjct: 667 RSVMASVQRVAMAIAPSRLSSHMGLKPLPGSPEALTLARWICRSYRFDLDQLTSRIHTGG 726

Query: 708 ELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           ELLR DS GGD+VLK LW HSDAI+CCSLK
Sbjct: 727 ELLRVDSQGGDAVLKLLWNHSDAIMCCSLK 756


>gi|89514869|gb|ABD75309.1| class III homeodomain-leucine zipper protein C3HDZ1 [Pseudotsuga
           menziesii]
          Length = 842

 Score = 1082 bits (2798), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/738 (72%), Positives = 606/738 (82%), Gaps = 26/738 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K+ +D  KYVRYT+EQVEALERVYSECPKPSSLRRQQLIRECP+LSNIEPKQIKVWFQNR
Sbjct: 11  KNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPMLSNIEPKQIKVWFQNR 70

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL+ A  A T
Sbjct: 71  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNASVAAT 130

Query: 141 DASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           D SC+SVV+        TPQH  RDA+ PAGLLSIAEETLAEFLSKA G AVDWVQMPGM
Sbjct: 131 DTSCESVVSSGQHQHNPTPQHPPRDAS-PAGLLSIAEETLAEFLSKAKGAAVDWVQMPGM 189

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI AIS +C+GVAARACGLV L+PTK+AEILK+RPSW RDCR L+V T FP G
Sbjct: 190 KPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKERPSWLRDCRCLDVLTAFPTG 249

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIELLY Q YA TTLA ARDFWTLRYTT L++GSLVVCERSLSG+  GP+      F
Sbjct: 250 NGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHF 309

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAEMLPSG LI+PC+GGGSII IVDH++LE WSVPEVLRPLYESS V+AQ+MTIA    
Sbjct: 310 VRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E +GEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF DDGWSLM  DG EDV IA
Sbjct: 370 LRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGSDGVEDVTIA 429

Query: 423 VNST--KSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           +NS+  K   +  N +N L  L GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+D
Sbjct: 430 INSSPNKHFGSQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADSNID 489

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAA+LKA  Y+ PG R   F+GSQ+I+PL HT+EHEE LEVI+LEGH L QE+A +SR
Sbjct: 490 AYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSR 549

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D+ LLQ+CSG+DENA GAC+ELVFAPIDE F DD PLLPSGFRIIPL+S+T  +      
Sbjct: 550 DMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRIIPLESRTDGSGG---P 606

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           +RTLDL S+LEVG A    +GDS +  + RSVLTIAFQF +ES+L++NVA MARQYVR+V
Sbjct: 607 NRTLDLASALEVGSAGTRTSGDSGANSNLRSVLTIAFQFTYESHLRENVAAMARQYVRTV 666

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMA+ PS LS  +GP+  PG+PEALTLA WICQSY  H+G +L R+D    +S
Sbjct: 667 VASVQRVAMALAPSRLSSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCDASES 726

Query: 720 VLKNLWQHSDAILCCSLK 737
           VLK LW HSDAI+CCS+K
Sbjct: 727 VLKLLWHHSDAIMCCSVK 744


>gi|90110450|gb|ABD90527.1| class III homeodomain-leucine zipper [Pseudotsuga menziesii]
          Length = 842

 Score = 1080 bits (2794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/738 (72%), Positives = 605/738 (81%), Gaps = 26/738 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K+ +D  KYVRYT+EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 11  KNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 70

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL+ A  A T
Sbjct: 71  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNASVAAT 130

Query: 141 DASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           D SC+SVVT        TPQH  RDA+ PAGLLSIAEETLAEFLSKA G AVDWVQMPGM
Sbjct: 131 DTSCESVVTSGQHQHNPTPQHPPRDAS-PAGLLSIAEETLAEFLSKAKGAAVDWVQMPGM 189

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI AIS +C+GVAARACGLV L+PTK+AEILK+RPSW RDCR L+V T FP G
Sbjct: 190 KPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKERPSWLRDCRCLDVLTAFPTG 249

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIELLY Q YA TTLA ARDFWTLRYTT L++GSLVVCERSLSG+  GP+      F
Sbjct: 250 NGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHF 309

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAEMLPSG LI+PC+GGGSII IVDH++LE WSVPEVLRPLYESS V+AQ+MTIA    
Sbjct: 310 VRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E +GEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF DDGWSLM  DG EDV IA
Sbjct: 370 LRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGSDGVEDVTIA 429

Query: 423 VNST--KSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           +NS+  K   +  N +N L  L GGI CAKASMLLQNVPPALLVRFLREHRSEWAD N+D
Sbjct: 430 INSSPNKHFGSQVNASNGLTTLGGGIPCAKASMLLQNVPPALLVRFLREHRSEWADSNID 489

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAA+LKA  Y+ PG R   F+GSQ+I+PL HT+EHEE LEVI+LEGH L QE+A +SR
Sbjct: 490 AYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSR 549

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D+ LLQ+CSG+DENA GAC+ELVFAPIDE F DD PLLPSGFR+IPL+S+T  +      
Sbjct: 550 DMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGG---P 606

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           +RTLDL S+LEVG A    +GDS +  + RSVLTIAFQF +ES+L++NVA MARQYVR+V
Sbjct: 607 NRTLDLASALEVGSAGTRTSGDSGANSNLRSVLTIAFQFTYESHLRENVAAMARQYVRTV 666

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMA+ PS LS  +GP+  PG+PEALTLA WICQSY  H+G +L R+D    +S
Sbjct: 667 VASVQRVAMALAPSRLSSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCDASES 726

Query: 720 VLKNLWQHSDAILCCSLK 737
           VLK LW HSDAI+CCS+K
Sbjct: 727 VLKLLWHHSDAIMCCSVK 744


>gi|359483942|ref|XP_003633040.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 2
           [Vitis vinifera]
          Length = 859

 Score = 1080 bits (2794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/755 (71%), Positives = 607/755 (80%), Gaps = 42/755 (5%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           +K Q+D+ KYVRYT EQVEALERVYSECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQN
Sbjct: 9   SKQQMDSSKYVRYTPEQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQN 68

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-AT 139
           RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL++A  AT
Sbjct: 69  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQSASTAT 128

Query: 140 TDASCDSVVT----------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
           TD SC+SVV           TPQH  RDA+NPAGLL+IAEETLAEFLSKATGTAVDWVQM
Sbjct: 129 TDTSCESVVMSGQHQQQQNPTPQHPQRDASNPAGLLAIAEETLAEFLSKATGTAVDWVQM 188

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
            GMKPGPDS+GI A+S++CSGVAARACGLVSLEPTK+AEILKDRPSWFRDCR L+V ++ 
Sbjct: 189 IGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCRCLDVLSVI 248

Query: 250 PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA 309
           P GN GTIEL+Y Q YAPTTLA ARDFWTLRYTT+L++GSLV+CERSL+ S  GP    A
Sbjct: 249 PTGNGGTIELIYMQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPA 308

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA- 368
           + ++RAEMLPSG LIRPC+GGGSIIHIVDH++L+AWSVPEVLRPLYESSK++AQ+ T+A 
Sbjct: 309 SSYIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKTTVAA 368

Query: 369 ---------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                    ETSGE+ YG GRQPAVLRTFSQRL RGFNDAVNGF DDGWSLM  DG EDV
Sbjct: 369 LRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFADDGWSLMGSDGVEDV 428

Query: 420 IIAVNS--TKSLSTASNPTNSLAFLGGILCAKASML--------------LQNVPPALLV 463
            I +NS  +K L    N T    F GG+LCAKASML              LQNVPPALLV
Sbjct: 429 TIVINSSPSKFLGPQYNSTMFPTFGGGVLCAKASMLLQVHRKSRQPCYLNLQNVPPALLV 488

Query: 464 RFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVI 523
           RFLREHRSEWAD+ VDAYSAA LKA  Y  P  RP  F  SQ+I+PL HT+EHEE LEV+
Sbjct: 489 RFLREHRSEWADYGVDAYSAACLKASPYEVPCARPGGFPSSQVILPLAHTVEHEEFLEVV 548

Query: 524 RLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRI 583
           RLEGH+ + ED  ++RD++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+
Sbjct: 549 RLEGHAFSPEDVALTRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRV 608

Query: 584 IPLDSKTPDTPDTLTAHRTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLTIAFQFPFES 642
           IPLD KT    D   A RTLDL S+LEVG     PA     + ++ RSVLTIAFQF FE+
Sbjct: 609 IPLDPKT----DGPAATRTLDLASTLEVGAGGARPANESDLNNYNLRSVLTIAFQFTFEN 664

Query: 643 NLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYS 702
           +++DNVA MARQYVRSV++SVQRVAMAI PS LS  +G K  PGSPEALTLA WIC+SY 
Sbjct: 665 HVRDNVAAMARQYVRSVMASVQRVAMAIAPSRLSSHMGLKPLPGSPEALTLARWICRSYR 724

Query: 703 YHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
            H G ELLR DS GGD+VLK LW HSDAI+CCSLK
Sbjct: 725 IHTGGELLRVDSQGGDAVLKLLWNHSDAIMCCSLK 759


>gi|115482560|ref|NP_001064873.1| Os10g0480200 [Oryza sativa Japonica Group]
 gi|75168160|sp|Q9AV49.1|HOX9_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX9; AltName:
           Full=HD-ZIP protein HOX9; AltName: Full=Homeodomain
           transcription factor HOX9; AltName: Full=OsHB2; AltName:
           Full=OsHox9
 gi|13384370|gb|AAK21338.1|AC024594_2 putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|31432701|gb|AAP54299.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|78708820|gb|ABB47795.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|113639482|dbj|BAF26787.1| Os10g0480200 [Oryza sativa Japonica Group]
          Length = 840

 Score = 1080 bits (2794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/747 (71%), Positives = 612/747 (81%), Gaps = 15/747 (2%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MA  +  +     +   G  +K  +D+GKYVRYT EQVEALERVY+ECPKPSS RRQQL+
Sbjct: 1   MAAAVAMRSGSGSDGGGGGYDKAGMDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLL 60

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           R+CPIL+NIEPKQIKVWFQNRRCR+KQRKEASRLQ VNRKLTAMNKLLMEEN+RLQKQVS
Sbjct: 61  RDCPILANIEPKQIKVWFQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVS 120

Query: 121 QLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 180
           QLV EN YMKQQL+      D SC+S VTTPQ+ LRDA+NP+GLL+IAEETL EFLSKAT
Sbjct: 121 QLVHENAYMKQQLQNPSLGNDTSCESNVTTPQNPLRDASNPSGLLTIAEETLTEFLSKAT 180

Query: 181 GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDC 240
           GTAVDWV MPGMKPGPDS GI A+S  C GVAARACGLV+LEPTKI EILKDRPSWFRDC
Sbjct: 181 GTAVDWVPMPGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDC 240

Query: 241 RSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS 300
           RSLEVFTMFPAGN GTIEL+Y Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGS
Sbjct: 241 RSLEVFTMFPAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGS 300

Query: 301 GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV 360
           G GP+ ASA QFVRAEMLPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+V
Sbjct: 301 GGGPSTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV 360

Query: 361 VAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL 410
           VAQ+MT A          ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+
Sbjct: 361 VAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSV 420

Query: 411 MTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHR 470
           M  DG EDVIIA N+ K  +T+++  N+    GG++CAKASMLLQ+VPPA+LVRFLREHR
Sbjct: 421 MGGDGIEDVIIACNAKKVRNTSTS-ANAFVTPGGVICAKASMLLQSVPPAVLVRFLREHR 479

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 530
           SEWAD+N DAYSA+SLK  S + PG+RP RF+GSQIIMPL HT+E+EE+LEV+RLEG +L
Sbjct: 480 SEWADYNFDAYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQAL 539

Query: 531 AQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
             +D  +SRDIHLLQ+C+G+DE ++G+C +LV APIDE+FPDD PL+ SGFR+IPLD KT
Sbjct: 540 THDDGLMSRDIHLLQLCTGIDEKSMGSCFQLVSAPIDELFPDDAPLISSGFRVIPLDMKT 599

Query: 591 PDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
             TP    A RTLDL SSLEVG    P    S    + RSVLTIAFQFP+E +LQD+VAT
Sbjct: 600 DGTP----AGRTLDLASSLEVGSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVAT 655

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELL 710
           MARQYVRS++SSVQRV+MAI PS      G K+  G PEA TLA WICQSY +HLG ELL
Sbjct: 656 MARQYVRSIVSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELL 715

Query: 711 RSDSVGGDSVLKNLWQHSDAILCCSLK 737
           R     G+++LK LW + DAILCCS K
Sbjct: 716 RQADDAGEALLKMLWDYEDAILCCSFK 742


>gi|223975951|gb|ACN32163.1| unknown [Zea mays]
 gi|413957207|gb|AFW89856.1| rolled leaf1 isoform 1 [Zea mays]
 gi|413957208|gb|AFW89857.1| rolled leaf1 isoform 2 [Zea mays]
          Length = 842

 Score = 1079 bits (2791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/734 (70%), Positives = 600/734 (81%), Gaps = 15/734 (2%)

Query: 15  SSSGSINK-HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           S SG  +K   +D+GKYVRYT EQVE LER+Y +CPKPSS RRQQL+RECPILSNIEPKQ
Sbjct: 15  SDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQ 74

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           IKVWFQNRRCR+KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL
Sbjct: 75  IKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQL 134

Query: 134 RTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           +      D SC+S VTTP + +RDA+NP+GLL+IAEET  EFLSKATGTA+DWVQMPGMK
Sbjct: 135 QNTSLANDTSCESNVTTPPNPIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 194

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDSVGI AIS  C GVAARACGLV+LEPTK  EILKDRPSWFRDCRSLEVFT FPAGN
Sbjct: 195 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDCRSLEVFTRFPAGN 254

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+Y Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GPN AS  QFV
Sbjct: 255 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASTQQFV 314

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEMLPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT       
Sbjct: 315 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 374

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV+IA 
Sbjct: 375 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVIAC 434

Query: 424 NSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSA 483
           NSTK +   SN   +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A
Sbjct: 435 NSTKKIRNTSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLA 494

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
           +SLK  + + PG+RP RF+  Q+IMPL HT+E+EE+LEV+RLEG  L  ++A +SRDIHL
Sbjct: 495 SSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHL 554

Query: 544 LQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTL 603
           LQ+C+G+DE +VG+  +LVFAPIDE FPDD PL+ SGFR+IPLD KT    D +++ RTL
Sbjct: 555 LQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDVKT----DGVSSGRTL 610

Query: 604 DLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSV 663
           DL SSL+VG A   A+G+S      RSVLTIAFQFP+E +LQD+VA MARQYVRSVIS+V
Sbjct: 611 DLASSLDVGSAAPQASGESPDDCSLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAV 670

Query: 664 QRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKN 723
           QRV+MAI PS      G ++  G PEA TLA W+CQSY YHLG ELL      G+++LK 
Sbjct: 671 QRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKM 730

Query: 724 LWQHSDAILCCSLK 737
           LW H DA+LCCS K
Sbjct: 731 LWHHPDAVLCCSFK 744


>gi|222613019|gb|EEE51151.1| hypothetical protein OsJ_31913 [Oryza sativa Japonica Group]
          Length = 816

 Score = 1079 bits (2791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/723 (73%), Positives = 604/723 (83%), Gaps = 15/723 (2%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+GKYVRYT EQVEALERVY+ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNRRCR
Sbjct: 1   MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCR 60

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +KQRKEASRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN YMKQQL+      D SC
Sbjct: 61  DKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLGNDTSC 120

Query: 145 DSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAI 204
           +S VTTPQ+ LRDA+NP+GLL+IAEETL EFLSKATGTAVDWV MPGMKPGPDS GI A+
Sbjct: 121 ESNVTTPQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPDSFGIVAV 180

Query: 205 SQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQA 264
           S  C GVAARACGLV+LEPTKI EILKDRPSWFRDCRSLEVFTMFPAGN GTIEL+Y Q 
Sbjct: 181 SHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYMQM 240

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
           YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GP+ ASA QFVRAEMLPSG L+
Sbjct: 241 YAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLPSGYLV 300

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEV 374
           RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT A          ETSGEV
Sbjct: 301 RPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEV 360

Query: 375 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
           VY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDVIIA N+ K  +T+++
Sbjct: 361 VYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNAKKVRNTSTS 420

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYP 494
             N+    GG++CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N DAYSA+SLK  S + P
Sbjct: 421 -ANAFVTPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSASSLKTSSCSLP 479

Query: 495 GMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENA 554
           G+RP RF+GSQIIMPL HT+E+EE+LEV+RLEG +L  +D  +SRDIHLLQ+C+G+DE +
Sbjct: 480 GLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLLQLCTGIDEKS 539

Query: 555 VGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPA 614
           +G+C +LV APIDE+FPDD PL+ SGFR+IPLD KT  TP    A RTLDL SSLEVG  
Sbjct: 540 MGSCFQLVSAPIDELFPDDAPLISSGFRVIPLDMKTDGTP----AGRTLDLASSLEVGST 595

Query: 615 TNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSG 674
             P    S    + RSVLTIAFQFP+E +LQD+VATMARQYVRS++SSVQRV+MAI PS 
Sbjct: 596 AQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVSMAISPSR 655

Query: 675 LSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCC 734
                G K+  G PEA TLA WICQSY +HLG ELLR     G+++LK LW + DAILCC
Sbjct: 656 SGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCC 715

Query: 735 SLK 737
           S K
Sbjct: 716 SFK 718


>gi|162462024|ref|NP_001105533.1| rolled leaf1 [Zea mays]
 gi|40950648|gb|AAR97952.1| rolled leaf1 [Zea mays]
          Length = 840

 Score = 1078 bits (2788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/736 (70%), Positives = 602/736 (81%), Gaps = 18/736 (2%)

Query: 15  SSSGSINK-HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           S SG  +K   +D+GKYVRYT EQVE LER+Y +CPKPSS RRQQL+RECPILSNIEPKQ
Sbjct: 12  SDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQ 71

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           IKVWFQNRRCR+KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL
Sbjct: 72  IKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQL 131

Query: 134 RTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           +      D SC+S VTTP + +RDA+NP+GLL+IAEET  EFLSKATGTA+DWVQMPGMK
Sbjct: 132 QNTSLANDTSCESNVTTPPNPIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 191

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDSVGI AIS  C GVAARACGLV+LEPTK  EILKDRPSWFRDCRSLEVFT FPAGN
Sbjct: 192 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDCRSLEVFTRFPAGN 251

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+Y Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GPN AS  QFV
Sbjct: 252 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASTQQFV 311

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEMLPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT       
Sbjct: 312 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 371

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV+IA 
Sbjct: 372 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVIAC 431

Query: 424 NSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSA 483
           NSTK +   SN   +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A
Sbjct: 432 NSTKKIRNTSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLA 491

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
           +SLK  + + PG+RP RF+  Q+IMPL HT+E+EE+LEV+RLEG  L  ++A +SRDIHL
Sbjct: 492 SSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHL 551

Query: 544 LQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTL 603
           LQ+C+G+DE +VG+  +LVFAPIDE FPDD PL+ SGFR+IPLD KT    D +++ RTL
Sbjct: 552 LQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDVKT----DGVSSGRTL 607

Query: 604 DLTSSLEVGPATNPAAGDSS--SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           DL SSL+VG A   A+GD+S   C   RSVLTIAFQFP+E +LQD+VA MARQYVRSVIS
Sbjct: 608 DLASSLDVGSAAPQASGDASPDDC-SLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVIS 666

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVL 721
           +VQRV+MAI PS      G ++  G PEA TLA W+CQSY YHLG ELL      G+++L
Sbjct: 667 AVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALL 726

Query: 722 KNLWQHSDAILCCSLK 737
           K LW H DA+LCCS K
Sbjct: 727 KMLWHHPDAVLCCSFK 742


>gi|242039345|ref|XP_002467067.1| hypothetical protein SORBIDRAFT_01g019120 [Sorghum bicolor]
 gi|241920921|gb|EER94065.1| hypothetical protein SORBIDRAFT_01g019120 [Sorghum bicolor]
          Length = 838

 Score = 1077 bits (2784), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/725 (71%), Positives = 596/725 (82%), Gaps = 19/725 (2%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D GKYVRYT EQVE LERVY+ECPKPSS RRQQL+RECPILSNIEPKQIKVWFQNRRCR
Sbjct: 23  MDTGKYVRYTPEQVETLERVYAECPKPSSARRQQLLRECPILSNIEPKQIKVWFQNRRCR 82

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN YMKQQL+      DASC
Sbjct: 83  DKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLANDASC 142

Query: 145 DSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAI 204
           DS VT P + LRDA+NP+GLLSIAEETL EFLSKATGTA+DWVQMPGMKPGPDS GI  I
Sbjct: 143 DSNVTAPAN-LRDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMPGMKPGPDSFGIVTI 201

Query: 205 SQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQA 264
           S    GVAARACGLV+LEPTKI EILKDRPSWFRDCRSLEVFTM PAGN GTIEL+Y Q 
Sbjct: 202 SHGGRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMLPAGNGGTIELVYMQM 261

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
           YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG G + A+A QFVRAEMLPSG L+
Sbjct: 262 YAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGDGQSAATAQQFVRAEMLPSGYLV 321

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEV 374
           R C+GGGSI+ IVDHL+L+AWSVPEVLRPLYESS+VVAQ+MT A          ETSGEV
Sbjct: 322 RQCEGGGSIVRIVDHLDLDAWSVPEVLRPLYESSRVVAQKMTTAALRHLRQIAQETSGEV 381

Query: 375 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
           VY +GRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDVIIA NS K + + SN
Sbjct: 382 VYAMGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMAGDGIEDVIIACNS-KKIRSGSN 440

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYP 494
           P  +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N DAYSA++LK    + P
Sbjct: 441 PATAFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSASALKTSPCSLP 500

Query: 495 GMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENA 554
           G+RP RF+GSQIIMPL HT+E+EE+LEV+RLEG +L  ++  +SRDIHLLQ+C+G+DE +
Sbjct: 501 GLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQTLTHDEGLLSRDIHLLQLCTGIDEKS 560

Query: 555 VGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPA 614
           +G+C +LVFAPIDE+FPDD PL+ SGFR+IPLD KT    D L++ RTLDL SSLEVG  
Sbjct: 561 MGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDIKT----DGLSSGRTLDLASSLEVGAT 616

Query: 615 TNPAAGDSS--SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICP 672
           T  A+ D S  +C + RSVLTIAFQFP+E +LQD VA MARQYVRS++S+VQRV+MAI P
Sbjct: 617 TQQASADGSQDAC-NLRSVLTIAFQFPYEIHLQDTVAAMARQYVRSIVSAVQRVSMAISP 675

Query: 673 SGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAIL 732
           S      G K+  G PEA TL  WICQSY YH+G +L+      G+S+L+  W H DA+L
Sbjct: 676 SQSGLNTGQKIISGFPEAATLVRWICQSYRYHMGVDLVSHSDQAGESLLRMFWDHQDAVL 735

Query: 733 CCSLK 737
           CCS K
Sbjct: 736 CCSFK 740


>gi|224056521|ref|XP_002298892.1| predicted protein [Populus trichocarpa]
 gi|60327627|gb|AAX19053.1| class III HD-Zip protein 4 [Populus trichocarpa]
 gi|222846150|gb|EEE83697.1| predicted protein [Populus trichocarpa]
          Length = 844

 Score = 1076 bits (2782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/743 (71%), Positives = 608/743 (81%), Gaps = 29/743 (3%)

Query: 19  SINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 78
           S +KH +D+ KYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPILSNIEPKQIKVWF
Sbjct: 7   SKDKH-MDSSKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 65

Query: 79  QNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPA 138
           QNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS LV ENG+M+QQ++TA A
Sbjct: 66  QNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGFMRQQIQTASA 125

Query: 139 TT-DASCDSVVTT----------PQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWV 187
           TT D SC+SVV +          PQ   RDANNPAGLL+IAEETLAEFLSKATGTAVDWV
Sbjct: 126 TTTDNSCESVVMSGQHQQQQNPTPQQPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWV 185

Query: 188 QMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFT 247
           QM GMKPGPDS+GI A+S++CSGVAARACGLVSLEPTK+AEILKDRPSWFRDCR L++ +
Sbjct: 186 QMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCRCLDILS 245

Query: 248 MFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA 307
           + P G+ GTIEL+Y Q YAPTTLA ARDFWTLRYTTTL++GSLV+CERSL+ S  GP   
Sbjct: 246 VIPTGSGGTIELIYMQTYAPTTLAAARDFWTLRYTTTLEDGSLVICERSLTSSTGGPTGP 305

Query: 308 SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI 367
             + F+RAEMLPSG LIRPC+G GSIIHIVDH++L+ WSVPEVLRPLYESSK++AQ+MT+
Sbjct: 306 PPSSFIRAEMLPSGYLIRPCEGSGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKMTM 365

Query: 368 A----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAE 417
           A          ETSGE+ YG GRQPAVLRTFSQRL RGFNDAVNGF DDGWSL+  DG +
Sbjct: 366 AALRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFTDDGWSLLGSDGGD 425

Query: 418 DVIIAVNST--KSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWAD 475
           DV I +NS+  K L +  N +    F GG+LCAKASMLLQNVPPALLVRFLREHRSEWAD
Sbjct: 426 DVTIVINSSPNKFLGSQYNASMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWAD 485

Query: 476 FNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDA 535
           + VDAYSAA LKA  YA P  RP  F  SQ+I+PL HT+EHEE LEV+RLEGH+ + ED 
Sbjct: 486 YGVDAYSAACLKASPYAVPCARPGGFPSSQVILPLAHTMEHEEFLEVVRLEGHAFSPEDV 545

Query: 536 FVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPD 595
            ++RD++LLQ+CSGVDENAVGAC++LVFAPIDE F DD PLL SGFR+IPLD KT D P 
Sbjct: 546 ALARDMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAPLLSSGFRVIPLDPKT-DAPA 604

Query: 596 TLTAHRTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
           T    RTLDL S+LEVGP  T PA+   ++ ++ RSVLTIAFQF FE++++DNVA MARQ
Sbjct: 605 TT---RTLDLASTLEVGPGGTRPASEADTNSYNLRSVLTIAFQFSFENHMRDNVAAMARQ 661

Query: 655 YVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS 714
           YVR V+ SVQRVAMAI PS LS  +GPK  PGSPEALTLA WIC+SY  H G EL R +S
Sbjct: 662 YVRGVVGSVQRVAMAIAPSRLSSNVGPKTLPGSPEALTLAQWICRSYRIHTGGELFRVES 721

Query: 715 VGGDSVLKNLWQHSDAILCCSLK 737
             GD++LK LW HSDAI+CCSLK
Sbjct: 722 QAGDALLKQLWHHSDAIMCCSLK 744


>gi|63095203|gb|AAY32332.1| HB1 [Phyllostachys praecox]
          Length = 824

 Score = 1076 bits (2782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/732 (72%), Positives = 606/732 (82%), Gaps = 18/732 (2%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           G  +K  +D+GKYVRYT EQVEALER+Y+ECPKPSS RRQQL+RECPIL+NIEPKQIKVW
Sbjct: 1   GGYDKAGIDSGKYVRYTPEQVEALERMYAECPKPSSTRRQQLLRECPILANIEPKQIKVW 60

Query: 78  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP 137
           FQNRRCR+KQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN YMKQQL+   
Sbjct: 61  FQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENAYMKQQLQNPS 120

Query: 138 ATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
              D SC+S VTT Q+ L+DA+NP+GLLSIAEETL EFLSKATGTAVDWVQMPGMKPGPD
Sbjct: 121 LANDTSCESNVTT-QNPLKDASNPSGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPD 179

Query: 198 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTI 257
           SVGI AIS  C GVAARAC LV+LEPTK+ EILKDRPSWF D +SLEVFTMFPAGN GTI
Sbjct: 180 SVGIVAISHGCRGVAARACDLVNLEPTKVVEILKDRPSWFCDRQSLEVFTMFPAGNGGTI 239

Query: 258 ELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEM 317
           EL+YTQ YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GP+ ASA QFVRAEM
Sbjct: 240 ELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQFVRAEM 299

Query: 318 LPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------- 368
           LPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT A         
Sbjct: 300 LPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIA 359

Query: 369 -ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
            ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDVIIA NS K
Sbjct: 360 QETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNS-K 418

Query: 428 SLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLK 487
            +   S   N+    GG++CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N DAYSA +LK
Sbjct: 419 KIRNNSTAANAFGAPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSALALK 478

Query: 488 AGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQIC 547
             S + PG+RPTRF+GSQIIMPL HT+E+EE+LEVIRLEG +L  ++  +SRDIHLLQ+C
Sbjct: 479 TSSCSLPGLRPTRFSGSQIIMPLAHTVENEEILEVIRLEGQALTHDEGLLSRDIHLLQLC 538

Query: 548 SGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTS 607
           +G+DE ++G+C +LVFAPIDE+FPDD PL+ SGFR+IPLD KT   P      RTLDL S
Sbjct: 539 TGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGAP----TGRTLDLAS 594

Query: 608 SLEVGPATNPAAGDSS--SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQR 665
           SLEVG  T  A GD+S   C + RSVLTIAFQFP+E +LQD+VATMARQYVRSV+S+VQR
Sbjct: 595 SLEVGSTTQQATGDASLDDCRNLRSVLTIAFQFPYEIHLQDSVATMARQYVRSVVSAVQR 654

Query: 666 VAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLW 725
           V+MAI P       G K+  G PEA TLA WICQSY +HLG ELLR     G+S+L+ LW
Sbjct: 655 VSMAISPPRSGVNAGQKIFSGFPEAATLARWICQSYQFHLGVELLRQADEAGESLLRMLW 714

Query: 726 QHSDAILCCSLK 737
            + DAILCCS K
Sbjct: 715 DYEDAILCCSFK 726


>gi|242033571|ref|XP_002464180.1| hypothetical protein SORBIDRAFT_01g013710 [Sorghum bicolor]
 gi|241918034|gb|EER91178.1| hypothetical protein SORBIDRAFT_01g013710 [Sorghum bicolor]
          Length = 854

 Score = 1070 bits (2767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/767 (70%), Positives = 620/767 (80%), Gaps = 31/767 (4%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MAMV+    + +  SS G     Q+D GKYVRYT EQVEALERVYSECPKPSSLRRQQLI
Sbjct: 1   MAMVVVGGGKDR--SSPGGGGAPQVDTGKYVRYTPEQVEALERVYSECPKPSSLRRQQLI 58

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS
Sbjct: 59  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 118

Query: 121 QLVCENGYMKQQLRT-APATTDASCDSVVTTPQHSL----------RDANNPAGLLSIAE 169
           +LV ENGYM+QQL   + ATTD SC+SVVT+ QH            RDANNPAGLL+IAE
Sbjct: 119 RLVYENGYMRQQLHNPSAATTDTSCESVVTSGQHHQQQNPAAPRPQRDANNPAGLLAIAE 178

Query: 170 ETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEI 229
           ETLAEFLSKATGTAVDWVQM GMKPGPDS+GI A+S +CSGVAARACGLVSLEPTK+AEI
Sbjct: 179 ETLAEFLSKATGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEI 238

Query: 230 LKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGS 289
           LKDRPSW+RDCR +++  + P GN GTIEL+Y Q YAPTTLA  RDFWTLRYT+ L++GS
Sbjct: 239 LKDRPSWYRDCRCVDILHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGS 298

Query: 290 LVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPE 349
           LV+CERSL+ S  GP+  +   FVRAE+LPSG LIRPC+GGGS+IHIVDH++L+AWSVPE
Sbjct: 299 LVICERSLTQSTGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPE 358

Query: 350 VLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDA 399
           VLRPLYES K++AQ+ TIA          E+SGE+ YG GRQPAVLRTFSQRLSRGFNDA
Sbjct: 359 VLRPLYESPKILAQKTTIAALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDA 418

Query: 400 VNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQN 456
           VNGF DDGWSLM+ DGAEDV IA+NS+ +     +  +S  F    GGILCAKASMLLQN
Sbjct: 419 VNGFPDDGWSLMSSDGAEDVTIAINSSPNKLIGPHVNSSQLFTTIGGGILCAKASMLLQN 478

Query: 457 VPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEH 516
           VPPALLVRFLREHRSEWAD  VDAYSAA+L+A  YA PG+R + F GSQ+I+PL HT+EH
Sbjct: 479 VPPALLVRFLREHRSEWADPGVDAYSAAALRASPYAVPGLRASGFMGSQVILPLAHTLEH 538

Query: 517 EELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPL 576
           EE LEVIRLEGHSL  ++  +SRD++LLQ+CSGVDENA GAC++LVFAPIDE F DD PL
Sbjct: 539 EEFLEVIRLEGHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPL 598

Query: 577 LPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLTIA 635
           LPSGFR+IPLD+KT    D  +  RTLDL S+LEVG   T  A+ D+SS  +TRSVLTIA
Sbjct: 599 LPSGFRVIPLDAKT----DPPSGTRTLDLASTLEVGSGGTTRASSDASSTCNTRSVLTIA 654

Query: 636 FQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAH 695
           FQF +E++L+++VA MARQYVR+V++SVQRVAMAI PS L   L  K +PGSPEA TLA 
Sbjct: 655 FQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQLEMKQTPGSPEAHTLAR 714

Query: 696 WICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
           WI +SY +H GAELLR+D+   D+ LK LWQHSD+I+CCSLK    F
Sbjct: 715 WIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVF 761


>gi|115454289|ref|NP_001050745.1| Os03g0640800 [Oryza sativa Japonica Group]
 gi|75119691|sp|Q6AST1.1|HOX32_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX32; AltName:
           Full=HD-ZIP protein HOX32; AltName: Full=Homeodomain
           transcription factor HOX32; AltName: Full=OsHox32
 gi|50881435|gb|AAT85280.1| homeobox leucine-zipper protein, putative [Oryza sativa Japonica
           Group]
 gi|108710033|gb|ABF97828.1| class III HD-Zip protein 4, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113549216|dbj|BAF12659.1| Os03g0640800 [Oryza sativa Japonica Group]
 gi|215737063|dbj|BAG95992.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 859

 Score = 1069 bits (2765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/757 (70%), Positives = 612/757 (80%), Gaps = 29/757 (3%)

Query: 11  QQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           +Q  SS G     Q+D GKYVRYT EQVEALERVY ECPKPSSLRRQQLIRECPILSNIE
Sbjct: 14  RQDRSSPGGGGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIE 73

Query: 71  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMK 130
           PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS+LV ENGYM+
Sbjct: 74  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMR 133

Query: 131 QQLRT-APATTDASCDSVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKA 179
           QQL   + ATTD SC+SVVT+ QH            RDANNPAGLL+IAEETLAEFLSKA
Sbjct: 134 QQLHNPSVATTDTSCESVVTSGQHHQQQNPAATRPQRDANNPAGLLAIAEETLAEFLSKA 193

Query: 180 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD 239
           TGTAVDWVQM GMKPGPDS+GI A+S +CSGVAARACGLVSLEPTK+AEILKDRPSW+RD
Sbjct: 194 TGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRD 253

Query: 240 CRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG 299
           CR ++V  + P GN GTIEL+Y Q YAPTTLA  RDFW LRYT+ L++GSLV+CERSL+ 
Sbjct: 254 CRCVDVLHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQ 313

Query: 300 SGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 359
           S  GP+  +   FVRAE+LPSG LIRPC+GGGS+IHIVDH++L+AWSVPEVLRPLYES K
Sbjct: 314 STGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPK 373

Query: 360 VVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS 409
           ++AQ+MTIA          E+SGE+ YG GRQPAVLRTFSQRLSRGFNDAVNGF DDGWS
Sbjct: 374 ILAQKMTIAALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWS 433

Query: 410 LMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFL 466
           LM+ DGAEDV IA NS+ +    S+  +S  F    GGILCAKASMLLQNVPPALLVRFL
Sbjct: 434 LMSSDGAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFL 493

Query: 467 REHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLE 526
           REHRSEWAD  VDAYSAA+L+A  YA PG+R   F GSQ+I+PL HT+EHEE LEVIRLE
Sbjct: 494 REHRSEWADPGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLE 553

Query: 527 GHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPL 586
           GHSL  ++  +SRD++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPL
Sbjct: 554 GHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPL 613

Query: 587 DSKTPDTPDTLTAHRTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQ 645
           D KT    D  +A RTLDL S+LEVG   T  A+ D+SS  +TRSVLTIAFQF +E++L+
Sbjct: 614 DGKT----DAPSATRTLDLASTLEVGSGGTTRASSDTSSTCNTRSVLTIAFQFSYENHLR 669

Query: 646 DNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHL 705
           ++VA MARQYVR+V++SVQRVAMAI PS L   +  K  PGSPEA TLA WI +SY +H 
Sbjct: 670 ESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHT 729

Query: 706 GAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
           GA+LLR+DS   DS LK +WQHSD+I+CCSLK    F
Sbjct: 730 GADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKAAPVF 766


>gi|187609448|sp|A2XK30.1|HOX32_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX32; AltName:
           Full=HD-ZIP protein HOX32; AltName: Full=Homeodomain
           transcription factor HOX32; AltName: Full=OsHox32
 gi|125545051|gb|EAY91190.1| hypothetical protein OsI_12798 [Oryza sativa Indica Group]
          Length = 859

 Score = 1069 bits (2764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/757 (70%), Positives = 612/757 (80%), Gaps = 29/757 (3%)

Query: 11  QQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           +Q  SS G     Q+D GKYVRYT EQVEALERVY ECPKPSSLRRQQLIRECPILSNIE
Sbjct: 14  RQDRSSPGGGGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIE 73

Query: 71  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMK 130
           PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS+LV ENGYM+
Sbjct: 74  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMR 133

Query: 131 QQLRT-APATTDASCDSVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKA 179
           QQL   + ATTD SC+SVVT+ QH            RDANNPAGLL+IAEETLAEFLSKA
Sbjct: 134 QQLHNPSVATTDTSCESVVTSGQHHQQQNPAATRPQRDANNPAGLLAIAEETLAEFLSKA 193

Query: 180 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD 239
           TGTAVDWVQM GMKPGPDS+GI A+S +CSGVAARACGLVSLEPTK+AEILKDRPSW+RD
Sbjct: 194 TGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRD 253

Query: 240 CRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG 299
           CR ++V  + P GN GTIEL+Y Q YAPTTLA  RDFW LRYT+ L++GSLV+CERSL+ 
Sbjct: 254 CRCVDVLHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQ 313

Query: 300 SGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 359
           S  GP+  +   FVRAE+LPSG LIRPC+GGGS+IHIVDH++L+AWSVPEVLRPLYES K
Sbjct: 314 STGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPK 373

Query: 360 VVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS 409
           ++AQ+MTIA          E+SGE+ YG GRQPAVLRTFSQRLSRGFNDAVNGF DDGWS
Sbjct: 374 ILAQKMTIAALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWS 433

Query: 410 LMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFL 466
           LM+ DGAEDV IA NS+ +    S+  +S  F    GGILCAKASMLLQNVPPALLVRFL
Sbjct: 434 LMSSDGAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFL 493

Query: 467 REHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLE 526
           REHRSEWAD  VDAYSAA+L+A  YA PG+R   F GSQ+I+PL HT+EHEE LEVIRLE
Sbjct: 494 REHRSEWADPGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLE 553

Query: 527 GHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPL 586
           GHSL  ++  +SRD++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPL
Sbjct: 554 GHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPL 613

Query: 587 DSKTPDTPDTLTAHRTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQ 645
           D KT    D  +A RTLDL S+LEVG   T  A+ D+SS  +TRSVLTIAFQF +E++L+
Sbjct: 614 DGKT----DAPSATRTLDLASTLEVGSGGTTRASSDTSSTCNTRSVLTIAFQFSYENHLR 669

Query: 646 DNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHL 705
           ++VA MARQYVR+V++SVQRVAMAI PS L   +  K  PGSPEA TLA WI +SY +H 
Sbjct: 670 ESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHT 729

Query: 706 GAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
           GA+LLR+DS   DS LK +WQHSD+I+CCSLK    F
Sbjct: 730 GADLLRTDSQSMDSSLKAMWQHSDSIMCCSLKAAPVF 766


>gi|37694044|gb|AAQ98963.1| homeodomain leucine-zipper protein Hox9 [Oryza sativa Japonica
           Group]
          Length = 840

 Score = 1069 bits (2764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/728 (72%), Positives = 601/728 (82%), Gaps = 15/728 (2%)

Query: 20  INKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQ 79
            +K  +D+GKYVRYT EQVEALERVY+ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQ
Sbjct: 20  FDKAGMDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQ 79

Query: 80  NRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPAT 139
           NRRCR+KQRKEASRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN YMKQQL+     
Sbjct: 80  NRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLG 139

Query: 140 TDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSV 199
            D SC+S VTT Q+ LRDA+NP+GLL+IAEETL EFLSKATGTAVDWV MPGMKPGPDS 
Sbjct: 140 NDTSCESNVTTLQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPDSF 199

Query: 200 GIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIEL 259
           GI A+S  C GVAARACGLV+LEPTKI EILKDRPSWFRDCRSLEVFTMFPAGN GTIEL
Sbjct: 200 GIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTIEL 259

Query: 260 LYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLP 319
           +Y Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GP+ ASA QFVRAEML 
Sbjct: 260 VYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLT 319

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------E 369
           SG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT A          E
Sbjct: 320 SGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQE 379

Query: 370 TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSL 429
           TSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDVIIA N+ K  
Sbjct: 380 TSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNARKVR 439

Query: 430 STASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAG 489
           +T S   N+    GG++CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N DAYSA+SLK  
Sbjct: 440 NT-STSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSASSLKTS 498

Query: 490 SYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSG 549
           S + PG+RP RF+GSQIIMPL HT+E+EE+LEV+RLEG +L  +D  +SRDIHLLQ+C+G
Sbjct: 499 SCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLLQLCTG 558

Query: 550 VDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSL 609
           +DE ++G+C +LV APIDE+FPDD  L+ SGFR+IPL+ KT  TP    A RTLDL SSL
Sbjct: 559 IDEKSMGSCFQLVSAPIDELFPDDAQLISSGFRVIPLNMKTDGTP----AGRTLDLASSL 614

Query: 610 EVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMA 669
           EVG    P    S    + RSVLTIAFQFP+E +LQD+VATMARQYVRS++SSVQRV+MA
Sbjct: 615 EVGSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVSMA 674

Query: 670 ICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSD 729
           I PS      G K+  G PEA TLA WICQSY +HLG ELLR     G+++LK LW + D
Sbjct: 675 ISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYED 734

Query: 730 AILCCSLK 737
           AILCCS K
Sbjct: 735 AILCCSFK 742


>gi|326526073|dbj|BAJ93213.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 840

 Score = 1068 bits (2761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/721 (72%), Positives = 599/721 (83%), Gaps = 18/721 (2%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY+ECPKP+S RRQQL+RECPILSNIEP+QIKVWFQNRRCR+K
Sbjct: 30  SGKYVRYTPEQVEALERVYAECPKPTSTRRQQLLRECPILSNIEPRQIKVWFQNRRCRDK 89

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDS 146
           QRKE+SRLQ VNRKL+AMNKLLMEEN+RLQKQVSQLV EN YMKQQL+      D SC+S
Sbjct: 90  QRKESSRLQAVNRKLSAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLANDTSCES 149

Query: 147 VVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQ 206
            VTTP + LRDA+NPAGLL+IAEETL EFLSKATGTAVDWV MPGMKPGPDS GI AIS 
Sbjct: 150 NVTTPPNPLRDASNPAGLLAIAEETLTEFLSKATGTAVDWVPMPGMKPGPDSFGIVAISH 209

Query: 207 SCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYA 266
            C GVAARACGLV+LEPTKI EILKDRPSWFRDCRSLEVFTM PAGN GTIEL+Y Q YA
Sbjct: 210 GCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMLPAGNGGTIELVYMQMYA 269

Query: 267 PTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRP 326
           PTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GP+ ASA QFVRAEMLPSG L+RP
Sbjct: 270 PTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLPSGYLVRP 329

Query: 327 CDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEVVY 376
           CDGGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT A          ETSGEVVY
Sbjct: 330 CDGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEVVY 389

Query: 377 GLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPT 436
            LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDVIIA NS K  S  + P 
Sbjct: 390 ALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMAGDGIEDVIIACNSKKIRSNNTAP- 448

Query: 437 NSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGM 496
           N+    GG++CAKASMLLQNVPPA+LVRFLREHRSEWAD+N DAYSA++LK+ S + PG+
Sbjct: 449 NAFIAPGGVICAKASMLLQNVPPAVLVRFLREHRSEWADYNFDAYSASALKSSSCSLPGL 508

Query: 497 RPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVG 556
           RP RF+GSQIIMPL HT+E+EE+LEV+RLEG +L  ++  +SRDIHLLQ C+G+DE ++G
Sbjct: 509 RPMRFSGSQIIMPLAHTVENEEILEVVRLEGQAL--DEGLLSRDIHLLQFCTGIDEKSMG 566

Query: 557 ACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATN 616
           +C +LVFAPIDE+FPDD PL+ SGFR+IPLD KT   P      RTLDL SSLE G  T 
Sbjct: 567 SCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGAP----TGRTLDLASSLEAGSTTL 622

Query: 617 PAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLS 676
            A+G++  C + RSVLTIAFQFP+E +LQD+VATMARQYVRS++S+VQRV+MAI PS   
Sbjct: 623 QASGNADDC-NLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSAVQRVSMAISPSRSG 681

Query: 677 PTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSL 736
                K+  G PEA TLA WICQSY +HLG EL R     G+S+L+ LW H DAILCCS 
Sbjct: 682 LNAEQKIISGFPEAATLARWICQSYRFHLGVELFRQADEAGESLLRMLWDHEDAILCCSF 741

Query: 737 K 737
           K
Sbjct: 742 K 742


>gi|357120582|ref|XP_003562005.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Brachypodium
           distachyon]
          Length = 861

 Score = 1066 bits (2757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/752 (70%), Positives = 610/752 (81%), Gaps = 28/752 (3%)

Query: 15  SSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQI 74
           SS G     Q+D GKYVRYT EQV+ALERVYSECPKPSSLRRQQLIRECPILSNIEPKQI
Sbjct: 21  SSPGGGGAPQVDTGKYVRYTPEQVDALERVYSECPKPSSLRRQQLIRECPILSNIEPKQI 80

Query: 75  KVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR 134
           KVWFQNRRCREKQRKEASRLQTVNRKL+AMNKLLMEENDRLQKQVS+LV ENGYM+  L 
Sbjct: 81  KVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVYENGYMRTHLS 140

Query: 135 T-APATTDASCDSVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKATGTA 183
             + ATTD SC+SVVT+ QH            RDANNPAGLL+IAEETLAEFLSKATGTA
Sbjct: 141 NPSVATTDTSCESVVTSGQHQQQQNPAVPRPQRDANNPAGLLAIAEETLAEFLSKATGTA 200

Query: 184 VDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSL 243
           VDWVQM GMKPGPDS+GI A+S +CSGVAARACGLVSLEPTK+AEILKDRPSW+RDCR +
Sbjct: 201 VDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCV 260

Query: 244 EVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAG 303
           +V  + P GN GTIEL+Y Q YAPTTLA  RDFW LRYT+ L++GSLV+CERSL+ +  G
Sbjct: 261 DVLQIIPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQATGG 320

Query: 304 PNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQ 363
           P+  +   FVRAE+LPSG LIRPC+GGGS+IHIVDH++L+AWSVPEVLRPLYES K++AQ
Sbjct: 321 PSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQ 380

Query: 364 RMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTC 413
           +MTIA          E+SGE+ YG GRQPAVLRTFSQRLSRGFNDAVNGF DDGWSLM+ 
Sbjct: 381 KMTIAALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFLDDGWSLMSS 440

Query: 414 DGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHR 470
           DGAEDV IA+NS+ +    S+  +S  F    GGILCAKASMLLQNVPPALLVRFLREHR
Sbjct: 441 DGAEDVTIAINSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREHR 500

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 530
           SEWAD  VDAYSAA+L+A  YA PG+R + F GSQ+I+PL HT+EHEE LEVIRLEGHSL
Sbjct: 501 SEWADPGVDAYSAAALRASPYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLEGHSL 560

Query: 531 AQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
             ++  +SRD++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPLD+KT
Sbjct: 561 CHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKT 620

Query: 591 PDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
               D  +A RTLDL S+LEVG     AA D+ S  +TRSVLTIAFQF +E++L+++VA+
Sbjct: 621 ----DAPSATRTLDLASTLEVGSGGTRAASDAPSTSNTRSVLTIAFQFSYENHLRESVAS 676

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELL 710
           MARQYVR+V++SVQRVAMAI PS L   +  K  PGSPEA TLA WI +SY +H GAELL
Sbjct: 677 MARQYVRTVVASVQRVAMAIAPSRLGGQIEMKNPPGSPEAHTLARWIGKSYRFHTGAELL 736

Query: 711 RSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
            +DS   D+ LK LWQHSD+I+CCSLK    F
Sbjct: 737 CTDSQSADASLKALWQHSDSIMCCSLKAAPVF 768


>gi|187471155|sp|A2XBL9.2|HOX10_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX10; AltName:
           Full=HD-ZIP protein HOX10; AltName: Full=Homeodomain
           transcription factor HOX10; AltName: Full=OsHB1;
           AltName: Full=OsHox10
          Length = 839

 Score = 1065 bits (2753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/725 (71%), Positives = 609/725 (84%), Gaps = 18/725 (2%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+GKYVRYT EQVEALERVY++CPKP+S RRQQL+RECPIL+NIEPKQIKVWFQNRRCR
Sbjct: 23  MDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCR 82

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL+  P   D SC
Sbjct: 83  DKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTPLANDTSC 142

Query: 145 DSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAI 204
           +S VTTPQ+ LRDA+NP+GLLSIAEETL EFLSKATGTA+DWVQMPGMKPGPDSVGI AI
Sbjct: 143 ESNVTTPQNPLRDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAI 202

Query: 205 SQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQA 264
           S  C GVAARACGLV+LEPTK+ EILKDRPSWFRDCR+LEVFTM PAGN GT+EL+YTQ 
Sbjct: 203 SHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCRNLEVFTMIPAGNGGTVELVYTQL 262

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
           YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GP+ ASA Q+VRAEMLPSG L+
Sbjct: 263 YAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVRAEMLPSGYLV 322

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEV 374
           RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT A          ETSGEV
Sbjct: 323 RPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEV 382

Query: 375 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
           VY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV+IA NSTK + + SN
Sbjct: 383 VYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDGVEDVVIACNSTKKIRSNSN 442

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYP 494
              +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A++LK  + + P
Sbjct: 443 AGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLASTLKTSACSLP 502

Query: 495 GMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENA 554
           G+RP RF+GSQII+PL HT+E+EE+LEV+RLEG  L  ++A +SRDIHLLQ+C+G+DE +
Sbjct: 503 GLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKS 562

Query: 555 VGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPA 614
           VG+  +LVFAPID+ FPD+ PL+ SGFR+IPLD KT    D  ++ RTLDL SSLEVG A
Sbjct: 563 VGSSFQLVFAPIDD-FPDETPLISSGFRVIPLDMKT----DGASSGRTLDLASSLEVGSA 617

Query: 615 TNPAAGDSSS--CHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICP 672
           T  A+GD+S+  C + RSVLTIAFQFP+E +LQD+VA MARQYVRS++S+VQRV+MAI P
Sbjct: 618 TAQASGDASADDC-NLRSVLTIAFQFPYELHLQDSVAAMARQYVRSIVSAVQRVSMAISP 676

Query: 673 SGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAIL 732
           S      G ++  G PEA TLA W+CQSY YHLG ELL       + +LK LW + DAIL
Sbjct: 677 SQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGDAEQLLKMLWHYQDAIL 736

Query: 733 CCSLK 737
           CCS K
Sbjct: 737 CCSFK 741


>gi|356533043|ref|XP_003535078.1| PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine
           max]
          Length = 846

 Score = 1064 bits (2751), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/740 (70%), Positives = 601/740 (81%), Gaps = 28/740 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
            +Q+D+ KYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 11  NNQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 70

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPA--T 139
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS LV ENGYMKQQ+ TA A  T
Sbjct: 71  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTASAGTT 130

Query: 140 TDASCDSVVTT---------PQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMP 190
           TD SC+SVV +         PQH  RDANNPAGLL+IAEETLAEFLSKATGTAVDWVQM 
Sbjct: 131 TDNSCESVVMSGQNQQQNPTPQHPNRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMI 190

Query: 191 GMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFP 250
           GMKPGPDS+GI A+S++CSGVAARACGLVSLEPTK+AEILKDR SW+RDCR ++V ++ P
Sbjct: 191 GMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRQSWYRDCRCVDVLSIVP 250

Query: 251 AGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAA 310
            GN GTIELLY Q YAPTTLA ARDFWTLRYTT+L++GSLV+CERSL+ S  GP    + 
Sbjct: 251 TGNGGTIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPST 310

Query: 311 QFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-- 368
            FVRAEMLPSG L+RPC+GGGSIIHIVDH++L+ WSVPEVLRPLYESSK +AQ++TIA  
Sbjct: 311 TFVRAEMLPSGFLVRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKFLAQKLTIAAL 370

Query: 369 --------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI 420
                   E+SGE+ Y  GRQPAVLRTFSQRL RGFNDAVNGF DDGWSLM  DG EDV 
Sbjct: 371 QHIRQIAQESSGEIQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMGTDGVEDVT 430

Query: 421 IAVNSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNV 478
           IA+NS+ +    SN   S+  AF GG+LCAKASMLLQNVPPALLVRFLREHRSEWAD+ V
Sbjct: 431 IAINSSPNKFLGSNYNASMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGV 490

Query: 479 DAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVS 538
           DAYSAA LKA  YA P  RP  F  +Q+I+PL HTIEHEE LEV+R+EGH+ + ED  ++
Sbjct: 491 DAYSAACLKASPYAVPCARPGGFPSTQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALA 550

Query: 539 RDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLT 598
           RD++LLQ+CSGVDENA+GAC++LVFAPIDE F DD  LLPSGFR+IPLD K+    D   
Sbjct: 551 RDMYLLQLCSGVDENAIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKS----DGPA 606

Query: 599 AHRTLDLTSSLEVGPATNPAAGDSS-SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVR 657
           A RTLDL S++EVG      AG++  + ++ RSVLTIAFQF FE++ +DNVA MARQYVR
Sbjct: 607 ATRTLDLASTMEVGSGNARPAGEADLNGYNLRSVLTIAFQFTFENHTRDNVAAMARQYVR 666

Query: 658 SVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGG 717
           SV+ SVQRVAMAI PS  +  LGPK   GSPEALTLA WIC+SY  H G EL +++S  G
Sbjct: 667 SVVGSVQRVAMAIAPSRFNTQLGPKSLSGSPEALTLARWICRSYRVHTGTELFKAESTAG 726

Query: 718 DSVLKNLWQHSDAILCCSLK 737
           D++LK LW H DAI+CCS+K
Sbjct: 727 DAILKQLWHHPDAIICCSVK 746


>gi|224113651|ref|XP_002332526.1| predicted protein [Populus trichocarpa]
 gi|60327625|gb|AAX19052.1| class III HD-Zip protein 3 [Populus trichocarpa]
 gi|222832638|gb|EEE71115.1| predicted protein [Populus trichocarpa]
          Length = 843

 Score = 1063 bits (2750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/738 (71%), Positives = 601/738 (81%), Gaps = 29/738 (3%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q+D+ KYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPIL NIEPKQIKVWFQNRRC
Sbjct: 11  QMDSSKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILCNIEPKQIKVWFQNRRC 70

Query: 84  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPAT-TDA 142
           REKQRKE+SRLQTVNRKLTAMNKLLMEENDRLQKQVS LV ENGYM+QQ++TA AT TD 
Sbjct: 71  REKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMRQQIQTASATATDN 130

Query: 143 SCDSVVTT----------PQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           SC+SVV +          PQ   RDANNPAGLL+IAEETLAEFLSKATGTAVDWVQM GM
Sbjct: 131 SCESVVMSGQHQQQQNPTPQQPQRDANNPAGLLTIAEETLAEFLSKATGTAVDWVQMIGM 190

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI A+S++CSGVAARACGLVSLEP K+AEILKDRPSWFRDCR L++ ++ P G
Sbjct: 191 KPGPDSIGIVAVSRNCSGVAARACGLVSLEPIKVAEILKDRPSWFRDCRCLDIMSVIPTG 250

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           + GTIEL+Y Q YAPTTLA ARDFWTLRYTTTL++GSLV+CERSL+ S  GP    ++ F
Sbjct: 251 SGGTIELIYMQTYAPTTLAAARDFWTLRYTTTLEDGSLVICERSLTSSTGGPTGPPSSSF 310

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRA+MLPSG LIRPC+GGGSIIHIVDH++L+ WSVPEVLRPLYESSK++AQ+MT+A    
Sbjct: 311 VRADMLPSGYLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKMTMAALQY 370

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 ETSGE+ YG GRQPAVLRTFSQRL RGFNDAVNGF D GWSL+  DG +DV I 
Sbjct: 371 IRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFTDSGWSLLDGDGGDDVTIV 430

Query: 423 VNS--TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDA 480
           +NS  TK L +  N + S  F GG+LCAKASMLLQNVPPALLVRFLREHRSEWAD+ VD 
Sbjct: 431 INSSPTKFLGSQYNASISPTF-GGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDV 489

Query: 481 YSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRD 540
           YSAA LKA  YA P  RP  F  SQ+I+PL HT+EHEE LEV+RLEGH+ + ED  +++D
Sbjct: 490 YSAACLKASPYAVPCTRPGGFPSSQVILPLAHTVEHEEFLEVVRLEGHAFSPEDVALAQD 549

Query: 541 IHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAH 600
           ++LLQ+CSGVDENA+GAC++LVFAPIDE F DD PLLPSGFR+IPLD KT    D   A 
Sbjct: 550 MYLLQLCSGVDENALGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKT----DAPAAT 605

Query: 601 RTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           RTLDL S+LEVGP    PA+   ++ ++ RSVLTIAFQF FE++ +DNVA MARQYVR V
Sbjct: 606 RTLDLASTLEVGPGGARPASEADTNSYNLRSVLTIAFQFTFENHFRDNVAAMARQYVRGV 665

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMAI PS LS  +GPK  P SPEALTLA WI +SY  H G EL R DS  GD+
Sbjct: 666 VASVQRVAMAISPSRLSSNMGPKSLPVSPEALTLARWIYRSYRIHTGGELFRVDSQAGDA 725

Query: 720 VLKNLWQHSDAILCCSLK 737
           +LK LW HSDAI+CCSLK
Sbjct: 726 LLKRLWHHSDAIMCCSLK 743


>gi|115450213|ref|NP_001048707.1| Os03g0109400 [Oryza sativa Japonica Group]
 gi|75128608|sp|Q6TAQ6.1|HOX10_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX10; AltName:
           Full=HD-ZIP protein HOX10; AltName: Full=Homeodomain
           transcription factor HOX10; AltName: Full=OsHB1;
           AltName: Full=OsHox10
 gi|37813100|gb|AAR04340.1| homeodomain leucine-zipper protein Hox10 [Oryza sativa Japonica
           Group]
 gi|108705779|gb|ABF93574.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|113547178|dbj|BAF10621.1| Os03g0109400 [Oryza sativa Japonica Group]
 gi|215717163|dbj|BAG95526.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 839

 Score = 1063 bits (2748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/725 (71%), Positives = 608/725 (83%), Gaps = 18/725 (2%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+GKYVRYT EQVEALERVY++CPKP+S RRQQL+RECPIL+NIEPKQIKVWFQNRRCR
Sbjct: 23  MDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCR 82

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL+  P   D SC
Sbjct: 83  DKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTPLANDTSC 142

Query: 145 DSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAI 204
           +S VTTPQ+ LRDA+NP+GLLSIAEETL EFLSKATGTA+DWVQMPGMKPGPDSVGI AI
Sbjct: 143 ESNVTTPQNPLRDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAI 202

Query: 205 SQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQA 264
           S  C GVAARACGLV+LEPTK+ EILKDRPSWFRDCR+LEVFTM PAGN GT+EL+YTQ 
Sbjct: 203 SHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCRNLEVFTMIPAGNGGTVELVYTQL 262

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
           YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GP+ ASA Q+VRAEMLPSG L+
Sbjct: 263 YAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVRAEMLPSGYLV 322

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEV 374
           RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT A          ETSGEV
Sbjct: 323 RPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEV 382

Query: 375 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
           VY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV+IA NSTK + + SN
Sbjct: 383 VYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDGVEDVVIACNSTKKIRSNSN 442

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYP 494
              +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A++LK  + +  
Sbjct: 443 AGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLASTLKTSACSLT 502

Query: 495 GMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENA 554
           G+RP RF+GSQII+PL HT+E+EE+LEV+RLEG  L  ++A +SRDIHLLQ+C+G+DE +
Sbjct: 503 GLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKS 562

Query: 555 VGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPA 614
           VG+  +LVFAPID+ FPD+ PL+ SGFR+IPLD KT    D  ++ RTLDL SSLEVG A
Sbjct: 563 VGSSFQLVFAPIDD-FPDETPLISSGFRVIPLDMKT----DGASSGRTLDLASSLEVGSA 617

Query: 615 TNPAAGDSSS--CHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICP 672
           T  A+GD+S+  C + RSVLTIAFQFP+E +LQD+VA MARQYVRS++S+VQRV+MAI P
Sbjct: 618 TAQASGDASADDC-NLRSVLTIAFQFPYELHLQDSVAAMARQYVRSIVSAVQRVSMAISP 676

Query: 673 SGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAIL 732
           S      G ++  G PEA TLA W+CQSY YHLG ELL       + +LK LW + DAIL
Sbjct: 677 SQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGDAEQLLKMLWHYQDAIL 736

Query: 733 CCSLK 737
           CCS K
Sbjct: 737 CCSFK 741


>gi|414871038|tpg|DAA49595.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 835

 Score = 1062 bits (2747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/731 (70%), Positives = 598/731 (81%), Gaps = 22/731 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K  +D GKYVRYT EQVEALERVY+ECPKPSS RRQQL+RECPILSNIE KQIKVWFQNR
Sbjct: 14  KSGMDTGKYVRYTPEQVEALERVYAECPKPSSARRQQLLRECPILSNIEAKQIKVWFQNR 73

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTD 141
           RCR+KQR E+SRLQ+VNRKLTAMNKLLMEEN+RLQKQVSQLV EN YMKQQL+     TD
Sbjct: 74  RCRDKQRNESSRLQSVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLATD 133

Query: 142 ASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGI 201
           ASC+S  TTP + LRDA+NP+GLL+IAEETL EFLSKATGTA+DWVQMPGMKPGPDS GI
Sbjct: 134 ASCESNATTPAN-LRDASNPSGLLAIAEETLTEFLSKATGTAIDWVQMPGMKPGPDSFGI 192

Query: 202 FAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLY 261
             IS    GVAARACGLV+LEPTKI EILKDRPSWFRDCRSLEV+TM PAGN GTIEL+Y
Sbjct: 193 VTISHGGRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVYTMLPAGNGGTIELVY 252

Query: 262 TQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSG 321
            Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG G + A+  QFVRAEMLPSG
Sbjct: 253 MQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGDGQSAATTQQFVRAEMLPSG 312

Query: 322 CLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETS 371
            L+R C+GGGSI+ IVDHL+L+AWSVPEVLRPLYESS+VVAQ+MT            ETS
Sbjct: 313 YLVRQCEGGGSIVRIVDHLDLDAWSVPEVLRPLYESSRVVAQKMTTTALRHLRQIAQETS 372

Query: 372 GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLST 431
           GEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDVIIA NS K + +
Sbjct: 373 GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMCGDGMEDVIIACNS-KKIRS 431

Query: 432 ASNPTNSLAF--LGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAG 489
           +SNP         GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N DAYSA++LK  
Sbjct: 432 SSNPATGFGAPGPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSASALKTS 491

Query: 490 SYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSG 549
             + PG+RP RF+GSQIIMPL HT+E+EE+LEV+RLEG +L  ++  +SRDIHLLQ+C+G
Sbjct: 492 PCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQTLTHDEGLLSRDIHLLQLCTG 551

Query: 550 VDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSL 609
           +DE ++G+C +LVFAPIDE+FPDD PL+ SGFR+IPLD KT   P    + RTLDL SSL
Sbjct: 552 MDEKSMGSCFQLVFAPIDELFPDDAPLVSSGFRVIPLDIKTDGPP----SGRTLDLASSL 607

Query: 610 EVGPATNPAAGDSS-SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAM 668
           EVG  T   AG+ S    + RSVLTIAFQFP+E++LQD VA MARQYVRS++S+VQRV+M
Sbjct: 608 EVGATTQQVAGNGSQDVCNLRSVLTIAFQFPYETHLQDTVAAMARQYVRSIVSAVQRVSM 667

Query: 669 AICP--SGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQ 726
           AI P  SGL+ T G KL  GSPEA TL  WICQSY YHLG +L+      G+S+L+  W 
Sbjct: 668 AISPSHSGLN-TAGQKLISGSPEAATLVRWICQSYRYHLGVDLVSHSDQAGESLLRMFWD 726

Query: 727 HSDAILCCSLK 737
           H DA+LCCS K
Sbjct: 727 HQDAVLCCSFK 737


>gi|89514867|gb|ABD75308.1| class III homeodomain-leucine zipper protein C3HDZ3 [Ginkgo biloba]
          Length = 837

 Score = 1062 bits (2747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/739 (71%), Positives = 601/739 (81%), Gaps = 28/739 (3%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
            K  +D+ KYVRYTAEQVEALER+Y++CPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN
Sbjct: 7   GKPAMDSSKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 66

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-AT 139
           RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGY++QQ++TA  AT
Sbjct: 67  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYLRQQIQTASIAT 126

Query: 140 TDASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           TD SC+SVVT        TPQH  RDA+ PAGLLSIAEETL +FLSKATGTAVDW+QMPG
Sbjct: 127 TDTSCESVVTSGPHQHHLTPQHPPRDAS-PAGLLSIAEETLTQFLSKATGTAVDWIQMPG 185

Query: 192 MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA 251
           MKPGPDS+GI AIS SC+GVA+RACGLV LE +K+AEILKDRPSW RDCR L+V T FP 
Sbjct: 186 MKPGPDSIGIVAISHSCTGVASRACGLVGLESSKVAEILKDRPSWLRDCRCLDVLTAFPT 245

Query: 252 GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQ 311
           GN GTIELLYTQ YAPTTLA ARD WTLRYT+ L++GSLVVCERSL+G+  GPN  S   
Sbjct: 246 GNGGTIELLYTQMYAPTTLASARDIWTLRYTSVLEDGSLVVCERSLTGTQGGPNMPSVQH 305

Query: 312 FVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--- 368
           FVRAEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEV+RPLYESS V+AQ+MTI+   
Sbjct: 306 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVIRPLYESSTVLAQKMTISALR 365

Query: 369 -------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVII 421
                  E SGEVV G GRQPA LR FSQRL RGFN+AVNGF DDGWSL+  DG +DV I
Sbjct: 366 HLRQVAQEVSGEVVLGWGRQPAALRAFSQRLGRGFNEAVNGFTDDGWSLLGNDGMDDVTI 425

Query: 422 AVNSTKSLSTASN--PTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNV 478
           A+NS+ S   AS    ++ LA L GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+
Sbjct: 426 AINSSPSKLLASQLAASDGLAALGGGILCAKASMLLQNVPPALLVRFLREHRSEWADCNI 485

Query: 479 DAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVS 538
           DAYS+A++KA  Y+ P  R   F GSQ+I+PL HT+EHEE LEVI+LEGH L  E+  +S
Sbjct: 486 DAYSSAAMKANPYSIPSSRGGVF-GSQVILPLAHTMEHEEFLEVIKLEGHGLTHEETVLS 544

Query: 539 RDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLT 598
           RD+ LLQ+CSG+DENAVG C++LVFAPID  F DD PLLPSGFR+IPLDS T    D  T
Sbjct: 545 RDMFLLQLCSGIDENAVGCCAQLVFAPIDASFADDAPLLPSGFRVIPLDSGT----DGST 600

Query: 599 AHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
            +RTLDL S+L+VG A    +GD  S  + RSVLTIAFQF +E++L+DNVA MARQYVRS
Sbjct: 601 PNRTLDLASALDVGSAGTRTSGDYGSSTNMRSVLTIAFQFTYETHLRDNVAAMARQYVRS 660

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           V++SVQRVAMA+ PS  S  LGP+  PG+PEALTLA WICQSY +HLG ELLR D    +
Sbjct: 661 VVASVQRVAMALAPSRQSTLLGPRPPPGTPEALTLAGWICQSYRFHLGLELLRGDCEASE 720

Query: 719 SVLKNLWQHSDAILCCSLK 737
           SVLK LW HSDAI+CCS K
Sbjct: 721 SVLKLLWHHSDAIMCCSWK 739


>gi|326505494|dbj|BAJ95418.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 867

 Score = 1062 bits (2746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/738 (71%), Positives = 605/738 (81%), Gaps = 28/738 (3%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q+D GKYVRYT EQV+ALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC
Sbjct: 36  QVDTGKYVRYTPEQVDALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 95

Query: 84  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT-APATTDA 142
           REKQRKEASRLQTVNRKL+AMNKLLMEENDRLQKQVS+LV ENGYM+  L   + ATTD 
Sbjct: 96  REKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVYENGYMRTHLSNPSVATTDT 155

Query: 143 SCDSVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           SC+SVVT+ QH            RDANNPAGLL+IAEETLAEFLSKATGTAVDWVQM GM
Sbjct: 156 SCESVVTSGQHQQQQNAVVPRPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMVGM 215

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI A+S +CSGVAARACGLVSLEPTK+AEILKDRPSW+RDCR ++V  + P G
Sbjct: 216 KPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDVLQIIPTG 275

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIEL+Y Q YAPTTLA  RDFW LRYT+ L++GSLV+CERSL+ +  GP+  +   F
Sbjct: 276 NGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQATGGPSGPNTPNF 335

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAE+LPSG LIRPC+GGGS+IHIVDH++L+AWSVPEVLRPLYES K++AQ+MTIA    
Sbjct: 336 VRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALRH 395

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E+SGE+ YG GRQPAVLRTFSQRLSRGFNDAVNGF DDGWSLM+ DGAEDV IA
Sbjct: 396 IRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFLDDGWSLMSSDGAEDVTIA 455

Query: 423 VNST--KSLSTASNPTNSL-AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           +NS+  K   T  NP+    A  GG+LCAKASMLLQNVPPALLVRFLREHRSEWAD  VD
Sbjct: 456 INSSPNKLAGTHVNPSQMFSAIGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADPGVD 515

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAA+L+A  YA PG+R + F GSQ+I+PL HT+EHEE LEVIRLEGHSL  ++  +SR
Sbjct: 516 AYSAAALRASPYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSR 575

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPLD+KT    D  +A
Sbjct: 576 DMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKT----DAPSA 631

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
            RTLDL S+LEVGP    A  D+SS  +TRSVLTIAFQF +E++L+++VA MARQYVR+V
Sbjct: 632 TRTLDLASTLEVGPGGTRAPSDASSTSNTRSVLTIAFQFSYENHLRESVAAMARQYVRTV 691

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMAI PS     +  K  PGSPEA TLA WI +SY +H GAELL ++S   D+
Sbjct: 692 VASVQRVAMAIAPSRPGGQIEMKNPPGSPEAHTLARWIGRSYRFHTGAELLCTESQSADA 751

Query: 720 VLKNLWQHSDAILCCSLK 737
            LK LWQHSD+I+CCSLK
Sbjct: 752 SLKALWQHSDSIMCCSLK 769


>gi|125542090|gb|EAY88229.1| hypothetical protein OsI_09681 [Oryza sativa Indica Group]
          Length = 857

 Score = 1061 bits (2745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/739 (70%), Positives = 610/739 (82%), Gaps = 28/739 (3%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+GKYVRYT EQVEALERVY++CPKP+S RRQQL+RECPIL+NIEPKQIKVWFQNRRCR
Sbjct: 23  MDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCR 82

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL+  P   D SC
Sbjct: 83  DKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTPLANDTSC 142

Query: 145 DSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAI 204
           +S VTTPQ+ LRDA+NP+GLLSIAEETL EFLSKATGTA+DWVQMPGMKPGPDSVGI AI
Sbjct: 143 ESNVTTPQNPLRDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAI 202

Query: 205 SQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQA 264
           S  C GVAARACGLV+LEPTK+ EILKDRPSWFRDCR+LEVFTM PAGN GT+EL+YTQ 
Sbjct: 203 SHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCRNLEVFTMIPAGNGGTVELVYTQL 262

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
           YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GP+ ASA Q+VRAEMLPSG L+
Sbjct: 263 YAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVRAEMLPSGYLV 322

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEV 374
           RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT A          ETSGEV
Sbjct: 323 RPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEV 382

Query: 375 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
           VY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV+IA NSTK + + SN
Sbjct: 383 VYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDGVEDVVIACNSTKKIRSNSN 442

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYP 494
              +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A++LK  + + P
Sbjct: 443 AGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLASTLKTSACSLP 502

Query: 495 GMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENA 554
           G+RP RF+GSQII+PL HT+E+EE+LEV+RLEG  L  ++A +SRDIHLLQ+C+G+DE +
Sbjct: 503 GLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKS 562

Query: 555 VGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPD--------------TPDTLTAH 600
           VG+  +LVFAPID+ FPD+ PL+ SGFR+IPLD KT +                D  ++ 
Sbjct: 563 VGSSFQLVFAPIDD-FPDETPLISSGFRVIPLDMKTLELIEAFGFKYSLGKIKQDGASSG 621

Query: 601 RTLDLTSSLEVGPATNPAAGDSSS--CHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
           RTLDL SSLEVG AT  A+GD+S+  C + RSVLTIAFQFP+E +LQD+VA MARQYVRS
Sbjct: 622 RTLDLASSLEVGSATAQASGDASADDC-NLRSVLTIAFQFPYELHLQDSVAAMARQYVRS 680

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           ++S+VQRV+MAI PS      G ++  G PEA TLA W+CQSY YHLG ELL       +
Sbjct: 681 IVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGDAE 740

Query: 719 SVLKNLWQHSDAILCCSLK 737
            +LK LW + DAILCCS K
Sbjct: 741 QLLKMLWHYQDAILCCSFK 759


>gi|356555875|ref|XP_003546255.1| PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine
           max]
          Length = 846

 Score = 1061 bits (2743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/740 (70%), Positives = 602/740 (81%), Gaps = 28/740 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
            +Q+D+ KYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 11  NNQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 70

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPA--T 139
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS LV ENGYMKQQ+ TA A  T
Sbjct: 71  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTASAGTT 130

Query: 140 TDASCDSVVTT---------PQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMP 190
           TD SC+SVV +         PQH  RDANNPAGLL+IAEETLAEFLSKATGTAVDWVQM 
Sbjct: 131 TDNSCESVVMSGQNQQQNPTPQHPNRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMI 190

Query: 191 GMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFP 250
           GMKPGPDS+GI A+S++CSGVAARACGLVSLEPTK+AEILKDR SW+RDCR ++V ++ P
Sbjct: 191 GMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRQSWYRDCRCVDVLSIVP 250

Query: 251 AGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAA 310
            GN GTIEL+Y Q YAPTTLA ARDFWTLRYTT+L++GSLV+CERSL+ S  GP    + 
Sbjct: 251 TGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPAGPPST 310

Query: 311 QFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-- 368
            FVRAEMLPSG LIRPC+GGGSIIHIVDH++L+ WSVPEVLRPLYESSK++AQ++TIA  
Sbjct: 311 TFVRAEMLPSGFLIRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQKLTIAAL 370

Query: 369 --------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI 420
                   E+SGE+ YG GRQPAVLRTFSQRL RGFNDAVNGF DDGWSLM  DG EDV 
Sbjct: 371 QHIRQIALESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMGTDGVEDVT 430

Query: 421 IAVNSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNV 478
           IA+NS+ +    SN   S+  AF GG+LCAKASMLLQNVPPALLVRFLREHRSEWAD+ V
Sbjct: 431 IAINSSPNKFLGSNYNASMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGV 490

Query: 479 DAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVS 538
           DAYSAA LKA  YA P  RP  F  +Q+I+PL HTIEHEE LEV+R+EGH+ + ED  ++
Sbjct: 491 DAYSAACLKASPYAVPCARPGGFPSTQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVAMA 550

Query: 539 RDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLT 598
           RD++LLQ+CSGVDE+AVGAC++LVFAPIDE F DD  LLPSGFR+IPLD K+    D   
Sbjct: 551 RDMYLLQLCSGVDESAVGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKS----DGPA 606

Query: 599 AHRTLDLTSSLEVGPATNPAAGDSS-SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVR 657
             RTLDL S++EVG      AG++  + ++ RSVLTIAFQF FE++ +DNVA MARQYVR
Sbjct: 607 PTRTLDLASTMEVGSGNARPAGEADLNGYNLRSVLTIAFQFTFENHTRDNVAAMARQYVR 666

Query: 658 SVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGG 717
           SV+ SVQRVAMAI PS L+  L PK  PGSPEALTLA WI +SY  H G EL +++S  G
Sbjct: 667 SVVGSVQRVAMAIAPSRLNTQLAPKSLPGSPEALTLARWIFRSYRMHTGTELFKAESTAG 726

Query: 718 DSVLKNLWQHSDAILCCSLK 737
           D++LK LW H DAI+CCS+K
Sbjct: 727 DAILKQLWHHPDAIMCCSVK 746


>gi|24431605|gb|AAN61485.1| Putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|125584645|gb|EAZ25309.1| hypothetical protein OsJ_09120 [Oryza sativa Japonica Group]
          Length = 857

 Score = 1058 bits (2737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/739 (70%), Positives = 609/739 (82%), Gaps = 28/739 (3%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+GKYVRYT EQVEALERVY++CPKP+S RRQQL+RECPIL+NIEPKQIKVWFQNRRCR
Sbjct: 23  MDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCR 82

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL+  P   D SC
Sbjct: 83  DKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTPLANDTSC 142

Query: 145 DSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAI 204
           +S VTTPQ+ LRDA+NP+GLLSIAEETL EFLSKATGTA+DWVQMPGMKPGPDSVGI AI
Sbjct: 143 ESNVTTPQNPLRDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAI 202

Query: 205 SQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQA 264
           S  C GVAARACGLV+LEPTK+ EILKDRPSWFRDCR+LEVFTM PAGN GT+EL+YTQ 
Sbjct: 203 SHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCRNLEVFTMIPAGNGGTVELVYTQL 262

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
           YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GP+ ASA Q+VRAEMLPSG L+
Sbjct: 263 YAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVRAEMLPSGYLV 322

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEV 374
           RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT A          ETSGEV
Sbjct: 323 RPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEV 382

Query: 375 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
           VY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV+IA NSTK + + SN
Sbjct: 383 VYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDGVEDVVIACNSTKKIRSNSN 442

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYP 494
              +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A++LK  + +  
Sbjct: 443 AGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLASTLKTSACSLT 502

Query: 495 GMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENA 554
           G+RP RF+GSQII+PL HT+E+EE+LEV+RLEG  L  ++A +SRDIHLLQ+C+G+DE +
Sbjct: 503 GLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKS 562

Query: 555 VGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPD--------------TPDTLTAH 600
           VG+  +LVFAPID+ FPD+ PL+ SGFR+IPLD KT +                D  ++ 
Sbjct: 563 VGSSFQLVFAPIDD-FPDETPLISSGFRVIPLDMKTLELIEAFGFKYSLGKIKQDGASSG 621

Query: 601 RTLDLTSSLEVGPATNPAAGDSSS--CHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
           RTLDL SSLEVG AT  A+GD+S+  C + RSVLTIAFQFP+E +LQD+VA MARQYVRS
Sbjct: 622 RTLDLASSLEVGSATAQASGDASADDC-NLRSVLTIAFQFPYELHLQDSVAAMARQYVRS 680

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           ++S+VQRV+MAI PS      G ++  G PEA TLA W+CQSY YHLG ELL       +
Sbjct: 681 IVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGDAE 740

Query: 719 SVLKNLWQHSDAILCCSLK 737
            +LK LW + DAILCCS K
Sbjct: 741 QLLKMLWHYQDAILCCSFK 759


>gi|357146669|ref|XP_003574071.1| PREDICTED: homeobox-leucine zipper protein HOX9-like [Brachypodium
           distachyon]
          Length = 841

 Score = 1058 bits (2736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 523/724 (72%), Positives = 599/724 (82%), Gaps = 18/724 (2%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+GKYVRYT EQVEALERVY+ECPKP+S RRQQL+RECPILSNIE +QIKVWFQNRRCR
Sbjct: 27  MDSGKYVRYTPEQVEALERVYAECPKPTSTRRQQLLRECPILSNIEARQIKVWFQNRRCR 86

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +KQRKE+SRLQ VNRKL+AMNKLLMEEN+RLQKQVSQLV EN YMKQQL+      D SC
Sbjct: 87  DKQRKESSRLQAVNRKLSAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLANDTSC 146

Query: 145 DSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAI 204
           +S VTTPQ+  RDA+NPAGLL+IAEETL EFLSKATGTAVDWV MPGMKPGPDS GI AI
Sbjct: 147 ESNVTTPQNPPRDASNPAGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPDSFGIVAI 206

Query: 205 SQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQA 264
           S  C GVAARACGLV+LEPTKI EILKDRPSWFRDCRSLEVFT  PAGN GTIEL+Y Q 
Sbjct: 207 SHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTQLPAGNGGTIELVYMQM 266

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
           YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GP+ ASA QFVRAEMLPSG L+
Sbjct: 267 YAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLPSGYLV 326

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEV 374
           RPCDGGGSI+H+VDHL+LEAWSVPEVLRPLYESS+VVAQ+MT A          ETSGEV
Sbjct: 327 RPCDGGGSIVHMVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEV 386

Query: 375 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
           VY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDVIIA NS K  S  + 
Sbjct: 387 VYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNSKKIRSNTAA 446

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYP 494
           P+ +    GG++CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N DAYSA++LK  S + P
Sbjct: 447 PS-AFESPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSASALKTSSCSLP 505

Query: 495 GMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENA 554
           G+RP RF+GSQIIMPL HT+E+EE+LEV+RLEG +L  ++  +SRDIHLLQ C+G+DE +
Sbjct: 506 GLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQAL--DEGLLSRDIHLLQFCTGIDEKS 563

Query: 555 VGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPA 614
           +G+C +LVFAPIDE+FPDD PL+ SGFR+IPLD KT  TP      RTLDL SSLEVG  
Sbjct: 564 MGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGTP----TGRTLDLASSLEVGST 619

Query: 615 TNPAAGDSS-SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPS 673
           T  A G++S    + RSVLTIAFQFP+E +LQD VATMARQYVRS++S+VQRV+MAI PS
Sbjct: 620 TLQAPGNTSLDDSNLRSVLTIAFQFPYEMHLQDTVATMARQYVRSIVSAVQRVSMAISPS 679

Query: 674 GLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILC 733
                   K+  G PEA TLA WICQSY +HLG EL+R     G+S+L+ LW + DAILC
Sbjct: 680 RSGLNAEQKIISGFPEAATLARWICQSYQFHLGVELVRQADEAGESLLRMLWDYEDAILC 739

Query: 734 CSLK 737
           CS K
Sbjct: 740 CSFK 743


>gi|45479746|gb|AAS66760.1| PHAVOLUTA-like HD-ZIPIII protein [Nicotiana sylvestris]
          Length = 843

 Score = 1049 bits (2713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/742 (70%), Positives = 598/742 (80%), Gaps = 28/742 (3%)

Query: 21  NKHQ-LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQ 79
           NK+Q +DN KYVRYT EQVEALERVY+ECPKP+SLRRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 7   NKNQIMDNSKYVRYTPEQVEALERVYAECPKPTSLRRQQLIRECPILSNIEPKQIKVWFQ 66

Query: 80  NRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPAT 139
           NRRCREKQRKEASRL TVNRKL+AMNKLLMEENDRLQKQVSQLV ENGYMKQQ+ T  +T
Sbjct: 67  NRRCREKQRKEASRLTTVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYMKQQINTVSST 126

Query: 140 TDAS-CDSVVT---------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
           T  + C+SVV          TPQH  RDANNPAGLL+IAEETLAEFL KATGTAVDWVQM
Sbjct: 127 TTDTSCESVVVNGQQQRKNPTPQHPERDANNPAGLLAIAEETLAEFLGKATGTAVDWVQM 186

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
            GMKPGPDS+GI A+S++CSGVAARACGLVSLEPTK+AEILKDRPSW+RDCR L + ++ 
Sbjct: 187 IGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCLNILSVI 246

Query: 250 PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA 309
           P GN GTIEL+Y Q YAPTTLA ARDFWTLRYTT+L++GSLV+CERSL+ +  GP    A
Sbjct: 247 PTGNGGTIELIYLQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTTATGGPTGPPA 306

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA- 368
             FVRAEMLPSG LIRPC+GGGS+IHIVDH++L+AWSVPEVLRPLYESSK++AQ+ T+A 
Sbjct: 307 TSFVRAEMLPSGYLIRPCEGGGSMIHIVDHIDLDAWSVPEVLRPLYESSKILAQKTTVAA 366

Query: 369 ---------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                    ETSGE+ Y  GRQPAVLR  SQRL RGFNDAVNGF DDGW++M  DG EDV
Sbjct: 367 LRHIRQIAQETSGEIQYTGGRQPAVLRALSQRLCRGFNDAVNGFVDDGWTVMDSDGVEDV 426

Query: 420 IIAVN--STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
            +A+N  STK L +  N  + L   GG+LCA+ASMLLQNVPPALLVRFLREHRSEWAD+ 
Sbjct: 427 TVAINSSSTKFLGSQYNTLSILPTFGGVLCARASMLLQNVPPALLVRFLREHRSEWADYG 486

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
           VDAYSAASLKA  YA P  RP  F  SQ+I+PL  T+EHEE LEV+RLEG + + ED  +
Sbjct: 487 VDAYSAASLKASPYAVPCARPGGFPSSQVILPLAQTVEHEEFLEVVRLEGPAFSPEDIAL 546

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTL 597
           SRD++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPL+ K+    D  
Sbjct: 547 SRDMYLLQLCSGVDENASGACAQLVFAPIDESFGDDAPLLPSGFRVIPLEPKS----DGP 602

Query: 598 TAHRTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYV 656
            A RTLDL S+LE G   T PA    +S ++ RSVLTIAFQF FES+ +DNVA MARQYV
Sbjct: 603 AATRTLDLASTLEAGTGGTRPAGEIEASNYNHRSVLTIAFQFTFESHYRDNVAAMARQYV 662

Query: 657 RSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVG 716
           RS++ SVQRVAMAI PS LS  L PK  PGSPEA+TLA WI +SY  H G +LL+ DS  
Sbjct: 663 RSIVGSVQRVAMAIAPSRLSSQLTPKPFPGSPEAVTLARWISRSYRVHTGGDLLQVDSQD 722

Query: 717 GDSVLKNLWQHSDAILCCSLKV 738
           GD+VLK LW HSDAI+CCS+K+
Sbjct: 723 GDAVLKQLWHHSDAIMCCSVKM 744


>gi|89514865|gb|ABD75307.1| class III homeodomain-leucine zipper protein C3HDZ2 [Ginkgo biloba]
          Length = 843

 Score = 1048 bits (2710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/747 (69%), Positives = 599/747 (80%), Gaps = 30/747 (4%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           ++G   K  +D GKYVRYTAEQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIK
Sbjct: 4   TAGKDGKAGMDPGKYVRYTAEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIK 63

Query: 76  VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT 135
           VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +QQL+ 
Sbjct: 64  VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQLQN 123

Query: 136 AP-ATTDASCDSVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKATGTAV 184
           A  ATTD SC+SVVT+ QH            RDA+ PAGLLSIAEETL EFLSKATGTAV
Sbjct: 124 ASIATTDTSCESVVTSGQHQQQNHLTARHPPRDAS-PAGLLSIAEETLTEFLSKATGTAV 182

Query: 185 DWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLE 244
           +W+QMPGMKPGPDS+GI AIS  C+GVAARACGLV +EPTK+AEILKDRPSWFRDCR ++
Sbjct: 183 EWIQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGIEPTKVAEILKDRPSWFRDCRCVD 242

Query: 245 VFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGP 304
           V T F  GN GT+ELLY Q YAPTTLA ARDFWTLRYT+ L++GSLVVCERSLSG+  GP
Sbjct: 243 VLTAFSTGNGGTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQGGP 302

Query: 305 NPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQR 364
           +      FVRAEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+
Sbjct: 303 SMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 362

Query: 365 MTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCD 414
           MT+A          E S +VV G GRQPA LRTFSQRL +GFN+AVNGF DDGWSLM  D
Sbjct: 363 MTMAALRHLRQIAQEVSCDVVLGWGRQPAALRTFSQRLGKGFNEAVNGFTDDGWSLMGND 422

Query: 415 GAEDVIIAVNSTKSLSTASNPTNSLAF---LGGILCAKASMLLQNVPPALLVRFLREHRS 471
           G +DV I +NS+ +    S   +S  F    GGILCAKASMLLQNVPPALLVRFLREHRS
Sbjct: 423 GTDDVTILINSSPNKILGSQLASSEGFPALGGGILCAKASMLLQNVPPALLVRFLREHRS 482

Query: 472 EWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLA 531
           EWAD N+DAYSAA+LKA   + P  R   F G Q+I+PL HT+EHEE LEVI+LEG+ L 
Sbjct: 483 EWADSNIDAYSAAALKASPCSVPSSRIGGFGGGQVILPLAHTVEHEEFLEVIKLEGNGLT 542

Query: 532 QEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTP 591
           QE+A +SR++ LLQ+CSGVDENAVGAC+ELVFAPID  F D+ PLLPSGFR+IPLDS   
Sbjct: 543 QEEALLSREMFLLQLCSGVDENAVGACAELVFAPIDASFADNAPLLPSGFRVIPLDSGV- 601

Query: 592 DTPDTLTAHRTLDLTSSLEVGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
              D  + +RTLDL S+LE+GPA    +GD   +  + RSVLTIAFQF +E++L++NVA+
Sbjct: 602 ---DGSSPNRTLDLASALEIGPAGTRVSGDYGGNSGNLRSVLTIAFQFTYENHLRENVAS 658

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELL 710
           MARQYVRSV++SVQRVAMA+ PS LS  LGP+  PG+PEALTLA WIC SY +HLG ELL
Sbjct: 659 MARQYVRSVVASVQRVAMALAPSRLSSHLGPRPPPGTPEALTLARWICHSYRFHLGVELL 718

Query: 711 RSDSVGGDSVLKNLWQHSDAILCCSLK 737
           R++    +SVLK LW HSDAI+CCSLK
Sbjct: 719 RANCEANESVLKMLWHHSDAIICCSLK 745


>gi|413957206|gb|AFW89855.1| rolled leaf1 [Zea mays]
          Length = 713

 Score = 1038 bits (2684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/702 (71%), Positives = 578/702 (82%), Gaps = 15/702 (2%)

Query: 15  SSSGSINK-HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           S SG  +K   +D+GKYVRYT EQVE LER+Y +CPKPSS RRQQL+RECPILSNIEPKQ
Sbjct: 15  SDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQ 74

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           IKVWFQNRRCR+KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL
Sbjct: 75  IKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQL 134

Query: 134 RTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           +      D SC+S VTTP + +RDA+NP+GLL+IAEET  EFLSKATGTA+DWVQMPGMK
Sbjct: 135 QNTSLANDTSCESNVTTPPNPIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 194

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDSVGI AIS  C GVAARACGLV+LEPTK  EILKDRPSWFRDCRSLEVFT FPAGN
Sbjct: 195 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDCRSLEVFTRFPAGN 254

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+Y Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GPN AS  QFV
Sbjct: 255 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASTQQFV 314

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEMLPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT       
Sbjct: 315 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 374

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV+IA 
Sbjct: 375 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVIAC 434

Query: 424 NSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSA 483
           NSTK +   SN   +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A
Sbjct: 435 NSTKKIRNTSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLA 494

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
           +SLK  + + PG+RP RF+  Q+IMPL HT+E+EE+LEV+RLEG  L  ++A +SRDIHL
Sbjct: 495 SSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHL 554

Query: 544 LQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTL 603
           LQ+C+G+DE +VG+  +LVFAPIDE FPDD PL+ SGFR+IPLD KT    D +++ RTL
Sbjct: 555 LQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDVKT----DGVSSGRTL 610

Query: 604 DLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSV 663
           DL SSL+VG A   A+G+S      RSVLTIAFQFP+E +LQD+VA MARQYVRSVIS+V
Sbjct: 611 DLASSLDVGSAAPQASGESPDDCSLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAV 670

Query: 664 QRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHL 705
           QRV+MAI PS      G ++  G PEA TLA W+CQSY Y +
Sbjct: 671 QRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYQYGI 712


>gi|356528394|ref|XP_003532788.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Glycine max]
          Length = 849

 Score = 1034 bits (2673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/751 (68%), Positives = 600/751 (79%), Gaps = 32/751 (4%)

Query: 12  QRESSSGSINKHQL-DNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           QR+S+S   NK QL D GKYVRYT EQVEALERVY ECPKPSS RRQQ+IRECP+L+NIE
Sbjct: 6   QRDSAS---NKQQLMDCGKYVRYTPEQVEALERVYIECPKPSSSRRQQIIRECPLLANIE 62

Query: 71  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMK 130
            KQIKVWFQNRRCREKQRKEASRLQTVNRKL+AMNKLLMEENDRLQKQVSQLV +NG+MK
Sbjct: 63  TKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVYDNGFMK 122

Query: 131 QQLRTAPATT--DASCDSVVTTPQ---------HSLRDANNPAGLLSIAEETLAEFLSKA 179
           QQ+ TA ATT  D SC+SVV + Q         H   DANNPAGLL+IA+ETLA FLSKA
Sbjct: 123 QQIHTASATTTTDNSCESVVVSGQRQHQNPKIQHPQWDANNPAGLLAIAQETLAAFLSKA 182

Query: 180 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD 239
           TGTAV+WVQM GMKPGPDS+GI A+S++CSGVAARACGLVSLEPTK+AEILKDRPSW+RD
Sbjct: 183 TGTAVNWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYRD 242

Query: 240 CRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG 299
           CR L V ++ P GN GTIEL+Y Q YAPTTLA ARDFWTLRYTT+L++GSLV+CERSL+ 
Sbjct: 243 CRCLNVLSVIPTGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTS 302

Query: 300 SGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 359
           S  GP   +A+ FVRAEMLPSG LIR C+GGGSI+HIVDH++L+ WSVPEVLRPLYES K
Sbjct: 303 STGGPTGPAASNFVRAEMLPSGYLIRSCEGGGSIVHIVDHVDLDVWSVPEVLRPLYESPK 362

Query: 360 VVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS 409
            +AQ++T A          E+SGEV YG GRQPAVLRTFSQRL +GFNDAVNGF DDGWS
Sbjct: 363 FLAQKLTTAALRNVRQIAQESSGEVQYGGGRQPAVLRTFSQRLCKGFNDAVNGFVDDGWS 422

Query: 410 LMTCDGAEDVIIAVNST--KSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR 467
           LM  DG EDV I +NS+  K  S+  N +   AF GG+LCAKASMLLQNVPPALLVRFLR
Sbjct: 423 LMGNDGVEDVTIGINSSPNKFFSSHYNTSMLPAFGGGVLCAKASMLLQNVPPALLVRFLR 482

Query: 468 EHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEG 527
           EHRSEWA++ VDAYS+A LKA  YA P  RP+ F  S +I+PL HTIEHEE LEV+R+EG
Sbjct: 483 EHRSEWANYGVDAYSSACLKASPYAVPCARPSGFPSSHVIIPLAHTIEHEEFLEVVRIEG 542

Query: 528 HSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLD 587
           ++   +D  ++ D++L+Q+CSG+DENA+GAC++LVFAPIDE F DD  LLPSGFRIIPLD
Sbjct: 543 NAFPPDDVALACDMYLMQLCSGIDENAIGACAQLVFAPIDESFADDALLLPSGFRIIPLD 602

Query: 588 SKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSS-SCHHTRSVLTIAFQFPFESNLQD 646
            KT    D   + RTLDL S+LE G     +AG+S  + ++ RSVLTIAFQF FE++L+D
Sbjct: 603 PKT----DGPASTRTLDLASTLETGSGNARSAGESDLNNYNLRSVLTIAFQFTFENHLRD 658

Query: 647 NVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLG 706
           NVA MARQYVR+V+ SVQRVAMAI PS +S  LGPK  PG PEALTLA WIC+SYS H  
Sbjct: 659 NVAVMARQYVRNVVRSVQRVAMAIAPSRISTQLGPKSLPGPPEALTLARWICKSYSLHTC 718

Query: 707 AELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
            EL   +S  GD++LK LW H DAILCCS+K
Sbjct: 719 TELFSVESTSGDAILKQLWHHPDAILCCSVK 749


>gi|413957205|gb|AFW89854.1| rolled leaf1 [Zea mays]
          Length = 709

 Score = 1034 bits (2673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/698 (71%), Positives = 576/698 (82%), Gaps = 15/698 (2%)

Query: 15  SSSGSINK-HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           S SG  +K   +D+GKYVRYT EQVE LER+Y +CPKPSS RRQQL+RECPILSNIEPKQ
Sbjct: 15  SDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQ 74

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           IKVWFQNRRCR+KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL
Sbjct: 75  IKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQL 134

Query: 134 RTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           +      D SC+S VTTP + +RDA+NP+GLL+IAEET  EFLSKATGTA+DWVQMPGMK
Sbjct: 135 QNTSLANDTSCESNVTTPPNPIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 194

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDSVGI AIS  C GVAARACGLV+LEPTK  EILKDRPSWFRDCRSLEVFT FPAGN
Sbjct: 195 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDCRSLEVFTRFPAGN 254

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+Y Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GPN AS  QFV
Sbjct: 255 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASTQQFV 314

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEMLPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT       
Sbjct: 315 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 374

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV+IA 
Sbjct: 375 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVIAC 434

Query: 424 NSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSA 483
           NSTK +   SN   +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A
Sbjct: 435 NSTKKIRNTSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLA 494

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
           +SLK  + + PG+RP RF+  Q+IMPL HT+E+EE+LEV+RLEG  L  ++A +SRDIHL
Sbjct: 495 SSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHL 554

Query: 544 LQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTL 603
           LQ+C+G+DE +VG+  +LVFAPIDE FPDD PL+ SGFR+IPLD KT    D +++ RTL
Sbjct: 555 LQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDVKT----DGVSSGRTL 610

Query: 604 DLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSV 663
           DL SSL+VG A   A+G+S      RSVLTIAFQFP+E +LQD+VA MARQYVRSVIS+V
Sbjct: 611 DLASSLDVGSAAPQASGESPDDCSLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAV 670

Query: 664 QRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSY 701
           QRV+MAI PS      G ++  G PEA TLA W+CQSY
Sbjct: 671 QRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSY 708


>gi|115489546|ref|NP_001067260.1| Os12g0612700 [Oryza sativa Japonica Group]
 gi|122248513|sp|Q2QM96.1|HOX33_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX33; AltName:
           Full=HD-ZIP protein HOX33; AltName: Full=Homeodomain
           transcription factor HOX33; AltName: Full=OsHox33
 gi|187609460|sp|A2ZMN9.2|HOX33_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX33; AltName:
           Full=HD-ZIP protein HOX33; AltName: Full=Homeodomain
           transcription factor HOX33; AltName: Full=OsHox33
 gi|77556590|gb|ABA99386.1| class III HD-Zip protein 4, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113649767|dbj|BAF30279.1| Os12g0612700 [Oryza sativa Japonica Group]
 gi|218187239|gb|EEC69666.1| hypothetical protein OsI_39093 [Oryza sativa Indica Group]
 gi|222617467|gb|EEE53599.1| hypothetical protein OsJ_36852 [Oryza sativa Japonica Group]
          Length = 855

 Score = 1033 bits (2670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/761 (67%), Positives = 605/761 (79%), Gaps = 28/761 (3%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MA      + ++  SSS +    Q+D GKYVRYT EQVEALERVY+ECPKPSSLRRQQLI
Sbjct: 1   MAAAAVGGRGERLSSSSPTAAAPQVDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLI 60

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKL AMNKLLMEENDRLQKQVS
Sbjct: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVS 120

Query: 121 QLVCENGYMKQQLRT-APATTDASCDSVVTTPQHSL----------RDANNPAGLLSIAE 169
           +LV ENGYM+ QL   + ATTD SC+SVVT+ QH            RDANNPAGLL+IAE
Sbjct: 121 RLVYENGYMRTQLHNPSAATTDTSCESVVTSGQHHQQQNPAVLHPQRDANNPAGLLAIAE 180

Query: 170 ETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEI 229
           ETLAEF+SKATGTAV+WVQM GMKPGPDS+GI A+S +CSGVAARACGLVSLEPTK+AEI
Sbjct: 181 ETLAEFMSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEI 240

Query: 230 LKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGS 289
           LKDRPSW+RDCR +++  + P GN GTIEL+Y Q YAPTTLA  RDFWTLRYT+ L++GS
Sbjct: 241 LKDRPSWYRDCRCVDIIHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGS 300

Query: 290 LVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPE 349
           LV+CERSL+ S  GP+  +   F+RAE+LPSG LIRPC+GGGS+I+IVDH++L+AWSVPE
Sbjct: 301 LVICERSLTQSTGGPSGPNTPNFIRAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPE 360

Query: 350 VLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDA 399
           VLRPLYES K++AQ+MTIA          E+SGE+ YG GRQPAV RTFSQRLSRGFNDA
Sbjct: 361 VLRPLYESPKILAQKMTIAALRHIRQIAHESSGEIPYGAGRQPAVFRTFSQRLSRGFNDA 420

Query: 400 VNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQN 456
           V+GF DDGWSL++ DG+ED+ I+VNS+ +    S+ + +  F    GGILCAKASMLLQN
Sbjct: 421 VSGFPDDGWSLLSSDGSEDITISVNSSPNKLVGSHVSPNPLFSTVGGGILCAKASMLLQN 480

Query: 457 VPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEH 516
           VPPALLVRFLREHRSEWAD  VDAYSAASL+A  YA PG+R + F GSQ+I+PL HT+EH
Sbjct: 481 VPPALLVRFLREHRSEWADPGVDAYSAASLRASPYAVPGLRTSGFMGSQVILPLAHTLEH 540

Query: 517 EELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPL 576
           EE LEVIRLEGH  + ++  +SRD++LLQ+CSGVDENA  A ++LVFAPIDE F DD PL
Sbjct: 541 EEFLEVIRLEGHGFSHDEVLLSRDMYLLQLCSGVDENATSASAQLVFAPIDESFADDAPL 600

Query: 577 LPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAF 636
           LPSGFR+IPLD+K     D  +A RTLDL S+LEVGP     A   +S    RSVLTIAF
Sbjct: 601 LPSGFRVIPLDTKM----DGPSATRTLDLASALEVGPGGASRASVEASGTCNRSVLTIAF 656

Query: 637 QFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHW 696
           QF +E++L+++VA MAR YVR+V++SVQRVA+AI PS L P +G K  P SPEALTLA W
Sbjct: 657 QFSYENHLRESVAAMARSYVRAVMASVQRVAVAIAPSRLGPQIGMKHPPASPEALTLASW 716

Query: 697 ICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           I +SY  H GA++  SD+   DS L  LW+HSDAILCCSLK
Sbjct: 717 IGRSYRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLK 757


>gi|169730542|gb|ACA64837.1| SKIP interacting protein 22 [Oryza sativa]
          Length = 855

 Score = 1029 bits (2660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/761 (67%), Positives = 604/761 (79%), Gaps = 28/761 (3%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MA      + ++  SSS +    Q+D GKYVRYT EQVEALERVY+ECPKPSSLRRQQLI
Sbjct: 1   MAAAAVGGRGERLSSSSPTAAAPQVDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLI 60

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKL AMNKLLMEENDRLQKQVS
Sbjct: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVS 120

Query: 121 QLVCENGYMKQQLRT-APATTDASCDSVVTTPQHSL----------RDANNPAGLLSIAE 169
           +LV ENGYM+ QL   + ATTD SC+SVVT+ QH            RDANNPAGLL+IAE
Sbjct: 121 RLVYENGYMRTQLHNPSAATTDTSCESVVTSGQHHQQQNPAVLHPQRDANNPAGLLAIAE 180

Query: 170 ETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEI 229
           ETLAEF+SKATGTAV+WVQM GMKPGPDS+GI  +S +CSGVAARACGLVSLEPTK+AEI
Sbjct: 181 ETLAEFMSKATGTAVEWVQMVGMKPGPDSIGIITVSHNCSGVAARACGLVSLEPTKVAEI 240

Query: 230 LKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGS 289
           LKDRPSW+RDCR +++  + P GN GTIEL+Y Q +APTTLA  RDFWTLRYT+ L++GS
Sbjct: 241 LKDRPSWYRDCRCVDIIHVIPTGNGGTIELIYMQTHAPTTLAAPRDFWTLRYTSGLEDGS 300

Query: 290 LVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPE 349
           LV+CERSL+ S  GP+  +   F+RAE+LPSG LIRPC+GGGS+I+IVDH++L+AWSVPE
Sbjct: 301 LVICERSLTQSTGGPSGPNTLNFIRAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPE 360

Query: 350 VLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDA 399
           VLRPLYES K++AQ+MTIA          E+SGE+ YG GRQPAV RTFSQRLSRGFNDA
Sbjct: 361 VLRPLYESPKILAQKMTIAALRHIRQIAHESSGEIPYGAGRQPAVFRTFSQRLSRGFNDA 420

Query: 400 VNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQN 456
           V+GF DDGWSL++ DG+ED+ I+VNS+ +    S+ + +  F    GGILCAKASMLLQN
Sbjct: 421 VSGFPDDGWSLLSSDGSEDITISVNSSPNKLVGSHVSPNPLFSTVGGGILCAKASMLLQN 480

Query: 457 VPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEH 516
           VPPALLVRFLREHRSEWAD  VDAYSAASL+A  YA PG+R + F GSQ+I+PL HT+EH
Sbjct: 481 VPPALLVRFLREHRSEWADPGVDAYSAASLRASPYAVPGLRTSGFMGSQVILPLAHTLEH 540

Query: 517 EELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPL 576
           EE LEVIRLEGH  + ++  +SRD++LLQ+CSGVDENA  A ++LVFAPIDE F DD PL
Sbjct: 541 EEFLEVIRLEGHGFSHDEVLLSRDMYLLQLCSGVDENATSASAQLVFAPIDESFADDAPL 600

Query: 577 LPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAF 636
           LPSGFR+IPLD+K     D  +A RTLDL S+LEVGP     A   +S    RSVLTIAF
Sbjct: 601 LPSGFRVIPLDTKM----DGPSATRTLDLASALEVGPGGASRASVEASGTCNRSVLTIAF 656

Query: 637 QFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHW 696
           QF +E++L+++VA MAR YVR+V++SVQRVA+AI PS L P +G K  P SPEALTLA W
Sbjct: 657 QFSYENHLRESVAAMARSYVRAVMASVQRVAVAIAPSRLGPQIGMKHPPASPEALTLASW 716

Query: 697 ICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           I +SY  H GA++  SD+   DS L  LW+HSDAILCCSLK
Sbjct: 717 IGRSYRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLK 757


>gi|449488526|ref|XP_004158070.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Cucumis
           sativus]
          Length = 844

 Score = 1027 bits (2655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/742 (69%), Positives = 595/742 (80%), Gaps = 29/742 (3%)

Query: 19  SINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 78
           S+NK Q+D  KYVRYT EQV+ALERVY+ECPKPSSLRRQQLIRECPILSNIEPKQIKVWF
Sbjct: 9   SLNK-QMDTSKYVRYTPEQVDALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 67

Query: 79  QNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPA 138
           QNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQ QVS+LV ENGYM+QQL TA  
Sbjct: 68  QNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQTQVSRLVYENGYMRQQLHTASG 127

Query: 139 TT-DASCDSVVTTPQ---------HSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQ 188
           TT D SC+SVV + Q         H+ +DANNPAGLL+IAEETLAEFLSKATGTAVDWVQ
Sbjct: 128 TTTDNSCESVVMSGQQHQQQNPTKHTQKDANNPAGLLAIAEETLAEFLSKATGTAVDWVQ 187

Query: 189 MPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTM 248
           M GMKPGPDS+GI A+S++C+GVAARACGLVSLEP K+AEILKDR SWFRDCR ++V ++
Sbjct: 188 MIGMKPGPDSIGIVAVSRNCNGVAARACGLVSLEPMKVAEILKDRLSWFRDCRCVDVLSV 247

Query: 249 FPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPAS 308
              GN GTIELLY Q YAPTTLA ARDFWTLRYTT+L++GSLV+CERSL+ S  GP+   
Sbjct: 248 ISTGNGGTIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTLSTGGPSGPP 307

Query: 309 AAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA 368
            + FVRAEMLPSG LIR C+ GGS+IHIVDH++L+ WSVPEVLRPLYES+K++AQR T+A
Sbjct: 308 PSSFVRAEMLPSGYLIRACE-GGSLIHIVDHVDLDVWSVPEVLRPLYESTKILAQRTTVA 366

Query: 369 ----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAED 418
                     E SGEV  G GRQPAVLRTFSQRL RGFNDAVNGF DDGWSLM  DG ED
Sbjct: 367 ALRYVRQIAQEASGEVQLGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMDSDGVED 426

Query: 419 VIIAVNSTKSLSTASNPTNSLA-FLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
           V + +NS+ +    S    SL    GG+LCAKASMLLQNVPPALLVRFLREHRSEWAD+ 
Sbjct: 427 VTVVINSSPNKFLGSQYNTSLYPTFGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYG 486

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
           VDAYSAA LKA +YA P  RP  F G Q+I+PL HT+E+EE LEV+RLEGH++  E+A +
Sbjct: 487 VDAYSAACLKASAYAVPCARPGGFPGGQVILPLAHTVENEEFLEVVRLEGHAMFPEEAAL 546

Query: 538 -SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDT 596
             RD++LLQ+CSGVDEN VGAC++LVFAPIDE F DD PLLPSGFR+IPL+SK  + P  
Sbjct: 547 GGRDMYLLQLCSGVDENTVGACAQLVFAPIDESFADDAPLLPSGFRVIPLESKA-EMPG- 604

Query: 597 LTAHRTLDLTSSLEVGPATN-PAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
             A RTLDL S+LEV P TN P      + ++ RSVLTIAFQF FE++++D+VA MARQY
Sbjct: 605 --ATRTLDLASTLEVRPGTNRPGCETDVTNYNLRSVLTIAFQFTFENHMRDSVAAMARQY 662

Query: 656 VRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSV 715
           VR+V+ SVQRVAMAI PS L   +GPK  P SPEALTLA WI +SY  H GAEL + +S 
Sbjct: 663 VRTVVGSVQRVAMAIAPSQLGSQIGPKSLPASPEALTLAQWITRSYRIHSGAELFQVESQ 722

Query: 716 GGDSVLKNLWQHSDAILCCSLK 737
            GD++LK LW HSD ILCCS+K
Sbjct: 723 SGDAILKQLWHHSDTILCCSVK 744


>gi|449433543|ref|XP_004134557.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ATHB-9-like [Cucumis sativus]
          Length = 847

 Score = 1026 bits (2653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/742 (69%), Positives = 592/742 (79%), Gaps = 29/742 (3%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           +  Q+D+ KYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN
Sbjct: 10  SNKQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 69

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT 140
           RRCREKQRKE+SRLQ+VNRKL+AMNKLLMEENDRLQKQVS LV ENG+M+QQL +A  TT
Sbjct: 70  RRCREKQRKESSRLQSVNRKLSAMNKLLMEENDRLQKQVSHLVYENGFMRQQLHSASGTT 129

Query: 141 -DASCDSVVTT----------PQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
            D SC+SVV +          PQH  RD NNPAGLL++AEETLAEFLSKATGTAVDWVQM
Sbjct: 130 TDNSCESVVMSGQPQQQQNPNPQHPNRDVNNPAGLLAVAEETLAEFLSKATGTAVDWVQM 189

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
            GMKPGPDS+GI A+S++CSGVAARACGLVSLEPTK+AEILKDR SW+RDCR L V ++ 
Sbjct: 190 IGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRLSWYRDCRCLNVLSVI 249

Query: 250 PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA 309
           P GN GTIEL+Y Q YAPTTLA ARDFWT+RYTT+L++GSLVVCERSLS S  GP     
Sbjct: 250 PTGNGGTIELIYMQTYAPTTLAAARDFWTMRYTTSLEDGSLVVCERSLSSSSGGPAGPPP 309

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA- 368
           + FVRAEMLPSG LIR C+GGGSIIHIVDH++L+ WSVPEVLRPLYESSK++AQ++TIA 
Sbjct: 310 STFVRAEMLPSGYLIRACEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQKITIAA 369

Query: 369 ---------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                    ET+GE+    GRQPAVLRTFSQ+L RGFNDAVNGF DDGWS M  DG EDV
Sbjct: 370 LRHIRQIAQETNGEIQCTGGRQPAVLRTFSQKLCRGFNDAVNGFADDGWSPMGSDGVEDV 429

Query: 420 IIAVNSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
            I +N++ +  + S    SL  +F GG++CAKASMLLQNVPPALLVRFLREHRSEWAD+ 
Sbjct: 430 TILINTSANKFSGSQYNTSLYPSFGGGVMCAKASMLLQNVPPALLVRFLREHRSEWADYG 489

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEG-HSLAQEDAF 536
           VDAYSAASLKA  YA P  RP  F  SQ+I+PL  T+EHEE LEV+RLEG          
Sbjct: 490 VDAYSAASLKASPYAVPCARPGGFPSSQVILPLATTVEHEEFLEVVRLEGLAFFFFAFXX 549

Query: 537 VSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDT 596
               I   Q+CSGVDENAVGAC++LVFAPIDE F DD PLLPSGFR+IPLD KT    D 
Sbjct: 550 YLFSIFSWQLCSGVDENAVGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKT----DE 605

Query: 597 LTAHRTLDLTSSLEVGPATNPAAGDSS-SCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
            TA RTLDL S+LEVG     +AG++  S ++ RSVLTIAFQF FE++LQ+NVA MARQY
Sbjct: 606 PTAARTLDLASTLEVGANAARSAGETDLSNYNLRSVLTIAFQFTFENHLQENVAAMARQY 665

Query: 656 VRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSV 715
           VRSV+ SVQRVAMAI PS LS  +G K  PGSPEALTLA WIC+SY  H+GAELL++DS 
Sbjct: 666 VRSVVGSVQRVAMAISPSRLSSNMGLKPLPGSPEALTLARWICRSYRVHVGAELLQADSQ 725

Query: 716 GGDSVLKNLWQHSDAILCCSLK 737
            GD++LK LW HSDAI+CCS+K
Sbjct: 726 SGDAMLKQLWHHSDAIMCCSVK 747


>gi|356512574|ref|XP_003524993.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Glycine max]
          Length = 853

 Score = 1025 bits (2650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/755 (68%), Positives = 602/755 (79%), Gaps = 33/755 (4%)

Query: 9   QQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSN 68
           Q QQR+S+S   NK  +D GKYVRYT EQVEALERVY ECPKPSS RRQQ+IRECP+L+N
Sbjct: 6   QSQQRDSAS---NKLLMDCGKYVRYTPEQVEALERVYVECPKPSSSRRQQIIRECPLLAN 62

Query: 69  IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGY 128
           IE KQIKVWFQNRRCREKQRKEASRLQTVNRKL++MNKLLMEENDRLQKQVSQLV +NG+
Sbjct: 63  IETKQIKVWFQNRRCREKQRKEASRLQTVNRKLSSMNKLLMEENDRLQKQVSQLVYDNGF 122

Query: 129 MKQQLRTAPATT----DASCDSVVTTPQHSLR---------DANNPAGLLSIAEETLAEF 175
           MKQQ+ TA ATT    D SC+SVV + QH  +         DANNPAGLL+IA+ETL EF
Sbjct: 123 MKQQIHTASATTTTTTDNSCESVVVSGQHQPQNPKTQHPQWDANNPAGLLAIAQETLVEF 182

Query: 176 LSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPS 235
           LSKATGTAV+WVQM GMKPGPDS+GI A+S++CSGVAARACGLVSLEPTK+AEILKDRPS
Sbjct: 183 LSKATGTAVNWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPS 242

Query: 236 WFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCER 295
           W+RDCR L V ++  AGN GTIEL+Y Q YAPTTLA ARDFWTLRY+T+L++GSLV+CER
Sbjct: 243 WYRDCRCLNVLSVVSAGNGGTIELMYMQTYAPTTLAAARDFWTLRYSTSLEDGSLVICER 302

Query: 296 SLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLY 355
           SL+ S  GP   +A+ F+RAEMLPSG LIR C+GGGSIIHIVDH++L+ WSVPEVLRPLY
Sbjct: 303 SLTSSTGGPTGPAASNFIRAEMLPSGYLIRSCEGGGSIIHIVDHVDLDVWSVPEVLRPLY 362

Query: 356 ESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFND 405
           ES K +AQ++T A          E+SG+V YG GRQPAVLRTFSQRL +GFNDAVNGF D
Sbjct: 363 ESPKFLAQKLTTAALRHARQIAQESSGDVHYGGGRQPAVLRTFSQRLCKGFNDAVNGFVD 422

Query: 406 DGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLV 463
           DGWSLM  DG EDV IA+NS+ +    S+   S+  AF GG++CAKASMLLQNVPPALLV
Sbjct: 423 DGWSLMGNDGVEDVTIAINSSPNKFFGSHYNTSMLPAFGGGVMCAKASMLLQNVPPALLV 482

Query: 464 RFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVI 523
           RFLREHRSEWA++ VDAYS+A LKA  YA P  RP+ F  S +I+PL HTIEHEE LEV+
Sbjct: 483 RFLREHRSEWANYEVDAYSSACLKASPYAVPCARPSGFPSSHVIIPLAHTIEHEEFLEVV 542

Query: 524 RLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRI 583
           R+EG++   +D   + D++L+Q+CSG+DENA+GAC++LVFAPIDE F DD  LLPSGFRI
Sbjct: 543 RIEGNAFPPDDVAWACDMYLMQLCSGIDENAIGACAQLVFAPIDESFADDALLLPSGFRI 602

Query: 584 IPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHT-RSVLTIAFQFPFES 642
           IPLD KT    D L + RTLDL S+LE G     +AG+S S ++  RSVLTIAFQF FE+
Sbjct: 603 IPLDPKT----DGLASTRTLDLASTLETGSGNARSAGESDSNNYNLRSVLTIAFQFTFEN 658

Query: 643 NLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYS 702
           +L+DNVA MARQYVR+V+ SVQRVAMAI PS LS  LGPK  PG PEALTLA WIC+SY 
Sbjct: 659 HLRDNVAVMARQYVRNVVRSVQRVAMAIAPSRLSTQLGPKSFPGPPEALTLARWICRSYR 718

Query: 703 YHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
            H   EL   +S  GD++LK LW H DAILCCS+K
Sbjct: 719 LHTCTELFSVESTSGDAILKQLWHHPDAILCCSVK 753


>gi|449435534|ref|XP_004135550.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Cucumis
           sativus]
          Length = 844

 Score = 1025 bits (2650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/742 (69%), Positives = 595/742 (80%), Gaps = 29/742 (3%)

Query: 19  SINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 78
           S+NK Q+D  KYVRYT EQV+ALERVY+ECPKPSSLRRQQLIRECPILSNIEPKQIKVWF
Sbjct: 9   SLNK-QMDTSKYVRYTPEQVDALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 67

Query: 79  QNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPA 138
           QNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQ QVS+LV ENGYM+QQL TA  
Sbjct: 68  QNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQTQVSRLVYENGYMRQQLHTASG 127

Query: 139 TT-DASCDSVVTTPQ---------HSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQ 188
           TT D SC+SVV + Q         H+ +DANNPAGLL+IAEETLAEFLSKATGTAVDWVQ
Sbjct: 128 TTTDNSCESVVMSGQQHQQQNPTKHTQKDANNPAGLLAIAEETLAEFLSKATGTAVDWVQ 187

Query: 189 MPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTM 248
           M GMKPGPDS+GI A+S++C+GVAARACGLVSLEP K+AEILKDR SWFRDCR ++V ++
Sbjct: 188 MIGMKPGPDSIGIVAVSRNCNGVAARACGLVSLEPMKVAEILKDRLSWFRDCRCVDVLSV 247

Query: 249 FPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPAS 308
              GN GTIELLY Q YAPTTLA ARDFWTLRYTT+L++GSLV+CERSL+ S  GP+   
Sbjct: 248 ISTGNGGTIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPSGPP 307

Query: 309 AAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA 368
            + FVRAEMLPSG LIR C+ GGS+IHIVDH++L+ WSVPEVLRPLYES+K++AQR T+A
Sbjct: 308 PSSFVRAEMLPSGYLIRACE-GGSLIHIVDHVDLDVWSVPEVLRPLYESTKILAQRTTVA 366

Query: 369 ----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAED 418
                     E SGEV  G GRQPAVLRTFSQRL RGFNDAVNGF DDGWSLM  DG ED
Sbjct: 367 ALRYVRQIAQEASGEVQLGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMDSDGVED 426

Query: 419 VIIAVNSTKSLSTASNPTNSLA-FLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
           V + +NS+ +    S    SL    GG+LCAKASMLLQNVPPALLVRFLREHRSEWAD+ 
Sbjct: 427 VTVVINSSPNKFLGSQYNTSLYPTFGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYG 486

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
           VDAYSAA LKA +YA P  RP  F G Q+I+PL HT+E+EE LEV+RLEGH++  E+A +
Sbjct: 487 VDAYSAACLKASAYAVPCARPGGFPGGQVILPLAHTVENEEFLEVVRLEGHAMFPEEAAL 546

Query: 538 -SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDT 596
             RD++LLQ+CSGVDEN VGAC++LVFAPIDE F DD PLLPSGFR+IPL+SK  + P  
Sbjct: 547 GGRDMYLLQLCSGVDENTVGACAQLVFAPIDESFADDAPLLPSGFRVIPLESKA-EMPG- 604

Query: 597 LTAHRTLDLTSSLEVGPATN-PAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
             A RTLDL S+LEV P TN P      + ++ RSVLTIAFQF FE++++D+VA MARQY
Sbjct: 605 --ATRTLDLASTLEVRPGTNRPGCETDVTNYNLRSVLTIAFQFTFENHMRDSVAAMARQY 662

Query: 656 VRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSV 715
           VR+V+ SVQRVAMAI PS L   +GPK  P SPEALTLA WI +SY  H GAEL + +S 
Sbjct: 663 VRTVVGSVQRVAMAIAPSQLGSQIGPKSLPASPEALTLAQWITRSYRIHSGAELFQVESQ 722

Query: 716 GGDSVLKNLWQHSDAILCCSLK 737
            GD++LK LW HSD ILCCS+K
Sbjct: 723 SGDAILKQLWHHSDTILCCSVK 744


>gi|357156427|ref|XP_003577453.1| PREDICTED: homeobox-leucine zipper protein HOX33-like [Brachypodium
           distachyon]
          Length = 875

 Score = 1025 bits (2649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/747 (68%), Positives = 597/747 (79%), Gaps = 32/747 (4%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q+D GKYVRYT EQVEALERVY+ECPKPSSLRRQQ+IR+CPIL NIEPKQIKVWFQNRRC
Sbjct: 38  QVDTGKYVRYTPEQVEALERVYTECPKPSSLRRQQIIRDCPILCNIEPKQIKVWFQNRRC 97

Query: 84  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN---GYMKQQLRTA-PAT 139
           REKQRKE+SR+QTVNRKLTAMNKLLMEENDRLQKQVS+LV EN     +K QLR A  AT
Sbjct: 98  REKQRKESSRMQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENMSAKSLKTQLRNASAAT 157

Query: 140 TDASCDSVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
           TD SC+SVVT+ QH            RDANNPAGLL+IAEETLAEFLSKATGTAV+WVQM
Sbjct: 158 TDTSCESVVTSGQHHQQQNPAAPRPQRDANNPAGLLAIAEETLAEFLSKATGTAVEWVQM 217

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
            GMKPGPDS+GI A+S +CSGVAARACGLVSLEPTK+AEILKDRPSW+RDCR +++  + 
Sbjct: 218 VGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDILHVI 277

Query: 250 PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA 309
           P GN GTIEL+Y Q YAPTTL   RDFWTLRYT+ L++GSLV+CERSL+ S  GP+  + 
Sbjct: 278 PTGNGGTIELIYMQTYAPTTLVAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNT 337

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA- 368
             F+RAE+LPSG LIRPC+GGGS+IHIVDH++L+AWSVPEVLRPLYES K++AQ+ TIA 
Sbjct: 338 PNFIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKTTIAA 397

Query: 369 ---------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                    E+SGE+ YG GRQPAVLRTFSQRLSRGFNDAV+GF DDGWSL++ DG+ED+
Sbjct: 398 LRHIRQIAHESSGEIPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSLLSSDGSEDI 457

Query: 420 IIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADF 476
            I VNS+ +    S+ + S  F    GGILCAKASMLLQNVPPALLVRFLREHRSEWAD 
Sbjct: 458 TITVNSSPNKLAGSHVSPSPLFSAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADP 517

Query: 477 NVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAF 536
            VDAYSAASL+A  YA PG+R   F GSQ+I+PL HT+EHEE LEV+RLEGH  + ++  
Sbjct: 518 GVDAYSAASLRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVLRLEGHGFSHDEVL 577

Query: 537 VSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDT 596
           ++RD++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPLD+KT    D 
Sbjct: 578 LARDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDTKT----DV 633

Query: 597 LTAHRTLDLTSSLEVGPATN-PAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
            +A RTLDL S+LEVG       + D+S   + RSVLTIAFQF FE++L+++VA MARQY
Sbjct: 634 PSATRTLDLASALEVGSGGALRGSSDASGTCNMRSVLTIAFQFSFENHLRESVAAMARQY 693

Query: 656 VRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSV 715
           VR+V++SVQRVAMAI PS L   +  K  PGSPEALTLA WI +SYS H GAE+  S++ 
Sbjct: 694 VRAVMASVQRVAMAIAPSRLGSQIELKHPPGSPEALTLASWIGKSYSAHTGAEIRWSNTE 753

Query: 716 GGDSVLKNLWQHSDAILCCSLKVPLQF 742
             DS L  LW HSDAILCCSLK    F
Sbjct: 754 DADSPLMLLWNHSDAILCCSLKAAPMF 780


>gi|89514871|gb|ABD75310.1| class III homeodomain-leucine zipper protein C3HDZ2 [Pseudotsuga
           menziesii]
          Length = 839

 Score = 1025 bits (2649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/735 (69%), Positives = 589/735 (80%), Gaps = 28/735 (3%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           ++ GKYVRYTAEQVEALER+Y++CPKPSSLRRQQLIRECPILS+IEPKQIKVWFQNRRCR
Sbjct: 13  MEAGKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQNRRCR 72

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATTDAS 143
           EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +QQ++T   ATTD S
Sbjct: 73  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQIQTVSIATTDTS 132

Query: 144 CDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPG 195
           C+SVVT        TPQH  RDAN PAG LSIAEETL +FLSKAT TAVDW+QMPGMKPG
Sbjct: 133 CESVVTSGPHQHHLTPQHPPRDAN-PAGFLSIAEETLTQFLSKATETAVDWIQMPGMKPG 191

Query: 196 PDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAG 255
           PDS+GI  IS SC+G+AARACG   LEP+K+A+ILKDRP+W  DCR L+V T FP G  G
Sbjct: 192 PDSIGIVTISNSCTGIAARACGFAGLEPSKVADILKDRPAWLHDCRCLDVLTAFPTGKGG 251

Query: 256 TIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRA 315
           TIELLYTQ YAPTTLAPARD WTLRYT+ L++GSLVVCERSL+G+ +GPN  S   FVRA
Sbjct: 252 TIELLYTQMYAPTTLAPARDLWTLRYTSLLEDGSLVVCERSLTGTQSGPNMPSVQHFVRA 311

Query: 316 EMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------- 368
           +MLPSG LIRPC+GGG IIHIVDH++LE W+VPEV+RPLYESS V+AQ+MTI        
Sbjct: 312 QMLPSGYLIRPCEGGGCIIHIVDHMDLEPWTVPEVIRPLYESSAVLAQKMTITALRHLRQ 371

Query: 369 ---ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
              E SGEVV G GRQPA LR FSQRL RGFNDAVNGF DDGWSL+  DG EDVIIA+NS
Sbjct: 372 VAQEVSGEVVLGWGRQPAALRAFSQRLCRGFNDAVNGFVDDGWSLLGSDGVEDVIIAINS 431

Query: 426 T--KSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYS 482
           T  K L +    ++ L+ L GGILCAKASMLLQNVPPAL VRFLREHRSEWAD N+DAYS
Sbjct: 432 TPNKLLGSQLASSDGLSALNGGILCAKASMLLQNVPPALPVRFLREHRSEWADCNIDAYS 491

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
           +A++KA ++  PG      TGSQ+I+PL HT+EHEE LEVI+LEGH L  E+A +S+D+ 
Sbjct: 492 SATMKANAFNVPGSL-GGITGSQVILPLAHTVEHEEFLEVIKLEGHGLTHEEALLSKDMF 550

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRT 602
           LLQ+CSG+DE A G C++L FAPID  F DD PLLPSGFR+IPL+S +    DT   +RT
Sbjct: 551 LLQLCSGIDEQAAGFCAQLAFAPIDASFADDAPLLPSGFRVIPLESGS----DTSPPNRT 606

Query: 603 LDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISS 662
           LDL S+LEVG A   A+GD     + RSVLTIAFQF ++++++DNVA+MARQYVR VI+S
Sbjct: 607 LDLASALEVGSAGARASGDCGDSPNLRSVLTIAFQFTYQNHVRDNVASMARQYVRHVIAS 666

Query: 663 VQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLK 722
           VQRV++A+ PS  SP LGP+  PG+PEALTL  WICQSY  HLG ELL S+S   +SVLK
Sbjct: 667 VQRVSVALAPSLQSPHLGPRPPPGTPEALTLTRWICQSYRMHLGLELLGSNSETNESVLK 726

Query: 723 NLWQHSDAILCCSLK 737
            LW HSD I+CCS K
Sbjct: 727 LLWHHSDGIMCCSWK 741


>gi|90110452|gb|ABD90528.1| class III homeodomain-leucine zipper [Pseudotsuga menziesii]
          Length = 840

 Score = 1023 bits (2644), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/736 (69%), Positives = 591/736 (80%), Gaps = 29/736 (3%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           ++ GKYVRYTAEQVEALER+Y++CPKPSSLRRQQLIRECPILS+IEPKQIKVWFQNRRCR
Sbjct: 13  MEAGKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQNRRCR 72

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATTDAS 143
           EKQRK ASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +QQ++T   ATTD S
Sbjct: 73  EKQRKGASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQIQTVSIATTDTS 132

Query: 144 CDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPG 195
           C+SVVT        TPQH  RDAN PAG LSIAEETL +FLSKAT TAVDW+QMPGMKPG
Sbjct: 133 CESVVTSGPHQHHLTPQHPPRDAN-PAGFLSIAEETLTQFLSKATETAVDWIQMPGMKPG 191

Query: 196 PDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAG 255
           PDS+GI  IS SC+G+AARACG   LEP+K+A+ILKDRP+W  DCR L+V T FP G  G
Sbjct: 192 PDSIGIVTISNSCTGIAARACGFAGLEPSKVADILKDRPAWLHDCRCLDVLTAFPTGKGG 251

Query: 256 TIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRA 315
           TIELLYTQ YAPTTLAPARD WTLRYT+ L++GSLVVCERSL+G+ +GPN  S   FVRA
Sbjct: 252 TIELLYTQMYAPTTLAPARDLWTLRYTSLLEDGSLVVCERSLTGTQSGPNMPSVQHFVRA 311

Query: 316 EMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------- 368
           +MLPSG LIRPC+GGG IIHIVDH++LE W+VPEV+RPLYESS V+AQ+MTI        
Sbjct: 312 QMLPSGYLIRPCEGGGCIIHIVDHMDLEPWTVPEVIRPLYESSAVLAQKMTITALRHLRQ 371

Query: 369 ---ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
              E SGEVV G GRQPA LR FSQRL RGFNDAVNGF DDGWSL+  DG EDVIIA+NS
Sbjct: 372 VAQEVSGEVVLGWGRQPAALRAFSQRLCRGFNDAVNGFVDDGWSLLGSDGVEDVIIAINS 431

Query: 426 T--KSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYS 482
           +  K L +    ++ L+ L GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+DAYS
Sbjct: 432 SPNKLLGSQLASSDGLSALNGGILCAKASMLLQNVPPALLVRFLREHRSEWADCNIDAYS 491

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
           +A++KA ++  PG      TGSQ+I+PL HT+EHEE LEVI+LEGH L  E+A +S+D+ 
Sbjct: 492 SATMKANAFNVPGSL-GGITGSQVILPLAHTVEHEEFLEVIKLEGHGLTHEEALLSKDMF 550

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRT 602
           LLQ+CSG+DE A G C++L FAPID  F DD PLLPSGFR+IPL+S +    DT   +RT
Sbjct: 551 LLQLCSGIDEQAAGFCAQLAFAPIDASFADDAPLLPSGFRVIPLESGS----DTSPPNRT 606

Query: 603 LDLTSSLEVGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           LDL S+LEVG A   A+GD   S ++ RSVLTIAFQF ++++++DNVA+MARQYVR VI+
Sbjct: 607 LDLASALEVGSAGARASGDCGDSPYNLRSVLTIAFQFTYQNHVRDNVASMARQYVRHVIA 666

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVL 721
           SVQRV++A+ PS  SP LGP+  PG+PEALTL  WICQSY  HLG ELL S+S   +SVL
Sbjct: 667 SVQRVSVALAPSLQSPHLGPRPPPGTPEALTLTRWICQSYRMHLGLELLGSNSETNESVL 726

Query: 722 KNLWQHSDAILCCSLK 737
           K LW HSD I+CCS K
Sbjct: 727 KLLWHHSDGIMCCSWK 742


>gi|89514875|gb|ABD75312.1| class III homeodomain-leucine zipper protein C3HDZ2 [Taxus globosa]
          Length = 843

 Score = 1022 bits (2643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/746 (69%), Positives = 594/746 (79%), Gaps = 32/746 (4%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           G   K  +D GKYVRYTAEQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 6   GKEGKGGMDPGKYVRYTAEQVEALERLYRDCPKPSSIRRQQLIRECPILSNIEPKQIKVW 65

Query: 78  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP 137
           FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +QQL+ A 
Sbjct: 66  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQLQNAS 125

Query: 138 -ATTDA-SCDSVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKATGTAVD 185
            ATTD  SC+SVVT+ QH            RDA+ PAGLLSIAEETL EFLSKATGTAV+
Sbjct: 126 IATTDNNSCESVVTSGQHQQQNHLTPRQPPRDAS-PAGLLSIAEETLTEFLSKATGTAVE 184

Query: 186 WVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEV 245
           W+QMPGMKPGPD++GI AIS  C+GVAARACGLV LEPTK+AEILKDRPSWFRDCRS++V
Sbjct: 185 WIQMPGMKPGPDAIGIVAISHGCTGVAARACGLVGLEPTKVAEILKDRPSWFRDCRSVDV 244

Query: 246 FTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPN 305
            T F  GN GT+E+LY Q YAPTTLAPARDF TLRYT+ +++GSLVVCERSLS  G+ P+
Sbjct: 245 LTAFSTGNGGTVEILYMQMYAPTTLAPARDFCTLRYTSVMEDGSLVVCERSLSDKGS-PS 303

Query: 306 PASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM 365
                 FVRAEM PSG LIRPC+GG SIIHIVDH++LE WSVPEVLRPLYESS V+AQR 
Sbjct: 304 MPPVPHFVRAEMFPSGYLIRPCEGGSSIIHIVDHMDLEPWSVPEVLRPLYESSAVLAQRT 363

Query: 366 TIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDG 415
           T+A          E S ++V G GRQPA LR FSQRL +GFN+A+NGF DDGWSLM  DG
Sbjct: 364 TMAALRRLRQVAQEVSSDMVLGWGRQPAALRMFSQRLCKGFNEAINGFTDDGWSLMGSDG 423

Query: 416 AEDVIIAVNS--TKSLSTASNPTNSL-AFLGGILCAKASMLLQNVPPALLVRFLREHRSE 472
            +DV I +NS  +K L +    T+ L AF GGILCAKASMLLQNVPP+LLVRFLREHRSE
Sbjct: 424 MDDVTILINSSPSKLLGSQLASTDGLPAFGGGILCAKASMLLQNVPPSLLVRFLREHRSE 483

Query: 473 WADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQ 532
           WAD N+DAYSAA+LKA   A P  R   F G Q+I+PL HT+EHEE LEVI+LE + L Q
Sbjct: 484 WADSNIDAYSAAALKASPCAVPTSRIGGFGGGQVILPLAHTVEHEEFLEVIKLECNGLTQ 543

Query: 533 EDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPD 592
           E+A +SRD+ LLQ+CSG+DENAVGAC+ELVFAPID    D  PLLPSGFR+IPLDS    
Sbjct: 544 EEALLSRDMFLLQLCSGIDENAVGACAELVFAPIDASLTDSAPLLPSGFRVIPLDSGI-- 601

Query: 593 TPDTLTAHRTLDLTSSLEVGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
             D+ + +RTLDL S+L+VGP  N  AGD   +  + RSVLTIAFQF +E++L++NVA+M
Sbjct: 602 --DSSSPNRTLDLASALDVGPTGNRPAGDYGGNSSNIRSVLTIAFQFTYENHLRENVASM 659

Query: 652 ARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLR 711
           ARQYVR+V++SVQRVAMA+ PS L   LGP+  PG+PEALTLA WICQSY +HLG ELLR
Sbjct: 660 ARQYVRNVVASVQRVAMALAPSRLGSHLGPRPPPGTPEALTLARWICQSYRFHLGVELLR 719

Query: 712 SDSVGGDSVLKNLWQHSDAILCCSLK 737
            +S   +SVLK LW HSDAI+CCSLK
Sbjct: 720 PNSEVNESVLKMLWHHSDAIMCCSLK 745


>gi|242086246|ref|XP_002443548.1| hypothetical protein SORBIDRAFT_08g021350 [Sorghum bicolor]
 gi|241944241|gb|EES17386.1| hypothetical protein SORBIDRAFT_08g021350 [Sorghum bicolor]
          Length = 857

 Score = 1018 bits (2631), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/766 (67%), Positives = 605/766 (78%), Gaps = 36/766 (4%)

Query: 1   MAMVIQQQQQQQRESSSGSINKH--QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQ 58
           MAMV     +++R S  G   +   Q+D GKYVRYT EQVEALERVYSECPKPSSLRRQQ
Sbjct: 1   MAMV---ASRERRLSPPGGAAQGAPQVDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQ 57

Query: 59  LIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQ 118
           LIR+CPILSNIEPKQIKVWFQNRRCREKQRKE+SRLQTVNRKL+AMNKLLMEENDRLQKQ
Sbjct: 58  LIRDCPILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQ 117

Query: 119 VSQLVCENGYMKQQLRT-APATTDASCDSVVTTPQHSL-----------RDANNPAGLLS 166
           VS+LV +NGYMK +L + + ATTD SC+SVVT+  H+            RDANNPAGLL+
Sbjct: 118 VSRLVFDNGYMKNRLHSPSVATTDTSCESVVTSGHHNQQQNPAVLHPPQRDANNPAGLLA 177

Query: 167 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKI 226
           IAEETLAEF+SKATGTAV+WVQM GMKPGPDSVGI A+S +CSGVAARACGLVSLEPTK+
Sbjct: 178 IAEETLAEFMSKATGTAVNWVQMVGMKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKV 237

Query: 227 AEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLD 286
           AEILKDR SW+RDCR +++  + P GN GTIEL+Y Q YA TTLA  RDFWTLRYT+ LD
Sbjct: 238 AEILKDRASWYRDCRHVDILHVIPTGNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLD 297

Query: 287 NGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWS 346
           +GSLV+CERSL+ S  GP+  +   F+RAE+LPSG LIRPCDGGGS+I+IVDH++L A S
Sbjct: 298 DGSLVICERSLTQSTGGPSGPNTPNFIRAEVLPSGYLIRPCDGGGSMIYIVDHVDLNASS 357

Query: 347 VPEVLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGF 396
           VPEVLRPLYES K++AQ+MT A          E+SGE+ YG+GRQPAVLRTFSQRLSRGF
Sbjct: 358 VPEVLRPLYESPKILAQKMTAAALRHIRQIAHESSGEMPYGVGRQPAVLRTFSQRLSRGF 417

Query: 397 NDAVNGFNDDGW-SLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASM 452
           NDAV+GF DDGW SL++ DGAED+ I++NS+ +    S+ + S  F    GGI+CAKASM
Sbjct: 418 NDAVSGFPDDGWSSLLSSDGAEDITISINSSPNKLIGSHVSPSPFFSAMGGGIMCAKASM 477

Query: 453 LLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGH 512
           LLQNVPPA+LVRFLREHRSEWAD  VDAYSAASL+A  YA PG+R   F G+Q+I+PL  
Sbjct: 478 LLQNVPPAILVRFLREHRSEWADPGVDAYSAASLRANPYAVPGLRAGGFMGNQVILPLAR 537

Query: 513 TIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPD 572
           T+EHEE LEVIRLEGH  + E+  +SRD+ LLQ+CSGVDENA GAC++LVFAPIDE F D
Sbjct: 538 TLEHEECLEVIRLEGHGFSHEEVLMSRDMFLLQLCSGVDENAPGACAQLVFAPIDESFAD 597

Query: 573 DGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATN-PAAGDSSSCHHTRSV 631
           D PLLPSGFR+IPLD+KT    D  +A RTLDL S+LEVG      A  DSS    TRSV
Sbjct: 598 DAPLLPSGFRVIPLDAKT----DVPSATRTLDLASALEVGSGGGLRALSDSSGTCTTRSV 653

Query: 632 LTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEAL 691
           LTIAFQF FE++L+D+VA MARQYVR V++SVQRVAMAI PS L P +  K  PGSPEAL
Sbjct: 654 LTIAFQFSFENHLRDSVAAMARQYVRGVMASVQRVAMAIAPSRLGPHIELKHPPGSPEAL 713

Query: 692 TLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
            LA WI +SY  H G E+  SD+ G DS L   W+HSDAILCCSLK
Sbjct: 714 ALATWIGRSYRAHTGTEIRWSDTEGADSPLMPFWKHSDAILCCSLK 759


>gi|110349542|gb|ABG73246.1| class III HD-Zip protein HDZ32 [Pinus taeda]
          Length = 844

 Score = 1017 bits (2630), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/738 (68%), Positives = 582/738 (78%), Gaps = 30/738 (4%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D GKYVRYTAEQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 14  MDQGKYVRYTAEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 73

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATTDAS 143
           EKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV ENGY +QQL+ A  ATTD S
Sbjct: 74  EKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYFRQQLQNASIATTDTS 133

Query: 144 CDSVVT----------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           C+SVVT          TP+   RDA+ PAGLLSIAEETL EFLSKA G AV+W+QMPGMK
Sbjct: 134 CESVVTSVKHQQQNHLTPRDPPRDAS-PAGLLSIAEETLTEFLSKAKGNAVEWIQMPGMK 192

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPD++GI  IS  C+GVAARAC LV ++PTK+AEILKDR SW RDCRS++V T F  GN
Sbjct: 193 PGPDAIGIVTISHGCTGVAARACSLVGIDPTKVAEILKDRTSWLRDCRSVDVLTAFSTGN 252

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIELLY Q YAPTTLA ARDFWTLRYT+ L++GSLVVCERSLSG+  GP+  +  QFV
Sbjct: 253 GGTIELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQGGPSMPAVQQFV 312

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEM PSG LIRPC+GGGS+IHIVDH++LE WSVPEVLRPLYESS V+AQ++T++     
Sbjct: 313 RAEMQPSGYLIRPCEGGGSLIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKVTMSALRHL 372

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                E S +VV G GRQPA LRTFSQRL +GFN+AVNGF DDGWSLM  DG EDV I V
Sbjct: 373 RQIAQEVSSDVVLGWGRQPAALRTFSQRLCKGFNEAVNGFTDDGWSLMGNDGMEDVTILV 432

Query: 424 NSTKSLSTASNPTNS---LAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDA 480
           NS+ S        +S    A  GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+DA
Sbjct: 433 NSSPSKLFGQQFASSDGLPALGGGILCAKASMLLQNVPPALLVRFLREHRSEWADSNIDA 492

Query: 481 YSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRD 540
           YSAAS KA     P  R   F G Q+I+PL HT+EHEE LEVI+LE H L QE+A +SRD
Sbjct: 493 YSAASWKASPCTVPSSRVGGFGGGQVILPLAHTVEHEEFLEVIKLENHGLTQEEALLSRD 552

Query: 541 IHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAH 600
           + LLQ+CSG+DENAVGAC+ELVFAPID    D  PLLPSGFR+IPLDS      D  + +
Sbjct: 553 MFLLQLCSGLDENAVGACAELVFAPIDASLADSSPLLPSGFRVIPLDSGM----DGSSPN 608

Query: 601 RTLDLTSSLEVGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           RTLDL SSLE+G A    + D   +  + RSVLTIAFQF FE++L++NVA+MARQYVR V
Sbjct: 609 RTLDLASSLEIGSAGARTSVDYGGNSGNLRSVLTIAFQFTFENHLRENVASMARQYVRGV 668

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMA+ PS L   LGP+L PG+PEALTLA W+CQSY +HLG ELLR +S   +S
Sbjct: 669 VASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNES 728

Query: 720 VLKNLWQHSDAILCCSLK 737
           +LK LW HSDAI+CCSLK
Sbjct: 729 LLKTLWHHSDAIMCCSLK 746


>gi|125532383|gb|EAY78948.1| hypothetical protein OsI_34053 [Oryza sativa Indica Group]
          Length = 799

 Score = 1017 bits (2630), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/723 (70%), Positives = 580/723 (80%), Gaps = 32/723 (4%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+GKYVRYT EQVEALERVY+ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNRRCR
Sbjct: 1   MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCR 60

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +KQRKEASRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN YMKQQL+      D SC
Sbjct: 61  DKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLGNDTSC 120

Query: 145 DSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAI 204
           +S VTTPQ+ LRDA+NP+GLL+IAEETL EFLSKATGTAVDWV MPGMK           
Sbjct: 121 ESNVTTPQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMK----------- 169

Query: 205 SQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQA 264
                 V  +           I EILKDRPSWFRDCRSLEVFTMFPAGN GTIEL+Y Q 
Sbjct: 170 ------VDCQLLRFTLPASNDIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYMQM 223

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
           YAPTTL PARDFWTLRYTTT+D+GSLVVCERSLSGSG GP+ ASA QFVRAEMLPSG L+
Sbjct: 224 YAPTTLVPARDFWTLRYTTTMDDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLPSGYLV 283

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEV 374
           RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT A          ETSGEV
Sbjct: 284 RPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEV 343

Query: 375 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
           VY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDVIIA N+ K  +T+++
Sbjct: 344 VYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNAKKVRNTSTS 403

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYP 494
             N+    GG++CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N DAYSA+SLK  S + P
Sbjct: 404 -ANAFVTPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSASSLKTSSCSLP 462

Query: 495 GMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENA 554
           G+RP RF+GSQIIMPL HT+E+EE+LEV+RLEG +L  +D  +SRDIHLLQ+C+G+DE +
Sbjct: 463 GLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLLQLCTGIDEKS 522

Query: 555 VGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPA 614
           +G+C +LVFAPIDE+FPDD PL+ SGFR+IPLD KT  TP    A RTLDL SSLEVG  
Sbjct: 523 MGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGTP----AGRTLDLASSLEVGST 578

Query: 615 TNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSG 674
             P    S    + RSVLTIAFQFP+E +LQD+VATMARQYVRS++SSVQRV+MAI PS 
Sbjct: 579 AQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVSMAISPSR 638

Query: 675 LSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCC 734
                G K+  G PEA TLA WICQSY +HLG ELLR     G+++LK LW + DAILCC
Sbjct: 639 SGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCC 698

Query: 735 SLK 737
           S K
Sbjct: 699 SFK 701


>gi|326504574|dbj|BAJ91119.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 880

 Score = 1014 bits (2621), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 505/738 (68%), Positives = 589/738 (79%), Gaps = 28/738 (3%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q+D GKYVRYT EQVEALERVY+ECPKPSSLRRQQ+IR+CPIL NIEPKQIKVWFQNRRC
Sbjct: 47  QVDTGKYVRYTPEQVEALERVYNECPKPSSLRRQQIIRDCPILCNIEPKQIKVWFQNRRC 106

Query: 84  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN---GYMKQQLRTA-PAT 139
           REKQRKE+SR+QTVNRKLTAMNKLLMEENDRLQKQVS+LV EN     +K ++  A  AT
Sbjct: 107 REKQRKESSRMQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENVSAKSLKTKIHNASAAT 166

Query: 140 TDASCDSVVTTPQHSL-------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           TD SC+SVVT+ Q          RDANNPAGLL+IAEETL  F+SKATGTAV+WVQM GM
Sbjct: 167 TDTSCESVVTSGQQQALAAPRPQRDANNPAGLLAIAEETLTAFMSKATGTAVEWVQMMGM 226

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI A+S +C GVAARACGLVSLEPTK+AEILKDRPSW+RDCR +++  +FP G
Sbjct: 227 KPGPDSIGIIAVSHNCIGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDILHVFPTG 286

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIEL+Y Q YAPTTLA  RDFWTLRYT  L++GSLV+CERSL+ S  GP+  +   F
Sbjct: 287 NGGTIELIYMQTYAPTTLAAPRDFWTLRYTCGLEDGSLVICERSLTQSTGGPSGPNTPGF 346

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           +RAE+LPSG LIRPC+GGGS+IHIVDH++L+AWSVPEVLRPLYES K+VAQ+MTIA    
Sbjct: 347 IRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKIVAQKMTIAALRH 406

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E+SGE+ YG GRQPAVLRTFSQRLSRGFNDAV+GF DDGWSL+T DGAED+ I 
Sbjct: 407 IRQIAHESSGEIPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSLLTSDGAEDITIT 466

Query: 423 VNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           VNS+ +    S+ + S  F    GGILCAKASML+Q+VPPALLVRFLREHRSEWAD  VD
Sbjct: 467 VNSSPNKLVGSHISPSPLFSAIGGGILCAKASMLVQDVPPALLVRFLREHRSEWADPGVD 526

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAASL+A  YA PG+R   F G+Q+I+PL HT+EHEE LEV+RLEGH  + ++  ++R
Sbjct: 527 AYSAASLRASPYAVPGLRAGGFMGNQVILPLAHTLEHEEFLEVLRLEGHGFSHDEVLLAR 586

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPLD+KT    D  +A
Sbjct: 587 DMYLLQLCSGVDENASGACAQLVFAPIDESFADDAPLLPSGFRVIPLDTKT----DVPSA 642

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
            RTLDL S+LEVG          S    TRSVLTIAFQF FE++L+++VA MARQYVR+V
Sbjct: 643 TRTLDLASALEVGSGGALRGSGDSPGGCTRSVLTIAFQFSFENHLRESVAAMARQYVRAV 702

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMAI PS L   +  K  PGSPEALTLA WI +SY  H G E+  SD+   DS
Sbjct: 703 MASVQRVAMAIAPSRLGSQIQLKHPPGSPEALTLASWIGRSYRAHTGEEIRWSDTEEADS 762

Query: 720 VLKNLWQHSDAILCCSLK 737
            LK LW HSDAILCCSLK
Sbjct: 763 PLKLLWNHSDAILCCSLK 780


>gi|15226808|ref|NP_181018.1| homeobox-leucine zipper protein ATHB-14 [Arabidopsis thaliana]
 gi|75096986|sp|O04291.1|ATB14_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-14; AltName:
           Full=HD-ZIP protein ATHB-14; AltName: Full=Homeodomain
           transcription factor ATHB-14; AltName: Full=Protein
           PHABULOSA
 gi|2145356|emb|CAA72007.1| HD-Zip protein [Arabidopsis thaliana]
 gi|3132474|gb|AAC16263.1| homeodomain transcription factor (ATHB-14) [Arabidopsis thaliana]
 gi|20152534|emb|CAD29659.1| homeodomain-leucine zipper protein 14 [Arabidopsis thaliana]
 gi|20466650|gb|AAM20642.1| homeodomain transcription factor [Arabidopsis thaliana]
 gi|23198254|gb|AAN15654.1| homeodomain transcription factor [Arabidopsis thaliana]
 gi|330253918|gb|AEC09012.1| homeobox-leucine zipper protein ATHB-14 [Arabidopsis thaliana]
          Length = 852

 Score = 1013 bits (2618), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/737 (69%), Positives = 588/737 (79%), Gaps = 29/737 (3%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LD+GKYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 21  LDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 80

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT-DAS 143
           EKQRKEA+RLQTVNRKL AMNKLLMEENDRLQKQVS LV ENG+MK QL TA  TT D S
Sbjct: 81  EKQRKEAARLQTVNRKLNAMNKLLMEENDRLQKQVSNLVYENGHMKHQLHTASGTTTDNS 140

Query: 144 CDSVVTT----------PQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           C+SVV +          PQH  RDANNPAGLLSIAEE LAEFLSKATGTAVDWVQM GMK
Sbjct: 141 CESVVVSGQQHQQQNPNPQHQQRDANNPAGLLSIAEEALAEFLSKATGTAVDWVQMIGMK 200

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDS+GI AIS++CSG+AARACGLVSLEP K+AEILKDRPSW RDCRS++  ++ PAGN
Sbjct: 201 PGPDSIGIVAISRNCSGIAARACGLVSLEPMKVAEILKDRPSWLRDCRSVDTLSVIPAGN 260

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+YTQ YAPTTLA ARDFWTLRY+T L++GS VVCERSL+ +  GP    ++ FV
Sbjct: 261 GGTIELIYTQMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSLTSATGGPTGPPSSNFV 320

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEM PSG LIRPCDGGGSI+HIVDH++L+AWSVPEV+RPLYESSK++AQ+MT+A     
Sbjct: 321 RAEMKPSGFLIRPCDGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAALRHV 380

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEV YG GRQPAVLRTFSQRL RGFNDAVNGF DDGWS M  DGAEDV + +
Sbjct: 381 RQIAQETSGEVQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMGSDGAEDVTVMI 440

Query: 424 NSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           N +      S   NS   +F  G+LCAKASMLLQNVPPA+LVRFLREHRSEWAD+ VDAY
Sbjct: 441 NLSPGKFGGSQYGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLREHRSEWADYGVDAY 500

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
           +AASL+A  +A P  R   F  +Q+I+PL  T+EHEE LEV+RLEGH+ + ED  ++RD+
Sbjct: 501 AAASLRASPFAVPCARAGGFPSNQVILPLAQTVEHEESLEVVRLEGHAYSPEDMGLARDM 560

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
           +LLQ+CSGVDEN VG C++LVFAPIDE F DD PLLPSGFRIIPL+ K+  TP+  +A+R
Sbjct: 561 YLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRIIPLEQKS--TPNGASANR 618

Query: 602 TLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           TLDL S+LE G        D + C+  RSVLTIAFQF F+++ +D+VA+MARQYVRS++ 
Sbjct: 619 TLDLASALE-GSTRQAGEADPNGCNF-RSVLTIAFQFTFDNHSRDSVASMARQYVRSIVG 676

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS-VGGDSV 720
           S+QRVA+AI P   S  + P   P SPEALTL  WI +SYS H GA+L  SDS   GD++
Sbjct: 677 SIQRVALAIAPRPGS-NISPISVPTSPEALTLVRWISRSYSLHTGADLFGSDSQTSGDTL 735

Query: 721 LKNLWQHSDAILCCSLK 737
           L  LW HSDAILCCSLK
Sbjct: 736 LHQLWNHSDAILCCSLK 752


>gi|110349544|gb|ABG73247.1| class III HD-Zip protein HDZ33 [Pinus taeda]
          Length = 840

 Score = 1009 bits (2609), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/737 (68%), Positives = 587/737 (79%), Gaps = 31/737 (4%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           ++ GKYVRYTAEQVEALER+Y++CPKPSSLRRQQLIRECPILS+IEPKQIKVWFQNRRCR
Sbjct: 13  MEAGKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQNRRCR 72

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATTDAS 143
           EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +QQ++T    TTD S
Sbjct: 73  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQIQTVSITTTDTS 132

Query: 144 CDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPG 195
           C+SVVT        TPQH  RDA+ PAG LSIAEETL +FLSKAT TAVDW+QMPGMKPG
Sbjct: 133 CESVVTSGPHPHHLTPQHPPRDAS-PAGFLSIAEETLTQFLSKATETAVDWIQMPGMKPG 191

Query: 196 PDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAG 255
           PDS+GI  IS SC+GVAARACG   LEP+K+A+ILKDRP+W  DCR L+V T FP G  G
Sbjct: 192 PDSIGIVTISNSCTGVAARACGFAGLEPSKVADILKDRPAWLHDCRRLDVLTAFPTGKGG 251

Query: 256 TIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRA 315
             ELLYTQ YAPTTLAPARD  TLRYT+ L++GSLVVCERSL+G+ +GPN      FVR 
Sbjct: 252 AFELLYTQMYAPTTLAPARDLLTLRYTSLLEDGSLVVCERSLTGTQSGPNMPPVQHFVRT 311

Query: 316 EMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------- 368
           +MLPSG LIRPC+GGG IIHIVDH++LE WSVPEV+RPLYESS V+AQ+MTI        
Sbjct: 312 QMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVIRPLYESSAVLAQKMTITALRHLRQ 371

Query: 369 ---ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
              E SGEVV G GRQPA LR FSQRL RGFNDAVNGF DDGWSL+  DG EDVIIA+NS
Sbjct: 372 VAQEVSGEVVLGWGRQPAALRAFSQRLCRGFNDAVNGFADDGWSLLGSDGVEDVIIAINS 431

Query: 426 --TKSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYS 482
             +K LS+    ++ L+ L GGI+CAKASMLLQNVPPALLVRFLREHRSEWAD N+DAYS
Sbjct: 432 SPSKFLSSQIASSDGLSALNGGIMCAKASMLLQNVPPALLVRFLREHRSEWADCNIDAYS 491

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
           +A++KA +Y  PG      TGSQ+I+PL HT+EHEE LEVI+LEGH L  E+A +S+D+ 
Sbjct: 492 SATMKANAYNVPGSL-GGITGSQVILPLAHTVEHEEFLEVIKLEGHGLTHEEALLSKDMF 550

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRT 602
           LLQ+CSG+DE+A G CS+LVFAPID  F DD PLLPSGFR+IPL+S +  +P     +RT
Sbjct: 551 LLQLCSGIDEHAAGFCSQLVFAPIDASFADDAPLLPSGFRVIPLESGSDVSP----PNRT 606

Query: 603 LDLTSSLEVGPATNPAAGD--SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVI 660
           LDL S+LE+G A   A+GD   S C + RSVLTIAFQF +++N++D+VA M RQYVR+VI
Sbjct: 607 LDLASALEIGSAGTRASGDCGDSPC-NLRSVLTIAFQFTYQNNVRDSVAAMTRQYVRNVI 665

Query: 661 SSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSV 720
           +SVQRVA+A+ PS  SP +GP+L PG+PEALTL  WI QSY  HLG EL+  +S   +SV
Sbjct: 666 ASVQRVAIALAPSQQSPHIGPRLPPGTPEALTLTRWIFQSYRMHLGLELIGDNSEPNESV 725

Query: 721 LKNLWQHSDAILCCSLK 737
           LK LW HSD I+CCS K
Sbjct: 726 LKLLWHHSDGIMCCSWK 742


>gi|317160484|gb|ADV04324.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 845

 Score = 1008 bits (2607), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/739 (68%), Positives = 582/739 (78%), Gaps = 31/739 (4%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D GKYVRYTAEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 14  MDQGKYVRYTAEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 73

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATTDAS 143
           EKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV ENGY +QQL+ A  ATTD S
Sbjct: 74  EKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYFRQQLQNASIATTDTS 133

Query: 144 CDSVVT----------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           C+SVVT          TP+   RDA+ PAGLLSIAEETL EFLSKA G AV+W+QMPGMK
Sbjct: 134 CESVVTSVKHQQQNHLTPRDPPRDAS-PAGLLSIAEETLTEFLSKAKGNAVEWIQMPGMK 192

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPD++GI  IS  C+GVAARAC LV ++PTK+AEILKDR SW RDCRS++V T F  GN
Sbjct: 193 PGPDAIGIVTISHGCTGVAARACSLVGIDPTKVAEILKDRTSWLRDCRSVDVLTAFSTGN 252

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GT+ELLY Q YAPTTLA ARDFWTLRYT+ L++GSLVVCERSLSG+  GP+  +   FV
Sbjct: 253 GGTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQGGPSMPAVQHFV 312

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEM PSG LIRPC+GGGS+IHIVDH++LE WSVPEVLRPLYESS V+AQ++T+A     
Sbjct: 313 RAEMQPSGYLIRPCEGGGSLIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKVTMAALRHL 372

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                E S +VV G GRQPA LRTFSQRL +GFN+AVNGF DDGWSLM  DG +DV I +
Sbjct: 373 RQIAQEVSSDVVLGWGRQPAALRTFSQRLCKGFNEAVNGFTDDGWSLMGNDGMDDVTILI 432

Query: 424 NS--TKSLSTASNPTNSL-AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDA 480
           NS  +K L      ++ L A  GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+DA
Sbjct: 433 NSSPSKLLGQQFASSDGLPALGGGILCAKASMLLQNVPPALLVRFLREHRSEWADSNIDA 492

Query: 481 YSAASLKAGSYAYPGMR-PTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           YSAAS KA     P  R      G Q+I+PL HT+EHEE LEVI+LE + L QE+A +SR
Sbjct: 493 YSAASWKASPCTVPSSRIGGFGGGGQVILPLAHTVEHEEFLEVIKLENNGLTQEEALLSR 552

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D+ LLQ+CSG+DENAVGAC+ELVFAPID    D  PLLPSGFR+IPLDS      D  + 
Sbjct: 553 DMFLLQLCSGIDENAVGACAELVFAPIDASLADSSPLLPSGFRVIPLDSGM----DGSSP 608

Query: 600 HRTLDLTSSLEVGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
           +RTLDL S+LE+G A    + D   +  + RSVLTIAFQF FE++L++NVATMARQYVR 
Sbjct: 609 NRTLDLASALEIGSAGTRTSVDYGGNSSNLRSVLTIAFQFTFENHLRENVATMARQYVRG 668

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           V++SVQRVAMA+ PS L   LGP+L PG+PEALTLA W+CQSY +HLG ELLR +S   +
Sbjct: 669 VVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNE 728

Query: 719 SVLKNLWQHSDAILCCSLK 737
           SVLK LW HSDAI+CCSLK
Sbjct: 729 SVLKTLWHHSDAIMCCSLK 747


>gi|297826941|ref|XP_002881353.1| hypothetical protein ARALYDRAFT_902559 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327192|gb|EFH57612.1| hypothetical protein ARALYDRAFT_902559 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 859

 Score = 1006 bits (2601), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/737 (67%), Positives = 585/737 (79%), Gaps = 29/737 (3%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LD+GKYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 28  LDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 87

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT-DAS 143
           EKQRKEA+RLQTVNRKL AMNKLLMEENDRLQKQVS LV ENG+MKQQL T+  TT D S
Sbjct: 88  EKQRKEAARLQTVNRKLNAMNKLLMEENDRLQKQVSHLVYENGHMKQQLHTSSGTTTDNS 147

Query: 144 CDSVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           C+SVV + Q             RDANNPAGLLSIAEE LAEFLSKATGTAVDWVQM GMK
Sbjct: 148 CESVVVSGQQHQQQNPNPQHLQRDANNPAGLLSIAEEALAEFLSKATGTAVDWVQMIGMK 207

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDS+GI AIS++CSG+AARACGLVSLEP K+AEILKDRPSW RDCR ++  ++ PAGN
Sbjct: 208 PGPDSIGIVAISRNCSGIAARACGLVSLEPMKVAEILKDRPSWLRDCRCVDTLSVIPAGN 267

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+YTQ YAPTTLA ARDFWTLRY+T L++GS VVCERS++ +  GP    ++ FV
Sbjct: 268 GGTIELIYTQMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSITSATGGPTGPPSSSFV 327

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEM PSG LIRPC+GGGSI+HIVDH++L+AWSVPEV+RPLYESSK++AQ+MT+A     
Sbjct: 328 RAEMRPSGFLIRPCEGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAALRHV 387

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEV YG GRQPAVLRTFSQRL RGFNDAVNGF DDGWS M  DGAED+ + +
Sbjct: 388 RQIAQETSGEVQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMGSDGAEDITVMI 447

Query: 424 NSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           N +      S   NS   +F  G+LCAKASMLLQNVPPA+LVRFLREHRSEWAD+ VDAY
Sbjct: 448 NLSPGKLCGSQYGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLREHRSEWADYGVDAY 507

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
           +AASL+A  +A P  R   F  +Q+I+PL  T+EHEE LEV+RLEGH+ + ED  ++RD+
Sbjct: 508 AAASLRASPFAVPCARAGGFPSNQVILPLAQTVEHEESLEVVRLEGHAYSPEDMGLARDM 567

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
           +LLQ+CSGVDEN VG C++LVFAPIDE F DD PLLPSGFRIIPL+ K+  TP+  + +R
Sbjct: 568 YLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRIIPLEQKS--TPNGASTNR 625

Query: 602 TLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           TLDL S+LE G        D + C+  RSVLTIAFQF F+++ +D+VA+MARQYVRS++ 
Sbjct: 626 TLDLASALE-GSTRQAGEADPNGCNF-RSVLTIAFQFTFDNHSRDSVASMARQYVRSIVG 683

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS-VGGDSV 720
           S+QRVA+AI P   S  + P   P SPEALTL  WI +SYS H GA+L  SDS   GD++
Sbjct: 684 SIQRVALAIAPRPGS-NISPISVPTSPEALTLVRWIARSYSLHTGADLFGSDSQTSGDTL 742

Query: 721 LKNLWQHSDAILCCSLK 737
           L  LW H+DAILCCSLK
Sbjct: 743 LHQLWNHTDAILCCSLK 759


>gi|414877999|tpg|DAA55130.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 953

 Score = 1004 bits (2597), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/744 (68%), Positives = 589/744 (79%), Gaps = 31/744 (4%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q+D GKYVRYT EQVEALERVYSECPKPSSLRRQ LIR+CPIL NIEPKQIKVWFQNRRC
Sbjct: 116 QVDAGKYVRYTPEQVEALERVYSECPKPSSLRRQHLIRDCPILRNIEPKQIKVWFQNRRC 175

Query: 84  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT-APATTDA 142
           REKQRKE+SRLQTVNRKL+AMNKLLMEENDRLQKQVS+LV +NGYMK +L + + ATTD 
Sbjct: 176 REKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVFDNGYMKNRLHSPSVATTDT 235

Query: 143 SCDSVVTTPQHSL-----------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           SC+SVVT+ QH+            RDANNPAGLL+IAEETLAEF+SKATGTAV+WVQM G
Sbjct: 236 SCESVVTSGQHNQQQNPAVLHPPQRDANNPAGLLAIAEETLAEFMSKATGTAVNWVQMVG 295

Query: 192 MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA 251
           MKPGPDSVGI A+S +CSGVAARACGLVSLEPTK+AEILKDR SW+RDCR ++V  + P 
Sbjct: 296 MKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRASWYRDCRHVDVLHVIPT 355

Query: 252 GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQ 311
           GN GTIEL+Y Q YA TTLA  RDFWTLRYT+ LD+GSLV+CERSL+ S  GP+  +   
Sbjct: 356 GNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICERSLTQSTGGPSGPNTPN 415

Query: 312 FVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--- 368
           F+RAE+LPSG LIRPCDGGGS+I+IVDH+NL A SVPEVLRPLYES K++AQ+MT A   
Sbjct: 416 FIRAEVLPSGYLIRPCDGGGSMIYIVDHVNLNACSVPEVLRPLYESPKILAQKMTAAALR 475

Query: 369 -------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS-LMTCDGAEDVI 420
                  E+SGE+ YG GRQPAVLRTFSQRLSRGFNDAV+GF DDGWS L+  DGAED+ 
Sbjct: 476 HIRQIAHESSGEMPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSCLLNTDGAEDIT 535

Query: 421 IAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
           + +NS+ +    S+ + S  F    GGI+CAKASMLLQNVPPALLVRFLREHRSEWAD  
Sbjct: 536 VTINSSPNKLVGSHVSASPLFSAMGGGIMCAKASMLLQNVPPALLVRFLREHRSEWADPG 595

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
           +DAYS ASL+A  Y  PG+R   F G+Q+I+PL  T+EHEE LEVIRLEGH  + E+  +
Sbjct: 596 IDAYSVASLRANPYTVPGLRAGGFMGNQVILPLARTLEHEESLEVIRLEGHGFSHEEVLM 655

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTL 597
           SRD+ LLQ+CSGVDE+A GAC++LVFAPIDE F DD PLLPSGFR+IPLD+KT D P   
Sbjct: 656 SRDMFLLQLCSGVDEDAPGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKT-DVPTAT 714

Query: 598 TAHRTLDLTSSLEVGPATNP--AAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
           T  RTLDL S+LEVG   +   A+ D S    TRSVLTIAFQF FE++L+++VA MA+QY
Sbjct: 715 T--RTLDLASALEVGSGGSGMRASCDGSGTCATRSVLTIAFQFSFENHLRESVAAMAKQY 772

Query: 656 VRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSV 715
           VR V++SVQRVAMAI PS L   +  K  PGSPEAL LA WI +SY  H G E+  SD+ 
Sbjct: 773 VRGVMASVQRVAMAIAPSRLGSRIELKHPPGSPEALALATWIGRSYRAHTGTEIRWSDTE 832

Query: 716 GGDSVLKNLWQHSDAILCCSLKVP 739
           G DS L   W+HSDAILCCSLK P
Sbjct: 833 GADSPLMLFWKHSDAILCCSLKPP 856


>gi|226502384|ref|NP_001142394.1| uncharacterized protein LOC100274567 [Zea mays]
 gi|224030609|gb|ACN34380.1| unknown [Zea mays]
 gi|323388783|gb|ADX60196.1| HB homeobox transcription factor [Zea mays]
          Length = 854

 Score = 1004 bits (2597), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/744 (68%), Positives = 589/744 (79%), Gaps = 31/744 (4%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q+D GKYVRYT EQVEALERVYSECPKPSSLRRQ LIR+CPIL NIEPKQIKVWFQNRRC
Sbjct: 17  QVDAGKYVRYTPEQVEALERVYSECPKPSSLRRQHLIRDCPILRNIEPKQIKVWFQNRRC 76

Query: 84  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT-APATTDA 142
           REKQRKE+SRLQTVNRKL+AMNKLLMEENDRLQKQVS+LV +NGYMK +L + + ATTD 
Sbjct: 77  REKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVFDNGYMKNRLHSPSVATTDT 136

Query: 143 SCDSVVTTPQHSL-----------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           SC+SVVT+ QH+            RDANNPAGLL+IAEETLAEF+SKATGTAV+WVQM G
Sbjct: 137 SCESVVTSGQHNQQQNPAVLHPPQRDANNPAGLLAIAEETLAEFMSKATGTAVNWVQMVG 196

Query: 192 MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA 251
           MKPGPDSVGI A+S +CSGVAARACGLVSLEPTK+AEILKDR SW+RDCR ++V  + P 
Sbjct: 197 MKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRASWYRDCRHVDVLHVIPT 256

Query: 252 GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQ 311
           GN GTIEL+Y Q YA TTLA  RDFWTLRYT+ LD+GSLV+CERSL+ S  GP+  +   
Sbjct: 257 GNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICERSLTQSTGGPSGPNTPN 316

Query: 312 FVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--- 368
           F+RAE+LPSG LIRPCDGGGS+I+IVDH+NL A SVPEVLRPLYES K++AQ+MT A   
Sbjct: 317 FIRAEVLPSGYLIRPCDGGGSMIYIVDHVNLNACSVPEVLRPLYESPKILAQKMTAAALR 376

Query: 369 -------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS-LMTCDGAEDVI 420
                  E+SGE+ YG GRQPAVLRTFSQRLSRGFNDAV+GF DDGWS L+  DGAED+ 
Sbjct: 377 HIRQIAHESSGEMPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSCLLNTDGAEDIT 436

Query: 421 IAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
           + +NS+ +    S+ + S  F    GGI+CAKASMLLQNVPPALLVRFLREHRSEWAD  
Sbjct: 437 VTINSSPNKLVGSHVSASPLFSAMGGGIMCAKASMLLQNVPPALLVRFLREHRSEWADPG 496

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
           +DAYS ASL+A  Y  PG+R   F G+Q+I+PL  T+EHEE LEVIRLEGH  + E+  +
Sbjct: 497 IDAYSVASLRANPYTVPGLRAGGFMGNQVILPLARTLEHEESLEVIRLEGHGFSHEEVLM 556

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTL 597
           SRD+ LLQ+CSGVDE+A GAC++LVFAPIDE F DD PLLPSGFR+IPLD+KT D P   
Sbjct: 557 SRDMFLLQLCSGVDEDAPGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKT-DVPTAT 615

Query: 598 TAHRTLDLTSSLEVGPATNP--AAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
           T  RTLDL S+LEVG   +   A+ D S    TRSVLTIAFQF FE++L+++VA MA+QY
Sbjct: 616 T--RTLDLASALEVGSGGSGMRASCDGSGTCATRSVLTIAFQFSFENHLRESVAAMAKQY 673

Query: 656 VRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSV 715
           VR V++SVQRVAMAI PS L   +  K  PGSPEAL LA WI +SY  H G E+  SD+ 
Sbjct: 674 VRGVMASVQRVAMAIAPSRLGSRIELKHPPGSPEALALATWIGRSYRAHTGTEIRWSDTE 733

Query: 716 GGDSVLKNLWQHSDAILCCSLKVP 739
           G DS L   W+HSDAILCCSLK P
Sbjct: 734 GADSPLMLFWKHSDAILCCSLKPP 757


>gi|222625436|gb|EEE59568.1| hypothetical protein OsJ_11861 [Oryza sativa Japonica Group]
          Length = 807

 Score =  999 bits (2584), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/709 (70%), Positives = 575/709 (81%), Gaps = 29/709 (4%)

Query: 59  LIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQ 118
           LIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQ
Sbjct: 10  LIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQ 69

Query: 119 VSQLVCENGYMKQQLRT-APATTDASCDSVVTTPQHSL----------RDANNPAGLLSI 167
           VS+LV ENGYM+QQL   + ATTD SC+SVVT+ QH            RDANNPAGLL+I
Sbjct: 70  VSRLVYENGYMRQQLHNPSVATTDTSCESVVTSGQHHQQQNPAATRPQRDANNPAGLLAI 129

Query: 168 AEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIA 227
           AEETLAEFLSKATGTAVDWVQM GMKPGPDS+GI A+S +CSGVAARACGLVSLEPTK+A
Sbjct: 130 AEETLAEFLSKATGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVA 189

Query: 228 EILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDN 287
           EILKDRPSW+RDCR ++V  + P GN GTIEL+Y Q YAPTTLA  RDFW LRYT+ L++
Sbjct: 190 EILKDRPSWYRDCRCVDVLHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLED 249

Query: 288 GSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSV 347
           GSLV+CERSL+ S  GP+  +   FVRAE+LPSG LIRPC+GGGS+IHIVDH++L+AWSV
Sbjct: 250 GSLVICERSLTQSTGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSV 309

Query: 348 PEVLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFN 397
           PEVLRPLYES K++AQ+MTIA          E+SGE+ YG GRQPAVLRTFSQRLSRGFN
Sbjct: 310 PEVLRPLYESPKILAQKMTIAALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFN 369

Query: 398 DAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLL 454
           DAVNGF DDGWSLM+ DGAEDV IA NS+ +    S+  +S  F    GGILCAKASMLL
Sbjct: 370 DAVNGFPDDGWSLMSSDGAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLL 429

Query: 455 QNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTI 514
           QNVPPALLVRFLREHRSEWAD  VDAYSAA+L+A  YA PG+R   F GSQ+I+PL HT+
Sbjct: 430 QNVPPALLVRFLREHRSEWADPGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTL 489

Query: 515 EHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDG 574
           EHEE LEVIRLEGHSL  ++  +SRD++LLQ+CSGVDENA GAC++LVFAPIDE F DD 
Sbjct: 490 EHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDA 549

Query: 575 PLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLT 633
           PLLPSGFR+IPLD KT    D  +A RTLDL S+LEVG   T  A+ D+SS  +TRSVLT
Sbjct: 550 PLLPSGFRVIPLDGKT----DAPSATRTLDLASTLEVGSGGTTRASSDTSSTCNTRSVLT 605

Query: 634 IAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTL 693
           IAFQF +E++L+++VA MARQYVR+V++SVQRVAMAI PS L   +  K  PGSPEA TL
Sbjct: 606 IAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTL 665

Query: 694 AHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
           A WI +SY +H GA+LLR+DS   DS LK +WQHSD+I+CCSLK    F
Sbjct: 666 ARWIGRSYRFHTGADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKAAPVF 714


>gi|317160482|gb|ADV04323.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 836

 Score =  999 bits (2583), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/736 (68%), Positives = 581/736 (78%), Gaps = 33/736 (4%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           ++ GKYVRYTAEQVEALER+Y++CPKPSSLRRQQLIRECPILS+IEPKQIKVWFQNRRCR
Sbjct: 13  MEAGKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQNRRCR 72

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATTDAS 143
           EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +QQ++T   ATTD S
Sbjct: 73  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQIQTVSIATTDTS 132

Query: 144 CDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPG 195
           C+SVVT        TPQH  RDA+ PAG LSIAEETL + LSKAT TAVDW+QMPGMKPG
Sbjct: 133 CESVVTSGPHPHHLTPQHPPRDAS-PAGFLSIAEETLTQLLSKATETAVDWIQMPGMKPG 191

Query: 196 PDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAG 255
           PDS+GI  IS SC+GVAARACG   LEP+K+A+ILKDRP+W  DCR L V T FP G  G
Sbjct: 192 PDSIGIVTISNSCTGVAARACGFAGLEPSKVADILKDRPAWLHDCRCLNVLTAFPTGKGG 251

Query: 256 TIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRA 315
           T+E+LYTQ YAPTTLAPARD  TLRYT+ L++GSLVVCERSL+G  +GPN  S   FVRA
Sbjct: 252 TVEVLYTQMYAPTTLAPARDLLTLRYTSLLEDGSLVVCERSLTGIQSGPNMPSVQHFVRA 311

Query: 316 EMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------- 368
           +MLPSG LIRPC+GGG IIHIVDH++LE WSVPEV+RPLYESS V+A R+TI        
Sbjct: 312 QMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVIRPLYESSAVLATRVTITALRHLRQ 371

Query: 369 ---ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
              E SGEVV G GRQPA LR FSQRL RGFNDAVNGF DDGWSL+  DG EDVIIA+NS
Sbjct: 372 VAQEVSGEVVLGWGRQPAALRAFSQRLCRGFNDAVNGFVDDGWSLLGSDGVEDVIIAINS 431

Query: 426 TKSLSTASNPTNS---LAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYS 482
           + S    S   +S    A  GGILCAKASMLLQNVPPALLVRFLREHRSEWAD NVDAYS
Sbjct: 432 SPSKFLGSQLASSDGISALNGGILCAKASMLLQNVPPALLVRFLREHRSEWADCNVDAYS 491

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
           +A++KA +Y  PG      TGSQ+I+PL HT+EHEE LEVI+LEG  L  E+A +S+D+ 
Sbjct: 492 SATMKANAYNVPGSL-GGITGSQVILPLAHTVEHEEFLEVIKLEGQGLTHEEALLSKDMF 550

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRT 602
           LLQ+CSG+DE+AVG C++LVFAPID  F DD PLLPSGFR+IPL+S +  +P     +RT
Sbjct: 551 LLQLCSGIDEHAVGFCAQLVFAPIDASFADDAPLLPSGFRVIPLESGSDASP----PNRT 606

Query: 603 LDLTSSLEVGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           LDL S+LEVG A   A+GD   S ++ RSVLTIAFQF ++++++D+VA MARQYVR VI+
Sbjct: 607 LDLASALEVGSAGTRASGDCGDSPYNLRSVLTIAFQFTYQNHVRDSVAAMARQYVRHVIA 666

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVL 721
           SVQRVA+A+ PS  S    P   PG+PEALTLA WIC+SY  HLG EL+ S S   +SVL
Sbjct: 667 SVQRVAIALAPSLQS----PHPPPGTPEALTLARWICESYRMHLGLELIESSSETNESVL 722

Query: 722 KNLWQHSDAILCCSLK 737
           K LW HSD I+CCS K
Sbjct: 723 KLLWHHSDGIMCCSWK 738


>gi|449447807|ref|XP_004141659.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Cucumis
           sativus]
 gi|449480641|ref|XP_004155954.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Cucumis
           sativus]
          Length = 837

 Score =  998 bits (2580), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/738 (67%), Positives = 579/738 (78%), Gaps = 28/738 (3%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           NKH +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQN
Sbjct: 9   NKHGIDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TAPAT 139
           RRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +Q  + T    
Sbjct: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLGA 128

Query: 140 TDASCDSVVTTPQHSL------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
            D SC+ VVT+ QH+L      RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMK
Sbjct: 129 KDTSCEPVVTSGQHNLTSQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDS+GI AIS  C GVAARACGLV LEPT++AEILKD+PSWFRDCR+++V  + P  N
Sbjct: 188 PGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDQPSWFRDCRAVDVLNVLPTAN 247

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIELLY Q YAPTTLAPARDFW LRYT+ L++GSLV+CERSL  +  GP       FV
Sbjct: 248 GGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPTMPPVQHFV 307

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+MT+A     
Sbjct: 308 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTMAALRQL 367

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                E S   V G GR+PA LR+  QRL+RGFN+A+NGFND+GWS+M  DG +DV I V
Sbjct: 368 RQIAHEVSQSNVTGWGRRPAALRSLGQRLTRGFNEALNGFNDEGWSVMGNDGMDDVTILV 427

Query: 424 NSTKSLSTASNPTNSLAFLG---GILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDA 480
           NS+       N + +  F      +LCA+ASMLLQNVPPA+L+RFLREHRSEWAD N+DA
Sbjct: 428 NSSPDKLMGLNISFANGFSAISNAVLCARASMLLQNVPPAILLRFLREHRSEWADNNIDA 487

Query: 481 YSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRD 540
           YSAA++K G ++ PG R   F G+Q+I+PL HTIEHEE LEVI+LEG     EDA + R+
Sbjct: 488 YSAAAVKVGPWSLPGSRVGSF-GNQVILPLAHTIEHEEFLEVIKLEGIGHTPEDAMMPRE 546

Query: 541 IHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS-KTPDTPDTLTA 599
           + LLQ+CSG+DENA+G C+EL+FAPID  F DD PLLPSGFRIIPLDS K   +P+    
Sbjct: 547 MFLLQLCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPN---- 602

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
            RTLDL S+LE+GPA N    DS +   TRSV+TIAF+F FES++Q++VA+MARQYVRS+
Sbjct: 603 -RTLDLASALEIGPAGNRTPNDSVNSGCTRSVMTIAFEFAFESHMQEHVASMARQYVRSI 661

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ISSVQRVA+A+ PS LS   G +   G+PEA TLA WIC SY  +LG ELL+S + GG+ 
Sbjct: 662 ISSVQRVALALSPSHLSSHTGLRSPLGTPEAQTLARWICNSYRCYLGVELLKSGNEGGEL 721

Query: 720 VLKNLWQHSDAILCCSLK 737
           VLK LW HSDAI+CCSLK
Sbjct: 722 VLKTLWHHSDAIMCCSLK 739


>gi|255549852|ref|XP_002515977.1| DNA binding protein, putative [Ricinus communis]
 gi|223544882|gb|EEF46397.1| DNA binding protein, putative [Ricinus communis]
          Length = 839

 Score =  998 bits (2579), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/735 (68%), Positives = 575/735 (78%), Gaps = 29/735 (3%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LDNGKYVRYT EQVEALER+Y ECPKPSS+RRQQ IRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 14  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQFIRECPILSNIEPKQIKVWFQNRRCR 73

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TAPATTDAS 143
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +Q  + T  AT D S
Sbjct: 74  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLATKDTS 133

Query: 144 CDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
           CDSVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 134 CDSVVTSGQHHLTPQHQPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 192

Query: 198 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTI 257
           S+GI AIS  C+GVAARACGLV LEPT++AEILKDRPSWFRDCR+++V  + P  N GTI
Sbjct: 193 SIGIIAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANGGTI 252

Query: 258 ELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEM 317
           ELLY Q YAPTTLAPARDFW LRYT+ L++GSLV+CERSL  +  GP+      FVRAEM
Sbjct: 253 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQHFVRAEM 312

Query: 318 LPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------- 368
           LPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+ T+A         
Sbjct: 313 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQIA 372

Query: 369 -ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
            E S   V   GR+PA LR  SQRLSRGFN+A+NGF D+GWS+M  DG +DV I VNS+ 
Sbjct: 373 QEASQSNVTNWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGMDDVTILVNSSP 432

Query: 428 SLSTASNPTNSLAF---LGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAA 484
                 N + S  F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+DAYSAA
Sbjct: 433 EKLMGLNLSFSNGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAYSAA 492

Query: 485 SLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLL 544
           ++K G    PG R   F G Q+I+PL HTIEHEE LEVI+LEG   + ED  + RD+ LL
Sbjct: 493 AIKVGPCTLPGTRIGSF-GGQVILPLAHTIEHEEFLEVIKLEGAGHSPEDPIMPRDMFLL 551

Query: 545 QICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS-KTPDTPDTLTAHRTL 603
           Q+CSG+DENAVG C+EL+FAPID  F DD PLLPSGFRIIPLDS K   +P+     RTL
Sbjct: 552 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEASSPN-----RTL 606

Query: 604 DLTSSLEVGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISS 662
           DL S+LE+GPA N ++ D SS+    RSV+TIAF+F FES++Q++VA+MARQYVRS+ISS
Sbjct: 607 DLASALEIGPAGNKSSTDYSSNSGCMRSVMTIAFEFAFESHMQEHVASMARQYVRSIISS 666

Query: 663 VQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLK 722
           VQRVA+A+ PS      G +   G+PEA TLA WICQSY  +LG ELL+S S GG+S+LK
Sbjct: 667 VQRVALALSPSHSGSHAGLRTPLGTPEAQTLARWICQSYRCYLGVELLKSSSEGGESILK 726

Query: 723 NLWQHSDAILCCSLK 737
            LW HSDAI+CCSLK
Sbjct: 727 TLWHHSDAIMCCSLK 741


>gi|297743212|emb|CBI36079.3| unnamed protein product [Vitis vinifera]
          Length = 835

 Score =  993 bits (2567), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/742 (67%), Positives = 580/742 (78%), Gaps = 37/742 (4%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K  +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 7   KGIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 66

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TAPATT 140
           RCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +Q  + T  AT 
Sbjct: 67  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLATK 126

Query: 141 DASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP 194
           D SC+SVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKP
Sbjct: 127 DTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKP 185

Query: 195 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNA 254
           GPDS+GI AIS  C+GVAARACGLV LEPT++AEILKDRPSWFRDCR+++V  + P  N 
Sbjct: 186 GPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANG 245

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           GTIELLY Q YAPTTLAPARDFW LRYT+ +++GSLVVCERSL  +  GP+      FVR
Sbjct: 246 GTIELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQHFVR 305

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ 368
           AEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+ T+A      
Sbjct: 306 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLR 365

Query: 369 ----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
               E S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GWS+M  DG +DV I VN
Sbjct: 366 QIAQEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGIDDVTILVN 425

Query: 425 STKSLSTASNPTNSLAFLGG-------ILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
           S+    T  N    L+F  G       +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N
Sbjct: 426 SSPEKLTGLN----LSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNN 481

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
           +DAYSAA++K G  + PG R   F GSQ+I+PL HTIEHEE LEVI+LEG     EDA +
Sbjct: 482 IDAYSAAAVKVGPCSLPGSRVGSF-GSQVILPLAHTIEHEEFLEVIKLEGVGHCPEDAMM 540

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS-KTPDTPDT 596
            RD+ LLQ+CSG+DENAVG C+EL+FAPID  F DD PLLPSGFRIIPLDS K   +P+ 
Sbjct: 541 PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPN- 599

Query: 597 LTAHRTLDLTSSLEVGPATNPAAGDSS-SCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
               RTLDL S+LE+GPA N ++ D S +  +TRSV+TIAF+F FES+LQ+NVA+MARQY
Sbjct: 600 ----RTLDLASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFAFESHLQENVASMARQY 655

Query: 656 VRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSV 715
           VRS+ISSVQRVA+A+ PS LS   G +   G+PEA TLA WI  SY  +LG ELL+S   
Sbjct: 656 VRSIISSVQRVALALSPSHLSSHAGLRPPLGTPEAHTLARWISHSYRCYLGVELLKSSGE 715

Query: 716 GGDSVLKNLWQHSDAILCCSLK 737
           G +++LK LW  SDAI+CCSLK
Sbjct: 716 GSETILKTLWHLSDAIMCCSLK 737


>gi|225442501|ref|XP_002284003.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 1
           [Vitis vinifera]
          Length = 837

 Score =  993 bits (2567), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/742 (67%), Positives = 580/742 (78%), Gaps = 37/742 (4%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K  +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 9   KGIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 68

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TAPATT 140
           RCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +Q  + T  AT 
Sbjct: 69  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLATK 128

Query: 141 DASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP 194
           D SC+SVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKP
Sbjct: 129 DTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKP 187

Query: 195 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNA 254
           GPDS+GI AIS  C+GVAARACGLV LEPT++AEILKDRPSWFRDCR+++V  + P  N 
Sbjct: 188 GPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANG 247

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           GTIELLY Q YAPTTLAPARDFW LRYT+ +++GSLVVCERSL  +  GP+      FVR
Sbjct: 248 GTIELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQHFVR 307

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ 368
           AEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+ T+A      
Sbjct: 308 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLR 367

Query: 369 ----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
               E S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GWS+M  DG +DV I VN
Sbjct: 368 QIAQEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGIDDVTILVN 427

Query: 425 STKSLSTASNPTNSLAFLGG-------ILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
           S+    T  N    L+F  G       +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N
Sbjct: 428 SSPEKLTGLN----LSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNN 483

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
           +DAYSAA++K G  + PG R   F GSQ+I+PL HTIEHEE LEVI+LEG     EDA +
Sbjct: 484 IDAYSAAAVKVGPCSLPGSRVGSF-GSQVILPLAHTIEHEEFLEVIKLEGVGHCPEDAMM 542

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS-KTPDTPDT 596
            RD+ LLQ+CSG+DENAVG C+EL+FAPID  F DD PLLPSGFRIIPLDS K   +P+ 
Sbjct: 543 PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPN- 601

Query: 597 LTAHRTLDLTSSLEVGPATNPAAGDSS-SCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
               RTLDL S+LE+GPA N ++ D S +  +TRSV+TIAF+F FES+LQ+NVA+MARQY
Sbjct: 602 ----RTLDLASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFAFESHLQENVASMARQY 657

Query: 656 VRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSV 715
           VRS+ISSVQRVA+A+ PS LS   G +   G+PEA TLA WI  SY  +LG ELL+S   
Sbjct: 658 VRSIISSVQRVALALSPSHLSSHAGLRPPLGTPEAHTLARWISHSYRCYLGVELLKSSGE 717

Query: 716 GGDSVLKNLWQHSDAILCCSLK 737
           G +++LK LW  SDAI+CCSLK
Sbjct: 718 GSETILKTLWHLSDAIMCCSLK 739


>gi|444436435|gb|AGE09585.1| HB1-like protein [Eucalyptus cladocalyx]
          Length = 844

 Score =  991 bits (2563), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/743 (67%), Positives = 581/743 (78%), Gaps = 33/743 (4%)

Query: 19  SINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 78
           S + + LDNGKYVRYT EQVEALER+Y ECPKPSSLRRQQLIRECPILSNIEPKQIKVWF
Sbjct: 13  SNSSNSLDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 72

Query: 79  QNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TAP 137
           QNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +Q  + T  
Sbjct: 73  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTL 132

Query: 138 ATTDASCDSVVTTPQHSL------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           AT D SC+SVVT+ QH L      RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPG
Sbjct: 133 ATKDTSCESVVTSGQHQLTSQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPG 191

Query: 192 MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA 251
           MKPGPDS+GI AIS  C+GVAARACGLV LEPT++AEILKDRPSWFRDCR+++V  + P 
Sbjct: 192 MKPGPDSIGIVAISHGCAGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPT 251

Query: 252 GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQ 311
            N GTIELLY Q YAPTTLAPARDFW LRYT+ L++GSLVVCERSL  +  GP+      
Sbjct: 252 ANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNTQNGPSMPPVQP 311

Query: 312 FVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--- 368
           FVRAEMLPSG L+RPC+GGGSII IVDHL+LE WSVPEVLRPLYESS ++AQ+ T+A   
Sbjct: 312 FVRAEMLPSGYLVRPCEGGGSIIRIVDHLDLEPWSVPEVLRPLYESSTMLAQKTTMAALR 371

Query: 369 -------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVII 421
                  E S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GWS+M  DG +DV I
Sbjct: 372 QLRQIAQEVSQPNVSGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSIMGNDGIDDVTI 431

Query: 422 AVNSTKSLSTASNPTNSLAF---LGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNV 478
            VNS+       N + S  F      +LCA+ASMLLQNVPPA+L+RFLREHRSEWAD ++
Sbjct: 432 LVNSSPDKLMGLNLSFSNGFPAVSNAVLCARASMLLQNVPPAVLLRFLREHRSEWADNSI 491

Query: 479 DAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVS 538
           DAYSAA++K GS A PG R   F G Q+I+PL HTIEHEE LEVI+LEG   + EDA + 
Sbjct: 492 DAYSAAAVKVGSCALPGSRIGSF-GGQVILPLAHTIEHEEFLEVIKLEGMGHSPEDALMP 550

Query: 539 RDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS-KTPDTPDTL 597
           RDI  LQ+CSGVDENAVG  +EL+FAPID  F DD PLLPSGFRIIPLDS K   +P+  
Sbjct: 551 RDIFFLQMCSGVDENAVGTFAELIFAPIDASFADDAPLLPSGFRIIPLDSVKEASSPN-- 608

Query: 598 TAHRTLDLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
              RTLDL SSLE+GPA N +  D   +S C  TRSV+TIAF+F FES++Q++VA+MARQ
Sbjct: 609 ---RTLDLASSLEIGPAGNRSFNDINANSGC--TRSVMTIAFEFAFESHMQEHVASMARQ 663

Query: 655 YVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS 714
           YVRS+ISSVQRVA+A+ PS L    G +   G+PEA TLA WIC SY  +LG +LL+S +
Sbjct: 664 YVRSIISSVQRVALALSPSNLGSHAGLRTPLGTPEAQTLARWICHSYRCYLGVDLLKSSN 723

Query: 715 VGGDSVLKNLWQHSDAILCCSLK 737
            G +S+LKNLW HSDAI+CCSLK
Sbjct: 724 EGSESILKNLWHHSDAIMCCSLK 746


>gi|6634772|gb|AAF19752.1|AC009917_11 Strong similarity to gb|Y10922 HD-Zip protein from Arabidopsis
           thaliana, containing START PF|01852, bZIP transcription
           factor PF|00170, and homeobox PF|00046 domains. ESTs
           gb|F20019, gb|Z46707, gb|Z46706, gb|F20018 come from
           this gene [Arabidopsis thaliana]
          Length = 840

 Score =  991 bits (2561), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/738 (67%), Positives = 578/738 (78%), Gaps = 38/738 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
            D+GKYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPIL NIEP+QIKVWFQNRRCR
Sbjct: 16  FDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCR 75

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT-DAS 143
           EKQRKE++RLQTVNRKL+AMNKLLMEENDRLQKQVS LV ENG+MK ++ TA  TT D S
Sbjct: 76  EKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVYENGFMKHRIHTASGTTTDNS 135

Query: 144 CDSVVT----------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           C+SVV           T QH  RD NNPA LLSIAEETLAEFL KATGTAVDWVQM GMK
Sbjct: 136 CESVVVSGQQRQQQNPTHQHPQRDVNNPANLLSIAEETLAEFLCKATGTAVDWVQMIGMK 195

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDS+GI A+S++CSG+AARACGLVSLEP K+AEILKDRPSWFRDCR +E   + P GN
Sbjct: 196 PGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRPSWFRDCRCVETLNVIPTGN 255

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+ TQ YAPTTLA ARDFWTLRY+T+L++GS VVCERSL+ +  GPN   ++ FV
Sbjct: 256 GGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGPLSSSFV 315

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RA+ML SG LIRPCDGGGSIIHIVDH++L+  SVPEVLRPLYESSK++AQ+MT+A     
Sbjct: 316 RAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALRHV 375

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEV Y  GRQPAVLRTFSQRL RGFNDAVNGF DDGWS M+ DG ED+ I +
Sbjct: 376 RQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMSSDGGEDITIMI 435

Query: 424 NSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           NS+ +    S   +S   +F  G+LCAKASMLLQNVPP +L+RFLREHR+EWAD+ VDAY
Sbjct: 436 NSSSAKFAGSQYGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLREHRAEWADYGVDAY 495

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
           SAASL+A  YA P +R   F  +Q+I+PL  T+EHEE LEV+RL GH+ + ED  +SRD+
Sbjct: 496 SAASLRATPYAVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLGGHAYSPEDMGLSRDM 555

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
           +LLQ+CSGVDEN VG C++LVFAPIDE F DD PLLPSGFR+IPLD KT +  D  +A R
Sbjct: 556 YLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPLDQKT-NPNDHQSASR 614

Query: 602 TLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           T DL SSL+    T+       S  ++R VLTIAFQF F+++ +DNVATMARQYVR+V+ 
Sbjct: 615 TRDLASSLDGSTKTD-------SETNSRLVLTIAFQFTFDNHSRDNVATMARQYVRNVVG 667

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSD--SVGGDS 719
           S+QRVA+AI P   S  L     P SPEALTL  WI +SYS H GA+L  +D  S GGD+
Sbjct: 668 SIQRVALAITPRPGSMQL-----PTSPEALTLVRWITRSYSIHTGADLFGADSQSCGGDT 722

Query: 720 VLKNLWQHSDAILCCSLK 737
           +LK LW HSDAILCCSLK
Sbjct: 723 LLKQLWDHSDAILCCSLK 740


>gi|15220758|ref|NP_174337.1| homeobox-leucine zipper protein ATHB-9 [Arabidopsis thaliana]
 gi|75096987|sp|O04292.1|ATBH9_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-9; AltName:
           Full=HD-ZIP protein ATHB-9; AltName: Full=Homeodomain
           transcription factor ATHB-9; AltName: Full=Protein
           PHAVOLUTA
 gi|2145358|emb|CAA71854.1| HD-Zip protein [Arabidopsis thaliana]
 gi|20069421|emb|CAD29544.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|110741482|dbj|BAE98697.1| HD-Zip protein [Arabidopsis thaliana]
 gi|332193111|gb|AEE31232.1| homeobox-leucine zipper protein ATHB-9 [Arabidopsis thaliana]
          Length = 841

 Score =  990 bits (2560), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/738 (67%), Positives = 578/738 (78%), Gaps = 38/738 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
            D+GKYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPIL NIEP+QIKVWFQNRRCR
Sbjct: 17  FDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCR 76

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT-DAS 143
           EKQRKE++RLQTVNRKL+AMNKLLMEENDRLQKQVS LV ENG+MK ++ TA  TT D S
Sbjct: 77  EKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVYENGFMKHRIHTASGTTTDNS 136

Query: 144 CDSVVT----------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           C+SVV           T QH  RD NNPA LLSIAEETLAEFL KATGTAVDWVQM GMK
Sbjct: 137 CESVVVSGQQRQQQNPTHQHPQRDVNNPANLLSIAEETLAEFLCKATGTAVDWVQMIGMK 196

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDS+GI A+S++CSG+AARACGLVSLEP K+AEILKDRPSWFRDCR +E   + P GN
Sbjct: 197 PGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRPSWFRDCRCVETLNVIPTGN 256

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+ TQ YAPTTLA ARDFWTLRY+T+L++GS VVCERSL+ +  GPN   ++ FV
Sbjct: 257 GGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGPLSSSFV 316

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RA+ML SG LIRPCDGGGSIIHIVDH++L+  SVPEVLRPLYESSK++AQ+MT+A     
Sbjct: 317 RAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALRHV 376

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEV Y  GRQPAVLRTFSQRL RGFNDAVNGF DDGWS M+ DG ED+ I +
Sbjct: 377 RQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMSSDGGEDITIMI 436

Query: 424 NSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           NS+ +    S   +S   +F  G+LCAKASMLLQNVPP +L+RFLREHR+EWAD+ VDAY
Sbjct: 437 NSSSAKFAGSQYGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLREHRAEWADYGVDAY 496

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
           SAASL+A  YA P +R   F  +Q+I+PL  T+EHEE LEV+RL GH+ + ED  +SRD+
Sbjct: 497 SAASLRATPYAVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLGGHAYSPEDMGLSRDM 556

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
           +LLQ+CSGVDEN VG C++LVFAPIDE F DD PLLPSGFR+IPLD KT +  D  +A R
Sbjct: 557 YLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPLDQKT-NPNDHQSASR 615

Query: 602 TLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           T DL SSL+    T+       S  ++R VLTIAFQF F+++ +DNVATMARQYVR+V+ 
Sbjct: 616 TRDLASSLDGSTKTD-------SETNSRLVLTIAFQFTFDNHSRDNVATMARQYVRNVVG 668

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSD--SVGGDS 719
           S+QRVA+AI P   S  L     P SPEALTL  WI +SYS H GA+L  +D  S GGD+
Sbjct: 669 SIQRVALAITPRPGSMQL-----PTSPEALTLVRWITRSYSIHTGADLFGADSQSCGGDT 723

Query: 720 VLKNLWQHSDAILCCSLK 737
           +LK LW HSDAILCCSLK
Sbjct: 724 LLKQLWDHSDAILCCSLK 741


>gi|297851492|ref|XP_002893627.1| hypothetical protein ARALYDRAFT_473277 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339469|gb|EFH69886.1| hypothetical protein ARALYDRAFT_473277 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 840

 Score =  990 bits (2560), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/738 (67%), Positives = 579/738 (78%), Gaps = 38/738 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
            D+GKYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPIL NIEP+QIKVWFQNRRCR
Sbjct: 16  FDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCR 75

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT-DAS 143
           EKQRKE++RLQTVNRKL+AMNKLLMEENDRLQKQVS LV ENG+MK ++ TA  TT D S
Sbjct: 76  EKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVYENGFMKHRIHTASGTTTDNS 135

Query: 144 CDSVVT----------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           C+SVV           T QH  RDANNPA LLSIAEETLAEFL KATGTAVDWVQM GMK
Sbjct: 136 CESVVVIGQQRQQQNPTHQHPQRDANNPANLLSIAEETLAEFLCKATGTAVDWVQMIGMK 195

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDS+GI A+S++CSG+AARACGLVSLEP K+AEILKDRPSWFRDCR +E   + P GN
Sbjct: 196 PGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRPSWFRDCRCVETLNVIPTGN 255

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+ TQ YAPTTLA ARDFWTLRY+T+L++GS VVCERSL+ +  GPN   ++ FV
Sbjct: 256 GGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGPLSSSFV 315

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RA+ML SG LIRPCDGGGSIIHIVDH++L+  SVPEVLRPLYESSK++AQ+MT+A     
Sbjct: 316 RAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALRHV 375

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEV Y  GRQPAVLRTFSQRL RGFNDAVNGF DDGWS M+ DGAED+ I +
Sbjct: 376 RQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMSSDGAEDITIMI 435

Query: 424 NSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           NS+ +    S   +S   +F  G+LCAKASMLLQNVPP +L+RFLREHR+EWAD+ VDAY
Sbjct: 436 NSSSAKFAGSQYGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLREHRAEWADYGVDAY 495

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
           SAASL+A  +  P +R   F  +Q+I+PL  T+EHEE LEV+RL GH+ + ED  +SRD+
Sbjct: 496 SAASLRATPFTVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLGGHAYSPEDMGLSRDM 555

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
           +LLQ+CSGVDEN VG C++LVFAPIDE F DD PLLPSGFR+IPLD KT +  D  +A R
Sbjct: 556 YLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPLDQKT-NPNDHQSASR 614

Query: 602 TLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           T DL SSL+    T+       S  ++R VLTIAFQF F+++ +DNVATMARQYVR+V+ 
Sbjct: 615 TRDLASSLDGSTKTD-------SETNSRLVLTIAFQFTFDNHSRDNVATMARQYVRNVVG 667

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSD--SVGGDS 719
           S+QRVA+AI P   S  L     P SPEALTL  WI +SYS H GA+L  +D  S GGD+
Sbjct: 668 SIQRVALAITPRPGSMQL-----PTSPEALTLVRWITRSYSIHTGADLFGADSQSCGGDT 722

Query: 720 VLKNLWQHSDAILCCSLK 737
           +LK LW HSDAILCCSLK
Sbjct: 723 LLKQLWNHSDAILCCSLK 740


>gi|219879370|gb|ACL51017.1| class III HD-Zip protein 8 [Citrus trifoliata]
          Length = 829

 Score =  988 bits (2554), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/739 (66%), Positives = 581/739 (78%), Gaps = 34/739 (4%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ+RRCR
Sbjct: 1   MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQDRRCR 60

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--ATTDA 142
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN + +QQ + A   ATTD 
Sbjct: 61  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 120

Query: 143 SCDSVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           SC+SV T+ QH L          RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGM
Sbjct: 121 SCESVATSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 179

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI AIS  C+GVAARACGLV L+PT++AEILKDRPSW+RDCRS+EV  + P G
Sbjct: 180 KPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTG 239

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           ++GTIELLY Q YAPTTLAPARDFW LRYT+ L++GSLVVCERSL+ +  GP+   A  F
Sbjct: 240 SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHF 299

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS ++AQ+ T+A    
Sbjct: 300 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH 359

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GWS++  DG +DV + 
Sbjct: 360 LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 419

Query: 423 VNS--TKSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD 479
           VNS  +K +    +  N    +   +LCAKASMLLQ+VPPA+L+RFLREHRSEWAD ++D
Sbjct: 420 VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSID 479

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
           AYSAA++KAG  + P  R   F G Q+I+PL HTIEHEE LEVI+LE  +  +ED  +  
Sbjct: 480 AYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 538

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           DI LLQ+CSGVDENAVG C+ELVFAPID  F DD P++PSGFRIIPLDS      DT + 
Sbjct: 539 DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGK----DTPSP 594

Query: 600 HRTLDLTSSLEVGPATNPAAGDSSS-CHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
           +RTLDL S+LEVGP  N A+GDSS+ C   +SV+TIAFQF FE +LQ+NVA+MARQYVR 
Sbjct: 595 NRTLDLASALEVGPTGNKASGDSSTQCGSKKSVITIAFQFAFEMHLQENVASMARQYVRG 654

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           +I+SVQRVA+A+ PS      G +  PGSPEA TLA WICQSY  +LGAELL+ +  G +
Sbjct: 655 IIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKCE--GNE 712

Query: 719 SVLKNLWQHSDAILCCSLK 737
           S+LK LW HSDA+LCCSLK
Sbjct: 713 SILKTLWHHSDAVLCCSLK 731


>gi|312282957|dbj|BAJ34344.1| unnamed protein product [Thellungiella halophila]
          Length = 844

 Score =  987 bits (2552), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/739 (66%), Positives = 582/739 (78%), Gaps = 40/739 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
            D+GKYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPIL NIEP+QIKVWFQNRRCR
Sbjct: 20  FDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCR 79

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT-DAS 143
           EKQRKE++RLQTVNRKL+AMNKLLMEENDRLQKQVS LV ENG+MK ++ TA  TT D S
Sbjct: 80  EKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGFMKHRIHTASGTTTDNS 139

Query: 144 CDSVVT----------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           C+SVV           T QH  RDANNPAGLLSIAEETLAEFL KATGTAVDWVQM GMK
Sbjct: 140 CESVVVSGQQRQQQNPTHQHPQRDANNPAGLLSIAEETLAEFLCKATGTAVDWVQMIGMK 199

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDS+GI A+S++CSG+AARACGLVSLEP K+ EILKDRPSWFRDCR +E  ++ P GN
Sbjct: 200 PGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVVEILKDRPSWFRDCRCVETLSVIPTGN 259

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+ TQ YAPTTLA ARDFWTLRY+T+L++GS VVCE+SL+ +  GPN   ++ FV
Sbjct: 260 GGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCEKSLTSATGGPNGPLSSSFV 319

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RA+ML SG LIRPCDGGGSIIHIVDH++L+  SVPEVLRPLYESSK++AQ+MT+A     
Sbjct: 320 RAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALRHV 379

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEV Y  GRQPAVLRTFSQRL RGFNDAVNGF DDGWS M+ DG ED+ I +
Sbjct: 380 RQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFADDGWSPMSSDGGEDITIMI 439

Query: 424 NSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           NS+ +    S   NS   +F  G+LCAKASMLLQNVPP +L+RFLREHR+EWAD+ VDAY
Sbjct: 440 NSSSAKFAGSQYGNSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLREHRAEWADYGVDAY 499

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
           SAASL+A  +A P +R   F  +Q+I+PL  T+EHEE LEV+RL GH+ + ED  +SRD+
Sbjct: 500 SAASLRATPFAVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLGGHAYSPEDMGLSRDM 559

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTP-DTLTAH 600
           +LLQ+CSGVDEN VG C++LVFAPIDE F DD PLLPSGFR+IPL+ KT  TP D ++A+
Sbjct: 560 YLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPLEQKT--TPSDHVSAN 617

Query: 601 RTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVI 660
           RT DL SSL+    T+       S  ++R VLTIAFQF F+++ +DNVATMARQYVR+V+
Sbjct: 618 RTRDLASSLDGSTKTD-------SETNSRLVLTIAFQFTFDNHSRDNVATMARQYVRNVV 670

Query: 661 SSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS--VGGD 718
            S+QRVA+AI P   S  L     P SPEALTL  WI +SYS H GA LL ++S    GD
Sbjct: 671 GSIQRVALAITPRPGSMQL-----PTSPEALTLVRWISRSYSIHTGANLLGAESQACDGD 725

Query: 719 SVLKNLWQHSDAILCCSLK 737
           ++LK LW H+DAILCCSLK
Sbjct: 726 TLLKQLWNHADAILCCSLK 744


>gi|383930759|gb|AFH56718.1| class III HD-Zip protein 8 [Prunus persica]
          Length = 840

 Score =  987 bits (2551), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/737 (67%), Positives = 581/737 (78%), Gaps = 29/737 (3%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K Q+DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 14  KMQMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 73

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TAPATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV EN Y +QQ + T  ATT
Sbjct: 74  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYFRQQTQNTNLATT 133

Query: 141 DASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP 194
           D SC+SVVT      TPQH  RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKP
Sbjct: 134 DTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKP 192

Query: 195 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNA 254
           GPDS+GI AIS  C+GVAARACGLV LEPT++AEILKDRPSWFR+CRS++V  +   GN 
Sbjct: 193 GPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRNCRSVDVLNVLSTGNG 252

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           GTIELLY Q YAPTTLAPARDFW LRYT+ L++GSLVVCERSL+ +  GP+      FVR
Sbjct: 253 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVR 312

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ 368
           AEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS ++AQ+ T+A      
Sbjct: 313 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALRNLR 372

Query: 369 ----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
               E S     G GR+PA LR  SQRLS+GFN+AVNGF D+GWS++  DG +DV + VN
Sbjct: 373 QISQEVSQPNAAGWGRRPAALRALSQRLSKGFNEAVNGFTDEGWSILESDGVDDVTLLVN 432

Query: 425 STKSLSTASN--PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYS 482
           S+      +N       +    +LCAKASMLLQNVPPA+L+RFLREHRSEWAD ++DAYS
Sbjct: 433 SSPGKMMGANLYANGVPSMSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADRSIDAYS 492

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV-SRDI 541
           AA++K G     G R   F G Q+I PL HTIEHEE +EVI++E     +ED  + + DI
Sbjct: 493 AAAIKPGPCGLLGSRAGGF-GDQVIHPLAHTIEHEEFMEVIKIENMGHYREDMIMPAADI 551

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
            LLQ+CSGVDEN+VG C+ELVFAPID  F DDGP+LPSGFRIIPLDS+     D  + +R
Sbjct: 552 FLLQLCSGVDENSVGTCAELVFAPIDASFSDDGPILPSGFRIIPLDSRM----DAPSPNR 607

Query: 602 TLDLTSSLEVGPATNPAAGDSSS-CHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVI 660
           TLDL S+LEVGPA + A+GD++    +T+SV+TIAFQF FE +LQDNVA+MARQYVRS+I
Sbjct: 608 TLDLASALEVGPAGSRASGDNAGHSGNTKSVMTIAFQFAFEIHLQDNVASMARQYVRSII 667

Query: 661 SSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSV 720
           +SVQRVA+A+ PS      G +  PG+PEA TLA WICQSY  +LG +LL+S+  G +S+
Sbjct: 668 ASVQRVALALSPSRFGSNSGFRPPPGTPEAQTLAGWICQSYRCYLGGDLLKSE--GSESI 725

Query: 721 LKNLWQHSDAILCCSLK 737
           LK+LW HSDAILCCSLK
Sbjct: 726 LKSLWHHSDAILCCSLK 742


>gi|225442505|ref|XP_002284009.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 2
           [Vitis vinifera]
          Length = 832

 Score =  986 bits (2550), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/745 (67%), Positives = 579/745 (77%), Gaps = 43/745 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 1   MDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 60

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TAPATTDAS 143
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +Q  + T  AT D S
Sbjct: 61  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLATKDTS 120

Query: 144 CDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
           C+SVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 121 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 179

Query: 198 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTI 257
           S+GI AIS  C+GVAARACGLV LEPT++AEILKDRPSWFRDCR+++V  + P  N GTI
Sbjct: 180 SIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANGGTI 239

Query: 258 ELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEM 317
           ELLY Q YAPTTLAPARDFW LRYT+ +++GSLVVCERSL  +  GP+      FVRAEM
Sbjct: 240 ELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQHFVRAEM 299

Query: 318 LPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------- 368
           LPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+ T+A         
Sbjct: 300 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQIA 359

Query: 369 -ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
            E S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GWS+M  DG +DV I VNS+ 
Sbjct: 360 QEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGIDDVTILVNSSP 419

Query: 428 SLSTASNPTNSLAFLGG-------ILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDA 480
              T  N    L+F  G       +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+DA
Sbjct: 420 EKLTGLN----LSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDA 475

Query: 481 YSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEE------LLEVIRLEGHSLAQED 534
           YSAA++K G  + PG R   F GSQ+I+PL HTIEHEE       LEVI+LEG     ED
Sbjct: 476 YSAAAVKVGPCSLPGSRVGSF-GSQVILPLAHTIEHEEASNLFIFLEVIKLEGVGHCPED 534

Query: 535 AFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS-KTPDT 593
           A + RD+ LLQ+CSG+DENAVG C+EL+FAPID  F DD PLLPSGFRIIPLDS K   +
Sbjct: 535 AMMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASS 594

Query: 594 PDTLTAHRTLDLTSSLEVGPATNPAAGDSS-SCHHTRSVLTIAFQFPFESNLQDNVATMA 652
           P+     RTLDL S+LE+GPA N ++ D S +  +TRSV+TIAF+F FES+LQ+NVA+MA
Sbjct: 595 PN-----RTLDLASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFAFESHLQENVASMA 649

Query: 653 RQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRS 712
           RQYVRS+ISSVQRVA+A+ PS LS   G +   G+PEA TLA WI  SY  +LG ELL+S
Sbjct: 650 RQYVRSIISSVQRVALALSPSHLSSHAGLRPPLGTPEAHTLARWISHSYRCYLGVELLKS 709

Query: 713 DSVGGDSVLKNLWQHSDAILCCSLK 737
              G +++LK LW  SDAI+CCSLK
Sbjct: 710 SGEGSETILKTLWHLSDAIMCCSLK 734


>gi|359476025|ref|XP_002283717.2| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Vitis
           vinifera]
 gi|296081833|emb|CBI20838.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  984 bits (2544), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/746 (66%), Positives = 580/746 (77%), Gaps = 31/746 (4%)

Query: 15  SSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQI 74
           SSS    K  LDNGKYVRYT EQVEALER+Y +CPKPSSLRRQQLIRECPILSNIEPKQI
Sbjct: 4   SSSCKDAKMALDNGKYVRYTPEQVEALERLYHDCPKPSSLRRQQLIRECPILSNIEPKQI 63

Query: 75  KVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR 134
           KVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN + +QQ +
Sbjct: 64  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTQ 123

Query: 135 TAP-ATTDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWV 187
            A  ATTD SC+SVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WV
Sbjct: 124 NATLATTDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWV 182

Query: 188 QMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFT 247
           QMPGMKPGPDS+GI AIS  C+GVAARACGLVSLEPT++AEILKD PSW+R+CR+++V  
Sbjct: 183 QMPGMKPGPDSIGIVAISHGCTGVAARACGLVSLEPTRVAEILKDWPSWYRECRNVDVLN 242

Query: 248 MFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA 307
           +   GN GTIELLY Q YAPTTLAPARDFW LRYT+ L++GSLVVCERSL+ +  GP+  
Sbjct: 243 VLSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP 302

Query: 308 SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI 367
               FVRAE LPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS ++AQ+ T+
Sbjct: 303 PVQYFVRAEKLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTM 362

Query: 368 A----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAE 417
           A          E S     G GR+PA LR   QRL++GFN+AVNGF D+GWS+M  DG +
Sbjct: 363 AALRQLRQISQEVSQPTNTGWGRRPAALRALGQRLTKGFNEAVNGFTDEGWSMMESDGID 422

Query: 418 DVIIAVNSTKSLSTASNPTNSLAF---LGGILCAKASMLLQNVPPALLVRFLREHRSEWA 474
           DV + VNS+ +     N + +  F      +LCAKASMLLQNVPPA+L+RFLREHRSEWA
Sbjct: 423 DVTLLVNSSPAKMMGVNLSYASGFPSMSNAVLCAKASMLLQNVPPAILLRFLREHRSEWA 482

Query: 475 DFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQED 534
           D ++DAYSAA++KAG    P  R   + G Q+I+PL HTIEHEE +EVI+LE     +ED
Sbjct: 483 DSSIDAYSAAAVKAGPCTLPVSRAGGY-GGQVILPLAHTIEHEEFMEVIKLENVDHYRED 541

Query: 535 AFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTP 594
             +S D+ LLQ+CSGVD+NAVG CSEL+FAPID  F DD PLLPSGFRIIPLDS      
Sbjct: 542 LMMSGDVFLLQLCSGVDDNAVGTCSELIFAPIDASFSDDAPLLPSGFRIIPLDSGV---- 597

Query: 595 DTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHT---RSVLTIAFQFPFESNLQDNVATM 651
           D  + +RTLDL SSLEVGPA N A+ D+S   HT   +SV+TI+FQF FE +LQ+NVA+M
Sbjct: 598 DGSSPNRTLDLASSLEVGPAGNKASSDNSG--HTGSAKSVMTISFQFAFEMHLQENVASM 655

Query: 652 ARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLR 711
           ARQYVRS+ISSVQRVA+A+ PS   P +G +  PG+PEA TLA WICQSY  +LG ELL+
Sbjct: 656 ARQYVRSIISSVQRVALALSPSRFGPQMGFRPLPGTPEAHTLARWICQSYRCYLGVELLK 715

Query: 712 SDSVGGDSVLKNLWQHSDAILCCSLK 737
             + G +S+LK LW HSDA++CCSLK
Sbjct: 716 PSNEGNESILKTLWHHSDAVMCCSLK 741


>gi|206572107|gb|ACI13686.1| putative HB8 HD-ZipIII [Malus x domestica]
          Length = 844

 Score =  984 bits (2544), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/741 (66%), Positives = 586/741 (79%), Gaps = 33/741 (4%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K Q+DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 14  KMQMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 73

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV EN Y +QQ + A  ATT
Sbjct: 74  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYFRQQTQNATLATT 133

Query: 141 DASCDSVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMP 190
           D SCDSVVT+ QH L          RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQ+P
Sbjct: 134 DTSCDSVVTSGQHHLTPQQHPPPPPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQLP 192

Query: 191 GMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFP 250
           GMKPGPDS+GI AIS  C+GVAARACGLV L+PT++AEILKDRPSWFR+CRS++V  +  
Sbjct: 193 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWFRNCRSVDVLNVLS 252

Query: 251 AGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAA 310
            GN GTIELLY Q YAPTTLAPARDFW LRYT+ L++GSLVVCERSL+ +  GP+     
Sbjct: 253 TGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQ 312

Query: 311 QFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-- 368
            FVRAEMLPSG LIRPC+GGGSI+HIVDH++LE WSVPEVLRPLYESS ++AQ+ T+A  
Sbjct: 313 NFVRAEMLPSGYLIRPCEGGGSILHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAAL 372

Query: 369 --------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI 420
                   E S     G GR+PA LR  SQRLS+GFN+AVNGF D+GWS++  DG +DV 
Sbjct: 373 RNLRQISQEVSQPNSAGWGRRPAALRALSQRLSKGFNEAVNGFTDEGWSVLESDGVDDVT 432

Query: 421 IAVNSTKSLSTASN-PTNSLAFLG-GILCAKASMLLQNVPPALLVRFLREHRSEWADFNV 478
           + VNS+     ++N  TN +  +   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD ++
Sbjct: 433 LLVNSSPGKMMSANLYTNGVPSMSTAVLCAKASMLLQNVPPAILLRFLREHRSEWADRSI 492

Query: 479 DAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV- 537
           DAYSAA++KAG     G R   F G Q+I+PL HTIEHEE +EVI++E     +ED  + 
Sbjct: 493 DAYSAAAIKAGPCNMLGPRAGSF-GDQVILPLAHTIEHEEFMEVIKIENMGHYREDMMMP 551

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTL 597
           + DI LLQ+CSGVDENAVG C+ELVFAPID  F DD P+LPSGFRIIPLDS+     DT 
Sbjct: 552 AADIFLLQLCSGVDENAVGTCAELVFAPIDASFSDDAPILPSGFRIIPLDSRM----DTP 607

Query: 598 TAHRTLDLTSSLEVGPATNPAAGDSSS-CHHTRSVLTIAFQFPFESNLQDNVATMARQYV 656
           + +RTLDL S+LEVGPA + A+GD++    +T+SV+TIAFQF FE +LQ+N+A MARQYV
Sbjct: 608 SPNRTLDLASALEVGPAGSRASGDNAGHSGNTKSVMTIAFQFAFEIHLQENIAAMARQYV 667

Query: 657 RSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVG 716
           RS+I+SVQRVA+A+ PS      G +  PG+PEA TLA WICQSY  +LG ELL+++  G
Sbjct: 668 RSIIASVQRVALALSPSHFGSHAGFRPPPGTPEAQTLAGWICQSYRCYLGGELLKTE--G 725

Query: 717 GDSVLKNLWQHSDAILCCSLK 737
            +S+LK+LW HSDAILCCSLK
Sbjct: 726 SESILKSLWHHSDAILCCSLK 746


>gi|225442503|ref|XP_002284014.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 3
           [Vitis vinifera]
          Length = 854

 Score =  983 bits (2540), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/759 (66%), Positives = 580/759 (76%), Gaps = 54/759 (7%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K  +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 9   KGIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 68

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TAPATT 140
           RCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +Q  + T  AT 
Sbjct: 69  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLATK 128

Query: 141 DASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP 194
           D SC+SVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKP
Sbjct: 129 DTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKP 187

Query: 195 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNA 254
           GPDS+GI AIS  C+GVAARACGLV LEPT++AEILKDRPSWFRDCR+++V  + P  N 
Sbjct: 188 GPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANG 247

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           GTIELLY Q YAPTTLAPARDFW LRYT+ +++GSLVVCERSL  +  GP+      FVR
Sbjct: 248 GTIELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQHFVR 307

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ 368
           AEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+ T+A      
Sbjct: 308 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLR 367

Query: 369 ----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
               E S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GWS+M  DG +DV I VN
Sbjct: 368 QIAQEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGIDDVTILVN 427

Query: 425 STKSLSTASNPTNSLAFLGG-------ILCAKASMLL-----------------QNVPPA 460
           S+    T  N    L+F  G       +LCAKASMLL                 QNVPPA
Sbjct: 428 SSPEKLTGLN----LSFANGFPAVSNAVLCAKASMLLQVSFISCSDVLFTIYHFQNVPPA 483

Query: 461 LLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELL 520
           +L+RFLREHRSEWAD N+DAYSAA++K G  + PG R   F GSQ+I+PL HTIEHEE L
Sbjct: 484 ILLRFLREHRSEWADNNIDAYSAAAVKVGPCSLPGSRVGSF-GSQVILPLAHTIEHEEFL 542

Query: 521 EVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSG 580
           EVI+LEG     EDA + RD+ LLQ+CSG+DENAVG C+EL+FAPID  F DD PLLPSG
Sbjct: 543 EVIKLEGVGHCPEDAMMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSG 602

Query: 581 FRIIPLDS-KTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSS-SCHHTRSVLTIAFQF 638
           FRIIPLDS K   +P+     RTLDL S+LE+GPA N ++ D S +  +TRSV+TIAF+F
Sbjct: 603 FRIIPLDSGKEASSPN-----RTLDLASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEF 657

Query: 639 PFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWIC 698
            FES+LQ+NVA+MARQYVRS+ISSVQRVA+A+ PS LS   G +   G+PEA TLA WI 
Sbjct: 658 AFESHLQENVASMARQYVRSIISSVQRVALALSPSHLSSHAGLRPPLGTPEAHTLARWIS 717

Query: 699 QSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
            SY  +LG ELL+S   G +++LK LW  SDAI+CCSLK
Sbjct: 718 HSYRCYLGVELLKSSGEGSETILKTLWHLSDAIMCCSLK 756


>gi|302190096|dbj|BAJ14107.1| PHABULOSA [Juncus prismatocarpus subsp. leschenaultii]
          Length = 857

 Score =  982 bits (2538), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/762 (65%), Positives = 588/762 (77%), Gaps = 50/762 (6%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D GKYVRYT EQVEALERVY+ECPKPSSL+RQQLIRE P+L NIEPKQIKVWFQNRRCR
Sbjct: 8   MDGGKYVRYTPEQVEALERVYNECPKPSSLKRQQLIRENPLLVNIEPKQIKVWFQNRRCR 67

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--ATTDA 142
           EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL   P  ATTD 
Sbjct: 68  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLHNQPSVATTDN 127

Query: 143 SCDSVVTTPQHSL------------------RDANNPAGLLSIAEETLAEFLSKATGTAV 184
           SCDSVV+  Q S                   RD NNPAGLL+IAEETLAEFLSKATGT+V
Sbjct: 128 SCDSVVSHGQKSQHGQQSQRGQQIALTQNPPRDLNNPAGLLAIAEETLAEFLSKATGTSV 187

Query: 185 DWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLE 244
           +WV + GMKPGPDS+GI A+S +C+GVAARACGLVSLEPTK+AEILKD+ SW+RDCR L+
Sbjct: 188 EWVPLVGMKPGPDSMGIIAVSNNCTGVAARACGLVSLEPTKVAEILKDKMSWYRDCRRLD 247

Query: 245 VFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS-GSGAG 303
           V T+ P GN G IEL+Y Q YAPTT+APARDFWT+RYTT LD+GSLV+CERSL+  +  G
Sbjct: 248 VLTIIPTGNGGNIELIYMQTYAPTTIAPARDFWTVRYTTALDDGSLVICERSLTPTTTGG 307

Query: 304 PNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQ 363
           P   + A FVRAEMLPSG LIRPCDGGGS+IHIVDH++L+AW+VPEV+RPLYES KV+AQ
Sbjct: 308 PVGPTTAGFVRAEMLPSGYLIRPCDGGGSMIHIVDHVDLDAWNVPEVIRPLYESPKVLAQ 367

Query: 364 RMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTC 413
           + TIA          E SGEV +  GRQPAVLRTFSQRLSRGFNDAVNGF DDGWSL+  
Sbjct: 368 KTTIAAMRYIRQIAHELSGEVSFTGGRQPAVLRTFSQRLSRGFNDAVNGFVDDGWSLLGS 427

Query: 414 DGAEDVIIAVNSTKSLSTASNPTNSLAFL----GGILCAKASMLLQNVPPALLVRFLREH 469
           DG++DV +AVNS  S      P  SLA      GGILCAK+SMLLQNVPPALLV+FLREH
Sbjct: 428 DGSDDVSVAVNS--SPDKLLGPHASLALFSSLGGGILCAKSSMLLQNVPPALLVQFLREH 485

Query: 470 RSEWADFNVDAYSAASLKAGS-YAYPGMRPTR-FTGSQIIMPLGHTIEHEELLEVIRLEG 527
           R+EWAD +VD YSAASL++ + +A PG+R       +Q+I+PL HT+E+EELLEV+RLEG
Sbjct: 486 RAEWADCSVDTYSAASLRSNNPFAVPGLRSNNGLWANQVILPLAHTVENEELLEVVRLEG 545

Query: 528 -HSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPL 586
            H   Q++  +SRD++LLQ+C+G+DENA GAC++LVFAPIDE   DD PLL SGFR+ PL
Sbjct: 546 HHGFNQDELVLSRDMYLLQLCNGIDENAPGACAQLVFAPIDESLADDAPLLASGFRLTPL 605

Query: 587 DSKTPDTPDTLTAHRTLDLTSSLEVGPATNPA--AGDSSSCHHTRSVLTIAFQFPFESNL 644
           + K      T    RTLDL S+LE+ P       A DS+S  H+RSVLT+AFQF +E +L
Sbjct: 606 EPKNDGAAQT----RTLDLASTLEIKPCNGSTRHASDSTSASHSRSVLTLAFQFAYEHHL 661

Query: 645 QDNVATMARQYVRSVISSVQRVAMAICPSGLSPTL---GPKLSPGSPEALTLAHWICQSY 701
           +DNVA MARQYVR+V++SVQRVAMAI PS +   +   G K S GSPEA+TL  WI +SY
Sbjct: 662 RDNVAIMARQYVRTVVASVQRVAMAISPSRVGSGVQLGGVKGSNGSPEAVTLVDWIVKSY 721

Query: 702 SYHLGAELLRSD-SVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
             H GAEL+  D    GD++LK LW HSDAI+CCSLK   +F
Sbjct: 722 RVHTGAELINGDCDSNGDALLKLLWHHSDAIVCCSLKASPEF 763


>gi|224074019|ref|XP_002304217.1| predicted protein [Populus trichocarpa]
 gi|60327631|gb|AAX19055.1| class III HD-Zip protein 6 [Populus trichocarpa]
 gi|222841649|gb|EEE79196.1| predicted protein [Populus trichocarpa]
          Length = 837

 Score =  976 bits (2523), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/739 (66%), Positives = 573/739 (77%), Gaps = 38/739 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +DNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 13  MDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATTDAS 143
           EKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV ENGY +Q     P AT D S
Sbjct: 73  EKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYFRQHTHNTPLATKDTS 132

Query: 144 CDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
           C+SVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191

Query: 198 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTI 257
           S GI AIS  C+GV ARACGLV LEPT++AEILKDRPSWFRDCR+++V  + P  N GTI
Sbjct: 192 SSGIVAISHGCAGVGARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANGGTI 251

Query: 258 ELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEM 317
           ELLY Q YAPTTLAP RDFW LRYT+ L++GSLVVCERSL  +  GP+      FVRAEM
Sbjct: 252 ELLYMQLYAPTTLAPGRDFWLLRYTSVLEDGSLVVCERSLKNTQNGPSMPPVQHFVRAEM 311

Query: 318 LPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------- 368
           LPSG L+RPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+ T+          
Sbjct: 312 LPSGYLVRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMVALRQLRQIA 371

Query: 369 -ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
            E S   V   GR+PA LR  SQRLSRGFN+A+NGF+D+GWS++  DG +DV I VNS+ 
Sbjct: 372 QEASQSNVTNWGRRPAALRALSQRLSRGFNEALNGFSDEGWSMIGNDGMDDVTILVNSSP 431

Query: 428 SLSTASNPTNSLAFLGG-------ILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDA 480
                SN    L+F  G       +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+DA
Sbjct: 432 DKLMGSN----LSFTNGFPAVSSAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDA 487

Query: 481 YSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRD 540
           Y+AA++K G ++  G R   F G Q+I+PL HTIEHEE LEVI+LEG   + ED  + RD
Sbjct: 488 YAAAAVKVGPFSLQGSRVGSF-GGQVILPLAHTIEHEEFLEVIKLEGVGHSPEDPIMPRD 546

Query: 541 IHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS-KTPDTPDTLTA 599
           + LLQ+C G+DENAVG C+EL+FAPID  F DD PLLPSGFRIIPLDS K   +P+    
Sbjct: 547 VFLLQLCCGMDENAVGTCAELIFAPIDATFADDAPLLPSGFRIIPLDSGKEASSPN---- 602

Query: 600 HRTLDLTSSLEVGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
            RTLDL ++LEVGPA N A+ D S++   TRSV+TIAF+F FES++Q++VA+M RQY+RS
Sbjct: 603 -RTLDLAAALEVGPAGNRASSDHSANSGCTRSVMTIAFEFAFESHMQEHVASMTRQYIRS 661

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           +ISSVQRVA+A+ P  L    G +   G+PEA TLA WICQSY  +LG ELL+S+  G +
Sbjct: 662 IISSVQRVALALSPH-LGSQAGLRSPLGTPEAQTLARWICQSYRSYLGVELLKSNGEGSE 720

Query: 719 SVLKNLWQHSDAILCCSLK 737
           S+LK LW HSDAI+CCSLK
Sbjct: 721 SILKTLWHHSDAIMCCSLK 739


>gi|226531570|ref|NP_001146215.1| uncharacterized protein LOC100279785 [Zea mays]
 gi|219886211|gb|ACL53480.1| unknown [Zea mays]
 gi|414868944|tpg|DAA47501.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 854

 Score =  976 bits (2523), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/743 (66%), Positives = 582/743 (78%), Gaps = 33/743 (4%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           QLD GKYVRYTAEQV+ALE  Y ECPKPSSLRRQQLIR+C +L+N+EP+QIKVWFQNRRC
Sbjct: 18  QLDAGKYVRYTAEQVDALELAYGECPKPSSLRRQQLIRDCAVLTNVEPRQIKVWFQNRRC 77

Query: 84  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT-APATTDA 142
           REKQR+E+SRLQTVNRKL AMNKLLMEENDRLQKQVS+LV +NGYMK +L + + ATTD 
Sbjct: 78  REKQRRESSRLQTVNRKLGAMNKLLMEENDRLQKQVSRLVFDNGYMKNRLHSPSVATTDT 137

Query: 143 SCDSVVTTPQHSL-----------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           SC+SVVT+ QH             RDANNPAGLL+IAEETLAEF+SKATGTAV+WVQM G
Sbjct: 138 SCESVVTSGQHKQQQNPAVLHPPQRDANNPAGLLAIAEETLAEFMSKATGTAVNWVQMVG 197

Query: 192 MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA 251
           MKPGPDSVGI A+S +CSGVAARACGLVSLEPTK+AEILKDR SW+RDCR +++  + P 
Sbjct: 198 MKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRASWYRDCRRVDILHVIPT 257

Query: 252 GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQ 311
           GN GTIEL+Y Q YA TTLA  RDFWTLRYT+ LD+GSLV+CERSL+ S  GP+      
Sbjct: 258 GNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICERSLTHSTGGPSGPKTPD 317

Query: 312 FVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--- 368
           F+RAE+LPSG LIRPCDGGGS+I+IVDH++L A SVPEVLRPLYES K++AQ+MT A   
Sbjct: 318 FIRAEVLPSGYLIRPCDGGGSMIYIVDHVDLNACSVPEVLRPLYESPKILAQKMTAAALR 377

Query: 369 -------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW-SLMTCDGAEDVI 420
                  E+SGE  YG GRQPAVLRTFSQRLSRGFNDAV+GF DDGW SL++ DGAED+ 
Sbjct: 378 HIRQIAHESSGETPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSSLLSSDGAEDIS 437

Query: 421 IAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
           I +NS+ +    S+ + S  F    GGI+CAKASMLLQNVPPALLVRFLREHRSEWAD  
Sbjct: 438 ITINSSPNKLIGSDVSPSPFFSAMGGGIMCAKASMLLQNVPPALLVRFLREHRSEWADPG 497

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
           VDAYSAASL+A  Y  PG+R   F G+Q+I+PL  T+EHEE LEVIRL+GH  + ++  +
Sbjct: 498 VDAYSAASLRANPYNVPGLRAGGFMGNQVILPLARTVEHEECLEVIRLQGHGFSHDEVLM 557

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTL 597
           S D+ LLQ+CSG+DE+A GAC++LVFAPIDE F DD PLLPSGFR+IPLD+KT    D  
Sbjct: 558 SPDMFLLQLCSGIDEDAPGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKT----DVP 613

Query: 598 TAHRTLDLTSSLEVGPATNPAA-GDS-SSCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
           +A RTLDL S+LEVG      A  DS S    TRSVLTIAFQF FE++L+++VA MARQY
Sbjct: 614 SATRTLDLASALEVGSGGGLCALSDSGSGTRSTRSVLTIAFQFSFENHLRESVAAMARQY 673

Query: 656 VRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSV 715
           VR+V++ VQRVAMAI PS L P +  K  PGSPEAL LA WI +SY  H G E+  SD+ 
Sbjct: 674 VRAVMAIVQRVAMAISPSRLGPHVELKHPPGSPEALALASWIGRSYRAHTGTEIRWSDTE 733

Query: 716 -GGDSVLKNLWQHSDAILCCSLK 737
               S L   W+HSDAI+CCSLK
Sbjct: 734 DAAGSPLTLFWKHSDAIICCSLK 756


>gi|356526089|ref|XP_003531652.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 838

 Score =  975 bits (2521), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/748 (66%), Positives = 583/748 (77%), Gaps = 41/748 (5%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS N   +DNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 6   GSRNGIGMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVW 65

Query: 78  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TA 136
           FQNRRCREKQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +Q  + T 
Sbjct: 66  FQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQITT 125

Query: 137 PATTDASCDSVVTTPQHSL------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMP 190
            AT D +C+SVVT+ QH+L      RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMP
Sbjct: 126 QATKDTNCESVVTSGQHNLTTQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMP 184

Query: 191 GMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFP 250
           GMKPGPDS+GI AIS  C+GVAARACGLV LEPT++AEILKDRP WFRDCR+++V  + P
Sbjct: 185 GMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPLWFRDCRAVDVLNVLP 244

Query: 251 AGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAA 310
             N GTIELLY Q YAPTTLAPARDFW LRYT+ L++GSLV+CERSL  +  GP+     
Sbjct: 245 TANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQ 304

Query: 311 QFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-- 368
            FVRAEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+ T+A  
Sbjct: 305 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL 364

Query: 369 --------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI 420
                   E S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GW+ ++ DG +DV 
Sbjct: 365 RHLRQISHEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTTISNDGVDDVT 424

Query: 421 IAVNSTKSLSTASNPTNSLAFLGG-------ILCAKASMLLQNVPPALLVRFLREHRSEW 473
           I VNS+       N    L+F  G       +LCAKASMLLQNVPPA+L+RFLREHRSEW
Sbjct: 425 ILVNSSPDKLMGLN----LSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 480

Query: 474 ADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQE 533
           AD N+DAY+AA++K G  +  G     F G Q+I+PL HTIEHEE LEVI+LEG + + E
Sbjct: 481 ADNNMDAYTAAAIKVGPCSLSGSCVGNF-GGQVILPLAHTIEHEEFLEVIKLEGIAHSPE 539

Query: 534 DAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS-KTPD 592
           D  + R++ LLQ+CSG+DENAVG C+EL+ APID  F DD PLLPSGFRIIPL+S K   
Sbjct: 540 DTIMPREMFLLQLCSGMDENAVGTCAELISAPIDASFADDAPLLPSGFRIIPLESGKEAS 599

Query: 593 TPDTLTAHRTLDLTSSLEVGPATNPAAGDS---SSCHHTRSVLTIAFQFPFESNLQDNVA 649
           +P+     RTLDL SSL+VGP+ N A+  S   SSC   RSV+TIAF+F FES++Q++V 
Sbjct: 600 SPN-----RTLDLASSLDVGPSGNRASNGSAGNSSC--MRSVMTIAFEFAFESHMQEHVT 652

Query: 650 TMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAEL 709
           +MARQYVRS+ISSVQRVA+A+ PS LS   G +   G+PEA TLAHWIC SY  +LG EL
Sbjct: 653 SMARQYVRSIISSVQRVALALSPSHLSSHAGLRSPLGTPEAQTLAHWICNSYRCYLGVEL 712

Query: 710 LRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           L+S++ G +S+LK+LW HSDAILCC+LK
Sbjct: 713 LKSNNEGNESLLKSLWHHSDAILCCTLK 740


>gi|206572105|gb|ACI13685.1| putative HB15 HD-ZipIII [Malus x domestica]
          Length = 838

 Score =  974 bits (2519), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/743 (66%), Positives = 575/743 (77%), Gaps = 37/743 (4%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           NKH LDNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQN
Sbjct: 9   NKHALDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TAPAT 139
           RRCREKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVS LV ENGY +Q  + T  AT
Sbjct: 69  RRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYFRQHTQGTTLAT 128

Query: 140 TDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
            D SC+SVVT      TPQH  RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMK
Sbjct: 129 KDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMK 187

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDS+GI AIS  C+GVAARACGLV LEPT++AEILKD PSW RDCR+++V  + P  N
Sbjct: 188 PGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDLPSWLRDCRAVDVLNVLPTAN 247

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIELLY Q YAPTTLAPA DFW LRYT+ L++GSLVVC RSL  +  GP       FV
Sbjct: 248 GGTIELLYMQLYAPTTLAPACDFWLLRYTSVLEDGSLVVCARSLKNTQNGPTMPPVQHFV 307

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEMLPSG LIRPC+GGGSIIHIVDH++LE  SVPEVLRPLYESS V+AQ+MT+A     
Sbjct: 308 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPCSVPEVLRPLYESSAVLAQKMTMAALRQL 367

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                E S   V G GR+PA LR  SQRLSRGFNDA+NGF D+GWS+M  DG +DV I +
Sbjct: 368 RQIAHEVSQSNVTGWGRRPAALRALSQRLSRGFNDALNGFTDEGWSMMGNDGMDDVTILI 427

Query: 424 NSTKSLSTASNPTNSLAFLGG-------ILCAKASMLLQNVPPALLVRFLREHRSEWADF 476
           NS+       N    L+F  G       +LCAKASMLLQNVPPA+L+RFLREHRSEWAD 
Sbjct: 428 NSSPDKLMGLN----LSFGNGFPAVSNSVLCAKASMLLQNVPPAILLRFLREHRSEWADN 483

Query: 477 NVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAF 536
           N+DAYSAA++K G  +  G R   F G Q+I+PL HT+EHEE LEVI+LEG   + EDA 
Sbjct: 484 NIDAYSAAAVKVGPCSLAGSRVGSF-GGQVILPLAHTLEHEEFLEVIKLEGVGHSPEDAM 542

Query: 537 VSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLD-SKTPDTPD 595
           + R++ LLQ+CSG+DENAVG+C+EL+FAPID  F DD PLLPSGFRIIPLD  K   +P+
Sbjct: 543 MPREMFLLQLCSGMDENAVGSCAELIFAPIDASFADDAPLLPSGFRIIPLDYGKEASSPN 602

Query: 596 TLTAHRTLDLTSSLEVGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
                RTLDL S+LE+GP  N  + + S+S    RSV+TIAF+F  E+++Q++VA+MARQ
Sbjct: 603 -----RTLDLASALEIGPTGNKGSSEYSASAGCVRSVMTIAFEFACETHMQEHVASMARQ 657

Query: 655 YVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS 714
           YVRS+ISSVQRVA+A+ PS LS   G +   G+PEA TLA WIC SY  +LG ELL+S +
Sbjct: 658 YVRSIISSVQRVALALSPSNLSSQAGLRSPLGTPEAQTLARWICNSYRCYLGVELLKSGN 717

Query: 715 VGGDSVLKNLWQHSDAILCCSLK 737
            G +S+LK+LW HSDAI+CCSLK
Sbjct: 718 EGSESILKSLWHHSDAIMCCSLK 740


>gi|147790308|emb|CAN61201.1| hypothetical protein VITISV_009744 [Vitis vinifera]
          Length = 839

 Score =  974 bits (2517), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/747 (65%), Positives = 576/747 (77%), Gaps = 42/747 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LDNGKYVRYT EQVEALER+Y +CPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 3   LDNGKYVRYTPEQVEALERLYHDCPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 62

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATTDAS 143
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN + +QQ + A  ATTD S
Sbjct: 63  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTQNATLATTDTS 122

Query: 144 CDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
           C+SVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 123 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 181

Query: 198 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTI 257
           S+GI AIS  C+GVAARACGLVSLEPT++AEILKD PSW+R+CR+++V  +   GN GTI
Sbjct: 182 SIGIVAISHGCTGVAARACGLVSLEPTRVAEILKDWPSWYRECRNVDVLNVLSTGNGGTI 241

Query: 258 ELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEM 317
           ELLY Q YAPTTLAPARDFW LRYT+ L++GSLVVCERSL+ +  GP+      FVRAE 
Sbjct: 242 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQYFVRAEK 301

Query: 318 LPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------- 368
           LPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS ++AQ+ T+A         
Sbjct: 302 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALRQLRQIS 361

Query: 369 -ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
            E S     G GR+PA LR   QRL++GFN+AVNGF D+GWS+M  DG +DV + VNS+ 
Sbjct: 362 QEVSQPTNTGWGRRPAALRALGQRLTKGFNEAVNGFTDEGWSMMESDGIDDVTLLVNSSP 421

Query: 428 SLSTASNPTNSLAF---LGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAA 484
           +     N + +  F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD ++DAYSAA
Sbjct: 422 AKMMGVNLSYASGFPSMSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAA 481

Query: 485 SLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEE-----------LLEVIRLEGHSLAQE 533
           ++KAG    P  R   + G Q+I+PL HTIEHEE            +EVI+LE     +E
Sbjct: 482 AVKAGPCTLPVSRAGGY-GGQVILPLAHTIEHEEANLIRFNCLQQFMEVIKLENVDHYRE 540

Query: 534 DAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDT 593
           D  +S D+ LLQ+CSGVD+NAVG CSEL+FAPID  F DD PLLPSGFRIIPLDS     
Sbjct: 541 DLMMSGDVFLLQLCSGVDDNAVGTCSELIFAPIDASFSDDAPLLPSGFRIIPLDSGV--- 597

Query: 594 PDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHT---RSVLTIAFQFPFESNLQDNVAT 650
            D  + +RTLDL SSLEVGPA N A+ D+S   HT   +SV+TI+FQF FE +LQ+NVA+
Sbjct: 598 -DGSSPNRTLDLASSLEVGPAGNKASSDNSG--HTGSAKSVMTISFQFAFEMHLQENVAS 654

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELL 710
           MARQYVRS+ISSVQRVA+A+ PS   P +G +  PG+PEA TLA WICQSY  +LG ELL
Sbjct: 655 MARQYVRSIISSVQRVALALSPSRFGPQMGFRPLPGTPEAHTLARWICQSYRCYLGVELL 714

Query: 711 RSDSVGGDSVLKNLWQHSDAILCCSLK 737
           +  + G +S+LK LW HSDA++CCSLK
Sbjct: 715 KPSNEGNESILKTLWHHSDAVMCCSLK 741


>gi|302398629|gb|ADL36609.1| BZIP domain class transcription factor [Malus x domestica]
          Length = 841

 Score =  973 bits (2515), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/743 (66%), Positives = 584/743 (78%), Gaps = 39/743 (5%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K Q+DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 13  KMQMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 72

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATT 140
           RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV EN Y +Q  + A  ATT
Sbjct: 73  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENTYFRQHTQNATLATT 132

Query: 141 DASCDSVVTTPQHSL--------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
           D SC+SVVT+ QH L        RDA+ PAGLLSIA+ETLAEFLSKATGTAV+WVQ+PGM
Sbjct: 133 DTSCESVVTSGQHHLTAQQHPPPRDAS-PAGLLSIAQETLAEFLSKATGTAVEWVQLPGM 191

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
           KPGPDS+GI AIS  C+GVAARACGLV L+PT++AEILKDRPSWFR+CRS++V  +   G
Sbjct: 192 KPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWFRNCRSVDVANVMSTG 251

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N GTIELLY Q YAPTTLAPARDFW LRYT+ L++GSLVVCERSL+ +  GP+      F
Sbjct: 252 NGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNF 311

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           VRAEMLPSG LIRPC+GGGSI+HIVDH++LE WSVPEVLRPLYESS ++AQ+ T+A    
Sbjct: 312 VRAEMLPSGYLIRPCEGGGSILHIVDHMDLEPWSVPEVLRPLYESSTILAQKTTMAALRN 371

Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                 E S     G GR+PA LR  SQRLS+GFN+AVNGF D+GWS++  DG +DV + 
Sbjct: 372 LRQISQEVSQPNSAGWGRRPAALRALSQRLSKGFNEAVNGFTDEGWSVLESDGVDDVTLL 431

Query: 423 VNS------TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADF 476
           VNS      + +L T   P+ S A    +LCAKASMLLQNVPPA+L+RFLREHRSEWAD 
Sbjct: 432 VNSSPGKMMSANLYTDGVPSMSTA----VLCAKASMLLQNVPPAILLRFLREHRSEWADR 487

Query: 477 NVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAF 536
           ++DAYSAA++KAG     G R   F G  +I+PL HTIEHEE +EVI++E     +ED  
Sbjct: 488 SIDAYSAAAVKAGPCNMLGPRVGSF-GDNVILPLAHTIEHEEFMEVIKIENLGHYREDMI 546

Query: 537 V-SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPD 595
           + + DI LLQ+CSGVDENAVG CSELVFAPID  F DD P+LPSGFRIIPLDS+     D
Sbjct: 547 MPAADIFLLQLCSGVDENAVGTCSELVFAPIDASFSDDAPILPSGFRIIPLDSRM----D 602

Query: 596 TLTAHRTLDLTSSLEVGPATNPAAGDSSS-CHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
           T + +RTLDL S+LEVGPA + A+GD++    +T+SV+TIAFQF FE +LQ+NVA+MARQ
Sbjct: 603 TPSPNRTLDLASALEVGPAGSRASGDNAGHSGNTKSVMTIAFQFAFEIHLQENVASMARQ 662

Query: 655 YVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS 714
           YVRS+I+SVQRVA+A+ PS      G +  PG+P+A TLA WICQSY  +LG ELL+++ 
Sbjct: 663 YVRSIIASVQRVALALSPSRFGSHAGFRPPPGTPQAQTLAGWICQSYRCYLGGELLKTE- 721

Query: 715 VGGDSVLKNLWQHSDAILCCSLK 737
            G +S+LK+LW H DAILCCSLK
Sbjct: 722 -GSESILKSLWHHPDAILCCSLK 743


>gi|356522958|ref|XP_003530109.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 838

 Score =  971 bits (2511), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/746 (65%), Positives = 580/746 (77%), Gaps = 37/746 (4%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS N   +DNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 6   GSRNGIGMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVW 65

Query: 78  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TA 136
           FQNRRCREKQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +Q  + T 
Sbjct: 66  FQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQITT 125

Query: 137 PATTDASCDSVVTT-------PQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
            AT D +C+SVVT+        QH  RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQM
Sbjct: 126 QATKDTNCESVVTSGQQHNLITQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQM 184

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
           PGMKPGPDS+GI AIS  C+GVAARACGLV LEPT++AEILKD+P WFRDCR+++V  + 
Sbjct: 185 PGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDQPLWFRDCRAVDVLNVL 244

Query: 250 PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA 309
           P  N GTIELLY Q YAPTTLAPARDFW LRYT+ L++GSLV+CERSL  +  GP+    
Sbjct: 245 PTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPV 304

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA- 368
             FVRAEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+ T+A 
Sbjct: 305 QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAA 364

Query: 369 ---------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                    E S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GW+ +  DG +DV
Sbjct: 365 LRHLRQISHEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTTIGNDGVDDV 424

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGG-------ILCAKASMLLQNVPPALLVRFLREHRSE 472
            I VNS+       N    L+F  G       +LCAKASMLLQNVPPA+L+RFLREHRSE
Sbjct: 425 TILVNSSPDKLMGLN----LSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSE 480

Query: 473 WADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQ 532
           WAD N+DAY+AA++K G  +  G R   + G Q+I+PL HTIEHEE LEVI+LEG + + 
Sbjct: 481 WADNNMDAYTAAAIKVGPCSLSGSRVGNY-GGQVILPLAHTIEHEEFLEVIKLEGIAHSP 539

Query: 533 EDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS-KTP 591
           ED  + R++ LLQ+CSG+DENAVG C+EL+ APID  F DD PLLPSGFRIIPL+S K  
Sbjct: 540 EDTIMPREMFLLQLCSGMDENAVGTCAELISAPIDASFADDAPLLPSGFRIIPLESGKEA 599

Query: 592 DTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
            +P+     RTLDL S+L+VGP+ N A+   ++    RSV+TIAF+F FES++Q++VA+M
Sbjct: 600 SSPN-----RTLDLASALDVGPSGNRASNGCANSSCMRSVMTIAFEFAFESHMQEHVASM 654

Query: 652 ARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLR 711
           ARQYVRS+ISSVQRVA+A+ PS LS   G +   G+PEA TLAHWIC SY  +LG ELL+
Sbjct: 655 ARQYVRSIISSVQRVALALSPSHLSSHAGLRSPLGTPEAQTLAHWICNSYRCYLGVELLK 714

Query: 712 SDSVGGDSVLKNLWQHSDAILCCSLK 737
           S++ G +S+LK+LW HSDAILCC+LK
Sbjct: 715 SNNEGNESLLKSLWHHSDAILCCTLK 740


>gi|357513433|ref|XP_003627005.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
 gi|355521027|gb|AET01481.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
          Length = 832

 Score =  970 bits (2508), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/740 (65%), Positives = 579/740 (78%), Gaps = 35/740 (4%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           NKH +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEP+QIKVWFQN
Sbjct: 7   NKHLMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPRQIKVWFQN 66

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT 140
           RRCREKQRKE+ RLQ VNRKLTAMNKLLMEENDRLQKQVS LV ENGY +Q   T  AT 
Sbjct: 67  RRCREKQRKESFRLQGVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRQN--TQNATK 124

Query: 141 DASCDSVVTTPQHSL------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP 194
           D SCDSVVT+ QH++      RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKP
Sbjct: 125 DTSCDSVVTSGQHNMTSQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKP 183

Query: 195 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNA 254
           GPDS+GI AIS  C+GVAARACGLV LEPT++AEILKDRP WFRDCR++++  + P  N 
Sbjct: 184 GPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPLWFRDCRAVDIVNVLPTANG 243

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           GTIELLY Q YAPTTLAPARDFW LRYT+ +++GSLV+CERSL  +  GP+      FVR
Sbjct: 244 GTIELLYMQLYAPTTLAPARDFWLLRYTSVVEDGSLVICERSLKNTQNGPSMPPVPHFVR 303

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ 368
           A+MLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYES  V+AQ+ T+A      
Sbjct: 304 ADMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESPMVLAQKTTMAALRHLR 363

Query: 369 ----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
               E S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GW++M  DG +DV I VN
Sbjct: 364 QISHEVSQPNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTMMGNDGVDDVTILVN 423

Query: 425 STKSLSTASNPTNSLAF---LGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           S+       N +    F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+DAY
Sbjct: 424 SSPDKLMGLNLSFGNGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADHNMDAY 483

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
           +AA++K G  +  G R   + G Q+I+PL HTIEHEE LEVI+L+G + + E+  ++R++
Sbjct: 484 TAAAIKVGPCSLTGSRVGNY-GGQVILPLAHTIEHEEFLEVIKLDGVAHSPEE-MMAREL 541

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS-KTPDTPDTLTAH 600
            LLQ+CSG+DENA+G C+EL+FAPID  F DD PLLPSGFRIIPL+S K   +P+     
Sbjct: 542 FLLQLCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLESGKESSSPN----- 596

Query: 601 RTLDLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVR 657
           RTLDL S+L++GP  N A+ D   +S C   RSV+TIAF+F +ES++Q+NVA MARQYVR
Sbjct: 597 RTLDLASALDIGPTGNRASSDNAGNSGC--VRSVMTIAFEFAYESHMQENVACMARQYVR 654

Query: 658 SVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGG 717
           S+ISSVQRVA+A+ PS LS   G +   G+PEA TLAHWIC SY  +LG ELL+S++ G 
Sbjct: 655 SIISSVQRVALALSPSNLSSHAGLRSPLGTPEAQTLAHWICNSYRCYLGVELLKSNTEGK 714

Query: 718 DSVLKNLWQHSDAILCCSLK 737
           +SVLK+LW HSDA+LCC+LK
Sbjct: 715 ESVLKSLWHHSDAVLCCTLK 734


>gi|357454819|ref|XP_003597690.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
 gi|109729907|tpg|DAA05767.1| TPA_inf: class III HD-Zip protein CNA1 [Medicago truncatula]
 gi|355486738|gb|AES67941.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
          Length = 836

 Score =  970 bits (2507), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/745 (65%), Positives = 579/745 (77%), Gaps = 42/745 (5%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K  +DNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILS+IEPKQIKVWFQNR
Sbjct: 7   KGVMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSHIEPKQIKVWFQNR 66

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TAPATT 140
           RCREKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVS LV ENGY +Q  + T  AT 
Sbjct: 67  RCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYFRQHTQNTNLATK 126

Query: 141 DASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP 194
           D SCDS VT      T QH  RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKP
Sbjct: 127 DTSCDSAVTSGQRSLTAQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKP 185

Query: 195 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNA 254
           GP+S+GI AIS  C GVAARACGLV LEPT++AEILKDRPSW+RDCR++++  + P  N 
Sbjct: 186 GPESIGIIAISHGCHGVAARACGLVGLEPTRVAEILKDRPSWYRDCRAVDILNVLPTANG 245

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           GTIELLY Q YAPTTLAPARD W LRYT+ L++GSLV+CERSL  +  GP+      FVR
Sbjct: 246 GTIELLYMQLYAPTTLAPARDLWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQHFVR 305

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ 368
           AEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS ++AQ+ T+       
Sbjct: 306 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTMLAQKTTMVALRHLR 365

Query: 369 ----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
               E S   V G GR+PA LR   QRLSRGFN+A+NGF D+GWS++  DG +DV I VN
Sbjct: 366 QISHEVSQSNVTGWGRRPAALRALGQRLSRGFNEALNGFTDEGWSMIGNDGVDDVTILVN 425

Query: 425 STKSLSTASNPTNSLAFLGG-------ILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
           S+       N    L+F  G       +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N
Sbjct: 426 SSPDKLMGLN----LSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNN 481

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
           +DAYSAA++KAG  ++ G R   + G Q+I+PL HTIEHEE LEVI+LEG + + EDA +
Sbjct: 482 MDAYSAAAIKAGPCSFSGSRVGNY-GGQVILPLAHTIEHEEFLEVIKLEGIAHSPEDAIM 540

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS--KTPDTPD 595
            R++ LLQ+CSG+DENAVG C+EL+FAPID  F DD PLLPSGFRIIPLDS  +  + P+
Sbjct: 541 PREVFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEVANNPN 600

Query: 596 TLTAHRTLDLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMA 652
                RTLDLTS+L++GPA N A+ D   +S C   RSV+TIAF+F FES++QD+VA+MA
Sbjct: 601 -----RTLDLTSALDIGPAGNKASNDYSGNSGC--MRSVMTIAFEFAFESHMQDHVASMA 653

Query: 653 RQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRS 712
           RQYVRS+ISSVQRVA+A+ PS L+   G +   G+PEA TLA WI  SY   LGAELL+S
Sbjct: 654 RQYVRSIISSVQRVALALSPSNLNSQGGLRTPLGTPEAQTLARWISNSYRCFLGAELLKS 713

Query: 713 DSVGGDSVLKNLWQHSDAILCCSLK 737
           ++ G +S+LK+LW H+DAILCC+LK
Sbjct: 714 NNEGSESLLKSLWHHTDAILCCTLK 738


>gi|224059140|ref|XP_002299735.1| predicted protein [Populus trichocarpa]
 gi|60327629|gb|AAX19054.1| class III HD-Zip protein 5 [Populus trichocarpa]
 gi|222846993|gb|EEE84540.1| predicted protein [Populus trichocarpa]
          Length = 851

 Score =  969 bits (2505), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/751 (65%), Positives = 572/751 (76%), Gaps = 41/751 (5%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           N   +DNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQN
Sbjct: 10  NPINMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 69

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TAPAT 139
           RRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +Q  + T  A+
Sbjct: 70  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLAS 129

Query: 140 TDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
            D SC+SVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMK
Sbjct: 130 KDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 188

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDS+GI AIS  CSGV ARACGLV LEPT++AEILKDRPSWFRDCR+++V  + P  N
Sbjct: 189 PGPDSIGIVAISHGCSGVGARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTAN 248

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIELLY Q YAPTTLAP RDFW LRYT+ L++GSLVVCERSL  +  GP+      FV
Sbjct: 249 GGTIELLYMQLYAPTTLAPGRDFWLLRYTSVLEDGSLVVCERSLKNTQNGPSMPPVQHFV 308

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEMLPSG L+RPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+ T+A     
Sbjct: 309 RAEMLPSGYLVRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 368

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                E S   V   GR+PA LR  SQRLSRGFN+A+NGF+D+GWS++  DG +DV I V
Sbjct: 369 RQIAQEASQSSVTNWGRRPAALRALSQRLSRGFNEALNGFSDEGWSMIGNDGMDDVTILV 428

Query: 424 NSTKSLSTASNPTNSLAFLG---GILCAKASMLLQ-------------NVPPALLVRFLR 467
           NS+       N + S  F      +LCAKASMLLQ             NVPPA+L+RFLR
Sbjct: 429 NSSPDKLMGLNLSFSNGFPAVSSAVLCAKASMLLQAGIQNCFLSLQHLNVPPAILLRFLR 488

Query: 468 EHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEG 527
           EHRSEWAD N+DAY+AA++K G  +  G R   F G Q+I+PL HT+EHEE LEVI+LEG
Sbjct: 489 EHRSEWADNNIDAYAAAAVKVGPCSLQGSRVGNF-GGQVILPLAHTVEHEEFLEVIKLEG 547

Query: 528 HSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLD 587
              + EDA + RD+ LLQ+C G+DENAVG C+EL+FAPID  F DD PLLPSGFRIIPLD
Sbjct: 548 VCHSPEDAIMPRDVFLLQLCCGMDENAVGTCAELIFAPIDATFADDAPLLPSGFRIIPLD 607

Query: 588 S-KTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQD 646
           S K   +P+     RTLDL S+LEVG     ++  S++   TRSV+TIAF+F FES++Q+
Sbjct: 608 SGKEASSPN-----RTLDLASALEVGAGNRASSDFSANSGCTRSVMTIAFEFAFESHMQE 662

Query: 647 NVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLG 706
           +VA+MARQY+RS+ISSVQRVA+A+ PS      G +   G+PEA TLA WICQSY  +LG
Sbjct: 663 HVASMARQYIRSIISSVQRVALALSPSHQGSQAGLRSPLGTPEAQTLARWICQSYRNYLG 722

Query: 707 AELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
            ELL+S S G +S+LK LW HSDAI+CCSLK
Sbjct: 723 VELLKSSSEGSESILKTLWHHSDAIMCCSLK 753


>gi|356522964|ref|XP_003530112.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 841

 Score =  966 bits (2498), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/752 (65%), Positives = 579/752 (76%), Gaps = 46/752 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS N   +DNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 6   GSRNGIGMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVW 65

Query: 78  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ---QLR 134
           FQNRRCREKQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +Q   Q  
Sbjct: 66  FQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTTQNT 125

Query: 135 TAPATTDASCDSVVT-------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWV 187
               T D SC+S VT       T QH  RDA+ PAGLLSIAEETLAEFLSKATGTAV+WV
Sbjct: 126 KQQPTKDTSCESAVTSGQQHNLTTQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWV 184

Query: 188 QMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFT 247
           QMPGMKPGPDS+GI AIS SC+GVAARACGLV LEPT++AEILKDRP WF+DCR+++V  
Sbjct: 185 QMPGMKPGPDSIGIVAISHSCTGVAARACGLVGLEPTRVAEILKDRPLWFQDCRAVDVLN 244

Query: 248 MFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA 307
           + P  N GTIELLY Q YAPTTLAPARDFW LRYT+ L++GSLV+CERSL  +  GP+  
Sbjct: 245 VLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSMP 304

Query: 308 SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI 367
               FVRAEMLPSG LIRPC+GGGSIIHIVDH+NLE WSVPEVLRPLYESS V+AQ+ +I
Sbjct: 305 PVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEPWSVPEVLRPLYESSTVLAQKTSI 364

Query: 368 A----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAE 417
                      E S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GW+ +  DG +
Sbjct: 365 VALRHLRQISHEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTTIGNDGVD 424

Query: 418 DVIIAVNSTKSLSTASNPTNSLAFLGG-------ILCAKASMLLQNVPPALLVRFLREHR 470
           DV I VNS+       N    L+F  G       +LCAKASMLLQNVPPA+L+RFLREHR
Sbjct: 425 DVTILVNSSPDKLMGLN----LSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHR 480

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 530
           SEWAD N+DAY+AA++K G  +  G R   + G Q+I+PL HTIEHEE LEVI+LEG + 
Sbjct: 481 SEWADNNMDAYTAAAIKVGPCSLSGSRVGNY-GGQVILPLAHTIEHEEFLEVIKLEGIAH 539

Query: 531 AQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS-K 589
           + ED  + R++ LLQ+CSG+DENAVG C+EL+ APID  F DD PLLPSGFRIIPL+S K
Sbjct: 540 SPEDTIMPREMFLLQLCSGMDENAVGTCAELISAPIDASFADDAPLLPSGFRIIPLESGK 599

Query: 590 TPDTPDTLTAHRTLDLTSSLEVGP----ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQ 645
              +P+     RTLDL S+L++G     A+N  AG+SS   + RSV+TIAF+F FES++Q
Sbjct: 600 EASSPN-----RTLDLASALDIGSSGNRASNECAGNSS---YMRSVMTIAFEFAFESHMQ 651

Query: 646 DNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHL 705
           ++VA+MARQYVRS+ISSVQRVA+A+ PS LS   G +   G+PEA TLAHWIC SY  +L
Sbjct: 652 EHVASMARQYVRSIISSVQRVALALSPSHLSSHAGLRSPLGTPEAQTLAHWICNSYRCYL 711

Query: 706 GAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           G ELL+S++ G +S+LK+LW HSDAILCC+LK
Sbjct: 712 GVELLKSNNEGNESLLKSLWHHSDAILCCTLK 743


>gi|356515619|ref|XP_003526496.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Glycine
           max]
          Length = 845

 Score =  964 bits (2492), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/744 (65%), Positives = 570/744 (76%), Gaps = 35/744 (4%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           +K  LDNGKYVRYT EQVEALER+Y ECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN
Sbjct: 12  SKVALDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 71

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPAT- 139
           RRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LV EN + +QQ     AT 
Sbjct: 72  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSFFRQQTHNNNATL 131

Query: 140 ----TDASCDSVVT------TPQ-HSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQ 188
               T+ SC+SVVT      TPQ H  RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQ
Sbjct: 132 ATTDTNTSCESVVTSGQRNLTPQQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQ 190

Query: 189 MPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTM 248
           MPGMKPGPDS+GI AIS  C GVAARACGLV LEPT++AEILKDR SWFRDCR+++V  +
Sbjct: 191 MPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDRLSWFRDCRTVDVLNV 250

Query: 249 FPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPAS 308
              GN GTIELLY Q YAPTTLAP RDFW LRYT+ L++GS VVCERSL+ +  GP    
Sbjct: 251 MSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSFVVCERSLNNTQNGPAMPP 310

Query: 309 AAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA 368
              FVRA+MLPSG LIRPC+GGGSIIHIVDH+ LE WSVPEVLRPLYESS ++AQR T+A
Sbjct: 311 VQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMVLEPWSVPEVLRPLYESSMLLAQRTTMA 370

Query: 369 ----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAED 418
                     E S   V G GR+PA LR  SQRLS+GFN+AVNGF DDGWS++  DG +D
Sbjct: 371 ALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGFADDGWSMLESDGIDD 430

Query: 419 VIIAVNSTKS----LSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWA 474
           V + VNS+ S    +S   N     +    +LCAKASMLLQNVPPA+L+RFLREHRSEWA
Sbjct: 431 VTLLVNSSPSKMMGVSLVYNNNGFPSVSSSVLCAKASMLLQNVPPAILLRFLREHRSEWA 490

Query: 475 DFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQED 534
           D ++DAYSAA++KAG  + PG R   F G Q+I+PL HTIEHEE +EVI+LE     ++D
Sbjct: 491 DSSIDAYSAAAIKAGPCSLPGARSGGF-GGQVILPLAHTIEHEEFMEVIKLENMGYYRDD 549

Query: 535 AFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTP 594
             +  D+ LLQ+CSGVDE+AVG  +ELVFAPID  F DD P+LPSGFRIIPLDS T    
Sbjct: 550 MSIPGDVFLLQLCSGVDEHAVGTSAELVFAPIDASFSDDAPILPSGFRIIPLDSGT---- 605

Query: 595 DTLTAHRTLDLTSSLEVGPATNPAAGDSSS-CHHTRSVLTIAFQFPFESNLQDNVATMAR 653
           D  + +RTLDL S+LEVG   N AA D+S+    T+SV+TIAFQF FE +LQ+N+ATMAR
Sbjct: 606 DAASPNRTLDLASALEVGTTANKAASDNSAHSGSTKSVMTIAFQFAFEVHLQENIATMAR 665

Query: 654 QYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSD 713
           QYVRS+I+SVQRV++A+ PS         L PG+PEA TLA WIC SY ++LG ELL+ +
Sbjct: 666 QYVRSIIASVQRVSLALSPSRFGSHNAFHLPPGTPEAQTLARWICNSYRFYLGVELLKCE 725

Query: 714 SVGGDSVLKNLWQHSDAILCCSLK 737
             G +S+LK+LW HSDA+LCCSLK
Sbjct: 726 --GSESILKSLWHHSDAVLCCSLK 747


>gi|356507931|ref|XP_003522716.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Glycine
           max]
          Length = 844

 Score =  963 bits (2490), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/743 (65%), Positives = 569/743 (76%), Gaps = 34/743 (4%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           +K  LDNGKYVRYT EQVEALER+Y ECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN
Sbjct: 12  SKVALDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 71

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT----A 136
           RRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LV EN + +QQ       A
Sbjct: 72  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSFFRQQTHNNATLA 131

Query: 137 PATTDASCDSVVT------TPQ-HSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
              T+ SC+SVVT      TPQ H  RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQM
Sbjct: 132 TTDTNTSCESVVTSGQRNLTPQQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQM 190

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
           PGMKPGPDS+GI AIS  C GVAARACGLV LEP ++AEILKDR SWFRDCR+++V  + 
Sbjct: 191 PGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPARVAEILKDRLSWFRDCRTVDVLNVM 250

Query: 250 PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA 309
             GN GTIELLY Q YAPTTLAP RDFW LRYT+ L++GSLVVCERSL+ +  GP     
Sbjct: 251 STGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPAMPPV 310

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA- 368
             FVRA+ML SG LIRPC+GGGSIIHIVDH+ LE WSVPEVLRPLYESS ++AQR T+A 
Sbjct: 311 QHFVRADMLASGYLIRPCEGGGSIIHIVDHMVLEPWSVPEVLRPLYESSMLLAQRTTMAA 370

Query: 369 ---------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                    E S   V G GR+PA LR  SQRLS+GFN+AVNGF DDGWS++  DG +DV
Sbjct: 371 LRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGFADDGWSMLESDGIDDV 430

Query: 420 IIAVNSTKS----LSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWAD 475
            + VNS+ S    ++   N     +    +LCAKASMLLQNVPPA+L+RFLREHRSEWAD
Sbjct: 431 TLLVNSSPSKMMGVNLGYNNNGFPSVSSSLLCAKASMLLQNVPPAILLRFLREHRSEWAD 490

Query: 476 FNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDA 535
            ++DAYSAA++KAG  + PG RP  F G Q+I+PL HTIEHEE +EVI+LE     ++D 
Sbjct: 491 SSIDAYSAAAIKAGPCSLPGARPGGF-GGQVILPLAHTIEHEEFMEVIKLENMGYYRDDM 549

Query: 536 FVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPD 595
            +  D+ LLQ+CSGVDE+AVG  +ELVFAPID  F DD P+LPSGFRIIPLDS T    D
Sbjct: 550 NIPGDVFLLQLCSGVDEHAVGTSAELVFAPIDASFSDDAPILPSGFRIIPLDSGT----D 605

Query: 596 TLTAHRTLDLTSSLEVGPATNPAAGDSSS-CHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
             + +RTLDL S+LEVG   N AAGD+S     T+SV+TIAFQF FE +LQ+N+ATMARQ
Sbjct: 606 AASPNRTLDLASALEVGTTANKAAGDNSGHSGSTKSVMTIAFQFAFEVHLQENIATMARQ 665

Query: 655 YVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS 714
           YVRS+I+SVQRV++A+ PS         L PG+PEA TLA WIC SY ++LG ELL+ + 
Sbjct: 666 YVRSIIASVQRVSLALSPSRFGSHNAFHLPPGTPEAQTLARWICNSYRFYLGVELLKCE- 724

Query: 715 VGGDSVLKNLWQHSDAILCCSLK 737
            G +S+LK+LW HSDA+LCCSLK
Sbjct: 725 -GSESILKSLWHHSDAVLCCSLK 746


>gi|110349554|gb|ABG73252.1| class III HD-Zip protein HDZ33 [Ginkgo biloba]
          Length = 776

 Score =  962 bits (2487), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/684 (70%), Positives = 551/684 (80%), Gaps = 29/684 (4%)

Query: 77  WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA 136
           WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGY++QQ++TA
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYLRQQIQTA 60

Query: 137 P-ATTDASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWV 187
             ATTD SC+SVVT        TPQH  RDA+ PAGLLSIAEETL +FLSKATGTAVDW+
Sbjct: 61  SIATTDTSCESVVTSGPHQHHLTPQHPPRDAS-PAGLLSIAEETLTQFLSKATGTAVDWI 119

Query: 188 QMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFT 247
           QMPGMKPGPDS+GI AIS SC+GVA+RACGLV LE +K+AEILKDRPSW RDCR L+V T
Sbjct: 120 QMPGMKPGPDSIGIVAISHSCTGVASRACGLVGLESSKVAEILKDRPSWLRDCRCLDVLT 179

Query: 248 MFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA 307
            FP GN GTIELLYTQ YAPTTLA ARD WTLRYT+ L++GSLVVCERSL+G+  GPN  
Sbjct: 180 AFPTGNGGTIELLYTQMYAPTTLASARDIWTLRYTSVLEDGSLVVCERSLTGTQGGPNMP 239

Query: 308 SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI 367
           S   FVRAEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEV+RPLYESS V+AQ+MTI
Sbjct: 240 SVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVIRPLYESSTVLAQKMTI 299

Query: 368 A----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAE 417
           +          E SGEVV G GRQPA LR FSQRL RGFN+AVNGF DDGWSL+  DG +
Sbjct: 300 SALRHLRQVAQEVSGEVVLGWGRQPAALRAFSQRLGRGFNEAVNGFTDDGWSLLGNDGMD 359

Query: 418 DVIIAVNSTKSLSTASN--PTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWA 474
           DV IA+NS+ S   AS    ++ LA L GGILCAKASMLLQNVPPALLVRFLREHRSEWA
Sbjct: 360 DVTIAINSSPSKLLASQLAASDGLAALGGGILCAKASMLLQNVPPALLVRFLREHRSEWA 419

Query: 475 DFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQED 534
           D N+DAYS+A++KA  Y+ P  R   F GSQ+I+PL HT+EHEE LEVI+LEGH L  E+
Sbjct: 420 DCNIDAYSSAAMKANPYSIPSSRGGVF-GSQVILPLAHTMEHEEFLEVIKLEGHGLTHEE 478

Query: 535 AFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTP 594
             +SRD+ LLQ+CSG+DENAVG C++LVFAPID  F DD PLLPSGFR+IPLDS T    
Sbjct: 479 TVLSRDMFLLQLCSGIDENAVGCCAQLVFAPIDASFADDAPLLPSGFRVIPLDSGT---- 534

Query: 595 DTLTAHRTLDLTSSLEVGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDNVATMAR 653
           D  T +RTLDL S+L+VG A    +GD  SS ++ RSVLTIAFQF +E++L+DNVA MAR
Sbjct: 535 DGSTPNRTLDLASALDVGSAGTRTSGDYGSSTYNMRSVLTIAFQFTYETHLRDNVAAMAR 594

Query: 654 QYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSD 713
           QYVRSV++SVQRVAMA+ PS  S  LGP+  PG+PEALTLA WICQSY +HLG ELLR D
Sbjct: 595 QYVRSVVASVQRVAMALAPSRQSTLLGPRPPPGTPEALTLAGWICQSYRFHLGLELLRGD 654

Query: 714 SVGGDSVLKNLWQHSDAILCCSLK 737
               +SVLK LW HSDAI+CCS K
Sbjct: 655 CEASESVLKLLWHHSDAIMCCSWK 678


>gi|297852954|ref|XP_002894358.1| ATHB-15 [Arabidopsis lyrata subsp. lyrata]
 gi|297340200|gb|EFH70617.1| ATHB-15 [Arabidopsis lyrata subsp. lyrata]
          Length = 837

 Score =  959 bits (2479), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/739 (66%), Positives = 573/739 (77%), Gaps = 38/739 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LDNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR--TAPATTDA 142
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN Y +Q     + PA  D 
Sbjct: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQHTPNPSLPAK-DT 131

Query: 143 SCDSVVTTPQHSL------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGP 196
           SC+SVVT+ QH L      RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKPGP
Sbjct: 132 SCESVVTSGQHQLASQNPQRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGP 190

Query: 197 DSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGT 256
           DS+GI AIS  C+GVAARACGLV LEPT++AEI+KDRPSWFR+CR+++V  + P  N GT
Sbjct: 191 DSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVDVMNVLPTANGGT 250

Query: 257 IELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAE 316
           IELLY Q YAPTTLAP RDFW LRYT+ L++GSLVVCERSL  +  GP+      FVRAE
Sbjct: 251 IELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAE 310

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ET 370
           MLPSG LIRPCDGGGSIIHIVDH++LEA SVPEVLRPLYES KV+AQ+ T+A      + 
Sbjct: 311 MLPSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQLKQI 370

Query: 371 SGEV------VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
           + EV      V G GR+PA LR  SQRLSRGFN+AVNGF D+GWS++  D  +DV I VN
Sbjct: 371 AQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-DSMDDVTITVN 429

Query: 425 STKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           S+       N T S  F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+DAY
Sbjct: 430 SSPDKLMGINLTFSNGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAY 489

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
            AA++K G    P        G Q+I+PL HTIEHEE +EVI+LEG   + EDA V RDI
Sbjct: 490 LAAAVKVG----PCSARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDI 545

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
            LLQ+CSG+DENAVG C+EL+FAPID  F DD PLLPSGFRIIPLDS   +     + +R
Sbjct: 546 FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKQEVS---SPNR 602

Query: 602 TLDLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
           TLDL S+LE+G A   A+ D   +S+C   RSV+TIAF+F  ES++Q++VA+MARQYVR 
Sbjct: 603 TLDLASALEIGSAGTKASADQSGNSTC--ARSVMTIAFEFGIESHMQEHVASMARQYVRG 660

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           +ISSVQRVA+A+ PS +S  +G +   G+PEA TLA WICQSY  ++G ELL+S+S G +
Sbjct: 661 IISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSEGNE 720

Query: 719 SVLKNLWQHSDAILCCSLK 737
           S+LKNLW H+DAI+CCS+K
Sbjct: 721 SILKNLWHHTDAIICCSMK 739


>gi|145324911|ref|NP_001077702.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|332194641|gb|AEE32762.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 794

 Score =  956 bits (2471), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/739 (66%), Positives = 574/739 (77%), Gaps = 39/739 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LDNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 13  LDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR--TAPATTDA 142
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN Y +Q     + PA  D 
Sbjct: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQHTPNPSLPAK-DT 131

Query: 143 SCDSVVTTPQHSL------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGP 196
           SC+SVVT+ QH L      RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKPGP
Sbjct: 132 SCESVVTSGQHQLASQNPQRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGP 190

Query: 197 DSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGT 256
           DS+GI AIS  C+GVAARACGLV LEPT++AEI+KDRPSWFR+CR++EV  + P  N GT
Sbjct: 191 DSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVMNVLPTANGGT 250

Query: 257 IELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAE 316
           +ELLY Q YAPTTLAP RDFW LRYT+ L++GSLVVCERSL  +  GP+      FVRAE
Sbjct: 251 VELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAE 310

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ET 370
           ML SG LIRPCDGGGSIIHIVDH++LEA SVPEVLRPLYES KV+AQ+ T+A      + 
Sbjct: 311 MLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQLKQI 370

Query: 371 SGEV------VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
           + EV      V G GR+PA LR  SQRLSRGFN+AVNGF D+GWS++  D  +DV I VN
Sbjct: 371 AQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-DSMDDVTITVN 429

Query: 425 STKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           S+       N T +  F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+DAY
Sbjct: 430 SSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAY 489

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
            AA++K G  +    R   F G Q+I+PL HTIEHEE +EVI+LEG   + EDA V RDI
Sbjct: 490 LAAAVKVGPCS---ARVGGF-GGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDI 545

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
            LLQ+CSG+DENAVG C+EL+FAPID  F DD PLLPSGFRIIPLDS      +  + +R
Sbjct: 546 FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS----AKEVSSPNR 601

Query: 602 TLDLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
           TLDL S+LE+G A   A+ D   +S+C   RSV+TIAF+F  ES++Q++VA+MARQYVR 
Sbjct: 602 TLDLASALEIGSAGTKASTDQSGNSTC--ARSVMTIAFEFGIESHMQEHVASMARQYVRG 659

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           +ISSVQRVA+A+ PS +S  +G +   G+PEA TLA WICQSY  ++G ELL+S+S G +
Sbjct: 660 IISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSDGNE 719

Query: 719 SVLKNLWQHSDAILCCSLK 737
           S+LKNLW H+DAI+CCS+K
Sbjct: 720 SILKNLWHHTDAIICCSMK 738


>gi|449436888|ref|XP_004136224.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Cucumis
           sativus]
          Length = 842

 Score =  956 bits (2470), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/740 (64%), Positives = 569/740 (76%), Gaps = 30/740 (4%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LDNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 18  LDNGKYVRYTPEQVEALERLYYECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 77

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATTDAS 143
           EKQRKEASRLQTVNRKLTAMN+LLMEENDRLQKQVSQLV EN Y +QQ + A  ATTD S
Sbjct: 78  EKQRKEASRLQTVNRKLTAMNRLLMEENDRLQKQVSQLVYENSYFRQQTQNATLATTDTS 137

Query: 144 CDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
           C+SVVT      TP H  +DA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 138 CESVVTSGQQNLTPPHPPKDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPD 196

Query: 198 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTI 257
           S+GI AIS  C+GVAARACGLV LEPT++AEILKD PSWFRDCR+++V  +   GN GTI
Sbjct: 197 SIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDWPSWFRDCRAVDVLNVLSTGNGGTI 256

Query: 258 ELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEM 317
           ELLY Q YAPTTLAPARDFW LRYT+ L++GSLVVCERSL+ +  GP+      FVRAEM
Sbjct: 257 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVRAEM 316

Query: 318 LPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------- 368
           LPSG LIRPC+GGGSIIHIVDH++L+ WSVPEVLRPLY+SS ++AQ+ T+A         
Sbjct: 317 LPSGYLIRPCEGGGSIIHIVDHMDLDPWSVPEVLRPLYKSSTLLAQKNTMAALRLLRQIS 376

Query: 369 -ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
            E S   V G GR+PA LR  SQ+LSRGFN+AVNGF D+GWSL+  DG +DV + VN + 
Sbjct: 377 QEVSQPNVTGWGRRPAALRALSQKLSRGFNEAVNGFTDEGWSLLENDGVDDVTLLVNMSH 436

Query: 428 SLS-TASNPTNSLAF---LGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSA 483
             +   +N + S  F      +LCAKASMLLQNV PA+L+RFLREHRSEWAD ++DAYSA
Sbjct: 437 GKTMMGANISYSNGFPSMSNAVLCAKASMLLQNVTPAMLIRFLREHRSEWADSSIDAYSA 496

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
           A++K G    PG     F G Q+I+PL  T+EHEE +EV++ E     ++D  +  DI L
Sbjct: 497 AAIKTGQCGLPGSHAGTF-GGQVILPLAQTVEHEEFMEVVKFENVGHYRDDMLMPGDIFL 555

Query: 544 LQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTL 603
           LQ+C+GVDEN VG  +EL+FAPID  F DD P+LPSGFRIIPLDS      D  + +RTL
Sbjct: 556 LQLCNGVDENTVGTSAELIFAPIDASFSDDAPILPSGFRIIPLDSGM----DASSPNRTL 611

Query: 604 DLTSSLEVGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISS 662
           DL S+L+VGPA N A+GD +     ++SV+TIAFQF F+ +LQDNVA MARQYVRS+I+S
Sbjct: 612 DLASALDVGPAGNRASGDCAGQSGKSKSVMTIAFQFVFDVHLQDNVAAMARQYVRSIIAS 671

Query: 663 VQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLK 722
           VQRVA+A+ PS   P    +   G+PEA TLA WI QSY  ++G ELL+++  G +SVLK
Sbjct: 672 VQRVALALSPSNFGPHANLQTPAGAPEAQTLARWITQSYRCYMGMELLKNE--GRESVLK 729

Query: 723 NLWQHSDAILCCSLKVPLQF 742
           +LW HSDA++CCSLK    F
Sbjct: 730 SLWHHSDAVMCCSLKALPNF 749


>gi|224092274|ref|XP_002309538.1| predicted protein [Populus trichocarpa]
 gi|60327635|gb|AAX19057.1| class III HD-Zip protein 8 [Populus trichocarpa]
 gi|222855514|gb|EEE93061.1| predicted protein [Populus trichocarpa]
          Length = 828

 Score =  955 bits (2468), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/741 (65%), Positives = 577/741 (77%), Gaps = 39/741 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILS+IEPKQIKVWFQNRRCR
Sbjct: 1   MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSHIEPKQIKVWFQNRRCR 60

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--ATTDA 142
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN Y +QQ + A   ATTD 
Sbjct: 61  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYFRQQTQNATNLATTDT 120

Query: 143 SCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGP 196
           SC+SVVT      TPQH  RDA+ PAGLLSIAEETLA+FLSKATGTAV+WVQMPGMKPGP
Sbjct: 121 SCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLAQFLSKATGTAVEWVQMPGMKPGP 179

Query: 197 DSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGT 256
           DS+GI AIS  C+GVAARACGLV LEPT++AEILKDRPSWFRDCR+++V      G+ GT
Sbjct: 180 DSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVVNALSTGSGGT 239

Query: 257 IELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAE 316
           IELLY Q YAPTTLAPARDFW LRYT+ L++GSLVVCERSL+ +  GP+      FVRAE
Sbjct: 240 IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPTQHFVRAE 299

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-------- 368
           MLPSG LIRPC+GGGSIIH+VDH++LE WSVPEVLRPLYESS ++AQ+ T+A        
Sbjct: 300 MLPSGYLIRPCEGGGSIIHVVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALRHLRQV 359

Query: 369 --ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNST 426
             E S   V G GR+PA LR  SQRLS+GFN+AVNGF D+GWS++  DG +DV + VNS+
Sbjct: 360 SQEVSQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFADEGWSMLESDGIDDVTVLVNSS 419

Query: 427 KSLSTASNPTNSLAF---LGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSA 483
            +     N + +  F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD  +DAY+A
Sbjct: 420 PAKMMGVNFSYANGFPSMSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADSGIDAYAA 479

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEE----LLEVIRLEGHSLAQEDAFVSR 539
           A++KAG  + P  R   F G Q+I+PL HTIEHEE     +EVI+LE     +ED  +  
Sbjct: 480 AAVKAGPCSLPMSRAGNF-GGQVILPLAHTIEHEEASTSFMEVIKLENMGY-REDMLMPG 537

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA 599
           D+ LLQ+CSGVDENAVG C+EL+FAPID  F DD P++PSGFRIIPLDS      D  + 
Sbjct: 538 DVFLLQLCSGVDENAVGTCAELIFAPIDASFSDDAPIIPSGFRIIPLDSGM----DASSP 593

Query: 600 HRTLDLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYV 656
           +RTLDL S+LEVGPA N A+GD    S C  T+SV+TIAFQF FE +LQ+NVA+MARQYV
Sbjct: 594 NRTLDLASALEVGPAGNRASGDLSGRSGC--TKSVMTIAFQFAFEMHLQENVASMARQYV 651

Query: 657 RSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVG 716
           RS+I+SVQRVA+A+ PS      G +  PG+PEA TLA WIC+SY  +LG ELL+++  G
Sbjct: 652 RSIIASVQRVALALSPSHFGSHAGFRPPPGTPEAHTLARWICESYRCYLGVELLKNE--G 709

Query: 717 GDSVLKNLWQHSDAILCCSLK 737
            +S+LK LW HSDA++CCSLK
Sbjct: 710 SESILKTLWHHSDALMCCSLK 730


>gi|30695149|ref|NP_849795.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|332194640|gb|AEE32761.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 837

 Score =  954 bits (2465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/739 (65%), Positives = 572/739 (77%), Gaps = 38/739 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LDNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 13  LDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR--TAPATTDA 142
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN Y +Q     + PA  D 
Sbjct: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQHTPNPSLPAK-DT 131

Query: 143 SCDSVVTTPQHSL------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGP 196
           SC+SVVT+ QH L      RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKPGP
Sbjct: 132 SCESVVTSGQHQLASQNPQRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGP 190

Query: 197 DSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGT 256
           DS+GI AIS  C+GVAARACGLV LEPT++AEI+KDRPSWFR+CR++EV  + P  N GT
Sbjct: 191 DSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVMNVLPTANGGT 250

Query: 257 IELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAE 316
           +ELLY Q YAPTTLAP RDFW LRYT+ L++GSLVVCERSL  +  GP+      FVRAE
Sbjct: 251 VELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAE 310

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ET 370
           ML SG LIRPCDGGGSIIHIVDH++LEA SVPEVLRPLYES KV+AQ+ T+A      + 
Sbjct: 311 MLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQLKQI 370

Query: 371 SGEV------VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
           + EV      V G GR+PA LR  SQRLSRGFN+AVNGF D+GWS++  D  +DV I VN
Sbjct: 371 AQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-DSMDDVTITVN 429

Query: 425 STKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           S+       N T +  F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+DAY
Sbjct: 430 SSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAY 489

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
            AA++K G    P        G Q+I+PL HTIEHEE +EVI+LEG   + EDA V RDI
Sbjct: 490 LAAAVKVG----PCSARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDI 545

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
            LLQ+CSG+DENAVG C+EL+FAPID  F DD PLLPSGFRIIPLDS   +     + +R
Sbjct: 546 FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKQEVS---SPNR 602

Query: 602 TLDLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
           TLDL S+LE+G A   A+ D   +S+C   RSV+TIAF+F  ES++Q++VA+MARQYVR 
Sbjct: 603 TLDLASALEIGSAGTKASTDQSGNSTC--ARSVMTIAFEFGIESHMQEHVASMARQYVRG 660

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           +ISSVQRVA+A+ PS +S  +G +   G+PEA TLA WICQSY  ++G ELL+S+S G +
Sbjct: 661 IISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSDGNE 720

Query: 719 SVLKNLWQHSDAILCCSLK 737
           S+LKNLW H+DAI+CCS+K
Sbjct: 721 SILKNLWHHTDAIICCSMK 739


>gi|15218158|ref|NP_175627.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|75216693|sp|Q9ZU11.1|ATB15_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-15; AltName:
           Full=HD-ZIP protein ATHB-15; AltName: Full=Homeodomain
           transcription factor ATHB-15; AltName: Full=Protein
           CORONA; AltName: Full=Protein INCURVATA 4
 gi|4220462|gb|AAD12689.1| Strong similarity to gb|Z50851 HD-zip (athb-8) gene from
           Arabidopsis thaliana containing Homeobox PF|00046 and
           bZIP PF|00170 domains [Arabidopsis thaliana]
 gi|16974581|gb|AAL31186.1| At1g52150/F5F19_21 [Arabidopsis thaliana]
 gi|19578319|emb|CAD28400.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|332194639|gb|AEE32760.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 836

 Score =  954 bits (2465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/739 (65%), Positives = 572/739 (77%), Gaps = 39/739 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LDNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 13  LDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR--TAPATTDA 142
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN Y +Q     + PA  D 
Sbjct: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQHTPNPSLPAK-DT 131

Query: 143 SCDSVVTTPQHSL------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGP 196
           SC+SVVT+ QH L      RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKPGP
Sbjct: 132 SCESVVTSGQHQLASQNPQRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGP 190

Query: 197 DSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGT 256
           DS+GI AIS  C+GVAARACGLV LEPT++AEI+KDRPSWFR+CR++EV  + P  N GT
Sbjct: 191 DSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVMNVLPTANGGT 250

Query: 257 IELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAE 316
           +ELLY Q YAPTTLAP RDFW LRYT+ L++GSLVVCERSL  +  GP+      FVRAE
Sbjct: 251 VELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAE 310

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ET 370
           ML SG LIRPCDGGGSIIHIVDH++LEA SVPEVLRPLYES KV+AQ+ T+A      + 
Sbjct: 311 MLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQLKQI 370

Query: 371 SGEV------VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
           + EV      V G GR+PA LR  SQRLSRGFN+AVNGF D+GWS++  D  +DV I VN
Sbjct: 371 AQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-DSMDDVTITVN 429

Query: 425 STKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           S+       N T +  F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+DAY
Sbjct: 430 SSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAY 489

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
            AA++K G    P        G Q+I+PL HTIEHEE +EVI+LEG   + EDA V RDI
Sbjct: 490 LAAAVKVG----PCSARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDI 545

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
            LLQ+CSG+DENAVG C+EL+FAPID  F DD PLLPSGFRIIPLDS      +  + +R
Sbjct: 546 FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS----AKEVSSPNR 601

Query: 602 TLDLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
           TLDL S+LE+G A   A+ D   +S+C   RSV+TIAF+F  ES++Q++VA+MARQYVR 
Sbjct: 602 TLDLASALEIGSAGTKASTDQSGNSTC--ARSVMTIAFEFGIESHMQEHVASMARQYVRG 659

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           +ISSVQRVA+A+ PS +S  +G +   G+PEA TLA WICQSY  ++G ELL+S+S G +
Sbjct: 660 IISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSDGNE 719

Query: 719 SVLKNLWQHSDAILCCSLK 737
           S+LKNLW H+DAI+CCS+K
Sbjct: 720 SILKNLWHHTDAIICCSMK 738


>gi|59709573|gb|AAW88440.1| CORONA [Arabidopsis thaliana]
          Length = 836

 Score =  954 bits (2465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/739 (65%), Positives = 573/739 (77%), Gaps = 39/739 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LDNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 13  LDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR--TAPATTDA 142
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN Y +Q     + PA  D 
Sbjct: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQHTPNPSLPAK-DT 131

Query: 143 SCDSVVTTPQHSL------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGP 196
           SC+SVVT+ QH L      RDA+ PAGLLSIAEETLAEFLSKATGTAV+W+QMPGMKPGP
Sbjct: 132 SCESVVTSGQHQLASQNPQRDAS-PAGLLSIAEETLAEFLSKATGTAVEWIQMPGMKPGP 190

Query: 197 DSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGT 256
           DS+GI AIS  C+GVAARACGLV LEPT++AEI+KDRPSWFR+CR+++V  + P  N GT
Sbjct: 191 DSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVDVMNVLPTANGGT 250

Query: 257 IELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAE 316
           +ELLY Q YAPTTLAP RDFW LRYT+ L++GSLVVCERSL  +  GP+      FVRAE
Sbjct: 251 VELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAE 310

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ET 370
           ML SG LIRPCDGGGSIIHIVDH++LEA SVPEVLRPLYES KV+AQ+ T+A      + 
Sbjct: 311 MLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQLKQI 370

Query: 371 SGEV------VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
           + EV      V G GR+PA LR  SQRLSRGFN+AVNGF D+GWS++  D  +DV I VN
Sbjct: 371 AQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-DSMDDVTITVN 429

Query: 425 STKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           S+       N T +  F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+DAY
Sbjct: 430 SSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAY 489

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
            AA++K G    P        G Q+I+PL HTIEHEE +EVI+LEG   + EDA V RDI
Sbjct: 490 LAAAVKVG----PCSARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDI 545

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
            LLQ+CSG+DENAVG C+EL+FAPID  F DD PLLPSGFRIIPLDS      +  + +R
Sbjct: 546 FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS----AKEVSSPNR 601

Query: 602 TLDLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
           TLDL S+LE+G A   A+ D   +S+C  TRSV+TIAF+F  ES++Q++VA+MARQYVR 
Sbjct: 602 TLDLASALEIGSAGTKASTDLSGNSTC--TRSVMTIAFEFGIESHMQEHVASMARQYVRG 659

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           +ISSVQRVA+A+ PS +S  +G +   G+PEA TLA WICQSY  ++G ELL+S+S G +
Sbjct: 660 IISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSDGNE 719

Query: 719 SVLKNLWQHSDAILCCSLK 737
           S+LKNLW H+DAI+CCS+K
Sbjct: 720 SILKNLWHHTDAIICCSMK 738


>gi|357466691|ref|XP_003603630.1| Class III HD-Zip protein [Medicago truncatula]
 gi|355492678|gb|AES73881.1| Class III HD-Zip protein [Medicago truncatula]
          Length = 834

 Score =  953 bits (2463), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/735 (65%), Positives = 567/735 (77%), Gaps = 27/735 (3%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           +K  +DNGKYVRYT EQVEALER+Y ECPKP+SLRRQQLIRECPILS+IEPKQIKVWFQN
Sbjct: 11  SKIAMDNGKYVRYTPEQVEALERLYHECPKPTSLRRQQLIRECPILSHIEPKQIKVWFQN 70

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TAPAT 139
           RRCREKQRKEA RLQ VNRKLTAMNKLLMEENDRLQKQVS LV EN + +Q  + T  AT
Sbjct: 71  RRCREKQRKEAGRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENTFFRQHTQNTTLAT 130

Query: 140 TDASCDSVVTTPQH--SLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
           TD SC+SVVT+ Q     RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 131 TDTSCESVVTSGQQHPQPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPD 189

Query: 198 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTI 257
           S+GI AIS    GVAARACGLV LEP ++AEILKDR SW+RDCR+++V  +   GN GTI
Sbjct: 190 SIGIVAISHGSPGVAARACGLVGLEPARVAEILKDRLSWYRDCRTVDVLNVMSTGNGGTI 249

Query: 258 ELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEM 317
           ELLY Q YAPTTLAP RDFW LRYT+ L++GSLVVCERSL+ +  GP+      FVRAE+
Sbjct: 250 ELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPSMPPVPHFVRAEV 309

Query: 318 LPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------- 368
           LPSG LIRPC+GGGSIIHIVDH+ LE WSVPEVLRPLYESS ++AQR T+A         
Sbjct: 310 LPSGYLIRPCEGGGSIIHIVDHMLLEPWSVPEVLRPLYESSMLLAQRTTMAALRHLRQIS 369

Query: 369 -ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
            E S   V G GR+PA LR  SQRLS+GFN+AVNGF DDGWS++  DG +DV + VNS+ 
Sbjct: 370 QEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGFTDDGWSMLDSDGIDDVTLLVNSSP 429

Query: 428 SLSTASNPTNSLAF---LGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAA 484
           S     N   +  F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD ++DAYSAA
Sbjct: 430 SKMMGLNLGYNNGFPSVTSSVLCAKASMLLQNVPPAILLRFLREHRSEWADTSIDAYSAA 489

Query: 485 SLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLL 544
           ++KAG  + PG R   F G Q+I+PL HTIEHEE +EVI+LE     ++D  +  DI LL
Sbjct: 490 AIKAGPCSLPGARTGAF-GGQVILPLAHTIEHEEFMEVIKLENMGYYRDDMTMPGDIFLL 548

Query: 545 QICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLD 604
           Q+CSGVDE+AVG  +EL+FAPID  F DD P+LPSGFRIIPL+S T    D  + +RTLD
Sbjct: 549 QLCSGVDEHAVGTSAELIFAPIDASFSDDAPILPSGFRIIPLESGT----DAASPNRTLD 604

Query: 605 LTSSLEVGPATNPAAGDSSSCHH--TRSVLTIAFQFPFESNLQDNVATMARQYVRSVISS 662
           L S+LEVG   N A GD+S  H   T+SV+TIAFQF FE++LQDN+A MARQYVRS+++S
Sbjct: 605 LASALEVGTTGNKAGGDNSG-HSGITKSVMTIAFQFAFEAHLQDNIAAMARQYVRSIVAS 663

Query: 663 VQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLK 722
           VQRV++A+ PS         L PG+PEA TL  WIC SY ++LGAELL+ +  G +S+LK
Sbjct: 664 VQRVSLALSPSRFGSQNAFPLPPGTPEAQTLTRWICNSYRFYLGAELLKCE--GSESILK 721

Query: 723 NLWQHSDAILCCSLK 737
           +LW HSDA+LCCSLK
Sbjct: 722 SLWHHSDAVLCCSLK 736


>gi|224142954|ref|XP_002324794.1| predicted protein [Populus trichocarpa]
 gi|60327633|gb|AAX19056.1| class III HD-Zip protein 7 [Populus trichocarpa]
 gi|222866228|gb|EEF03359.1| predicted protein [Populus trichocarpa]
          Length = 823

 Score =  950 bits (2456), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/737 (65%), Positives = 570/737 (77%), Gaps = 36/737 (4%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +DNGKYVRYT EQVEALER+Y ECPKP+S RRQQLIRECPILS+IEPKQIKVWFQNRRCR
Sbjct: 1   MDNGKYVRYTPEQVEALERLYHECPKPTSTRRQQLIRECPILSHIEPKQIKVWFQNRRCR 60

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--ATTDA 142
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN Y +QQ + A   ATTD 
Sbjct: 61  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYFRQQTQNATTLATTDT 120

Query: 143 SCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGP 196
           SC+SVVT      TPQH  RDA+ PAGLLSIAEE LA+FLSKATGTAV+WVQMPGMKPGP
Sbjct: 121 SCESVVTSGQHRLTPQHPPRDAS-PAGLLSIAEENLAQFLSKATGTAVEWVQMPGMKPGP 179

Query: 197 DSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGT 256
           DS+GI AIS  C+GVAARACGLV LEPT++AEILKDRPSWFRDCR+++V       N GT
Sbjct: 180 DSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVINAMSTANGGT 239

Query: 257 IELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAE 316
           IELLY Q YAPTTLAPARDF  LRYT+ L++GSLVVCERSL+ +  GP+      FVRAE
Sbjct: 240 IELLYMQLYAPTTLAPARDFLLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPTQHFVRAE 299

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-------- 368
           MLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS ++AQ+ T+A        
Sbjct: 300 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALRHLRQI 359

Query: 369 --ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNST 426
             E S   V G GR+PA LR  SQRLS+GFN+AVNGF D+GWSL+  DG +DV + VNS+
Sbjct: 360 SQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFADEGWSLLESDGIDDVTVLVNSS 419

Query: 427 KSLSTASNPTNSLAF---LGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSA 483
            + +   N +    F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD  +DAY+A
Sbjct: 420 PTKTMGVNFSYDNGFPSMNNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNGIDAYAA 479

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
           +++KAG  + P  R   F G Q+I+PL HTIE+EE  +VI+LE     +ED  +  D+ L
Sbjct: 480 SAIKAGPCSLPVSRAGNF-GGQVILPLAHTIENEE-AKVIKLENMGY-REDMLMPGDVFL 536

Query: 544 LQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTL 603
           LQ+CSGVDENAVG C+EL+FAPID  F DD P++PSGFRIIPLDS      D  + +RTL
Sbjct: 537 LQLCSGVDENAVGTCAELIFAPIDASFSDDAPIIPSGFRIIPLDSGM----DASSPNRTL 592

Query: 604 DLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVI 660
           DL S+LEVGPA N A+GD    S C  T+SV+TIAFQF FE +LQ+NVA+MARQYVRS+I
Sbjct: 593 DLASALEVGPAGNRASGDLSGRSGC--TKSVMTIAFQFAFEMHLQENVASMARQYVRSII 650

Query: 661 SSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSV 720
           +SVQRVA+A+ PS      G     G+PEA TLA WIC+SY  +LG +LL+++  G DS+
Sbjct: 651 ASVQRVALALSPSHFGSHAGFWPPHGTPEAHTLARWICESYRIYLGVKLLKNE--GSDSI 708

Query: 721 LKNLWQHSDAILCCSLK 737
           LK LW HSDA++CCSLK
Sbjct: 709 LKTLWHHSDALVCCSLK 725


>gi|206572101|gb|ACI13683.1| putative PHV HD-ZIPIII [Malus x domestica]
          Length = 783

 Score =  949 bits (2454), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/690 (69%), Positives = 549/690 (79%), Gaps = 33/690 (4%)

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           IKVWFQNRRCREKQRKE+SRLQTVNRKLTAMNKLLMEENDRLQKQVS LV ENG+MKQQL
Sbjct: 1   IKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGFMKQQL 60

Query: 134 RTAPATT-DASCDSVVT----------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGT 182
            TA  TT D SC+SVV           TPQH  RDANNPAGLL+IAEETLAEFLSKATGT
Sbjct: 61  HTASGTTTDNSCESVVMSGQHQQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGT 120

Query: 183 AVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRS 242
           AVDWVQM GMKPGPDS+GI A+S++CSGVAARACGLVSLEPTK+AEILKDR SWFRDCR 
Sbjct: 121 AVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRKSWFRDCRC 180

Query: 243 LEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGA 302
           LEV ++ PAGN GTIEL+Y Q YAPTTLA ARDFWTLRYTT+L++GSLVVCERSL+ S  
Sbjct: 181 LEVLSLIPAGNGGTIELVYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVVCERSLTSSTG 240

Query: 303 GPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA 362
           GP   ++A FVRAEMLPSG LIRPC+GGGSII+IVDH++L+AWSVPEVLR LYESSK++A
Sbjct: 241 GPPGPTSASFVRAEMLPSGYLIRPCEGGGSIINIVDHVDLDAWSVPEVLRSLYESSKILA 300

Query: 363 QRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMT 412
           Q+ TI+          E+SGE+ +G GRQPAVLRTF QRL  GFNDAVNGF DDGW+LM 
Sbjct: 301 QKTTISALRHIRQIAQESSGEIQHGGGRQPAVLRTFCQRLCSGFNDAVNGFADDGWTLMG 360

Query: 413 CDGAEDVIIAVNST-KSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRS 471
            DG EDV IA+NS+ K L +  N +    F GG+LCAKASMLLQ+VPPALLVRFLREHR+
Sbjct: 361 SDGVEDVTIAINSSPKVLGSQYNTSIFPPFGGGVLCAKASMLLQSVPPALLVRFLREHRA 420

Query: 472 EWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLA 531
           EWAD+ VDAYSAA LKA  YA P  R   F  +Q I+PL  T+EHEE LEV+RLEG + +
Sbjct: 421 EWADYGVDAYSAACLKASPYAVPLARGGGFPSTQNILPLAQTVEHEEFLEVVRLEGPAFS 480

Query: 532 QEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTP 591
            ED  ++RD++LLQ+CSGVDENAVGAC++LVFAPIDE F DD PLLPSGF +IPLD K  
Sbjct: 481 PEDVALTRDMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAPLLPSGFHVIPLDPKA- 539

Query: 592 DTPDTLTAHRTLDLTSSLEVGP----ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDN 647
              D  TA RTLDL S+LEVG     A N A G+S   ++ RSVLTIAFQF FE++L+DN
Sbjct: 540 ---DGPTATRTLDLASTLEVGTSGARAINDADGNS---YNRRSVLTIAFQFTFENHLRDN 593

Query: 648 VATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGA 707
           VA MARQYVRSV+SSVQRVAMAI PS LS  +GPK  PG PEA TLA WI +S+  H G 
Sbjct: 594 VAAMARQYVRSVVSSVQRVAMAIAPSPLSSQIGPKPLPGCPEAHTLARWIFRSFRIHTGG 653

Query: 708 ELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           EL R D    D++LK LW+HSDAI+CCS+K
Sbjct: 654 ELFRVDISSSDAILKQLWRHSDAIMCCSVK 683


>gi|110349552|gb|ABG73251.1| class III HD-Zip protein HDZ32 [Ginkgo biloba]
          Length = 779

 Score =  947 bits (2447), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/686 (68%), Positives = 544/686 (79%), Gaps = 30/686 (4%)

Query: 77  WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA 136
           WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +QQL+ A
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQLQNA 60

Query: 137 P-ATTDASCDSVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKATGTAVD 185
             ATTD SC+SVVT+ QH            RDA+ PAGLLSIAEETL EFLSKATGTAV+
Sbjct: 61  SIATTDTSCESVVTSGQHQQQNHLTARHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVE 119

Query: 186 WVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEV 245
           W+QMPGMKPGPDS+GI AIS  C+GVAARACGLV +EPTK+AEILKDRPSWFRDCR ++V
Sbjct: 120 WIQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGIEPTKVAEILKDRPSWFRDCRCVDV 179

Query: 246 FTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPN 305
            T F  GN GT+ELLY Q YAPTTLA ARDFWTLRYT+ L++GSLVVCERSLSG+  GP+
Sbjct: 180 LTAFSTGNGGTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQGGPS 239

Query: 306 PASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM 365
                 FVRAEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+M
Sbjct: 240 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKM 299

Query: 366 TIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDG 415
           T+A          E S +VV G GRQPA LRTFSQRL +GFN+AVNGF DDGWSLM  DG
Sbjct: 300 TMAALRHLRQIAQEVSCDVVLGWGRQPAALRTFSQRLGKGFNEAVNGFTDDGWSLMGNDG 359

Query: 416 AEDVIIAVNSTKSLSTASNPTNSLAF---LGGILCAKASMLLQNVPPALLVRFLREHRSE 472
            +DV I +NS+ +    S   +S  F    GGILCAKASMLLQNVPPALLVRFLREHRSE
Sbjct: 360 TDDVTILINSSPNKILGSQLASSEGFPALGGGILCAKASMLLQNVPPALLVRFLREHRSE 419

Query: 473 WADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQ 532
           WAD N+DAYSAA+LKA   + P  R   F G Q+I+PL HT+EHEE LEVI+LEG+ L Q
Sbjct: 420 WADSNIDAYSAAALKASPCSVPSSRIGGFGGGQVILPLAHTVEHEEFLEVIKLEGNGLTQ 479

Query: 533 EDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPD 592
           E+A +SR++ LLQ+CSGVDENAVGAC+ELVFAPID  F D+ PLLPSGFR+IPLDS    
Sbjct: 480 EEALLSREMFLLQLCSGVDENAVGACAELVFAPIDASFADNAPLLPSGFRVIPLDSGV-- 537

Query: 593 TPDTLTAHRTLDLTSSLEVGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
             D  + +RTLDL S+LE+GPA    +GD   +  + RSVLTIAFQF +E +L++NVA+M
Sbjct: 538 --DGSSPNRTLDLASALEIGPAGTRVSGDYGGNSGNLRSVLTIAFQFTYEDHLRENVASM 595

Query: 652 ARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLR 711
           ARQYVRSV++SVQRVAMA+ PS LS  LGP+  PG+PEALTLA WIC SY +HLG ELLR
Sbjct: 596 ARQYVRSVVASVQRVAMALAPSRLSSHLGPRPPPGTPEALTLARWICHSYRFHLGVELLR 655

Query: 712 SDSVGGDSVLKNLWQHSDAILCCSLK 737
           ++    +SVLK LW HSDAI+CCSLK
Sbjct: 656 ANCEANESVLKMLWHHSDAIICCSLK 681


>gi|356526091|ref|XP_003531653.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 843

 Score =  943 bits (2438), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/745 (64%), Positives = 570/745 (76%), Gaps = 46/745 (6%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +DNGKYVRYT EQVEALER+Y +CPKPSS+RR QLIRECP LS+I+PKQIKVWFQNRRCR
Sbjct: 15  MDNGKYVRYTPEQVEALERLYHDCPKPSSIRRLQLIRECPTLSHIDPKQIKVWFQNRRCR 74

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ---QLRTAPATTD 141
           EKQRKE+SRLQ VNRKLTAMNKLLMEE DRLQKQVSQLV ENGY +Q   Q     A  D
Sbjct: 75  EKQRKESSRLQAVNRKLTAMNKLLMEEIDRLQKQVSQLVYENGYFRQHTTQNTKQQAIKD 134

Query: 142 ASCDSVVTT-------PQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP 194
            SC+S V +        QH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKP
Sbjct: 135 TSCESAVRSGQQHNLITQHPPRDAS-PAGLLSIAEETLEEFLSKATGTAVEWVQMPGMKP 193

Query: 195 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNA 254
           GPDS+GI AIS  C+GVAARACGLV LEPT++AEILKDRP WFRDCR+++V  + P  N 
Sbjct: 194 GPDSIGIVAISHGCNGVAARACGLVGLEPTRVAEILKDRPLWFRDCRAVDVLNVLPTANG 253

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           GTIELLY Q YAPTTLAPARDFW LRYT+ L++ SLV+CERSL  +  GP+      FVR
Sbjct: 254 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDSSLVICERSLKNTQNGPSMPPVQHFVR 313

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ 368
           AEMLPSG LIRPC+GGGSIIHIVDH+NLE WSVPEVLRPLYESSKV++Q+ T+A      
Sbjct: 314 AEMLPSGYLIRPCEGGGSIIHIVDHMNLEPWSVPEVLRPLYESSKVLSQKTTMAALRHLR 373

Query: 369 ----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
               E S   V G GR+P+ LR  SQRLSRGFN+A+NGF D+GW+ +  DG +DV I VN
Sbjct: 374 QISHEVSPSNVSGWGRRPSALRALSQRLSRGFNEALNGFTDEGWTTIGNDGVDDVTILVN 433

Query: 425 STKSLSTASNPTNSLAFLGG-------ILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
           S+       N    L+F  G       +LCAKASMLLQNV PA+L+RFLREHRSEWAD N
Sbjct: 434 SSPDKLMGLN----LSFANGFPSVSNAVLCAKASMLLQNVHPAILLRFLREHRSEWADNN 489

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
           +DAY+AA++K G  ++ G R   + G Q+I+PL HTIEHEE LEVI+LEG + + +D  +
Sbjct: 490 MDAYTAAAIKVGPCSFSGSRVGNY-GGQVILPLAHTIEHEEFLEVIKLEGVAHSPDDTIM 548

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS-KTPDTPDT 596
            R++ LLQ+CSG+DENAVG C+EL+ APID  F DD PLLPSGFRIIPL+S K   +P+ 
Sbjct: 549 PREMFLLQLCSGMDENAVGTCAELISAPIDASFADDAPLLPSGFRIIPLESGKEASSPN- 607

Query: 597 LTAHRTLDLTSSLEVGPATNPA----AGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMA 652
               RTLDL SSL+VGP+ N A    AG+SS   + RSV+TIAF+F FES++Q++VA MA
Sbjct: 608 ----RTLDLASSLDVGPSGNRASDECAGNSS---YMRSVMTIAFEFAFESHMQEHVAAMA 660

Query: 653 RQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRS 712
           RQYVRS+ISSVQRV +A+ PS LS   G +   G+PEA TLAHWIC SY  +LG ELL+S
Sbjct: 661 RQYVRSIISSVQRVGLALSPSHLSSHAGLRSPLGTPEAQTLAHWICNSYRCYLGVELLKS 720

Query: 713 DSVGGDSVLKNLWQHSDAILCCSLK 737
           ++ G +S+LK+LW HSDAILCC+LK
Sbjct: 721 NNEGNESLLKSLWHHSDAILCCTLK 745


>gi|349500387|dbj|BAL02986.1| class III homeodomain-leucine zipper protein, partial [Gnetum
           parvifolium]
          Length = 705

 Score =  942 bits (2434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/696 (68%), Positives = 547/696 (78%), Gaps = 36/696 (5%)

Query: 72  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ 131
            QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+Q
Sbjct: 1   NQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQ 60

Query: 132 QLRTAP--ATTDASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATG 181
           QL  A   A  D SC+SVVT        TPQH  RDA+ PAGLLSIAEETL EFLSKA G
Sbjct: 61  QLHNAASVAGADTSCESVVTSGQHQPNPTPQHPPRDAS-PAGLLSIAEETLTEFLSKAKG 119

Query: 182 TAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCR 241
            AVDWVQMPGMKPGPDS+GI AIS +C+GVAARACGLV LEPTK+AEILKDRPSW RDCR
Sbjct: 120 AAVDWVQMPGMKPGPDSIGIVAISNTCTGVAARACGLVGLEPTKVAEILKDRPSWLRDCR 179

Query: 242 SLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSG 301
            LEV T +P GN GTIE+LY Q YAPT    ARDFW+LRYTT LD+GSLVVCERSLS + 
Sbjct: 180 CLEVMTAYPTGNGGTIEVLYMQTYAPTINLSARDFWSLRYTTVLDDGSLVVCERSLSSTL 239

Query: 302 AGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVV 361
           AG    S A FVRAEMLPSG +I+PC+GGGSII IVDH +LE WSVPEVLRPLYESS ++
Sbjct: 240 AGQVLPSVANFVRAEMLPSGYIIQPCEGGGSIIRIVDHFDLEPWSVPEVLRPLYESSTIL 299

Query: 362 AQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLM 411
           AQ+MTIA          E+SGEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF D+GWS+M
Sbjct: 300 AQKMTIAAMRRLRQIAQESSGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFADEGWSIM 359

Query: 412 -TCDGA-EDVIIAVNS--TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR 467
            T DG+ EDV I++NS  TK  S A+   +     GGILCAK+SMLLQNVPPALL+RFLR
Sbjct: 360 TTADGSVEDVTISINSSPTKHASAAAAAFSVFGSGGGILCAKSSMLLQNVPPALLIRFLR 419

Query: 468 EHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEG 527
           EHRSEWAD N+DAYSAA++K+  +  PG R   F+GSQ+I+PL HT+E+EE LEVI+L+G
Sbjct: 420 EHRSEWADSNIDAYSAAAIKSSPFTIPGTRAGSFSGSQVILPLAHTVENEEFLEVIKLDG 479

Query: 528 HSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLD 587
           H LA EDA +SRD+ LLQ+CSGVDE+A G C+ELV APIDE F DD PLLPSGFR+IPL+
Sbjct: 480 HGLAHEDALLSRDMFLLQLCSGVDESAAGGCAELVLAPIDESFADDAPLLPSGFRVIPLE 539

Query: 588 SKTPDTPDTLTAHRTLDLTSSLEVG-----PATNPAAGDSSSCHHTRSVLTIAFQFPFES 642
           S++ D+P    A RTLDL S+LEVG      + N   G + +  + RSVLTIAFQF +ES
Sbjct: 540 SRS-DSPGA-NAGRTLDLASALEVGSGASRASNNSEGGAAGTNSNVRSVLTIAFQFSYES 597

Query: 643 NLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYS 702
           +L++NVA MARQYVRSV +SVQRVAMA+ PS     L P+  PG PEALTLA WICQSY 
Sbjct: 598 HLRENVAAMARQYVRSVAASVQRVAMALSPS----RLAPRPPPGGPEALTLARWICQSYR 653

Query: 703 YHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKV 738
            H+G +L R D   GDSVLK LW HS+AI+CCSLKV
Sbjct: 654 LHVGVDLFRGDGEAGDSVLKLLWHHSEAIVCCSLKV 689


>gi|38198211|dbj|BAD01502.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 838

 Score =  939 bits (2427), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/742 (66%), Positives = 564/742 (76%), Gaps = 44/742 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 14  MDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 73

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT-APATTDAS 143
           EKQRKEASRLQ+VNRKLTAMNKLLMEENDRLQKQVS LV ENG  +Q  +  A AT D S
Sbjct: 74  EKQRKEASRLQSVNRKLTAMNKLLMEENDRLQKQVSHLVYENGCFRQHTQNGALATKDTS 133

Query: 144 CDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
           C+SVVT      TPQH   DA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 134 CESVVTSGQRHLTPQHPPGDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 192

Query: 198 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTI 257
           S+GI +IS  C+GVAARACGLVSLEPT++AEILKDR SW+RDCR+++V  + P  N GTI
Sbjct: 193 SIGIVSISHGCTGVAARACGLVSLEPTRVAEILKDRTSWYRDCRAVDVLDVLPTANGGTI 252

Query: 258 ELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEM 317
           ELLY Q YAPTTLA  RDF  LRYT+ +++GSLVVCERSL+ +  G +  S   FVRAEM
Sbjct: 253 ELLYMQLYAPTTLATGRDFLLLRYTSVIEDGSLVVCERSLANTPNGQSIPSVPNFVRAEM 312

Query: 318 LPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------- 368
           LPSG LIRPC+GGGSIIHIVDH+NLEAWSVPEVLRPLYESS V+AQ+ T+          
Sbjct: 313 LPSGYLIRPCEGGGSIIHIVDHMNLEAWSVPEVLRPLYESSTVIAQKTTMMALRQLRQIA 372

Query: 369 -ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
            E S       GR+PA LR  SQRLSRGFN+AVNGF D+GWSL + DG +DV I VNS+ 
Sbjct: 373 QEVSQTNTPNWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSLTSNDGMDDVTIHVNSSP 432

Query: 428 SLSTASNPTNSLAFLGG-------ILCAKASMLL-QNVPPALLVRFLREHRSEWAD-FNV 478
                 N    L+F  G       +LCAKASMLL  NVPPALL+RFLREHRSEWAD  NV
Sbjct: 433 EKLMGLN----LSFSNGYPSLNTAVLCAKASMLLPPNVPPALLLRFLREHRSEWADNNNV 488

Query: 479 DAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVS 538
           DAYSAA++K G  +  G R   F G Q+I+PL  TIEHEELLEVI+LEG  L  EDA + 
Sbjct: 489 DAYSAAAVKLGPCSLLGTRAGNF-GGQVILPLAQTIEHEELLEVIKLEGVGLCPEDALMG 547

Query: 539 RDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLT 598
           RD+  LQ+CSG+DENAVG CSEL+FAPID  F DD PLLPSGFRI+PLDS   D+    +
Sbjct: 548 RDMFFLQLCSGIDENAVGMCSELIFAPIDASFADDAPLLPSGFRIMPLDSCKGDS----S 603

Query: 599 AHRTLDLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
            +RTLDL S+LEV  A N AAGD    +SC   RSV+TIA +F FES++Q++VA MARQY
Sbjct: 604 PNRTLDLASALEVRGAANKAAGDRNVGNSC--ARSVMTIALEFAFESHMQESVAAMARQY 661

Query: 656 VRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSV 715
           VRS+ISSVQRVA A+ P   SP  G +   G+PEA TLA WI  SY  +LGAELL     
Sbjct: 662 VRSIISSVQRVASALSP---SPNGGLQSPLGTPEAHTLARWISHSYRCYLGAELLEGVGE 718

Query: 716 GGDSVLKNLWQHSDAILCCSLK 737
           G DS+LK++W HSDAI+CCSLK
Sbjct: 719 GSDSILKSMWHHSDAIVCCSLK 740


>gi|18076738|emb|CAC84276.1| HD-Zip protein [Zinnia violacea]
          Length = 838

 Score =  938 bits (2424), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/742 (66%), Positives = 564/742 (76%), Gaps = 44/742 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 14  MDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 73

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT-APATTDAS 143
           EKQRKEASRLQ+VNRKLTAMNKLLMEENDRLQKQVS LV ENG  +Q  +  A AT D S
Sbjct: 74  EKQRKEASRLQSVNRKLTAMNKLLMEENDRLQKQVSHLVYENGCFRQHTQNGALATKDTS 133

Query: 144 CDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
           C+SVVT      TPQH   DA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 134 CESVVTSGQRHLTPQHPPGDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 192

Query: 198 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTI 257
           S+GI +IS  C+GVAARACGLVSLEPT++AEILKDR SW+RDCR+++V  + P  N GTI
Sbjct: 193 SIGIVSISHGCTGVAARACGLVSLEPTRVAEILKDRTSWYRDCRAVDVLDVLPTANGGTI 252

Query: 258 ELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEM 317
           ELLY Q YAPTTLA  RDF  LRYT+ +++GSLVVCERSL+ +  G +  S   FVRAEM
Sbjct: 253 ELLYMQLYAPTTLATGRDFLLLRYTSVIEDGSLVVCERSLANTPNGQSIPSVPNFVRAEM 312

Query: 318 LPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------- 368
           LPSG LIRPC+GGGSIIHIVDH+NLEAWSVPEVLRPLYESS V+AQ+ T+          
Sbjct: 313 LPSGYLIRPCEGGGSIIHIVDHMNLEAWSVPEVLRPLYESSTVIAQKTTMMALRQLRQIA 372

Query: 369 -ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
            E S       GR+PA LR  SQRLSRGFN+AVNGF D+GWSL + DG +DV I VNS+ 
Sbjct: 373 QEVSQTNTPNWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSLTSNDGMDDVTIHVNSSP 432

Query: 428 SLSTASNPTNSLAFLGG-------ILCAKASMLL-QNVPPALLVRFLREHRSEWAD-FNV 478
                 N    L+F  G       +LCAKASMLL  NVPPALL+RFLREHRSEWAD  NV
Sbjct: 433 EKLMGLN----LSFSNGYPSLNTAVLCAKASMLLPPNVPPALLLRFLREHRSEWADNNNV 488

Query: 479 DAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVS 538
           DAYSAA++K G  +  G R   F G Q+I+PL  TIEHEELLEVI+LEG  L  EDA + 
Sbjct: 489 DAYSAAAVKLGPCSLLGTRAGNF-GGQVILPLAQTIEHEELLEVIKLEGVGLCPEDALMG 547

Query: 539 RDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLT 598
           RD+  LQ+CSG+DENAVG CSEL+FAPID  F DD PLLPSGFRI+PLDS   D+    +
Sbjct: 548 RDMFFLQLCSGIDENAVGMCSELIFAPIDASFADDAPLLPSGFRIMPLDSCKGDS----S 603

Query: 599 AHRTLDLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
            +RTLDL S+LEV  A N AAGD    +SC   RSV+TIA +F FES++Q++VA MARQY
Sbjct: 604 PNRTLDLASALEVRGAANKAAGDRNVGNSC--ARSVMTIALEFAFESHMQESVAAMARQY 661

Query: 656 VRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSV 715
           VRS+ISSVQRVA A+ P   SP  G +   G+PEA TLA WI  SY  +LGAELL     
Sbjct: 662 VRSIISSVQRVASALSP---SPNGGLQSPLGTPEAHTLARWISHSYRCYLGAELLEGVGE 718

Query: 716 GGDSVLKNLWQHSDAILCCSLK 737
           G DS+LK++W HSDAI+CCSLK
Sbjct: 719 GSDSILKSMWHHSDAIVCCSLK 740


>gi|297798676|ref|XP_002867222.1| ATHB-8 [Arabidopsis lyrata subsp. lyrata]
 gi|297313058|gb|EFH43481.1| ATHB-8 [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score =  937 bits (2422), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/743 (64%), Positives = 575/743 (77%), Gaps = 36/743 (4%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS N H +DNGKYVRYT EQVEALER+Y++CPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 3   GSNNSHNIDNGKYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVW 62

Query: 78  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ--QLRT 135
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LV EN Y +Q  Q + 
Sbjct: 63  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSYFRQHPQNQG 122

Query: 136 APATTDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
             ATTD SC+SVVT      TPQH  RDA+ PAGLLSIA+ETL EF+SKATGTAV+WVQM
Sbjct: 123 NLATTDNSCESVVTSGQHHLTPQHQPRDAS-PAGLLSIADETLTEFISKATGTAVEWVQM 181

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
           PGMKPGPDS+GI AIS  C+G+AARACGLV L+PT++AEILKD+P W RDCRSL++  + 
Sbjct: 182 PGMKPGPDSIGIVAISHGCTGIAARACGLVGLDPTRVAEILKDKPCWLRDCRSLDIVNVL 241

Query: 250 PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA 309
              N GT+EL+Y Q YAPTTLAPARDFW LRYT+ +++GSLV+CERSL+ +  GP+   +
Sbjct: 242 STANGGTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGPSMPPS 301

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA- 368
             FVRAE+LPSG LIRPC+GGGSI+HIVDH +LE WSVPEVLR LYESS ++AQR T+A 
Sbjct: 302 PHFVRAEILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRTTMAA 361

Query: 369 ---------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                    E S   V G GR+PA LR  SQRLS+GFN+AVNGF+D+GWS++  DG +DV
Sbjct: 362 LRYLRQISQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFSDEGWSILESDGIDDV 421

Query: 420 IIAVNS--TKSLSTASNP-TNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWAD 475
            + VNS  TK + T+S P  N    +   +LCAKASMLLQNVPP++L+RFLREHR EWAD
Sbjct: 422 TLLVNSSPTKMMMTSSLPFANGFTSMPSAVLCAKASMLLQNVPPSILLRFLREHRQEWAD 481

Query: 476 FNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDA 535
            ++DAYSAA++KAG  + P  RP  F G Q+I+PL HTIE+EE +EVI+LE     QED 
Sbjct: 482 NSIDAYSAAAIKAGPCSLPIPRPGSF-GGQVILPLAHTIENEEFMEVIKLESLGHYQEDM 540

Query: 536 FVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPD 595
            +  DI LLQ+CSGVDENAV +C+EL+FAPID  F DD P++PSGFRIIPLDSK+    +
Sbjct: 541 MMPADIFLLQMCSGVDENAVESCAELIFAPIDASFSDDAPIIPSGFRIIPLDSKS----E 596

Query: 596 TLTAHRTLDLTSSLEVGPATNPAAGDS-SSCHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
            L+ +RTLDL S+L+VG  T   AGDS  S  +++SV+TIAFQ  FE ++Q+NVA+MARQ
Sbjct: 597 GLSPNRTLDLASALDVGSRT---AGDSCGSRGNSKSVMTIAFQLAFEMHMQENVASMARQ 653

Query: 655 YVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS 714
           YVRSVI+SVQRVA+A+ PS    + G +  P SPEA TLA WI  SY  +LG +LL+   
Sbjct: 654 YVRSVIASVQRVALALSPSSHQLS-GLRPPPASPEAHTLARWISHSYRCYLGVDLLKPH- 711

Query: 715 VGGDSVLKNLWQHSDAILCCSLK 737
             G  +LK+LW H DA++CCSLK
Sbjct: 712 --GTDLLKSLWHHPDAVMCCSLK 732


>gi|15233969|ref|NP_195014.1| homeobox-leucine zipper protein ATHB-8 [Arabidopsis thaliana]
 gi|75220729|sp|Q39123.1|ATHB8_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-8; AltName:
           Full=HD-ZIP protein ATHB-8; AltName: Full=Homeodomain
           transcription factor ATHB-8
 gi|1149569|emb|CAA90703.1| HD-zip [Arabidopsis thaliana]
 gi|7270235|emb|CAB80005.1| HD-zip transcription factor (athb-8) [Arabidopsis thaliana]
 gi|20152536|emb|CAD29660.1| homeodomain-leucine zipper protein 8 [Arabidopsis thaliana]
 gi|20466330|gb|AAM20482.1| HD-zip transcription factor (athb-8) [Arabidopsis thaliana]
 gi|31711762|gb|AAP68237.1| At4g32880 [Arabidopsis thaliana]
 gi|332660738|gb|AEE86138.1| homeobox-leucine zipper protein ATHB-8 [Arabidopsis thaliana]
          Length = 833

 Score =  937 bits (2421), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/743 (63%), Positives = 574/743 (77%), Gaps = 36/743 (4%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS N H +DNGKYVRYT EQVEALER+Y++CPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 4   GSNNSHNMDNGKYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVW 63

Query: 78  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ--QLRT 135
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LV EN Y +Q  Q + 
Sbjct: 64  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSYFRQHPQNQG 123

Query: 136 APATTDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
             ATTD SC+SVVT      TPQH  RDA+ PAGLLSIA+ETL EF+SKATGTAV+WVQM
Sbjct: 124 NLATTDTSCESVVTSGQHHLTPQHQPRDAS-PAGLLSIADETLTEFISKATGTAVEWVQM 182

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
           PGMKPGPDS+GI AIS  C+G+AARACGLV L+PT++AEILKD+P W RDCRSL++  + 
Sbjct: 183 PGMKPGPDSIGIVAISHGCTGIAARACGLVGLDPTRVAEILKDKPCWLRDCRSLDIVNVL 242

Query: 250 PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA 309
              N GT+EL+Y Q YAPTTLAPARDFW LRYT+ +++GSLV+CERSL+ +  GP+   +
Sbjct: 243 STANGGTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGPSMPPS 302

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA- 368
             FVRAE+LPSG LIRPC+GGGSI+HIVDH +LE WSVPEVLR LYESS ++AQR T+A 
Sbjct: 303 PHFVRAEILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRTTMAA 362

Query: 369 ---------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                    E S   V G GR+PA LR  SQRLS+GFN+AVNGF+D+GWS++  DG +DV
Sbjct: 363 LRYLRQISQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFSDEGWSILESDGIDDV 422

Query: 420 IIAVNS--TKSLSTASNP--TNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWAD 475
            + VNS  TK + T+S P      +    +LCAKASMLLQNVPP++L+RFLREHR EWAD
Sbjct: 423 TLLVNSSPTKMMMTSSLPFANGYTSMPSAVLCAKASMLLQNVPPSILLRFLREHRQEWAD 482

Query: 476 FNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDA 535
            ++DAYSAA++KAG  + P  RP  F G Q+I+PL HTIE+EE +EVI+LE     QED 
Sbjct: 483 NSIDAYSAAAIKAGPCSLPIPRPGSF-GGQVILPLAHTIENEEFMEVIKLESLGHYQEDM 541

Query: 536 FVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPD 595
            +  DI LLQ+CSGVDENAV +C+EL+FAPID  F DD P++PSGFRIIPLDSK+    +
Sbjct: 542 MMPADIFLLQMCSGVDENAVESCAELIFAPIDASFSDDAPIIPSGFRIIPLDSKS----E 597

Query: 596 TLTAHRTLDLTSSLEVGPATNPAAGDS-SSCHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
            L+ +RTLDL S+L+VG  T   AGDS  S  +++SV+TIAFQ  FE ++Q+NVA+MARQ
Sbjct: 598 GLSPNRTLDLASALDVGSRT---AGDSCGSRGNSKSVMTIAFQLAFEMHMQENVASMARQ 654

Query: 655 YVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS 714
           YVRSVI+SVQRVA+A+ PS    + G +  P SPEA TLA WI  SY  +LG +LL+   
Sbjct: 655 YVRSVIASVQRVALALSPSSHQLS-GLRPPPASPEAHTLARWISHSYRCYLGVDLLKPH- 712

Query: 715 VGGDSVLKNLWQHSDAILCCSLK 737
             G  +LK+LW H DA++CCSLK
Sbjct: 713 --GTDLLKSLWHHPDAVMCCSLK 733


>gi|414864316|tpg|DAA42873.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 602

 Score =  927 bits (2395), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/587 (74%), Positives = 501/587 (85%), Gaps = 11/587 (1%)

Query: 15  SSSGSINK-HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           S SG  +K   +D+GKYVRYT EQVE LER+Y +CPKPSS RRQQL+RECPILSNIEPKQ
Sbjct: 12  SDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQ 71

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           IKVWFQNRRCR+KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL
Sbjct: 72  IKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQL 131

Query: 134 RTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           +      D SC+S VT P +++RDA+NP+GLL+IAEET  EFLSKATGTA+DWVQMPGMK
Sbjct: 132 QNTSLANDTSCESNVTAPPNAIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 191

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDSVGI AIS  C GVAARACGLV+LEPTK+ EILKDRPSWFRDCRSLEVFTMFPAGN
Sbjct: 192 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSWFRDCRSLEVFTMFPAGN 251

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+Y Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSL+GSG GPN ASA QFV
Sbjct: 252 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQFV 311

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEMLPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT       
Sbjct: 312 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 371

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV++A 
Sbjct: 372 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVVAC 431

Query: 424 NSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSA 483
           NSTK +   SN   +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A
Sbjct: 432 NSTKKIRNNSNAGITFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLA 491

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
           +SLK  + + PG+RP RF+G Q+IMPL HT+E+EE+LEV+RLEG  L  ++A +SRDIHL
Sbjct: 492 SSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHL 551

Query: 544 LQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
           LQ+C+G+DE +VG+  +LVFAPIDE FPDD PL+ SGFR+IPLD KT
Sbjct: 552 LQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDMKT 598


>gi|357448489|ref|XP_003594520.1| Homeobox-leucine zipper protein ATHB-14 [Medicago truncatula]
 gi|355483568|gb|AES64771.1| Homeobox-leucine zipper protein ATHB-14 [Medicago truncatula]
          Length = 823

 Score =  926 bits (2393), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/747 (63%), Positives = 560/747 (74%), Gaps = 64/747 (8%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           ++D GKYVRYT EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR  
Sbjct: 8   EMDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR-- 65

Query: 84  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPA----T 139
                             + ++ L++     + KQVS LV ENGYMKQQ+ T  A    T
Sbjct: 66  ------------------SFLHLLVIV----VTKQVSHLVYENGYMKQQIHTVSASAATT 103

Query: 140 TDASCDSVVTTPQHSL--------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           TD SCDSVV + Q+          RDANNPAGLL++AEETLAEFLSKATGTAVDWVQM G
Sbjct: 104 TDNSCDSVVMSGQNQQQNPTQRPQRDANNPAGLLAVAEETLAEFLSKATGTAVDWVQMIG 163

Query: 192 MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA 251
           MKPGP+S+GI A+S++ SG+AARACGLVSLEPTK+AEILKDR SW+RDCR ++V ++ P 
Sbjct: 164 MKPGPESIGIVAVSRNSSGIAARACGLVSLEPTKVAEILKDRLSWYRDCRCVDVLSIVPT 223

Query: 252 GNAGTIELLYTQAYAPTT---------LAPARDFWTLRYTTTLDNGSLVVCERSLSGSGA 302
           G  GTIEL+Y Q    +T         L  +RDFWTLRYTT+L++GSLV+CERSL+ S  
Sbjct: 224 GGGGTIELMYMQVLFYSTKELTMPFLFLLTSRDFWTLRYTTSLEDGSLVICERSLNASTG 283

Query: 303 GPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA 362
           GP   S + FVRAEMLPSG LIRPC+GGGSIIHIVDH++L+ WSVPEVLRPLYESSK++A
Sbjct: 284 GPTGPSPSNFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILA 343

Query: 363 QRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMT 412
           Q++TIA          E+SGE+ YG GRQPAVLRTFSQRL RGFNDAVNGF DDGWSL+ 
Sbjct: 344 QKLTIAALQHIKQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLLG 403

Query: 413 CDGAEDVIIAVNSTKSLSTASNPTNSL-AFLGGILCAKASMLLQNVPPALLVRFLREHRS 471
            DG EDV IAVNS+ +    SN ++    F GG+LCAKASMLLQNVPPALLVRFLREHRS
Sbjct: 404 NDGVEDVTIAVNSSPNKFLGSNYSSMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRS 463

Query: 472 EWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLA 531
           EWAD+ VDAYSA  LK+  YA P  RP  F  SQ+I+PL  TIEHEE LEV+R+EGH+ +
Sbjct: 464 EWADYGVDAYSATCLKSSPYAVPCPRPGGFPSSQVILPLAPTIEHEEFLEVVRIEGHAFS 523

Query: 532 QEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTP 591
            ED  ++RD++LLQ+CSG+DEN+VGAC++LVFAPIDE F DD  LLPSGFR+IPLD K+ 
Sbjct: 524 PEDVALARDMYLLQLCSGIDENSVGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKS- 582

Query: 592 DTPDTLTAHRTLDLTSSLEVGPATNPAA-GDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
              D  T  RTLDL   LE      P+  G  S+ ++ RSVLTIAFQF FE++L+DNVA+
Sbjct: 583 ---DGPTTSRTLDL---LEGSRNARPSGEGAGSNGYNLRSVLTIAFQFTFENHLRDNVAS 636

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELL 710
           MARQYVRSV++SVQRVAMAI PS     LGPK  PGSPEA  LA WI +SY  H GAEL 
Sbjct: 637 MARQYVRSVVASVQRVAMAIAPSRPGTQLGPKSLPGSPEAHALARWISRSYRMHTGAELF 696

Query: 711 RSDSVGGDSVLKNLWQHSDAILCCSLK 737
           R +S   D++LK LW HSDAI+CCS+K
Sbjct: 697 RVESAASDAILKQLWHHSDAIMCCSVK 723


>gi|24417147|dbj|BAC22512.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 836

 Score =  910 bits (2351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/735 (62%), Positives = 547/735 (74%), Gaps = 33/735 (4%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +DNGKYVRYT EQVEALER+Y +CPKPSS RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 15  MDNGKYVRYTPEQVEALERLYHDCPKPSSHRRQQLIRECPILSNIEPKQIKVWFQNRRCR 74

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT-APATTDAS 143
           EKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVS LV EN + +QQ +  A  TTD S
Sbjct: 75  EKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSNLVYENSHFRQQTQNMALVTTDTS 134

Query: 144 CDSVVTT------PQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
           C+SVVT+      PQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 135 CESVVTSGQHHSSPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 193

Query: 198 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTI 257
           S+GI AIS  C+GVA+RACGLV LEPT++AEILKDRPSW+RDCR+++V  +   G   TI
Sbjct: 194 SIGIIAISHGCTGVASRACGLVGLEPTRVAEILKDRPSWYRDCRAVDVLNVLTTGTNRTI 253

Query: 258 ELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEM 317
           ELLY Q YAPTTLAPARDFW LRYT+ L++GSLVVCERSL+ +  GP       FVRA++
Sbjct: 254 ELLYMQLYAPTTLAPARDFWLLRYTSALEDGSLVVCERSLNNTQNGPTMPPVPHFVRAKI 313

Query: 318 LPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------- 368
           LPSG LIRPCDGGGSIIHIVDH++ EA SVPEVLRPLYESS ++AQR T+A         
Sbjct: 314 LPSGYLIRPCDGGGSIIHIVDHVDFEAGSVPEVLRPLYESSTLLAQRTTLAAFRQLRQIS 373

Query: 369 -ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
            E S   V   GR+PA LR  +QR+SRGFN+A+NG ND+GW++M  DG +DV + VNS+ 
Sbjct: 374 QEISQPAVTSWGRRPAALRALAQRMSRGFNEAINGLNDEGWTMMEGDGVDDVTVLVNSSP 433

Query: 428 SLSTASNPTNSLAFLG---GILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAA 484
                + P  +  F      +LCAKASMLLQNVPPA+L RFLREHRSEWAD ++D Y+A 
Sbjct: 434 DKVMGATPMFADGFPSISHAVLCAKASMLLQNVPPAILTRFLREHRSEWADSSIDCYAAT 493

Query: 485 SLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHS-LAQEDAFVSRDIHL 543
           S+K G+   P  R   F G Q+I+PL HTIEHEE +EVI+LE  S    ED  +  DI  
Sbjct: 494 SVKGGACGIPLARSGGF-GGQVILPLAHTIEHEEFMEVIKLENMSPYRAEDMLIPGDIFF 552

Query: 544 LQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTL 603
           LQ+C+GVDENA+G  +EL+FAPID  F DD PLLPSGFRIIPL++ + +         T 
Sbjct: 553 LQLCNGVDENAIGTSAELIFAPIDASFTDDAPLLPSGFRIIPLNNNSQNP--------TR 604

Query: 604 DLTSSLEVGPATNPAAGDS-SSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISS 662
           DL S+LEVGP    +  D       T+SV+TIAFQF FE +LQ+++A MARQYVRS+I+S
Sbjct: 605 DLASTLEVGPPGKRSPADYLGQSGSTKSVMTIAFQFAFEIHLQESIAAMARQYVRSIIAS 664

Query: 663 VQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLK 722
           VQRVA+A+ PS   P    + + G+PEA  LA WICQS+   LG +L +      D++LK
Sbjct: 665 VQRVALALSPSSFGPR-SLQSASGTPEAQMLARWICQSFRCFLGEDLFKMVDERSDTMLK 723

Query: 723 NLWQHSDAILCCSLK 737
            LW HSDAI+CCSLK
Sbjct: 724 TLWHHSDAIMCCSLK 738


>gi|255550932|ref|XP_002516514.1| DNA binding protein, putative [Ricinus communis]
 gi|223544334|gb|EEF45855.1| DNA binding protein, putative [Ricinus communis]
          Length = 782

 Score =  909 bits (2348), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/730 (65%), Positives = 559/730 (76%), Gaps = 51/730 (6%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           +K  +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQN
Sbjct: 14  SKIAMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQN 73

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--A 138
           RRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN Y +QQ + A   A
Sbjct: 74  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYFRQQTQNATNLA 133

Query: 139 TTDA--SCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMP 190
           TTD   SC+SVVT      TPQH  RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMP
Sbjct: 134 TTDTNTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMP 192

Query: 191 GMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFP 250
           GMKPGPDS+GI AIS  C GVAARACGLV LEPT++AEILKDRPSWFRDCR+++V     
Sbjct: 193 GMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNALS 252

Query: 251 AGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAA 310
            GN GTIELLY Q YAPTTLAPARDFW LRYT+ L++GSLV+CERSL+ +  GP+     
Sbjct: 253 TGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLNNTQNGPSMPPTQ 312

Query: 311 QFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAET 370
            FVRAEMLPSG LIRPC+GGGSIIHIVDH++LEA      LR L + S+ V+Q       
Sbjct: 313 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHVDLEA------LRHLRQISQEVSQ------- 359

Query: 371 SGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLS 430
               V G GR+PA LR  SQRLS+GFN+A+NGF D+G           V+ A N    L+
Sbjct: 360 --PNVSGWGRRPAALRALSQRLSKGFNEAINGFTDEG-----------VVHAGNKMMGLN 406

Query: 431 TASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGS 490
             S  +   A   G+LCAKASMLLQNVPPA+L+RFLREHRSEWAD  +DAY+AA++KAG 
Sbjct: 407 I-SYASGFPAMSNGVLCAKASMLLQNVPPAILLRFLREHRSEWADTGIDAYAAAAVKAGP 465

Query: 491 YAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGV 550
              P  R   F G Q+I+PL HTIEHEE +EVI+LE     +ED  +  DI LLQ+CSGV
Sbjct: 466 CTLPVARAGNF-GGQVILPLAHTIEHEEFMEVIKLENMGY-REDMIMPGDIFLLQLCSGV 523

Query: 551 DENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLE 610
           DENAVG C+ELVFAPID  F DD P++PSGFRIIPLDSK     D  + +RTLDL S+LE
Sbjct: 524 DENAVGTCAELVFAPIDASFSDDAPIIPSGFRIIPLDSKM----DVTSPNRTLDLASALE 579

Query: 611 VGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMA 669
           VGPA N A+GD    C  T+SV+TIAFQF FE +LQ+NVA+MARQYVRSVI+SVQRVA+A
Sbjct: 580 VGPAGNKASGDLPGHCGSTKSVMTIAFQFAFEIHLQENVASMARQYVRSVIASVQRVALA 639

Query: 670 ICPS--GLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQH 727
           + PS  G +P+L P   PG+PEA TL+ WICQSY  +LG ELL+++  G +S+LK+LW H
Sbjct: 640 LSPSRFGSNPSLRPP--PGTPEAHTLSSWICQSYRCYLGVELLKNE--GSESILKSLWHH 695

Query: 728 SDAILCCSLK 737
           +DA++CCSLK
Sbjct: 696 ADALMCCSLK 705


>gi|108705780|gb|ABF93575.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
          Length = 626

 Score =  902 bits (2330), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/576 (75%), Positives = 503/576 (87%), Gaps = 11/576 (1%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+GKYVRYT EQVEALERVY++CPKP+S RRQQL+RECPIL+NIEPKQIKVWFQNRRCR
Sbjct: 23  MDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCR 82

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL+  P   D SC
Sbjct: 83  DKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTPLANDTSC 142

Query: 145 DSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAI 204
           +S VTTPQ+ LRDA+NP+GLLSIAEETL EFLSKATGTA+DWVQMPGMKPGPDSVGI AI
Sbjct: 143 ESNVTTPQNPLRDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAI 202

Query: 205 SQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQA 264
           S  C GVAARACGLV+LEPTK+ EILKDRPSWFRDCR+LEVFTM PAGN GT+EL+YTQ 
Sbjct: 203 SHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCRNLEVFTMIPAGNGGTVELVYTQL 262

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
           YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GP+ ASA Q+VRAEMLPSG L+
Sbjct: 263 YAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVRAEMLPSGYLV 322

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEV 374
           RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT A          ETSGEV
Sbjct: 323 RPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEV 382

Query: 375 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
           VY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV+IA NSTK + + SN
Sbjct: 383 VYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDGVEDVVIACNSTKKIRSNSN 442

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYP 494
              +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A++LK  + +  
Sbjct: 443 AGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLASTLKTSACSLT 502

Query: 495 GMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENA 554
           G+RP RF+GSQII+PL HT+E+EE+LEV+RLEG  L  ++A +SRDIHLLQ+C+G+DE +
Sbjct: 503 GLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKS 562

Query: 555 VGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
           VG+  +LVFAPID+ FPD+ PL+ SGFR+IPLD KT
Sbjct: 563 VGSSFQLVFAPIDD-FPDETPLISSGFRVIPLDMKT 597


>gi|414871037|tpg|DAA49594.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 648

 Score =  901 bits (2328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/581 (74%), Positives = 494/581 (85%), Gaps = 14/581 (2%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K  +D GKYVRYT EQVEALERVY+ECPKPSS RRQQL+RECPILSNIE KQIKVWFQNR
Sbjct: 14  KSGMDTGKYVRYTPEQVEALERVYAECPKPSSARRQQLLRECPILSNIEAKQIKVWFQNR 73

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTD 141
           RCR+KQR E+SRLQ+VNRKLTAMNKLLMEEN+RLQKQVSQLV EN YMKQQL+     TD
Sbjct: 74  RCRDKQRNESSRLQSVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLATD 133

Query: 142 ASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGI 201
           ASC+S  TTP + LRDA+NP+GLL+IAEETL EFLSKATGTA+DWVQMPGMKPGPDS GI
Sbjct: 134 ASCESNATTPAN-LRDASNPSGLLAIAEETLTEFLSKATGTAIDWVQMPGMKPGPDSFGI 192

Query: 202 FAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLY 261
             IS    GVAARACGLV+LEPTKI EILKDRPSWFRDCRSLEV+TM PAGN GTIEL+Y
Sbjct: 193 VTISHGGRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVYTMLPAGNGGTIELVY 252

Query: 262 TQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSG 321
            Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG G + A+  QFVRAEMLPSG
Sbjct: 253 MQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGDGQSAATTQQFVRAEMLPSG 312

Query: 322 CLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETS 371
            L+R C+GGGSI+ IVDHL+L+AWSVPEVLRPLYESS+VVAQ+MT            ETS
Sbjct: 313 YLVRQCEGGGSIVRIVDHLDLDAWSVPEVLRPLYESSRVVAQKMTTTALRHLRQIAQETS 372

Query: 372 GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLST 431
           GEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDVIIA NS K + +
Sbjct: 373 GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMCGDGMEDVIIACNS-KKIRS 431

Query: 432 ASNPTNSLAF--LGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAG 489
           +SNP         GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N DAYSA++LK  
Sbjct: 432 SSNPATGFGAPGPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSASALKTS 491

Query: 490 SYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSG 549
             + PG+RP RF+GSQIIMPL HT+E+EE+LEV+RLEG +L  ++  +SRDIHLLQ+C+G
Sbjct: 492 PCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQTLTHDEGLLSRDIHLLQLCTG 551

Query: 550 VDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
           +DE ++G+C +LVFAPIDE+FPDD PL+ SGFR+IPLD KT
Sbjct: 552 MDEKSMGSCFQLVFAPIDELFPDDAPLVSSGFRVIPLDIKT 592


>gi|255564395|ref|XP_002523194.1| conserved hypothetical protein [Ricinus communis]
 gi|223537601|gb|EEF39225.1| conserved hypothetical protein [Ricinus communis]
          Length = 771

 Score =  899 bits (2324), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/607 (73%), Positives = 503/607 (82%), Gaps = 24/607 (3%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           +  Q+D+ KYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN
Sbjct: 15  SNKQMDSSKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 74

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT 140
           RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS LV ENGYM+QQL+TA ATT
Sbjct: 75  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMRQQLQTASATT 134

Query: 141 -DASCDSVVTT----------PQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
            D SC+SVV            PQH  RDANNPAGLL+IAEETLAEFLSKATGTAVDWVQM
Sbjct: 135 TDNSCESVVINGQQQQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQM 194

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
            GMKPGPDS+GI A+S++CSGVAARACGLVSLEPTK+AEILKDRPSWFRDCR L+  ++ 
Sbjct: 195 IGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCRCLDTLSVI 254

Query: 250 PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA 309
           P GN GTIEL+Y Q YAPTTLA AR+FWTLRYTTTL++GSLV+CERSL+ +  GP    A
Sbjct: 255 PTGNGGTIELIYMQTYAPTTLAAAREFWTLRYTTTLEDGSLVICERSLTTTTGGPTGPPA 314

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA- 368
           + FVRAEMLPSG LIRPC+GGGSIIHIVDH++L+AWSVPEVLRPLYESSK++AQ+MT+A 
Sbjct: 315 SSFVRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTMAA 374

Query: 369 ---------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                    ETSGE+ YG GRQPAVLRTFSQRL RGFNDAVNGF+DDGWSL+  DG EDV
Sbjct: 375 LRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFSDDGWSLLGGDGVEDV 434

Query: 420 IIAVNSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
            I +NST +    S  T S+   F GG+LCAKASMLLQNVPPALLVRFLREHRSEWAD+ 
Sbjct: 435 TIVINSTPNKFLGSQYTTSMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYG 494

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
           VD YSAA LKA  YA P  RP  F  SQ+I+PL HT+EHEE LEV+RLEGH+ + ED  +
Sbjct: 495 VDTYSAACLKASPYAVPCARPGGFPSSQVILPLAHTVEHEEFLEVVRLEGHAFSPEDVAL 554

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPD-TPDT 596
           +RD++LLQ+CSGVDENAVGAC++LVFAPIDE F DD PLLPSGFR+IPLD KT    P  
Sbjct: 555 ARDMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKTDGPAPTP 614

Query: 597 LTAHRTL 603
           +T  + +
Sbjct: 615 MTVEKVM 621



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 50/107 (46%), Gaps = 11/107 (10%)

Query: 642 SNLQDNVATMARQYVRSVISSVQRVAMAICPSG-----LSP-TLGPKLSPGSPEALT--- 692
           S + +N      Q V + I         + PSG     L P T GP  +P + E +    
Sbjct: 565 SGVDENAVGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKTDGPAPTPMTVEKVMHCY 624

Query: 693 --LAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
             + H+       H G EL R D   GD++LK LW HSDAI+CCSLK
Sbjct: 625 TQVCHFQWHYLVIHTGGELFRVDPQAGDALLKQLWHHSDAIMCCSLK 671


>gi|242051699|ref|XP_002454995.1| hypothetical protein SORBIDRAFT_03g002660 [Sorghum bicolor]
 gi|241926970|gb|EES00115.1| hypothetical protein SORBIDRAFT_03g002660 [Sorghum bicolor]
          Length = 844

 Score =  897 bits (2317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/739 (61%), Positives = 557/739 (75%), Gaps = 38/739 (5%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           KYVRYT EQVEALER+Y ECPKPSSLRRQQL+R+CP+L++++PKQIKVWFQNRRCREKQR
Sbjct: 16  KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRDCPVLASVDPKQIKVWFQNRRCREKQR 75

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--ATTDASCDS 146
           KE+SRLQ +NRKLTAMNKLLMEENDRLQKQVSQLV ENGY +QQ + +   ATTD SC+S
Sbjct: 76  KESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYENGYYRQQTQQSAGLATTDTSCES 135

Query: 147 VVTTPQHSL---------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
           VVT+   ++         RDA  PAGL+SIAEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 136 VVTSGHQNVAAAAPQAQPRDAG-PAGLMSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 194

Query: 198 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTI 257
           S+GI AIS  C+GVAARACGLV +EP K+AE+LKDR  W RDCRS+EV  + PAGN GTI
Sbjct: 195 SIGIIAISHGCAGVAARACGLVGMEPAKVAEVLKDRLLWLRDCRSMEVVNVLPAGNNGTI 254

Query: 258 ELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEM 317
           ELLY Q YAPTTLAPARDFW LRYT+ LD+GSLVVCERSLS    GP+      F+R EM
Sbjct: 255 ELLYLQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERSLSTKQGGPSMPLVQPFIRGEM 314

Query: 318 LPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------- 368
           LPSG LIRP DGGGS+IHIVDH++LE WSVPEV+RPLYESS +VAQ+M++A         
Sbjct: 315 LPSGFLIRPSDGGGSVIHIVDHIDLEPWSVPEVVRPLYESSAMVAQKMSMAALRYLRQVA 374

Query: 369 -ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
            E +  V+ G GRQPA LR  SQ+L+RGFN+A+NG  DDGWS++  DG +DV I+VNS+ 
Sbjct: 375 HEDTHSVITGWGRQPAALRALSQKLTRGFNEALNGLADDGWSVVESDGVDDVCISVNSSP 434

Query: 428 SLSTASNPT--NSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAA 484
           S     N T  N L  +   +LCAKASMLLQ+V P  L+RF+RE RS+WAD N+DA+ A+
Sbjct: 435 SKVINCNATFNNGLPVVSSSVLCAKASMLLQDVSPPALLRFMREQRSQWADSNLDAFFAS 494

Query: 485 SLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLL 544
           ++K      P  R   F+G Q+I+PL HT + EE LEVI+L G++   +DA + RD+ LL
Sbjct: 495 AMKPNFCNLPMSRLGGFSG-QVILPLAHTFDPEEFLEVIKL-GNASNYQDALLHRDLFLL 552

Query: 545 QICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLD 604
           Q+ +GVDEN VG CSEL+FAPID  F DD PLLPSGFRIIP+D+      DT +   TLD
Sbjct: 553 QMYNGVDENMVGTCSELIFAPIDASFSDDSPLLPSGFRIIPIDAPL----DTSSPKCTLD 608

Query: 605 LTSSLEVGPA---TNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           L S+LEVG      N +   +++   +++V+TI FQF FES+LQD+VA MARQY+RS+I+
Sbjct: 609 LASTLEVGTPRSRINGSGPGNAASAGSKAVMTIVFQFAFESHLQDSVAAMARQYMRSIIA 668

Query: 662 SVQRVAMAICPSGLSPTLGPKLS--PGSPEALTLAHWICQSYSYHLGAELLRS-DSVGGD 718
           SVQR+A+A+  S L P  G  +S  P SPEA TLA WICQSY +H GAEL++S D  G +
Sbjct: 669 SVQRIALALSSSRLVPH-GSSISHTPASPEATTLARWICQSYRFHFGAELIKSGDGSGCE 727

Query: 719 SVLKNLWQHSDAILCCSLK 737
            VLK LW H+ AILCCSLK
Sbjct: 728 GVLKTLWHHASAILCCSLK 746


>gi|326517046|dbj|BAJ96515.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 845

 Score =  897 bits (2317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/737 (61%), Positives = 560/737 (75%), Gaps = 33/737 (4%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D  KYVRYT EQVEALER+Y ECPKPSSLRRQQL+REC +L++++PKQIKVWFQNRRCR
Sbjct: 15  MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLASVDPKQIKVWFQNRRCR 74

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATTDAS 143
           EKQRKE+ RLQ++NRKL AMNKLLMEENDRLQKQVS LV ENGY +QQ  +A  ATTD S
Sbjct: 75  EKQRKESGRLQSLNRKLAAMNKLLMEENDRLQKQVSHLVYENGYYRQQTHSAGLATTDTS 134

Query: 144 CDSVVTTPQHSL--------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPG 195
           C+SVVT+ Q ++        RDA+ PAGL+SIAEETL EFLSKATGTAV+WVQMPGMKPG
Sbjct: 135 CESVVTSGQQNVVAVPPPPPRDAS-PAGLMSIAEETLTEFLSKATGTAVEWVQMPGMKPG 193

Query: 196 PDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAG 255
           PDS+GI AIS  C+GVAARACGLV +EP K+A+ILKDRP W RDCRS+E+  + PAG+ G
Sbjct: 194 PDSIGIIAISHGCAGVAARACGLVGMEPAKVADILKDRPLWLRDCRSMEIVNVLPAGSNG 253

Query: 256 TIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRA 315
           TIELLY Q YAPTTLAPARDFW +RYT+ LD+GSLVVCERSLS    GP+      FVR 
Sbjct: 254 TIELLYMQLYAPTTLAPARDFWLMRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFVRG 313

Query: 316 EMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------- 368
           EMLPSG LIRP DGGGS+IHIVDHL+LE WSVPEV+RPLYESS +VAQ+M++A       
Sbjct: 314 EMLPSGFLIRPSDGGGSVIHIVDHLDLEPWSVPEVVRPLYESSAMVAQKMSMAALRYLRQ 373

Query: 369 ---ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
              E +  V+ G GRQPA LR  SQ+L+RGFN+ + G  DDGWS++  DG +DV I+VNS
Sbjct: 374 VAHEDTHSVITGWGRQPAALRALSQKLTRGFNETLGGLADDGWSVIESDGVDDVCISVNS 433

Query: 426 TKSLSTASNPT--NSLAFLG-GILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYS 482
           + S   + N T  + L  +  G+LCAKASMLLQ+V P  L+RFLREHRS+WAD ++DA+ 
Sbjct: 434 SPSKLMSCNATFSDGLPMVSTGVLCAKASMLLQDVSPPSLLRFLREHRSQWADSSLDAFF 493

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
           A++LK      P  R   F+G Q+I+PL HT + EE LEVI++ G++   +D  + RD+ 
Sbjct: 494 ASALKPNFCNLPVSRLGGFSG-QVILPLAHTFDPEEFLEVIKI-GNASNYQDTLMHRDLF 551

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRT 602
           LLQ+ +GVDEN +G CSEL+FAPID  F DD PLLPSGFRIIP++S      DT + + T
Sbjct: 552 LLQMYNGVDENTIGTCSELIFAPIDASFSDDSPLLPSGFRIIPIESPL----DTPSPNCT 607

Query: 603 LDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISS 662
           LDL S+LEVG   +   G S S   +++V+TIAFQF FES+LQD+VA MARQY+RS+ISS
Sbjct: 608 LDLASTLEVGTPGSRITGHSRS--GSKAVMTIAFQFAFESHLQDSVAVMARQYMRSIISS 665

Query: 663 VQRVAMAICPSGLSPTLGPKLSPG-SPEALTLAHWICQSYSYHLGAELLR-SDSVGGDSV 720
           VQR+A+A+  S L P    +L+P  +PEA TL+ WI QSY +H GAEL++ +D+  G+S 
Sbjct: 666 VQRIALALSSSHLVPHGSSRLAPPVTPEAATLSRWIVQSYRFHFGAELIKPADASSGESA 725

Query: 721 LKNLWQHSDAILCCSLK 737
           LK LW H+ AILCCSLK
Sbjct: 726 LKALWHHTSAILCCSLK 742


>gi|89514841|gb|ABD75295.1| class III homeodomain-leucine zipper protein C3HDZ1 [Marchantia
           polymorpha]
          Length = 860

 Score =  896 bits (2315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/758 (60%), Positives = 551/758 (72%), Gaps = 47/758 (6%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY+ECPKPSS+RRQQLI++CPIL+NIEPKQIKVWFQNRRCREK
Sbjct: 15  SGKYVRYTNEQVEALERVYNECPKPSSIRRQQLIKDCPILANIEPKQIKVWFQNRRCREK 74

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL------------- 133
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN Y++Q               
Sbjct: 75  QRKEATRLLSVNAKLTALNKLLMEENERLSKHTSQLAIENQYLRQHTSSDRNLKPNRRLH 134

Query: 134 -RTAPATTDASCDSVVT-------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVD 185
            +   AT D S +SVVT       TPQH  RDA+ PAGLL+IAEETL EFL+KATGTA+D
Sbjct: 135 EQAGMATPDTSSESVVTGGLQRHPTPQHPPRDAS-PAGLLAIAEETLTEFLAKATGTAID 193

Query: 186 WVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEV 245
           W+QMPGMKPGPDS+GI AIS  C+GVAARACGLV LEPTK+A++LKDRP+W RDCR L+V
Sbjct: 194 WIQMPGMKPGPDSIGIVAISHGCAGVAARACGLVGLEPTKVADVLKDRPAWLRDCRRLDV 253

Query: 246 FTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPN 305
              FP GN GT+EL+YTQ YAPTTLAPARDF TLRYT+ L++G+LV+CERSLSG+   P 
Sbjct: 254 LGAFPTGNGGTVELIYTQMYAPTTLAPARDFCTLRYTSFLEDGNLVICERSLSGAHGAPT 313

Query: 306 PASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM 365
                 FVRAEMLPSG LIRPC+GGG IIHIVDH++LE WSVPEVLRPLYESS V+AQ+M
Sbjct: 314 MPPVQFFVRAEMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVLRPLYESSAVLAQKM 373

Query: 366 TIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDG 415
           TI           E  GEVV G  +QPAVLR  SQRL+RGFN+AVNGF DDGW+ +  DG
Sbjct: 374 TIGALRHLRRLAQEIPGEVVLGSDQQPAVLRALSQRLARGFNEAVNGFADDGWTTLPSDG 433

Query: 416 AEDVIIAVN---STKSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRS 471
            +DV + VN   ++K      N T+ L  + GGILCAKASMLLQNVPPALL+RFLREHRS
Sbjct: 434 MDDVSVVVNPNPNSKQFGGGPNATDRLCSIGGGILCAKASMLLQNVPPALLIRFLREHRS 493

Query: 472 EWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLA 531
           EWAD  +DA +AA+L++ +Y     R +   G Q+ +PL H +E EE LEV++LEGHS  
Sbjct: 494 EWADCEIDADAAAALRSTNYVGSESRGS-LCGGQLPLPLAHAVEQEEFLEVVKLEGHSPT 552

Query: 532 QEDAFVSR-DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
           Q+   ++R D  LLQ+CSGVDENAVGAC++LVFAP+D    DD PLL SGFR+IPLDS  
Sbjct: 553 QDGGVLNRSDSFLLQLCSGVDENAVGACAQLVFAPVDVAVTDDVPLLASGFRVIPLDS-- 610

Query: 591 PDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
               D     RTLDLTS+LE G          +S  H RSVLTIAFQF FE + +D+VA 
Sbjct: 611 -GIVDGYGLSRTLDLTSTLEGGSEARLVGDSGASACHLRSVLTIAFQFAFEVHTRDSVAA 669

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLS--PGSPEALTLAHWICQSYSYHLGAE 708
           MARQYVR+V++SVQRVAMA+ PS L   LG      P +PEAL LA  + QSY  ++G E
Sbjct: 670 MARQYVRTVVASVQRVAMALAPSRLGSHLGGTRHPPPATPEALVLARRVLQSYRSYMGME 729

Query: 709 LL----RSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
           L     R+D    +++ K  W HSDAILCC+ K   +F
Sbjct: 730 LTRELERTDYSNSEALFKIFWNHSDAILCCACKSLPEF 767


>gi|89514843|gb|ABD75296.1| class III homeodomain-leucine zipper protein C3HDZ1 [Phaeoceros
           carolinianus]
          Length = 861

 Score =  895 bits (2312), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/767 (61%), Positives = 569/767 (74%), Gaps = 55/767 (7%)

Query: 19  SINKHQ------LDN-GKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEP 71
           ++N+H+      +DN GKYVRYT EQVEALERVY+ECPKPSS+RRQQLI++CPIL+NIE 
Sbjct: 2   ALNRHKDSRSSPMDNTGKYVRYTNEQVEALERVYNECPKPSSIRRQQLIKDCPILANIEA 61

Query: 72  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMK- 130
           KQIKVWFQNRRCREKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN Y++ 
Sbjct: 62  KQIKVWFQNRRCREKQRKEATRLLSVNAKLTALNKLLMEENERLSKHTSQLAIENQYLRQ 121

Query: 131 -----------------QQLRTAPATTDASCDSVVT-------TPQHSLRDANNPAGLLS 166
                             Q + A  TTD S +S VT       TPQH  RDA+ PAGLLS
Sbjct: 122 QQQQLVKSDCIGKPSRRSQEQLAMTTTDTSSESAVTGGLQQHPTPQHPPRDAS-PAGLLS 180

Query: 167 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKI 226
           IAEETL EFL+KATGTAVDW+QMPGMKPGP+S+GI AIS  C+G+AARACGLV LEPTK+
Sbjct: 181 IAEETLTEFLAKATGTAVDWIQMPGMKPGPESIGIVAISHGCAGIAARACGLVGLEPTKV 240

Query: 227 AEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLD 286
           AEILKDRPSW RDCR L++   FP GN GT+EL+YTQ YAPTTLAP RDF TLRYTT L+
Sbjct: 241 AEILKDRPSWLRDCRRLDILGAFPTGNGGTVELIYTQMYAPTTLAPPRDFCTLRYTTFLE 300

Query: 287 NGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWS 346
           +G+LV+CERSLSG+  GP       FVRAEMLPSG LIRPCDGGGSIIHIVDH++LE WS
Sbjct: 301 DGNLVICERSLSGAHGGPTMPPVQYFVRAEMLPSGYLIRPCDGGGSIIHIVDHVDLEPWS 360

Query: 347 VPEVLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGF 396
           VPEVLRPLYESS V+AQ+ TI           E++ E+  G G+QPAVLR  SQR++RGF
Sbjct: 361 VPEVLRPLYESSAVLAQKTTIGALRHLRQMAVESAIELPIGNGQQPAVLRALSQRIARGF 420

Query: 397 NDAVNGFNDDGWSLMTCDGAEDVIIAVNST---KSLSTASNPTNSLAFL-GGILCAKASM 452
           N+AVNGF+DDGW+ +  DG +DV +A NS+   K L   +  T+ L  L GGILCAKASM
Sbjct: 421 NEAVNGFSDDGWNTIVTDGMDDVSVAFNSSPHCKQLGAQATSTDRLCSLGGGILCAKASM 480

Query: 453 LLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGH 512
           LLQNVPPALL+RFLREHRSEWAD ++DA +AA+LK  +Y   G R +  +G Q+ MPL H
Sbjct: 481 LLQNVPPALLIRFLREHRSEWADCDIDADAAAALKTSTYGASG-RGSLCSG-QLPMPLAH 538

Query: 513 TIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPD 572
            +E EE LEV++LEGH  A +   + R+  LLQ+CSG+DENAVGAC++LVFAP+D    D
Sbjct: 539 AVEQEEFLEVVKLEGHG-AHDGTVLPRETFLLQLCSGIDENAVGACAQLVFAPVDAAVSD 597

Query: 573 DGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDS--SSCHHTRS 630
           D PLLPSGFR+IPLDS   D    L+  RTLDL S+LE G  ++   GDS  SSC H RS
Sbjct: 598 DVPLLPSGFRVIPLDSGLIDGYGGLS--RTLDLASTLEGGSESSRFVGDSGTSSC-HLRS 654

Query: 631 VLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEA 690
           VLTIAFQF +E + +D VA MARQYVR+V++SVQRVAMA+ P+ +   L  + SPG+PEA
Sbjct: 655 VLTIAFQFSYEIHTRDAVAAMARQYVRTVVASVQRVAMALAPARVGSQLALRQSPGTPEA 714

Query: 691 LTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           L LA  I QSY  +LG +L+R+++   D++ K  W H DAI+CCS K
Sbjct: 715 LLLARRILQSYRVNLGMDLVRTETGSTDALFKAFWLHGDAIVCCSWK 761


>gi|90110436|gb|ABD90520.1| class III homeodomain-leucine zipper [Marchantia polymorpha]
          Length = 860

 Score =  887 bits (2293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/758 (60%), Positives = 547/758 (72%), Gaps = 47/758 (6%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY+ECPKPSS+RRQQLI++CPIL+NIEPKQIKVWFQNRRCREK
Sbjct: 15  SGKYVRYTNEQVEALERVYNECPKPSSIRRQQLIKDCPILANIEPKQIKVWFQNRRCREK 74

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL------------- 133
           QRKEA+RL +VN K TA+NKLLMEEN+RL K  SQL  EN Y++Q               
Sbjct: 75  QRKEATRLLSVNAKPTALNKLLMEENERLSKHTSQLAIENQYLRQHTSSERNLKPSRRLH 134

Query: 134 -RTAPATTDASCDSVVT-------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVD 185
            +   AT D S +SVVT       TPQH  RDA+ PAGLL+IAEETL EFL+KATGTA+D
Sbjct: 135 EQAGMATPDTSSESVVTGGLQRHPTPQHPPRDAS-PAGLLAIAEETLTEFLAKATGTAID 193

Query: 186 WVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEV 245
           W+QMPGMKPGPDS+GI AIS  C+GVAARACGLV LEPTK+A++LKDRP+W RDCR L+V
Sbjct: 194 WIQMPGMKPGPDSIGIVAISHGCAGVAARACGLVGLEPTKVADVLKDRPAWLRDCRRLDV 253

Query: 246 FTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPN 305
              FP GN GT+EL+YTQ YAPTTLAPARDF  LRYT+ L++G+LV+CERSLSG+   P 
Sbjct: 254 LGAFPTGNGGTVELIYTQMYAPTTLAPARDFCALRYTSFLEDGNLVICERSLSGAHGAPT 313

Query: 306 PASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM 365
                 FVRAEMLPSG LIRPC+GGG IIHIVDH++LE WSVPEVLRPLYESS V+AQ+M
Sbjct: 314 MPPVQFFVRAEMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVLRPLYESSAVLAQKM 373

Query: 366 TIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDG 415
           T+           E  GEVV G  +QPAVLR  SQRL+RGFN+AVNGF DDGW+ +  DG
Sbjct: 374 TMGALRHLRRLAQEIPGEVVLGSDQQPAVLRALSQRLARGFNEAVNGFADDGWTTLPSDG 433

Query: 416 AEDVIIAVN---STKSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRS 471
            +DV + VN   ++K      N T+ L  + GGILCAKASMLLQNVPPALL+RFLREHRS
Sbjct: 434 MDDVSVVVNPNPNSKQFGGGPNATDRLCSIGGGILCAKASMLLQNVPPALLIRFLREHRS 493

Query: 472 EWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLA 531
           EWAD  +DA +AA+L++ +Y     R +   G Q+ +PL H +E EE LEV++LEGHS  
Sbjct: 494 EWADCEIDADAAAALRSTNYVGSESRGS-LCGGQLPLPLAHAVEQEEFLEVVKLEGHSPT 552

Query: 532 QEDAFVSR-DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
           Q+   ++R D  LLQ+CSGVDENAVGAC++LVFAP+D    DD PLL SGFR+IPLDS  
Sbjct: 553 QDGGVLNRSDSFLLQLCSGVDENAVGACAQLVFAPVDVAVTDDVPLLASGFRVIPLDS-- 610

Query: 591 PDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
               D     RTLDLTS+LE G          +S  H RSVLTIAFQF FE    D+VA 
Sbjct: 611 -GIVDGYGLSRTLDLTSTLEGGSEARLVGDSGASACHLRSVLTIAFQFAFEVYTGDSVAA 669

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLS--PGSPEALTLAHWICQSYSYHLGAE 708
           MARQYVR+V++SVQRVAMA+ PS L   LG      P +PEAL LA  + QSY  ++G E
Sbjct: 670 MARQYVRTVVASVQRVAMALAPSRLGSHLGGTRHPPPATPEALVLARRVLQSYRSYMGME 729

Query: 709 LL----RSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
           L     R+D    +++ K  W HSDAILCC+ K   +F
Sbjct: 730 LTRELERTDYSNSEALFKIFWNHSDAILCCACKSLPEF 767


>gi|147792360|emb|CAN65768.1| hypothetical protein VITISV_018803 [Vitis vinifera]
          Length = 868

 Score =  887 bits (2291), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/782 (61%), Positives = 554/782 (70%), Gaps = 86/782 (10%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K  +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 9   KGIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 68

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TAPATT 140
           RCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +Q  + T  AT 
Sbjct: 69  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLATK 128

Query: 141 DASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP 194
           D SC+SVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKP
Sbjct: 129 DTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKP 187

Query: 195 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNA 254
           GPDS+GI AIS  C+GVAARACGLV LEPT++AEILKDRPSWFRDCR+++V  + P  N 
Sbjct: 188 GPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANG 247

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           GTIELLY Q YAPTTLAPARDFW +  T     G    CE S   +      A+  +   
Sbjct: 248 GTIELLYMQLYAPTTLAPARDFWLV--TLYFCYGGWKSCEWSKHATS-----AAFCESRN 300

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ 368
           A   P+   IRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+ T+A      
Sbjct: 301 AAKWPT--CIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLR 358

Query: 369 ----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
               E S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GWS+M  DG +DV I VN
Sbjct: 359 QIAQEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGIDDVTILVN 418

Query: 425 STKSLSTASNPTNSLAFLGG-------ILCAKASMLL----------------------- 454
           S+    T  N    L+F  G       +LCAKASMLL                       
Sbjct: 419 SSPEKLTGLN----LSFANGFPAVSNAVLCAKASMLLQVKEEVHNLLTWGNQHLSLFHLL 474

Query: 455 ----------QNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGS 504
                     QNVPPA+L+RFLREHRSEWAD N+DAYSAA++K G  + PG R   F GS
Sbjct: 475 VEFTSLFLIQQNVPPAILLRFLREHRSEWADNNIDAYSAAAVKVGPCSLPGSRVGSF-GS 533

Query: 505 QIIMPLGHTIEHEE------LLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGAC 558
           Q+I+PL HTIEHEE       LEVI+LEG     EDA + RD+ LLQ+CSG+DENAVG C
Sbjct: 534 QVILPLAHTIEHEEASNLFIFLEVIKLEGVGHCPEDAMMPRDMFLLQLCSGMDENAVGTC 593

Query: 559 SELVFAPIDEMFPDDGPLLPSGFRIIPLDS-KTPDTPDTLTAHRTLDLTSSLEVGPATNP 617
           +EL+FAPID  F DD PLLPSGFRIIPLDS K   +P+     RTLDL S+LE+GPA N 
Sbjct: 594 AELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPN-----RTLDLASALEIGPAGNR 648

Query: 618 AAGDSS-SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLS 676
           ++ D S +  +TRSV+TIAF+F FES+LQ+NVA+MARQYVRS+ISSVQRVA+A+ PS LS
Sbjct: 649 SSNDYSVNGGNTRSVMTIAFEFAFESHLQENVASMARQYVRSIISSVQRVALALSPSHLS 708

Query: 677 PTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSV-GGDSVLKNLWQHSDAILCCS 735
              G +   G+PEA TLA WI  SY          +  V G +++LK LW  SDAI+CCS
Sbjct: 709 SHAGLRPPLGTPEAHTLARWISHSYRCATWVWSYSNPVVEGSETILKTLWHLSDAIMCCS 768

Query: 736 LK 737
           LK
Sbjct: 769 LK 770


>gi|357126818|ref|XP_003565084.1| PREDICTED: homeobox-leucine zipper protein HOX29-like isoform 1
           [Brachypodium distachyon]
          Length = 839

 Score =  882 bits (2280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/738 (61%), Positives = 554/738 (75%), Gaps = 32/738 (4%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D  KYVRYT EQVEALER+Y ECPKPSSLRRQQL+REC +L+ ++PKQIKVWFQNRRCR
Sbjct: 11  MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLAAVDPKQIKVWFQNRRCR 70

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--ATTDA 142
           EKQR+E+ RLQ++NRKLTAMNKLLMEENDRLQKQVS LV ENGY +QQ   +   ATTD 
Sbjct: 71  EKQRRESGRLQSLNRKLTAMNKLLMEENDRLQKQVSSLVYENGYYRQQHTHSAGLATTDT 130

Query: 143 SCDSVVTTPQHSL-------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPG 195
           SC+SVVT+ Q          RDA+ PAGL+SIAEETL EFLSKATGTAV+WVQMPGMKPG
Sbjct: 131 SCESVVTSGQQQNVVVPPPPRDAS-PAGLMSIAEETLTEFLSKATGTAVEWVQMPGMKPG 189

Query: 196 PDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAG 255
           PDS+GI AIS  C+GVAARACGLV +EP K+AEILKDRP W RDCRS+EV  + PAG+ G
Sbjct: 190 PDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPLWLRDCRSMEVVNVLPAGSNG 249

Query: 256 TIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRA 315
           TIELLY Q YA TTLAPARDFW LRYT+ LD+GSLVVCERSLS    GP+      F+R 
Sbjct: 250 TIELLYMQLYAQTTLAPARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRG 309

Query: 316 EMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------- 368
           EMLPSG LIRP DGGGS+IHIVDHL+LE  SVPEV+RPLYESS +VAQ+M++A       
Sbjct: 310 EMLPSGFLIRPSDGGGSVIHIVDHLDLEPRSVPEVVRPLYESSAIVAQKMSMAALRYLRQ 369

Query: 369 ---ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
              E +  ++ G GRQPA LR  SQ+L+RGFN+A+ G  DDGWS +  DG +DV I+VNS
Sbjct: 370 LAHEDTHSIITGWGRQPAALRALSQKLTRGFNEALCGLTDDGWSAIESDGVDDVCISVNS 429

Query: 426 TKSLSTASNPT--NSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYS 482
           + +   + N T  + L  +  G+LCAKASMLLQ+V P  L++FL EHRS+WAD  +DA+ 
Sbjct: 430 SLNKVISCNATFGDGLPIVSAGVLCAKASMLLQDVSPPSLLQFLHEHRSQWADSTLDAFF 489

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
           A++LK      P  R   F+G Q+I+PL HT + EE LEVI++ G++   +D  + RD+ 
Sbjct: 490 ASALKPNFCNLPMSRLGGFSG-QVILPLAHTFDPEEFLEVIKI-GNASNYQDTLMHRDLF 547

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRT 602
           LLQ+ +GVDEN VG+CSEL+FAPID  F DD PLLPSGFRIIP+DS      DT + + T
Sbjct: 548 LLQMYNGVDENTVGSCSELIFAPIDASFSDDSPLLPSGFRIIPIDSPL----DTSSPNCT 603

Query: 603 LDLTSSLEVG-PATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           LDL S+LEVG P        S +    ++V+TIAFQF FES+LQD+VA MA+QY+RS+IS
Sbjct: 604 LDLASTLEVGTPRGRMTGSGSVNGAGMKAVMTIAFQFAFESHLQDSVAAMAQQYMRSIIS 663

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPG-SPEALTLAHWICQSYSYHLGAELLRS-DSVGGDS 719
           SVQR+A+A+  S L     P+L P  +PEA TL+ WI QSY +H GAEL++S D+ GG+S
Sbjct: 664 SVQRIALALSSSRLVSHGSPRLLPHVTPEAATLSRWIVQSYRFHFGAELIKSGDADGGES 723

Query: 720 VLKNLWQHSDAILCCSLK 737
           VLK+LW H+ AILCCSLK
Sbjct: 724 VLKSLWHHTSAILCCSLK 741


>gi|357126820|ref|XP_003565085.1| PREDICTED: homeobox-leucine zipper protein HOX29-like isoform 2
           [Brachypodium distachyon]
          Length = 872

 Score =  872 bits (2253), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/771 (59%), Positives = 556/771 (72%), Gaps = 65/771 (8%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D  KYVRYT EQVEALER+Y ECPKPSSLRRQQL+REC +L+ ++PKQIKVWFQNRRCR
Sbjct: 11  MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLAAVDPKQIKVWFQNRRCR 70

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ------------ 132
           EKQR+E+ RLQ++NRKLTAMNKLLMEENDRLQKQVS LV ENGY +QQ            
Sbjct: 71  EKQRRESGRLQSLNRKLTAMNKLLMEENDRLQKQVSSLVYENGYYRQQHTHSVRPSSPPP 130

Query: 133 -----LRTAPA------------------TTDASCDSVVTTPQHSL-------RDANNPA 162
                +R A A                  TTD SC+SVVT+ Q          RDA+ PA
Sbjct: 131 APAAMMREAHAFVAPPPPPLLLPLQAGLATTDTSCESVVTSGQQQNVVVPPPPRDAS-PA 189

Query: 163 GLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLE 222
           GL+SIAEETL EFLSKATGTAV+WVQMPGMKPGPDS+GI AIS  C+GVAARACGLV +E
Sbjct: 190 GLMSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGME 249

Query: 223 PTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYT 282
           P K+AEILKDRP W RDCRS+EV  + PAG+ GTIELLY Q YA TTLAPARDFW LRYT
Sbjct: 250 PAKVAEILKDRPLWLRDCRSMEVVNVLPAGSNGTIELLYMQLYAQTTLAPARDFWLLRYT 309

Query: 283 TTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNL 342
           + LD+GSLVVCERSLS    GP+      F+R EMLPSG LIRP DGGGS+IHIVDHL+L
Sbjct: 310 SILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGGGSVIHIVDHLDL 369

Query: 343 EAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRL 392
           E  SVPEV+RPLYESS +VAQ+M++A          E +  ++ G GRQPA LR  SQ+L
Sbjct: 370 EPRSVPEVVRPLYESSAIVAQKMSMAALRYLRQLAHEDTHSIITGWGRQPAALRALSQKL 429

Query: 393 SRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPT--NSLAFL-GGILCAK 449
           +RGFN+A+ G  DDGWS +  DG +DV I+VNS+ +   + N T  + L  +  G+LCAK
Sbjct: 430 TRGFNEALCGLTDDGWSAIESDGVDDVCISVNSSLNKVISCNATFGDGLPIVSAGVLCAK 489

Query: 450 ASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMP 509
           ASMLLQ+V P  L++FL EHRS+WAD  +DA+ A++LK      P  R   F+G Q+I+P
Sbjct: 490 ASMLLQDVSPPSLLQFLHEHRSQWADSTLDAFFASALKPNFCNLPMSRLGGFSG-QVILP 548

Query: 510 LGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEM 569
           L HT + EE LEVI++ G++   +D  + RD+ LLQ+ +GVDEN VG+CSEL+FAPID  
Sbjct: 549 LAHTFDPEEFLEVIKI-GNASNYQDTLMHRDLFLLQMYNGVDENTVGSCSELIFAPIDAS 607

Query: 570 FPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVG-PATNPAAGDSSSCHHT 628
           F DD PLLPSGFRIIP+DS      DT + + TLDL S+LEVG P        S +    
Sbjct: 608 FSDDSPLLPSGFRIIPIDSPL----DTSSPNCTLDLASTLEVGTPRGRMTGSGSVNGAGM 663

Query: 629 RSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPG-S 687
           ++V+TIAFQF FES+LQD+VA MA+QY+RS+ISSVQR+A+A+  S L     P+L P  +
Sbjct: 664 KAVMTIAFQFAFESHLQDSVAAMAQQYMRSIISSVQRIALALSSSRLVSHGSPRLLPHVT 723

Query: 688 PEALTLAHWICQSYSYHLGAELLRS-DSVGGDSVLKNLWQHSDAILCCSLK 737
           PEA TL+ WI QSY +H GAEL++S D+ GG+SVLK+LW H+ AILCCSLK
Sbjct: 724 PEAATLSRWIVQSYRFHFGAELIKSGDADGGESVLKSLWHHTSAILCCSLK 774


>gi|325651485|dbj|BAJ83628.1| class III HD-Zip protein [Cabomba caroliniana]
          Length = 703

 Score =  865 bits (2235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/692 (66%), Positives = 535/692 (77%), Gaps = 32/692 (4%)

Query: 72  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ 131
           KQIKVWFQNRR REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENG MK 
Sbjct: 1   KQIKVWFQNRRRREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGNMKH 60

Query: 132 QLRTAPATTDASCDSVVTTPQHSL--------RDANNPAGLLSIAEETLAEFLSKATGTA 183
           QL T   TTD SC+SVVT+ QH          R  +NPAGLLSIAE TLAEFLSKATGT+
Sbjct: 61  QLHTPLMTTDTSCESVVTSGQHQPNTSTQHPPRGTSNPAGLLSIAEVTLAEFLSKATGTS 120

Query: 184 VDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSL 243
           VDWVQM GMKPGPDSVGI A+S++ +GVAARACGLVSLEP+K+AEILKDR SW+RDCRSL
Sbjct: 121 VDWVQMLGMKPGPDSVGIVAVSRNSNGVAARACGLVSLEPSKVAEILKDRMSWYRDCRSL 180

Query: 244 EVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAG 303
           +V T+ P+GN GTIEL+Y Q YAPTTLA ARDFWTLRYT  +++GSLVVC+RSL+ S  G
Sbjct: 181 DVLTVLPSGNGGTIELIYMQTYAPTTLASARDFWTLRYTIGMEDGSLVVCQRSLTASTGG 240

Query: 304 PNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQ 363
           P+ ++   FVRAEMLPSGCLIRPC+ GGS +HIVDH++L+AWSVPEVLRPLYESSK++AQ
Sbjct: 241 PSGSTTPNFVRAEMLPSGCLIRPCEVGGSTVHIVDHIDLDAWSVPEVLRPLYESSKILAQ 300

Query: 364 RMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTC 413
           +MT+           ETS E  Y  GRQPAVLRTFSQRLSRGFNDAVN F++DGWSLM  
Sbjct: 301 KMTLVALRHIRQVAHETSDEAGYSTGRQPAVLRTFSQRLSRGFNDAVNCFSEDGWSLMNS 360

Query: 414 DGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHR 470
           DG EDV IAVN++ S +   + ++++  L   GG+LCAKASMLLQNVPPA+LVRFLREHR
Sbjct: 361 DGVEDVTIAVNASPSKNLVGHFSSTMPLLVSGGGVLCAKASMLLQNVPPAILVRFLREHR 420

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRF---TGSQIIMPLGHTIEHEELLEVIRLEG 527
           SEWAD  +DA+SAAS K     + G  PT F   +G Q  +PLGH ++ EELLEVIRLEG
Sbjct: 421 SEWADCGIDAFSAASFKGNPCDFGG--PTNFSGLSGGQTALPLGHMLDKEELLEVIRLEG 478

Query: 528 HSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLD 587
           H  +     +  D++LLQ+CSG+DENA GAC++LVFAPIDE F DD PLLPSGFR+I L+
Sbjct: 479 HGFSPVAGVLPSDMYLLQLCSGIDENAAGACAQLVFAPIDETFADDAPLLPSGFRVISLE 538

Query: 588 SKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHT-RSVLTIAFQFPFESNLQD 646
            KT    D  + +RTLDL S+LE+G   N A  D+++  ++ RSVLTIAFQF +E++L+D
Sbjct: 539 PKT----DIPSLNRTLDLASTLELGSGANRAHSDNAANSYSFRSVLTIAFQFTYENHLRD 594

Query: 647 NVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLG 706
            VA MARQYVRSV+SSVQRVAMAI PS LS     K    SPEALTLA W  +SY  H G
Sbjct: 595 TVAAMARQYVRSVVSSVQRVAMAIVPSRLSSLDSSKSFSRSPEALTLARWTSRSYRLHSG 654

Query: 707 AELLR-SDSVGGDSVLKNLWQHSDAILCCSLK 737
            EL R +D   G+SVLK LW H DAILCCSLK
Sbjct: 655 MELFRAADGQDGESVLKLLWHHGDAILCCSLK 686


>gi|109729912|tpg|DAA05770.1| TPA_inf: class III HD-Zip III protein HB8 [Zea mays]
 gi|413947684|gb|AFW80333.1| putative homeobox/bZIP/lipid-binding protein family [Zea mays]
          Length = 858

 Score =  859 bits (2219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/754 (60%), Positives = 559/754 (74%), Gaps = 49/754 (6%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D  KYVRYT EQVEALER+Y ECPKPSSLRRQQL+R+CP+L++++PKQIKVWFQNRRCR
Sbjct: 14  MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRDCPVLASVDPKQIKVWFQNRRCR 73

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATTDAS 143
           EKQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +QQ ++A  ATTD S
Sbjct: 74  EKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYYRQQTQSAGLATTDTS 133

Query: 144 CDSVVTT---------PQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP 194
           C+SVVT+         PQ   RDA  PAGL+SIAEETL EFLSKATGTAV+WVQMPGMKP
Sbjct: 134 CESVVTSGPQNVAAVLPQAQPRDAG-PAGLMSIAEETLTEFLSKATGTAVEWVQMPGMKP 192

Query: 195 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNA 254
           GPDS+GI AIS  C GVAARACGLV +EP K+AE+LKDRP W RDCRS+EV  + PAG +
Sbjct: 193 GPDSIGIIAISHGCPGVAARACGLVGMEPAKVAEVLKDRPLWLRDCRSMEVVNVLPAGTS 252

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           GT+ELLY Q YAPTTLAPARDFW LRYT+ LD+GSLVVCERSL  +  GP+      FVR
Sbjct: 253 GTVELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERSLGANQGGPSMPLVQPFVR 312

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ 368
            EMLPSG L+RP DGGGS+IHIVDH++LE WSVPEV+RPLYESS +VAQ+M++A      
Sbjct: 313 GEMLPSGFLVRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKMSMAALRYLR 372

Query: 369 -----ETSGEVVY-GLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
                +T+  VV  G GRQPA LR  SQ+L+RGFN+A+NG  DDGWS++  DG +DV ++
Sbjct: 373 QVAHEDTAHSVVTGGWGRQPASLRALSQKLTRGFNEALNGLADDGWSVVGSDGVDDVCVS 432

Query: 423 VNSTKSLSTASNPTNSLAFLGG-----ILCAKASMLLQNVPPALLVRFLREHRSEWADFN 477
           V+S+ S   + N T S   + G     +LCAKASMLLQ+V P  L+RF+RE RS+WAD N
Sbjct: 433 VSSSPSRVVSCNATFSNGPVVGTGSSSVLCAKASMLLQDVSPPELLRFMREQRSQWADSN 492

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFT--GSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDA 535
           +DA+ A+++K    + P   P R    G Q+I+PL HT + EE LEVI++ G++   +DA
Sbjct: 493 LDAFFASAMKPDFCSLP--IPPRLGGFGGQVILPLAHTFDPEEFLEVIKV-GNAGNYQDA 549

Query: 536 FVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPD 595
            + RD+ LLQ+ +GVDEN  G CSEL+FAPID  F DD PLLPSGFRIIP+D+      D
Sbjct: 550 LLHRDLFLLQMYNGVDENMAGTCSELIFAPIDASFSDDSPLLPSGFRIIPIDAPL----D 605

Query: 596 TLTAHRTLDLTSSLEVGPATNPAAGDSS------SCHHTRSVLTIAFQFPFESNLQDNVA 649
           T +   TLDL S+LE G   +  +G         +C  +++V+TI FQF FES+LQD+VA
Sbjct: 606 TSSPKCTLDLASTLEAGTPRSRTSGSGGPGTAAAACAGSKAVMTIVFQFAFESHLQDSVA 665

Query: 650 TMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLS----PGSPEALTLAHWICQSYSYHL 705
            MARQYVRS+++SVQR+A+A+  + L    G  +S       PEA TLA WICQSY +H 
Sbjct: 666 AMARQYVRSIVASVQRIALALSSARLVVPHGSGVSHGAPAAGPEAATLARWICQSYRFHF 725

Query: 706 GAELLRS-DSVG-GDSVLKNLWQHSDAILCCSLK 737
           GAEL++S D  G G++VLK LW H+ AILCCSLK
Sbjct: 726 GAELIKSADGSGCGEAVLKTLWHHAGAILCCSLK 759


>gi|187609452|sp|A2WLR5.2|HOX29_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX29; AltName:
           Full=HD-ZIP protein HOX29; AltName: Full=Homeodomain
           transcription factor HOX29; AltName: Full=OsHox29
          Length = 861

 Score =  858 bits (2218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/772 (58%), Positives = 554/772 (71%), Gaps = 69/772 (8%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D  KYVRYT EQVEALER+Y ECPKPSSLRRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 1   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 60

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENG----------------- 127
           EKQRKE+SRLQ +NRKLTAMNKLLMEENDRLQKQVSQLV ++G                 
Sbjct: 61  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 120

Query: 128 -----YMKQQLRTAPATTDASCDSVVTTP-----------QHSLRDANNPAGLLSIAEET 171
                    QL TA   TD SC+SVVT+            Q   RDA+ PAGL+SIAEET
Sbjct: 121 PQAAAAAGHQLATA---TDTSCESVVTSGHHHQQQQHNVVQPPPRDAS-PAGLMSIAEET 176

Query: 172 LAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILK 231
           L EFLSKATGTAV+W+QMPGMKPGPDS+GI AIS  C+GVAARACGLV +EP K+AEILK
Sbjct: 177 LTEFLSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILK 236

Query: 232 DRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLV 291
           DRP W RDCRS++V  + PAG  GTIELLY Q YAPTTLAPARDFW LRYT+ LD+GSLV
Sbjct: 237 DRPLWLRDCRSMDVVNVLPAGANGTIELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLV 296

Query: 292 VCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL 351
           VCERSLS    GP+      F+R EMLPSG LIRP DGGGS+IHIVDH++LE WSVPEV+
Sbjct: 297 VCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGGGSVIHIVDHMDLEPWSVPEVV 356

Query: 352 RPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVN 401
           RPLYESS +VAQ++++A          E +  V+ G GRQPA LR  SQ+L+RGFN+A+N
Sbjct: 357 RPLYESSAMVAQKISMAALRYLRQVAHEDTRSVITGWGRQPAALRALSQKLTRGFNEALN 416

Query: 402 GFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLG-GILCAKASMLLQNVPPA 460
           G  DDGWS++  DG +DV I+VNS+K +   +  ++ L  +  G+LCAKASMLLQ+V P 
Sbjct: 417 GLADDGWSVIESDGVDDVCISVNSSKVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPP 476

Query: 461 LLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELL 520
            L++FLREHRS+WAD N+DA+ A+++K      P  R   F+G Q+I+PL HT E EE L
Sbjct: 477 SLLQFLREHRSQWADSNLDAFFASAMKPNFCNLPMSRLGGFSG-QVILPLAHTFEPEEFL 535

Query: 521 EVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSG 580
           EVI+L G++   +D  V RD+ LLQ+ +GV+E++ G CSEL+FAPID  F DD PLLPSG
Sbjct: 536 EVIKL-GNASNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSPLLPSG 594

Query: 581 FRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVG-PATNPAA--GDSSSC------HHTRSV 631
           FRIIP+DS      DT + + TLDL S+LE   P +  +   G   +C        +++V
Sbjct: 595 FRIIPIDSPL----DTSSPNCTLDLASTLEAATPRSRISGVNGGGGTCAAAAASSSSKAV 650

Query: 632 LTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSP----TLGPKLSPGS 687
           +TIAFQF F+ +LQD+VA MARQY+R++ISSVQR+A+A+  S L P        +LSP +
Sbjct: 651 MTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAAAAAAQLSPVT 710

Query: 688 PEALTLAHWICQSYSYHLGAELLRS--DSVGGDSVLKNLWQHSDAILCCSLK 737
           PEA TL  WICQSY +H GAEL++S   +   +S+LK +W H  AILCCSLK
Sbjct: 711 PEAATLPRWICQSYRFHFGAELIKSVDANSSNESILKAVWHHPSAILCCSLK 762


>gi|89514855|gb|ABD75302.1| class III homeodomain-leucine zipper protein C3HDZ1 [Psilotum
           nudum]
          Length = 827

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/736 (58%), Positives = 534/736 (72%), Gaps = 34/736 (4%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K  +D+GKYVRY+ EQVEALER+Y+ECPKPS+LRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 10  KGVMDSGKYVRYSNEQVEALERLYNECPKPSALRRQQLIRECPILSNIEPKQIKVWFQNR 69

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL-RTAPATT 140
           RCREKQRKEA+RLQTVN KLTAMNKLLMEENDRLQKQV+QL+CENGY++QQL +    TT
Sbjct: 70  RCREKQRKEAARLQTVNGKLTAMNKLLMEENDRLQKQVAQLLCENGYLRQQLPQGGLTTT 129

Query: 141 DASCDSVVT-------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           D SCDSVVT       TPQH   DA   +G+LS+AEE LAEFL KATGTA+DW+QMPGMK
Sbjct: 130 DTSCDSVVTSGLQHLPTPQHPPHDAATHSGILSLAEEALAEFLQKATGTAIDWIQMPGMK 189

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDS G+  IS  C+GVAARAC LV LEP K+ EILKDRPSW  DCR L        GN
Sbjct: 190 PGPDSTGMINISHGCTGVAARACSLVGLEPAKVVEILKDRPSWHWDCRQLTKLYSSNVGN 249

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIE+LY Q YAPTTLAPARDF TLRYT+ L++GS V+CERSL+ +   P       FV
Sbjct: 250 NGTIEVLYMQMYAPTTLAPARDFCTLRYTSPLEDGSYVICERSLNNTHGPPTAPHMQSFV 309

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI------ 367
           RAEMLP G LIRPC+G GSI+ IVDH++LE+W+VPEVLRPLYESS  +A ++TI      
Sbjct: 310 RAEMLPCGYLIRPCEGSGSILIIVDHMDLESWTVPEVLRPLYESSAALAHKITIPALRYL 369

Query: 368 ---AETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
              A+ +G  + G+ R+PA +R+ SQRL+RGFNDAVNGF DDGW+ +  DG +DV +A+ 
Sbjct: 370 RHLAQAAGVEIPGV-RRPAAVRSLSQRLARGFNDAVNGFGDDGWTTVPSDGTDDVTVAIK 428

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAA 484
           S  +     +   S     G+LCAKASMLLQNVPPALLVRFLREHRSEWAD+   A S +
Sbjct: 429 SNYNARELGDQFTSGT--AGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGAAANSTS 486

Query: 485 SLKAGSYAYPGMRPTR--FTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
           +L+  ++   G+  T      SQ++    H +E +E LE+I+LEG    +E + + RDI 
Sbjct: 487 ALQINNF---GILDTHGDVCISQVLQQPIHAVEDDEFLELIKLEGR---EEGSTLPRDIF 540

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRT 602
           LLQ+CSG++EN  GA +++VFAPID   PDD PLLPSGFR IPLD+   D     +  RT
Sbjct: 541 LLQLCSGLEENTAGASAQMVFAPIDISIPDDVPLLPSGFRAIPLDNCLLDAG---SPSRT 597

Query: 603 LDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISS 662
           LDL S+L+VG      A +  +  H RSVLT+AFQF F S++Q++  TM+RQYVR+V+S+
Sbjct: 598 LDLASTLDVGSTNGKYANN--AVFHLRSVLTLAFQFSFHSHMQESATTMSRQYVRNVVST 655

Query: 663 VQRVAMAICPSGLSPTLG-PKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVL 721
           VQR+AMA+ PS LSP +G  +  PG+PE +  A WIC+SY   LG +L+  D    D  L
Sbjct: 656 VQRLAMALAPSRLSPHMGSSRQMPGTPEGVNYARWICRSYKCKLGIDLVSVDGERSDEYL 715

Query: 722 KNLWQHSDAILCCSLK 737
           K +WQ  DAI+CCS K
Sbjct: 716 KAVWQCYDAIMCCSCK 731


>gi|187609456|sp|Q5QMZ9.2|HOX29_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX29; AltName:
           Full=HD-ZIP protein HOX29; AltName: Full=Homeodomain
           transcription factor HOX29; AltName: Full=OSHB5;
           AltName: Full=OsHox29
 gi|187369569|dbj|BAG31403.1| class III homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
          Length = 868

 Score =  848 bits (2190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/772 (57%), Positives = 551/772 (71%), Gaps = 69/772 (8%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D  KYVRYT EQVEALER+Y ECPKPSSLRRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 8   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 67

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENG--------YMKQ----- 131
           EKQRKE+SRLQ +NRKLTAMNKLLMEENDRLQKQVSQLV ++G         M++     
Sbjct: 68  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 127

Query: 132 ---------QLRTAPATTDASCDSVVTTP-----------QHSLRDANNPAGLLSIAEET 171
                    QL TA   TD SC+SVVT+            Q   RDA+ PAGL+SIAEET
Sbjct: 128 PQAAAAAGHQLATA---TDTSCESVVTSGHHHQQQQHNVVQPPPRDAS-PAGLMSIAEET 183

Query: 172 LAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILK 231
           L EFLSKATGTAV+W+QMPGMKPGPDS+GI AIS  C+GVAARACGLV +EP K+AEILK
Sbjct: 184 LTEFLSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILK 243

Query: 232 DRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLV 291
           DRP W RDCRS++V  + PAG  GTIELLY Q YAPTTLAPARDFW LRYT+ LD+GSLV
Sbjct: 244 DRPLWLRDCRSMDVVNVLPAGANGTIELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLV 303

Query: 292 VCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL 351
           VCERSLS    GP+      F+R EMLPSG LIRP D GGS+IHIVDH++LE WSVPEV+
Sbjct: 304 VCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDVGGSVIHIVDHMDLEPWSVPEVV 363

Query: 352 RPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVN 401
           RPLYESS +VAQ++++A          E +  V+ G GRQPA LR  SQ+L+RGFN+A+N
Sbjct: 364 RPLYESSAMVAQKISMAALRYLRQVAHEDTRSVITGWGRQPAALRALSQKLTRGFNEALN 423

Query: 402 GFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLG-GILCAKASMLLQNVPPA 460
           G  DDGWS++  DG +DV I+VNS+K +   +  ++ L  +  G+LCAKASMLLQ+V P 
Sbjct: 424 GLADDGWSVIESDGVDDVCISVNSSKVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPP 483

Query: 461 LLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELL 520
            L++FLREHRS+WAD N+DA+ A+++K      P  R   F+G Q+I+PL HT E EE L
Sbjct: 484 SLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSRLGGFSG-QVILPLAHTFEPEEFL 542

Query: 521 EVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSG 580
           EVI+L G++   +D  V RD+ LLQ+ +GV+E++ G CSEL+FAPID  F DD PLLPSG
Sbjct: 543 EVIKL-GNASNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSPLLPSG 601

Query: 581 FRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP---------ATNPAAGDSSSCHHTRSV 631
           FRIIP+DS      DT + + TLDL S+LE                    +++   +++V
Sbjct: 602 FRIIPIDSPL----DTSSPNCTLDLASTLEAATPRSRISGVNGGGGGCAAAAASSSSKAV 657

Query: 632 LTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGL----SPTLGPKLSPGS 687
           +TIAFQF F+ +LQD+VA MARQY+R++ISSVQR+A+A+  S L    +     +LSP +
Sbjct: 658 MTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAGAAAAQLSPVT 717

Query: 688 PEALTLAHWICQSYSYHLGAELLRSDSVG--GDSVLKNLWQHSDAILCCSLK 737
           PEA TL  WICQSY +H G EL++S       +S+LK +W H  AILCCSLK
Sbjct: 718 PEAATLPRWICQSYRFHFGDELIKSVDANSSNESILKAVWHHPSAILCCSLK 769


>gi|125524797|gb|EAY72911.1| hypothetical protein OsI_00785 [Oryza sativa Indica Group]
          Length = 886

 Score =  847 bits (2188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/800 (56%), Positives = 555/800 (69%), Gaps = 100/800 (12%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D  KYVRYT EQVEALER+Y ECPKPSSLRRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 1   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 60

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENG----------------- 127
           EKQRKE+SRLQ +NRKLTAMNKLLMEENDRLQKQVSQLV ++G                 
Sbjct: 61  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 120

Query: 128 -----YMKQQLRTAPATTDASCDSVVTTP-----------QHSLRDANNPAGLLSIAEET 171
                    QL TA   TD SC+SVVT+            Q   RDA +PAGL+SIAEET
Sbjct: 121 PQAAAAAGHQLATA---TDTSCESVVTSGHHHQQQQHNVVQPPPRDA-SPAGLMSIAEET 176

Query: 172 LAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILK 231
           L EFLSKATGTAV+W+QMPGMKPGPDS+GI AIS  C+GVAARACGLV +EP K+AEILK
Sbjct: 177 LTEFLSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILK 236

Query: 232 DRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQA-------------------------YA 266
           DRP W RDCRS++V  + PAG  GTIELLY QA                         YA
Sbjct: 237 DRPLWLRDCRSMDVVNVLPAGANGTIELLYMQARTHKPENSEPEPEILKLKFVFDLQLYA 296

Query: 267 PTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRP 326
           PTTLAPARDFW LRYT+ LD+GSLVVCERSLS    GP+      F+R EMLPSG LIRP
Sbjct: 297 PTTLAPARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRP 356

Query: 327 CDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEVVY 376
            DGGGS+IHIVDH++LE WSVPEV+RPLYESS +VAQ++++A          E +  V+ 
Sbjct: 357 SDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKISMAALRYLRQVAHEDTRSVIT 416

Query: 377 GLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPT 436
           G GRQPA LR  SQ+L+RGFN+A+NG  DDGWS++  DG +DV I+VNS+K +   +  +
Sbjct: 417 GWGRQPAALRALSQKLTRGFNEALNGLADDGWSVIESDGVDDVCISVNSSKVIGCNATFS 476

Query: 437 NSLAFLG-GILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPG 495
           + L  +  G+LCAKASMLLQ+V P  L++FLREHRS+WAD N+DA+ A+++K      P 
Sbjct: 477 SGLPIVSTGVLCAKASMLLQDVSPPSLLQFLREHRSQWADSNLDAFFASAMKPNFCNLPM 536

Query: 496 MRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAV 555
            R   F+G Q+I+PL HT E EE LEVI+L G++   +D  V RD+ LLQ+ +GV+E++ 
Sbjct: 537 SRLGGFSG-QVILPLAHTFEPEEFLEVIKL-GNASNYQDTLVHRDLFLLQMYNGVEESSA 594

Query: 556 GACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPAT 615
           G CSEL+FAPID  F DD PLLPSGFRIIP+DS      DT + + TLDL S+LE   A 
Sbjct: 595 GTCSELIFAPIDASFSDDSPLLPSGFRIIPIDSPL----DTSSPNCTLDLASTLE---AA 647

Query: 616 NPAA------GDSSSC------HHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSV 663
            P +      G   +C        +++V+TIAFQF F+ +LQD+VA MARQY+R++ISSV
Sbjct: 648 TPRSRISGVNGGGGTCAAAAASSSSKAVMTIAFQFAFDGHLQDSVAAMARQYMRNIISSV 707

Query: 664 QRVAMAICPSGLSP----TLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRS--DSVGG 717
           QR+A+A+  S L P        +LSP +PEA TL  WICQSY +H GAEL++S   +   
Sbjct: 708 QRIAVALSSSRLVPPGAAAAAAQLSPVTPEAATLPRWICQSYRFHFGAELIKSVDANSSN 767

Query: 718 DSVLKNLWQHSDAILCCSLK 737
           +S+LK +W H  AILCCSLK
Sbjct: 768 ESILKAVWHHPSAILCCSLK 787


>gi|168004063|ref|XP_001754731.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693835|gb|EDQ80185.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 821

 Score =  845 bits (2182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/739 (58%), Positives = 531/739 (71%), Gaps = 35/739 (4%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY ECPKPSS+RR QLI+ECPIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWFQNRRCREK 63

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPA---TTDAS 143
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  +N  ++QQL   PA   +TD S
Sbjct: 64  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLDNHALRQQLPNLPAGVASTDTS 123

Query: 144 CDSVVT-------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGP 196
           CDS VT       T QHS  DA+ PAGLLS+AEETL +FL+KATGTAVDW+Q+PGMKPGP
Sbjct: 124 CDSAVTGGLPQHLTSQHSSPDAS-PAGLLSMAEETLTDFLAKATGTAVDWIQLPGMKPGP 182

Query: 197 DSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGT 256
           D++GI AIS  C G+AARACGL +L+ +K+AEILKDRP W +DCR +EV    P GN GT
Sbjct: 183 DAIGIIAISHGCVGIAARACGLAALDFSKVAEILKDRPGWSQDCRRMEVLGTLPTGNGGT 242

Query: 257 IELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAE 316
           IELLYTQ YAPTTLAPARDF TLRYTT L++G+LV+CERSL+G   GP       F+RAE
Sbjct: 243 IELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLTGKHNGPTMPPVQSFIRAE 302

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI--------- 367
           M PSG LIRPC+GGG IIHIVDH+  E WSVPEVLRPLYES  V+A + TI         
Sbjct: 303 MFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESPAVLAHKSTIAALRYLRRI 362

Query: 368 -AETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNST 426
            AE SGE++   G+ PAV+RT SQRL++GFNDAVNGF DDGW  M  DG +DV + +N+T
Sbjct: 363 AAEESGEIIIRNGQHPAVIRTLSQRLTKGFNDAVNGFGDDGWVPMESDGMDDVSVMLNAT 422

Query: 427 KSLSTASNPTNSLAFL--GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAA 484
                    T+ L F   GGILCAKASMLLQNVPPALL+RFLREHRSEWAD  +DA +A 
Sbjct: 423 PKSMEGQIATDKLLFSLGGGILCAKASMLLQNVPPALLIRFLREHRSEWADHEIDANAAT 482

Query: 485 SLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLL 544
           + +  S  +  +   R +  Q+ +PL    E  E LEV++LEGHS  Q  + +SRD  LL
Sbjct: 483 AFRGASNGH--VSRGRMSHVQLPLPLAQFGEQGEFLEVVKLEGHSAVQH-SVLSRDSFLL 539

Query: 545 QICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLD 604
           Q+CSG++E AVGA ++LVFAPID    +D PLLPSGFR+IP+DS      D +  +RTLD
Sbjct: 540 QLCSGIEEGAVGAGAQLVFAPIDAAVSEDIPLLPSGFRVIPVDSSV----DGIGLNRTLD 595

Query: 605 LTSSLEVGPA-TNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSV 663
           L S+LE   A  N  +  + S    RSVLTIAFQF +E + ++  A MARQYVR+V++SV
Sbjct: 596 LASTLEDHEAGLNGESKSNGSSSQVRSVLTIAFQFAYEVHTRETCAVMARQYVRTVVASV 655

Query: 664 QRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKN 723
           QRVAMA+ PS   P   P L  G+ +A++LA  I  SY   LG +L+R +  G +++ K 
Sbjct: 656 QRVAMALAPSRGQPR--PAL--GNSDAISLARHILSSYRVQLGMDLVRPEVGGTEALFKV 711

Query: 724 LWQHSDAILCCSLKVPLQF 742
            W HSDAI+CC+ K   +F
Sbjct: 712 FWHHSDAIVCCAWKGTPEF 730


>gi|90110446|gb|ABD90525.1| class III homeodomain-leucine zipper [Psilotum nudum]
          Length = 829

 Score =  843 bits (2177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/736 (58%), Positives = 532/736 (72%), Gaps = 34/736 (4%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K  +D+GKYVRY+ EQVEALER+Y+ECPKPS+LRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 10  KGVMDSGKYVRYSNEQVEALERLYNECPKPSALRRQQLIRECPILSNIEPKQIKVWFQNR 69

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL-RTAPATT 140
           RCREKQRKEA+RLQTVN KLTAMNKLLMEENDRLQKQV+QL+ ENGY++QQL +    TT
Sbjct: 70  RCREKQRKEAARLQTVNGKLTAMNKLLMEENDRLQKQVAQLLRENGYLRQQLPQGGLTTT 129

Query: 141 DASCDSVVT-------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           D SCDSVVT       TPQH   DA   +G+LS+AEE LAEFL KATGTA+DW+QMPGMK
Sbjct: 130 DTSCDSVVTSGLQHLPTPQHPPHDAATHSGILSLAEEALAEFLQKATGTAIDWIQMPGMK 189

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDS G+  IS  C+GVAARAC LV LEP K+ EILK RPSW  DCR L        GN
Sbjct: 190 PGPDSTGMINISHGCTGVAARACSLVGLEPAKVVEILKGRPSWHWDCRQLTKLYSSNVGN 249

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIE+LY Q YAPTTLAPARDF TLRYT+ L++GS V+CERSL+ +   P       FV
Sbjct: 250 NGTIEVLYMQMYAPTTLAPARDFCTLRYTSPLEDGSYVICERSLNNTHGPPTAPHMQSFV 309

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI------ 367
           RAEMLP G LIRPC+G GSI+ IVDH++LE+W+VPEVLRPLYESS  +A ++TI      
Sbjct: 310 RAEMLPCGYLIRPCEGSGSILIIVDHMDLESWTVPEVLRPLYESSAALAHKITIPALRYL 369

Query: 368 ---AETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
              A+ +G  + G+ R+PA +R+ SQRL+RGFNDAVNGF DDGW+ +  DG +DV +A+ 
Sbjct: 370 RHLAQAAGVEIPGV-RRPAAVRSLSQRLARGFNDAVNGFGDDGWTTVPSDGTDDVTVAIK 428

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAA 484
           S  +     +   S     G+LCAKASMLLQNVPPALLVRFLREHRSEWAD+   A S +
Sbjct: 429 SNYNARELGDQFTSGT--AGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGAAANSTS 486

Query: 485 SLKAGSYAYPGMRPTR--FTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
           +L+  ++   G+  T      SQ++    H +E +E LE+I+LEG    +E + + RDI 
Sbjct: 487 ALQINNF---GILDTHGDVCISQVLQQPIHAVEDDEFLELIKLEGR---EEGSTLPRDIF 540

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRT 602
           LLQ+CSG++EN  GA +++VFAPID   PDD PLLPSGFR IPLD+   D     +  RT
Sbjct: 541 LLQLCSGLEENTAGASAQMVFAPIDISIPDDVPLLPSGFRAIPLDNCLLDAG---SPSRT 597

Query: 603 LDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISS 662
           LDL S+L+VG      A +  +  H RSVLT+AFQF F S++Q++  TM+RQYVR+V+S+
Sbjct: 598 LDLASTLDVGSTNGKYANN--AVFHLRSVLTLAFQFSFHSHMQESATTMSRQYVRNVVST 655

Query: 663 VQRVAMAICPSGLSPTLG-PKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVL 721
           VQR+AMA+ PS LSP +G  +  PG+PE +  A WIC+SY   LG +L+  D    D  L
Sbjct: 656 VQRLAMALAPSRLSPHMGSSRQMPGTPEGVNYARWICRSYKCKLGIDLVSVDGERSDEYL 715

Query: 722 KNLWQHSDAILCCSLK 737
           K +WQ  DAI+CCS K
Sbjct: 716 KAVWQCYDAIMCCSCK 731


>gi|90110438|gb|ABD90521.1| class III homeodomain-leucine zipper [Physcomitrella patens]
          Length = 737

 Score =  841 bits (2172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/745 (58%), Positives = 529/745 (71%), Gaps = 45/745 (6%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY ECPKPSS+RR QLI+ECPIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWFQNRRCREK 63

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--------- 137
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  +N  ++QQL   P         
Sbjct: 64  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLDNHALRQQLPNLPVPDGKCRLS 123

Query: 138 -----ATTDASCDSVVT-------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVD 185
                A+TD SCDS VT       T QHS  DA+ PAGLLS+AEETL +FL+KATGTAVD
Sbjct: 124 GQAGVASTDTSCDSAVTGGLPQHLTSQHSSPDAS-PAGLLSMAEETLTDFLAKATGTAVD 182

Query: 186 WVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEV 245
           W+Q+PGMKPGPD++GI AIS  C G+AARACGL +L+ +K+AEILKDRP W +DCR +EV
Sbjct: 183 WIQLPGMKPGPDAIGIIAISHGCVGIAARACGLAALDFSKVAEILKDRPGWSQDCRRMEV 242

Query: 246 FTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPN 305
               P GN GTIELLYTQ YAPTTLAPARDF TLRYTT L++G+LV+CERSL+G   GP 
Sbjct: 243 LGTLPTGNGGTIELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLTGKHNGPT 302

Query: 306 PASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM 365
                 F+RAEM PSG LIRPC+GGG IIHIVDH+  E WSVPEVLRPLYES  V+A + 
Sbjct: 303 MPPVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESPAVLAHKS 362

Query: 366 TI----------AETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDG 415
           TI          AE SGE++   G+ PAV+RT SQRL++GFNDAVNGF DDGW  M  DG
Sbjct: 363 TIAALRYLRRIAAEESGEIIIRNGQHPAVIRTLSQRLTKGFNDAVNGFGDDGWVPMESDG 422

Query: 416 AEDVIIAVNSTKSLSTASNPTNSLAFL--GGILCAKASMLLQNVPPALLVRFLREHRSEW 473
            +DV + +N+T         T+ L F   GGILCAKASMLLQNVPPALL+RFLREHRSEW
Sbjct: 423 MDDVSVMLNATPKSMEGQIATDKLLFSLGGGILCAKASMLLQNVPPALLIRFLREHRSEW 482

Query: 474 ADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQE 533
           AD  +DA +A + +  S  +  +   R +  Q+ +PL    E  E LEV++LEGHS  Q 
Sbjct: 483 ADHEIDANAATAFRGASNGH--VSRGRMSHVQLPLPLAQFGEQGEFLEVVKLEGHSAVQH 540

Query: 534 DAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDT 593
            + +SRD  LLQ+CSG++E AVGA ++LVFAPID    +D PLLPSGFR+IP+DS     
Sbjct: 541 -SVLSRDSFLLQLCSGIEEGAVGAGAQLVFAPIDAAVSEDIPLLPSGFRVIPVDSS---V 596

Query: 594 PDTLTAHRTLDLTSSLEVGPA-TNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMA 652
            D +  +RTLDL S+LE   A  N  +  + S    RSVLTIAFQF +E + ++  A MA
Sbjct: 597 VDGIGLNRTLDLASTLEDHEAGLNGESKSNGSSSQVRSVLTIAFQFAYEVHTRETCAVMA 656

Query: 653 RQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRS 712
           RQYVR+V++SVQRVAMA+ PS   P   P L  G+ +A++LA  I  SY   LG +L+R 
Sbjct: 657 RQYVRTVVASVQRVAMALAPSRGQPR--PAL--GNSDAISLARHILSSYRVQLGMDLVRP 712

Query: 713 DSVGGDSVLKNLWQHSDAILCCSLK 737
           +  G +++ K  W HSDAI+CC+ K
Sbjct: 713 EVGGTEALFKVFWHHSDAIVCCAWK 737


>gi|89953822|gb|ABD75297.1| class III homeodomain-leucine zipper protein C3HDZ1 [Physcomitrella
           patens]
          Length = 833

 Score =  840 bits (2171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/750 (58%), Positives = 531/750 (70%), Gaps = 45/750 (6%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY ECPKPSS+RR QLI+ECPIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWFQNRRCREK 63

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--------- 137
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  +N  ++QQL   P         
Sbjct: 64  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLDNHALRQQLPNLPVPDGKCRLS 123

Query: 138 -----ATTDASCDSVVT-------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVD 185
                A+TD SCDS VT       T QHS  DA+ PAGLLS+AEETL +FL+KATGTAVD
Sbjct: 124 GQAGVASTDTSCDSAVTGGLPQHLTSQHSSPDAS-PAGLLSMAEETLTDFLAKATGTAVD 182

Query: 186 WVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEV 245
           W+Q+PGMKPGPD++GI AIS  C G+AARACGL +L+ +K+AEILKDRP W +DCR +EV
Sbjct: 183 WIQLPGMKPGPDAIGIIAISHGCVGIAARACGLAALDFSKVAEILKDRPGWSQDCRRMEV 242

Query: 246 FTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPN 305
               P GN GTIELLYTQ YAPTTLAPARDF TLRYTT L++G+LV+CERSL+G   GP 
Sbjct: 243 LGTLPTGNGGTIELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLTGKHNGPT 302

Query: 306 PASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM 365
                 F+RAEM PSG LIRPC+GGG IIHIVDH+  E WSVPEVLRPLYES  V+A + 
Sbjct: 303 MPPVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESPAVLAHKS 362

Query: 366 TI----------AETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDG 415
           TI          AE SGE++   G+ PAV+RT SQRL++GFNDAVNGF DDGW  M  DG
Sbjct: 363 TIAALRYLRRIAAEESGEIIIRNGQHPAVIRTLSQRLTKGFNDAVNGFGDDGWVPMESDG 422

Query: 416 AEDVIIAVNSTKSLSTASNPTNSLAFL--GGILCAKASMLLQNVPPALLVRFLREHRSEW 473
            +DV + +N+T         T+ L F   GGILCAKASMLLQNVPPALL+RFLREHRSEW
Sbjct: 423 MDDVSVMLNATPKSMEGQIATDKLLFSLGGGILCAKASMLLQNVPPALLIRFLREHRSEW 482

Query: 474 ADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQE 533
           AD  +DA +A + +  S  +  +   R +  Q+ +PL    E  E LEV++LEGHS  Q 
Sbjct: 483 ADHEIDANAATAFRGASNGH--VSRGRMSHVQLPLPLAQFGEQGEFLEVVKLEGHSAVQH 540

Query: 534 DAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDT 593
            + +SRD  LLQ+CSG++E AVGA ++LVFAPID    +D PLLPSGFR+IP+DS     
Sbjct: 541 -SVLSRDSFLLQLCSGIEEGAVGAGAQLVFAPIDAAVSEDIPLLPSGFRVIPVDSS---V 596

Query: 594 PDTLTAHRTLDLTSSLEVGPA-TNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMA 652
            D +  +RTLDL S+LE   A  N  +  + S    RSVLTIAFQF +E + ++  A MA
Sbjct: 597 VDGIGLNRTLDLASTLEDHEAGLNGESKSNGSSSQVRSVLTIAFQFAYEVHTRETCAVMA 656

Query: 653 RQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRS 712
           RQYVR+V++SVQRVAMA+ PS   P   P L  G+ +A++LA  I  SY   LG +L+R 
Sbjct: 657 RQYVRTVVASVQRVAMALAPSRGQPR--PAL--GNSDAISLARHILSSYRVQLGMDLVRP 712

Query: 713 DSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
           +  G +++ K  W HSDAI+CC+ K   +F
Sbjct: 713 EVGGTEALFKVFWHHSDAIVCCAWKGTPEF 742


>gi|110349524|gb|ABG73237.1| class III HD-Zip protein HB12 [Physcomitrella patens]
          Length = 844

 Score =  840 bits (2171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/750 (58%), Positives = 531/750 (70%), Gaps = 45/750 (6%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY ECPKPSS+RR QLI+ECPIL+NIEPKQIKVWFQNRRCREK
Sbjct: 15  SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWFQNRRCREK 74

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--------- 137
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  +N  ++QQL   P         
Sbjct: 75  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLDNHALRQQLPNLPVPDGKCRLS 134

Query: 138 -----ATTDASCDSVVT-------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVD 185
                A+TD SCDS VT       T QHS  DA+ PAGLLS+AEETL +FL+KATGTAVD
Sbjct: 135 GQAGVASTDTSCDSAVTGGLPQHLTSQHSSPDAS-PAGLLSMAEETLTDFLAKATGTAVD 193

Query: 186 WVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEV 245
           W+Q+PGMKPGPD++GI AIS  C G+AARACGL +L+ +K+AEILKDRP W +DCR +EV
Sbjct: 194 WIQLPGMKPGPDAIGIIAISHGCVGIAARACGLAALDFSKVAEILKDRPGWSQDCRRMEV 253

Query: 246 FTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPN 305
               P GN GTIELLYTQ YAPTTLAPARDF TLRYTT L++G+LV+CERSL+G   GP 
Sbjct: 254 LGTLPTGNGGTIELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLTGKHNGPT 313

Query: 306 PASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM 365
                 F+RAEM PSG LIRPC+GGG IIHIVDH+  E WSVPEVLRPLYES  V+A + 
Sbjct: 314 MPPVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESPAVLAHKS 373

Query: 366 TI----------AETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDG 415
           TI          AE SGE++   G+ PAV+RT SQRL++GFNDAVNGF DDGW  M  DG
Sbjct: 374 TIAALRYLRRIAAEESGEIIIRNGQHPAVIRTLSQRLTKGFNDAVNGFGDDGWVPMESDG 433

Query: 416 AEDVIIAVNSTKSLSTASNPTNSLAFL--GGILCAKASMLLQNVPPALLVRFLREHRSEW 473
            +DV + +N+T         T+ L F   GGILCAKASMLLQNVPPALL+RFLREHRSEW
Sbjct: 434 MDDVSVMLNATPKSMEGQIATDKLLFSLGGGILCAKASMLLQNVPPALLIRFLREHRSEW 493

Query: 474 ADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQE 533
           AD  +DA +A + +  S  +  +   R +  Q+ +PL    E  E LEV++LEGHS  Q 
Sbjct: 494 ADHEIDANAATAFRGASNGH--VSRGRMSHVQLPLPLAQFGEQGEFLEVVKLEGHSAVQH 551

Query: 534 DAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDT 593
            + +SRD  LLQ+CSG++E AVGA ++LVFAPID    +D PLLPSGFR+IP+DS     
Sbjct: 552 -SVLSRDSFLLQLCSGIEEGAVGAGAQLVFAPIDAAVSEDIPLLPSGFRVIPVDSS---V 607

Query: 594 PDTLTAHRTLDLTSSLEVGPA-TNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMA 652
            D +  +RTLDL S+LE   A  N  +  + S    RSVLTIAFQF +E + ++  A MA
Sbjct: 608 VDGIGLNRTLDLASTLEDHEAGLNGESKSNGSSSQVRSVLTIAFQFAYEVHTRETCAVMA 667

Query: 653 RQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRS 712
           RQYVR+V++SVQRVAMA+ PS   P   P L  G+ +A++LA  I  SY   LG +L+R 
Sbjct: 668 RQYVRTVVASVQRVAMALAPSRGQPR--PAL--GNSDAISLARHILSSYRVQLGMDLVRP 723

Query: 713 DSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
           +  G +++ K  W HSDAI+CC+ K   +F
Sbjct: 724 EVGGTEALFKVFWHHSDAIVCCAWKGTPEF 753


>gi|168828707|gb|ACA33840.1| class III HD-Zip transcription factor HDZ31 [Pinus pinaster]
          Length = 628

 Score =  840 bits (2169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/591 (69%), Positives = 476/591 (80%), Gaps = 16/591 (2%)

Query: 160 NPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLV 219
           +PAGLLSIAEETL EFLSKA G AVDWVQMPGMKPGPDS+GI AIS +C+GVAARACGLV
Sbjct: 2   SPAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIGIVAISNTCNGVAARACGLV 61

Query: 220 SLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTL 279
            L+PTK+AEILKDRPSW RDCR L+V T FP GN GTIELLY Q YA TTLA ARDFWTL
Sbjct: 62  GLDPTKVAEILKDRPSWLRDCRCLDVLTAFPTGNGGTIELLYMQTYAATTLASARDFWTL 121

Query: 280 RYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDH 339
           RYTT L++GSLVVCERSLSG+  GP+      FVRAEMLPSG LI+PC+GGGSII IVDH
Sbjct: 122 RYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFVRAEMLPSGYLIQPCEGGGSIIRIVDH 181

Query: 340 LNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFS 389
           ++LE WSVPEVLRPLYESS V+AQ+MTIA          E +GEVV+G GRQPAVLRTFS
Sbjct: 182 MDLEPWSVPEVLRPLYESSTVLAQKMTIAALRRLRQIAQEATGEVVFGWGRQPAVLRTFS 241

Query: 390 QRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNST--KSLSTASNPTNSLAFL-GGIL 446
           QRLSRGFN+AVNGF DDGWSLM  DG EDV IA+NS+  K  +   N +N L  L GGIL
Sbjct: 242 QRLSRGFNEAVNGFTDDGWSLMGSDGVEDVTIAINSSPNKHFAYQVNASNGLTTLGGGIL 301

Query: 447 CAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQI 506
           CAKASMLLQNVPPALLVRFLREHRSEWAD N+DAYSAA+LK+  Y+ PG R   F+GSQ+
Sbjct: 302 CAKASMLLQNVPPALLVRFLREHRSEWADSNIDAYSAAALKSSPYSVPGSRAGGFSGSQV 361

Query: 507 IMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPI 566
           I+PL HT+EHEE LEVI+LEGH L QE+A +SRD+ LLQ+CSG+DE+A GAC+ELVFAPI
Sbjct: 362 ILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSRDMFLLQLCSGIDEHAAGACAELVFAPI 421

Query: 567 DEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCH 626
           DE F DD PLLPSGFR+IPL+S+T  +      +RTLDL S+LEVG      +GDS +  
Sbjct: 422 DESFADDAPLLPSGFRVIPLESRTDGSGG---PNRTLDLASALEVGSTGTRTSGDSGTNS 478

Query: 627 HTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPG 686
           + RSVLTIAFQF +ES+ ++NVA MARQYVRSV++SVQRVAMA+ PS L+  +GP+  PG
Sbjct: 479 NLRSVLTIAFQFTYESHSRENVAAMARQYVRSVVASVQRVAMALAPSRLNSHVGPRPPPG 538

Query: 687 SPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           +PEALTLA WICQSY  H+G +L R+D    +SVLK LW HSDAI+CCS+K
Sbjct: 539 TPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVK 589


>gi|56202112|dbj|BAD73204.1| putative homeobox leucine-zipper protein [Oryza sativa Japonica
           Group]
          Length = 886

 Score =  835 bits (2158), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/797 (55%), Positives = 552/797 (69%), Gaps = 94/797 (11%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D  KYVRYT EQVEALER+Y ECPKPSSLRRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 1   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 60

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN--------GYMKQ----- 131
           EKQRKE+SRLQ +NRKLTAMNKLLMEENDRLQKQVSQLV ++        G M++     
Sbjct: 61  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 120

Query: 132 ---------QLRTAPATTDASCDSVVTTP-----------QHSLRDANNPAGLLSIAEET 171
                    QL TA   TD SC+SVVT+            Q   RDA +PAGL+SIAEET
Sbjct: 121 PQAAAAAGHQLATA---TDTSCESVVTSGHHHQQQQHNVVQPPPRDA-SPAGLMSIAEET 176

Query: 172 LAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILK 231
           L EFLSKATGTAV+W+QMPGMKPGPDS+GI AIS  C+GVAARACGLV +EP K+AEILK
Sbjct: 177 LTEFLSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILK 236

Query: 232 DRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQA-------------------------YA 266
           DRP W RDCRS++V  + PAG  GTIELLY QA                         YA
Sbjct: 237 DRPLWLRDCRSMDVVNVLPAGANGTIELLYMQARTHKPENSEPEPEILKLKFVFDLQLYA 296

Query: 267 PTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRP 326
           PTTLAPARDFW LRYT+ LD+GSLVVCERSLS    GP+      F+R EMLPSG LIRP
Sbjct: 297 PTTLAPARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRP 356

Query: 327 CDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEVVY 376
            D GGS+IHIVDH++LE WSVPEV+RPLYESS +VAQ++++A          E +  V+ 
Sbjct: 357 SDVGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKISMAALRYLRQVAHEDTRSVIT 416

Query: 377 GLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPT 436
           G GRQPA LR  SQ+L+RGFN+A+NG  DDGWS++  DG +DV I+VNS+K +   +  +
Sbjct: 417 GWGRQPAALRALSQKLTRGFNEALNGLADDGWSVIESDGVDDVCISVNSSKVIGCNATFS 476

Query: 437 NSLAFLG-GILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPG 495
           + L  +  G+LCAKASMLLQ+V P  L++FLREHRS+WAD N+DA+ A+++K      P 
Sbjct: 477 SGLPIVSTGVLCAKASMLLQDVSPPSLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPM 536

Query: 496 MRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAV 555
            R   F+G Q+I+PL HT E EE LEVI+L G++   +D  V RD+ LLQ+ +GV+E++ 
Sbjct: 537 SRLGGFSG-QVILPLAHTFEPEEFLEVIKL-GNASNYQDTLVHRDLFLLQMYNGVEESSA 594

Query: 556 GACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP-- 613
           G CSEL+FAPID  F DD PLLPSGFRIIP+DS      DT + + TLDL S+LE     
Sbjct: 595 GTCSELIFAPIDASFSDDSPLLPSGFRIIPIDSPL----DTSSPNCTLDLASTLEAATPR 650

Query: 614 -------ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRV 666
                          +++   +++V+TIAFQF F+ +LQD+VA MARQY+R++ISSVQR+
Sbjct: 651 SRISGVNGGGGGCAAAAASSSSKAVMTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRI 710

Query: 667 AMAICPSGL----SPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVG--GDSV 720
           A+A+  S L    +     +LSP +PEA TL  WICQSY +H G EL++S       +S+
Sbjct: 711 AVALSSSRLVPPGAGAAAAQLSPVTPEAATLPRWICQSYRFHFGDELIKSVDANSSNESI 770

Query: 721 LKNLWQHSDAILCCSLK 737
           LK +W H  AILCCSLK
Sbjct: 771 LKAVWHHPSAILCCSLK 787


>gi|168024520|ref|XP_001764784.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|90110442|gb|ABD90523.1| class III homeodomain-leucine zipper [Physcomitrella patens]
 gi|162684078|gb|EDQ70483.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  821 bits (2120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/777 (54%), Positives = 532/777 (68%), Gaps = 75/777 (9%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY ECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 63

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--------- 137
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN  ++QQ+   P         
Sbjct: 64  QRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFPDGRHRLP 123

Query: 138 ------------------------------------ATTDASCDSVVT-------TPQHS 154
                                               A+TD SCDS VT       TPQHS
Sbjct: 124 SQILQSPLKKEGAVNGGDESSTQGGICVKVHGQAGIASTDTSCDSAVTGGLPHRLTPQHS 183

Query: 155 LRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAAR 214
            RD++ PAGLL+ AEETL EFL+KATGTAVDW+Q+PGMKPGPD++GI AIS  C G+AAR
Sbjct: 184 PRDSS-PAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAAR 242

Query: 215 ACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPAR 274
           ACGLV+L+ +K+ E+LKDRP W +DCR +E+    P GN GTIELLYTQ YAPTTLAPAR
Sbjct: 243 ACGLVALDISKVTEVLKDRPRWLQDCRRMEILGALPTGNGGTIELLYTQMYAPTTLAPAR 302

Query: 275 DFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSII 334
           D+ TLRYTT L++G++V+CERSLSG   GP       FVR EM PSG LIRPCDGGG II
Sbjct: 303 DYCTLRYTTILEDGNVVICERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCDGGGCII 362

Query: 335 HIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI----------AETSGEVVYGLGRQPAV 384
           H+VDH N E WSVPEVLRPLYES  V++Q+ T+          AE SGE V   G+ PAV
Sbjct: 363 HVVDHYNNEPWSVPEVLRPLYESPAVLSQKSTLAALRHLRRLAAEESGEGVPRNGQHPAV 422

Query: 385 LRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL-- 442
           LRT  QRL++GFN+AVNGF DDGW     DG +DV + +N+T         ++ L +   
Sbjct: 423 LRTLCQRLTKGFNNAVNGFPDDGWEATISDGLDDVSVMLNATPKSMEGQIASDKLLYSLG 482

Query: 443 GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFT 502
           GGILCAKASMLLQNVP +LL+RFLREHRSEWAD+++DA  A+    G+   P  R    +
Sbjct: 483 GGILCAKASMLLQNVPSSLLIRFLREHRSEWADYDIDANVASFRSNGNGYVP--RCGGVS 540

Query: 503 GSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELV 562
             Q+ +PL ++ E  E+LEV+++EGHS  Q    +SRD  LLQ+CSGVDE+AVGAC++LV
Sbjct: 541 HVQLPLPLAYSGESGEILEVVKVEGHSSVQH-MVLSRDTFLLQLCSGVDESAVGACAQLV 599

Query: 563 FAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP--ATNPAAG 620
           FAP+D    DD PLLPSGF + P+D+   +  D     RTLDL S+LE G     N  A 
Sbjct: 600 FAPVDVALADDIPLLPSGFCVSPIDT---NVVDGFGLDRTLDLASTLEGGNDLRLNGDAK 656

Query: 621 DSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLG 680
            S+S    RSVLTIAFQF +E + ++ VA MARQYVR+V++SVQ+VAMA+ PS  +P   
Sbjct: 657 SSNSPGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRNVVASVQQVAMALAPSRGAPP-- 714

Query: 681 PKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           P+  P +P+AL+L   +  SY +H+G +L+R ++   +++ K  W H+DAI+CC+LK
Sbjct: 715 PRQVPSNPDALSLVRHVLSSYRFHMGIDLIRPENGSDEALFKAFWHHTDAIVCCALK 771


>gi|89514849|gb|ABD75299.1| class III homeodomain-leucine zipper protein HB10 [Physcomitrella
           patens]
 gi|110349520|gb|ABG73235.1| class III HD-Zip protein HB10 [Physcomitrella patens]
          Length = 880

 Score =  821 bits (2120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/777 (54%), Positives = 532/777 (68%), Gaps = 75/777 (9%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY ECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 13  SGKYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 72

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--------- 137
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN  ++QQ+   P         
Sbjct: 73  QRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFPDGRHRLP 132

Query: 138 ------------------------------------ATTDASCDSVVT-------TPQHS 154
                                               A+TD SCDS VT       TPQHS
Sbjct: 133 SQILQSPLKKEGAVNGGDESSTQGGICVKVHGQAGIASTDTSCDSAVTGGLPHRLTPQHS 192

Query: 155 LRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAAR 214
            RD++ PAGLL+ AEETL EFL+KATGTAVDW+Q+PGMKPGPD++GI AIS  C G+AAR
Sbjct: 193 PRDSS-PAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAAR 251

Query: 215 ACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPAR 274
           ACGLV+L+ +K+ E+LKDRP W +DCR +E+    P GN GTIELLYTQ YAPTTLAPAR
Sbjct: 252 ACGLVALDISKVTEVLKDRPRWLQDCRRMEILGALPTGNGGTIELLYTQMYAPTTLAPAR 311

Query: 275 DFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSII 334
           D+ TLRYTT L++G++V+CERSLSG   GP       FVR EM PSG LIRPCDGGG II
Sbjct: 312 DYCTLRYTTILEDGNVVICERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCDGGGCII 371

Query: 335 HIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI----------AETSGEVVYGLGRQPAV 384
           H+VDH N E WSVPEVLRPLYES  V++Q+ T+          AE SGE V   G+ PAV
Sbjct: 372 HVVDHYNNEPWSVPEVLRPLYESPAVLSQKSTLAALRHLRRLAAEESGEGVPRNGQHPAV 431

Query: 385 LRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL-- 442
           LRT  QRL++GFN+AVNGF DDGW     DG +DV + +N+T         ++ L +   
Sbjct: 432 LRTLCQRLTKGFNNAVNGFPDDGWEATISDGLDDVSVMLNATPKSMEGQIASDKLLYSLG 491

Query: 443 GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFT 502
           GGILCAKASMLLQNVP +LL+RFLREHRSEWAD+++DA  A+    G+   P  R    +
Sbjct: 492 GGILCAKASMLLQNVPSSLLIRFLREHRSEWADYDIDANVASFRSNGNGYVP--RCGGVS 549

Query: 503 GSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELV 562
             Q+ +PL ++ E  E+LEV+++EGHS  Q    +SRD  LLQ+CSGVDE+AVGAC++LV
Sbjct: 550 HVQLPLPLAYSGESGEILEVVKVEGHSSVQH-MVLSRDTFLLQLCSGVDESAVGACAQLV 608

Query: 563 FAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP--ATNPAAG 620
           FAP+D    DD PLLPSGF + P+D+   +  D     RTLDL S+LE G     N  A 
Sbjct: 609 FAPVDVALADDIPLLPSGFCVSPIDT---NVVDGFGLDRTLDLASTLEGGNDLRLNGDAK 665

Query: 621 DSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLG 680
            S+S    RSVLTIAFQF +E + ++ VA MARQYVR+V++SVQ+VAMA+ PS  +P   
Sbjct: 666 SSNSPGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRNVVASVQQVAMALAPSRGAPP-- 723

Query: 681 PKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           P+  P +P+AL+L   +  SY +H+G +L+R ++   +++ K  W H+DAI+CC+LK
Sbjct: 724 PRQVPSNPDALSLVRHVLSSYRFHMGIDLIRPENGSDEALFKAFWHHTDAIVCCALK 780


>gi|7209912|dbj|BAA92366.1| homeobox protein PpHB10 [Physcomitrella patens]
          Length = 880

 Score =  818 bits (2113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/777 (54%), Positives = 532/777 (68%), Gaps = 75/777 (9%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY ECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 13  SGKYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 72

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--------- 137
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN  ++QQ+   P         
Sbjct: 73  QRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFPDGRHRLP 132

Query: 138 ------------------------------------ATTDASCDSVVT-------TPQHS 154
                                               A+TD SCDS VT       TPQHS
Sbjct: 133 SQILQSPLKKEGAVNGGDESSTQGGICVKVHGQAGIASTDTSCDSAVTGGLPHRLTPQHS 192

Query: 155 LRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAAR 214
            RD++ PAGLL+ AEETL EFL+KATGTAVDW+Q+PGMKPGPD++GI AIS  C G+AAR
Sbjct: 193 PRDSS-PAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAAR 251

Query: 215 ACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPAR 274
           ACGLV+L+ +K+ E+LKDRP W +DCR +E+    P GN GTIELLYTQ YAPTTLAPAR
Sbjct: 252 ACGLVALDISKVTEVLKDRPRWLQDCRRMEILGALPTGNGGTIELLYTQMYAPTTLAPAR 311

Query: 275 DFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSII 334
           D+ TLRYTT L++G++V+CERSLSG   GP       FVR EM PSG LIRPCDGGG II
Sbjct: 312 DYCTLRYTTILEDGNVVICERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCDGGGCII 371

Query: 335 HIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI----------AETSGEVVYGLGRQPAV 384
           H+VDH N E  SVPEVLRPLYES  V++Q+ T+          AE SGE V   G+ PAV
Sbjct: 372 HVVDHYNNEPRSVPEVLRPLYESPAVLSQKSTLAALRHLRRLAAEESGEGVPRNGQHPAV 431

Query: 385 LRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL-- 442
           LRT  QRL++GFN+AVNGF DDGW     DG +DV + +N+T         ++ L +   
Sbjct: 432 LRTLCQRLTKGFNNAVNGFPDDGWEATISDGLDDVSVMLNATPKSMEGQIASDKLLYSLG 491

Query: 443 GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFT 502
           GGILCAKASMLLQNVPP+LL+RFLREHRSEWAD+++DA  A+    G+   P  R    +
Sbjct: 492 GGILCAKASMLLQNVPPSLLIRFLREHRSEWADYDIDANVASFRSNGNGYVP--RCGGVS 549

Query: 503 GSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELV 562
             Q+ +PL ++ E  E+LEV+++EGHS  Q    +SRD  LLQ+CSGVDE+AVGAC++LV
Sbjct: 550 HVQLPLPLAYSGESGEILEVVKVEGHSSVQH-MVLSRDTFLLQLCSGVDESAVGACAQLV 608

Query: 563 FAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP--ATNPAAG 620
           FAP+D    DD PLLP GF + P+D+   +  D     RTLDL S+LE G    +N  A 
Sbjct: 609 FAPVDVALADDIPLLPPGFCVSPIDT---NVVDGFGLDRTLDLASTLEGGNDLRSNGDAK 665

Query: 621 DSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLG 680
            S+S    RSVLTIAFQF +E + ++ VA MARQYVR+V++SVQ+VAMA+ PS  +P   
Sbjct: 666 SSNSPGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRNVVASVQQVAMALAPSRGAPP-- 723

Query: 681 PKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           P+  P +P+AL+L   +  SY +H+G +L+R ++   +++ K  W H+DAI+CC+LK
Sbjct: 724 PRQVPSNPDALSLVRHVLSSYRFHMGIDLIRPENGSDEALFKAFWHHTDAIVCCALK 780


>gi|110349528|gb|ABG73239.1| class III HD-Zip protein HB14 [Physcomitrella patens]
          Length = 875

 Score =  810 bits (2091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/780 (54%), Positives = 527/780 (67%), Gaps = 75/780 (9%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY ECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 13  SGKYVRYTNEQVEALERVYHECPKPSSVRRHQLIKESPILANIEPKQIKVWFQNRRCREK 72

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--------- 137
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN  ++QQ+   P         
Sbjct: 73  QRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFPDGRHRLP 132

Query: 138 ---------------------------------ATTDASCDSVVT-------TPQHSLRD 157
                                            A+TD SCDS VT       TPQHS RD
Sbjct: 133 SHSPLKIEGAVNGGDESSTQGGICVKLPGQAGVASTDTSCDSAVTGGLPHRVTPQHSPRD 192

Query: 158 ANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACG 217
             +PAGLL+ AEETL EFL+KATGTAVDW+Q+PGMKPGPD++GI AIS  C G+AARACG
Sbjct: 193 -TSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACG 251

Query: 218 LVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFW 277
           LV+L+ +K+ E+LKDRP+W +DCR +EV       N GTIELLYTQ YAPTTLAPARD+ 
Sbjct: 252 LVALDASKVTEVLKDRPAWLQDCRRMEVLGALSTANGGTIELLYTQMYAPTTLAPARDYC 311

Query: 278 TLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIV 337
           TLRYTT L++G+LV+CERSL+G   G        FVR EM  SG LIRPC+GGG IIH+V
Sbjct: 312 TLRYTTILEDGNLVICERSLTGGQGGHTMPPVQSFVRGEMYSSGYLIRPCEGGGCIIHVV 371

Query: 338 DHLNLEAWSVPEVLRPLYESSKVVAQRMTI----------AETSGEVVYGLGRQPAVLRT 387
           DH + E W VPEVLRPLYES  V+AQ+ TI          AE SGE V   G  PAVLR 
Sbjct: 372 DHYDKEPWRVPEVLRPLYESPAVLAQKSTIGALRHLRRLAAEESGEGVPRNGHHPAVLRI 431

Query: 388 FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL--GGI 445
             QRL++GFNDAVNGF DDGW     DG +DV + VN+T         ++ L +   GGI
Sbjct: 432 LGQRLTKGFNDAVNGFGDDGWETTVTDGLDDVSVMVNATPKSMEGQIASDKLLYSLGGGI 491

Query: 446 LCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQ 505
           LCAKASMLLQNVPP+LL+RFLREHRSEWAD+++D    AS ++    Y   R    +  Q
Sbjct: 492 LCAKASMLLQNVPPSLLIRFLREHRSEWADYDMD--DMASFRSNGNGYV-PRGGGVSHVQ 548

Query: 506 IIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAP 565
           + +PL  + E  E+LEV++LEGHS  Q    +SRDI LLQ+CSG+DE+A+GACS+L+FAP
Sbjct: 549 LPLPLAQSGECGEILEVVKLEGHSSVQH-MVLSRDIFLLQLCSGIDESALGACSQLIFAP 607

Query: 566 IDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP--ATNPAAGDSS 623
           +D    D  PLLPSGF + P+D+   +  D     RTLDL S+LE G     N     +S
Sbjct: 608 VDVALADGIPLLPSGFCVSPIDT---NVVDGFGLDRTLDLASTLEGGNDLRLNGDVKSNS 664

Query: 624 SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPS-GLSPTLGPK 682
           S    RSVLTIAFQF +E + ++ VA MARQYVR+V++SVQRVAMA+ PS G +P   P+
Sbjct: 665 SSGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRTVVASVQRVAMALAPSRGAAP---PR 721

Query: 683 LSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
            +P +P+AL+LA  +  SY +HLG +L+R ++   +++ K  W H+DAI+CC+ K   +F
Sbjct: 722 QAPSNPDALSLACHVLSSYRFHLGIDLVRPENGSDEALFKAFWHHTDAIVCCAWKGMPEF 781


>gi|168045580|ref|XP_001775255.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673468|gb|EDQ59991.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 870

 Score =  808 bits (2088), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/779 (54%), Positives = 525/779 (67%), Gaps = 79/779 (10%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY ECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTNEQVEALERVYHECPKPSSVRRHQLIKESPILANIEPKQIKVWFQNRRCREK 63

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--------- 137
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN  ++QQ+   P         
Sbjct: 64  QRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFPDGRHRLP 123

Query: 138 -------------------------------------ATTDASCDSVVT-------TPQH 153
                                                A+TD SCDS VT       TPQH
Sbjct: 124 SHVNLQSPLKIEGAVNGGDESSTQGGICVKLPGQAGVASTDTSCDSAVTGGLPHRVTPQH 183

Query: 154 SLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAA 213
           S RD  +PAGLL+ AEETL EFL+KATGTAVDW+Q+PGMKPGPD++GI AIS  C G+AA
Sbjct: 184 SPRD-TSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAA 242

Query: 214 RACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPA 273
           RACGLV+L+ +K+ E+LKDRP+W +DCR +EV       N GTIELLYTQ YAPTTLAPA
Sbjct: 243 RACGLVALDASKVTEVLKDRPAWLQDCRRMEVLGALSTANGGTIELLYTQMYAPTTLAPA 302

Query: 274 RDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSI 333
           RD+ TLRYTT L++G+LV+CERSL+G   G        FVR EM  SG LIRPC+GGG I
Sbjct: 303 RDYCTLRYTTILEDGNLVICERSLTGGQGGHTMPPVQSFVRGEMYSSGYLIRPCEGGGCI 362

Query: 334 IHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI----------AETSGEVVYGLGRQPA 383
           IH+VDH + E W VPEVLRPLYES  V+AQ+ TI          AE SGE V   G  PA
Sbjct: 363 IHVVDHYDKEPWRVPEVLRPLYESPAVLAQKSTIGALRHLRRLAAEESGEGVPRNGHHPA 422

Query: 384 VLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL- 442
           VLR   QRL++GFNDAVNGF DDGW     DG +DV + VN+T         ++ L +  
Sbjct: 423 VLRILGQRLTKGFNDAVNGFGDDGWETTVTDGLDDVSVMVNATPKSMEGQIASDKLLYSL 482

Query: 443 -GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRF 501
            GGILCAKASMLLQNVPP+LL+RFLREHRSEWAD+++D    AS ++    Y   R    
Sbjct: 483 GGGILCAKASMLLQNVPPSLLIRFLREHRSEWADYDMD--DMASFRSNGNGYV-PRGGGV 539

Query: 502 TGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSEL 561
           +  Q+ +PL  + E  E+LEV++LEGHS  Q    +SRDI LLQ+CSG+DE+A+GACS+L
Sbjct: 540 SHVQLPLPLAQSGECGEILEVVKLEGHSSVQH-MVLSRDIFLLQLCSGIDESALGACSQL 598

Query: 562 VFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP--ATNPAA 619
           +FAP+D    D  PLLPSGF + P+D+   +  D     RTLDL S+LE G     N   
Sbjct: 599 IFAPVDVALADGIPLLPSGFCVSPIDT---NVVDGFGLDRTLDLASTLEGGNDLRLNGDV 655

Query: 620 GDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPS-GLSPT 678
             +SS    RSVLTIAFQF +E + ++ VA MARQYVR+V++SVQRVAMA+ PS G +P 
Sbjct: 656 KSNSSSGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRTVVASVQRVAMALAPSRGAAP- 714

Query: 679 LGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
             P+ +P +P+AL+LA  +  SY +HLG +L+R ++   +++ K  W H+DAI+CC+ K
Sbjct: 715 --PRQAPSNPDALSLACHVLSSYRFHLGIDLVRPENGSDEALFKAFWHHTDAIVCCAWK 771


>gi|110349526|gb|ABG73238.1| class III HD-Zip protein HB13 [Physcomitrella patens]
          Length = 877

 Score =  808 bits (2086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/780 (54%), Positives = 527/780 (67%), Gaps = 73/780 (9%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY ECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 13  SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 72

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--------- 137
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN  ++QQL + P         
Sbjct: 73  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLENHSLRQQLPSLPLTNGTHRLS 132

Query: 138 ---------------------------------ATTDASCDSVVT-------TPQHSLRD 157
                                            A+TD SCDS VT       TP+HS R 
Sbjct: 133 SQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSCDSAVTGGLPHHLTPRHSPR- 191

Query: 158 ANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACG 217
             +PAGLL+ AEETL EFL+KATGTAVDW+Q+PGMKPGPD++GI AIS  C G+AARACG
Sbjct: 192 YTSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACG 251

Query: 218 LVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFW 277
           LV+L+  K+ E+LKDRP+W  DCR +EV    P GN GTIELLYTQ YA TTLAPARD+ 
Sbjct: 252 LVALDAGKVTEVLKDRPAWLEDCRRMEVLGALPTGNRGTIELLYTQMYASTTLAPARDYC 311

Query: 278 TLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIV 337
           TLRYTT L++G+LV+CERSL+G   GP+      FVR EM PSG LIRPCDGGG IIH+V
Sbjct: 312 TLRYTTILEDGNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCIIHVV 371

Query: 338 DHLNLEAWSVPEVLRPLYESSKVVAQRMTI----------AETSGEVVYGLGRQPAVLRT 387
           DH +   WSVPEVLRPLYES  V+AQR TI          AE SGE     G+ PAVLRT
Sbjct: 372 DHYDNGPWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLAAEESGEGNPRNGQHPAVLRT 431

Query: 388 FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL--GGI 445
             QRL++GF +AVNGF DDGW     DG +DV + +N+T         ++ L +   GGI
Sbjct: 432 LGQRLAKGFKNAVNGFADDGWVSTVSDGLDDVSVILNATSQSMEGQIASDKLLYSLGGGI 491

Query: 446 LCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQ 505
           LCAKASMLLQNVPP++L++FLREHRSEWAD+++DA  A S ++    Y   +    +  Q
Sbjct: 492 LCAKASMLLQNVPPSILIKFLREHRSEWADYDMDANLATSFRSNGNGY-APQGGGVSHVQ 550

Query: 506 IIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAP 565
           + +PL ++ EH E+LEV++LE HS  Q    +SRD  LLQ+CSG+DENAVGA ++L+FAP
Sbjct: 551 LPLPLPNSGEHGEILEVVKLEDHSSVQH-MVISRDSFLLQLCSGIDENAVGASAQLIFAP 609

Query: 566 IDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP--ATNPAAGDSS 623
           +D    +D PLLPSGF I P+D+   D  D      TLDL S+LE G     N  +  + 
Sbjct: 610 VDVALTEDIPLLPSGFCISPVDANVLDEFDL---DHTLDLASTLEGGSDLRLNGDSKSNG 666

Query: 624 SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPS-GLSPTLGPK 682
           +  H RSVLTIAFQF +E +  +  A MARQY+R+V+SSVQRVAMA+ PS G +P   P+
Sbjct: 667 TSSHMRSVLTIAFQFAYEVHSHEACAVMARQYLRTVVSSVQRVAMALAPSRGSAP---PR 723

Query: 683 LSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
               +P+AL+LA  + +SY  HLG +L RS++ G +++ K  W H+DAILCC+ K   +F
Sbjct: 724 QMSANPDALSLARHVLRSYRLHLGLDLTRSENGGDETLFKAFWHHTDAILCCAWKGKPEF 783


>gi|90110440|gb|ABD90522.1| class III homeodomain-leucine zipper [Physcomitrella patens]
          Length = 868

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/780 (54%), Positives = 527/780 (67%), Gaps = 73/780 (9%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY ECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 63

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--------- 137
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN  ++QQL + P         
Sbjct: 64  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLENHSLRQQLPSLPLTNGTHRLS 123

Query: 138 ---------------------------------ATTDASCDSVVT-------TPQHSLRD 157
                                            A+TD SCDS VT       TP+HS R 
Sbjct: 124 SQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSCDSAVTGGLPHHLTPRHSPR- 182

Query: 158 ANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACG 217
             +PAGLL+ AEETL EFL+KATGTAVDW+Q+PGMKPGPD++GI AIS  C G+AARACG
Sbjct: 183 YTSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACG 242

Query: 218 LVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFW 277
           LV+L+  K+ E+LKDRP+W  DCR +EV    P GN GTIELLYTQ YA TTLAPARD+ 
Sbjct: 243 LVALDAGKVTEVLKDRPAWLEDCRRMEVLGALPTGNRGTIELLYTQMYASTTLAPARDYC 302

Query: 278 TLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIV 337
           TLRYTT L++G+LV+CERSL+G   GP+      FVR EM PSG LIRPCDGGG IIH+V
Sbjct: 303 TLRYTTILEDGNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCIIHVV 362

Query: 338 DHLNLEAWSVPEVLRPLYESSKVVAQRMTI----------AETSGEVVYGLGRQPAVLRT 387
           DH +   WSVPEVLRPLYES  V+AQR TI          AE SGE     G+ PAVLRT
Sbjct: 363 DHYDNGPWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLAAEESGEGNPRNGQHPAVLRT 422

Query: 388 FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL--GGI 445
             QRL++GF +AVNGF DDGW     DG +DV + +N+T         ++ L +   GGI
Sbjct: 423 LGQRLAKGFKNAVNGFADDGWVSTVSDGLDDVSVILNATSQSMEGQIASDKLLYSLGGGI 482

Query: 446 LCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQ 505
           LCAKASMLLQNVPP++L++FLREHRSEWAD+++DA  A S ++    Y   +    +  Q
Sbjct: 483 LCAKASMLLQNVPPSILIKFLREHRSEWADYDMDANLATSFRSNGNGY-APQGGGVSHVQ 541

Query: 506 IIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAP 565
           + +PL ++ EH E+LEV++LE HS  Q    +SRD  LLQ+CSG+DENAVGA ++L+FAP
Sbjct: 542 LPLPLPNSGEHGEILEVVKLEDHSSVQH-MVISRDSFLLQLCSGIDENAVGASAQLIFAP 600

Query: 566 IDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP--ATNPAAGDSS 623
           +D    +D PLLPSGF I P+D+   D  D      TLDL S+LE G     N  +  + 
Sbjct: 601 VDVALTEDIPLLPSGFCISPVDANVLDEFDL---DHTLDLASTLEGGSDLRLNGDSKSNG 657

Query: 624 SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPS-GLSPTLGPK 682
           +  H RSVLTIAFQF +E +  +  A MARQY+R+V+SSVQRVAMA+ PS G +P   P+
Sbjct: 658 TSSHMRSVLTIAFQFAYEVHSHEACAVMARQYLRTVVSSVQRVAMALAPSRGSAP---PR 714

Query: 683 LSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
               +P+AL+LA  + +SY  HLG +L RS++ G +++ K  W H+DAILCC+ K   +F
Sbjct: 715 QMSANPDALSLARHVLRSYRLHLGLDLTRSENGGDETLFKAFWHHTDAILCCAWKGKPEF 774


>gi|168023519|ref|XP_001764285.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684437|gb|EDQ70839.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/784 (54%), Positives = 527/784 (67%), Gaps = 78/784 (9%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY ECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 63

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--------- 137
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN  ++QQL + P         
Sbjct: 64  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLENHSLRQQLPSLPLTNGTHRLS 123

Query: 138 ------------------------------------ATTDASCDSVVT-------TPQHS 154
                                               A+TD SCDS VT       TP+HS
Sbjct: 124 SQVLQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSCDSAVTGGLPHHLTPRHS 183

Query: 155 LRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAAR 214
            R   +PAGLL+ AEETL EFL+KATGTAVDW+Q+PGMKPGPD++GI AIS  C G+AAR
Sbjct: 184 PR-YTSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAAR 242

Query: 215 ACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPAR 274
           ACGLV+L+  K+ E+LKDRP+W  DCR +EV    P GN GTIELLYTQ YA TTLAPAR
Sbjct: 243 ACGLVALDAGKVTEVLKDRPAWLEDCRRMEVLGALPTGNRGTIELLYTQMYASTTLAPAR 302

Query: 275 DFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSII 334
           D+ TLRYTT L++G+LV+CERSL+G   GP+      FVR EM PSG LIRPCDGGG II
Sbjct: 303 DYCTLRYTTILEDGNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCII 362

Query: 335 HIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI----------AETSGEVVYGLGRQPAV 384
           H+VDH +   WSVPEVLRPLYES  V+AQR TI          AE SGE     G+ PAV
Sbjct: 363 HVVDHYDNGPWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLAAEESGEGNPRNGQHPAV 422

Query: 385 LRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL-- 442
           LRT  QRL++GF +AVNGF DDGW     DG +DV + +N+T         ++ L +   
Sbjct: 423 LRTLGQRLAKGFKNAVNGFADDGWVSTVSDGLDDVSVILNATSQSMEGQIASDKLLYSLG 482

Query: 443 GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFT 502
           GGILCAKASMLLQNVPP++L++FLREHRSEWAD+++DA  A S ++    Y   +    +
Sbjct: 483 GGILCAKASMLLQNVPPSILIKFLREHRSEWADYDMDANLATSFRSNGNGY-APQGGGVS 541

Query: 503 GSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELV 562
             Q+ +PL ++ EH E+LEV++LE HS  Q    +SRD  LLQ+CSG+DENAVGA ++L+
Sbjct: 542 HVQLPLPLPNSGEHGEILEVVKLEDHSSVQH-MVISRDSFLLQLCSGIDENAVGASAQLI 600

Query: 563 FAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDS 622
           FAP+D    +D PLLPSGF I P+D+   D  D      TLDL S+LE G       GDS
Sbjct: 601 FAPVDVALTEDIPLLPSGFCISPVDANVLDEFDL---DHTLDLASTLEGGSDLR-LNGDS 656

Query: 623 SS---CHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPS-GLSPT 678
            S     H RSVLTIAFQF +E +  +  A MARQY+R+V+SSVQRVAMA+ PS G +P 
Sbjct: 657 KSNGTSSHMRSVLTIAFQFAYEVHSHEACAVMARQYLRTVVSSVQRVAMALAPSRGSAP- 715

Query: 679 LGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKV 738
             P+    +P+AL+LA  + +SY  HLG +L RS++ G +++ K  W H+DAILCC+ K 
Sbjct: 716 --PRQMSANPDALSLARHVLRSYRLHLGLDLTRSENGGDETLFKAFWHHTDAILCCAWKG 773

Query: 739 PLQF 742
             +F
Sbjct: 774 KPEF 777


>gi|110349522|gb|ABG73236.1| class III HD-Zip protein HB11 [Physcomitrella patens]
          Length = 880

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/788 (54%), Positives = 527/788 (66%), Gaps = 73/788 (9%)

Query: 19  SINKHQLDN-GKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           S N+  +D+ GKYVRYT EQVEALERVY ECPKPSS+RR QLI+E PIL+NIEPKQIKVW
Sbjct: 8   SWNEQTMDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVW 67

Query: 78  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP 137
           FQNRRCREKQRKEASRL +VN KLTA+NKLLMEEN+RL K  SQL  EN  ++QQL   P
Sbjct: 68  FQNRRCREKQRKEASRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQLPGLP 127

Query: 138 ------------------------------------------ATTDASCDSVVT------ 149
                                                     A+TD SCDS VT      
Sbjct: 128 LTDGRHRLSSQNALKKEGAVNGGDESSTQGGICVRIHGQAGVASTDTSCDSAVTGGLPHR 187

Query: 150 -TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSC 208
            TPQHS RD  +PAGLL+IAEETL +FL+KATGTAVDW+Q+PGMKPGPD++GI AIS  C
Sbjct: 188 LTPQHSPRD-TSPAGLLAIAEETLTDFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGC 246

Query: 209 SGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPT 268
            G+AARACGLV+L+ +K+ E+LKDRP+W +DCR +EV  + P  N GTIELLYTQ YAPT
Sbjct: 247 VGIAARACGLVALDASKVTEVLKDRPAWQQDCRRMEVLGVLPTANGGTIELLYTQMYAPT 306

Query: 269 TLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCD 328
           TLA ARD+ TLRYTT L++G+LV+CERSL G   GP       FVR EM PSG LIRP D
Sbjct: 307 TLASARDYCTLRYTTILEDGNLVICERSLIGGQNGPPMPPVQSFVRGEMFPSGYLIRPSD 366

Query: 329 GGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEVVYGL 378
           GGG IIH+VDH + E WSVPEVLRPLYES  V+AQR TIA          E SGE     
Sbjct: 367 GGGCIIHVVDHYDNERWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLASEESGEGNPRN 426

Query: 379 GRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNS 438
           G+ P VLRT SQRL++GF +AVNGF DDGW     DG EDV + +N+T         ++ 
Sbjct: 427 GQHPVVLRTLSQRLAKGFKNAVNGFGDDGWVSTVSDGLEDVSVMLNATPKSMEGQIASDK 486

Query: 439 LAFL--GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGM 496
           L +   GGILCAKASMLLQNV P+LL+ FLREHRSEWADF++DA  A S ++   +Y   
Sbjct: 487 LLYSLGGGILCAKASMLLQNVSPSLLIGFLREHRSEWADFDIDANVATSFRSNGNSY--A 544

Query: 497 RPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVG 556
           R    +  Q+ +PL H+ EH E+LEV++LEGHS  Q    +SRD  LLQ+CSG+DENAVG
Sbjct: 545 RGGGVSHVQLPLPLAHSGEHGEILEVVKLEGHSSVQH-MVLSRDSFLLQLCSGIDENAVG 603

Query: 557 ACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP--A 614
           A ++L+FAP+D    +D PLLPSGF + P+D+      D     RTLDL S+LE G    
Sbjct: 604 ASAQLIFAPVDVALAEDIPLLPSGFCVSPIDASVVGGFDL---DRTLDLASTLEGGSDLR 660

Query: 615 TNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSG 674
            N     + +    RSVLTIAFQF +E + ++  A MARQYVR+V++SVQRVAMA+ PS 
Sbjct: 661 LNGDTKSNGTSGQMRSVLTIAFQFAYEVHTRETCAVMARQYVRTVVASVQRVAMALAPSR 720

Query: 675 LSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCC 734
               L  + +P +P+A++L   +  SY  HL  +L R ++ G +++ K  W H+DAI+CC
Sbjct: 721 APAPL--RQAPSNPDAISLVRHVLSSYRLHLALDLTRPENRGDEALFKAFWHHTDAIVCC 778

Query: 735 SLKVPLQF 742
           + K   +F
Sbjct: 779 AWKGMPEF 786


>gi|89514847|gb|ABD75298.1| class III homeodomain-leucine zipper protein C3HDZ2 [Physcomitrella
           patens]
          Length = 876

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/780 (54%), Positives = 526/780 (67%), Gaps = 73/780 (9%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY ECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 12  SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 71

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--------- 137
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN  ++QQL + P         
Sbjct: 72  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLENHSLRQQLPSLPLTNGTHRLS 131

Query: 138 ---------------------------------ATTDASCDSVVT-------TPQHSLRD 157
                                            A+TD SCDS VT       TP+HS R 
Sbjct: 132 SQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSCDSAVTGGLPHHLTPRHSPR- 190

Query: 158 ANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACG 217
             +PAGLL+ AEETL EFL+KATGTAVDW+Q+PGMKPGPD++GI AIS  C G+AARACG
Sbjct: 191 YTSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACG 250

Query: 218 LVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFW 277
           LV+L+  K+ E+LKDRP+W  DCR +EV    P GN GTIELLYTQ YA TTLAPARD+ 
Sbjct: 251 LVALDAGKVTEVLKDRPAWLEDCRRMEVLGALPTGNRGTIELLYTQMYASTTLAPARDYC 310

Query: 278 TLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIV 337
           TLRYTT L++G+LV+CERSL+G   GP+      FVR EM PSG LIRPCDGGG IIH+V
Sbjct: 311 TLRYTTILEDGNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCIIHVV 370

Query: 338 DHLNLEAWSVPEVLRPLYESSKVVAQRMTI----------AETSGEVVYGLGRQPAVLRT 387
           DH +   WSVPEVLRPLYES  V+AQR TI          AE SGE     G+ PAVLRT
Sbjct: 371 DHYDNGPWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLAAEESGEGNPRNGQHPAVLRT 430

Query: 388 FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL--GGI 445
             QRL++GF +AVNGF DDGW     DG +DV + +N+T         ++ L +   GGI
Sbjct: 431 LGQRLAKGFKNAVNGFADDGWVSTVSDGLDDVSVILNATSQSMEGQIASDKLLYSLGGGI 490

Query: 446 LCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQ 505
           LCAKASMLLQNVPP++L++FLREHRSEWAD+++DA  A S ++    Y   +    +  Q
Sbjct: 491 LCAKASMLLQNVPPSILIKFLREHRSEWADYDMDANLATSFRSNGNGY-APQGGGVSHVQ 549

Query: 506 IIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAP 565
           + +PL ++ EH E+LEV++LE HS  Q    +SRD  LLQ+CSG+DENAVGA ++L+FAP
Sbjct: 550 LPLPLPNSGEHGEILEVVKLEDHSSVQH-MVISRDSFLLQLCSGIDENAVGASAQLIFAP 608

Query: 566 IDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP--ATNPAAGDSS 623
           +D    +D PLLPSGF I P+D+   D  D      TLDL S+LE G     N  +  + 
Sbjct: 609 VDVALTEDIPLLPSGFCISPVDANVLDEFDL---DHTLDLASTLEGGSDLRLNGDSKSNG 665

Query: 624 SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPS-GLSPTLGPK 682
           +  H RSVLTIAFQF +E +  +  A MARQY+R+V+SSVQRVAMA+ PS G +P   P+
Sbjct: 666 TSSHMRSVLTIAFQFAYEVHSHEACAVMARQYLRTVVSSVQRVAMALAPSRGSAP---PR 722

Query: 683 LSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
               +P+AL+LA  + +SY  HLG +L  S++ G +++ K  W H+DAILCC+ K   +F
Sbjct: 723 QMSANPDALSLARHVLRSYRLHLGLDLTGSENGGDETLFKAFWHHTDAILCCAWKGKPEF 782


>gi|168020051|ref|XP_001762557.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686290|gb|EDQ72680.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 873

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/780 (54%), Positives = 520/780 (66%), Gaps = 78/780 (10%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
           +GKYVRYT EQVEALERVY ECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 63

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP--------- 137
           QRKEASRL +VN KLTA+NKLLMEEN+RL K  SQL  EN  ++QQL   P         
Sbjct: 64  QRKEASRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQLPGLPLTDGRHRLS 123

Query: 138 ---------------------------------------ATTDASCDSVVT-------TP 151
                                                  A+TD SCDS VT       TP
Sbjct: 124 SQATSVLQNALKKEGAVNGGDESSTQGGICVRIHGQAGVASTDTSCDSAVTGGLPHRLTP 183

Query: 152 QHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGV 211
           QHS RD  +PAGLL+IAEETL +FL+KATGTAVDW+Q+PGMKPGPD++GI AIS  C G+
Sbjct: 184 QHSPRD-TSPAGLLAIAEETLTDFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGI 242

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLA 271
           AARACGLV+L+ +K+ E+LKDRP+W +DCR +EV  + P  N GTIELLYTQ YAPTTLA
Sbjct: 243 AARACGLVALDASKVTEVLKDRPAWQQDCRRMEVLGVLPTANGGTIELLYTQMYAPTTLA 302

Query: 272 PARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGG 331
            ARD+ TLRYTT L++G+LV+CERSL G   GP       FVR EM PSG LIRP DGGG
Sbjct: 303 SARDYCTLRYTTILEDGNLVICERSLIGGQNGPPMPPVQSFVRGEMFPSGYLIRPSDGGG 362

Query: 332 SIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQ 381
            IIH+VDH + E WSVPEVLRPLYES  V+AQR TIA          E SGE     G+ 
Sbjct: 363 CIIHVVDHYDNERWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLASEESGEGNPRNGQH 422

Query: 382 PAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAF 441
           P VLRT SQRL++GF +AVNGF DDGW     DG EDV + +N+T         ++ L +
Sbjct: 423 PVVLRTLSQRLAKGFKNAVNGFGDDGWVSTVSDGLEDVSVMLNATPKSMEGQIASDKLLY 482

Query: 442 L--GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPT 499
              GGILCAKASMLLQNV P+LL+ FLREHRSEWADF++DA  A S ++   +Y   R  
Sbjct: 483 SLGGGILCAKASMLLQNVSPSLLIGFLREHRSEWADFDIDANVATSFRSNGNSY--ARGG 540

Query: 500 RFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACS 559
             +  Q+ +PL H+ EH E+LEV++LEGHS  Q    +SRD  LLQ+CSG+DENAVGA +
Sbjct: 541 GVSHVQLPLPLAHSGEHGEILEVVKLEGHSSVQH-MVLSRDSFLLQLCSGIDENAVGASA 599

Query: 560 ELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP--ATNP 617
           +L+FAP+D    +D PLLPSGF + P+D+      D     RTLDL S+LE G     N 
Sbjct: 600 QLIFAPVDVALAEDIPLLPSGFCVSPIDASVVGGFDL---DRTLDLASTLEGGSDLRLNG 656

Query: 618 AAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSP 677
               + +    RSVLTIAFQF +E + ++  A MARQYVR+V++SVQRVAMA+ PS    
Sbjct: 657 DTKSNGTSGQMRSVLTIAFQFAYEVHTRETCAVMARQYVRTVVASVQRVAMALAPSRAPA 716

Query: 678 TLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
            L  + +P +P+A++L   +  SY  HL  +L R ++ G +++ K  W H+DAI+CC+ K
Sbjct: 717 PL--RQAPSNPDAISLVRHVLSSYRLHLALDLTRPENRGDEALFKAFWHHTDAIVCCAWK 774


>gi|89514857|gb|ABD75303.1| class III homeodomain-leucine zipper protein C3HDZ2 [Psilotum
           nudum]
          Length = 819

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/731 (57%), Positives = 513/731 (70%), Gaps = 41/731 (5%)

Query: 28  GKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 87
           GKYVRYT EQV+ALE +Y+ECPKPSSLRRQQLI+ECPILSNIEPKQIKVWFQNRRCREKQ
Sbjct: 17  GKYVRYTTEQVDALESLYNECPKPSSLRRQQLIKECPILSNIEPKQIKVWFQNRRCREKQ 76

Query: 88  RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSV 147
           RKEASRLQ VN KLTAMNKLLMEENDRLQKQV+QL+ ENGY++QQL+    TTD SCDSV
Sbjct: 77  RKEASRLQNVNAKLTAMNKLLMEENDRLQKQVAQLLYENGYIRQQLQHGGITTDTSCDSV 136

Query: 148 VT-------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG 200
           VT       TPQH   DA + +G+LS+AEETL EFL KATGTA+DW+QMPGMKPGPD  G
Sbjct: 137 VTSGLQHLSTPQHPQTDAAH-SGILSLAEETLTEFLGKATGTAIDWIQMPGMKPGPDMTG 195

Query: 201 IFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELL 260
           +  IS  C GVAARACGLV LEP ++ E+LKDRPSW RDCR L         N G +E+L
Sbjct: 196 MVNISHGCPGVAARACGLVGLEPARVVEVLKDRPSWHRDCRQLATLYATNTNNNGKMEVL 255

Query: 261 YTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPS 320
           Y Q YAPTTLAPARDF TLRYT+ L++GS V+CERSL+G+   P       FVRAEM PS
Sbjct: 256 YMQMYAPTTLAPARDFCTLRYTSLLEDGSYVICERSLNGTLGVPTAPPMQSFVRAEMHPS 315

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI---------AETS 371
           G LIRPC+G GS+I IVDH++LE W+VPEVLRPLYESS ++A ++TI         A+ +
Sbjct: 316 GYLIRPCEGSGSVIIIVDHMDLEPWTVPEVLRPLYESSAILAHKITIEAMRHLQQLAQQA 375

Query: 372 GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLST 431
              V G  +QP  + + SQRL+RGFNDAVNGF DDGW+ ++ +G +DV + V        
Sbjct: 376 AIEVPGGVQQPPAVWSLSQRLARGFNDAVNGFADDGWTSVSNEGMDDVTVIVK------- 428

Query: 432 ASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSY 491
            SNP         +LCAKASMLLQNVPP LLVRFLREHRSEWAD N +  +      G  
Sbjct: 429 -SNPKGREL---SVLCAKASMLLQNVPPGLLVRFLREHRSEWADNNSETNALRFSNLGIS 484

Query: 492 AYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVD 551
              G        SQI+ P     + +E LE+++ EG    Q     S D+ LLQ+CSG++
Sbjct: 485 GPCG----DVYNSQILQPQFPADQRDEFLELLKFEG---PQHGTLSSMDMFLLQLCSGIE 537

Query: 552 ENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEV 611
           E+A GA +++VFAPID    DD  LLPSGFR+IPL++ +       T  RTLDL S+LE+
Sbjct: 538 ESAAGASAQIVFAPIDSSISDDVLLLPSGFRVIPLENSSLGGG---TPTRTLDLASTLEI 594

Query: 612 GPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAIC 671
           G      A D+    + RSVLTIAFQF FES++Q+ VATMARQYVRSV SSVQ++AMA+ 
Sbjct: 595 GLGGCKHANDNPML-NLRSVLTIAFQFTFESHIQEKVATMARQYVRSVASSVQQIAMALS 653

Query: 672 PSGL-SPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDA 730
           P  + +P+   +   GSP+ L L HW+CQSY ++LG +L+R +S   +   K +W H DA
Sbjct: 654 PCCMDTPSAPLRKMAGSPKGLALVHWMCQSYRFNLGMDLVRVNSENNEEYFKLVWHHCDA 713

Query: 731 ILCCSLK-VPL 740
           I+CCS K +P+
Sbjct: 714 IMCCSCKSIPI 724


>gi|312282779|dbj|BAJ34255.1| unnamed protein product [Thellungiella halophila]
          Length = 592

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/491 (79%), Positives = 441/491 (89%), Gaps = 15/491 (3%)

Query: 259 LLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEML 318
           + + Q YAPTTLAPARDFWTLRYTT+LDNGS VVCERSLSGSGAGPN ASA+QFVRAEML
Sbjct: 1   MTFRQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEML 60

Query: 319 PSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---------- 368
            SG LIRPCDGGGSIIHIVDHLNLEAWSVP+VLRPLYESSKVVAQ+MTI+          
Sbjct: 61  SSGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALRYIRQLAQ 120

Query: 369 ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKS 428
           E++GE+VYG+GRQPAVLRTFSQRLSRGFNDAVNGF DDGWS M CDGAED+I+A+NSTK 
Sbjct: 121 ESNGELVYGIGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIVAINSTKH 180

Query: 429 LSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKA 488
           L+   N +NSL+FLGG+LCAKASMLLQNVPPA+L+RFLREHRSEWADFNVDAYSAA+LKA
Sbjct: 181 LN---NISNSLSFLGGVLCAKASMLLQNVPPAVLIRFLREHRSEWADFNVDAYSAATLKA 237

Query: 489 GSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICS 548
           G++AYPGMRPTRFTGSQIIMPLGHTIEHEE+LEV+RLEGHSLAQEDAF+SRD+HLLQIC+
Sbjct: 238 GTFAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICT 297

Query: 549 GVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA-HRTLDLTS 607
           G+DENAVGACSEL+FAPI+EMFPDD PL+PSGFR+IP+D+KT D+ D LTA HRTLDLTS
Sbjct: 298 GIDENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDSQDLLTANHRTLDLTS 357

Query: 608 SLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVA 667
           SLEVGP+   A+G+SS+   +R +LTIAFQFPFE+NLQ+NVA MA QYVRSVISSVQRVA
Sbjct: 358 SLEVGPSPENASGNSSANSSSRCILTIAFQFPFENNLQENVAGMACQYVRSVISSVQRVA 417

Query: 668 MAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVG-GDSVLKNLWQ 726
           MAI PSG+SP+LG KLSPGSPEA+TLA WI QSY++HLG+ELL  DS+G  DSVLK LW 
Sbjct: 418 MAISPSGISPSLGSKLSPGSPEAVTLAQWISQSYTHHLGSELLTIDSLGSNDSVLKLLWD 477

Query: 727 HSDAILCCSLK 737
           H DAILCCSLK
Sbjct: 478 HQDAILCCSLK 488


>gi|168828723|gb|ACA33848.1| class III HD-Zip transcription factor HDZ31 [Pinus taeda]
          Length = 590

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/557 (68%), Positives = 446/557 (80%), Gaps = 16/557 (2%)

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDS+GI AIS +C+GVAARACGLV L+PTK+AEI KDRPSW RDCR L+V T FP GN
Sbjct: 1   PGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEIFKDRPSWLRDCRCLDVLTAFPTGN 60

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIELLY Q YA TTLA ARDFWTLRYTT L++GSLVVCERSLSG+  GP+      FV
Sbjct: 61  GGTIELLYMQTYAATTLAFARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFV 120

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEMLPSG LI+PC+GGGSII IVDH++LE WSVPEVLRPLYESS V+AQ+MTIA     
Sbjct: 121 RAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRRL 180

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                E +GEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF DDGWSLM  DG EDV IA+
Sbjct: 181 RQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGSDGVEDVTIAI 240

Query: 424 NST--KSLSTASNPTNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDA 480
           NS+  K  ++  N +N L  L GGILCAKASMLLQNVPPALLVRFLREHRSEWAD N+DA
Sbjct: 241 NSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADSNIDA 300

Query: 481 YSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRD 540
           YSAA+LK+  Y+ PG R   F+GSQ+I+PL HT+EHEE LEVI+LEGH L QE+A +SRD
Sbjct: 301 YSAAALKSSPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSRD 360

Query: 541 IHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAH 600
           + LLQ+CSG+DENA GAC+ELVFAPIDE F DD PLLPSGFR+IPL+S+T  +      +
Sbjct: 361 MFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGG---PN 417

Query: 601 RTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVI 660
           RTLDL S+LEVG      +GDS +  + RSVLTIAFQF +ES+L++NVA MARQYVRSV+
Sbjct: 418 RTLDLASALEVGSTGTRTSGDSGTSSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSVV 477

Query: 661 SSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSV 720
           +SVQRVAMAI PS L+  +GP+  PG+PEALTLA WICQSY  H+G +L R+D    +SV
Sbjct: 478 ASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESV 537

Query: 721 LKNLWQHSDAILCCSLK 737
           LK LW HSDAI+CCS+K
Sbjct: 538 LKLLWHHSDAIMCCSVK 554


>gi|89514853|gb|ABD75301.1| class III homeodomain-leucine zipper protein C3HDZ2 [Selaginella
           kraussiana]
          Length = 840

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/766 (54%), Positives = 516/766 (67%), Gaps = 74/766 (9%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K  +D+GKY+RYT EQVEALERVY+ECPKPSS+RRQQL+RE P+L+NIEP+QIKVWFQNR
Sbjct: 10  KGIMDSGKYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPLLANIEPRQIKVWFQNR 69

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN-----------GYMK 130
           RCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  +QL  +N           G   
Sbjct: 70  RCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHNTQLALDNQYLRQQLQQQTGASD 129

Query: 131 QQLRTAPA---------TTDASCDSVVT--TPQHSL----------RDANNPAGLLSIAE 169
           ++ +T  +           D S DS VT   PQ  +          RD+++ AGLL+IAE
Sbjct: 130 REPKTTSSRRYNNNEVVAADRSPDSEVTGGMPQQHITATTAAPQIARDSSH-AGLLAIAE 188

Query: 170 ETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEI 229
           ETLAEFL+KATGTAVDW+ MPGMKPGPDSVG  AIS   + VAARA GLV LEP+K+AEI
Sbjct: 189 ETLAEFLAKATGTAVDWIHMPGMKPGPDSVGTAAISHGSTSVAARAWGLVGLEPSKVAEI 248

Query: 230 LKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGS 289
           LKDRPSW R+CR LEV   F   N GT+EL+YTQ YAPTTLA  RDFWT+RYT+ L++G 
Sbjct: 249 LKDRPSWHRECRRLEVLRAFSTPNGGTVELVYTQMYAPTTLAAGRDFWTIRYTSFLEDG- 307

Query: 290 LVVCERSLSGSGAGP-NPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVP 348
           LV+CERSL+G   GP N  S + FVRAEMLPSG LIRP +GG   IHIVDH+ LE+W V 
Sbjct: 308 LVICERSLNGIHGGPSNKQSGSDFVRAEMLPSGYLIRPYEGGMCSIHIVDHMELESWKVL 367

Query: 349 EVLRPLYESSKVVAQRMTIAETS--GEVVYGL-----GRQPAVLRTFSQRLSRGFNDAVN 401
           EVLRPLYESS V+AQ+MT+A       +VY        +Q A  R  S+R++RGFN+AVN
Sbjct: 368 EVLRPLYESSSVLAQKMTLAALRYLRRLVYESSVERGAQQIAAWRGVSRRIARGFNEAVN 427

Query: 402 GFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNS----LAFLGGILCAKASMLLQNV 457
            F DDGWS +  DG EDV +A+N+  + S+      S     A  GG+LCAKASMLLQNV
Sbjct: 428 CFTDDGWSTLVTDGVEDVTVAINTNPTASSIGGQLASADRLYAVGGGVLCAKASMLLQNV 487

Query: 458 PPALLVRFLREHRSEWADFNV-DAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEH 516
           PPA L+RFLREHRSEWAD N+ D+     +  G+ A+ G  P         +PL H+ E 
Sbjct: 488 PPATLIRFLREHRSEWADCNITDSSLRHGMARGANAFIGQYP---------VPLIHSSEE 538

Query: 517 EELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPL 576
           EE LEV++LEGH+  Q    + R+  LLQ+CSG D+NAVGAC++LVFAP+D    DD PL
Sbjct: 539 EEFLEVVKLEGHTTGQNGVILPRETVLLQLCSGNDDNAVGACAQLVFAPVDAAVSDDVPL 598

Query: 577 LPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAF 636
           LPSGFR+IPLDS            RTLDL SSLE G A      +  SC H RSVLT+AF
Sbjct: 599 LPSGFRVIPLDSGLDG--------RTLDLASSLE-GGAEGGRFAEEPSC-HLRSVLTMAF 648

Query: 637 QFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHW 696
           QF FE++ +D+VA  ARQYVR+V+ SVQ VA+A+     S  LGP++ P + EAL LA  
Sbjct: 649 QFLFEAHNRDDVAASARQYVRNVMVSVQSVALALA----SFRLGPRVGPRNVEALLLAQQ 704

Query: 697 ICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
           I +SY  + G +L  SD    D+     W H DAILCC+ K   +F
Sbjct: 705 ILRSYKANFGLDLTESDPGSTDA----FWHHKDAILCCTWKTIPEF 746


>gi|110349512|gb|ABG73231.1| class III HD-Zip protein HDZ31 [Selaginella kraussiana]
          Length = 825

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/760 (55%), Positives = 514/760 (67%), Gaps = 74/760 (9%)

Query: 28  GKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 87
           GKYVRYT EQVEALERVY+ECPKPSS+RRQQL+RE P+L+NIEP+QIKVWFQNRRCREKQ
Sbjct: 1   GKYVRYTPEQVEALERVYNECPKPSSIRRQQLLREYPLLANIEPRQIKVWFQNRRCREKQ 60

Query: 88  RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA-------PATT 140
           RKE SRLQ+VN  LTAMNK++MEEN+RL K  +QL  +N Y++QQL+         P TT
Sbjct: 61  RKETSRLQSVNSSLTAMNKIIMEENERLTKHNTQLALDNQYLRQQLQQQTGASDREPKTT 120

Query: 141 -------------DASCDSVVT--TPQHSL----------RDANNPAGLLSIAEETLAEF 175
                        D S DS VT   PQ  +          RD+++ AGLL+IAEETLAEF
Sbjct: 121 SSRRYNNNEVVAADRSPDSEVTGGMPQQHITATTAAPQIARDSSH-AGLLAIAEETLAEF 179

Query: 176 LSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPS 235
           L+KATGTAVDW+ MPGMKPGPDSVG  AIS   + VAARA GLV LEP+K+AEILKDRPS
Sbjct: 180 LAKATGTAVDWIHMPGMKPGPDSVGTAAISHGSTSVAARAWGLVGLEPSKVAEILKDRPS 239

Query: 236 WFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCER 295
           W R+CR LEV   F   N GT+EL+YTQ YAPTTLA  RDFWT+RYT+ L++G LV+CER
Sbjct: 240 WHRECRRLEVLRAFSTPNGGTVELVYTQMYAPTTLAAGRDFWTIRYTSFLEDG-LVICER 298

Query: 296 SLSGSGAGP-NPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPL 354
           SL+G   GP N  S + FVRAEMLPSG LIRP +GG   IHIVDH+ LE+W V EVLRPL
Sbjct: 299 SLNGIHGGPSNKQSGSDFVRAEMLPSGYLIRPYEGGMCSIHIVDHMELESWKVLEVLRPL 358

Query: 355 YESSKVVAQRMTIAETS--GEVVYGL-----GRQPAVLRTFSQRLSRGFNDAVNGFNDDG 407
           YESS V+AQ+MT+A       +VY        +Q A  R  S+R++RGFN+AVN F DDG
Sbjct: 359 YESSSVLAQKMTLAALRYLRRLVYESSVERGAQQIAAWRGVSRRIARGFNEAVNCFTDDG 418

Query: 408 WSLMTCDGAEDVIIAVNSTKSLSTASNPTNS----LAFLGGILCAKASMLLQNVPPALLV 463
           WS +  DG EDV +A+N+  + S+      S     A  GG+LCAKASMLLQNVPPA L+
Sbjct: 419 WSTLVTDGVEDVTVAINTNPTASSIGGQLASADRLYAVGGGVLCAKASMLLQNVPPATLI 478

Query: 464 RFLREHRSEWADFNV-DAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEV 522
           RFLREHRSEWAD N+ D+     +  G+ A+ G  P         +PL H+ E EE LEV
Sbjct: 479 RFLREHRSEWADCNITDSSLRHGMARGANAFIGQYP---------VPLIHSSEEEEFLEV 529

Query: 523 IRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFR 582
           ++LEGH+  Q    + R+  LLQ+CSG D+NAVGAC++LVFAP+D    DD PLLPSGF 
Sbjct: 530 VKLEGHTTGQNGVILPRETVLLQLCSGNDDNAVGACAQLVFAPVDAAVSDDVPLLPSGFH 589

Query: 583 IIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFES 642
           +IPLDS            RTLDL SSLE G A      +  SC H RSVLT+AFQF FE+
Sbjct: 590 VIPLDSGLDG--------RTLDLASSLE-GGAEGGRFAEEPSC-HLRSVLTMAFQFLFEA 639

Query: 643 NLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYS 702
           + +D+VA  ARQYVR+V+ SVQ VA+A+     S  LGP++ P + EAL LA  I +SY 
Sbjct: 640 HNRDDVAASARQYVRNVMVSVQSVALALA----SFRLGPRVGPRNVEALLLAQQILRSYK 695

Query: 703 YHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
            + G +L  SD    D+     W H DA LCC+ K   +F
Sbjct: 696 ANFGLDLTESDPGSTDA----FWHHKDATLCCTWKTIPEF 731


>gi|317160486|gb|ADV04325.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 851

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/763 (50%), Positives = 518/763 (67%), Gaps = 47/763 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           G   K+  D+GKYVRYT EQV+ALE+ YSECPKP++ RRQQLIRECP+LSNIEPKQIKVW
Sbjct: 6   GKDGKYGFDSGKYVRYTEEQVQALEKFYSECPKPNAFRRQQLIRECPLLSNIEPKQIKVW 65

Query: 78  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP 137
           FQNRRCREKQRKEA+RL  +N KL AMNK+L+++ND L KQ  Q V +N ++++QL+   
Sbjct: 66  FQNRRCREKQRKEATRLLALNEKLKAMNKVLVKQNDNLSKQAFQFVSQNNFLRRQLKLLK 125

Query: 138 ATT---DASCDSVVTTPQHS-------LRDAN---------NPAGLLSIAEETLAEFLSK 178
             +   D S D++VTT   S       LR            NPA LL+ AEE L+EFL+K
Sbjct: 126 EQSTNLDGSKDALVTTETSSISRLVSGLRKHRVPQPPPWDVNPAWLLAFAEEALSEFLAK 185

Query: 179 ATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFR 238
           ATGT +DW+Q+PGMKPGPDS+GI A+   C G AARAC LV +E +++A++LKDRP WF 
Sbjct: 186 ATGTGIDWIQIPGMKPGPDSIGIVAVGHGCDGAAARACSLVGMESSRVADVLKDRPGWFC 245

Query: 239 DCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS 298
           DCR +E+   F   +  T+ELLY+Q Y+PTTL  ARDF TLRYT+ L++ +LVVCERSL+
Sbjct: 246 DCRRMEILGAFTTSSGATVELLYSQMYSPTTLTQARDFCTLRYTSVLEDRNLVVCERSLN 305

Query: 299 GSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS 358
                PN      FVRAEML SG LIRPC G GSI++IVDH++LEA   PEVLRP+YESS
Sbjct: 306 LGMVPPNEG----FVRAEMLSSGYLIRPCGGVGSIVYIVDHMDLEAGRAPEVLRPMYESS 361

Query: 359 KVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW 408
            ++AQ+MTI+          E +GEVV G   QPA LR  S R++R FNDA+N F +DGW
Sbjct: 362 AILAQKMTISALRHLRSLAQEAAGEVVTGGTLQPAALRALSLRIARSFNDAINSFPEDGW 421

Query: 409 SLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL-----GGILCAKASMLLQNVPPALLV 463
             +  DG +D+ I++NS+ S  T     +S   L     GG+LCAKASMLLQNVPPA+L+
Sbjct: 422 FSVASDGIDDISISLNSSWSPRTVGLKCSSSNNLWSDGDGGVLCAKASMLLQNVPPAVLI 481

Query: 464 RFLREHRSEWADF---NVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELL 520
           RFLREHRSEWAD+     D   +A+L+   Y    +        ++ MPL H+ EH+E++
Sbjct: 482 RFLREHRSEWADWADCEHDVSCSATLRTRVYGAAALGGAELGRREVPMPLAHS-EHQEIM 540

Query: 521 EVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSG 580
           E+++ EG+  A++ A VS++++LLQ+C+G+DE A+G C++LVFAP+D    DD PLLPSG
Sbjct: 541 ELVKFEGYDSARDGALVSKEMYLLQLCNGIDETAIGDCAQLVFAPVDGALSDDIPLLPSG 600

Query: 581 FRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSS-SCHHTRSVLTIAFQFP 639
           FR+IPLD+   D  D      TLDL S LE G   + A  ++  S ++ RS++TIAFQF 
Sbjct: 601 FRVIPLDT---DFMDGYGMSCTLDLASMLEGGSDMDAAKTETGISSNNLRSIVTIAFQFG 657

Query: 640 FESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQ 699
           +E++  D+V+  AR+Y+R+V++SVQRVAMAI P  +  TLG +   G+ E LTL   I  
Sbjct: 658 YETHNCDSVSVAARKYMRTVVASVQRVAMAIAPR-VGSTLGLRNLSGTSEVLTLVKRIVG 716

Query: 700 SYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
           SY  + G +LLR      + + K +W HSDA++CC+ K   +F
Sbjct: 717 SYRINFGMDLLRKQPSNNEELFKMVWHHSDALICCTCKSLPEF 759


>gi|302772080|ref|XP_002969458.1| hypothetical protein SELMODRAFT_146209 [Selaginella moellendorffii]
 gi|110349516|gb|ABG73233.1| class III HD-Zip protein HDZ31 [Selaginella moellendorffii]
 gi|300162934|gb|EFJ29546.1| hypothetical protein SELMODRAFT_146209 [Selaginella moellendorffii]
          Length = 855

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/768 (54%), Positives = 505/768 (65%), Gaps = 73/768 (9%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           NKH +D GKY+RYT EQVEALERVY+ECPKPSS+RRQQL+RE P+L+NIEP+QIKVWFQN
Sbjct: 10  NKHIMDAGKYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPVLANIEPRQIKVWFQN 69

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN----------GYMK 130
           RRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  EN          G  +
Sbjct: 70  RRCREKQRKETSRLQSVNASLTAMNKIIMEENERLTKHSSQLALENQYLRQQLQQQGGSE 129

Query: 131 QQLRTA---------PATTDASCDSVVT--TPQHSL--------------RDANNPAGLL 165
           + L+ +             D S DS VT   PQ  +              RD+ +PAGLL
Sbjct: 130 RDLKLSRRYANDAQAALAADRSPDSEVTGGMPQQLVAASTTTTTTAPQIARDS-SPAGLL 188

Query: 166 SIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTK 225
           +IAEETL EFL+KA GTAVDW+Q+PGMKPGPDS G  AIS   +GVAARA GLV LEP K
Sbjct: 189 AIAEETLTEFLAKARGTAVDWIQLPGMKPGPDSAGTAAISHGSTGVAARAWGLVGLEPDK 248

Query: 226 IAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTL 285
           +AEILKDR SW RDCR LEV   FP  N GT+EL+YTQ YAPTTLA ARDFWTLRYTT L
Sbjct: 249 VAEILKDRSSWLRDCRRLEVLRAFPTPNGGTVELVYTQMYAPTTLAAARDFWTLRYTTFL 308

Query: 286 DNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAW 345
           D G LVVCE+SLSG    P   +   FVRAEML SG LIRP +G    I+IVDH++LE+W
Sbjct: 309 DEGDLVVCEKSLSGVHGLPAAKAGNDFVRAEMLASGFLIRPFEGNVCSIYIVDHMDLESW 368

Query: 346 SVPEVLRPLYESSKVVAQRMTIAETS--GEVVYGL---------GRQPAVLRTFSQRLSR 394
            V EVLRPLYESS V+AQRMT+        ++Y            +Q A  R  S+R++R
Sbjct: 369 KVHEVLRPLYESSSVLAQRMTLGALRFLRRLIYESPLNENAPRGAQQSAAWRGVSRRIAR 428

Query: 395 GFNDAVNGFNDDGWSLMTCDGAE-DVIIAVNSTKSLSTASN----PTNSLAFLGGILCAK 449
           GFN+AVN F DDGW  M  D  + DV +A+N   + S+       P    A  GG+LCAK
Sbjct: 429 GFNEAVNSFADDGW--MITDAIDGDVTVAINVAPNASSIGGQVMPPDRLYAVGGGVLCAK 486

Query: 450 ASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMP 509
           ASMLLQNVPPA L+RFLREHRSEWAD NV     AS++A +    G       G Q  +P
Sbjct: 487 ASMLLQNVPPATLIRFLREHRSEWADCNV-VLDTASMRASAC---GFSRGNVIG-QCPVP 541

Query: 510 LGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEM 569
           L  + E EE LEV++LEGH+  Q    + R+  LLQ+CSG D+NA G C++LVFAP+D  
Sbjct: 542 LVQSAEEEEFLEVVKLEGHASGQNGVVIPRETVLLQLCSGHDDNATGVCAQLVFAPVDAA 601

Query: 570 FPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTR 629
             +D PLLPSGFR+IPLDS      D+    RTLDL SSLE G A      D S C H R
Sbjct: 602 VSEDVPLLPSGFRVIPLDSGV----DSSGLSRTLDLASSLE-GGADIGKFPDESGC-HLR 655

Query: 630 SVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPE 689
           SVLT+AFQF FE++ +D VAT ARQYVR V++SVQ +AMA+     S  LGP++ P + E
Sbjct: 656 SVLTLAFQFLFEAHNRDEVATSARQYVRHVMASVQSIAMALA----SFRLGPRVGPRNVE 711

Query: 690 ALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           AL LAH I +SY  +  ++L  SD    D+     W H DAILCC+ K
Sbjct: 712 ALLLAHQILRSYRANFASDLTESDPGSTDA----FWHHKDAILCCTWK 755


>gi|302755606|ref|XP_002961227.1| hypothetical protein SELMODRAFT_270225 [Selaginella moellendorffii]
 gi|300172166|gb|EFJ38766.1| hypothetical protein SELMODRAFT_270225 [Selaginella moellendorffii]
          Length = 855

 Score =  751 bits (1939), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/768 (54%), Positives = 506/768 (65%), Gaps = 73/768 (9%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           +KH +D GKY+RYT EQVEALERVY+ECPKPSS+RRQQL+RE P+L+NIEP+QIKVWFQN
Sbjct: 10  SKHIMDAGKYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPVLANIEPRQIKVWFQN 69

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN----------GYMK 130
           RRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  EN          G  +
Sbjct: 70  RRCREKQRKETSRLQSVNASLTAMNKIIMEENERLTKHSSQLALENQYLRQQLQQQGGSE 129

Query: 131 QQLRTA---------PATTDASCDSVVT--TPQHSL--------------RDANNPAGLL 165
           + L+ +             D S DS VT   PQ  +              RD+ +PAGLL
Sbjct: 130 RDLKLSRRYANDAQAALAADRSPDSEVTGGMPQQLVAASTTTTTTAPQIARDS-SPAGLL 188

Query: 166 SIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTK 225
           +IAEETL EFL+KA GTAVDW+Q+PGMKPGPDS G  AIS   +GVAARA GLV LEP K
Sbjct: 189 AIAEETLTEFLAKARGTAVDWIQLPGMKPGPDSAGTAAISHGSTGVAARAWGLVGLEPDK 248

Query: 226 IAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTL 285
           +AEILKDR SW RDCR LEV   FP  N GT+EL+YTQ YAPTTLA ARDFWTLRYTT L
Sbjct: 249 VAEILKDRSSWLRDCRRLEVLRAFPTPNGGTVELVYTQMYAPTTLAAARDFWTLRYTTFL 308

Query: 286 DNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAW 345
           D G LVVCE+SLSG    P   +   FVRAEML SG LIRP +G    I+IVDH++LE+W
Sbjct: 309 DEGDLVVCEKSLSGVHGLPAAKAGNDFVRAEMLASGFLIRPFEGNVCSIYIVDHMDLESW 368

Query: 346 SVPEVLRPLYESSKVVAQRMTIAETS--GEVVYGL---------GRQPAVLRTFSQRLSR 394
            V EVLRPLYESS V+AQRMT+        ++Y            +Q A  R  S+R++R
Sbjct: 369 KVHEVLRPLYESSSVLAQRMTLGALRFLRRLIYESPLNENAPRGAQQSAAWRGVSRRIAR 428

Query: 395 GFNDAVNGFNDDGWSLMTCDGAE-DVIIAVNSTKSLSTASN----PTNSLAFLGGILCAK 449
           GFN+AVN F DDGW  M  D  + DV +A+N   + S+       P    A  GG+LCAK
Sbjct: 429 GFNEAVNSFADDGW--MITDAIDGDVTVAINVAPNASSIGGQVMPPDRLYAVGGGVLCAK 486

Query: 450 ASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMP 509
           ASMLLQNVPPA L+RFLREHRSEWAD NV     AS++A +    G       G Q  +P
Sbjct: 487 ASMLLQNVPPATLIRFLREHRSEWADCNV-VLDTASMRASAC---GFSRGNVIG-QCPVP 541

Query: 510 LGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEM 569
           L  + E EE LEV++LEGH+  Q    + R+  LLQ+CSG D+NA+G C++LVFAP+D  
Sbjct: 542 LVQSAEEEEFLEVVKLEGHASGQNGVVIPRETVLLQLCSGHDDNAMGVCAQLVFAPVDAA 601

Query: 570 FPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTR 629
             +D PLLPSGFR+IPLDS      D+    RTLDL SSLE G A      D S C H R
Sbjct: 602 VSEDVPLLPSGFRVIPLDSGV----DSSGLSRTLDLASSLE-GGADIGKFPDESGC-HLR 655

Query: 630 SVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPE 689
           SVLT+AFQF FE++ +D VAT ARQYVR V++SVQ +AMA+     S  LGP++ P + E
Sbjct: 656 SVLTLAFQFLFEAHNRDEVATSARQYVRHVMASVQSIAMALA----SFRLGPRVGPRNVE 711

Query: 690 ALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           AL LAH I +SY  +  ++L  SD    D+     W H DAILCC+ K
Sbjct: 712 ALLLAHQILRSYRANFASDLTESDPGSTDA----FWHHKDAILCCTWK 755


>gi|222424857|dbj|BAH20380.1| AT1G52150 [Arabidopsis thaliana]
          Length = 702

 Score =  748 bits (1931), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/617 (62%), Positives = 465/617 (75%), Gaps = 38/617 (6%)

Query: 146 SVVTTPQHSL------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSV 199
           SVVT+ QH L      RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKPGPDS+
Sbjct: 1   SVVTSGQHQLASQNPQRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSI 59

Query: 200 GIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIEL 259
           GI AIS  C+GVAARACGLV LEPT++AEI+KDRPSWFR+CR++EV  + P  N GT+EL
Sbjct: 60  GIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVMNVLPTANGGTVEL 119

Query: 260 LYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLP 319
           LY Q YAPTTLAP RDFW LRYT+ L++GSLVVCERSL  +  GP+      FVRAEML 
Sbjct: 120 LYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEMLS 179

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ETSGE 373
           SG LIRPCDGGGSIIHIVDH++LEA SVPEVLRPLYES KV+AQ+ T+A      + + E
Sbjct: 180 SGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQLKQIAQE 239

Query: 374 V------VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
           V      V G GR+PA LR  SQRLSRGFN+AVNGF D+GWS++  D  +DV I VNS+ 
Sbjct: 240 VTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-DSMDDVTITVNSSP 298

Query: 428 SLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAA 484
                 N T +  F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+DAY AA
Sbjct: 299 DKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAYLAA 358

Query: 485 SLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLL 544
           ++K G    P        G Q+I+PL HTIEHEE +EVI+LEG   + EDA V RDI LL
Sbjct: 359 AVKVG----PCSARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDIFLL 414

Query: 545 QICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS-KTPDTPDTLTAHRTL 603
           Q+CSG+DENAVG C+EL+FAPID  F DD PLLPSGFRIIPLDS K   +P+     RTL
Sbjct: 415 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEVSSPN-----RTL 469

Query: 604 DLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVI 660
           DL S+LE+G A   A+ D   +S+C   RSV+TIAF+F  ES++Q++VA+MARQYVR +I
Sbjct: 470 DLASALEIGSAGTKASTDQSGNSTC--ARSVMTIAFEFGIESHMQEHVASMARQYVRGII 527

Query: 661 SSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSV 720
           SSVQRVA+A+ PS +S  +G +   G+PEA TLA WICQSY  ++G ELL+S+S G +S+
Sbjct: 528 SSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSDGNESI 587

Query: 721 LKNLWQHSDAILCCSLK 737
           LKNLW H+DAI+CCS+K
Sbjct: 588 LKNLWHHTDAIICCSMK 604


>gi|402575788|gb|AFQ69084.1| HB8, partial [Pisum sativum]
          Length = 550

 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/542 (67%), Positives = 425/542 (78%), Gaps = 18/542 (3%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           +K  +DNGKYVRYT EQVEALER+Y ECPKP+SLRRQQLIRECPILS+IEPKQIKVWFQN
Sbjct: 11  SKIAMDNGKYVRYTPEQVEALERLYHECPKPTSLRRQQLIRECPILSHIEPKQIKVWFQN 70

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL-RTAPAT 139
           RRCREKQRKEA RLQ VNRKLTAMNKLLMEENDRLQKQVS LV EN   +Q     A AT
Sbjct: 71  RRCREKQRKEAGRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSVFRQHTPNGAIAT 130

Query: 140 TDASCDSVVTT-PQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDS 198
           TD SC+SVVT+  QH  RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKPGPDS
Sbjct: 131 TDTSCESVVTSGQQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDS 189

Query: 199 VGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIE 258
           +GI AIS    GVAARACGLV LEP ++AEILKDR +W+RDCR+++V  +   GN GTIE
Sbjct: 190 IGIVAISHGSPGVAARACGLVGLEPARVAEILKDRLAWYRDCRTVDVLNVMSTGNGGTIE 249

Query: 259 LLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEML 318
           LLY Q YAPTTLAP RDFW LRYT+ L++GSLVVCERSL+    GP+      FVRA++L
Sbjct: 250 LLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNIQNGPSMPPVPHFVRADVL 309

Query: 319 PSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---------- 368
           PSG LIRPC+GGGSIIHIVDH+ LE WSVPEVLRPLYESS ++AQR T+A          
Sbjct: 310 PSGYLIRPCEGGGSIIHIVDHMLLEPWSVPEVLRPLYESSMLLAQRTTMAALRHLRQISQ 369

Query: 369 ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKS 428
           E S   V G GR+PA LRT SQRLS+GFN+AVNGF DDGWS++  DG +DV + VNS+ S
Sbjct: 370 EVSQPSVTGWGRRPAALRTLSQRLSKGFNEAVNGFTDDGWSMLESDGIDDVTLIVNSSPS 429

Query: 429 -LSTASNPTNSLAF---LGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAA 484
            +   +N  N+  F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD ++DAYSAA
Sbjct: 430 KMMGINNGYNNSGFPSVTSSVLCAKASMLLQNVPPAILLRFLREHRSEWADTSIDAYSAA 489

Query: 485 SLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLL 544
           ++KAG  + PG RP  F G Q+I+PL HTIEHEE +EVI+LE     ++D  +  DI LL
Sbjct: 490 AIKAGPCSLPGTRPGSF-GGQVILPLAHTIEHEEFMEVIKLENMGYYRDDMTMPGDIFLL 548

Query: 545 QI 546
           Q+
Sbjct: 549 QL 550


>gi|414868943|tpg|DAA47500.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 673

 Score =  729 bits (1881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/579 (64%), Positives = 444/579 (76%), Gaps = 21/579 (3%)

Query: 176 LSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPS 235
           +SKATGTAV+WVQM GMKPGPDSVGI A+S +CSGVAARACGLVSLEPTK+AEILKDR S
Sbjct: 1   MSKATGTAVNWVQMVGMKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRAS 60

Query: 236 WFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCER 295
           W+RDCR +++  + P GN GTIEL+Y Q YA TTLA  RDFWTLRYT+ LD+GSLV+CER
Sbjct: 61  WYRDCRRVDILHVIPTGNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICER 120

Query: 296 SLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLY 355
           SL+ S  GP+      F+RAE+LPSG LIRPCDGGGS+I+IVDH++L A SVPEVLRPLY
Sbjct: 121 SLTHSTGGPSGPKTPDFIRAEVLPSGYLIRPCDGGGSMIYIVDHVDLNACSVPEVLRPLY 180

Query: 356 ESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFND 405
           ES K++AQ+MT A          E+SGE  YG GRQPAVLRTFSQRLSRGFNDAV+GF D
Sbjct: 181 ESPKILAQKMTAAALRHIRQIAHESSGETPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPD 240

Query: 406 DGW-SLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPAL 461
           DGW SL++ DGAED+ I +NS+ +    S+ + S  F    GGI+CAKASMLLQNVPPAL
Sbjct: 241 DGWSSLLSSDGAEDISITINSSPNKLIGSDVSPSPFFSAMGGGIMCAKASMLLQNVPPAL 300

Query: 462 LVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLE 521
           LVRFLREHRSEWAD  VDAYSAASL+A  Y  PG+R   F G+Q+I+PL  T+EHEE LE
Sbjct: 301 LVRFLREHRSEWADPGVDAYSAASLRANPYNVPGLRAGGFMGNQVILPLARTVEHEECLE 360

Query: 522 VIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGF 581
           VIRL+GH  + ++  +S D+ LLQ+CSG+DE+A GAC++LVFAPIDE F DD PLLPSGF
Sbjct: 361 VIRLQGHGFSHDEVLMSPDMFLLQLCSGIDEDAPGACAQLVFAPIDESFADDAPLLPSGF 420

Query: 582 RIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAA-GDS-SSCHHTRSVLTIAFQFP 639
           R+IPLD+KT    D  +A RTLDL S+LEVG      A  DS S    TRSVLTIAFQF 
Sbjct: 421 RVIPLDAKT----DVPSATRTLDLASALEVGSGGGLCALSDSGSGTRSTRSVLTIAFQFS 476

Query: 640 FESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQ 699
           FE++L+++VA MARQYVR+V++ VQRVAMAI PS L P +  K  PGSPEAL LA WI +
Sbjct: 477 FENHLRESVAAMARQYVRAVMAIVQRVAMAISPSRLGPHVELKHPPGSPEALALASWIGR 536

Query: 700 SYSYHLGAELLRSDSV-GGDSVLKNLWQHSDAILCCSLK 737
           SY  H G E+  SD+     S L   W+HSDAI+CCSLK
Sbjct: 537 SYRAHTGTEIRWSDTEDAAGSPLTLFWKHSDAIICCSLK 575


>gi|302781336|ref|XP_002972442.1| hypothetical protein SELMODRAFT_270954 [Selaginella moellendorffii]
 gi|110349518|gb|ABG73234.1| class III HD-Zip protein HDZ32 [Selaginella moellendorffii]
 gi|300159909|gb|EFJ26528.1| hypothetical protein SELMODRAFT_270954 [Selaginella moellendorffii]
          Length = 840

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/775 (52%), Positives = 500/775 (64%), Gaps = 86/775 (11%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           +K   D GKY+RYT EQVEALERVY ECPKPSS+RRQQ++R+ P+L NIEP+QIKVWFQN
Sbjct: 5   DKSDFDTGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLGNIEPRQIKVWFQN 64

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR------ 134
           RRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  EN  ++QQL+      
Sbjct: 65  RRCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLALENQCLRQQLQQIRSGG 124

Query: 135 -------------------TAPATTDASCDSVVT--TPQH------SLRDANNPAGLLSI 167
                              +A A  D S DS VT   PQH      S RD++ PAGLLSI
Sbjct: 125 GAADPDKKSAAAADRFNDQSALALADRSPDSEVTGGVPQHLAITPQSPRDSS-PAGLLSI 183

Query: 168 AEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIA 227
           AEETL  FL+KATGTAVDW+Q+PGMKPGPDS+G  AIS + +G+AARA GLV LEP ++A
Sbjct: 184 AEETLNSFLAKATGTAVDWIQIPGMKPGPDSIGTAAISHAGAGIAARAWGLVELEPIRVA 243

Query: 228 EILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDN 287
           EILKDRPSW  DCR LEV   FP  N GT+EL+YTQ YAPTTLAPARDFWTLRYT  L++
Sbjct: 244 EILKDRPSWLWDCRRLEVVGSFPTPNGGTLELVYTQMYAPTTLAPARDFWTLRYTIFLED 303

Query: 288 GSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSV 347
            SL VCERSL+G    P       F RAEMLPSG LIRP +GG S IH+VDH +LE+W V
Sbjct: 304 RSLAVCERSLTGIHNKP-AIKNGDFERAEMLPSGFLIRPYEGGVSSIHVVDHWDLESWKV 362

Query: 348 PEVLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFN 397
            EVLRPLYESS ++AQR+T+           E+SGEV+   G+QPA LR FS R++RGFN
Sbjct: 363 LEVLRPLYESSVILAQRVTLGALHHLKRISQESSGEVLMRGGQQPAALRAFSHRIARGFN 422

Query: 398 DAVNGFNDDGWSLMTCDGAEDVIIAVNS-TKSLSTASNPTNSLAFLGGILCAKASMLLQN 456
           DAVN F +DGW   T DG +DV I++N+   + +  +   +     GGILCAK+SMLLQN
Sbjct: 423 DAVNAFAEDGW---TSDGGDDVTISINTALGAKAAGAQGGDRFCAFGGILCAKSSMLLQN 479

Query: 457 VPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEH 516
           VP A L+RFLREHRSEWA  N+ + S ++LK G Y             + + P       
Sbjct: 480 VPAATLIRFLREHRSEWAGVNIASDSVSTLKIGGYGTSKGN----ADEECLFP------- 528

Query: 517 EELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPL 576
            ELLEVI++EG+     +  + +D  LLQ+C+G ++ A G C++LVFAP+D    +D PL
Sbjct: 529 -ELLEVIKMEGYG----NGMLPKDTVLLQLCTGYEDTASGTCAQLVFAPVDPAVSNDIPL 583

Query: 577 LPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGD--SSSCHHTRSVLTI 634
           LPSGFR+IPLD+      D     RTLDLTS+LE G A      D  S S  + RSVLT+
Sbjct: 584 LPSGFRVIPLDNGL----DASALSRTLDLTSTLE-GSADGGKFPDDFSGSGGNMRSVLTM 638

Query: 635 AFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLA 694
           AFQF FE++ ++ +   ARQYVR+V+ SVQ +AMA+    LSP   P+  P   EA   A
Sbjct: 639 AFQFVFEAHNREEIIASARQYVRNVMVSVQSIAMALASYRLSP---PQQGPKQQEAKIFA 695

Query: 695 HWICQSYSYHL-------GAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
             I +SYS  L         E   S     D+     W   +AILCC+ K   +F
Sbjct: 696 LQIMRSYSLGLQRCRASFNVEFNESQPESTDA----FWHDKNAILCCTWKAIPEF 746


>gi|302805045|ref|XP_002984274.1| hypothetical protein SELMODRAFT_180804 [Selaginella moellendorffii]
 gi|300148123|gb|EFJ14784.1| hypothetical protein SELMODRAFT_180804 [Selaginella moellendorffii]
          Length = 836

 Score =  723 bits (1866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/771 (52%), Positives = 498/771 (64%), Gaps = 82/771 (10%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           +K   D GKY+RYT EQVEALERVY ECPKPSS+RRQQ++R+ P+L NIEP+QIKVWFQN
Sbjct: 5   DKSDFDTGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLGNIEPRQIKVWFQN 64

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL------- 133
           RRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  EN  ++QQL       
Sbjct: 65  RRCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLALENQCLRQQLQQIRSGG 124

Query: 134 -------------------RTAPATTDASCDSVVT--TPQH------SLRDANNPAGLLS 166
                              ++A A  D S DS VT   PQH      S RD+ +PAGLLS
Sbjct: 125 GAADPDKKSAAAADRFNDQQSALALADRSPDSEVTGGVPQHLAITPQSPRDS-SPAGLLS 183

Query: 167 IAEETLAEFLSKATGTAVDWVQMPGMK--PGPDSVGIFAISQSCSGVAARACGLVSLEPT 224
           IAEETL  FL+KATGTAVDW+Q+PGMK  PGPDS+G  AIS + +G+AARA GLV LEP 
Sbjct: 184 IAEETLNSFLAKATGTAVDWIQIPGMKACPGPDSIGTAAISHAGAGIAARAWGLVELEPI 243

Query: 225 KIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTT 284
           ++AEILKDRPSW  DCR LEV   FP  N GT+EL+YTQ YAPTTLAPARDFWTLRYT  
Sbjct: 244 RVAEILKDRPSWLWDCRRLEVVGSFPTPNGGTLELVYTQMYAPTTLAPARDFWTLRYTIF 303

Query: 285 LDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEA 344
           L++ SL VCERSL+G    P       F RAEMLPSG LIRP +GG S IH+VDH +LE+
Sbjct: 304 LEDRSLAVCERSLTGIHNKP-AIKNGDFERAEMLPSGFLIRPYEGGVSSIHVVDHWDLES 362

Query: 345 WSVPEVLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSR 394
           W V EVLRPLYESS ++AQR+T+           E+SGEV+   G+QPA LR FS R++R
Sbjct: 363 WKVLEVLRPLYESSVILAQRVTLGALHHLKRISQESSGEVLMRGGQQPAALRAFSHRIAR 422

Query: 395 GFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS-TKSLSTASNPTNSLAFLGGILCAKASML 453
           GFNDAVN F +DGW   T DG +DV I++N+   + +  +   +     GGILCAK+SML
Sbjct: 423 GFNDAVNAFAEDGW---TSDGGDDVTISINTALGAKAAGAQGGDRFCAFGGILCAKSSML 479

Query: 454 LQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHT 513
           LQNVP A L+RFLREHRSEWA  N+ + S ++LK G Y             + + P    
Sbjct: 480 LQNVPAATLIRFLREHRSEWAGVNIASDSVSTLKIGGYGTSKGN----ADEECLFP---- 531

Query: 514 IEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDD 573
               ELLEVI++EG+     +  + +D  LLQ+C+G ++ A G C++LVFAP+D    +D
Sbjct: 532 ----ELLEVIKMEGYG----NGMLPKDTVLLQLCTGYEDTASGTCAQLVFAPVDPAVSND 583

Query: 574 GPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGD--SSSCHHTRSV 631
            PLLPSGFR+IPLD+      D     RTLDLTS+LE G A      D  S S  + RSV
Sbjct: 584 IPLLPSGFRVIPLDNGL----DASALSRTLDLTSTLE-GSADGGKFPDDFSGSGGNMRSV 638

Query: 632 LTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEAL 691
           LT+AFQF FE++ ++ +   ARQYVR+V+ SVQ +AMA+    LSP   P+  P   EA 
Sbjct: 639 LTMAFQFVFEAHNREEIIASARQYVRNVMVSVQSIAMALASYRLSP---PQQGPKQQEAK 695

Query: 692 TLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
             A  I +SY      E   S     D+     W   +AILCC+ K   +F
Sbjct: 696 IFALQIMRSYRASFNVEFNESQPESTDA----FWHDKNAILCCTWKAIPEF 742


>gi|413957204|gb|AFW89853.1| rolled leaf1 [Zea mays]
          Length = 528

 Score =  719 bits (1856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/452 (76%), Positives = 383/452 (84%), Gaps = 11/452 (2%)

Query: 15  SSSGSINK-HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           S SG  +K   +D+GKYVRYT EQVE LER+Y +CPKPSS RRQQL+RECPILSNIEPKQ
Sbjct: 15  SDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQ 74

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           IKVWFQNRRCR+KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL
Sbjct: 75  IKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQL 134

Query: 134 RTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           +      D SC+S VTTP + +RDA+NP+GLL+IAEET  EFLSKATGTA+DWVQMPGMK
Sbjct: 135 QNTSLANDTSCESNVTTPPNPIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 194

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDSVGI AIS  C GVAARACGLV+LEPTK  EILKDRPSWFRDCRSLEVFT FPAGN
Sbjct: 195 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDCRSLEVFTRFPAGN 254

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+Y Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GPN AS  QFV
Sbjct: 255 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASTQQFV 314

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEMLPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT       
Sbjct: 315 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 374

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV+IA 
Sbjct: 375 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVIAC 434

Query: 424 NSTKSLSTASNPTNSLAFLGGILCAKASMLLQ 455
           NSTK +   SN   +    GGI+CAKASMLLQ
Sbjct: 435 NSTKKIRNTSNAGITFGAPGGIICAKASMLLQ 466


>gi|158252034|gb|ABW24026.1| class III HD-Zip protein 8 [Eucommia ulmoides]
          Length = 533

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/535 (66%), Positives = 418/535 (78%), Gaps = 20/535 (3%)

Query: 70  EPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYM 129
           EPKQIKVWFQNRRCREKQRKEASRL+ VNRKLTAMNKLLMEENDRLQKQVSQLV EN Y 
Sbjct: 1   EPKQIKVWFQNRRCREKQRKEASRLRAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYF 60

Query: 130 KQQLRTAP-ATTDASCDSVVTTPQHSL-----RDANNPAGLLSIAEETLAEFLSKATGTA 183
           +QQ + A  ATTD SC+SVVT+ QH L     RDA+ PAGL+SIAEETL EFLSKATGTA
Sbjct: 61  RQQTQNATLATTDTSCESVVTSGQHQLTQHPPRDAS-PAGLMSIAEETLTEFLSKATGTA 119

Query: 184 VDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSL 243
           V+WVQMPGMKPGPDS+GI AIS  C+GVA+RACGLV LEP+++A+ILKDR SWFRDCR++
Sbjct: 120 VEWVQMPGMKPGPDSIGIIAISHGCTGVASRACGLVGLEPSRVADILKDRLSWFRDCRAV 179

Query: 244 EVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAG 303
            V  +    N GTIEL+Y Q YAPTTLAPARDFW LRYT+ L++GSLVVCERSL+ +  G
Sbjct: 180 NVLNVLSTANGGTIELIYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNG 239

Query: 304 PNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQ 363
           P+      FVRAEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS +++Q
Sbjct: 240 PSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLSQ 299

Query: 364 RMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTC 413
           R T+A          E S  VV   GR+PA LR  SQRLS+GFN+AVNGF D+GWS++  
Sbjct: 300 RTTMAALRQLRQISQEVSQPVVANWGRRPAALRALSQRLSKGFNEAVNGFTDEGWSMIES 359

Query: 414 DGAEDVIIAVNST--KSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRS 471
           DG +DV + VNS+  K +S   + TN    +  +LCAKASMLLQNVPPA+L+RFLREHRS
Sbjct: 360 DGIDDVTVLVNSSPGKMMSGDLSYTNGFPSVNAVLCAKASMLLQNVPPAILLRFLREHRS 419

Query: 472 EWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLA 531
           EWAD  +D+YSA+++KA     P  R   F G Q+I+PL HTIEHEE +EVI+LE  +  
Sbjct: 420 EWADSGIDSYSASAVKAVPCCLPVSRAGYF-GGQVILPLAHTIEHEEFMEVIKLENMAHF 478

Query: 532 QEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPL 586
           QED  ++ DI LLQ+CSGVDE ++G C EL+FAPID  F D+ PLLPSGFRIIPL
Sbjct: 479 QEDMIMANDIFLLQLCSGVDEKSIGTCVELIFAPIDASFSDNAPLLPSGFRIIPL 533


>gi|89514861|gb|ABD75305.1| class III homeodomain-leucine zipper protein C3HDZ1 [Ceratopteris
           richardii]
          Length = 844

 Score =  714 bits (1842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/746 (52%), Positives = 500/746 (67%), Gaps = 44/746 (5%)

Query: 26  DNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCRE 85
           D+ KYVRYT EQV+ALER+Y+ECP PSS RR QL+RECPILS IEPKQIKVWFQN  CR+
Sbjct: 14  DSCKYVRYTQEQVQALERLYAECPNPSSFRRLQLLRECPILSKIEPKQIKVWFQNGGCRD 73

Query: 86  KQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR----------- 134
           KQRKEASRL  +N KL+AMN++L+EEN+ L KQ  QLV +N  +++QL+           
Sbjct: 74  KQRKEASRLANLNEKLSAMNRVLVEENESLSKQAIQLVLQNQKIRKQLKQLHCHESSVKL 133

Query: 135 --TAPATTDASCDSVVTTPQHSL-----RDANNPAGLLSIAEETLAEFLSKATGTAVDWV 187
                ++T+ S DSVVT   +       RDA  P  L +IAEETLAEFL+KATGTAV+W+
Sbjct: 134 DQNGLSSTENSSDSVVTNIMNHQTLQLPRDAG-PLRLAAIAEETLAEFLAKATGTAVEWI 192

Query: 188 QMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFT 247
           QMPGMKPGPDS+GI A+S   +G+AARACGLV L+P KI E+LK+RP W  DCR +EV  
Sbjct: 193 QMPGMKPGPDSIGIVAVSDGSNGIAARACGLVGLDPAKIVELLKNRPLWLSDCRRMEVVG 252

Query: 248 MFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA 307
              + + G +ELLY Q YAPTTLA  RDF+TLRYTT LD+ ++VVCERSL  S   P   
Sbjct: 253 TCTSTSGGMVELLYMQFYAPTTLAMPRDFYTLRYTTVLDDCNVVVCERSLPLSHGDPVLP 312

Query: 308 SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI 367
              QFVRA+M  SG LIRP  G GSI+++VDH++L+  +VPEVLRPLYESS V+AQR+T+
Sbjct: 313 PPDQFVRAKMHSSGYLIRPYGGVGSIVYLVDHMDLQPETVPEVLRPLYESSPVLAQRVTM 372

Query: 368 A----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAE 417
                      +  G+     G QPAV+RT +QR++RGFN+A+N  +DDGWS M  DG +
Sbjct: 373 GAMRYLRTVAHDVDGDSSPVRGLQPAVIRTLTQRMARGFNEAINCLSDDGWSSMPSDGMD 432

Query: 418 DVIIAVNSTKSLSTASNPTNSL-----AFLGGILCAKASMLLQNVPPALLVRFLREHRSE 472
           DV IAVN T  +S  S           A   G+LCAK SMLLQNVPPALL+RFLREHRSE
Sbjct: 433 DVTIAVN-TYPVSRISQGQFLFCDRLPAASDGVLCAKTSMLLQNVPPALLIRFLREHRSE 491

Query: 473 WADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQ 532
           WAD  V    AASL  G       R     GS  ++ L H+ E  ELLE+++++  ++ Q
Sbjct: 492 WADLEVCTDIAASL--GHAPLASRRGVSCYGSAPLL-LSHSPEQRELLELLQMDSPTVFQ 548

Query: 533 EDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPD 592
           +  F ++D  LLQ+C+G+DE +VGA ++LVFAP+     +D PL+ SGFR++PLDS   +
Sbjct: 549 DGGFYAKDNFLLQLCTGLDEASVGASAQLVFAPVSVSVSEDMPLVSSGFRVVPLDSSLAN 608

Query: 593 TPDTLTAHRTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
             +     RTLDL S LE G    +P+A    +C   RS+LTIAFQFP E    + VAT+
Sbjct: 609 EHEM---ARTLDLASVLESGGRIISPSADKGPTC-PMRSILTIAFQFPCEIQTFECVATL 664

Query: 652 ARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLR 711
           AR+YVR+V++S+ RVAMA+  S LSP    K +PG+PE L L   + QSY  H G ELL+
Sbjct: 665 ARKYVRTVVASILRVAMALA-SNLSPPADLKQTPGTPELLILVQRMLQSYESHFGIELLK 723

Query: 712 SDSVGGDSVLKNLWQHSDAILCCSLK 737
             S   D++ K LW H DAILCC +K
Sbjct: 724 GHSESIDTLFKLLWHHPDAILCCIVK 749


>gi|109729909|tpg|DAA05768.1| TPA_inf: class III HD-Zip protein CNA2 [Medicago truncatula]
          Length = 518

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/517 (68%), Positives = 407/517 (78%), Gaps = 24/517 (4%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           NKH +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEP+QIKVWFQN
Sbjct: 7   NKHLMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPRQIKVWFQN 66

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT 140
           RRCREKQRKE+ RLQ VNRKLTAMNKLLMEENDRLQKQVS LV ENGY +Q   T  AT 
Sbjct: 67  RRCREKQRKESFRLQGVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRQN--TQNATK 124

Query: 141 DASCDSVVTTPQHSL------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP 194
           D SCDSVVT+ QH++      RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKP
Sbjct: 125 DTSCDSVVTSGQHNMTSQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKP 183

Query: 195 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNA 254
           GPDS+GI AIS  C+GVAARACGLV LEPT++AEILKDRP WFRDCR++++  + P  N 
Sbjct: 184 GPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPLWFRDCRAVDIVNVLPTANG 243

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           GTIELLY Q YAPTTLAPARDFW LRYT+ +++GSL +CERSL  +  GP+      FVR
Sbjct: 244 GTIELLYMQLYAPTTLAPARDFWLLRYTSVVEDGSL-ICERSLKNTQNGPSMPPVPHFVR 302

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ 368
           A+MLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYES  V+AQ+ T+A      
Sbjct: 303 ADMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESPMVLAQKTTMAALRHLR 362

Query: 369 ----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
               E S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GW++M  DG +DV I VN
Sbjct: 363 QISHEVSQPNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTMMGNDGVDDVTILVN 422

Query: 425 STKSLSTASNPTNSLAF---LGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           S+       N +    F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+DAY
Sbjct: 423 SSPDKLMGLNLSFGNGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADHNMDAY 482

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEE 518
           +AA++K G  +  G R   + G Q+I+PL HTIEHEE
Sbjct: 483 TAAAIKVGPCSLTGSRVGNY-GGQVILPLTHTIEHEE 518


>gi|110349514|gb|ABG73232.1| class III HD-Zip protein HDZ32 [Selaginella kraussiana]
          Length = 820

 Score =  711 bits (1835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/765 (52%), Positives = 499/765 (65%), Gaps = 95/765 (12%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LD+GKY+RYT EQVEALERVY ECPKPSS+RRQQ++R+ P+L+NIEP+QIKVWFQNRRCR
Sbjct: 11  LDSGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEPRQIKVWFQNRRCR 70

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT--------- 135
           EKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  +N  ++QQL+          
Sbjct: 71  EKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLSLDNQLLRQQLQQLRNNQDPDR 130

Query: 136 ---------APATTDASCDSVVT--TPQHSL-------RDANNPAGLLSIAEETLAEFLS 177
                    A A  D S DS VT   P H L       RD++ PAGLLSIAEETL  FL+
Sbjct: 131 KSSDRLNDQALALADRSPDSEVTGGVPHHHLTMAPQSPRDSS-PAGLLSIAEETLNSFLA 189

Query: 178 KATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWF 237
           KATGT VDW+Q+PGMKPGPDS+   AIS   +GVAARA GLV LEP ++AEILKDRPSW 
Sbjct: 190 KATGTLVDWIQIPGMKPGPDSISAAAISHGSAGVAARAVGLVDLEPIRVAEILKDRPSWL 249

Query: 238 RDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL 297
            DCR LEV   FP  N GT+EL+Y+Q YAPTTLAPARDFWTLRYT  L++ SLVVCE+SL
Sbjct: 250 WDCRRLEVVGTFPTPNGGTLELIYSQMYAPTTLAPARDFWTLRYTIFLEDRSLVVCEKSL 309

Query: 298 SGS----GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRP 353
           +G+      GP+      F RAEMLPSG LIRP +GG S IHIVDH +LE+W V EVLRP
Sbjct: 310 TGAHGKHKGGPD------FERAEMLPSGFLIRPYEGGVSSIHIVDHYDLESWRVLEVLRP 363

Query: 354 LYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGF 403
           LYESS  +AQR+TIA          E+SGE++   G+QPA LR FS R++RGFNDAVNGF
Sbjct: 364 LYESSVFLAQRVTIAALQHLKRISQESSGEILLRGGQQPAALRAFSHRIARGFNDAVNGF 423

Query: 404 NDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSL------AFLGGILCAKASMLLQNV 457
            +DGW  +  DG + V I +N+  S+++ + P N +        + GILCAK+SMLLQNV
Sbjct: 424 AEDGWVSLVADGIDTVSITINT--SVASKALPGNQVWPDRFSNNISGILCAKSSMLLQNV 481

Query: 458 PPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHE 517
           PPA L+RFLREHRSEW   N          A S +   +R + +  S+         E  
Sbjct: 482 PPATLIRFLREHRSEWVGCN---------SATSDSVSALRISGYGTSK-------GDEEP 525

Query: 518 ELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLL 577
           ELLEVI++EG+        V +D  LLQ+C+G  +N  G C++L+FAP+D    +D PLL
Sbjct: 526 ELLEVIKMEGYGSQS----VPKDTVLLQLCTGYTDNVSGTCAQLIFAPVDPAVTNDMPLL 581

Query: 578 PSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQ 637
           PSGFR+IPLDS +   P  L    TLDL S+L+   A  P   D SS  H RSVLT+AFQ
Sbjct: 582 PSGFRVIPLDSGSA-LPTKLAP--TLDLASTLDT--AKFP---DDSSSAHCRSVLTMAFQ 633

Query: 638 FPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWI 697
           F FE++ ++ + + ARQYVR+V+ SVQ +AMA+    +SP  GPK     PEA  +A  I
Sbjct: 634 FVFEAHNREEIISSARQYVRNVMVSVQSIAMALASFRMSPQQGPK----QPEARIIAEQI 689

Query: 698 CQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
            + +    G EL        D      W   DAILCC+ K   +F
Sbjct: 690 VRGFRSSFGVEL-------SDGSTDAFWNEKDAILCCTWKAIPEF 727


>gi|90110444|gb|ABD90524.1| class III homeodomain-leucine zipper [Selaginella kraussiana]
          Length = 820

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/765 (52%), Positives = 499/765 (65%), Gaps = 95/765 (12%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LD+GKY+RYT EQVEALERVY ECPKPSS+RRQQ++R+ P+L+NIEP+QIKVWFQNRRCR
Sbjct: 11  LDSGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEPRQIKVWFQNRRCR 70

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT--------- 135
           EKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  +N  ++QQL+          
Sbjct: 71  EKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLSLDNQLLRQQLQQLRNNQDPDR 130

Query: 136 ---------APATTDASCDSVVT--TPQHSL-------RDANNPAGLLSIAEETLAEFLS 177
                    A A  D S DS VT   P H L       RD++ PAGLLSIAEETL  FL+
Sbjct: 131 KSSDRLNDQALALADRSPDSEVTGGVPHHHLTMAPQSPRDSS-PAGLLSIAEETLNSFLA 189

Query: 178 KATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWF 237
           KATGT VDW+Q+PGMKPGPDS+   AIS   +GVAARA GLV LEP ++AEILKDRPSW 
Sbjct: 190 KATGTLVDWIQIPGMKPGPDSISAAAISHGSAGVAARAVGLVDLEPIRVAEILKDRPSWL 249

Query: 238 RDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL 297
            DCR LEV   FP  N GT+EL+Y++ YAPTTLAPARDFWTLRYT  L++ SLVVCE+SL
Sbjct: 250 WDCRRLEVVGTFPTPNGGTLELIYSRMYAPTTLAPARDFWTLRYTIFLEDRSLVVCEKSL 309

Query: 298 SGS----GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRP 353
           +G+      GP+      F RAEMLPSG LIRP +GG S IHIVDH +LE+W V EVLRP
Sbjct: 310 TGAHGKHKGGPD------FERAEMLPSGFLIRPYEGGVSSIHIVDHYDLESWRVLEVLRP 363

Query: 354 LYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGF 403
           LYESS  +AQR+TIA          E+SGE++   G+QPA LR FS R++RGFNDAVNGF
Sbjct: 364 LYESSVFLAQRVTIAALQHLKRISQESSGEILLRGGQQPAALRAFSHRIARGFNDAVNGF 423

Query: 404 NDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSL------AFLGGILCAKASMLLQNV 457
            +DGW  +  DG + V I +N+  S+++ + P N +        + GILCAK+SMLLQNV
Sbjct: 424 AEDGWVSLVADGIDTVSITINT--SVASKALPGNQVWPDRFSNNISGILCAKSSMLLQNV 481

Query: 458 PPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHE 517
           PPA L+RFLREHRSEW   N          A S +   +R + +  S+         E  
Sbjct: 482 PPATLIRFLREHRSEWVGCN---------SATSDSVSALRISGYGTSK-------GDEEP 525

Query: 518 ELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLL 577
           ELLEVI++EG+        V +D  LLQ+C+G  +N  G C++L+FAP+D    +D PLL
Sbjct: 526 ELLEVIKMEGYGSQS----VPKDTVLLQLCTGYTDNVSGTCAQLIFAPVDPAVTNDMPLL 581

Query: 578 PSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQ 637
           PSGFR+IPLDS +   P  L    TLDL S+L+   A  P   D SS  H RSVLT+AFQ
Sbjct: 582 PSGFRVIPLDSGSA-LPTKLAP--TLDLASTLDT--AKFP---DDSSSAHCRSVLTMAFQ 633

Query: 638 FPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWI 697
           F FE++ ++ + + ARQYVR+V+ SVQ +AMA+    +SP  GPK     PEA  +A  I
Sbjct: 634 FVFEAHNREEIISSARQYVRNVMVSVQSIAMALASFRMSPQQGPK----QPEARIIAEQI 689

Query: 698 CQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
            + +    G EL        D      W   DAILCC+ K   +F
Sbjct: 690 VRGFRSSFGVEL-------SDGSTDAFWNEKDAILCCTWKAIPEF 727


>gi|89514851|gb|ABD75300.1| class III homeodomain-leucine zipper protein C3HDZ1 [Selaginella
           kraussiana]
          Length = 820

 Score =  705 bits (1820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/765 (52%), Positives = 498/765 (65%), Gaps = 95/765 (12%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LD+GKY+RYT EQVEALERVY ECPKPSS+RRQQ++R+ P+L+NIEP+QIKVWFQNRRCR
Sbjct: 11  LDSGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEPRQIKVWFQNRRCR 70

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT--------- 135
           EKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  +N  ++QQL+          
Sbjct: 71  EKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLSLDNQLLRQQLQQLRNNQDPDR 130

Query: 136 ---------APATTDASCDSVVT--TPQHSL-------RDANNPAGLLSIAEETLAEFLS 177
                    A A  D S DS VT   P H L       RD++ PAGLLSIAEET   FL+
Sbjct: 131 KSSDRLNDQALALADRSPDSEVTGGVPHHHLTMAPQSPRDSS-PAGLLSIAEETPNSFLA 189

Query: 178 KATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWF 237
           KATGT VDW+Q+PGMKPGPDS+   AIS   +GVAARA GLV LEP ++AEILKDRPSW 
Sbjct: 190 KATGTLVDWIQIPGMKPGPDSISAAAISHGSAGVAARAVGLVDLEPIRVAEILKDRPSWL 249

Query: 238 RDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL 297
            DCR LEV   FP  + GT+EL+Y+Q YAPTTLAPARDFWTLRYT  L++ SLVVCE+SL
Sbjct: 250 WDCRRLEVVGTFPTPSGGTLELIYSQMYAPTTLAPARDFWTLRYTIFLEDRSLVVCEKSL 309

Query: 298 SGS----GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRP 353
           +G+      GP+      F RAEMLPSG LIRP +GG S IHIVDH +LE+W V EVLRP
Sbjct: 310 TGAHGKHKGGPD------FERAEMLPSGFLIRPYEGGVSSIHIVDHYDLESWRVLEVLRP 363

Query: 354 LYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGF 403
           LYESS  +AQR+TIA          E+SGE++   G+QPA LR FS R++RGFNDAVNGF
Sbjct: 364 LYESSVFLAQRVTIAALQHLKRISQESSGEILLRGGQQPAALRAFSHRIARGFNDAVNGF 423

Query: 404 NDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSL------AFLGGILCAKASMLLQNV 457
            +DGW  +  DG + V I +N+  S+++ + P N +        + GILCAK+SMLLQNV
Sbjct: 424 AEDGWVSLVADGIDTVSITINT--SVASKALPGNQVWPDRFSNNISGILCAKSSMLLQNV 481

Query: 458 PPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHE 517
           PPA L+RFLREHRSEW   N          A S +   +R + +  S+         E  
Sbjct: 482 PPATLIRFLREHRSEWVGCN---------SATSDSVSALRISGYGTSK-------GDEEP 525

Query: 518 ELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLL 577
           ELLEVI++EG+        V +D  LLQ+C+G  +N  G C++L+FAP+D    +D PLL
Sbjct: 526 ELLEVIKMEGYGSQS----VPKDTVLLQLCTGYTDNVSGTCAQLIFAPVDPAVTNDMPLL 581

Query: 578 PSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQ 637
           PSGFR+IPLDS +   P  L    TLDL S+L+   A  P   D SS  H RSVLT+AFQ
Sbjct: 582 PSGFRVIPLDSGSA-LPTKLAP--TLDLASTLDT--AKFP---DDSSLAHCRSVLTMAFQ 633

Query: 638 FPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWI 697
           F FE++ ++ + + ARQYVR+V+ SVQ +AMA+    +SP  GPK     PEA  +A  I
Sbjct: 634 FVFEAHNREEIISSARQYVRNVMVSVQSIAMALASFRMSPQQGPK----QPEARIIAEQI 689

Query: 698 CQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
            + +    G EL        D      W   DAILCC+ K   +F
Sbjct: 690 VRGFRSSFGVEL-------SDGSTDAFWNEKDAILCCTWKAIPEF 727


>gi|89514859|gb|ABD75304.1| class III homeodomain-leucine zipper protein C3HDZ3 [Psilotum
           nudum]
          Length = 856

 Score =  696 bits (1795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/755 (50%), Positives = 490/755 (64%), Gaps = 48/755 (6%)

Query: 26  DNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCRE 85
           D GKYVRYT EQV+ LER+Y+ECP PSS RR QL+++CPILSNIEPKQIKVWFQNRRCR+
Sbjct: 13  DPGKYVRYTHEQVQLLERLYNECPNPSSFRRLQLLKDCPILSNIEPKQIKVWFQNRRCRD 72

Query: 86  KQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV---------------------C 124
           KQRKE+SRL ++N KL+AMN++L+EEN +L KQ  QLV                     C
Sbjct: 73  KQRKESSRLVSLNEKLSAMNQVLVEENGQLSKQAIQLVLQNKQLRQQLQQLKSCSAGSEC 132

Query: 125 ENGYM-KQQLRTAPATTDASCDSVVTTPQHSLRDANNPAG------LLSIAEETLAEFLS 177
           + G + K Q + A A T+ S DSVVT+    L    +PA       L++IAE+TL EFL+
Sbjct: 133 KRGSLDKLQEKLAAAATETSSDSVVTSGLRHLSPTFHPAHDAGPTRLMAIAEDTLTEFLA 192

Query: 178 KATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWF 237
           KATGTAVDW+QMPGMKPGPDS+GI AIS  C G+AARACGLV LEP KIA++LKDR SW 
Sbjct: 193 KATGTAVDWIQMPGMKPGPDSIGIVAISHGCDGIAARACGLVGLEPFKIAKLLKDRTSWL 252

Query: 238 RDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL 297
           RDCR ++V   F     G +ELLY Q Y PTTLA  RDF TLRYT+ L+  ++VVCER+ 
Sbjct: 253 RDCRRMDVLAEFNTDAGGLLELLYIQMYTPTTLALPRDFCTLRYTSFLEGRNVVVCERTF 312

Query: 298 SGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYES 357
                 P  A    FVRAEM  SG LIR     GSI+HIVDHL+L+  SVPEVLRPLY+S
Sbjct: 313 PVVNGVPTVAPVEHFVRAEMKSSGFLIRSYGSVGSIVHIVDHLDLQPGSVPEVLRPLYDS 372

Query: 358 SKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDG 407
             V+AQ MT+           E   ++  G G Q  V+RT  QR++R FN+AVN   DDG
Sbjct: 373 PSVLAQNMTVGALRYLQSLGQEAEADLALGQGLQLPVIRTLCQRMARSFNEAVNSLPDDG 432

Query: 408 WSLMTCDGAEDVIIAVNSTKSLSTA----SNPTNSLAFLGGILCAKASMLLQNVPPALLV 463
           WS +  DG +DV I VN++ S   +    S     L+  GG+LCAK SMLLQNVPPALL+
Sbjct: 433 WSSLASDGMDDVSIVVNASVSSGFSGQQLSLSDKLLSINGGVLCAKTSMLLQNVPPALLI 492

Query: 464 RFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVI 523
           RFLREHRSEWAD  VDA   A++ +  Y   G      + + + + L H++E E  LE++
Sbjct: 493 RFLREHRSEWADSEVDAEGTATIGSTIYDVSGFGRLGVSYAPVPLLLAHSLEQEL-LELL 551

Query: 524 RLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRI 583
           ++E  +  Q+ A + +D  L+Q+C+G+DE+ VGA ++LVFAP++    +D PLLPSGFR+
Sbjct: 552 QMECSAFVQDGAVLPKDQFLMQLCTGLDESPVGASAQLVFAPVNVSISEDMPLLPSGFRV 611

Query: 584 IPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSS-SCHHTRSVLTIAFQFPFES 642
           +PLD+   +  D   A RTLDL S+LE G       GDS  S   +RS+LTIAFQFP E 
Sbjct: 612 VPLDN---NLLDGYGASRTLDLASALEGGSGVVTPVGDSGISTFPSRSILTIAFQFPCEV 668

Query: 643 NLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYS 702
           +  + VA+ AR+Y+R++++SV RVAMA+ P+ LS   G +  PG+PE L L   I Q+Y 
Sbjct: 669 HSYEIVASFARKYLRTIVASVLRVAMALVPN-LSSKFGQRQLPGTPELLMLVQRILQAYR 727

Query: 703 YHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
              G +L+R  +   +   K LW H DAI C   K
Sbjct: 728 EWFGVDLMRGHTATINGSFKLLWHHPDAIFCYVWK 762


>gi|110349532|gb|ABG73241.1| class III HD-Zip protein HDZ32 [Ceratopteris richardii]
          Length = 803

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/705 (49%), Positives = 470/705 (66%), Gaps = 47/705 (6%)

Query: 77  WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA 136
           WFQNRRCREKQRKE SRLQTVN KLTAMNKLLMEENDRLQKQV+QL+ ENGY +QQL+  
Sbjct: 1   WFQNRRCREKQRKETSRLQTVNSKLTAMNKLLMEENDRLQKQVAQLMYENGYFRQQLQHG 60

Query: 137 PATTDASCDSVVTT-------PQHS---LRDANNPAGLLSIAEETLAEFLSKATGTAVDW 186
             TTD SCDSVVT+       PQ     L+D +  AG++S+AEE L++FLSKATGT+V+W
Sbjct: 61  GVTTDTSCDSVVTSGLQHLPAPQQQQSPLQDGSY-AGVISLAEEALSDFLSKATGTSVNW 119

Query: 187 VQMPGMKPGPDSVGIFAIS-QSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEV 245
           +QMPGMKPGPD + +  I     +G+ ARACGL++LEP+KI E+ KD+P+W R+CR +  
Sbjct: 120 IQMPGMKPGPDFMSMVNIMPHGATGIGARACGLINLEPSKIVEVFKDKPTWLRECRRMTT 179

Query: 246 FTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPN 305
                    GTIE+LY+Q YAPTTLAPA+DF TLRYTT  D+GS VVCERSL+G+   P 
Sbjct: 180 MFSTSTTGGGTIEVLYSQMYAPTTLAPAKDFCTLRYTTVSDDGSYVVCERSLNGAQTVPT 239

Query: 306 PASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM 365
               + FVRA+M   GCLIRPC+  GSI+ +VDH++LE+WS+PEVLRPLYESS ++A ++
Sbjct: 240 APQISAFVRADMFTGGCLIRPCETSGSIVVVVDHMDLESWSIPEVLRPLYESSTILAHKV 299

Query: 366 T---------IAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGA 416
           T         IA+ +     G G+QPA +R+ S R+++ FNDAVNGF DDGW  +T DG 
Sbjct: 300 TIAALKHLRHIAQENALDSPGAGQQPAAVRSLSYRIAKAFNDAVNGFPDDGWVPLTGDGV 359

Query: 417 EDVIIAVNSTKSLSTASNPT--NSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWA 474
           +DV + +    +     + +   S +    +LCAKASMLLQ+VPPALLV+F+REHRSEWA
Sbjct: 360 DDVTVMMKGPVNAGPVDHLSLHQSSSINSSVLCAKASMLLQHVPPALLVQFMREHRSEWA 419

Query: 475 DFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH---SLA 531
               D     +++  +  + G      + SQ++ P  H+IE +E LE+I++EG    S+ 
Sbjct: 420 ----DPVCEEAMRMSNPGFSGFHAAT-SNSQLLQPQVHSIEEDEFLELIKMEGQNSVSIQ 474

Query: 532 QEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTP 591
            +    S+D+ LLQ+CSG+++ + GAC+++VFAPID    DD  L+PSGFR+IPLD +  
Sbjct: 475 DQSLMNSQDMFLLQLCSGLEDKSSGACAQMVFAPIDASVSDDIALIPSGFRVIPLDIEPH 534

Query: 592 DTPDTLTAHRTLDLTSSLEVGPATNPAAGDS------SSCHHTRSVLTIAFQFP-FESNL 644
           D  +  ++ RTLDL S LEV   T+    D        +    RSVLTIAFQF   E+ +
Sbjct: 535 DQVNAASSGRTLDLASFLEVSNTTSSGGQDELHSRGRGAGGSLRSVLTIAFQFSCIEARM 594

Query: 645 QDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPK----LSPGSPEAL----TLAHW 696
            D+VA +ARQYVRSV+S++QRVA+A   + LS    P+        +P  +    +LA  
Sbjct: 595 HDSVACIARQYVRSVVSTIQRVAVAFISNPLSLLKFPQPLRAYDSKNPITIQVQSSLARC 654

Query: 697 ICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK-VPL 740
           ICQSY  ++GA+L++ +    ++ L+ L +  DA+LCCS K VP+
Sbjct: 655 ICQSYKLYMGADLVQVEDGSSEAYLQALNKMEDALLCCSCKPVPV 699


>gi|224029377|gb|ACN33764.1| unknown [Zea mays]
          Length = 584

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/489 (66%), Positives = 390/489 (79%), Gaps = 18/489 (3%)

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGC 322
           Q YAPTTLA  RDFWTLRYT+ L++GSLV+CERSL+ S  GP+  +   FVRAE+LPSG 
Sbjct: 2   QTYAPTTLAAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFVRAEVLPSGY 61

Query: 323 LIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSG 372
           LIRPC+GGGS+IHIVDH++L+AWSVPEVLRPLYES K++AQ+ TIA          E+SG
Sbjct: 62  LIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKTTIAALRHIRQIAHESSG 121

Query: 373 EVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTA 432
           E+ YG GRQPAVLRTFSQRLSRGFNDAVNGF DDGWSLM+ DGAEDV IA+NS+ +    
Sbjct: 122 EMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAEDVTIAINSSPNKLIG 181

Query: 433 SNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAG 489
            +  +S  F    GGILCAKASMLLQNVPPALLVRFLREHRSEWAD  VDAYSAA+L+A 
Sbjct: 182 PHVNSSQLFTAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAAALRAS 241

Query: 490 SYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSG 549
            YA PG+R + F GSQ+I+PL HT+EHEE LEVIRLEGHSL  ++  +SRD++LLQ+CSG
Sbjct: 242 PYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQLCSG 301

Query: 550 VDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSL 609
           VDENA GAC++LVFAPIDE F DD PLLPSGFR+IPLD+KT    D  +  RTLDL S+L
Sbjct: 302 VDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKT----DPPSGTRTLDLASTL 357

Query: 610 EVGP-ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAM 668
           EVG   T  A+ D+SS  +TRSVLTIAFQF +E++L+++VA MARQYVR+V++SVQRVAM
Sbjct: 358 EVGSGGTTRASSDASSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAM 417

Query: 669 AICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHS 728
           AI PS +   L  K +PGSPEA TLA WI +SY +H GAELLR+D+   D+ LK LWQHS
Sbjct: 418 AIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHS 477

Query: 729 DAILCCSLK 737
           D+I+CCSLK
Sbjct: 478 DSIMCCSLK 486


>gi|302757763|ref|XP_002962305.1| hypothetical protein SELMODRAFT_77000 [Selaginella moellendorffii]
 gi|300170964|gb|EFJ37565.1| hypothetical protein SELMODRAFT_77000 [Selaginella moellendorffii]
          Length = 821

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/753 (47%), Positives = 479/753 (63%), Gaps = 68/753 (9%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           KY RYT EQ+E LE VY+ECPKPSSLRRQQL++E PIL+NI PKQ+KVWFQNRRCREKQR
Sbjct: 6   KYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQR 65

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-------------- 134
           KE SRL  +N KLTA+NK+L+E ND L KQ +QL  +   +++ L               
Sbjct: 66  KETSRLHGLNSKLTALNKILVENNDHLAKQSTQLTLQKHTLRKHLYGDCSSQRPPMEASQ 125

Query: 135 -----TAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
                 A  +++ +  S +   QH   D + P GL ++AE++LA+FL+KATGTAVDW+Q+
Sbjct: 126 VCRGALAAGSSEIAGTSELPNIQHLSLD-HGPVGLSALAEQSLADFLAKATGTAVDWIQL 184

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPT-----KIAEILKDRPSWFRDCRSLE 244
            GMKPGPDS GI AIS  C G+AARA GLV+LE T     +I E+LKD+ SW  DCR  +
Sbjct: 185 LGMKPGPDSFGIVAISHGCDGIAARALGLVALEATRVSEWRIVEVLKDKTSWLWDCRRSD 244

Query: 245 VFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGP 304
           V  +  + N  T+E+++TQ YAPTTLAP RDF TLR TT+L++G+LVVCERS+S +    
Sbjct: 245 VIHICSSENGSTMEIMHTQLYAPTTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAECLS 304

Query: 305 NPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL-RPLYESSKVVAQ 363
              S   FVRAEML SG L+RPC+GG  I+HI+DHL+L+  SV EVL RPLY SS ++AQ
Sbjct: 305 YVPSTQYFVRAEMLTSGYLVRPCEGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSSSLLAQ 364

Query: 364 RMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTC 413
           RMT+           E  GE+V G G+QP+VLR+ S+R++RGFNDAVNGF DDGW  M  
Sbjct: 365 RMTVKALRFLKHLAQEEIGEIVVGGGQQPSVLRSLSRRMARGFNDAVNGFPDDGWCTMGG 424

Query: 414 DGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEW 473
           DG ++V ++ N+T + S +   ++ L+ L G+LCAKASMLLQNV P+ L+RFLR+HRSEW
Sbjct: 425 DGLDNVAVSCNATINFSLSKFQSDRLSSLAGVLCAKASMLLQNVHPSYLIRFLRDHRSEW 484

Query: 474 ADFNVDAY--SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLA 531
              N+D +   AAS   G               Q  +PL HT + E+ LE + LEGH  A
Sbjct: 485 G-CNMDFFQQDAASRSHGK-------------RQAHVPLFHTAK-EDFLEAVILEGHYSA 529

Query: 532 QEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTP 591
           ++   +SR+I+LLQ+CSG+++  +  CS+L+FAP+D    DD PLL SGFR++PL     
Sbjct: 530 EDGTILSREIYLLQLCSGIEDEDIDGCSQLIFAPVDANLSDDMPLLSSGFRVLPLCDDMD 589

Query: 592 DTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
           D        R  D +  L  G   N            RS+LTIAFQF +E   +D VA M
Sbjct: 590 D-----IVKRQSD-SEELRSGKRKNHK--------FARSILTIAFQFMYEVGTRDTVAEM 635

Query: 652 ARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLR 711
           AR Y+R+V+  VQR+ +++  S L  +        S  A +L H I QSYS   G +++ 
Sbjct: 636 ARNYIRNVMDFVQRITLSLAASSLGSSSADAPFVSSKGA-SLIHQILQSYSVSHGVDIIP 694

Query: 712 SDSVGGDSVLKNLWQHSDAILCCSLKVPLQFHQ 744
            +    D+++   W ++ AI+CCSLK    F+Q
Sbjct: 695 RNFTDKDAIVMLFWHYAAAIICCSLKASCPFYQ 727


>gi|109729930|tpg|DAA05779.1| TPA_inf: class III HD-Zip protein HDZ33 [Selaginella
           moellendorffii]
          Length = 812

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/751 (47%), Positives = 478/751 (63%), Gaps = 68/751 (9%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           KY RYT EQ+E LE VY+ECPKPSSLRRQQL++E PIL+NI PKQ+KVWFQNRRCREKQR
Sbjct: 6   KYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQR 65

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-------------- 134
           KE SRL  +N KLTA+NK+L+E ND L KQ +QL  +   +++ L               
Sbjct: 66  KETSRLHGLNSKLTALNKILVENNDHLAKQSTQLTLQKHTLRKHLYGDCSSQRPPMEASQ 125

Query: 135 -----TAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
                 A  +++ +  S +   QH   D + P GL ++AE++LA+FL+KATGTAVDW+Q+
Sbjct: 126 VCRGALAAGSSEIAGTSELPNIQHLSLD-HGPVGLSALAEQSLADFLAKATGTAVDWIQL 184

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPT-----KIAEILKDRPSWFRDCRSLE 244
            GMKPGPDS GI AIS  C G+AARA GLV+LE T     +I E+LKD+ SW  DCR  +
Sbjct: 185 LGMKPGPDSFGIVAISHGCDGIAARALGLVALEATRVSEWRIVEVLKDKTSWLWDCRRSD 244

Query: 245 VFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGP 304
           V  +  + N  T+E+++TQ YAPTTLAP RDF TLR TT+L++G+LVVCERS+S +    
Sbjct: 245 VIHICSSENGSTMEIMHTQLYAPTTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAECLS 304

Query: 305 NPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL-RPLYESSKVVAQ 363
              S   FVRAEML SG L+RPC+GG  I+HI+DHL+L+  SV EVL RPLY SS ++AQ
Sbjct: 305 YVPSTQYFVRAEMLTSGYLVRPCEGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSSSLLAQ 364

Query: 364 RMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTC 413
           RMT+           E  GE+V G G+QP+VLR+ S+R++RGFNDAVNGF DDGW  M  
Sbjct: 365 RMTVKALRFLKHLAQEEIGEIVVGGGQQPSVLRSLSRRMARGFNDAVNGFPDDGWCTMGG 424

Query: 414 DGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEW 473
           DG ++V ++ N+T + S +   ++ L+ L G+LCAKASMLLQNV P+ L+RFLR+HRSEW
Sbjct: 425 DGLDNVAVSCNATINFSLSKFQSDRLSSLAGVLCAKASMLLQNVHPSYLIRFLRDHRSEW 484

Query: 474 ADFNVDAY--SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLA 531
              N+D +   AAS   G               Q  +PL HT + E+ LE + LEGH  A
Sbjct: 485 G-CNMDFFQQDAASRSHGK-------------RQAHVPLFHTAK-EDFLEAVILEGHYSA 529

Query: 532 QEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTP 591
           ++   +SR+I+LLQ+CSG+++  +  CS+L+FAP+D    DD PLL SGFR++PL     
Sbjct: 530 EDGTILSREIYLLQLCSGIEDEDIDGCSQLIFAPVDANLSDDMPLLSSGFRVLPLCDDMD 589

Query: 592 DTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
           D        R  D +  L  G   N            RS+LTIAFQF +E   +D VA M
Sbjct: 590 D-----IVKRQSD-SEELRSGKRKNHK--------FARSILTIAFQFMYEVGTRDTVAEM 635

Query: 652 ARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLR 711
           AR Y+R+V+  VQR+ +++  S L  +        S  A +L H I QSYS   G +++ 
Sbjct: 636 ARNYIRNVMDFVQRITLSLAASSLGSSSADAPFVSSKGA-SLIHQILQSYSVSHGVDIIP 694

Query: 712 SDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
            +    D+++   W ++ AI+CCSLK   +F
Sbjct: 695 RNFTDKDAIVMLFWHYAAAIICCSLKATPEF 725


>gi|302763605|ref|XP_002965224.1| hypothetical protein SELMODRAFT_167294 [Selaginella moellendorffii]
 gi|300167457|gb|EFJ34062.1| hypothetical protein SELMODRAFT_167294 [Selaginella moellendorffii]
          Length = 778

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/728 (48%), Positives = 471/728 (64%), Gaps = 56/728 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           KY RYT EQ+E LE VY+ECPKPSSLRRQQL++E PIL+NI PKQ+KVWFQNRRCREKQR
Sbjct: 6   KYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQR 65

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
           KE SRL  +N KLTA+NK+L+E ND L KQ +QL  +   +++ L          C S  
Sbjct: 66  KETSRLHGLNSKLTALNKILVENNDHLAKQSTQLTLQKHTLRKHLY-------GDCSS-- 116

Query: 149 TTPQHSLRDANNPAGLLS-IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQS 207
              Q    +A+     LS +AE++LA+FL+KATGTAVDW+Q+ GMKPGPDS GI AIS  
Sbjct: 117 ---QRPPMEASQVCCKLSALAEQSLADFLAKATGTAVDWIQLLGMKPGPDSFGIVAISHG 173

Query: 208 CSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAP 267
           C G+AARA GLV+LE T+I E+LKD+ SW  DCR  +V  +  + N  T+E+++TQ YAP
Sbjct: 174 CDGIAARALGLVALEATRIVEVLKDKTSWLWDCRRSDVIHICSSENGSTMEIMHTQLYAP 233

Query: 268 TTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPC 327
           TTLAP RDF TLR TT+L++G+LVVCERS+S +       S   FVRAEML SG L+RPC
Sbjct: 234 TTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAECLSYVPSTQYFVRAEMLTSGYLVRPC 293

Query: 328 DGGGSIIHIVDHLNLEAWSVPEVL-RPLYESSKVVAQRMTIA----------ETSGEVVY 376
           +GG  I+HI+DHL+L+  SV EVL RPLY SS ++AQRMT+           E  GE+V 
Sbjct: 294 EGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSSSLLAQRMTVKALRFLKHLAQEEIGEIVV 353

Query: 377 GLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPT 436
           G G+QP+VLR+ S+R++RGFNDAVNGF DDGW  M  DG ++V ++ N+T + S +   +
Sbjct: 354 GGGQQPSVLRSLSRRMARGFNDAVNGFPDDGWCTMGGDGLDNVAVSCNATINFSLSKFQS 413

Query: 437 NSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY--SAASLKAGSYAYP 494
           + L+ L G+LCAKASMLLQNV P+ L+RFLR+HRSEW   N+D +   AAS   G     
Sbjct: 414 DRLSSLAGVLCAKASMLLQNVHPSYLIRFLRDHRSEWG-CNMDFFQQDAASRSHGK---- 468

Query: 495 GMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENA 554
                     Q  +PL HT + E+ LE + LEGH  A++   +SR+I+LLQ+CSG+++  
Sbjct: 469 ---------RQAHVPLFHTAK-EDFLEAVILEGHYSAEDGTILSREIYLLQLCSGIEDED 518

Query: 555 VGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPA 614
           +  CS+L+FAP+D    DD PLL SGFR++PL     D        R  D +  L  G  
Sbjct: 519 IDGCSQLIFAPVDANLSDDMPLLSSGFRVLPLCDDMDD-----IVKRQSD-SEELRSGKR 572

Query: 615 TNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSG 674
            N            RS+LTIAFQF +E   +D VA MAR Y+R+V+  VQR+ +++  S 
Sbjct: 573 KNHK--------FARSILTIAFQFMYEVGTRDTVAEMARNYIRNVMDFVQRITLSLAASS 624

Query: 675 LSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCC 734
           L  +        S  A +L H I QSYS   G +++  +    D+++   W ++ AI+CC
Sbjct: 625 LGSSSADAPFVSSKGA-SLIHQILQSYSVSHGVDIIPRNFTDKDAIVMLFWHYAAAIICC 683

Query: 735 SLKVPLQF 742
           SLK   +F
Sbjct: 684 SLKATPEF 691


>gi|238908808|gb|ACF86690.2| unknown [Zea mays]
          Length = 558

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 307/465 (66%), Positives = 370/465 (79%), Gaps = 17/465 (3%)

Query: 285 LDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEA 344
           +++GSLVVCERSL+GSG GPN ASA QFVRAEMLPSG L+RPC+GGGSI+HIVDHL+LEA
Sbjct: 1   MEDGSLVVCERSLTGSGGGPNAASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEA 60

Query: 345 WSVPEVLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSR 394
           WSVPEVLRPLYESS+VVAQ+MT            ETSGEVVY LGRQPAVLRTFSQRLSR
Sbjct: 61  WSVPEVLRPLYESSRVVAQKMTTVALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSR 120

Query: 395 GFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLL 454
           GFNDA++GFNDDGWS+M  DG EDV++A NSTK +   SN   +    GGI+CAKASMLL
Sbjct: 121 GFNDAISGFNDDGWSVMGGDGIEDVVVACNSTKKIRNNSNAGITFGAPGGIICAKASMLL 180

Query: 455 QNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTI 514
           Q+VPPA+LVRFLREHRSEWAD+N+DAY A+SLK  + + PG+RP RF+G Q+IMPL HT+
Sbjct: 181 QSVPPAVLVRFLREHRSEWADYNIDAYLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTV 240

Query: 515 EHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDG 574
           E+EE+LEV+RLEG  L  ++A +SRDIHLLQ+C+G+DE +VG+  +LVFAPIDE FPDD 
Sbjct: 241 ENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDA 300

Query: 575 PLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDS--SSCHHTRSVL 632
           PL+ SGFR+IPLD KT    D +++ RTLDL SSL+VG A   A+GD+    C + RSVL
Sbjct: 301 PLISSGFRVIPLDMKT----DGVSSGRTLDLASSLDVGSAAPQASGDAPPDDC-NLRSVL 355

Query: 633 TIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALT 692
           TIAFQFP+E +LQD+VATMARQYVRSV+S+VQRV+MAI PS      G ++  G PEA T
Sbjct: 356 TIAFQFPYEMHLQDSVATMARQYVRSVVSAVQRVSMAISPSQSGLNAGQRMLSGFPEAAT 415

Query: 693 LAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           LA W+CQSY YHLG ELL      G+++LK LW H DA+LCCS K
Sbjct: 416 LARWVCQSYHYHLGVELLNQSDEAGEALLKMLWHHPDAVLCCSFK 460


>gi|110349550|gb|ABG73250.1| class III HD-Zip protein HDZ31 [Ginkgo biloba]
          Length = 394

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 307/395 (77%), Positives = 329/395 (83%), Gaps = 23/395 (5%)

Query: 77  WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA 136
           WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGYM+QQL+ A
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNA 60

Query: 137 P-ATTDASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWV 187
             ATTD SC+SVVT        TPQH  RDA+ PAGLLSIAEETLAEFLSKATGTAVDWV
Sbjct: 61  SVATTDTSCESVVTSGQHQHNPTPQHPPRDAS-PAGLLSIAEETLAEFLSKATGTAVDWV 119

Query: 188 QMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFT 247
           QMPGMKPGPDS+GI AIS SCSGVAARACGLV LEPTKIAEILKDRPSW RDCR L+V T
Sbjct: 120 QMPGMKPGPDSIGIVAISHSCSGVAARACGLVGLEPTKIAEILKDRPSWLRDCRCLDVLT 179

Query: 248 MFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA 307
            FP GN GTIELLY Q YAPTTLA ARDFWTLRYTT L++GSLVVCERSLSG+  GP+ A
Sbjct: 180 PFPTGNGGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLSGAQGGPSIA 239

Query: 308 SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI 367
            A  FVRAEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+MTI
Sbjct: 240 PAQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTI 299

Query: 368 A----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAE 417
           A          E +GEVV+G GRQPAVLRTFSQRLSRGFN+AVNGF DDGWSLM  DG E
Sbjct: 300 AALRRIRQIAQEVTGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGNDGME 359

Query: 418 DVIIAVNS--TKSLSTASNPTNSL-AFLGGILCAK 449
           DV IA+NS  +K L +  N +N L A  GGILCAK
Sbjct: 360 DVTIAINSSPSKLLGSQVNSSNGLTAVGGGILCAK 394


>gi|449506784|ref|XP_004162848.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ATHB-14-like [Cucumis sativus]
          Length = 566

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 305/462 (66%), Positives = 357/462 (77%), Gaps = 18/462 (3%)

Query: 290 LVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPE 349
           L VCERSLS S  GP     + FVRAEMLPSG LIR C+G GSIIHIVDH++L+ WSVPE
Sbjct: 9   LQVCERSLSSSSGGPAGPPPSTFVRAEMLPSGYLIRACEGXGSIIHIVDHIDLDVWSVPE 68

Query: 350 VLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDA 399
           VLRPLYESSK++AQ++TIA          ET+GE+    GRQPAVLRTFSQ+L RGFNDA
Sbjct: 69  VLRPLYESSKILAQKITIAALRHIRQIAQETNGEIQCTGGRQPAVLRTFSQKLCRGFNDA 128

Query: 400 VNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNV 457
           VNGF DDGWS M  DG EDV I +N++ +  + S    SL  +F GG++CAKASMLLQNV
Sbjct: 129 VNGFADDGWSPMGSDGVEDVTILINTSANKFSGSQYNTSLYPSFGGGVMCAKASMLLQNV 188

Query: 458 PPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHE 517
           PPALLVRFLREHRSEWAD+ VDAYSAASLKA  YA P  RP  F  SQ+I+PL  T+EHE
Sbjct: 189 PPALLVRFLREHRSEWADYGVDAYSAASLKASPYAVPCARPGGFPSSQVILPLATTVEHE 248

Query: 518 ELLEVIRLEGHSLAQED-AFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPL 576
           E LEV+RLEG + + ED A   RD++LLQ+CSGVDENAVGAC++LVFAPIDE F DD PL
Sbjct: 249 EFLEVVRLEGLAFSPEDVALAGRDMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAPL 308

Query: 577 LPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSS-SCHHTRSVLTIA 635
           LPSGFR+IPLD KT    D  TA RTLDL S+LEVG     +AG++  S ++ RSVLTIA
Sbjct: 309 LPSGFRVIPLDPKT----DEPTAARTLDLASTLEVGANAARSAGETDLSNYNLRSVLTIA 364

Query: 636 FQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAH 695
           FQF FE++LQ+NVA MARQYVRSV+ SVQRVAMAI PS LS  +G K  PGSPEALTLA 
Sbjct: 365 FQFTFENHLQENVAAMARQYVRSVVGSVQRVAMAISPSRLSSNMGLKPLPGSPEALTLAR 424

Query: 696 WICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           WIC+SY  H+GAELL++DS  GD++LK LW HSDAI+CCS+K
Sbjct: 425 WICRSYRVHVGAELLQADSQSGDAMLKQLWHHSDAIMCCSVK 466


>gi|110349556|gb|ABG73253.1| class III HD-Zip protein HDZ32 [Cycas revoluta]
          Length = 392

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 282/393 (71%), Positives = 315/393 (80%), Gaps = 21/393 (5%)

Query: 77  WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA 136
           WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +QQL+ A
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQLQNA 60

Query: 137 P-ATTDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
             ATTD SC+SVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+W+QM
Sbjct: 61  SIATTDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWIQM 119

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
           PGMKPGPDS+GI AIS  C+GVAARACGLV LEPTK+AEILKDRPSWFRDCR +++ T F
Sbjct: 120 PGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTKVAEILKDRPSWFRDCRCVDILTAF 179

Query: 250 PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA 309
             GN GT+ELLY Q YAPTTLA ARDFWTLRYT+ L++GSLVVCERSLSG+  GP+    
Sbjct: 180 STGNGGTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQGGPSMPPV 239

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA- 368
             FVRAEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQ+ T+A 
Sbjct: 240 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAA 299

Query: 369 ---------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                    E S +VV G GRQPA LRTF QRLS+GFN+AVNGF DDGWSLM  DG +DV
Sbjct: 300 LRHLRQIAQEISCDVVLGWGRQPAALRTFGQRLSKGFNEAVNGFTDDGWSLMGSDGMDDV 359

Query: 420 IIAVNSTKSLSTASNPTNS---LAFLGGILCAK 449
            + ++S+ S    S   +S    A  GGILCAK
Sbjct: 360 TVLISSSPSKLLGSQLASSDGLPALGGGILCAK 392


>gi|414871783|tpg|DAA50340.1| TPA: hypothetical protein ZEAMMB73_581465 [Zea mays]
          Length = 513

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 278/419 (66%), Positives = 333/419 (79%), Gaps = 18/419 (4%)

Query: 333 IIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQP 382
           +IHIVDH++L+AWSVPEVLRPLYES K++AQ+ TIA          E+SGE+ YG GRQP
Sbjct: 1   MIHIVDHVDLDAWSVPEVLRPLYESPKILAQKTTIAALRHIRQIAHESSGEMPYGGGRQP 60

Query: 383 AVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL 442
           AVLRTFSQRLSRGFNDAVNGF DDGWSLM+ DGAEDV IA+NS+ +     +  +S  F 
Sbjct: 61  AVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAEDVTIAINSSPNKLIGPHVNSSQLFT 120

Query: 443 ---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPT 499
              GGILCAKASMLLQNVPPALLVRFLREHRSEWAD  VDAYSAA+L+A  YA PG+R +
Sbjct: 121 AIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAAALRASPYAVPGLRAS 180

Query: 500 RFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACS 559
            F GSQ+I+PL HT+EHEE LEVIRLEGHSL  ++  +SRD++LLQ+CSGVDENA GAC+
Sbjct: 181 GFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQLCSGVDENAAGACA 240

Query: 560 ELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP-ATNPA 618
           +LVFAPIDE F DD PLLPSGFR+IPLD+KT    D  +  RTLDL S+LEVG   T  A
Sbjct: 241 QLVFAPIDESFADDAPLLPSGFRVIPLDAKT----DPPSGTRTLDLASTLEVGSGGTTRA 296

Query: 619 AGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPT 678
           + D+SS  +TRSVLTIAFQF +E++L+++VA MARQYVR+V++SVQRVAMAI PS +   
Sbjct: 297 SSDASSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQ 356

Query: 679 LGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           L  K +PGSPEA TLA WI +SY +H GAELLR+D+   D+ LK LWQHSD+I+CCSLK
Sbjct: 357 LEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLK 415


>gi|449502845|ref|XP_004161759.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like, partial
           [Cucumis sativus]
          Length = 544

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 254/455 (55%), Positives = 322/455 (70%), Gaps = 22/455 (4%)

Query: 303 GPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA 362
           GP+      FVRAEMLPSG LIRPC+GGGSIIHIVDH++L+ WSVPEVLRPLY+SS ++A
Sbjct: 4   GPSMPPVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLDPWSVPEVLRPLYKSSTLLA 63

Query: 363 QRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMT 412
           Q+ T+A          E S   V G GR+PA LR  SQ+LSRGFN+AVNGF D+GWSL+ 
Sbjct: 64  QKNTMAALRLLRQISQEVSQPNVTGWGRRPAALRALSQKLSRGFNEAVNGFTDEGWSLLE 123

Query: 413 CDGAEDVIIAVNSTKSLST-ASNPTNSLAF---LGGILCAKASMLLQNVPPALLVRFLRE 468
            DG +DV + VN +   +   +N + S  F      +LCAKASMLLQNV PA+L+RFLRE
Sbjct: 124 NDGVDDVTLLVNMSHGKTMMGANISYSNGFPSMSNAVLCAKASMLLQNVTPAMLIRFLRE 183

Query: 469 HRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH 528
           HRSEWAD ++DAYSAA++K G    PG     F G Q+I+PL  T+EHEE +EV++ E  
Sbjct: 184 HRSEWADSSIDAYSAAAIKTGQCGLPGSHAGTF-GGQVILPLAQTVEHEEFMEVVKFENV 242

Query: 529 SLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS 588
              ++D  +  DI LLQ+C+GVDEN VG  +EL+FAPID  F DD P+LPSGFRIIPLDS
Sbjct: 243 GHYRDDMLMPGDIFLLQLCNGVDENTVGTSAELIFAPIDASFSDDAPILPSGFRIIPLDS 302

Query: 589 KTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGD-SSSCHHTRSVLTIAFQFPFESNLQDN 647
                 D  + +RTLDL S+L+VGPA N A+GD +     ++SV+TIAFQF F+ +LQDN
Sbjct: 303 GM----DASSPNRTLDLASALDVGPAGNRASGDCAGQSGKSKSVMTIAFQFVFDVHLQDN 358

Query: 648 VATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGA 707
           VA MARQYVRS+I+SVQRVA+A+ PS   P    +   G+PEA TLA WI QSY  ++G 
Sbjct: 359 VAAMARQYVRSIIASVQRVALALSPSNFGPHANLQTPAGAPEAQTLARWITQSYRCYMGM 418

Query: 708 ELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
           ELL+++  G +SVLK+LW HSDA++CCSLK    F
Sbjct: 419 ELLKNE--GRESVLKSLWHHSDAVMCCSLKALPNF 451


>gi|326493562|dbj|BAJ85242.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 460

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 242/374 (64%), Positives = 291/374 (77%), Gaps = 8/374 (2%)

Query: 364 RMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
           R    ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDVIIA 
Sbjct: 3   RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMAGDGIEDVIIAC 62

Query: 424 NSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSA 483
           NS K  S  + P N+    GG++CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N DAYSA
Sbjct: 63  NSKKIRSNNTAP-NAFIAPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSA 121

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
           ++LK+ S + PG+RP RF+GSQIIMPL HT+E+EE+LEV+RLEG +L  ++  +SRDIHL
Sbjct: 122 SALKSSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQAL--DEGLLSRDIHL 179

Query: 544 LQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTL 603
           LQ C+G+DE ++G+C +LVFAPIDE+FPDD PL+ SGFR+IPLD KT   P      RTL
Sbjct: 180 LQFCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGAP----TGRTL 235

Query: 604 DLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSV 663
           DL SSLE G  T  A+G++  C + RSVLTIAFQFP+E +LQD+VATMARQYVRS++S+V
Sbjct: 236 DLASSLEAGSTTLQASGNADDC-NLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSAV 294

Query: 664 QRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKN 723
           QRV+MAI PS        K+  G PEA TLA WICQSY +HLG EL R     G+S+L+ 
Sbjct: 295 QRVSMAISPSRSGLNAEQKIISGFPEAATLARWICQSYRFHLGVELFRQADEAGESLLRM 354

Query: 724 LWQHSDAILCCSLK 737
           LW H DAILCCS K
Sbjct: 355 LWDHEDAILCCSFK 368


>gi|46408857|emb|CAD89206.1| HD-ZIP protein [Oryza sativa Japonica Group]
          Length = 451

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 236/371 (63%), Positives = 291/371 (78%), Gaps = 8/371 (2%)

Query: 369 ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKS 428
           ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV+IA NSTK 
Sbjct: 4   ETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDGVEDVVIACNSTKK 63

Query: 429 LSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKA 488
           + + SN   +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A++LK 
Sbjct: 64  IRSNSNAGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLASTLKT 123

Query: 489 GSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICS 548
            + +  G+RP RF+GSQII+PL HT+E+EE+LEV+RLEG  L  ++A +SRDIHLLQ+C+
Sbjct: 124 SACSLTGLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCT 183

Query: 549 GVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSS 608
           G+DE +VG+  +LVFAPID+ FPD+ PL+ SGFR+IPLD KT    D  ++ RTLDL SS
Sbjct: 184 GIDEKSVGSSFQLVFAPIDD-FPDETPLISSGFRVIPLDMKT----DGASSGRTLDLASS 238

Query: 609 LEVGPATNPAAGDSSS--CHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRV 666
           LEVG AT  A+GD+S+  C + RSVLTIAFQFP+E +LQD+VA MARQYVRS++S+VQRV
Sbjct: 239 LEVGSATAQASGDASADDC-NLRSVLTIAFQFPYELHLQDSVAAMARQYVRSIVSAVQRV 297

Query: 667 AMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQ 726
           +MAI P       G ++  G PEA TLA W+CQSY YHLG ELL       + +LK LW 
Sbjct: 298 SMAISPPQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGDAEQLLKMLWH 357

Query: 727 HSDAILCCSLK 737
           + DAILCCS K
Sbjct: 358 YQDAILCCSFK 368


>gi|89514839|gb|ABD75294.1| class III homeodomain-leucine zipper protein C3HDZ1 [Chara
           corallina]
          Length = 910

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 287/646 (44%), Positives = 390/646 (60%), Gaps = 64/646 (9%)

Query: 139 TTDASCDSVVTTPQHSLR---DANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPG 195
            TDAS + VV   Q S+     A++ + L+ +A + + EFL KATGTAVDW  MPG K G
Sbjct: 192 VTDASSEVVVNGVQPSVSVSSRADSQSALMQMASDMVGEFLGKATGTAVDWANMPGTKNG 251

Query: 196 PDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAG 255
           PD+  +  I +   G+A+R  GLV +EP K+A  LKDR  W R+CR  EV   F   + G
Sbjct: 252 PDTFEMVFILRGGPGIASRVYGLVLMEPAKVASALKDRSQWLRECRKSEVLGEFRT-DQG 310

Query: 256 TIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRA 315
           T+E++YTQ +APTTLAP RDF T RYTT + +GS+V+CERS+SG   G N      FVRA
Sbjct: 311 TVEIVYTQMFAPTTLAPPRDFCTFRYTTFMQDGSIVICERSMSG---GTNLEPVPAFVRA 367

Query: 316 EMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI-------- 367
           EM PSG  I+PC+ G SII+IVDH++L+  SVPEVLRPLYESS  +AQR T+        
Sbjct: 368 EMHPSGYYIKPCN-GNSIIYIVDHVDLKPLSVPEVLRPLYESSAALAQRQTMEALRYLRR 426

Query: 368 --AETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
             ++++ +     G Q    R  ++R++RGFN+AVNGF DDGW  +  DG +DV +A   
Sbjct: 427 LASDSNLDSPRANGHQALAWRGIAERIARGFNEAVNGFPDDGWVPLMGDGMDDVSVAARP 486

Query: 426 TKS-LSTASNPT---NSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNV 478
                 + SNP    NS A     GG+LCAKASMLLQNVPPALL++FLREHR+EW   ++
Sbjct: 487 LNGQRHSGSNPAMSGNSEALRASEGGVLCAKASMLLQNVPPALLIKFLREHRAEWVPADL 546

Query: 479 DAYSAASLKA--GSYAYPGMRPTRFTGSQIIMPL---------GHTIEH--EELLEVIRL 525
           +  SAA ++   GS+  PG       G +II P+         G  +    EE LEV++ 
Sbjct: 547 ELSSAAMMRGANGSFMAPGR-----NGEEIITPMPPVPLSGCYGTYLSDPSEEFLEVVKG 601

Query: 526 EGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEM-FPDDGPLLPSGFRII 584
              +  QE   +SR    LQ+CSG D NAV A ++LVFAP+D     DD  +LPSGFR+I
Sbjct: 602 GSQACGQESGIMSRQTLNLQLCSGTDTNAVAAVAQLVFAPVDAASSADDFSILPSGFRVI 661

Query: 585 PLDS--KTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSS---CHHTRSVLTIAFQFP 639
           P+D+       P +    RTLDL +SL+    +N  A D  S   C   RSVLT+ FQF 
Sbjct: 662 PIDAGLGVEGRPQS----RTLDLAASLDTRDHSNREAVDGMSPGVCW--RSVLTMTFQFS 715

Query: 640 FESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQ 699
           ++ + ++++AT+AR YVRSV++ VQRVAMA+ P+       P  S   P  ++LA  + +
Sbjct: 716 YKPHSENDMATVARVYVRSVVNYVQRVAMALAPA------PPSRSQSQPFMVSLAQNLVR 769

Query: 700 SYSYHLGAELL-RSDSVG--GDSVLKNLWQHSDAILCCSLKVPLQF 742
           SY  +LG +L  R +S G   + V K++W H +AI+CCS K    F
Sbjct: 770 SYRLNLGMDLFSRQESQGTEAEDVFKSVWNHLEAIVCCSWKTSPAF 815



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 77/109 (70%), Positives = 94/109 (86%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+ KYVRYT EQVEALERVY+ECPKPSS RR QL++E PIL+NIEPKQIKVWFQNRRCR
Sbjct: 1   MDSSKYVRYTNEQVEALERVYNECPKPSSARRSQLLQEYPILANIEPKQIKVWFQNRRCR 60

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           EKQRKEA+RL  +N KL+A+NK+LMEEN+RL KQ ++L  E   ++Q+L
Sbjct: 61  EKQRKEATRLINMNAKLSALNKMLMEENERLMKQTTELSMEVQVLRQEL 109


>gi|449533848|ref|XP_004173883.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like, partial
           [Cucumis sativus]
          Length = 293

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 226/294 (76%), Positives = 250/294 (85%), Gaps = 8/294 (2%)

Query: 42  ERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKL 101
           ER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKL
Sbjct: 1   ERLYYECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKL 60

Query: 102 TAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATTDASCDSVVT------TPQHS 154
           TAMN+LLMEENDRLQKQVSQLV EN Y +QQ + A  ATTD SC+SVVT      TP H 
Sbjct: 61  TAMNRLLMEENDRLQKQVSQLVYENSYFRQQTQNATLATTDTSCESVVTSGQQNLTPPHP 120

Query: 155 LRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAAR 214
            +DA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKPGPDS+GI AIS  C+GVAAR
Sbjct: 121 PKDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 179

Query: 215 ACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPAR 274
           ACGLV LEPT++AEILKD PSWFRDCR+++V  +   GN GTIELLY Q YAPTTLAPAR
Sbjct: 180 ACGLVGLEPTRVAEILKDWPSWFRDCRAVDVLNVLSTGNGGTIELLYMQLYAPTTLAPAR 239

Query: 275 DFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCD 328
           DFW LRYT+ L++GSLVVCERSL+ +  GP+      FVRAEMLPSG LIRPC+
Sbjct: 240 DFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVRAEMLPSGYLIRPCE 293


>gi|110349530|gb|ABG73240.1| class III HD-Zip protein HDZ31 [Ceratopteris richardii]
          Length = 773

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 273/690 (39%), Positives = 388/690 (56%), Gaps = 50/690 (7%)

Query: 77  WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL--- 133
           WFQNRRCREKQRKE  RLQ  N KL AMN++L+EEN+RLQKQ +QL+ EN Y++QQL   
Sbjct: 1   WFQNRRCREKQRKETGRLQHWNSKLNAMNQMLLEENERLQKQAAQLLVENQYLRQQLQLQ 60

Query: 134 --------RTAPATTDASCDSVVTTPQHSLRDAN-----NPAGLLSIAEETLAEFLSKAT 180
                   R    T D S +SVVT+ QH    ++     + +   ++AE+ L EFL+KA+
Sbjct: 61  HPQVDLNQRAVLHTADTSSESVVTSGQHQHSPSHASQEWSVSQWSALAEKILTEFLAKAS 120

Query: 181 GTAVDWVQMPGMKPGPDSVGIFAISQSCSG-VAARACGLVSLEPTKIAEILKDRPSWFRD 239
           G     + +PGMKPGPDS+    +  SC G +AA+AC  V L   K+AEI+K+R  W  D
Sbjct: 121 GGMAGGIPLPGMKPGPDSIEAM-VRPSCGGHIAAQACSYVDLGVYKVAEIIKNRHMWSYD 179

Query: 240 CRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG 299
           C+  E+ T F A + G IEL++TQ YAP+ L  A DF TLRYT  L+NG+LVVCE SL+ 
Sbjct: 180 CKKQEIMTSFHADHGGFIELVHTQMYAPSKLVAAWDFRTLRYTCLLENGNLVVCEGSLAA 239

Query: 300 SGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 359
                  A    FVRAEMLPSG LIRPC+ GGSI+ +VD +N    +    LRPLY++S 
Sbjct: 240 GQGAHEIAPLPGFVRAEMLPSGFLIRPCEQGGSIVMVVDDINSMPSTAANSLRPLYDTST 299

Query: 360 VVAQRMTIA---------ETSGEVVYGLGRQP-AVLRTFSQRLSRGFNDAVNGFNDDGWS 409
           ++A R+T           +  GE   G+   P + ++ FS RL RGFNDAVN   DDGW 
Sbjct: 300 LLAWRLTCKVLNHLRAHPKDKGEA--GMLSNPISSVQGFSHRLVRGFNDAVNSSPDDGWV 357

Query: 410 LMTCD-GAEDVIIAVN-STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR 467
            ++ +    +V I +  S  S+   +N T + A  GGI+CAKA +LL+N+  A L+ FLR
Sbjct: 358 PLSSELSYSNVTIHIKPSHHSIEFGANDTEA-ATRGGIICAKAFLLLRNLSSAALMSFLR 416

Query: 468 EHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEG 527
           E    W D + D     S K  +     +   +F+  +I      + E  E+LEV+RL+ 
Sbjct: 417 ERWVAWMDLDADLSVRDSCK--TTGNDNLLKRKFSSVKISE---SSSEQNEVLEVVRLQK 471

Query: 528 HSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLD 587
               + +     +  +LQ  S +++ +  A ++L+FAPID   PDD  LLPSGFR + L+
Sbjct: 472 PQPLKGENIPDFESFMLQFSSSMEDTSASAYAQLLFAPIDASVPDDSSLLPSGFRAMHLN 531

Query: 588 SKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDN 647
                 P+ L + +TLDL SSLE  P        S S H T   LTI FQ+ +++  +  
Sbjct: 532 V----CPERLVSLQTLDLASSLEDQPRLQ-----SQSPHETGCALTIVFQYAYKAENRSV 582

Query: 648 VATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGA 707
           V   A+Q +++++  +Q+ A+++         G + S G   A+ L   +  SY  HLG 
Sbjct: 583 VTIKAQQNLQTIVELLQQAAVSLKSHPAPLISGSQFSTG---AVLLVQQMVDSYRNHLGQ 639

Query: 708 ELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           ELL S     + + K  W    A++CC+ K
Sbjct: 640 ELLISADGSSEGLFKAFWNFQHAVVCCAWK 669


>gi|224035091|gb|ACN36621.1| unknown [Zea mays]
          Length = 425

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/331 (64%), Positives = 260/331 (78%), Gaps = 8/331 (2%)

Query: 411 MTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLR 467
           M+ DGAEDV IA+NS+ +     +  +S  F    GGILCAKASMLLQNVPPALLVRFLR
Sbjct: 1   MSSDGAEDVTIAINSSPNKLIGPHVNSSQLFTAIGGGILCAKASMLLQNVPPALLVRFLR 60

Query: 468 EHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEG 527
           EHRSEWAD  VDAYSAA+L+A  YA PG+R + F GSQ+I+PL HT+EHEE LEVIRLEG
Sbjct: 61  EHRSEWADPGVDAYSAAALRASPYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLEG 120

Query: 528 HSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLD 587
           HSL  ++  +SRD++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPLD
Sbjct: 121 HSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLD 180

Query: 588 SKTPDTPDTLTAHRTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQD 646
           +KT    D  +  RTLDL S+LEVG   T  A+ D+SS  +TRSVLTIAFQF +E++L++
Sbjct: 181 AKT----DPPSGTRTLDLASTLEVGSGGTTRASSDASSTCNTRSVLTIAFQFSYENHLRE 236

Query: 647 NVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLG 706
           +VA MARQYVR+V++SVQRVAMAI PS +   L  K +PGSPEA TLA WI +SY +H G
Sbjct: 237 SVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTG 296

Query: 707 AELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           AELLR+D+   D+ LK LWQHSD+I+CCSLK
Sbjct: 297 AELLRTDTQCTDASLKALWQHSDSIMCCSLK 327


>gi|110349546|gb|ABG73248.1| class III HD-Zip protein HDZ34 [Pinus taeda]
          Length = 558

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 224/473 (47%), Positives = 309/473 (65%), Gaps = 28/473 (5%)

Query: 289 SLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVP 348
           +LVVCERSL+     PN      FVRAEML SG LIRPC G GSI++IVDH++LEA   P
Sbjct: 3   NLVVCERSLNLGMVPPNEG----FVRAEMLSSGYLIRPCGGVGSIVYIVDHMDLEAGRAP 58

Query: 349 EVLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFND 398
           EVLRP+YESS ++AQ+MTIA          E +GE+V G   QPA LR  S R++R FND
Sbjct: 59  EVLRPMYESSAILAQKMTIAALRHLRSLAQEAAGEIVTGGTLQPAALRALSLRIARSFND 118

Query: 399 AVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL-----GGILCAKASML 453
           A+N F +DGW  +  DG +D+ I++NS+ S  T     +S   L     GG+LCAKASML
Sbjct: 119 AINSFPEDGWFSVASDGMDDISISLNSSWSPRTVGLKCSSSNNLWSDGDGGVLCAKASML 178

Query: 454 LQNVPPALLVRFLREHRSEWADF---NVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPL 510
           LQNVPPA+L+RFLREHRSEWAD+    +D  S+A+L+ G Y    +        ++ MPL
Sbjct: 179 LQNVPPAVLIRFLREHRSEWADWADCELDMSSSATLRTGVYGAAALAGAELGRREVPMPL 238

Query: 511 GHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF 570
            H+ EH+E++E+++ EG+  A++ A VS++++LLQ+C+G+DE A+G C++LVFAP+D   
Sbjct: 239 AHS-EHQEIMELVKFEGYDSARDGALVSKEMYLLQLCNGIDETAIGDCAQLVFAPVDGAL 297

Query: 571 PDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSS-SCHHTR 629
            DD PLLPSGFR+IPLD+      D      TLDL S LE G   + A  ++  S  + R
Sbjct: 298 SDDIPLLPSGFRVIPLDTG---FMDGYGLSCTLDLASMLEGGSDMDAAKTETGISSKNLR 354

Query: 630 SVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPE 689
           S++TIAFQF +E++  D+V+  AR+Y+R+V++SVQRVAMAI P  +  TLG +   G+ E
Sbjct: 355 SIVTIAFQFGYETHNCDSVSVAARKYMRTVVASVQRVAMAIAPR-VGSTLGLRNLSGTTE 413

Query: 690 ALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
            L L   I  SY  + G +LLR      + + K +W HSDA++CC+ K   +F
Sbjct: 414 VLALVQRIVGSYRINFGMDLLRKQPSNDEELFKMVWHHSDALICCTCKSLPEF 466


>gi|294462854|gb|ADE76969.1| unknown [Picea sitchensis]
          Length = 353

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 192/286 (67%), Positives = 231/286 (80%), Gaps = 3/286 (1%)

Query: 452 MLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLG 511
           MLLQNVPPALLVRFLREHRSEWAD N+DAYSAA+LKA  Y+ PG R   F+GSQ+I+PL 
Sbjct: 1   MLLQNVPPALLVRFLREHRSEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLA 60

Query: 512 HTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFP 571
           HT+EHEE LEVI+LEGH L QE+A +SRD+ LLQ+CSG+DENA GAC+ELVFAPIDE F 
Sbjct: 61  HTVEHEEFLEVIKLEGHGLTQEEAVLSRDMFLLQLCSGIDENAAGACAELVFAPIDESFA 120

Query: 572 DDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSV 631
           DD PLLPSGFR+IPL+S+T  +      +RTLDL S+LEVG A    +GDS +  + RSV
Sbjct: 121 DDAPLLPSGFRVIPLESRTDGSGGP---NRTLDLASALEVGSAGTRTSGDSGANSNLRSV 177

Query: 632 LTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEAL 691
           LTIAFQF +ES+L++NVA MARQYVRSV++SVQRVAMA+ PS LS  +GP+  PG+PEAL
Sbjct: 178 LTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMALAPSRLSAHVGPRPPPGTPEAL 237

Query: 692 TLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           TLA WICQSY  H+G +L R+D    +SVLK LW HSDAI+CCS+K
Sbjct: 238 TLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVK 283


>gi|110349534|gb|ABG73242.1| class III HD-Zip protein HDZ31A [Marsilea minuta]
          Length = 642

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/560 (40%), Positives = 326/560 (58%), Gaps = 35/560 (6%)

Query: 192 MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA 251
           MKPGPDS+G FA+++ C GVAA+ACG V LEP K+ EI+K+RP W +DCR L++   F A
Sbjct: 1   MKPGPDSIGAFALTRLCGGVAAQACGFVDLEPFKVGEIVKNRPLWLQDCRRLDILASFTA 60

Query: 252 GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL-SGSGAGPNPASAA 310
              G++EL++TQ Y+PTTL  ARDFWTLRYT  +++GSLV+CERSL +G G    P  A 
Sbjct: 61  DRGGSVELVHTQMYSPTTLDAARDFWTLRYTCCMEDGSLVICERSLAAGQGVQEIPVMAG 120

Query: 311 QFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMT---- 366
            FVRAEML SG  IRP + GG+++ +VD +N ++ S+ E +RPLY +S  +A+RMT    
Sbjct: 121 -FVRAEMLSSGFFIRPYEQGGAMVIVVDDMNFKSGSLLEGIRPLYTTSMTLARRMTYKVL 179

Query: 367 -----IAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVII 421
                 A+   E           LR FS RL RGFNDAVN F D+GW  +  DG   V I
Sbjct: 180 CHLRNFAKEKAEASLATNNPTVPLRGFSNRLIRGFNDAVNCFPDEGWISIINDGPSTVSI 239

Query: 422 AVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
            +N   +        +      GI+CAKAS+LLQ VPP LL+ FLRE    WAD   D  
Sbjct: 240 FINPPPNGKQIGGTESGTRGRNGIICAKASLLLQGVPPPLLIHFLRERWIAWADIGAD-- 297

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
              S++A     P  +P+     Q++ P+   +  +E+LEV+R++     + D     D 
Sbjct: 298 -VESVRASPNELPKKKPSSV---QVLQPI---VGQDEVLEVVRVQKTRPLRVDEVFQPDN 350

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
            LLQ+CS +DE   G  S+L+FAPID   PDD PLLPSGFR++ L S   ++     + +
Sbjct: 351 VLLQLCSSMDEIGTGEYSQLIFAPIDASVPDDVPLLPSGFRVMNLGSVKENS----ASSQ 406

Query: 602 TLDLTSSLEVGPATNPAAGDSS-SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVI 660
           TLDL SSLE     N     SS       S+LTIAFQ+ +++  +D +A   +++V++++
Sbjct: 407 TLDLASSLEDQSTNNTIPMRSSRGIQDQSSILTIAFQYMYKAESRDVLALNLQRHVQALV 466

Query: 661 SSVQRVAMAI---CPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGG 717
             +Q+ A+++    P+ ++   G        EAL L   I  SY  ++G ELL   +   
Sbjct: 467 DVLQQAAISLRLHLPTTMTGQCG-------LEALVLVQQITNSYRTYIGQELLPYRNGNA 519

Query: 718 DSVLKNLWQHSDAILCCSLK 737
           + + ++ W   D+++CC+ K
Sbjct: 520 EGLFRSFWNLKDSVVCCAWK 539


>gi|110349536|gb|ABG73243.1| class III HD-Zip protein HDZ31B [Marsilea minuta]
          Length = 642

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/560 (40%), Positives = 326/560 (58%), Gaps = 35/560 (6%)

Query: 192 MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA 251
           MKPGPDS+G FA+++ C GVAA+ACGLV LEP K+ EI+K+RP W +DCR L++   F A
Sbjct: 1   MKPGPDSIGAFALTRLCGGVAAQACGLVDLEPFKVGEIVKNRPLWLQDCRRLDILASFTA 60

Query: 252 GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL-SGSGAGPNPASAA 310
              G +EL++TQ YAPTTL  ARDFWTLRYT  +++GSLV+CERSL +G G    P    
Sbjct: 61  DRGGLVELVHTQMYAPTTLDAARDFWTLRYTCCMEDGSLVICERSLAAGQGVQEIPVMPG 120

Query: 311 QFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMT---- 366
            FVRAEML SG LIRP + GG+++ ++D +N ++ S+ + +RPLY +S  +A+RMT    
Sbjct: 121 -FVRAEMLSSGFLIRPYEQGGAMVIVIDDMNFKSGSLLDGIRPLYTTSMTLARRMTYKVL 179

Query: 367 -----IAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVII 421
                 A+   E           LR FS RL RGFNDAVN F D+GW  +  DG   V I
Sbjct: 180 CHLRNFAKEKAEASLATNNPAVPLRGFSNRLIRGFNDAVNCFPDEGWVSIINDGPSTVSI 239

Query: 422 AVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
            +N   +        +      GI+CAKAS+LLQ VPP LL+ FLRE    WAD   D  
Sbjct: 240 FINPPPNGKQFGGTESGTRGRNGIICAKASLLLQGVPPPLLLHFLRERWIAWADIGTD-- 297

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
              S+++     P  +P+     Q+I P+   +  +E+LE++R++     + D     D 
Sbjct: 298 -VESVRSSLNELPKKKPSSV---QVIQPI---VGQDEVLELVRVQKTRPLRVDEVFQPDS 350

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
            LLQ+CS +DE   G  S+L+FAPID   PDD PLLPSGFR++ L S   ++     + +
Sbjct: 351 VLLQLCSSMDEIGTGEYSQLIFAPIDASVPDDAPLLPSGFRVMNLGSVKENS----ASSQ 406

Query: 602 TLDLTSSLEVGPATNPAAGDSS-SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVI 660
           TLDL SSLE     N     SS       S+LTIAFQ+ +++  +D +A   +++V++++
Sbjct: 407 TLDLASSLEDRSTNNTIPMRSSRGIQDQSSILTIAFQYMYKAESRDVIALNVQRHVQALV 466

Query: 661 SSVQRVAMAI---CPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGG 717
             +Q+ A+++    P+ ++   G        EAL L   I  SY  ++G ELL   +   
Sbjct: 467 DVLQQAAISLRLHLPTTMTGQCG-------LEALVLVQQITDSYRTYIGQELLPYRNGDA 519

Query: 718 DSVLKNLWQHSDAILCCSLK 737
           + + ++ W   D+++CC+ K
Sbjct: 520 EGLFRSFWNLKDSVVCCAWK 539


>gi|194708610|gb|ACF88389.1| unknown [Zea mays]
          Length = 390

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/296 (64%), Positives = 224/296 (75%), Gaps = 5/296 (1%)

Query: 446 LCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQ 505
           +CAKASMLLQNVPPALLVRFLREHRSEWAD  +DAYS ASL+A  Y  PG+R   F G+Q
Sbjct: 1   MCAKASMLLQNVPPALLVRFLREHRSEWADPGIDAYSVASLRANPYTVPGLRAGGFMGNQ 60

Query: 506 IIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAP 565
           +I+PL  T+EHEE LEVIRLEGH  + E+  +SRD+ LLQ+CSGVDE+A GAC++LVFAP
Sbjct: 61  VILPLARTLEHEESLEVIRLEGHGFSHEEVLMSRDMFLLQLCSGVDEDAPGACAQLVFAP 120

Query: 566 IDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNP--AAGDSS 623
           IDE F DD PLLPSGFR+IPLD+KT D P   T  RTLDL S+LEVG   +   A+ D S
Sbjct: 121 IDESFADDAPLLPSGFRVIPLDAKT-DVPTATT--RTLDLASALEVGSGGSGMRASCDGS 177

Query: 624 SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKL 683
               TRSVLTIAFQF FE++L+++VA MA+QYVR V++SVQRVAMAI PS L   +  K 
Sbjct: 178 GTCATRSVLTIAFQFSFENHLRESVAAMAKQYVRGVMASVQRVAMAIAPSRLGSRIELKH 237

Query: 684 SPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVP 739
            PGSPEAL LA WI +SY  H G E+  SD+ G DS L   W+HSDAILCCSLK P
Sbjct: 238 PPGSPEALALATWIGRSYRAHTGTEIRWSDTEGADSPLMLFWKHSDAILCCSLKPP 293


>gi|41745612|gb|AAS10176.1| PHABULOSA-like protein [Antirrhinum majus]
          Length = 231

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 166/231 (71%), Positives = 193/231 (83%), Gaps = 10/231 (4%)

Query: 182 TAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCR 241
           TAVDWVQM GMKPGPDS+GI AIS++CSG+AARACGLVSLEPTK+AEILKDR SW+RDCR
Sbjct: 1   TAVDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLVSLEPTKVAEILKDRLSWYRDCR 60

Query: 242 SLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSG 301
            L++ +  P GN GTIEL+Y Q YAPTTLA ARDFWT+RYTT+L++GSLV+CERSL+ S 
Sbjct: 61  CLDIASAIPTGNGGTIELMYMQTYAPTTLASARDFWTMRYTTSLEDGSLVICERSLTSST 120

Query: 302 AGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVV 361
            GP    A  FVRAEMLPSG LIRPCDGGGSIIHIVDHL+L+AWSVPEVLRPLYESSK++
Sbjct: 121 GGPAGPLATCFVRAEMLPSGFLIRPCDGGGSIIHIVDHLDLDAWSVPEVLRPLYESSKIL 180

Query: 362 AQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNG 402
           AQ++T+A          E++GE+    GRQPAVLRT SQRL RGFNDA+NG
Sbjct: 181 AQKITVAALRHIRQIAQESNGEIQCSGGRQPAVLRTLSQRLCRGFNDALNG 231


>gi|110349538|gb|ABG73244.1| class III HD-Zip protein HDZ32 [Marsilea minuta]
          Length = 638

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 212/560 (37%), Positives = 319/560 (56%), Gaps = 29/560 (5%)

Query: 192 MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA 251
           MKPGPDS+G F +++ C GVAA+AC L  +EP KIAE +KDRPSW  DCR LE+   F A
Sbjct: 1   MKPGPDSIGAFPLTRLCGGVAAQACCLADMEPFKIAETVKDRPSWLPDCRKLEILASFSA 60

Query: 252 GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS-GSGAGPNPASAA 310
              G +EL++TQ YAPT L    +FW+LRYT  +++GSLVVCERSL+ G G    P +  
Sbjct: 61  DRGGVVELVHTQMYAPTVLYVPWEFWSLRYTCCMEDGSLVVCERSLAVGQGVQDMPITPG 120

Query: 311 QFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAET 370
            F RAEML S  LIRP + G S++ +VD +N ++ S+ E  +PLY++S ++A++ T    
Sbjct: 121 -FARAEMLTSEFLIRPYEQGVSMVVVVDDMNFKSGSLLEGFQPLYDTSVILAKKATCRAL 179

Query: 371 SGEVVYGLGRQPA-------VLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
           S   +  L ++ A        LR  S RL RGFNDAVN F D+GW  +   G   + + +
Sbjct: 180 S--YLRSLVKEKAEVSNPSSSLRGLSHRLVRGFNDAVNCFPDEGWVSVINSGPNTLSVHI 237

Query: 424 NSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVD-AYS 482
           N T          + +   GGI+C KAS++L + PP+LL+ FL+E  + WA+F++D  Y+
Sbjct: 238 NPTSHSKQLGGNESGIVTKGGIVCVKASLVLHDTPPSLLLCFLKEKWTTWAEFDMDLGYA 297

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
            + + A       +   +F+  Q + PL   +  EE++E +R++   +A+ +   + D  
Sbjct: 298 NSRIFAND-----LSKKKFSTVQKLQPL---VGQEEVVEFMRVQESDVARFNGVFTPDKF 349

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRT 602
           LLQ+C+  +E   G C +L+ APID    +   LLPSGFRI+ L+S      + L + +T
Sbjct: 350 LLQVCNNSEEVKPGECVQLICAPIDASMSEYVALLPSGFRILHLNS----IKEKLMSSQT 405

Query: 603 LDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISS 662
           LDL SSLE G        +S S   + SVL I FQF ++    D +   A+ +V++++  
Sbjct: 406 LDLASSLEYGKTE---MINSQSAQGSNSVLNIVFQFLYKPENHDIIVPNAQHHVQAIVEL 462

Query: 663 VQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLK 722
           +Q  A+++      P   P  S    E L L   I +SY  ++G ELL S     +++ K
Sbjct: 463 LQHAALSLRSPPPPPLPLPVKS--GMEHLILVQQIVESYRSYIGRELLSSPPGDAEAMFK 520

Query: 723 NLWQHSDAILCCSLKVPLQF 742
           + W   D+I+CC+ K   QF
Sbjct: 521 SFWSLKDSIVCCAWKPLPQF 540


>gi|226530146|ref|NP_001146177.1| uncharacterized protein LOC100279747 [Zea mays]
 gi|219886071|gb|ACL53410.1| unknown [Zea mays]
          Length = 293

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 157/229 (68%), Positives = 190/229 (82%), Gaps = 3/229 (1%)

Query: 364 RMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
           R    ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDVIIA 
Sbjct: 10  RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMCGDGMEDVIIAC 69

Query: 424 NSTKSLSTASNPTNSLAFLG--GILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           NS K + ++SNP       G  GI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N DAY
Sbjct: 70  NS-KKIRSSSNPATGFGAPGPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAY 128

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
           SA++LK    + PG+RP RF+GSQIIMPL HT+E+EE+LEV+RLEG +L  ++  +SRDI
Sbjct: 129 SASALKTSPCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQTLTHDEGLLSRDI 188

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
           HLLQ+C+G+DE ++G+C +LVFAPIDE+FPDD PL+ SGFR+IPLD KT
Sbjct: 189 HLLQLCTGMDEKSMGSCFQLVFAPIDELFPDDAPLVSSGFRVIPLDIKT 237


>gi|125569402|gb|EAZ10917.1| hypothetical protein OsJ_00759 [Oryza sativa Japonica Group]
          Length = 507

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 173/259 (66%), Positives = 197/259 (76%), Gaps = 37/259 (14%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D  KYVRYT EQVEALER+Y ECPKPSSLRRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 1   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 60

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN--------GYMKQ----- 131
           EKQRKE+SRLQ +NRKLTAMNKLLMEENDRLQKQVSQLV ++        G M++     
Sbjct: 61  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 120

Query: 132 ---------QLRTAPATTDASCDSVVTTP-----------QHSLRDANNPAGLLSIAEET 171
                    QL TA   TD SC+SVVT+            Q   RDA +PAGL+SIAEET
Sbjct: 121 PQAAAAAGHQLATA---TDTSCESVVTSGHHHQQQQHNVVQPPPRDA-SPAGLMSIAEET 176

Query: 172 LAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILK 231
           L EFLSKATGTAV+W+QMPGMKPGPDS+GI AIS  C+GVAARACGLV +EP K+AEILK
Sbjct: 177 LTEFLSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILK 236

Query: 232 DRPSWFRDCRSLEVFTMFP 250
           DRP W RDCRS++V T  P
Sbjct: 237 DRPLWLRDCRSMDVDTSSP 255



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 118/206 (57%), Gaps = 25/206 (12%)

Query: 547 CSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLT 606
           C+GV   A G    +  A + E+  D  PL     R + +D+ +P+         TLDL 
Sbjct: 213 CAGVAARACGLVG-MEPAKVAEILKDR-PLWLRDCRSMDVDTSSPNC--------TLDLA 262

Query: 607 SSLEVGP---------ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVR 657
           S+LE                    +++   +++V+TIAFQF F+ +LQD+VA MARQY+R
Sbjct: 263 STLEAATPRSRISGVNGGGGGCAAAAASSSSKAVMTIAFQFAFDGHLQDSVAAMARQYMR 322

Query: 658 SVISSVQRVAMAICPSGLS-PTLG---PKLSPGSPEALTLAHWICQSYSYHLGAELLRS- 712
           ++ISSVQR+A+A+  S L  P  G    +LSP +PEA TL  WICQSY +H G EL++S 
Sbjct: 323 NIISSVQRIAVALSSSRLVLPGAGAAAAQLSPVTPEAATLPRWICQSYRFHFGDELIKSV 382

Query: 713 -DSVGGDSVLKNLWQHSDAILCCSLK 737
             +   +S+LK +W H  AILCCSLK
Sbjct: 383 DANSSNESILKAVWHHPSAILCCSLK 408


>gi|224150191|ref|XP_002336921.1| hypothetical protein POPTRDRAFT_292259 [Populus trichocarpa]
 gi|222837134|gb|EEE75513.1| hypothetical protein POPTRDRAFT_292259 [Populus trichocarpa]
          Length = 231

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 158/231 (68%), Positives = 182/231 (78%), Gaps = 10/231 (4%)

Query: 182 TAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCR 241
           TAV+WVQMPGMKPGPDS+GI AIS  C+GVAARACGLV LEPT++AEILKDRPSWFRDCR
Sbjct: 1   TAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCR 60

Query: 242 SLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSG 301
           +++V       N GTIELLY Q YAPTTLAPARDF  LRYT+ L++GSLVVCERSL+ + 
Sbjct: 61  AVDVINAMSTANGGTIELLYMQLYAPTTLAPARDFLLLRYTSVLEDGSLVVCERSLNNTQ 120

Query: 302 AGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVV 361
            GP+      FVRAEMLPSG LIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS ++
Sbjct: 121 NGPSMPPTQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLL 180

Query: 362 AQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNG 402
           AQ+ T+A          E S   V G GR+PA LR  SQRLS+GFN+AVNG
Sbjct: 181 AQKTTMAALRHLRQISQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNG 231


>gi|110349560|gb|ABG73255.1| class III HD-Zip protein HDZ31 [Austrobaileya scandens]
          Length = 181

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/181 (82%), Positives = 163/181 (90%), Gaps = 9/181 (4%)

Query: 28  GKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 87
           GKYVRYTAEQVEALERVY+ECPKPSS+RRQQL+REC IL+NIEPKQIKVWFQNRRCR KQ
Sbjct: 1   GKYVRYTAEQVEALERVYTECPKPSSMRRQQLVRECSILANIEPKQIKVWFQNRRCRVKQ 60

Query: 88  RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-ATTDASCDS 146
           RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL+ ENGYM+QQL+ A  ATTD SC+S
Sbjct: 61  RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLLYENGYMRQQLQNASVATTDTSCES 120

Query: 147 VVTTPQHSL--------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDS 198
           V+T+ QH          +DANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD+
Sbjct: 121 VLTSGQHQQNPVQHPLPKDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDA 180

Query: 199 V 199
           +
Sbjct: 181 I 181


>gi|54290691|dbj|BAD62361.1| putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|54291065|dbj|BAD61742.1| putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
          Length = 559

 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 188/450 (41%), Positives = 245/450 (54%), Gaps = 114/450 (25%)

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGC 322
           Q YAPTTLAPA DFW LRYT+ L +GSLVVCERSLS    GP+      F+R EMLPSG 
Sbjct: 144 QLYAPTTLAPAHDFWLLRYTSILGDGSLVVCERSLSSKQGGPSMPLVQPFIRDEMLPSGF 203

Query: 323 LIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---ETSGEVVYGLG 379
           LIRP DGGGS+IHIVDH++LE WSVPEV+RPLYESS +VAQ++++A   + +  V+ G G
Sbjct: 204 LIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMAVAYKDTRSVITGWG 263

Query: 380 RQPAVLRTFSQR-------------------------------LSRGFNDAVNGFNDDGW 408
           R+ A L   SQ+                               L RGFN+ +NG  DDGW
Sbjct: 264 RKLAALHALSQKAHHVGLLNSRCFLVLAMNLQLKSVKNNFACSLFRGFNEVLNGLADDGW 323

Query: 409 SLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLG-GILCAKASMLLQNVPPALLVRFLR 467
           S++  DG +DV I+VNS+K     +  ++ L  +  G+LCAKASMLLQ + P        
Sbjct: 324 SVIESDGIDDVCISVNSSKVTGCNATFSSGLTIVSTGVLCAKASMLLQVILP-------- 375

Query: 468 EHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEG 527
                                                     L HT E  E LEVI+L G
Sbjct: 376 ------------------------------------------LAHTFEPAEFLEVIKL-G 392

Query: 528 HSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLD 587
           ++   +D  V RD+ LLQ+ +GV+E++ G CSEL+FAPID  F DD PLLPS        
Sbjct: 393 NTRNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSPLLPSA------- 445

Query: 588 SKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDN 647
                TP +  +            G   +  A  +SS    ++V+TIAFQF FES+LQ +
Sbjct: 446 -----TPWSRIS------------GINCSGCAAAASS----KAVMTIAFQFVFESHLQGS 484

Query: 648 VATMARQYVRSVISSVQRVAMAICPSGLSP 677
           V  MA+QY+ S+ISSVQR+A+ +  S L P
Sbjct: 485 VPAMAQQYMCSIISSVQRIAVVLSSSRLVP 514


>gi|224034025|gb|ACN36088.1| unknown [Zea mays]
          Length = 333

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 144/238 (60%), Positives = 179/238 (75%), Gaps = 4/238 (1%)

Query: 500 RFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACS 559
           RF+  Q+IMPL HT+E+EE+LEV+RLEG  L  ++A +SRDIHLLQ+C+G+DE +VG+  
Sbjct: 2   RFSEGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSF 61

Query: 560 ELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAA 619
           +LVFAPIDE FPDD PL+ SGFR+IPLD KT    D +++ RTLDL SSL+VG A   A+
Sbjct: 62  QLVFAPIDEHFPDDAPLISSGFRVIPLDVKT----DGVSSGRTLDLASSLDVGSAAPQAS 117

Query: 620 GDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTL 679
           G+S      RSVLTIAFQFP+E +LQD+VA MARQYVRSVIS+VQRV+MAI PS      
Sbjct: 118 GESPDDCSLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNA 177

Query: 680 GPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           G ++  G PEA TLA W+CQSY YHLG ELL      G+++LK LW H DA+LCCS K
Sbjct: 178 GHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFK 235


>gi|397135778|gb|AFO11386.1| revoluta, partial [Brassica rapa subsp. pekinensis]
 gi|397135780|gb|AFO11387.1| revoluta, partial [Brassica rapa subsp. pekinensis]
 gi|397135784|gb|AFO11389.1| revoluta, partial [Brassica juncea]
 gi|397135790|gb|AFO11392.1| revoluta, partial [Brassica napus]
          Length = 143

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 133/141 (94%), Positives = 135/141 (95%)

Query: 141 DASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG 200
           D SCDSVVTTPQHSLRDAN+PAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG
Sbjct: 3   DPSCDSVVTTPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG 62

Query: 201 IFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELL 260
           IFAISQ CSGVAARACGLVSLEP KIAEILKDRPSWFRDCRSLEVFTMFPAGN GTIEL+
Sbjct: 63  IFAISQRCSGVAARACGLVSLEPVKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELV 122

Query: 261 YTQAYAPTTLAPARDFWTLRY 281
           Y Q YAPTTLAPARDFWTLRY
Sbjct: 123 YMQTYAPTTLAPARDFWTLRY 143


>gi|397135786|gb|AFO11390.1| revoluta, partial [Brassica juncea]
          Length = 143

 Score =  278 bits (711), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 132/141 (93%), Positives = 134/141 (95%)

Query: 141 DASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG 200
           D SCDSVVTTPQHSLRDAN+PAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG
Sbjct: 3   DPSCDSVVTTPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG 62

Query: 201 IFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELL 260
           IFAISQ CSGVAARACGLVSLEP KIAEILKDRPSWFRDCRSLEVFTMFPAGN GTIEL+
Sbjct: 63  IFAISQRCSGVAARACGLVSLEPVKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELV 122

Query: 261 YTQAYAPTTLAPARDFWTLRY 281
           Y Q YAPTTLAPA DFWTLRY
Sbjct: 123 YMQTYAPTTLAPASDFWTLRY 143


>gi|397135793|gb|AFO11393.1| revoluta, partial [Brassica carinata]
          Length = 143

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 132/141 (93%), Positives = 134/141 (95%)

Query: 141 DASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG 200
           D SCDSVVTTPQHSLRDAN+PAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG
Sbjct: 3   DPSCDSVVTTPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG 62

Query: 201 IFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELL 260
           IFAISQ CSGVAARACGLVSLEP KIAEILKDRPSWFRDCRSLEVFTMFPAGN GTI L+
Sbjct: 63  IFAISQRCSGVAARACGLVSLEPVKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIVLV 122

Query: 261 YTQAYAPTTLAPARDFWTLRY 281
           Y Q YAPTTLAPARDFWTLRY
Sbjct: 123 YMQTYAPTTLAPARDFWTLRY 143


>gi|326522983|dbj|BAJ88537.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 190

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 124/169 (73%), Positives = 151/169 (89%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+GKYVRYT +QVE LERVY++CPKP+S RRQQL+RECPIL+NIE +QIKVWFQNRRCR
Sbjct: 22  MDSGKYVRYTPDQVEMLERVYADCPKPTSSRRQQLLRECPILANIEARQIKVWFQNRRCR 81

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +K RKE+SRL++VNRK++AMNKLLMEEN+RLQKQVSQLV EN  ++QQL+      D SC
Sbjct: 82  DKLRKESSRLESVNRKVSAMNKLLMEENERLQKQVSQLVHENAQVRQQLQNTSMANDTSC 141

Query: 145 DSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           +S +TTPQ+ +RDA+NP+GLLSIAEETL EFLSKATGTA++WVQMPGMK
Sbjct: 142 ESNLTTPQNPIRDASNPSGLLSIAEETLTEFLSKATGTAIEWVQMPGMK 190


>gi|444436400|gb|AGE09568.1| HB8-like protein, partial [Eucalyptus cladocalyx]
          Length = 212

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 131/216 (60%), Positives = 168/216 (77%), Gaps = 6/216 (2%)

Query: 456 NVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIE 515
           NVPPA+L+RFLREHRSEWAD ++DAYSAA++KA     PG R   F GSQ+I+PL HTIE
Sbjct: 1   NVPPAVLLRFLREHRSEWADSSIDAYSAAAIKASPCNMPGTRIGGF-GSQVILPLAHTIE 59

Query: 516 HEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGP 575
           HEE +EV++LE     ++D  +  DI LLQ+C+GVDENAVG C+EL+FAPID  F DD P
Sbjct: 60  HEEFMEVVKLENMGHYRDDMIMPSDIFLLQLCNGVDENAVGTCAELIFAPIDASFSDDAP 119

Query: 576 LLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSS-CHHTRSVLTI 634
           ++PSGFRIIPLD  +    D  + +RTLDL S+L+VGP  N A GD+S    +T+SV+TI
Sbjct: 120 IIPSGFRIIPLDPGS----DAASPNRTLDLASALDVGPTGNKAVGDNSGHSGNTKSVMTI 175

Query: 635 AFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAI 670
           AFQF FE +LQ+NVA+MARQY+RS+I+SVQRVA+A+
Sbjct: 176 AFQFAFELHLQENVASMARQYLRSIIASVQRVALAL 211


>gi|297596285|ref|NP_001042315.2| Os01g0200300 [Oryza sativa Japonica Group]
 gi|255672974|dbj|BAF04229.2| Os01g0200300 [Oryza sativa Japonica Group]
          Length = 394

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 147/301 (48%), Positives = 199/301 (66%), Gaps = 21/301 (6%)

Query: 452 MLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLG 511
           MLLQ+V P  L++FLREHRS+WAD N+DA+ A+++K      P  R   F+G Q+I+PL 
Sbjct: 1   MLLQDVSPPSLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSRLGGFSG-QVILPLA 59

Query: 512 HTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFP 571
           HT E EE LEVI+L G++   +D  V RD+ LLQ+ +GV+E++ G CSEL+FAPID  F 
Sbjct: 60  HTFEPEEFLEVIKL-GNASNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFS 118

Query: 572 DDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP---------ATNPAAGDS 622
           DD PLLPSGFRIIP+DS      DT + + TLDL S+LE                    +
Sbjct: 119 DDSPLLPSGFRIIPIDSPL----DTSSPNCTLDLASTLEAATPRSRISGVNGGGGGCAAA 174

Query: 623 SSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGL----SPT 678
           ++   +++V+TIAFQF F+ +LQD+VA MARQY+R++ISSVQR+A+A+  S L    +  
Sbjct: 175 AASSSSKAVMTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAGA 234

Query: 679 LGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVG--GDSVLKNLWQHSDAILCCSL 736
              +LSP +PEA TL  WICQSY +H G EL++S       +S+LK +W H  AILCCSL
Sbjct: 235 AAAQLSPVTPEAATLPRWICQSYRFHFGDELIKSVDANSSNESILKAVWHHPSAILCCSL 294

Query: 737 K 737
           K
Sbjct: 295 K 295


>gi|118482717|gb|ABK93277.1| unknown [Populus trichocarpa]
          Length = 294

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 131/198 (66%), Positives = 154/198 (77%), Gaps = 5/198 (2%)

Query: 541 IHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAH 600
           ++LLQ+CSGVDENA+GAC++LVFAPIDE F DD PLLPSGFR+IPLD KT D P    A 
Sbjct: 1   MYLLQLCSGVDENALGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKT-DAP---AAT 56

Query: 601 RTLDLTSSLEVGPA-TNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           RTLDL S+LEVGP    PA+   ++ ++ RSVLTIAFQF FE++ +DNVA MARQYVR V
Sbjct: 57  RTLDLASTLEVGPGGARPASEADTNSYNLRSVLTIAFQFTFENHFRDNVAAMARQYVRGV 116

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMAI PS LS  +GPK  P SPEALTLA WI +SY  H G EL R DS  GD+
Sbjct: 117 VASVQRVAMAISPSRLSSNMGPKSLPVSPEALTLARWIYRSYRIHTGGELFRVDSQAGDA 176

Query: 720 VLKNLWQHSDAILCCSLK 737
           +LK LW HSDAI+CCSLK
Sbjct: 177 LLKRLWHHSDAIMCCSLK 194


>gi|218198891|gb|EEC81318.1| hypothetical protein OsI_24480 [Oryza sativa Indica Group]
          Length = 330

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 154/373 (41%), Positives = 198/373 (53%), Gaps = 111/373 (29%)

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGC 322
           Q YAPTTLAPA DFW LRYT+ L +GSLVVCERSLS    GP+      F+R EMLPSG 
Sbjct: 20  QLYAPTTLAPAHDFWLLRYTSILGDGSLVVCERSLSSKQGGPSMPLVQPFIRDEMLPSGF 79

Query: 323 LIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-------------- 368
           LIRP DGGGS+IHIVDH++LE WSVPEV+RPLYESS +VAQ++++A              
Sbjct: 80  LIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMASCKIQSLRCLRQVA 139

Query: 369 -ETSGEVVYGLGRQPAVLRTFSQR-------------------------------LSRGF 396
            + +  V+ G GR+ A L   SQ+                               L RGF
Sbjct: 140 YKDTRSVITGWGRKLAALHALSQKAHHVGLLNSRCFLVLAMNLQFKSVKNNFACSLFRGF 199

Query: 397 NDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLG-GILCAKASMLLQ 455
           N+ +NG  DDGWS++  DG +DV I+VNS+K     +  ++ L  +  G+LCAKASMLLQ
Sbjct: 200 NEVLNGLADDGWSVIESDGIDDVCISVNSSKVTGCNATFSSGLTIVSTGVLCAKASMLLQ 259

Query: 456 NVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIE 515
                    FL                                        ++ LG+T  
Sbjct: 260 ---------FLE---------------------------------------VIKLGNTRN 271

Query: 516 HEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGP 575
           +++ L                V RD+ LLQ+ +GV+E++ G CSEL+FAPID  F DD P
Sbjct: 272 YQDTL----------------VHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSP 315

Query: 576 LLPSGFRIIPLDS 588
           LLPSGF IIP+DS
Sbjct: 316 LLPSGFYIIPIDS 328


>gi|148729437|gb|ABR09121.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 122/156 (78%), Positives = 142/156 (91%), Gaps = 1/156 (0%)

Query: 497 RPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVG 556
           RPTRFTGSQIIMPLGHTIEHEE+LEV+RLEGHSLAQEDAF+SRD+HLLQIC+G+DENAVG
Sbjct: 1   RPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVG 60

Query: 557 ACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA-HRTLDLTSSLEVGPAT 615
           ACSEL+FAPI+EMFPDD PL+PSGFR+IP+D+KT D  D LTA HRTLDLTSSLEVGP+ 
Sbjct: 61  ACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSP 120

Query: 616 NPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
             A+G++SS   +R +LTIAFQFPFE+NLQ+NVA M
Sbjct: 121 ENASGNTSSSSSSRCILTIAFQFPFENNLQENVAGM 156


>gi|397135782|gb|AFO11388.1| truncated revoluta, partial [Brassica rapa]
          Length = 144

 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 126/141 (89%), Positives = 129/141 (91%), Gaps = 1/141 (0%)

Query: 141 DASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG 200
           D SCDSVVTTPQHSLRDAN+PAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG
Sbjct: 3   DPSCDSVVTTPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG 62

Query: 201 IFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELL 260
           IFAISQ CSGVAARACGLVSLEP KIAEILKDRPSWFRDCRSLEVFTMFPAG+ GTIEL+
Sbjct: 63  IFAISQRCSGVAARACGLVSLEPVKIAEILKDRPSWFRDCRSLEVFTMFPAGDGGTIELV 122

Query: 261 YTQAYAPTTLAPARDFW-TLR 280
           Y Q YAPTTLA    F  TLR
Sbjct: 123 YMQTYAPTTLASCPRFLGTLR 143


>gi|148729435|gb|ABR09120.1| REV [Arabidopsis thaliana]
 gi|148729441|gb|ABR09123.1| REV [Arabidopsis thaliana]
 gi|148729443|gb|ABR09124.1| REV [Arabidopsis thaliana]
 gi|148729447|gb|ABR09126.1| REV [Arabidopsis thaliana]
 gi|148729449|gb|ABR09127.1| REV [Arabidopsis thaliana]
 gi|148729451|gb|ABR09128.1| REV [Arabidopsis thaliana]
 gi|148729453|gb|ABR09129.1| REV [Arabidopsis thaliana]
 gi|148729459|gb|ABR09132.1| REV [Arabidopsis thaliana]
 gi|148729461|gb|ABR09133.1| REV [Arabidopsis thaliana]
 gi|148729463|gb|ABR09134.1| REV [Arabidopsis thaliana]
 gi|148729475|gb|ABR09140.1| REV [Arabidopsis thaliana]
 gi|148729479|gb|ABR09142.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 123/156 (78%), Positives = 142/156 (91%), Gaps = 1/156 (0%)

Query: 497 RPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVG 556
           RPTRFTGSQIIMPLGHTIEHEE+LEV+RLEGHSLAQEDAF+SRD+HLLQIC+G+DENAVG
Sbjct: 1   RPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVG 60

Query: 557 ACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA-HRTLDLTSSLEVGPAT 615
           ACSEL+FAPI+EMFPDD PL+PSGFR+IP+D+KT D  D LTA HRTLDLTSSLEVGP+ 
Sbjct: 61  ACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSP 120

Query: 616 NPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
             A+G+SSS   +R +LTIAFQFPFE+NLQ+NVA M
Sbjct: 121 ENASGNSSSSSSSRCILTIAFQFPFENNLQENVAGM 156


>gi|12002295|gb|AAG43283.1| HD-zipper protein [Oryza sativa]
          Length = 233

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 130/201 (64%), Positives = 156/201 (77%), Gaps = 5/201 (2%)

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRT 602
           LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPLD KT D P   +A RT
Sbjct: 1   LLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDGKT-DAP---SATRT 56

Query: 603 LDLTSSLEVGPA-TNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           LDL S+LEVG   T  A+ D+SS  +TRSVLTIAFQF +E++L+++VA MARQYVR+V++
Sbjct: 57  LDLASTLEVGSGGTTRASSDTSSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVA 116

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVL 721
           SVQRVAMAI PS L   +  K  PGSPEA TLA WI +SY +H GA+LLR+DS   DS L
Sbjct: 117 SVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHTGADLLRTDSQSMDSSL 176

Query: 722 KNLWQHSDAILCCSLKVPLQF 742
           K +WQHSD+I+CCSLK    F
Sbjct: 177 KAMWQHSDSIMCCSLKAAPVF 197


>gi|148729445|gb|ABR09125.1| REV [Arabidopsis thaliana]
 gi|148729455|gb|ABR09130.1| REV [Arabidopsis thaliana]
 gi|148729457|gb|ABR09131.1| REV [Arabidopsis thaliana]
 gi|148729465|gb|ABR09135.1| REV [Arabidopsis thaliana]
 gi|148729467|gb|ABR09136.1| REV [Arabidopsis thaliana]
 gi|148729469|gb|ABR09137.1| REV [Arabidopsis thaliana]
 gi|148729471|gb|ABR09138.1| REV [Arabidopsis thaliana]
 gi|148729473|gb|ABR09139.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 122/156 (78%), Positives = 141/156 (90%), Gaps = 1/156 (0%)

Query: 497 RPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVG 556
           RPTRFTGSQIIMPLGHTIEHEE+LEV+RLEGHSLAQEDAF+SRD+HLLQIC+G+DENAVG
Sbjct: 1   RPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVG 60

Query: 557 ACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA-HRTLDLTSSLEVGPAT 615
           ACSEL+FAPI+EMFPDD PL+PSGFR+IP+D+KT D  D LTA HRTLDLTSSLEVGP+ 
Sbjct: 61  ACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSP 120

Query: 616 NPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
             A+G+S S   +R +LTIAFQFPFE+NLQ+NVA M
Sbjct: 121 ENASGNSFSSSSSRCILTIAFQFPFENNLQENVAGM 156


>gi|148729439|gb|ABR09122.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 123/156 (78%), Positives = 142/156 (91%), Gaps = 1/156 (0%)

Query: 497 RPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVG 556
           RPTRFTGSQIIMPLGHTIEHEE+LEV+RLEGHSLAQEDAF+SRD+HLLQIC+G+DENAVG
Sbjct: 1   RPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVG 60

Query: 557 ACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA-HRTLDLTSSLEVGPAT 615
           ACSEL+FAPI+EMFPDD PL+PSGFR+IP+D+KT D  D LTA HRTLDLTSSLEVGP+ 
Sbjct: 61  ACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSP 120

Query: 616 NPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
             A+G+SSS   +R +LTIAFQFPFE+NLQ+NVA M
Sbjct: 121 ENASGNSSSISSSRCILTIAFQFPFENNLQENVAGM 156


>gi|148729477|gb|ABR09141.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 122/156 (78%), Positives = 140/156 (89%), Gaps = 1/156 (0%)

Query: 497 RPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVG 556
           RPTRFTGSQIIMPLGHTIEHEE+LEV+RLEGHSLAQEDAF+SRD+HLLQIC+G+DENAVG
Sbjct: 1   RPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVG 60

Query: 557 ACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA-HRTLDLTSSLEVGPAT 615
           ACSEL+FAPI+EMFPDD PL+PSGFR+IP+D+KT D  D LTA HRTLDLTSSLEVGP+ 
Sbjct: 61  ACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSP 120

Query: 616 NPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
             A+G+S S    R +LTIAFQFPFE+NLQ+NVA M
Sbjct: 121 ENASGNSFSSSSLRCILTIAFQFPFENNLQENVAGM 156


>gi|226506820|ref|NP_001141882.1| uncharacterized protein LOC100274025 [Zea mays]
 gi|194706286|gb|ACF87227.1| unknown [Zea mays]
          Length = 292

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 126/198 (63%), Positives = 155/198 (78%), Gaps = 5/198 (2%)

Query: 541 IHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAH 600
           ++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPLD+KT    D  +  
Sbjct: 1   MYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKT----DPPSGT 56

Query: 601 RTLDLTSSLEVGPA-TNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           RTLDL S+LEVG   T   + D+SS  +TRSVLTIAFQF +E++L+++VA MARQYVR+V
Sbjct: 57  RTLDLASTLEVGSGGTTRTSSDASSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTV 116

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVA AI PS L   L  K +PGSPEA TLA WI +SY +H GAELLR+D+   D+
Sbjct: 117 VASVQRVARAIAPSRLGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDA 176

Query: 720 VLKNLWQHSDAILCCSLK 737
            LK LWQHSD+I+CCSLK
Sbjct: 177 SLKALWQHSDSIMCCSLK 194


>gi|326496473|dbj|BAJ94698.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 167

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 112/143 (78%), Positives = 125/143 (87%)

Query: 226 IAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTL 285
           + EILKDRPSWFRDCRSLEVFT+ P  N GTIEL+YTQ YAPTTL PARDFWTLRYTT +
Sbjct: 1   VVEILKDRPSWFRDCRSLEVFTVLPGANGGTIELVYTQLYAPTTLVPARDFWTLRYTTIV 60

Query: 286 DNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAW 345
           ++GSLVVCERSLSGS  GP+ ASA QFVR EMLPSG L+RPCDGGGSI+HIV HL  EAW
Sbjct: 61  EDGSLVVCERSLSGSRGGPSAASAQQFVRDEMLPSGYLVRPCDGGGSIVHIVHHLEFEAW 120

Query: 346 SVPEVLRPLYESSKVVAQRMTIA 368
           ++PEVLRPLYESS+VVAQ+MT A
Sbjct: 121 NIPEVLRPLYESSRVVAQKMTTA 143


>gi|414871782|tpg|DAA50339.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 174

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 126/159 (79%), Positives = 132/159 (83%), Gaps = 11/159 (6%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           S G     Q+D GKYVRYT EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK
Sbjct: 16  SPGGGGAPQVDTGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75

Query: 76  VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT 135
           VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS+LV ENGYM+QQL  
Sbjct: 76  VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQLHN 135

Query: 136 -APATTDASCDSVVTTPQHS----------LRDANNPAG 163
            + ATTD SC+SVVT+ QH            RDANNPAG
Sbjct: 136 PSAATTDTSCESVVTSGQHHQQQNPAAPRPQRDANNPAG 174


>gi|414871784|tpg|DAA50341.1| TPA: hypothetical protein ZEAMMB73_581465 [Zea mays]
          Length = 298

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 124/193 (64%), Positives = 151/193 (78%), Gaps = 5/193 (2%)

Query: 546 ICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDL 605
            CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPLD+KT    D  +  RTLDL
Sbjct: 12  FCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKT----DPPSGTRTLDL 67

Query: 606 TSSLEVGPA-TNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQ 664
            S+LEVG   T  A+ D+SS  +TRSVLTIAFQF +E++L+++VA MARQYVR+V++SVQ
Sbjct: 68  ASTLEVGSGGTTRASSDASSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQ 127

Query: 665 RVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNL 724
           RVAMAI PS +   L  K +PGSPEA TLA WI +SY +H GAELLR+D+   D+ LK L
Sbjct: 128 RVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKAL 187

Query: 725 WQHSDAILCCSLK 737
           WQHSD+I+CCSLK
Sbjct: 188 WQHSDSIMCCSLK 200


>gi|109729910|tpg|DAA05769.1| TPA_inf: class III HD-Zip protein CNA2 [Medicago truncatula]
          Length = 287

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 119/196 (60%), Positives = 151/196 (77%), Gaps = 11/196 (5%)

Query: 546 ICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDS-KTPDTPDTLTAHRTLD 604
           +CSG+DENA+G C+EL+FAPID  F DD PLLPSGFRIIPL+S K   +P+     RTLD
Sbjct: 1   LCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLESGKESSSPN-----RTLD 55

Query: 605 LTSSLEVGPATNPAAGDS---SSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           L S+L++GP  N A+ D+   S C   RSV+TIAF+F +ES++Q+NVA MARQYVRS+IS
Sbjct: 56  LASALDIGPTGNRASSDNAGNSGC--VRSVMTIAFEFAYESHMQENVACMARQYVRSIIS 113

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVL 721
           SVQRVA+A+ PS LS   G +   G+PEA TLAHWIC SY  +LG ELL+S++ G +SVL
Sbjct: 114 SVQRVALALSPSNLSSHAGLRSPLGTPEAQTLAHWICNSYRCYLGVELLKSNTEGKESVL 173

Query: 722 KNLWQHSDAILCCSLK 737
           K+LW HSDA+LCC+LK
Sbjct: 174 KSLWHHSDAVLCCTLK 189


>gi|397135788|gb|AFO11391.1| truncated revoluta, partial [Brassica juncea]
          Length = 141

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 114/127 (89%), Positives = 118/127 (92%), Gaps = 1/127 (0%)

Query: 141 DASCDS-VVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSV 199
           D SCDS + TTPQHSLRDAN+PAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSV
Sbjct: 3   DPSCDSPLKTTPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSV 62

Query: 200 GIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIEL 259
           GIFAISQ CSGVAARACGLVSLEP KIAEILKDRPSWFRDCRSLEVFTMF AG+ GTIEL
Sbjct: 63  GIFAISQRCSGVAARACGLVSLEPVKIAEILKDRPSWFRDCRSLEVFTMFLAGHGGTIEL 122

Query: 260 LYTQAYA 266
           +Y Q YA
Sbjct: 123 VYMQTYA 129


>gi|91940097|gb|ABE66391.1| homeobox leucine-zipper protein [Striga asiatica]
          Length = 150

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 115/151 (76%), Positives = 130/151 (86%), Gaps = 14/151 (9%)

Query: 348 PEVLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFN 397
           PEVLRPLYESSKV+AQR TIA          ETSGEVVYGLGRQPAVLRTFSQRLSRGFN
Sbjct: 1   PEVLRPLYESSKVLAQRTTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFN 60

Query: 398 DAVNGFNDDGWSLMTC-DGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQN 456
           DA+NGFNDDGWSL+ C DG +DVI+AV+S K+++ AS   N+++ +GG+LCAKASMLLQN
Sbjct: 61  DAINGFNDDGWSLLNCDDGGDDVIVAVSSAKNVTGAS---NNISMIGGVLCAKASMLLQN 117

Query: 457 VPPALLVRFLREHRSEWADFNVDAYSAASLK 487
           VP A+LVRFLREHRSEWADFNVDAYSAASLK
Sbjct: 118 VPAAVLVRFLREHRSEWADFNVDAYSAASLK 148


>gi|212721696|ref|NP_001131313.1| uncharacterized protein LOC100192627 [Zea mays]
 gi|194691156|gb|ACF79662.1| unknown [Zea mays]
          Length = 284

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 115/191 (60%), Positives = 140/191 (73%), Gaps = 8/191 (4%)

Query: 550 VDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSL 609
           +DE ++G+C +LVFAPIDE+FPDD PL+ SGFR+IPLD KT   P    + RTLDL SSL
Sbjct: 1   MDEKSMGSCFQLVFAPIDELFPDDAPLVSSGFRVIPLDIKTDGPP----SGRTLDLASSL 56

Query: 610 EVGPATNPAAGDSS-SCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAM 668
           EVG  T   AG+ S    + RSVLTIAFQFP+E++LQD VA MARQYVRS++S+VQRV+M
Sbjct: 57  EVGATTQQVAGNGSQDVCNLRSVLTIAFQFPYETHLQDTVAAMARQYVRSIVSAVQRVSM 116

Query: 669 AICPS--GLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQ 726
           AI PS  GL+ T G KL  GSPEA TL  WICQSY YHLG +L+      G+S+L+  W 
Sbjct: 117 AISPSHSGLN-TAGQKLISGSPEAATLVRWICQSYRYHLGVDLVSHSDQAGESLLRMFWD 175

Query: 727 HSDAILCCSLK 737
           H DA+LCCS K
Sbjct: 176 HQDAVLCCSFK 186


>gi|222625450|gb|EEE59582.1| hypothetical protein OsJ_11886 [Oryza sativa Japonica Group]
          Length = 152

 Score =  221 bits (563), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 107/123 (86%), Positives = 111/123 (90%)

Query: 11  QQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           +Q  SS G     Q+D GKYVRYT EQVEALERVY ECPKPSSLRRQQLIRECPILSNIE
Sbjct: 14  RQDRSSPGGGGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIE 73

Query: 71  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMK 130
           PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS+LV ENGYM+
Sbjct: 74  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMR 133

Query: 131 QQL 133
           QQL
Sbjct: 134 QQL 136


>gi|227809762|gb|ACP41073.1| unknown [Carruanthus ringens]
 gi|227809770|gb|ACP41077.1| unknown [Cephalophyllum pillansii]
 gi|227809776|gb|ACP41080.1| unknown [Drosanthemum speciosum]
          Length = 120

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 105/120 (87%), Positives = 113/120 (94%), Gaps = 1/120 (0%)

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           QIKVWFQNRRCREKQRKE+SRLQTVNRKL+AMNKLLMEENDRLQKQVSQLVCENG+M+QQ
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 133 LRTA-PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           L+ A P  TD SC+SVVTT Q+SL+D NNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG
Sbjct: 61  LQPALPPNTDGSCESVVTTSQYSLKDTNNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 120


>gi|148283423|gb|ABQ57292.1| hox32, partial [Oryza sativa Indica Group]
          Length = 148

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 107/148 (72%), Positives = 119/148 (80%), Gaps = 3/148 (2%)

Query: 372 GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLST 431
           GE+ YG GRQPAVLRTFSQRLSRGFNDAVNGF DDGWSLM+ DGAEDV IA NS+ +   
Sbjct: 1   GEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAEDVTIAFNSSPNKLV 60

Query: 432 ASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKA 488
            S+  +S  F    GGILCAKASMLLQNVPPALLVRFLREHRSEWAD  VDAYSAA+L+A
Sbjct: 61  GSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAAALRA 120

Query: 489 GSYAYPGMRPTRFTGSQIIMPLGHTIEH 516
             YA PG+R   F GSQ+I+PL HT+EH
Sbjct: 121 SPYAVPGLRAGGFMGSQVILPLAHTLEH 148


>gi|227809764|gb|ACP41074.1| unknown [Faucaria felina]
 gi|227809766|gb|ACP41075.1| unknown [Mossia intervallaris]
 gi|227809774|gb|ACP41079.1| unknown [Polymita steenbokensis]
          Length = 120

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 104/120 (86%), Positives = 112/120 (93%), Gaps = 1/120 (0%)

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           QIKVWFQNRRCREKQRKE+SRLQTVNRKL+AMNKLLMEENDRLQKQVSQLVCENG+M+QQ
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 133 LRTA-PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           L+ A P  TD SC+SVVTT Q+SL+D NNPAGLLSIAEETLAEFLSKATGTAVDWVQM G
Sbjct: 61  LQPALPPNTDGSCESVVTTSQYSLKDTNNPAGLLSIAEETLAEFLSKATGTAVDWVQMLG 120


>gi|227809768|gb|ACP41076.1| unknown [Delosperma echinatum]
          Length = 120

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 104/120 (86%), Positives = 112/120 (93%), Gaps = 1/120 (0%)

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           QIKVWFQNRRCREKQRKE+SRLQTV RKL+AMNKLLMEENDRLQKQVSQLVCENG+M+QQ
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVIRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 133 LRTA-PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           L+ A P  TD SC+SVVTT Q+SL+D NNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG
Sbjct: 61  LQPALPPNTDGSCESVVTTSQYSLKDTNNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 120


>gi|227809772|gb|ACP41078.1| unknown [Scopelogena bruynsii]
          Length = 120

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 103/120 (85%), Positives = 111/120 (92%), Gaps = 1/120 (0%)

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           QIKVWFQNRRCREKQRKE+SRLQTVNRKL+AMNKLLMEENDRLQKQVSQLVCENG+M+QQ
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 133 LRTA-PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           L+ A P  TD SC+SVVTT  +SL+D NNPAGLLSIAEETLAEFLSKATGTAVDWVQM G
Sbjct: 61  LQPALPPNTDGSCESVVTTSHYSLKDTNNPAGLLSIAEETLAEFLSKATGTAVDWVQMLG 120


>gi|227809760|gb|ACP41072.1| unknown [Pleiospilos simulans]
          Length = 120

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 103/120 (85%), Positives = 111/120 (92%), Gaps = 1/120 (0%)

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           QIKVWFQNRRCREKQRKE+SRLQTVNRKL+AMNKLLMEENDRLQKQVSQLVCENG+M+QQ
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 133 LRTA-PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           L+ A P  T  SC+SVVTT Q+SL+D NNPAGLLSIAEETLAEFLSKATGTAVDWVQM G
Sbjct: 61  LQPALPPNTHGSCESVVTTSQYSLKDTNNPAGLLSIAEETLAEFLSKATGTAVDWVQMLG 120


>gi|224165518|ref|XP_002338824.1| predicted protein [Populus trichocarpa]
 gi|222873518|gb|EEF10649.1| predicted protein [Populus trichocarpa]
          Length = 142

 Score =  210 bits (534), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 98/112 (87%), Positives = 103/112 (91%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           N   +DNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQN
Sbjct: 10  NPINMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 69

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           RRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +Q 
Sbjct: 70  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 121


>gi|413917202|gb|AFW57134.1| hypothetical protein ZEAMMB73_352358 [Zea mays]
          Length = 806

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 113/205 (55%), Positives = 132/205 (64%), Gaps = 45/205 (21%)

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTD 141
           R REKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVS+LV +NG              
Sbjct: 110 RIREKQRKESSRLQIVNRKLSAMNKLLMEENDRLQKQVSRLVLDNG-------------- 155

Query: 142 ASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGI 201
                                 LL+I EETLAEF+SKATGTAV+WVQM GM+PGPDSVGI
Sbjct: 156 ----------------------LLAIVEETLAEFMSKATGTAVNWVQMVGMEPGPDSVGI 193

Query: 202 FAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLY 261
            A+S +CSGVAARACGLV       AEI KDR SWFRDCR ++V  + P GN GTIEL+Y
Sbjct: 194 VAVSHNCSGVAARACGLV-------AEIHKDRASWFRDCRHVDVLHVIPTGNGGTIELIY 246

Query: 262 TQAYAPTTLAPARDFWTLRYTTTLD 286
            Q +   T+   ++    RY   L+
Sbjct: 247 IQGFGFVTMPCVKE--AYRYIKYLN 269


>gi|110349564|gb|ABG73257.1| class III HD-Zip protein HDZ32B [Austrobaileya scandens]
          Length = 129

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 106/130 (81%), Positives = 113/130 (86%), Gaps = 8/130 (6%)

Query: 77  WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-T 135
           WFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +QQ + T
Sbjct: 1   WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQTQNT 60

Query: 136 APATTDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
           A  TTDASC+SVVT      TPQH  RDA +PAGLLSIAEETL EFLSKATGTAV+W+QM
Sbjct: 61  AITTTDASCESVVTSGQHHLTPQHLPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWIQM 119

Query: 190 PGMKPGPDSV 199
           PGMKPGPDS+
Sbjct: 120 PGMKPGPDSI 129


>gi|110349562|gb|ABG73256.1| class III HD-Zip protein HDZ32A [Austrobaileya scandens]
          Length = 129

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 105/130 (80%), Positives = 112/130 (86%), Gaps = 8/130 (6%)

Query: 77  WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-T 135
           WFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY +QQ + T
Sbjct: 1   WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQTQNT 60

Query: 136 APATTDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
           A  TTD SC+SVVT      TPQH  RDA +PAGLLSIAEETL EFLSKATGTAV+W+QM
Sbjct: 61  AITTTDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWIQM 119

Query: 190 PGMKPGPDSV 199
           PGMKPGPDS+
Sbjct: 120 PGMKPGPDSI 129


>gi|227809758|gb|ACP41071.1| unknown [Mesembryanthemum aitonis]
          Length = 118

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 101/120 (84%), Positives = 106/120 (88%), Gaps = 3/120 (2%)

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           QIKVWFQNRRCREKQRKE+SRLQTVNRKL+AMNKLLMEENDRLQKQVSQLV ENG+M+QQ
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVSENGFMRQQ 60

Query: 133 LRT-APATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           L T  P   D SC+S  TTPQ  LRDANNPAGLLSIAEE LAEFLSKATGTAVDWVQM G
Sbjct: 61  LHTPPPPNADGSCESAATTPQ--LRDANNPAGLLSIAEEALAEFLSKATGTAVDWVQMLG 118


>gi|110349558|gb|ABG73254.1| class III HD-Zip protein HDZ33 [Cycas revoluta]
          Length = 129

 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 103/130 (79%), Positives = 112/130 (86%), Gaps = 10/130 (7%)

Query: 77  WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA 136
           WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV +NG ++QQ++ A
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYDNGCLRQQIQAA 60

Query: 137 P-ATTDASCDSVVT--------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWV 187
             ATTD SC+SVVT        T QH  RDA +PAGLLSIAEETLA+FLSKATGTAVDW+
Sbjct: 61  SMATTDTSCESVVTSGPRQHHLTSQHPPRDA-SPAGLLSIAEETLAQFLSKATGTAVDWI 119

Query: 188 QMPGMKPGPD 197
           QMPGMKPGPD
Sbjct: 120 QMPGMKPGPD 129


>gi|227809744|gb|ACP41064.1| unknown [Carruanthus ringens]
 gi|227809746|gb|ACP41065.1| unknown [Cephalophyllum pillansii]
 gi|227809750|gb|ACP41067.1| unknown [Scopelogena bruynsii]
 gi|227809752|gb|ACP41068.1| unknown [Pleiospilos simulans]
 gi|227809754|gb|ACP41069.1| unknown [Delosperma echinatum]
          Length = 125

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 101/126 (80%), Positives = 106/126 (84%), Gaps = 8/126 (6%)

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LV ENGY + Q
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 133 L-RTAPATTDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVD 185
             +T  A+ D SC+SVVT      TPQH  RDA +PAGLLSIAEETLAEFLSKATGTAVD
Sbjct: 61  TSKTGLASKDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLAEFLSKATGTAVD 119

Query: 186 WVQMPG 191
           WVQMPG
Sbjct: 120 WVQMPG 125


>gi|227809738|gb|ACP41061.1| unknown [Mesembryanthemum aitonis]
          Length = 125

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 101/126 (80%), Positives = 106/126 (84%), Gaps = 8/126 (6%)

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LV ENGY +QQ
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRQQ 60

Query: 133 L-RTAPATTDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVD 185
             +   A+ D SC+SVVT      TPQH  RDA +PAGLLSIAEETLAEFLSKATGTAVD
Sbjct: 61  TQKPGIASKDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLAEFLSKATGTAVD 119

Query: 186 WVQMPG 191
           WVQMPG
Sbjct: 120 WVQMPG 125


>gi|227809740|gb|ACP41062.1| unknown [Mossia intervallaris]
          Length = 125

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 100/126 (79%), Positives = 105/126 (83%), Gaps = 8/126 (6%)

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LV ENGY + Q
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 133 L-RTAPATTDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVD 185
             +T  A+ D SC+SVVT      TPQH  RDA +PAGLLSIAEETLAEFLSKATGTAVD
Sbjct: 61  TSKTGLASKDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLAEFLSKATGTAVD 119

Query: 186 WVQMPG 191
           WVQM G
Sbjct: 120 WVQMIG 125


>gi|227809742|gb|ACP41063.1| unknown [Polymita steenbokensis]
          Length = 125

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 100/126 (79%), Positives = 105/126 (83%), Gaps = 8/126 (6%)

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LV ENGY + Q
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 133 L-RTAPATTDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVD 185
             +T  A+ D SC+SVVT      TPQH  RDA +PAGLLSIAEETLAEFLSKATGTAVD
Sbjct: 61  TSKTGLASKDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLAEFLSKATGTAVD 119

Query: 186 WVQMPG 191
           WVQM G
Sbjct: 120 WVQMLG 125


>gi|110349548|gb|ABG73249.1| class III HD-Zip protein HDZ35 [Pinus taeda]
          Length = 399

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/299 (37%), Positives = 164/299 (54%), Gaps = 18/299 (6%)

Query: 444 GILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTG 503
           GIL  KAS+LLQ V P +L RFLREHR+EW D+ ++    AS          M+     G
Sbjct: 15  GILSVKASLLLQEVSPTMLARFLREHRTEWMDYELNFNYKASY------CQNMQTAGLHG 68

Query: 504 S--QIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSEL 561
           S  Q+ +PL  + + +E LEVI+LE  S  +E    S +  +LQ+C+G+        ++L
Sbjct: 69  SFRQVSLPLTQSADQDESLEVIKLE--STGEETNIKSNETFILQLCNGISGTTASGWAQL 126

Query: 562 VFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP--ATNPAA 619
           VFAP+D    D+ PLLPSGFRII ++    +  D     RTLDLTS LE G        A
Sbjct: 127 VFAPVDASLSDELPLLPSGFRIITIN----NYKDQCCLSRTLDLTSHLEGGSEGCRFHTA 182

Query: 620 GDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTL 679
           GD     ++ SVLT+AFQF +E+ ++D V   A  Y + V+  +++ A+ I P+  +   
Sbjct: 183 GDPDVLCYS-SVLTVAFQFKYEAQIRDLVTVKAHHYAQRVLEFIRKAAVLIMPACETSQK 241

Query: 680 GPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS-VGGDSVLKNLWQHSDAILCCSLK 737
           G   S  S E+  L + I Q Y    G +L ++++ V  D + K  W H DAI+CC+ K
Sbjct: 242 GRNPSVCSLESKILVYHIVQKYRNFFGMDLFKTETAVNADILFKAFWNHKDAIICCTSK 300


>gi|227809756|gb|ACP41070.1| unknown [Drosanthemum speciosum]
          Length = 125

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/126 (76%), Positives = 102/126 (80%), Gaps = 8/126 (6%)

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           QIKV   NRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LV ENGY + Q
Sbjct: 1   QIKVVVSNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 133 L-RTAPATTDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVD 185
             +T  A+ D SC+SVVT      TPQH  RDA +PAGLLSIAEETLAEFLSKATGTAVD
Sbjct: 61  TSKTGLASKDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLAEFLSKATGTAVD 119

Query: 186 WVQMPG 191
           WVQM G
Sbjct: 120 WVQMLG 125


>gi|45593094|gb|AAS68136.1| homeodomain leucine zipper protein 32 [Oryza sativa Japonica Group]
          Length = 132

 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 85/127 (66%), Positives = 101/127 (79%), Gaps = 4/127 (3%)

Query: 486 LKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQ 545
           L+A  YA PG+R   F GSQ+I+PL HT+EHEE LEVIRLEGHSL  ++  +SRD++LLQ
Sbjct: 1   LRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQ 60

Query: 546 ICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDL 605
           +CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPLD KT    D  +A RTLDL
Sbjct: 61  LCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDGKT----DAPSATRTLDL 116

Query: 606 TSSLEVG 612
            S+LEVG
Sbjct: 117 ASTLEVG 123


>gi|414871785|tpg|DAA50342.1| TPA: hypothetical protein ZEAMMB73_581465 [Zea mays]
          Length = 251

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 88/143 (61%), Positives = 110/143 (76%), Gaps = 1/143 (0%)

Query: 601 RTLDLTSSLEVGPA-TNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
           RTLDL S+LEVG   T  A+ D+SS  +TRSVLTIAFQF +E++L+++VA MARQYVR+V
Sbjct: 16  RTLDLASTLEVGSGGTTRASSDASSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTV 75

Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
           ++SVQRVAMAI PS +   L  K +PGSPEA TLA WI +SY +H GAELLR+D+   D+
Sbjct: 76  VASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDA 135

Query: 720 VLKNLWQHSDAILCCSLKVPLQF 742
            LK LWQHSD+I+CCSLK    F
Sbjct: 136 SLKALWQHSDSIMCCSLKAAPVF 158


>gi|227809748|gb|ACP41066.1| unknown [Faucaria felina]
          Length = 112

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/113 (77%), Positives = 93/113 (82%), Gaps = 8/113 (7%)

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LV ENGY + Q
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 133 L-RTAPATTDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSK 178
             +T  A+ D SC+SVVT      TPQH  RDA +PAGLLSIAEETLAEFLSK
Sbjct: 61  TSKTGLASKDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLAEFLSK 112


>gi|170678818|gb|ACB31469.1| REV, partial [Arabidopsis thaliana]
 gi|170678820|gb|ACB31470.1| REV, partial [Arabidopsis thaliana]
 gi|170678822|gb|ACB31471.1| REV, partial [Arabidopsis thaliana]
 gi|170678824|gb|ACB31472.1| REV, partial [Arabidopsis thaliana]
 gi|170678826|gb|ACB31473.1| REV, partial [Arabidopsis thaliana]
 gi|170678828|gb|ACB31474.1| REV, partial [Arabidopsis thaliana]
 gi|170678830|gb|ACB31475.1| REV, partial [Arabidopsis thaliana]
 gi|170678832|gb|ACB31476.1| REV, partial [Arabidopsis thaliana]
 gi|170678834|gb|ACB31477.1| REV, partial [Arabidopsis thaliana]
 gi|170678836|gb|ACB31478.1| REV, partial [Arabidopsis thaliana]
 gi|170678838|gb|ACB31479.1| REV, partial [Arabidopsis thaliana]
 gi|170678840|gb|ACB31480.1| REV, partial [Arabidopsis thaliana]
 gi|170678842|gb|ACB31481.1| REV, partial [Arabidopsis thaliana]
 gi|170678844|gb|ACB31482.1| REV, partial [Arabidopsis thaliana]
 gi|170678846|gb|ACB31483.1| REV, partial [Arabidopsis thaliana]
 gi|170678848|gb|ACB31484.1| REV, partial [Arabidopsis thaliana]
 gi|170678850|gb|ACB31485.1| REV, partial [Arabidopsis thaliana]
 gi|170678852|gb|ACB31486.1| REV, partial [Arabidopsis thaliana]
 gi|170678854|gb|ACB31487.1| REV, partial [Arabidopsis thaliana]
 gi|170678856|gb|ACB31488.1| REV, partial [Arabidopsis thaliana]
 gi|170678858|gb|ACB31489.1| REV, partial [Arabidopsis thaliana]
 gi|170678860|gb|ACB31490.1| REV, partial [Arabidopsis thaliana]
 gi|170678862|gb|ACB31491.1| REV, partial [Arabidopsis thaliana]
 gi|170678864|gb|ACB31492.1| REV, partial [Arabidopsis thaliana]
          Length = 82

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 78/82 (95%), Positives = 80/82 (97%)

Query: 155 LRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAAR 214
           LRDAN+PAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQ C+GVAAR
Sbjct: 1   LRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQRCNGVAAR 60

Query: 215 ACGLVSLEPTKIAEILKDRPSW 236
           ACGLVSLEP KIAEILKDRPSW
Sbjct: 61  ACGLVSLEPMKIAEILKDRPSW 82


>gi|297725273|ref|NP_001175000.1| Os06g0720500 [Oryza sativa Japonica Group]
 gi|255677403|dbj|BAH93728.1| Os06g0720500 [Oryza sativa Japonica Group]
          Length = 138

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 73/106 (68%), Positives = 86/106 (81%)

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGC 322
           Q YAPTTLAPA DFW LRYT+ L +GSLVVCERSLS    GP+      F+R EMLPSG 
Sbjct: 31  QLYAPTTLAPAHDFWLLRYTSILGDGSLVVCERSLSSKQGGPSMPLVQPFIRDEMLPSGF 90

Query: 323 LIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA 368
           LIRP DGGGS+IHIVDH++LE WSVPEV+RPLYESS +VAQ++++A
Sbjct: 91  LIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMA 136


>gi|170678722|gb|ACB31421.1| PHB, partial [Arabidopsis thaliana]
 gi|170678724|gb|ACB31422.1| PHB, partial [Arabidopsis thaliana]
 gi|170678726|gb|ACB31423.1| PHB, partial [Arabidopsis thaliana]
 gi|170678728|gb|ACB31424.1| PHB, partial [Arabidopsis thaliana]
 gi|170678730|gb|ACB31425.1| PHB, partial [Arabidopsis thaliana]
 gi|170678732|gb|ACB31426.1| PHB, partial [Arabidopsis thaliana]
 gi|170678734|gb|ACB31427.1| PHB, partial [Arabidopsis thaliana]
 gi|170678736|gb|ACB31428.1| PHB, partial [Arabidopsis thaliana]
 gi|170678738|gb|ACB31429.1| PHB, partial [Arabidopsis thaliana]
 gi|170678740|gb|ACB31430.1| PHB, partial [Arabidopsis thaliana]
 gi|170678742|gb|ACB31431.1| PHB, partial [Arabidopsis thaliana]
 gi|170678744|gb|ACB31432.1| PHB, partial [Arabidopsis thaliana]
 gi|170678746|gb|ACB31433.1| PHB, partial [Arabidopsis thaliana]
 gi|170678748|gb|ACB31434.1| PHB, partial [Arabidopsis thaliana]
 gi|170678750|gb|ACB31435.1| PHB, partial [Arabidopsis thaliana]
 gi|170678752|gb|ACB31436.1| PHB, partial [Arabidopsis thaliana]
 gi|170678754|gb|ACB31437.1| PHB, partial [Arabidopsis thaliana]
 gi|170678756|gb|ACB31438.1| PHB, partial [Arabidopsis thaliana]
 gi|170678758|gb|ACB31439.1| PHB, partial [Arabidopsis thaliana]
 gi|170678760|gb|ACB31440.1| PHB, partial [Arabidopsis thaliana]
 gi|170678762|gb|ACB31441.1| PHB, partial [Arabidopsis thaliana]
 gi|170678764|gb|ACB31442.1| PHB, partial [Arabidopsis thaliana]
 gi|170678766|gb|ACB31443.1| PHB, partial [Arabidopsis thaliana]
 gi|170678768|gb|ACB31444.1| PHB, partial [Arabidopsis thaliana]
          Length = 82

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 72/82 (87%), Positives = 77/82 (93%)

Query: 160 NPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLV 219
           NPAGLLSIAEE LAEFLSKATGTAVDWVQM GMKPGPDS+GI AIS++CSG+AARACGLV
Sbjct: 1   NPAGLLSIAEEALAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLV 60

Query: 220 SLEPTKIAEILKDRPSWFRDCR 241
           SLEP K+AEILKDRPSW RDCR
Sbjct: 61  SLEPMKVAEILKDRPSWLRDCR 82


>gi|3868829|dbj|BAA34235.1| CRHB1 [Ceratopteris richardii]
          Length = 157

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/111 (65%), Positives = 93/111 (83%)

Query: 28  GKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 87
           GKYVRYT+EQV+ALE++Y ECPKP+ L+RQQLIREC IL N++ KQIKVWFQNRRCREKQ
Sbjct: 19  GKYVRYTSEQVQALEKLYCECPKPTLLQRQQLIRECSILRNVDHKQIKVWFQNRRCREKQ 78

Query: 88  RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPA 138
           RKE  RLQ++N KLT +N +LMEEN +LQ+ V+QLV  N  +++QL + P+
Sbjct: 79  RKEWCRLQSLNGKLTPINTMLMEENVQLQQHVAQLVTINHALRRQLSSTPS 129


>gi|413917976|gb|AFW57908.1| hypothetical protein ZEAMMB73_425798 [Zea mays]
          Length = 672

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 84/111 (75%), Gaps = 2/111 (1%)

Query: 176 LSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPS 235
           +SKATGTAV+WVQM GM+PGPDSVGI A+S +CS VAARACGLVSLEPTK+AEI KDR S
Sbjct: 1   MSKATGTAVNWVQMVGMEPGPDSVGIVAVSHNCSVVAARACGLVSLEPTKVAEIHKDRAS 60

Query: 236 WFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLD 286
           WFRDCR ++V  + P GN GTIEL+Y Q +   T+   ++    RY   L+
Sbjct: 61  WFRDCRHVDVLHVIPTGNGGTIELIYIQGFGFVTMPCVKE--AYRYIKYLN 109


>gi|148283421|gb|ABQ57291.1| hox29, partial [Oryza sativa Indica Group]
          Length = 102

 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 69/102 (67%), Positives = 76/102 (74%)

Query: 230 LKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGS 289
           LKDRP W RDCRS++V  + PAG  GTIELLY Q YAPTTLA ARDFW LRYT+ LD+GS
Sbjct: 1   LKDRPLWLRDCRSMDVVNVLPAGANGTIELLYMQLYAPTTLALARDFWLLRYTSILDDGS 60

Query: 290 LVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGG 331
           LVVCERSLS    GP+      F+R EMLPSG LIRP D GG
Sbjct: 61  LVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDVGG 102


>gi|170677980|gb|ACB31050.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677982|gb|ACB31051.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677984|gb|ACB31052.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677986|gb|ACB31053.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677988|gb|ACB31054.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677990|gb|ACB31055.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677992|gb|ACB31056.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677994|gb|ACB31057.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677996|gb|ACB31058.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677998|gb|ACB31059.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678000|gb|ACB31060.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678002|gb|ACB31061.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678004|gb|ACB31062.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678006|gb|ACB31063.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678008|gb|ACB31064.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678010|gb|ACB31065.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678012|gb|ACB31066.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678014|gb|ACB31067.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678016|gb|ACB31068.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678018|gb|ACB31069.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678020|gb|ACB31070.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678022|gb|ACB31071.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678024|gb|ACB31072.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678026|gb|ACB31073.1| ATHB-8, partial [Arabidopsis thaliana]
          Length = 85

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/85 (77%), Positives = 77/85 (90%), Gaps = 1/85 (1%)

Query: 150 TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCS 209
           TPQH  RDA+ PAGLLSIA+ETL EF+SKATGTAV+WVQMPGMKPGPDS+GI AIS  C+
Sbjct: 1   TPQHQPRDAS-PAGLLSIADETLTEFISKATGTAVEWVQMPGMKPGPDSIGIVAISHGCT 59

Query: 210 GVAARACGLVSLEPTKIAEILKDRP 234
           G+AARACGLV L+PT++AEILKD+P
Sbjct: 60  GIAARACGLVGLDPTRVAEILKDKP 84


>gi|148283425|gb|ABQ57293.1| hox33, partial [Oryza sativa Indica Group]
          Length = 106

 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 68/106 (64%), Positives = 83/106 (78%), Gaps = 3/106 (2%)

Query: 408 WSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVR 464
           WSL++ DG+ED+ I+VNS+ +    S+ + +  F    GGILCAKASMLLQNVPPALLVR
Sbjct: 1   WSLLSSDGSEDITISVNSSPNKLVGSHVSPNPLFSTVGGGILCAKASMLLQNVPPALLVR 60

Query: 465 FLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPL 510
           FLREHRSEWAD  VDAYSAASL+A  YA PG+R + F GSQ+I+PL
Sbjct: 61  FLREHRSEWADPGVDAYSAASLRASPYAVPGLRTSGFMGSQVILPL 106


>gi|170678770|gb|ACB31445.1| PHV, partial [Arabidopsis thaliana]
 gi|170678772|gb|ACB31446.1| PHV, partial [Arabidopsis thaliana]
 gi|170678774|gb|ACB31447.1| PHV, partial [Arabidopsis thaliana]
 gi|170678776|gb|ACB31448.1| PHV, partial [Arabidopsis thaliana]
 gi|170678778|gb|ACB31449.1| PHV, partial [Arabidopsis thaliana]
 gi|170678780|gb|ACB31450.1| PHV, partial [Arabidopsis thaliana]
 gi|170678782|gb|ACB31451.1| PHV, partial [Arabidopsis thaliana]
 gi|170678784|gb|ACB31452.1| PHV, partial [Arabidopsis thaliana]
 gi|170678786|gb|ACB31453.1| PHV, partial [Arabidopsis thaliana]
 gi|170678788|gb|ACB31454.1| PHV, partial [Arabidopsis thaliana]
 gi|170678790|gb|ACB31455.1| PHV, partial [Arabidopsis thaliana]
 gi|170678792|gb|ACB31456.1| PHV, partial [Arabidopsis thaliana]
 gi|170678794|gb|ACB31457.1| PHV, partial [Arabidopsis thaliana]
 gi|170678796|gb|ACB31458.1| PHV, partial [Arabidopsis thaliana]
 gi|170678798|gb|ACB31459.1| PHV, partial [Arabidopsis thaliana]
 gi|170678800|gb|ACB31460.1| PHV, partial [Arabidopsis thaliana]
 gi|170678802|gb|ACB31461.1| PHV, partial [Arabidopsis thaliana]
 gi|170678804|gb|ACB31462.1| PHV, partial [Arabidopsis thaliana]
 gi|170678806|gb|ACB31463.1| PHV, partial [Arabidopsis thaliana]
 gi|170678808|gb|ACB31464.1| PHV, partial [Arabidopsis thaliana]
 gi|170678810|gb|ACB31465.1| PHV, partial [Arabidopsis thaliana]
 gi|170678812|gb|ACB31466.1| PHV, partial [Arabidopsis thaliana]
 gi|170678814|gb|ACB31467.1| PHV, partial [Arabidopsis thaliana]
 gi|170678816|gb|ACB31468.1| PHV, partial [Arabidopsis thaliana]
          Length = 73

 Score =  128 bits (322), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/72 (84%), Positives = 67/72 (93%)

Query: 159 NNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGL 218
           NNPA LLSIAEETLAEFL KATGTAVDWVQM GMKPGPDS+GI A+S++CSG+AARACGL
Sbjct: 2   NNPANLLSIAEETLAEFLCKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGL 61

Query: 219 VSLEPTKIAEIL 230
           VSLEP K+AEIL
Sbjct: 62  VSLEPMKVAEIL 73


>gi|413921242|gb|AFW61174.1| hypothetical protein ZEAMMB73_060529 [Zea mays]
          Length = 570

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 102/193 (52%), Gaps = 50/193 (25%)

Query: 519 LLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLP 578
           ++ V    G  L  ++A +SRDIHLLQ                                 
Sbjct: 80  MMNVNLFLGQPLTHDEALLSRDIHLLQ--------------------------------- 106

Query: 579 SGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSS-SCHHTRSVLTIAFQ 637
                           D +++ RTLDL SSL+VG A   A+GD+    ++ R VLTI FQ
Sbjct: 107 ----------------DGVSSGRTLDLASSLDVGSAAPQASGDAPPDDYNLRYVLTITFQ 150

Query: 638 FPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWI 697
           FP+E++LQD+VATMA QYV SV+S+VQRV+MAI PS      G ++  G PEA TLA W+
Sbjct: 151 FPYETHLQDSVATMAHQYVCSVVSTVQRVSMAISPSESGLNAGQRMLSGFPEAATLARWV 210

Query: 698 CQSYSYHLGAELL 710
           CQSY YHLG E L
Sbjct: 211 CQSYHYHLGVETL 223


>gi|170678028|gb|ACB31074.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678034|gb|ACB31077.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678036|gb|ACB31078.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678038|gb|ACB31079.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678042|gb|ACB31081.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678046|gb|ACB31083.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678048|gb|ACB31084.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678050|gb|ACB31085.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678052|gb|ACB31086.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678060|gb|ACB31090.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678062|gb|ACB31091.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678066|gb|ACB31093.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678068|gb|ACB31094.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678070|gb|ACB31095.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678072|gb|ACB31096.1| ATHB-15, partial [Arabidopsis thaliana]
          Length = 81

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/76 (81%), Positives = 69/76 (90%), Gaps = 1/76 (1%)

Query: 152 QHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGV 211
           Q+  RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKPGPDS+GI AIS  C+GV
Sbjct: 7   QNPQRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCTGV 65

Query: 212 AARACGLVSLEPTKIA 227
           AARACGLV LEPT++A
Sbjct: 66  AARACGLVGLEPTRVA 81


>gi|170678030|gb|ACB31075.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678032|gb|ACB31076.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678040|gb|ACB31080.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678044|gb|ACB31082.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678054|gb|ACB31087.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678056|gb|ACB31088.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678058|gb|ACB31089.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678064|gb|ACB31092.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678074|gb|ACB31097.1| ATHB-15, partial [Arabidopsis thaliana]
          Length = 81

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/76 (80%), Positives = 69/76 (90%), Gaps = 1/76 (1%)

Query: 152 QHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGV 211
           Q+  RDA+ PAGLLSIAEETLAEFLSKATGTAV+W+QMPGMKPGPDS+GI AIS  C+GV
Sbjct: 7   QNPQRDAS-PAGLLSIAEETLAEFLSKATGTAVEWIQMPGMKPGPDSIGIIAISHGCTGV 65

Query: 212 AARACGLVSLEPTKIA 227
           AARACGLV LEPT++A
Sbjct: 66  AARACGLVGLEPTRVA 81


>gi|414883577|tpg|DAA59591.1| TPA: putative receptor-like kinase family protein, partial [Zea
           mays]
          Length = 665

 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 73/147 (49%), Positives = 92/147 (62%), Gaps = 18/147 (12%)

Query: 82  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT-APATT 140
           RCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVS+LV +NGYMK +L + + ATT
Sbjct: 462 RCREKQRKESSRLQIVNRKLSAMNKLLMEENDRLQKQVSRLVLDNGYMKNRLHSPSVATT 521

Query: 141 DASCDSVVTTPQH---------SLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           D +C+ VVT+ QH         S +    P+ ++      +   L   T + V  +    
Sbjct: 522 DTTCECVVTSGQHNQQPSSSASSTKGCEQPSRIVCYPNMVMHLMLISLTVSNVILIAAWS 581

Query: 192 MKPGPDSVGIFAISQSCSGVAARACGL 218
                   G  A+S +CSGVAARACGL
Sbjct: 582 --------GFRAVSHNCSGVAARACGL 600


>gi|18412529|ref|NP_565223.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
 gi|147744564|sp|P46607.3|HGL2_ARATH RecName: Full=Homeobox-leucine zipper protein GLABRA 2; AltName:
           Full=HD-ZIP protein ATHB-10; AltName:
           Full=Homeobox-leucine zipper protein ATHB-10
 gi|13430764|gb|AAK26004.1|AF360294_1 putative homeobox protein GLABRA2 [Arabidopsis thaliana]
 gi|1212757|emb|CAA91183.1| HD-ZIP [Arabidopsis thaliana]
 gi|20152552|emb|CAD29714.1| homeodomain-leucine zipper 10 [Arabidopsis thaliana]
 gi|25054963|gb|AAN71955.1| putative homeobox protein GLABRA2 [Arabidopsis thaliana]
 gi|332198190|gb|AEE36311.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
          Length = 747

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 156/637 (24%), Positives = 272/637 (42%), Gaps = 116/637 (18%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           ++G+   ++    KY R+T +Q+  +E ++ E P P   +RQQL ++      + P+Q+K
Sbjct: 91  AAGNKGTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVK 146

Query: 76  VWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEEN--------------DRLQKQ 118
            WFQNRR + K   +R E S L+    KL   NK + E                D L  +
Sbjct: 147 FWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGPDDLHLE 206

Query: 119 VSQLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSK 178
            S+L  E   ++  L   P    ASC       +H L   +   G+ ++ +  +AE  ++
Sbjct: 207 NSKLKAELDKLRAALGRTPYPLQASCSD---DQEHRLGSLDFYTGVFALEKSRIAEISNR 263

Query: 179 AT------GTAVDWVQMPGMKPGPDSVGI------FAISQSCSG------VAARACGLVS 220
           AT       T+ + + +  ++ G + +        F  +Q+ S        A+R  G+V 
Sbjct: 264 ATLELQKMATSGEPMWLRSVETGREILNYDEYLKEFPQAQASSFPGRKTIEASRDAGIVF 323

Query: 221 LEPTKIAEILKDRPSW-------FRDCRSLEVFTM--FPAGNAGTIELLYTQAYAPTTLA 271
           ++  K+A+   D   W            +++V      P+   G I+L++ +    T + 
Sbjct: 324 MDAHKLAQSFMDVGQWKETFACLISKAATVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVV 383

Query: 272 PARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGG 331
           P R+ + +R    L      + + S+S   +  N    A  ++   LPSGC+I     G 
Sbjct: 384 PTREVYFVRSCRQLSPEKWAIVDVSVSVEDS--NTEKEASLLKCRKLPSGCIIEDTSNGH 441

Query: 332 SIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-------------------ETSG 372
           S +  V+HL++ A +V  + R L  +      R  +A                   + S 
Sbjct: 442 SKVTWVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSL 501

Query: 373 EVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTA 432
            V    GR+ +VL+  +QR+++ F  A+   +   W+ +T    +D  + V+S K+L   
Sbjct: 502 GVTTLAGRK-SVLK-MAQRMTQSFYRAIAASSYHQWTKITTKTGQD--MRVSSRKNLHDP 557

Query: 433 SNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAY--SAASLKA 488
             PT      G I+CA +S+ L  V PALL  F R+   R EW   +  A+  S A+L  
Sbjct: 558 GEPT------GVIVCASSSLWLP-VSPALLFDFFRDEARRHEWDALSNGAHVQSIANLSK 610

Query: 489 GSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICS 548
           G          +  G+ + +    T++  E   +  L+  S    ++ V        + +
Sbjct: 611 G----------QDRGNSVAI---QTVKSRE-KSIWVLQDSSTNSYESVV--------VYA 648

Query: 549 GVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIP 585
            VD N     ++LV A  D   P +  +LPSGF IIP
Sbjct: 649 PVDIN----TTQLVLAGHD---PSNIQILPSGFSIIP 678


>gi|12324584|gb|AAG52245.1|AC011717_13 homeobox protein (GLABRA2); 66648-63167 [Arabidopsis thaliana]
 gi|1695244|gb|AAC80260.1| homeodomain protein [Arabidopsis thaliana]
          Length = 745

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 156/637 (24%), Positives = 272/637 (42%), Gaps = 116/637 (18%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           ++G+   ++    KY R+T +Q+  +E ++ E P P   +RQQL ++      + P+Q+K
Sbjct: 89  AAGNKGTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVK 144

Query: 76  VWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEEN--------------DRLQKQ 118
            WFQNRR + K   +R E S L+    KL   NK + E                D L  +
Sbjct: 145 FWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGPDDLHLE 204

Query: 119 VSQLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSK 178
            S+L  E   ++  L   P    ASC       +H L   +   G+ ++ +  +AE  ++
Sbjct: 205 NSKLKAELDKLRAALGRTPYPLQASCSD---DQEHRLGSLDFYTGVFALEKSRIAEISNR 261

Query: 179 AT------GTAVDWVQMPGMKPGPDSVGI------FAISQSCSG------VAARACGLVS 220
           AT       T+ + + +  ++ G + +        F  +Q+ S        A+R  G+V 
Sbjct: 262 ATLELQKMATSGEPMWLRSVETGREILNYDEYLKEFPQAQASSFPGRKTIEASRDAGIVF 321

Query: 221 LEPTKIAEILKDRPSW-------FRDCRSLEVFTM--FPAGNAGTIELLYTQAYAPTTLA 271
           ++  K+A+   D   W            +++V      P+   G I+L++ +    T + 
Sbjct: 322 MDAHKLAQSFMDVGQWKETFACLISKAATVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVV 381

Query: 272 PARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGG 331
           P R+ + +R    L      + + S+S   +  N    A  ++   LPSGC+I     G 
Sbjct: 382 PTREVYFVRSCRQLSPEKWAIVDVSVSVEDS--NTEKEASLLKCRKLPSGCIIEDTSNGH 439

Query: 332 SIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-------------------ETSG 372
           S +  V+HL++ A +V  + R L  +      R  +A                   + S 
Sbjct: 440 SKVTWVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSL 499

Query: 373 EVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTA 432
            V    GR+ +VL+  +QR+++ F  A+   +   W+ +T    +D  + V+S K+L   
Sbjct: 500 GVTTLAGRK-SVLK-MAQRMTQSFYRAIAASSYHQWTKITTKTGQD--MRVSSRKNLHDP 555

Query: 433 SNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAY--SAASLKA 488
             PT      G I+CA +S+ L  V PALL  F R+   R EW   +  A+  S A+L  
Sbjct: 556 GEPT------GVIVCASSSLWLP-VSPALLFDFFRDEARRHEWDALSNGAHVQSIANLSK 608

Query: 489 GSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICS 548
           G          +  G+ + +    T++  E   +  L+  S    ++ V        + +
Sbjct: 609 G----------QDRGNSVAI---QTVKSRE-KSIWVLQDSSTNSYESVV--------VYA 646

Query: 549 GVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIP 585
            VD N     ++LV A  D   P +  +LPSGF IIP
Sbjct: 647 PVDIN----TTQLVLAGHD---PSNIQILPSGFSIIP 676


>gi|334184032|ref|NP_001185443.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
 gi|332198191|gb|AEE36312.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
          Length = 776

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 156/637 (24%), Positives = 272/637 (42%), Gaps = 116/637 (18%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           ++G+   ++    KY R+T +Q+  +E ++ E P P   +RQQL ++      + P+Q+K
Sbjct: 120 AAGNKGTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVK 175

Query: 76  VWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEEN--------------DRLQKQ 118
            WFQNRR + K   +R E S L+    KL   NK + E                D L  +
Sbjct: 176 FWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGPDDLHLE 235

Query: 119 VSQLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSK 178
            S+L  E   ++  L   P    ASC       +H L   +   G+ ++ +  +AE  ++
Sbjct: 236 NSKLKAELDKLRAALGRTPYPLQASCSD---DQEHRLGSLDFYTGVFALEKSRIAEISNR 292

Query: 179 AT------GTAVDWVQMPGMKPGPDSVGI------FAISQSCSG------VAARACGLVS 220
           AT       T+ + + +  ++ G + +        F  +Q+ S        A+R  G+V 
Sbjct: 293 ATLELQKMATSGEPMWLRSVETGREILNYDEYLKEFPQAQASSFPGRKTIEASRDAGIVF 352

Query: 221 LEPTKIAEILKDRPSW-------FRDCRSLEVFTM--FPAGNAGTIELLYTQAYAPTTLA 271
           ++  K+A+   D   W            +++V      P+   G I+L++ +    T + 
Sbjct: 353 MDAHKLAQSFMDVGQWKETFACLISKAATVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVV 412

Query: 272 PARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGG 331
           P R+ + +R    L      + + S+S   +  N    A  ++   LPSGC+I     G 
Sbjct: 413 PTREVYFVRSCRQLSPEKWAIVDVSVSVEDS--NTEKEASLLKCRKLPSGCIIEDTSNGH 470

Query: 332 SIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-------------------ETSG 372
           S +  V+HL++ A +V  + R L  +      R  +A                   + S 
Sbjct: 471 SKVTWVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSL 530

Query: 373 EVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTA 432
            V    GR+ +VL+  +QR+++ F  A+   +   W+ +T    +D  + V+S K+L   
Sbjct: 531 GVTTLAGRK-SVLK-MAQRMTQSFYRAIAASSYHQWTKITTKTGQD--MRVSSRKNLHDP 586

Query: 433 SNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAY--SAASLKA 488
             PT      G I+CA +S+ L  V PALL  F R+   R EW   +  A+  S A+L  
Sbjct: 587 GEPT------GVIVCASSSLWLP-VSPALLFDFFRDEARRHEWDALSNGAHVQSIANLSK 639

Query: 489 GSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICS 548
           G          +  G+ + +    T++  E   +  L+  S    ++ V        + +
Sbjct: 640 G----------QDRGNSVAI---QTVKSRE-KSIWVLQDSSTNSYESVV--------VYA 677

Query: 549 GVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIP 585
            VD N     ++LV A  D   P +  +LPSGF IIP
Sbjct: 678 PVDINT----TQLVLAGHD---PSNIQILPSGFSIIP 707


>gi|60099373|dbj|BAD89977.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 633

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 226/523 (43%), Gaps = 85/523 (16%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           ++G+   ++    KY R+T +Q+  +E ++ E P P   +RQQL ++      + P+Q+K
Sbjct: 89  AAGNKGTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVK 144

Query: 76  VWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEEN--------------DRLQKQ 118
            WFQNRR + K   +R E S L+    KL   NK + E                D L  +
Sbjct: 145 FWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGPDDLHLE 204

Query: 119 VSQLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSK 178
            S+L  E   ++  L   P    ASC       +H L   +   G+ ++ +  +AE  ++
Sbjct: 205 NSKLKAELDKLRAALGRTPYPLQASCSD---DQEHRLGSLDFYTGVFALEKSRIAEISNR 261

Query: 179 AT------GTAVDWVQMPGMKPGPDSVGI------FAISQSCSG------VAARACGLVS 220
           AT       T+ + + +  ++ G + +        F  +Q+ S        A+R  G+V 
Sbjct: 262 ATLELQKMATSGEPMWLRSVETGREILNYDEYLKEFPQAQASSFPGRKTIEASRDAGIVF 321

Query: 221 LEPTKIAEILKDRPSW-------FRDCRSLEVFTM--FPAGNAGTIELLYTQAYAPTTLA 271
           ++  K+A+   D   W            +++V      P+   G I+L++ +    T + 
Sbjct: 322 MDAHKLAQSFMDVGQWKETFACLISKAATVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVV 381

Query: 272 PARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGG 331
           P R+ + +R    L      + + S+S   +  N    A  ++   LPSGC+I     G 
Sbjct: 382 PTREVYFVRSCRQLSPEKWAIVDVSVSVEDS--NTEKEASLLKCRKLPSGCIIEDTSNGH 439

Query: 332 SIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-------------------ETSG 372
           S +  V+HL++ A +V  + R L  +      R  +A                   + S 
Sbjct: 440 SKVTWVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSL 499

Query: 373 EVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTA 432
            V    GR+ +VL+  +QR+++ F  A+   +   W+ +T    +D  + V+S K+L   
Sbjct: 500 GVTTLAGRK-SVLK-MAQRMTQSFYRAIAASSYHQWTKITTKTGQD--MRVSSRKNLHDP 555

Query: 433 SNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
             PT      G I+CA +S+ L  V PALL  F R+   R EW
Sbjct: 556 GEPT------GVIVCASSSLWLP-VSPALLFDFFRDEARRHEW 591


>gi|212721972|ref|NP_001131245.1| uncharacterized protein LOC100192557 [Zea mays]
 gi|194690982|gb|ACF79575.1| unknown [Zea mays]
          Length = 185

 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 57/87 (65%), Positives = 69/87 (79%)

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELL 710
           MARQYVR+V++SVQRVAMAI PS +   L  K +PGSPEA TLA WI +SY +H GAELL
Sbjct: 1   MARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELL 60

Query: 711 RSDSVGGDSVLKNLWQHSDAILCCSLK 737
           R+D+   D+ LK LWQHSD+I+CCSLK
Sbjct: 61  RTDTQCTDASLKALWQHSDSIMCCSLK 87


>gi|10998865|gb|AAG26011.1|AC022354_8 HD-zip-like protein, 3' partial [Arabidopsis thaliana]
          Length = 69

 Score =  117 bits (293), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/57 (91%), Positives = 55/57 (96%)

Query: 25 LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
          LDNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 13 LDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 69


>gi|397134751|gb|AFO11041.1| HD-1A [Gossypium hirsutum]
          Length = 725

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 167/747 (22%), Positives = 293/747 (39%), Gaps = 193/747 (25%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K   
Sbjct: 61  YHRHTQRQIQEMEAFFKECPHPDDKQRKELGREL----GLEPLQVKFWFQNKRTQMKAQH 116

Query: 87  QRKEASRLQTVNRKLTAMN----------------------------KLLMEENDRLQKQ 118
           +R E + L+  N KL A N                            +LL  EN RL+++
Sbjct: 117 ERHENAILKAENEKLRAENNRYKEALSNATCPSCGGPAALGEMSFDEQLLRIENARLREE 176

Query: 119 VSQLV-CENGYMKQQLRTAP--------------ATTDASCDSVVTTPQHS---LRDANN 160
           + ++      Y+ + L + P              A+   +    V     S   LR  + 
Sbjct: 177 IDRISGIAAKYVGKPLSSLPHLSSHLHSRSVDLGASNFGTQSGFVGEMDRSGDLLRSVSG 236

Query: 161 PAG-----LLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCS----GV 211
           P       ++ +A   + E +  A      WV      PG +S+ + +  +       G+
Sbjct: 237 PTEADKPMIVELAVAAMEELIRMAQSGEPLWV------PGDNSIDVLSEDEYLRTFPRGI 290

Query: 212 ----------AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN- 253
                     A+R   +V +    + EIL D   W            +LEV +   AGN 
Sbjct: 291 GPKPLGLRSEASRESAVVIMNHVNLVEILMDVNQWSSVFCGIVSRAMTLEVLSTGVAGNY 350

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            G ++++  +   P+ L P R+ + +RY     +G+  V + SL      PNP S     
Sbjct: 351 NGALQVMTAEFQVPSPLVPTRENYFVRYCKQHIDGTWAVVDVSLDN--LRPNPMS----- 403

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGE 373
           +    PSGCLI+    G S +  V+H+ ++  ++  + RP+  S      +  +A    +
Sbjct: 404 KCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRAIHNIYRPVVNSGLAFGAKRWVATLDRQ 463

Query: 374 ------------------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDG 415
                             V+  L  + ++L+  ++R+   F   V       W+ ++  G
Sbjct: 464 CERLASSMASNIPAGDLCVITSLEGRKSMLK-LAERMVTSFCTGVGASTAHAWTSLSATG 522

Query: 416 AEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           ++DV   V + KS+     P        GI+ + A+     VPP  +  FLR+   RSEW
Sbjct: 523 SDDV--RVMTRKSMDDPGRPP-------GIVLSAATSFWIPVPPKRVFDFLRDENSRSEW 573

Query: 474 ADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQE 533
                D  S   L                  Q +  + +  +    + ++R+   + +Q 
Sbjct: 574 -----DILSNGGL-----------------VQEMAHIANGRDPGNCVSLLRVNSANSSQS 611

Query: 534 DAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRII 584
           +  +     L + C+    +A G  S +++AP+D +          PD   LLPSGF I+
Sbjct: 612 NMLI-----LQESCT----DATG--SYVIYAPVDIVAMNVVLSGGDPDYLALLPSGFAIL 660

Query: 585 PLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNL 644
                 PD P        ++    LE+G                 S+LT+AFQ   +S  
Sbjct: 661 ------PDGP-------GVNGGGILEIGSGG--------------SLLTVAFQILVDSVP 693

Query: 645 QDNVATMARQYVRSVIS-SVQRVAMAI 670
              ++  +   V S+I  +V+R+  A+
Sbjct: 694 TAKLSLGSVTTVNSLIKCTVERIKAAV 720


>gi|109729922|tpg|DAA05775.1| TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens]
          Length = 799

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 182/786 (23%), Positives = 299/786 (38%), Gaps = 193/786 (24%)

Query: 6   QQQQQQQRESSSGSIN------KHQLDNG-----KYVRYTAEQVEALERVYSECPKPSSL 54
           QQ+ +++ ES SGS N          DN      +Y R+T  Q++ +E ++ ECP P   
Sbjct: 81  QQKNKEEYESRSGSDNMEGGSGDEDPDNNHPRKKRYHRHTPRQIQEMEMLFKECPHPDDK 140

Query: 55  RRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLME- 110
           +RQQL R+      +EP+Q+K WFQNRR + K   +R E S L++ N KL + N ++ E 
Sbjct: 141 QRQQLSRDL----GLEPRQVKFWFQNRRTQMKAQTERAENSMLRSENEKLRSENLIMREA 196

Query: 111 ---------------------------ENDRLQKQVSQ---------------------- 121
                                      EN RL++++ +                      
Sbjct: 197 LKNPQCPHCGGPATVGEMTFDEQQLRIENVRLKEELDRVSALAAKYLGRPITPMAPLALP 256

Query: 122 -----LVCENGYMKQQLRTAPATTDA----SCDSVVTTPQHSLRDANNPAGLLSIAEETL 172
                L    G     +  AP   D     S   V T P   L +A  P  ++ +A   +
Sbjct: 257 SSSLDLQVGGGSSFGGMHPAPGNLDVVAGPSVADVATRP-GGLTEAEKPM-VVELAVTAM 314

Query: 173 AEFLSKATGTAVDWVQMPG-----------MKPGPDSVGIFAISQSCSGVAARACGLVSL 221
            E +  A      WV M             M+  P  +G+          A R   LV +
Sbjct: 315 EELVRMAQTEEPLWVNMGEVGKEQLNYEEYMRQFPRGIGMCPPGLKTE--ATRETALVMM 372

Query: 222 EPTKIAEILKDRPSWF-------RDCRSLEVFTMFPAGNA-GTIELLYTQAYAPTTLAPA 273
               + E L D   W            +++V      GN  G ++L+Y +    + L P 
Sbjct: 373 NGVNLVETLMDATQWMDMFPCIVSRALTVDVLATGVTGNRNGALQLMYAELQVLSPLVPT 432

Query: 274 RDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSI 333
           R+ + LRY      G   V + S+      P P+     +R    PSG LI+    G + 
Sbjct: 433 REIYFLRYCKQHAEGVWAVVDVSVDSLRDNPPPS----LMRCRRRPSGVLIQDTPNGYAK 488

Query: 334 IHIVDHLNLEAWSVPEVLRPLYESSKVVA------------QRMTIAETSGEVVYGLGRQ 381
           +  V+H+  +  +V  + R L  +                 +R+     S      LG  
Sbjct: 489 VTCVEHMEYDDRAVHRMYRDLVNTGMAFGAQRWLATLQRQCERLASLLASNIASRDLGGV 548

Query: 382 PAV-----LRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPT 436
           P+      +   +QR++  F   V+      W+ ++  G +DV   V + KS+     P 
Sbjct: 549 PSASGRRSMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGDDDV--RVMTRKSVDNPGEPH 606

Query: 437 NSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSAASLKAGSYAYP 494
                 G +L A  SM L  V PA + +FLR+   RSEW   +    +   +   ++   
Sbjct: 607 ------GIVLSAATSMWLP-VSPARVFQFLRDERLRSEWDILS----NGGMVTEMAHIAK 655

Query: 495 GMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENA 554
           G  P            G+++       ++R+   + +Q +  +     L + C+ V    
Sbjct: 656 GQDP------------GNSV------SLLRVNAMNSSQSNMLI-----LQESCTDV---- 688

Query: 555 VGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLDSKTPDTPDTLTAHRTLDL 605
             + S +++AP+D     +    G      LLPSGF I+P D    D    L   +   L
Sbjct: 689 --SGSLVIYAPVDIPAMNLVLQGGDPAYVALLPSGFAILP-DGPGGDR-GALGNEQGGQL 744

Query: 606 TSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS-SVQ 664
           T   E+G  T              S+LT+AFQ    S     ++  +   V ++IS +VQ
Sbjct: 745 T---EIGRGTG-------------SLLTVAFQILVSSIPSARLSLESVATVNNLISCTVQ 788

Query: 665 RVAMAI 670
           R+  A+
Sbjct: 789 RIRSAL 794


>gi|326525997|dbj|BAJ93175.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 777

 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 155/655 (23%), Positives = 253/655 (38%), Gaps = 163/655 (24%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 118 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 173

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME----------------------------ENDRLQK 117
            +R E S+L+  N KL A N    E                            EN RL+ 
Sbjct: 174 HERHENSQLRADNDKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRVENARLRD 233

Query: 118 QVSQL-VCENGYMKQQLRTAP-------ATTDASCDSVVTTPQHSLR---DANNPAGLLS 166
           ++ ++      Y+ + +   P       A   AS   V       L+   D      ++ 
Sbjct: 234 EIDRISAIAAKYVGKPMVPFPVLSSPLAAAPGASAYDVFAGAASVLQAPPDDKQQGVVVE 293

Query: 167 IAEETLAEFLSKAT------GTAVD---------WVQM---PGMKPGPDSVGIFAISQSC 208
           +A   + E L  A        T VD         + +M   P    GP   G+       
Sbjct: 294 LAVAAMEELLRMARLDDPLWATTVDQTLALDEEEYARMFIDPRGGLGPKQYGLVP----- 348

Query: 209 SGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAG-NAGTIELL 260
              A+R   +V + P  + EIL D   +            +LEV +   AG   G ++++
Sbjct: 349 --EASRDATVVIMTPASLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGCYDGALQVM 406

Query: 261 YTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPS 320
             +   P+ L P R+ + +RY     +G+  V + SL G           Q V+    PS
Sbjct: 407 SVEFQVPSPLVPTRESYFVRYCKRNADGAWAVVDVSLDG----------LQGVKCRRRPS 456

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA------------QRMTIA 368
           GCLI+    G S +  V+H+ ++  SV  + +PL  S                 +R+  A
Sbjct: 457 GCLIQEAPNGYSKVTWVEHVEVDDRSVHNIYKPLVGSGLAFGARRWVGVLGRQCERLASA 516

Query: 369 ETS-------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVII 421
             S       G +    GR+   +   ++R+   F   V       W+ ++  GAEDV  
Sbjct: 517 MASNIPTSDIGVITSSEGRKS--MLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDV-- 572

Query: 422 AVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVD 479
            V + KS+     P        GI+   A+     VPP  +  FLR+   RSEW     D
Sbjct: 573 RVMTRKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFDFLRDETSRSEW-----D 620

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
             S   +                  Q +  + +  +H   + ++R+   +  Q +  +  
Sbjct: 621 ILSNGGI-----------------VQEMAHIANGRDHGNCVSLLRVNSTNSNQSNMLI-- 661

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
              L + C+    +A G  S +++AP+D +          PD   LLPSGF I+P
Sbjct: 662 ---LQESCT----DASG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 707


>gi|194696754|gb|ACF82461.1| unknown [Zea mays]
          Length = 83

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 53/69 (76%), Positives = 59/69 (85%), Gaps = 1/69 (1%)

Query: 15 SSSGSINK-HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
          S SG  +K   +D+GKYVRYT EQVE LER+Y +CPKPSS RRQQL+RECPILSNIEPKQ
Sbjct: 15 SDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQ 74

Query: 74 IKVWFQNRR 82
          IKVWFQNRR
Sbjct: 75 IKVWFQNRR 83


>gi|356556218|ref|XP_003546423.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 747

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 125/528 (23%), Positives = 213/528 (40%), Gaps = 115/528 (21%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+TA+Q++ +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 97  YHRHTADQIKEMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 152

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDR----------------LQKQVSQLVCENGYMK 130
           +R E S L++   KL   NK L E  ++                +  +  QL  EN  +K
Sbjct: 153 ERHENSLLKSEIEKLKEKNKTLRETINKACCPNCGVPTTSRDGAMPTEEQQLRIENAKLK 212

Query: 131 QQL--------RTAPATTDASCDSVVTTPQHSLRD------ANNPAGLLSIAEETLAEFL 176
            ++        + AP +T  SC S       S  D        + + ++    + + E +
Sbjct: 213 AEVEKLRAVLGKYAPGSTSPSCSSGHDQENRSSLDFYTGIFGLDKSRIMDTVNQAMEELI 272

Query: 177 SKATGTAVDWVQMPGMKPG------PDSVGIFAISQSCSGV------AARACGLVSLEPT 224
             AT     W++    + G       + V  FA+  S SG       A+R   +V ++  
Sbjct: 273 KMATVGEPLWLR--SFETGREILNYDEYVREFAVENSSSGKPRRSIEASRDTAVVFVDLP 330

Query: 225 KIAEILKDRPSWFRDCRSLEVFTMFPA-----------------GNAGTIELLYTQAYAP 267
           ++ +   D   W           MFP                  G  G ++L++ +    
Sbjct: 331 RLVQSFLDVNQWKE---------MFPCLISKAATVDVICNGEGPGRNGAVQLMFAELQML 381

Query: 268 TTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPC 327
           T + P R+ + +R+   L      + + S+       +    A  V+    PSGC+I   
Sbjct: 382 TPMVPTREVYFVRFCKQLSAEQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIEDK 437

Query: 328 DGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------------------- 368
             G   +  V+HL  +  +V  + R +  S      R  IA                   
Sbjct: 438 SNGHCKVIWVEHLECQKSAVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPM 497

Query: 369 -ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
            +++G  V  L  + ++L+  +QR++  F  A+   +   W+  T    ED  I ++S K
Sbjct: 498 KDSTG--VATLAGRKSILK-LAQRMTWSFCHAIGASSFHTWTKFTSKTGED--IRISSRK 552

Query: 428 SLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           +L+    P      LG ILCA  S+ L  V P +L  FLR+   R+EW
Sbjct: 553 NLNDPGEP------LGLILCAVCSVWLP-VSPNVLFDFLRDETRRTEW 593


>gi|397134753|gb|AFO11042.1| HD-1D [Gossypium hirsutum]
          Length = 725

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 172/746 (23%), Positives = 291/746 (39%), Gaps = 189/746 (25%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 60  RYHRHTQRQIQEMEAFFKECPHPDDKQRKELGREL----GLEPLQVKFWFQNKRTQMKAQ 115

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC----------ENGYMKQQLRTAPA 138
            E       N  L A N+ L  EN+R ++ +S   C          E  + +Q LR   A
Sbjct: 116 HERHE----NAILKAENEKLRAENNRYKEALSNATCPSCGGPAALGEMSFDEQHLRIENA 171

Query: 139 TTDASCDSV-------VTTPQHSL---------RDAN-------NPAG-----------L 164
                 D +       V  P  SL         R A+       N +G           L
Sbjct: 172 RLREEIDRISGIAAKYVGKPLSSLPHLSSHLHSRSADLGASNFGNQSGFVGEMDRSGDLL 231

Query: 165 LSIAEETLAE---FLSKATGTAVDWVQM-----PGMKPGPDSVGIF-----------AIS 205
            S++  T A+    +  A     + ++M     P   PG +S  +             I 
Sbjct: 232 RSVSGPTEADKPMIVELAVAAMEELIRMAQSGEPLWVPGDNSTDVLNEDEYLRTFPRGIG 291

Query: 206 QSCSGV---AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA- 254
               G+   A+R   +V +    + EIL D   W            +LEV +   AG   
Sbjct: 292 PKPLGLRSEASRESAVVIMNHVNLVEILMDVNQWSSVFCGIVSRAMTLEVLSTGVAGKCN 351

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           G ++++  +   P+ L P R+ +  RY     +G+  V + SL      PNP S     +
Sbjct: 352 GALQVMTAEFQVPSPLVPTRENYFARYCKQHIDGTWAVVDVSLDN--LRPNPMS-----K 404

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGE- 373
               PSGCLI+    G S +  V+H+ ++  +V  + RP+  S      +  +A    + 
Sbjct: 405 CRRRPSGCLIQELPNGYSKVIWVEHVEVDDRAVHNIYRPVVNSGLAFGAKRWVATLDRQC 464

Query: 374 -----------------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGA 416
                            V+     + ++L+  ++R+   F   V       W+ ++  G+
Sbjct: 465 ERLASSMASNIPAGDLCVITSPEGRKSMLK-LAERMVTSFCTGVGASTAHAWTTLSATGS 523

Query: 417 EDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWA 474
           +DV   V + KS+     P       G +L A  S  +Q VPP  +  FLR+   RSEW 
Sbjct: 524 DDV--RVMTRKSMDDPGRPP------GIVLSAATSFWIQ-VPPKRVFDFLRDENSRSEW- 573

Query: 475 DFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQED 534
               D  S   L                  Q +  + +  +    + ++R+   + +Q +
Sbjct: 574 ----DILSNGGL-----------------VQEMAHIANGRDPGNCVSLLRVNSANSSQSN 612

Query: 535 AFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
             +     L + C+    +A G  S +++AP++ +          PD   LLPSGF I+ 
Sbjct: 613 MLI-----LQESCT----DAKG--SYVIYAPVNIVAMNIVLSGGDPDYVALLPSGFAIL- 660

Query: 586 LDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQ 645
                PD P        ++    LE+G                 S+LT+AFQ   +S   
Sbjct: 661 -----PDGP-------GVNGGGILEIGSGG--------------SLLTVAFQILVDSVPT 694

Query: 646 DNVATMARQYVRSVIS-SVQRVAMAI 670
             ++  +   V S+I  +V+R+  A+
Sbjct: 695 AKLSLGSVATVNSLIKCTVERIKAAV 720


>gi|1173622|gb|AAB37230.1| homeobox protein [Phalaenopsis sp. SM9108]
          Length = 768

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 151/664 (22%), Positives = 247/664 (37%), Gaps = 163/664 (24%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R+ L +E      +EP Q+K WFQN+R + K +
Sbjct: 92  RYHRHTQHQIQEMEAFFKECPHPDDKQRKALSKEL----GLEPLQVKFWFQNKRTQMKTQ 147

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN----------GYMKQQLRTAPA 138
            +       N +L A N  L  EN R ++ +S   C N           + +  LR   A
Sbjct: 148 HDRQE----NSQLRAENDKLRNENLRYKEALSNASCPNCGGPATLGEMSFDEHHLRIENA 203

Query: 139 TTDASCDSV-------VTTPQHSL----------------------------RDANNPAG 163
                 D +       V  P +S                              D  +PA 
Sbjct: 204 RLREEIDRISGIAAKYVGKPMNSYPLLSPTLPSRSSLDLGVGGFGLHSPTMGGDMFSPAE 263

Query: 164 LL---------------SIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSV--------- 199
           LL                +A   + E +  A      W   PG+  G + +         
Sbjct: 264 LLRSVAGQPEVDKPMVIELAVAAMEELIRMAQLGEPLWTSSPGLDGGNEILNEEEYVQNF 323

Query: 200 --GIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFP 250
             GI          A+R   +V +    + EIL D   W            +LEV +   
Sbjct: 324 PRGIGPKPFGLKSEASRETAVVIMSHVNLVEILMDANQWSTMFSGIVSRGMTLEVLSTGV 383

Query: 251 AGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA 309
           AGN  G ++++  +   P+ L P R+ + +RY     +G+  V + SL        P+S 
Sbjct: 384 AGNYNGALQVMTAEFQVPSPLVPTRESYFVRYCKQHPDGTWAVVDVSLDSL----RPSSL 439

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS----------- 358
              +R    PSGCLI+    G S +  V+H  ++  SV  + +PL  S            
Sbjct: 440 --MMRCRRRPSGCLIQEMPNGYSKVIWVEHFEVDDRSVHSIYKPLVNSGIAFGAKRWVST 497

Query: 359 -----KVVAQRMTIAETSGEV-VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMT 412
                + +A  M  +  SGE+ V         +   ++R+   F   V+      W+ ++
Sbjct: 498 LDRQCERLASVMASSIPSGEIGVITTSEGRKSMLKLAERMVLSFCGGVSASTTHQWTTLS 557

Query: 413 CDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--R 470
             GAEDV   V + KS+     P        GI+   A+     V P  +  FLR+   R
Sbjct: 558 GSGAEDV--RVMTRKSVDDPGRPP-------GIVLNAATSFWLPVSPKRVFDFLRDESSR 608

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 530
           SEW     D  S   +                  Q +  + +  +H   + ++R+   + 
Sbjct: 609 SEW-----DILSNGGV-----------------VQEMAHIANGRDHGNCVSLLRVNSTNS 646

Query: 531 AQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGF 581
            Q +  +     L + C+    +  G  S +++AP+D +          PD   LLPSGF
Sbjct: 647 NQSNMLI-----LQESCT----DPTG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGF 695

Query: 582 RIIP 585
            I+P
Sbjct: 696 AILP 699


>gi|302794502|ref|XP_002979015.1| hypothetical protein SELMODRAFT_450554 [Selaginella moellendorffii]
 gi|300153333|gb|EFJ19972.1| hypothetical protein SELMODRAFT_450554 [Selaginella moellendorffii]
          Length = 786

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 136/577 (23%), Positives = 226/577 (39%), Gaps = 133/577 (23%)

Query: 7   QQQQQQRESSSGSIN-----KHQLDN-----GKYVRYTAEQVEALERVYSECPKPSSLRR 56
           + + ++ ES SGS N         DN      +Y R+T  Q++ +E ++ ECP P   +R
Sbjct: 75  KNKDEEYESRSGSDNMDGSGGEDQDNEPPRKKRYHRHTPHQIQEMEALFKECPHPDDKQR 134

Query: 57  QQLIRECPILSNIEPKQIKVWFQNRRCR---EKQRKEASRLQTVNRKLTAMNKLLME--E 111
           Q+L RE      +EP+Q+K WFQNRR +   +++R E S L+    KL A N  + E  +
Sbjct: 135 QELSREL----GLEPRQVKFWFQNRRTQLKAQQERAENSMLRLEIEKLRAENVTMREAIK 190

Query: 112 N------------DRLQKQVSQLVCENGYMKQQL----------------------RTAP 137
           N              +     QL  EN  +K +L                        AP
Sbjct: 191 NASCPSCGGPATLGEMSYDEQQLRIENARLKDELDRVSTLAAKYLGRPIPHLSGGGSQAP 250

Query: 138 ATT---------------DASCDSVVTTPQHSLR-----DANNPAGLLSIAEETLAEFLS 177
           +++                A+  S+V+    S+R     +A+ P  ++ +A   + E   
Sbjct: 251 SSSLDLAVGGAANFHQGGAAAAGSLVSAGSESMRPGGLSEADKPM-IVDLAVTAMEELYR 309

Query: 178 KATGTAVDWVQMPGMKPGPDSVGIF--AISQSCSGVAARACG----------LVSLEPTK 225
                   W+  P    GP  V  +   I Q  S +  R  G          LV +    
Sbjct: 310 LCQPEEPSWIPSPD---GPKEVLNYDEYIRQYQSALGPRPYGMRTEATRESDLVMMNGVN 366

Query: 226 IAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFW 277
           + E+L D   W            +++V      GN  G ++L+Y +    + L P R+F+
Sbjct: 367 LVELLMDSAKWAEIFPSIVSRAVTIDVLATGVTGNRNGAVQLMYAEMQVLSPLVPTREFY 426

Query: 278 TLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIV 337
            +RY     +G   + + S+        P+S     R    PSG LI+    G S + ++
Sbjct: 427 FVRYCKQHADGVWGIVDVSVDALAREAAPSSN----RCRRRPSGYLIQDMPNGYSKVTVL 482

Query: 338 DHLNLEAWSVPEVLRPLYESSKVV-AQRMTI------------------AETSGEVVYGL 378
           +H+  +  SV  + +P   S     AQR  +                  A   G +    
Sbjct: 483 EHVEYDDRSVNRIYKPYVNSGLAFGAQRWLLTLQRQCERLASLLATSISARDLGVIPNAS 542

Query: 379 GRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNS 438
           GR+  +    +QR++  F   V+      W+ ++  G +DV   V + KS+     P   
Sbjct: 543 GRRSML--KLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDV--RVMTRKSVDNPGEPH-- 596

Query: 439 LAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
                GI+ + A+ L   VPP  +  FLR+   R+EW
Sbjct: 597 -----GIVLSAATSLWLPVPPKRVFEFLRDERLRNEW 628


>gi|302813433|ref|XP_002988402.1| hypothetical protein SELMODRAFT_450553 [Selaginella moellendorffii]
 gi|300143804|gb|EFJ10492.1| hypothetical protein SELMODRAFT_450553 [Selaginella moellendorffii]
          Length = 817

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 136/577 (23%), Positives = 226/577 (39%), Gaps = 133/577 (23%)

Query: 7   QQQQQQRESSSGSIN-----KHQLDN-----GKYVRYTAEQVEALERVYSECPKPSSLRR 56
           + + ++ ES SGS N         DN      +Y R+T  Q++ +E ++ ECP P   +R
Sbjct: 106 KNKDEEYESRSGSDNMDGSGGEDQDNEPPRKKRYHRHTPHQIQEMEALFKECPHPDDKQR 165

Query: 57  QQLIRECPILSNIEPKQIKVWFQNRRCR---EKQRKEASRLQTVNRKLTAMNKLLME--E 111
           Q+L RE      +EP+Q+K WFQNRR +   +++R E S L+    KL A N  + E  +
Sbjct: 166 QELSREL----GLEPRQVKFWFQNRRTQLKAQQERAENSMLRLEIEKLRAENVTMREAIK 221

Query: 112 N------------DRLQKQVSQLVCENGYMKQQL----------------------RTAP 137
           N              +     QL  EN  +K +L                        AP
Sbjct: 222 NASCPSCGGPATLGEMSYDEQQLRIENARLKDELDRVSTLAAKYLGRPIPHLSGGGSQAP 281

Query: 138 ATT---------------DASCDSVVTTPQHSLR-----DANNPAGLLSIAEETLAEFLS 177
           +++                A+  S+V+    S+R     +A+ P  ++ +A   + E   
Sbjct: 282 SSSLDLAVGGAANFHQGGAAAAGSLVSAGSESMRPGGLSEADKPM-IVDLAVTAMEELYR 340

Query: 178 KATGTAVDWVQMPGMKPGPDSVGIF--AISQSCSGVAARACG----------LVSLEPTK 225
                   W+  P    GP  V  +   I Q  S +  R  G          LV +    
Sbjct: 341 LCQPEEPSWIPSPD---GPKEVLNYDEYIRQYQSALGPRPYGMRTEATRESDLVMMNGVN 397

Query: 226 IAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFW 277
           + E+L D   W            +++V      GN  G ++L+Y +    + L P R+F+
Sbjct: 398 LVELLMDSAKWAEIFPSIVSRAVTIDVLATGVTGNRNGAVQLMYAEMQVLSPLVPTREFY 457

Query: 278 TLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIV 337
            +RY     +G   + + S+        P+S     R    PSG LI+    G S + ++
Sbjct: 458 FVRYCKQHADGVWGIVDVSVDALAREAAPSSN----RCRRRPSGYLIQDMPNGYSKVTVL 513

Query: 338 DHLNLEAWSVPEVLRPLYESSKVV-AQRMTI------------------AETSGEVVYGL 378
           +H+  +  SV  + +P   S     AQR  +                  A   G +    
Sbjct: 514 EHVEYDDRSVNRIYKPYVNSGLAFGAQRWLLTLQRQCERLASLLATSISARDLGVIPNAS 573

Query: 379 GRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNS 438
           GR+  +    +QR++  F   V+      W+ ++  G +DV   V + KS+     P   
Sbjct: 574 GRRSML--KLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDV--RVMTRKSVDNPGEPH-- 627

Query: 439 LAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
                GI+ + A+ L   VPP  +  FLR+   R+EW
Sbjct: 628 -----GIVLSAATSLWLPVPPKRVFEFLRDERLRNEW 659


>gi|109729920|tpg|DAA05774.1| TPA_inf: class IV HD-Zip protein HDZ44 [Selaginella moellendorffii]
          Length = 786

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 136/577 (23%), Positives = 226/577 (39%), Gaps = 133/577 (23%)

Query: 7   QQQQQQRESSSGSIN-----KHQLDN-----GKYVRYTAEQVEALERVYSECPKPSSLRR 56
           + + ++ ES SGS N         DN      +Y R+T  Q++ +E ++ ECP P   +R
Sbjct: 75  KNKDEEYESRSGSDNMDGSGGEDQDNEPPRKKRYHRHTPHQIQEMEALFKECPHPDDKQR 134

Query: 57  QQLIRECPILSNIEPKQIKVWFQNRRCR---EKQRKEASRLQTVNRKLTAMNKLLME--E 111
           Q+L RE      +EP+Q+K WFQNRR +   +++R E S L+    KL A N  + E  +
Sbjct: 135 QELSREL----GLEPRQVKFWFQNRRTQLKAQQERAENSMLRLEIEKLRAENVTMREAIK 190

Query: 112 N------------DRLQKQVSQLVCENGYMKQQL----------------------RTAP 137
           N              +     QL  EN  +K +L                        AP
Sbjct: 191 NASCPSCGGPATLGEMSYDEQQLRIENARLKDELDRVSTLAAKYLGRPIPHLSGGGSQAP 250

Query: 138 ATT---------------DASCDSVVTTPQHSLR-----DANNPAGLLSIAEETLAEFLS 177
           +++                A+  S+V+    S+R     +A+ P  ++ +A   + E   
Sbjct: 251 SSSLDLAVGGAANFHQGGAAAAGSLVSAGSESMRPGGLSEADKPM-IVDLAVTAMEELYR 309

Query: 178 KATGTAVDWVQMPGMKPGPDSVGIF--AISQSCSGVAARACG----------LVSLEPTK 225
                   W+  P    GP  V  +   I Q  S +  R  G          LV +    
Sbjct: 310 LCQPEEPSWIPSPD---GPKEVLNYDEYIRQYQSALGPRPYGMRTEATRESDLVMMNGVN 366

Query: 226 IAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFW 277
           + E+L D   W            +++V      GN  G ++L+Y +    + L P R+F+
Sbjct: 367 LVELLMDSAKWAEIFPSIVSRAVTIDVLATGVTGNRNGAVQLMYAEMQVLSPLVPTREFY 426

Query: 278 TLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIV 337
            +RY     +G   + + S+        P+S     R    PSG LI+    G S + ++
Sbjct: 427 FVRYCKQHADGVWGIVDVSVDALAREAAPSSN----RCRRRPSGYLIQDMPNGYSKVTVL 482

Query: 338 DHLNLEAWSVPEVLRPLYESSKVV-AQRMTI------------------AETSGEVVYGL 378
           +H+  +  SV  + +P   S     AQR  +                  A   G +    
Sbjct: 483 EHVEYDDRSVNRIYKPYVNSGLAFGAQRWLLTLQRQCERLASLLATSISARDLGVIPNAS 542

Query: 379 GRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNS 438
           GR+  +    +QR++  F   V+      W+ ++  G +DV   V + KS+     P   
Sbjct: 543 GRRSML--KLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDV--RVMTRKSVDNPGEPH-- 596

Query: 439 LAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
                GI+ + A+ L   VPP  +  FLR+   R+EW
Sbjct: 597 -----GIVLSAATSLWLPVPPKRVFEFLRDERLRNEW 628


>gi|449466649|ref|XP_004151038.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 777

 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 162/700 (23%), Positives = 278/700 (39%), Gaps = 145/700 (20%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           KY R+T EQ+  +E ++ E P P   +RQQL +       + P+Q+K WFQNRR + K  
Sbjct: 111 KYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRL----GLSPRQVKFWFQNRRTQIKAI 166

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME-----------------ENDRLQKQVSQLVCENGY 128
            +R E + L+    KL   NK + E                 ++D +     QL  +N  
Sbjct: 167 QERHENTLLKAEMEKLREENKAMREISKKKIGCPNCGTADATQDDLVFTTTEQLRIKNAK 226

Query: 129 MK---QQLRTAPATTDASCDSVVTTPQHSLRDANNP------AGLLSIAEETLAEFLSKA 179
           +K   ++LR A      +  S  T    + ++ +N        G+  +    + E + +A
Sbjct: 227 LKAEVEKLRAALGKYPQAAASPSTYSSGNEQETSNRICLDFYTGIFGLENSRIMEKVDEA 286

Query: 180 T------GTAVDWVQMPGMKPG------PDSVGIFAISQSCSGV---------AARACGL 218
                    A D + +  ++ G       + +  F  S + S           A+R   L
Sbjct: 287 VEELKTMAAAGDPLWVRSVETGREILNYDEYLKTFQFSNNNSNTRNCLKTHIEASRETAL 346

Query: 219 VSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAG--NAGTIELLYTQAYAPTT 269
           V +EP+++ +   D   W            +++V     A   N G ++L++ +    T 
Sbjct: 347 VFMEPSRLVQSFMDENQWKEMFPFMISKAATVDVICNGEAAKWNNGAVQLMFAEVQMLTP 406

Query: 270 LAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDG 329
           L P R+ + +R+   LD     + + S+          S    V+    PSGC+I+    
Sbjct: 407 LVPTREMYFIRHCKQLDAEQWAIVDVSIENVEDNNIDVS---LVKYRKRPSGCIIKDESN 463

Query: 330 GGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------------------E 369
           G   + +V+HL      V  + R +  +      R  +A                    +
Sbjct: 464 GHCKVTMVEHLECVKNKVHNLYRSIVNNGTAFGARHWMATLQLQCERSAFFMATNIPMKD 523

Query: 370 TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSL 429
           ++G  V  L  + + L+  +QR+S  F+ AV   +   W+ +     ED  I V S K+L
Sbjct: 524 STG--VSTLAGRKSTLK-LAQRMSCSFSQAVAASSYQTWTKVVGKSGED--IRVCSRKNL 578

Query: 430 STASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW-ADFNVD-AYSAAS 485
           S    P      +G ILCA +S+ L  + P LL  F R+   RS+W A F  D A + A+
Sbjct: 579 SDPGEP------IGVILCAVSSLWLP-LSPHLLFDFFRDESRRSQWDAMFGGDKAKTIAN 631

Query: 486 LKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV---SRDIH 542
           L  G              S  I  +G    +   + +  L+  S    ++ V     D+ 
Sbjct: 632 LAKGQDR---------GNSVTIQTIGSKENNNNNMWI--LQDSSTNSSESMVVYSGVDVT 680

Query: 543 LLQ-ICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIP--LDSKTP------DT 593
            +Q + SG D  +V                    +LPSGF I+P   DS+ P        
Sbjct: 681 SMQSVMSGCDSGSV-------------------TILPSGFSILPDGADSRPPLLITRRKD 721

Query: 594 PDTLTAHRTLDLTSSLEVGPATNPAAGDS-SSCHHTRSVL 632
             T   H    LT+++++   T+PAA  +  S  + +S++
Sbjct: 722 DKTCDTHGGALLTAAVQILTDTSPAAKPTLESVEYVKSII 761


>gi|213950359|gb|ACJ54444.1| GL2b [Brassica napus]
          Length = 750

 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 129/535 (24%), Positives = 221/535 (41%), Gaps = 94/535 (17%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T +Q+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 99  YHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 154

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEEN---------------------DRLQKQVSQLVCE 125
           +R E S L+    KL   NK + E                       D L  + ++L  E
Sbjct: 155 ERHENSLLKAELEKLREENKAMRESFSKANSSSCPNCGGGGGGGGSPDDLHLENTKLKAE 214

Query: 126 NGYMKQQLRTAPATTDASCDSVVTTPQH-SLRDANNPAGLLSIAEETLAEFLSKAT---- 180
              ++  L   P    ASC    +  QH  +       G+ ++ +  + E  ++AT    
Sbjct: 215 LDKLRAALGRTPYPLQASC----SDDQHRRVGSLELYTGVFALEKSRIVEIANRATLEVQ 270

Query: 181 --GTAVDWVQMPGMKPGPDSVGI------FAISQSCSG------VAARACGLVSLEPTKI 226
              T+ + + +  ++ G + +        F  +Q+ S        A+R  G+V ++  K+
Sbjct: 271 KMATSGEPLWLRSLETGREILNYDEYLKEFPQAQASSFHGRKTIEASRDVGIVFMDAHKL 330

Query: 227 AEILKDRPSW--FRDCRSLEVFTM-------FPAGNAGTIELLYTQAYAPTTLAPARDFW 277
           A+   D   W     C   +  T+        P+   G I+L++ +    T + P R+ +
Sbjct: 331 AQSFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVY 390

Query: 278 TLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIV 337
            +R    L     V+ + S+S      +       +R    PSGC+I     G S +  V
Sbjct: 391 FVRSCRQLSPEKWVIVDVSVSVEEDNNSTEKEGSLLRCRKRPSGCIIEDTSNGHSKVTWV 450

Query: 338 DHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-------------------ETSGEVVYGL 378
           +HL+L A +V  + R    +      R  +A                   + S  V    
Sbjct: 451 EHLDLSASTVQPLFRSFVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSLGVTTLA 510

Query: 379 GRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNS 438
           GR+ +VL+  +QR+++ F  A+   +   W+ +T    +D  + V+S K+L     PT  
Sbjct: 511 GRK-SVLK-MAQRMTQSFYRAIAASSYHQWNKITTKTGQD--MRVSSRKNLHDPGEPT-- 564

Query: 439 LAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAY--SAASLKAG 489
               G I+CA +S+ L  V P LL  F R+   R EW   +  A+  S  SL  G
Sbjct: 565 ----GVIVCASSSLWLP-VSPTLLFDFFRDETRRHEWDALSNGAHVQSIVSLSKG 614


>gi|163860158|gb|ABY41242.1| homeodomain protein HOX1 [Gossypium arboreum]
          Length = 753

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 125/518 (24%), Positives = 213/518 (41%), Gaps = 94/518 (18%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+TA+Q+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 101 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 156

Query: 87  QRKEASRLQTVNRKLTAMNKLLME----------------ENDRLQKQVSQLVCENGYMK 130
           +R E S L+    KL   NK + E                ++  +  +  QL  EN  +K
Sbjct: 157 ERHENSLLKQELEKLRDENKAMRETINKACCLNCGMATTAKDGSITAEEQQLRIENAKLK 216

Query: 131 ---QQLRTA------PATTDASCDSVVTTPQHSLRD------ANNPAGLLSIAEETLAEF 175
              ++LRT        A+T  SC S       S  D          + ++ I  + + E 
Sbjct: 217 AEVEKLRTVIGKYPPGASTTGSCSSGNDQENRSSLDFYTGIFGLEKSRIMEIVNQAMEEL 276

Query: 176 LSKATGTAVDWVQMPGMKPG------PDSVGIFAISQSCSG------VAARACGLVSLEP 223
              AT     WV+   ++ G       + V  F++  S +G       A+R  G+V L+ 
Sbjct: 277 QKMATAGEPLWVR--SVETGREILNYDEYVKEFSVESSSNGRPKRSIEASRETGVVFLDL 334

Query: 224 TKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQAYAPTTLAPARD 275
            ++ +   D   W            +++V     A N  G ++L++ +    T L P R+
Sbjct: 335 PRLVQSFMDANQWKEMFPCIISKAATVDVICHGEAPNKNGAVQLMFAELQMLTPLVPTRE 394

Query: 276 FWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIH 335
            + +RY   L      + + S+       +    A  V+    PSGC+I+    G   + 
Sbjct: 395 VYFVRYCKQLSAEQWAIVDVSIDKVEENID----ASLVKCRKRPSGCIIQDTTNGHCKVI 450

Query: 336 IVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEV------------------VYG 377
            V+H   +  +V  + R +  S      R  +A    +                   V  
Sbjct: 451 WVEHXECQKNTVHTLYRTIVRSGLAFGARHWMATLQHQCEGLFFFMATNVPTKDSTGVAT 510

Query: 378 LGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTN 437
           L  + ++L+  +QR++  F  ++   +   W+ ++    EDV   V+S K+L+    P  
Sbjct: 511 LAGRKSILK-LAQRMTWSFCHSIGASSYHTWNKVSTKTGEDV--RVSSRKNLNDPGEPH- 566

Query: 438 SLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
                G I+CA +S+ L  V P LL  FLR+   RSEW
Sbjct: 567 -----GVIVCAVSSVCLP-VSPTLLFDFLRDESRRSEW 598


>gi|213950363|gb|ACJ54446.1| GL2a [Brassica oleracea]
          Length = 750

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 129/535 (24%), Positives = 221/535 (41%), Gaps = 94/535 (17%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T +Q+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 99  YHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 154

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEEN---------------------DRLQKQVSQLVCE 125
           +R E S L+    KL   NK + E                       D L  + ++L  E
Sbjct: 155 ERHENSLLKAELEKLREENKAMRESFSKANSSSCPNCGGGGGGGGSPDDLHLENTKLKAE 214

Query: 126 NGYMKQQLRTAPATTDASCDSVVTTPQH-SLRDANNPAGLLSIAEETLAEFLSKAT---- 180
              ++  L   P    ASC    +  QH  +       G+ ++ +  + E  ++AT    
Sbjct: 215 LDKLRAALGRTPYPLQASC----SDDQHRRVGSLELYTGVFALEKSRIVEIANRATLEVQ 270

Query: 181 --GTAVDWVQMPGMKPGPDSVGI------FAISQSCSG------VAARACGLVSLEPTKI 226
              T+ + + +  ++ G + +        F  +Q+ S        A+R  G+V ++  K+
Sbjct: 271 KMATSGEPLWLRSLETGREILNYDEYLKEFPQAQASSFHGRKTIEASRDVGIVFMDAHKL 330

Query: 227 AEILKDRPSW--FRDCRSLEVFTM-------FPAGNAGTIELLYTQAYAPTTLAPARDFW 277
           A+   D   W     C   +  T+        P+   G I+L++ +    T + P R+ +
Sbjct: 331 AQSFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVY 390

Query: 278 TLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIV 337
            +R    L     V+ + S+S      +       +R    PSGC+I     G S +  V
Sbjct: 391 FVRSCRQLSPEKWVIVDVSVSVEEDNNSTEKEGSLLRCRKRPSGCIIEDTSNGHSKVTWV 450

Query: 338 DHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-------------------ETSGEVVYGL 378
           +HL+L A +V  + R    +      R  +A                   + S  V    
Sbjct: 451 EHLDLSASTVQPLFRSFVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSLGVTTLA 510

Query: 379 GRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNS 438
           GR+ +VL+  +QR+++ F  A+   +   W+ +T    +D  + V+S K+L     PT  
Sbjct: 511 GRK-SVLK-MAQRMTQSFYRAIAASSYHQWNKITTKTGQD--MRVSSRKNLHDPGEPT-- 564

Query: 439 LAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAY--SAASLKAG 489
               G I+CA +S+ L  V P LL  F R+   R EW   +  A+  S  SL  G
Sbjct: 565 ----GVIVCASSSLWLP-VSPTLLFDFFRDETRRHEWDALSNGAHVQSIVSLSKG 614


>gi|13346176|gb|AAK19610.1|AF336277_1 BNLGHi8377 [Gossypium hirsutum]
          Length = 758

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 218/518 (42%), Gaps = 94/518 (18%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+TA+Q+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 106 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 161

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDR----------------LQKQVSQLVCENGYMK 130
           +R E S L+    KL   NK + E  ++                +  +  QL  EN  +K
Sbjct: 162 ERHENSLLKQELDKLRDENKAMRETINKACCLNCGMATTAKDGFITAEEQQLRIENAKLK 221

Query: 131 ---QQLRTA------PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKA-- 179
              ++LRT        A+T  SC S     Q +    N   G+ ++ +  + E +++A  
Sbjct: 222 AEVEKLRTVIGKYPPGASTTGSCSS--GNDQENRSSLNFYTGIFALEKSRIMEIVNQAME 279

Query: 180 ----TGTAVDWVQMPGMKPG------PDSVGIFAISQSCSG------VAARACGLVSLEP 223
                 TA + + +  ++ G       + V   ++  S +G       A+R  G+V L+ 
Sbjct: 280 ELQKMATAGEPLWVRSVETGREILNYDEYVKELSVESSSNGRPKRSIEASRETGVVFLDL 339

Query: 224 TKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQAYAPTTLAPARD 275
            ++ +   D   W            +++V     A N  G ++L++ +    T L P R+
Sbjct: 340 PRLVQSFMDANQWKEMFPCIISKAATVDVICHGEAPNKNGAVQLMFAELQMLTPLVPTRE 399

Query: 276 FWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIH 335
            + +RY   L      + + S+       +    A  V+    PSGC+I+    G   + 
Sbjct: 400 VYFVRYCKQLSAEQWAIVDVSIDKVEENID----ASLVKCRKRPSGCIIQDKTNGHCKVI 455

Query: 336 IVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEV------------------VYG 377
            V+HL  +  +V  + R +  S      R  +A    +                   V  
Sbjct: 456 WVEHLECQKNTVHTLYRTIVRSGLAFGARHWMATLQHQCERLVFFMATNVPTKDSTGVAT 515

Query: 378 LGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTN 437
           L  + ++L+  +QR++  F  ++   +   W+ ++    ED  I V+S K+L+    P  
Sbjct: 516 LAGRKSILK-LAQRMTWSFCHSIGASSYHTWNKVSTKTGED--IRVSSRKNLNDPGEPH- 571

Query: 438 SLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
                G I+CA +S+ L  V P LL  FLR+   RSEW
Sbjct: 572 -----GVIVCAVSSVWLP-VSPTLLFDFLRDESRRSEW 603


>gi|22475195|gb|AAM97321.1| homeodomain protein GhHOX1 [Gossypium hirsutum]
          Length = 753

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 125/518 (24%), Positives = 213/518 (41%), Gaps = 94/518 (18%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+TA+Q+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 101 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 156

Query: 87  QRKEASRLQTVNRKLTAMNKLLME----------------ENDRLQKQVSQLVCENGYMK 130
           +R E S L+    KL   NK + E                ++  +  +  QL  EN  +K
Sbjct: 157 ERHENSLLKQELDKLRDENKAMRETINKACCLNCGMATTAKDGSITAEEQQLRIENAKLK 216

Query: 131 ---QQLRTA------PATTDASCDSVVTTPQHSLRD------ANNPAGLLSIAEETLAEF 175
              ++LRT        A+T  SC S       S  D          + ++ I  + + E 
Sbjct: 217 AEVEKLRTVIGKYPPGASTTGSCSSGNDQENRSSLDFYTGIFGLEKSRIMEIVNQAMEEL 276

Query: 176 LSKATGTAVDWVQMPGMKPG------PDSVGIFAISQSCSG------VAARACGLVSLEP 223
              AT     WV+   ++ G       + V   ++  S +G       A+R  G+V L+ 
Sbjct: 277 QKMATAGEPLWVR--SVETGREILNYDEYVKELSVESSSNGRPKRSIEASRETGVVFLDL 334

Query: 224 TKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQAYAPTTLAPARD 275
            ++ +   D   W            +++V     A N  G ++L++ +    T L P R+
Sbjct: 335 PRLVQSFMDANQWKEMFPCIISKAATVDVICHGEAPNKNGAVQLMFAELQMLTPLVPTRE 394

Query: 276 FWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIH 335
            + +RY   L      + + S+       +    A  V+    PSGC+I+    G   + 
Sbjct: 395 VYFVRYCKQLSAEQWAIVDVSIDKVEENID----ASLVKCRKRPSGCIIQDTTNGHCKVI 450

Query: 336 IVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEV------------------VYG 377
            V+HL  +  +V  + R +  S      R  +A    +                   V  
Sbjct: 451 WVEHLECQKNTVHTLYRTIVRSGLAFGARHWMATLQHQCERLVFFMATNVPTKDSTGVAT 510

Query: 378 LGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTN 437
           L  + ++L+  +QR++  F  ++   +   W+ ++    ED  I V+S K+L+    P  
Sbjct: 511 LAGRKSILK-LAQRMTWSFCHSIGASSYHTWNKVSTKTGED--IRVSSRKNLNDPGEPH- 566

Query: 438 SLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
                G I+CA +S+ L  V P LL  FLR+   RSEW
Sbjct: 567 -----GVIVCAVSSVWLP-VSPTLLFDFLRDESRRSEW 598


>gi|147826488|emb|CAN66212.1| hypothetical protein VITISV_013736 [Vitis vinifera]
          Length = 754

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 168/746 (22%), Positives = 283/746 (37%), Gaps = 192/746 (25%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 92  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 147

Query: 87  -QRKEASRLQTVNRKL----------------------TAM-------------NKLLME 110
            +R E ++L++ N KL                      TA+             N  L E
Sbjct: 148 HERHENTQLRSENEKLRTENLRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 207

Query: 111 ENDRLQ----KQVSQLVCENGYMKQQLRTAPATTDASCDSVVTTP---------QHSLRD 157
           E DR+     K V + V     +  Q+ T P   D    +    P            LR 
Sbjct: 208 EIDRISAIAAKYVGKPVVNYPXIPPQVPTRP--LDLGVGNFGAQPGLGGELFGASDLLRS 265

Query: 158 ANNPAG-----LLSIAEETLAEFLSKA-----------TGTAVDWVQMPGMKPGPDSVGI 201
            N P       ++ +A   + E    A            GT  +  +   ++  P  +G 
Sbjct: 266 INGPTEADKPMIIELAVAAMEELFRMAQMGEPLWLPSLDGTTTELSEDEYIRSFPRGIGP 325

Query: 202 FAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN- 253
                 C   A+R   +V +    + EIL D   W            +LEV +   AGN 
Sbjct: 326 KPAGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNY 383

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            G  +++  +   P+ L P R+ + +RY     +G+  V + SL      P        V
Sbjct: 384 NGAFQVMTAEFQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSP-------VV 436

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGE 373
           R    PSGCLI+    G S +  V+H+ ++   V  + + L  S      +  +A    +
Sbjct: 437 RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNIYKQLVNSGLAFGAKRWVATLDRQ 496

Query: 374 --------------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                         V+     + ++L+  ++R+   F   V+      W+ ++  GA+DV
Sbjct: 497 CERLASAMATNIPTVITSQEGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGSGADDV 555

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFN 477
              V + KS+     P        GI+ + A+     VPP  +  FLR+   RSEW    
Sbjct: 556 --RVMTRKSVDDPGRPP-------GIVLSAATSFWLPVPPKRVFDFLRDENSRSEW---- 602

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEEL---LEVIRLEGHSLAQED 534
            D  S                       ++  + H    ++    + ++R+   + +Q +
Sbjct: 603 -DILSNGG--------------------VVQEMAHIANGQDTGNCVSLLRVNSANSSQSN 641

Query: 535 AFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
             +     L + C+  D  A    S +++AP+D +          PD   LLPSGF I+ 
Sbjct: 642 MLI-----LQESCT--DSTA----SFVIYAPVDVVAMNMVLNGGDPDYVALLPSGFAIL- 689

Query: 586 LDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQ 645
                   PD  TAH  +      EVG                 S+LT+AFQ   +S   
Sbjct: 690 --------PDGTTAHGGV----IGEVGSGG--------------SLLTVAFQILVDSVPT 723

Query: 646 DNVATMARQYVRSVIS-SVQRVAMAI 670
             ++  +   V ++I+ +V R+  A+
Sbjct: 724 AKLSLGSVATVNNLIACTVDRIKAAV 749


>gi|255549944|ref|XP_002516023.1| homeobox protein, putative [Ricinus communis]
 gi|223544928|gb|EEF46443.1| homeobox protein, putative [Ricinus communis]
          Length = 758

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 121/516 (23%), Positives = 212/516 (41%), Gaps = 92/516 (17%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+TAEQ+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 109 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 164

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDR----------------LQKQVSQLVCENGYMK 130
           +R E S L+T   KL   NK + E  ++                L  +  QL  EN  +K
Sbjct: 165 ERHENSLLKTEMEKLRDENKAMRETINKACCPNCGTATTSRDTSLTTEEQQLRIENAKLK 224

Query: 131 ---QQLRTA----PATTDASCDSVVTTPQHSLRD------ANNPAGLLSIAEETLAEFLS 177
              ++LR A    P     SC +       S  D          + +  IA + + E   
Sbjct: 225 SEVEKLRAALGKYPPGAAPSCSAGSEQENRSSLDFYTGIFGLEKSRITEIANQAMEELNK 284

Query: 178 KATGTAVDWVQMPGMKPG----PDSVGIFAISQSCSGVA------ARACGLVSLEPTKIA 227
            AT     W++            + +  F +    +G +      +R  G+V ++  ++ 
Sbjct: 285 MATAGEPLWIRSVETDREILNYDEYIKEFNVENPSNGRSKKSIEVSRETGVVFVDLPRLV 344

Query: 228 EILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQAYAPTTLAPARDFWTL 279
           +   D   W            +++V       N  G ++L++ +    T + P R+ + +
Sbjct: 345 QSFTDVNHWKEMFPCLISKAATVDVICNGEGPNRDGAVQLMFAEVQMLTPMVPTREVYFV 404

Query: 280 RYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDH 339
           RY   L      + + S+       +    A  V+    PSGC+I     G   +  V+H
Sbjct: 405 RYCKQLSAEQWAIVDVSIDNVEDNID----ASLVKCRKRPSGCIIEDKSNGHCKVTWVEH 460

Query: 340 LNLEAWSVPEVLRPLYESSKVVAQRMTIA--------------------ETSGEVVYGLG 379
           L  +  +V  + R +  +      R  +A                    +++G  V  L 
Sbjct: 461 LECQKSTVHTIYRTIVNTGLAFGARHWVATLQLQCERIVFFMATNVPTKDSTG--VATLA 518

Query: 380 RQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSL 439
            + ++L+  +QR++  F  A+   +   W+ +T    ED  I ++S K+L+  + P    
Sbjct: 519 GRKSILK-LAQRMTWSFCRAIGASSYHTWNRVTSKTGED--IRISSRKNLNDPAEP---- 571

Query: 440 AFLGGILCAKASMLLQNVPPALLVRFLRE--HRSEW 473
             LG ILCA +S+ L  V P +L  +LR+  HR+EW
Sbjct: 572 --LGVILCAVSSVWLP-VSPHVLFDYLRDDTHRNEW 604


>gi|109729924|tpg|DAA05776.1| TPA_inf: class IV HD-Zip protein HDZ42 [Physcomitrella patens]
          Length = 794

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 228/583 (39%), Gaps = 136/583 (23%)

Query: 6   QQQQQQQRE--SSSGSINKH-----------QLDNGKYVRYTAEQVEALERVYSECPKPS 52
           QQQ+ ++ E  S SGS N                  +Y R+T  Q++ +E ++ ECP P 
Sbjct: 72  QQQKNKEEEYGSRSGSDNMEGGSDDDQDPDRPPRKKRYHRHTPRQIQEMEMLFKECPHPD 131

Query: 53  SLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLM 109
             +RQQL ++      +EP+Q+K WFQNRR   K   +R E S L+  N KL + N ++ 
Sbjct: 132 DKQRQQLSKDL----GLEPRQVKFWFQNRRTHMKAQTERAENSMLRAENEKLRSENVIMR 187

Query: 110 EENDRLQ----------KQVS----QLVCENGYMKQQL------------RTAP-----A 138
           E     Q           ++S    QL  EN  +K++L            R  P     A
Sbjct: 188 EALKNPQCPHCGGPATVGEMSFDEQQLRLENVRLKEELDRVSALAAKYLGRPIPPMAPLA 247

Query: 139 TTDASCD---------------------SVVTTPQHSLRD-ANNPAGL--------LSIA 168
              +S D                     S+V  P  S+ D A  P GL        + +A
Sbjct: 248 LPSSSLDLQVGAGGSSFGGLHPAQAGNLSMVQGP--SVADVATRPGGLTEAEKPMVVELA 305

Query: 169 EETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFA-ISQSCSGVAARACGL--------- 218
              + E +  A      WV+ P  + G + +     + QS  G+  +  GL         
Sbjct: 306 MMAMEELVRMAQSEEPLWVRTP--ESGREQLNYDEYLRQSPRGIGMKPPGLKTEVTRETA 363

Query: 219 -VSLEPTKIAEILKDRPSWF-------RDCRSLEVFTMFPAGNA-GTIELLYTQAYAPTT 269
            V +    + E L D   W            +++V +   AGN  G ++L+Y +    + 
Sbjct: 364 MVMMNGVNLVETLMDATQWIDMYPCMVSRALTVDVLSTGVAGNRNGALQLMYAELQVLSP 423

Query: 270 LAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDG 329
           L P R+ + LRY      G   V + S+      P P+     +R    PSG LI+    
Sbjct: 424 LVPTREIYFLRYCKQHAEGVWAVVDVSVESLRDNPPPS----LMRCRRRPSGILIQDTPN 479

Query: 330 GGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA------------QRMTIAETSGEVVYG 377
           G + +  V+H+  +  +V  + R L  S                 +R+     S      
Sbjct: 480 GYAKVTCVEHMEYDDRAVHRMYRELVNSGMAFGAQRWMATLQRQCERLASLLASNIASRD 539

Query: 378 LGRQPAV-----LRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTA 432
           LG  P+      +   +QR++  F   V+      W+ ++  G +DV   V + KS+   
Sbjct: 540 LGGVPSANGRRSMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGDDDV--RVMTRKSVDNP 597

Query: 433 SNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
             P       G +L A  SM L  V PA + +FLR+   RSEW
Sbjct: 598 GEPH------GIVLSAATSMWLP-VSPARVFQFLRDERLRSEW 633


>gi|109729926|tpg|DAA05777.1| TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens]
          Length = 799

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 177/791 (22%), Positives = 294/791 (37%), Gaps = 204/791 (25%)

Query: 6   QQQQQQQRESSSGSIN------KHQLDNG-----KYVRYTAEQVEALERVYSECPKPSSL 54
           Q+ ++++ ES SGS N          DN      +Y R+T  Q++ +E ++ ECP P   
Sbjct: 82  QKNKEEEYESRSGSDNMEGGSGDEDPDNNHPRKKRYHRHTPRQIQEMEMLFKECPHPDDK 141

Query: 55  RRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ----------RKEASRLQTVN------ 98
           +RQQL ++      +EP+Q+K WFQNRR + K           R E  ++++ N      
Sbjct: 142 QRQQLSKDL----GLEPRQVKFWFQNRRTQMKAQTERAENSMLRAENEKVRSENLIMREA 197

Query: 99  ----------------------RKLTAMNKLLMEENDRLQKQVSQ--------------- 121
                                 ++L   N  L EE DR+    ++               
Sbjct: 198 LKNPQCPHCGGPATVGEMTFDEQQLRIENVRLKEELDRVSALAAKYLGRPITPMAPLALP 257

Query: 122 -----LVCENGYMKQQLRTAPATTD----ASCDSVVTTPQHSLRDANNPAGLLSIAEETL 172
                L    G     +   P   D     S   V T P   L +A  P  ++ +A   +
Sbjct: 258 SSSLDLQVGGGSSFGGMHPTPGNLDLVAGPSVADVATRP-GGLTEAEKPM-VVELAMMAM 315

Query: 173 AEFLSKATGTAVDWVQMPG----------MKPGPDSVGIFAISQSCSGV---AARACGLV 219
            E +  A      W+ M            M+  P  +G+       SG+   A R   LV
Sbjct: 316 EELVRMAQAEEPLWLSMDSGKAQLNYDEYMRQFPRGIGMRP-----SGLKPEATRETALV 370

Query: 220 SLEPTKIAEILKDRPSWF-------RDCRSLEVFTMFPAGN-AGTIELLYTQAYAPTTLA 271
            +    + E L D   W            +++V +    GN  G ++L+Y +    + L 
Sbjct: 371 MMNGVNLVETLMDATQWMDMFPCMVSRALTVDVLSTGVTGNRNGALQLMYAELQVLSPLV 430

Query: 272 PARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGG 331
           P R+ + LRY      G   V + S+      P P+     +R    PSG LI+    G 
Sbjct: 431 PTREIYFLRYCKQHAEGVWAVVDVSVDSLRDNPPPS----LMRCRRRPSGVLIQDTPNGY 486

Query: 332 SIIHIVDHLNLEAWSVPEVLRPLYESSKVVA------------QRMTIAETSGEVVYGLG 379
           + +  V+H+  +  +V  + R L  +                 +R+     S      LG
Sbjct: 487 AKVTCVEHMEYDDRAVHRMYRELVNTGMAFGAQRWLATLQRQCERLASLLASNIASRDLG 546

Query: 380 RQPAV-----LRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
             P+      +   +QR++  F   V+      W+ ++  G +DV   V + KS+     
Sbjct: 547 GVPSASGRRSMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGDDDV--RVMTRKSVDNPGE 604

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSAASLKAGSYA 492
           P       G +L A  SM L  V PA + +FLR+   RSEW     D  S          
Sbjct: 605 PH------GIVLSAATSMWLP-VSPARVFQFLRDERLRSEW-----DILSNGG------- 645

Query: 493 YPGMRPTRFTGSQIIMPLGHTIEHEE---LLEVIRLEGHSLAQEDAFVSRDIHLLQICSG 549
                        I+  + H  + ++    + ++R+   +  Q +  +     L + C+ 
Sbjct: 646 -------------IVTEMAHIAKGQDPGNSVSLLRVNAMNSNQSNMLI-----LQESCTD 687

Query: 550 VDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLDSKTPDTPDTLTAH 600
           V      + S +++AP+D     +    G      LLPSGF I+      PD P      
Sbjct: 688 V------SGSLVIYAPVDIPAMNLVLQGGDPAYVALLPSGFAIL------PDGPGGERGS 735

Query: 601 RTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVI 660
             +D  S L            + S   T S+LT+AFQ    S     ++  +   V ++I
Sbjct: 736 LGVDQGSQL------------TESSRGTGSLLTVAFQILVSSIPSARLSLESVATVNNLI 783

Query: 661 S-SVQRVAMAI 670
           S +VQR+  A+
Sbjct: 784 SCTVQRIKSAL 794


>gi|224073973|ref|XP_002304207.1| predicted protein [Populus trichocarpa]
 gi|222841639|gb|EEE79186.1| predicted protein [Populus trichocarpa]
          Length = 759

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 123/520 (23%), Positives = 214/520 (41%), Gaps = 99/520 (19%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+TAEQ+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 109 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 164

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDR----------------LQKQVSQLVCENGYMK 130
           +R E S L+T   KL   NK + E  ++                L  +  QL  EN  +K
Sbjct: 165 ERHENSLLKTEMDKLREENKTMRETINKACCPNCGTATTSRGTALTTEEQQLRIENAKLK 224

Query: 131 QQL--------RTAPATTDASCDSVVTTPQHSLRD------ANNPAGLLSIAEETLAEFL 176
            ++        + +P  T ASC +       S  D        +   +  IA + + E  
Sbjct: 225 AEVEKLRVVIGKYSPGAT-ASCSAENDQENRSSLDFYTGIFGLDKTRITEIANQAMEELK 283

Query: 177 SKATGTAVDWVQMPGMKPGPDSVGI------FAISQSCSG-------VAARACGLVSLEP 223
             AT     W++   ++ G + +        F    S +         A+R   +V ++ 
Sbjct: 284 KMATAGEPLWIR--SVETGREILNYDEYTKEFGSENSSNNGRPKRSIEASRETRVVFVDL 341

Query: 224 TKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQAYAPTTLAPARD 275
            ++ +   D   W            +++V       N  G ++L++ +    T + P R+
Sbjct: 342 PRLVQSFMDVNRWKEMFPCLISKAATVDVICNGEGANRNGAVQLMFAEVQMLTPMVPTRE 401

Query: 276 FWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIH 335
            + +RY   L+     + + S+       +    A  V+    PSGC+I     G   + 
Sbjct: 402 VYFVRYCKQLNAEQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIEDKSNGHCKVI 457

Query: 336 IVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------------------ETSGEVV 375
            V+HL  +  +V  + R +  S      R  IA                    +++G  V
Sbjct: 458 WVEHLECQKSAVHTMFRTVVHSGLAFGARHWIATLQLQCERLVFFMATNVPTKDSTG--V 515

Query: 376 YGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNP 435
             L  + ++L+  +QR++  F  A+   +   WS ++    ED  I ++S K+L+    P
Sbjct: 516 ATLAGRKSILK-LAQRMTWSFCRAIGASSYHTWSKVSSKTGED--IRISSRKNLNEPGEP 572

Query: 436 TNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
                 +G ILCA +S+ L  VPP +L  FLR+   R+EW
Sbjct: 573 ------VGLILCAVSSVWLP-VPPHILFDFLRDEARRNEW 605


>gi|297739295|emb|CBI28946.3| unnamed protein product [Vitis vinifera]
          Length = 757

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 168/750 (22%), Positives = 282/750 (37%), Gaps = 197/750 (26%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 92  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 147

Query: 87  -QRKEASRLQTVNRKL----------------------TAM-------------NKLLME 110
            +R E ++L++ N KL                      TA+             N  L E
Sbjct: 148 HERHENTQLRSENEKLRTENLRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 207

Query: 111 ENDRLQKQVSQLVCE---NGYMKQQLRTAPATTDASCDSVVTTP---------QHSLRDA 158
           E DR+    ++ V +   N  +  Q+ T P   D    +    P            LR  
Sbjct: 208 EIDRISAIAAKYVGKPVVNYPLIPQVPTRP--LDLGVGNFGAQPGLGGELFGASDLLRSI 265

Query: 159 NNPAG-----LLSIAEETLAEFLSKA-----------TGTAVDWVQMPGMKPGPDSVGIF 202
           N P       ++ +A   + E    A            GT  +  +   ++  P  +G  
Sbjct: 266 NGPTEADKPMIIELAVAAMEELFRMAQMGEPLWLPSLDGTTTELSEDEYIRSFPRGIGPK 325

Query: 203 AISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-A 254
                C   A+R   +V +    + EIL D   W            +LEV +   AGN  
Sbjct: 326 PPGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 383

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           G  +++  +   P+ L P R+ + +RY     +G+  V + SL      P        VR
Sbjct: 384 GAFQVMTAEFQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSP-------VVR 436

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS--- 371
               PSGCLI+    G S +  V+H+ ++   V  + + L  S      +  +A      
Sbjct: 437 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNIYKQLVNSGLAFGAKRWVATLDRQC 496

Query: 372 ----------------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDG 415
                           G +    GR+   +   ++R+   F   V+      W+ ++  G
Sbjct: 497 ERLASAMATNIPTGEVGVITSQEGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGSG 554

Query: 416 AEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           A+DV   V + KS+     P        GI+ + A+     VPP  +  FLR+   RSEW
Sbjct: 555 ADDV--RVMTRKSVDDPGRPP-------GIVLSAATSFWLPVPPKRVFDFLRDENSRSEW 605

Query: 474 ADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEEL---LEVIRLEGHSL 530
                D  S                       ++  + H    ++    + ++R+   + 
Sbjct: 606 -----DILSNGG--------------------VVQEMAHIANGQDTGNCVSLLRVNSANS 640

Query: 531 AQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGF 581
           +Q +  +     L + C+  D  A    S +++AP+D +          PD   LLPSGF
Sbjct: 641 SQSNMLI-----LQESCT--DSTA----SFVIYAPVDVVAMNMVLNGGDPDYVALLPSGF 689

Query: 582 RIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFE 641
            I+         PD  TAH  +      EVG                 S+LT+AFQ   +
Sbjct: 690 AIL---------PDGTTAHGGV----IGEVGSGG--------------SLLTVAFQILVD 722

Query: 642 SNLQDNVATMARQYVRSVIS-SVQRVAMAI 670
           S     ++  +   V ++I+ +V R+  A+
Sbjct: 723 SVPTAKLSLGSVATVNNLIACTVDRIKAAV 752


>gi|109729914|tpg|DAA05771.1| TPA_inf: class IV HD-Zip protein HDZ41 [Selaginella moellendorffii]
          Length = 815

 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 169/767 (22%), Positives = 284/767 (37%), Gaps = 202/767 (26%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           ++ R+T  Q++ +E V+ ECP P   +R QL RE      +EP+Q+K WFQNRR + K  
Sbjct: 122 RFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSREL----GLEPRQVKFWFQNRRTQMKAH 177

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC----------ENGYMKQQLR---- 134
           +E +     N  L A N+ L  EN  +++ +    C          E  Y +QQLR    
Sbjct: 178 QERAE----NSMLRAENERLRSENIAMREALKNATCPHCGGPATLGEMSYDEQQLRIENA 233

Query: 135 -----------------------------------------TAPATTDASCDSVVTTPQH 153
                                                    +A A    S  ++  TP  
Sbjct: 234 HLKDELDRVSSLAAKYLSKPGGGAPHGLSVQTSLPGTSLDPSAAAFGPQSNSALAVTPGP 293

Query: 154 SLRD-ANNPAGLLSIAEETLA--------EFLSKATGTAVDWV-QMPGMKP---GPDSVG 200
           S+ + A  P GL  + +  +A        E L+ A      W+ +  G K    G + + 
Sbjct: 294 SMLELATRPGGLSQVEKPLVAELAIIAMEELLALAQSREPLWILEENGAKESLNGEEYMQ 353

Query: 201 IFAISQSCSGVAARA-----CGLVSLEPTKIAEILKDRPSWFR--DC---RSL--EVFTM 248
            F+     + V  +A      GLV +    + + + D   W     C   R+L  EV + 
Sbjct: 354 QFSRGLGPTPVGLKAEVTRDTGLVMMNGAALVDTIMDAGRWMDMFSCIISRALTSEVLST 413

Query: 249 FPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA 307
              GN    ++L+Y +    + L P R+ + LRY      G   + + S+ G    P P 
Sbjct: 414 GVGGNWNNALQLMYAEFQVLSPLVPTREAYFLRYCKQHAEGVWAIVDVSVDGLRENPPPQ 473

Query: 308 SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI 367
                +R  + PSG LI+    G S + I+ H+  +   V  + R L  S      +  +
Sbjct: 474 -----LRNRLRPSGFLIQDMPNGYSKVTILQHMEYDDRQVNNMYRGLVSSGLAFGAKRWL 528

Query: 368 AETS-------------------GEVVYGLGRQPAV-------------LRTFSQRLSRG 395
           A                      G   YG   Q  +             +   +QR++  
Sbjct: 529 ATLQRQCERLAVLLATNISPRDLGVSSYGPADQSLLFFAVISNATGRRSMLKLAQRMTNN 588

Query: 396 FNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQ 455
           F   V+      W+ ++  G +DV   V + KS+     P        GI+ + A+ L  
Sbjct: 589 FCAGVSASTVHTWTTLSGSGEDDV--RVMTRKSIDNPGEPP-------GIVLSAATSLWM 639

Query: 456 NVPPALLVRFLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHT 513
            V P  +  FLR+   RSEW   +    +  S++  ++   G  P               
Sbjct: 640 PVSPQRVFEFLRDDRLRSEWDILS----NGGSVQEMAHIAKGHDPG-------------- 681

Query: 514 IEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPID----EM 569
                ++ ++R+   + +Q +  + ++       S  DE+     S +V+AP+D     +
Sbjct: 682 ----NVISLLRVNALNTSQSNMLILQE-------SSTDESG----SLIVYAPVDIPAMNL 726

Query: 570 FPDDG-----PLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSS 624
               G      LLPSGF I+      P+ P ++                 T P     +S
Sbjct: 727 VMQGGDPAYVALLPSGFAIL------PEGPRSI----------------GTTPETSSRAS 764

Query: 625 CHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS-SVQRVAMAI 670
                 +LT+AFQ    +     +   +   V S+IS +VQR+  A+
Sbjct: 765 SSEPGCLLTVAFQILVSNVPTAKLNLESVTTVNSLISCTVQRIKTAL 811


>gi|359485664|ref|XP_002273837.2| PREDICTED: homeobox-leucine zipper protein HDG2 [Vitis vinifera]
          Length = 762

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 169/747 (22%), Positives = 279/747 (37%), Gaps = 193/747 (25%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 99  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 154

Query: 87  -QRKEASRLQTVNRKL----------------------TAM-------------NKLLME 110
            +R E ++L++ N KL                      TA+             N  L E
Sbjct: 155 HERHENTQLRSENEKLRTENLRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 214

Query: 111 ENDRLQKQVSQLVCE---NGYMKQQLRTAPATTDASCDSVVTTP---------QHSLRDA 158
           E DR+    ++ V +   N  +  Q+ T P   D    +    P            LR  
Sbjct: 215 EIDRISAIAAKYVGKPVVNYPLIPQVPTRP--LDLGVGNFGAQPGLGGELFGASDLLRSI 272

Query: 159 NNPAG-----LLSIAEETLAEFLSKA-----------TGTAVDWVQMPGMKPGPDSVGIF 202
           N P       ++ +A   + E    A            GT  +  +   ++  P  +G  
Sbjct: 273 NGPTEADKPMIIELAVAAMEELFRMAQMGEPLWLPSLDGTTTELSEDEYIRSFPRGIGPK 332

Query: 203 AISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-A 254
                C   A+R   +V +    + EIL D   W            +LEV +   AGN  
Sbjct: 333 PPGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYN 390

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           G  +++  +   P+ L P R+ + +RY     +G+  V + SL      P        VR
Sbjct: 391 GAFQVMTAEFQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSP-------VVR 443

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS--- 371
               PSGCLI+    G S +  V+H+ ++   V  + + L  S      +  +A      
Sbjct: 444 CRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNIYKQLVNSGLAFGAKRWVATLDRQC 503

Query: 372 ----------------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDG 415
                           G +    GR+   +   ++R+   F   V+      W+ ++  G
Sbjct: 504 ERLASAMATNIPTGEVGVITSQEGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGSG 561

Query: 416 AEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           A+DV   V + KS+     P        GI+ + A+     VPP  +  FLR+   RSEW
Sbjct: 562 ADDV--RVMTRKSVDDPGRPP-------GIVLSAATSFWLPVPPKRVFDFLRDENSRSEW 612

Query: 474 ADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQE 533
                D  S                       ++  + H    ++    + L    L   
Sbjct: 613 -----DILSNGG--------------------VVQEMAHIANGQDTGNCVSL----LRSA 643

Query: 534 DAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRII 584
           ++  S  + L + C+  D  A    S +++AP+D +          PD   LLPSGF I+
Sbjct: 644 NSSQSNMLILQESCT--DSTA----SFVIYAPVDVVAMNMVLNGGDPDYVALLPSGFAIL 697

Query: 585 PLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNL 644
                    PD  TAH  +      EVG                 S+LT+AFQ   +S  
Sbjct: 698 ---------PDGTTAHGGV----IGEVGSGG--------------SLLTVAFQILVDSVP 730

Query: 645 QDNVATMARQYVRSVIS-SVQRVAMAI 670
              ++  +   V ++I+ +V R+  A+
Sbjct: 731 TAKLSLGSVATVNNLIACTVDRIKAAV 757


>gi|213950357|gb|ACJ54443.1| GL2a [Brassica napus]
          Length = 750

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 127/534 (23%), Positives = 218/534 (40%), Gaps = 93/534 (17%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T +Q+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 99  YHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 154

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEEN---------------------DRLQKQVSQLVCE 125
           +R E S L+    KL   NK + E                       D L  + ++L  E
Sbjct: 155 ERHENSLLKAELEKLREENKAMRESFSKANSSSCPNCGGGGGGGGSPDDLHLENTKLKAE 214

Query: 126 NGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT----- 180
              ++  L   P    ASC       Q  +       G+ ++ +  + E  ++AT     
Sbjct: 215 LDKLRAALGRTPYPLQASCSD---DQQRRVGSLELYTGVFALEKSRIVEIANRATLELQK 271

Query: 181 -GTAVDWVQMPGMKPGPDSVGI------FAISQSCSG------VAARACGLVSLEPTKIA 227
             T+ + + +  ++ G + +        F  +Q+ S        A+R  G+V ++  K+A
Sbjct: 272 MATSGEPLWLRSLETGREILNYDEYLKEFPQAQASSFHGRKTIEASRDVGIVFMDAHKLA 331

Query: 228 EILKDRPSW--FRDCRSLEVFTM-------FPAGNAGTIELLYTQAYAPTTLAPARDFWT 278
           +   D   W     C   +  T+        P+   G I+L++ +    T + P R+ + 
Sbjct: 332 QSFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYF 391

Query: 279 LRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVD 338
           +R    L      + + S+S      N       +R    PSGC+I     G S +  V+
Sbjct: 392 VRSCRQLSPEKWAIVDVSVSMEEDN-NAEKEGSLLRCRKRPSGCIIEDTSNGHSKVTWVE 450

Query: 339 HLNLEAWSVPEVLRPLYESSKVVAQRMTIA-------------------ETSGEVVYGLG 379
           HL+L A +V  + R    +      +  +A                   + S  V    G
Sbjct: 451 HLDLSASTVQPLFRSFVNTGLAFGAKHWVATLQLHCERLVFFMATNVPTKDSLGVTTLAG 510

Query: 380 RQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSL 439
           R+ +VL+  +QR+++ F  A+   +   W+ +T    +D  + V+S K+L     PT   
Sbjct: 511 RK-SVLK-MAQRMTQSFYRAIAASSYHQWNKITTKTGQD--MRVSSRKNLHDPGEPT--- 563

Query: 440 AFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAY--SAASLKAG 489
              G I+CA +S+ L  V P LL  F R+   R EW   +  A+  S  SL  G
Sbjct: 564 ---GVIVCASSSLWLP-VSPTLLFDFFRDETRRHEWDALSNGAHVQSIVSLSKG 613


>gi|19070143|gb|AAL83725.1|AF328842_1 homeodomain protein HB2 [Picea abies]
          Length = 708

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 175/747 (23%), Positives = 282/747 (37%), Gaps = 177/747 (23%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R  + +      N+E +Q+K+WFQNRR + K  
Sbjct: 29  RYHRHTPQQIQELEALFKECPHPDEKQRLDISKRL----NLETRQVKLWFQNRRTQMKTQ 84

Query: 87  -QRKEASRLQTVNRKLTAMN----------------------------KLLMEENDRLQK 117
            +R E S L+  N KL + N                            + L  EN RL+K
Sbjct: 85  LERHENSILRQENEKLRSENLSIRDAMRNPICTNCGGPAVLGEMSFEEQQLRIENARLKK 144

Query: 118 QVSQLVCENGYMKQQ----LRTAPATTDASCDSVVTTPQHSLRDA-----NNPAG----- 163
           ++ +L    G    +    + + P    +S D  V     SL        + PAG     
Sbjct: 145 ELDRLCALAGKFFGRPVPSMPSVPLMPKSSLDLGVGGMPTSLPSGCADLMHGPAGGRTGN 204

Query: 164 --------LLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGI--------FAISQS 207
                   L  +A  ++ E    A      W+  P +  G +++            I+  
Sbjct: 205 IIGIERSMLAELALASMDELFKMAQADETLWI--PNLDAGKETLNYEEYMRQFPSTITPK 262

Query: 208 CSGVAA---RACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGT 256
             G+A    R  G+V      + E L D   W             ++V +   +G   G 
Sbjct: 263 LIGLATEATRETGMVITNSLNLVETLMDVDRWKEMFPCMISRAAMVDVISSGMSGTRNGA 322

Query: 257 IELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAE 316
           ++L+Y +    + L PAR+ + LR+      G   V + S+          S A F++  
Sbjct: 323 LQLMYAELQVLSPLVPAREVYFLRFCKQHAEGVWAVVDVSVDSL----RDNSPAGFMKCR 378

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVV-AQR----------- 364
            LPSGCLI+    G S +  V+H   +   V  + R L  S     AQR           
Sbjct: 379 RLPSGCLIQDMPNGYSKVTWVEHAEYDDRGVHRLYRSLLNSGMAFGAQRWLATLQRQCEC 438

Query: 365 MTIAETSGEVVYGLGRQPAVLRT---------FSQRLSRGFNDAVNGFNDDGWSLMTCDG 415
           + I   +  V     R P  +RT          +QR++  F   V+      W+ ++ + 
Sbjct: 439 LAILMATANVT---ARDPTAIRTPNGRRSMLRLAQRMTDNFCAGVSASTVHTWNKLSGNI 495

Query: 416 AEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
            +DV   V + KS+     P        G++ + A+ +   V P  L  FLR+   RSEW
Sbjct: 496 DDDV--RVMTRKSVDDPGEPP-------GVVLSAATSVWLPVSPQRLFDFLRDERLRSEW 546

Query: 474 ADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQE 533
              +    +   ++  ++   G  P            G+ +              SL + 
Sbjct: 547 DILS----NGGPMQEMAHIPKGQDP------------GNCV--------------SLLKA 576

Query: 534 DAFVSRDIHLLQICSGVDENAVGACSELVFAPID------EMFPDDGP---LLPSGFRII 584
            A  S     + I      NA G  S +V+AP+D       M   D P   LLPSGF I+
Sbjct: 577 SAMNSNQSSSMLILQKTCTNASG--SLVVYAPVDIPAMHVVMSGGDPPYVALLPSGFAIL 634

Query: 585 PLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNL 644
           P   K           R L L  S       +P  G         S+LT+AFQ    S  
Sbjct: 635 PNGPKC----------RPLALNPSGNGVGVNSPRVGG--------SLLTVAFQILVNSLP 676

Query: 645 QDNVATMARQYVRSVIS-SVQRVAMAI 670
              +   + + V ++IS +VQ++  A+
Sbjct: 677 TAKLTVESVETVNNLISCTVQKIKAAL 703


>gi|357454911|ref|XP_003597736.1| Homeobox-leucine zipper protein GLABRA [Medicago truncatula]
 gi|355486784|gb|AES67987.1| Homeobox-leucine zipper protein GLABRA [Medicago truncatula]
          Length = 794

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 120/531 (22%), Positives = 217/531 (40%), Gaps = 120/531 (22%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T+EQ+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 143 YHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 198

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDR----------------LQKQVSQLVCENGYMK 130
           +R E S L++   KL   NK L E  ++                +  +  QL  EN  +K
Sbjct: 199 ERHENSLLKSEIEKLREKNKTLRETINKACCPNCGVPTTNRDGTMATEEQQLRIENAKLK 258

Query: 131 QQL--------RTAPATTDASCDSVVTTPQHSLRDA---------NNPAGLLSIAEETLA 173
            ++        + A  T   SC +  +  Q +++ +          + + ++ +  + + 
Sbjct: 259 AEVERLRAALGKYASGTMSPSCST--SHDQENIKSSLDFYTGIFCLDESRIMDVVNQAME 316

Query: 174 EFLSKATGTAVDWVQMPGMKPGPDSVGI------FAISQSCSG------VAARACGLVSL 221
           E +  AT     W++   ++ G + +        FA   S  G       A+R  G+V  
Sbjct: 317 ELIKMATMGEPMWLR--SLETGREILNYDEYMKEFADENSDHGRPKRSIEASRDTGVVFA 374

Query: 222 EPTKIAEILKDRPSWFRDCRSLEVFTMFP-----------------AGNAGTIELLYTQA 264
           +  +I +   D   W           MFP                 +   G ++L++ + 
Sbjct: 375 DLPRIVQCFLDANQWKE---------MFPCLISKAATVDTICKGEGSNKNGAVQLMFAEL 425

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
              T + P R+ + +RY   L      + + S+       + +     V+    PSGC+I
Sbjct: 426 QMLTPMVPTREVYFVRYCKRLSGEKWAIVDVSIDKVEDNIDKS----LVKCRKRPSGCII 481

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---------------- 368
                G   +  V+HL  +   V  + R +  S      R  IA                
Sbjct: 482 EDKSNGHCKVVWVEHLECQKSIVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATN 541

Query: 369 ----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
               +++G  V  L  + ++L+  +QR++  F  A++  +   W+ +T    ED  I ++
Sbjct: 542 VPMKDSTG--VATLAGRKSILK-LAQRMTWSFCQAISASSFHTWTKVTSKTGED--IRIS 596

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           S K+L+  S P      LG I+CA +S+ L  + P +L  FLR+   R+EW
Sbjct: 597 SRKNLNDPSEP------LGLIVCAVSSIWLP-ISPNVLFDFLRDETRRTEW 640


>gi|356550528|ref|XP_003543638.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 762

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 126/525 (24%), Positives = 215/525 (40%), Gaps = 108/525 (20%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+TA+Q+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 111 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 166

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDR----------------LQKQVSQLVCENGYMK 130
           +R E S L++   KL   NK L E  ++                +  +  QL  EN  +K
Sbjct: 167 ERHENSLLKSEIEKLKEKNKSLRETINKACCPNCGVPTTSRDGVMPTEEQQLRIENAKLK 226

Query: 131 QQL--------RTAPATTDASCDSVVTTPQHSLRD------ANNPAGLLSIAEETLAEFL 176
            ++        + AP +T  SC S       S  D        + + ++ I  + + E +
Sbjct: 227 AEVEKLRAALGKYAPGSTSPSCSSGHDQENRSSLDFYTGIFGLDKSRIMDIVNQAMEELI 286

Query: 177 SKATGTAVDWVQMPGMKPG------PDSVGIFAI-SQSCSGVAARACGLVSLEPTK-IAE 228
             AT     W++    + G       + V  FA+ + S SG   R     S+E ++  A 
Sbjct: 287 KMATVGEPLWLR--SFETGREILNYDEYVKEFAVENSSSSGKPKR-----SIEASRDTAV 339

Query: 229 ILKDRPSWFRDCRSLEVFT-MFPA-----------------GNAGTIELLYTQAYAPTTL 270
           +  D PS  +    +  +  MFP                     G ++L++ +    T +
Sbjct: 340 VFVDLPSLVQSFLDVNQWKEMFPCLISKAATVDVICNGEGLSRNGAVQLMFAELQMLTPM 399

Query: 271 APARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGG 330
            P R+ + +R+   L      + + S+       +    A  V+    PSGC+I     G
Sbjct: 400 VPTREVYFVRFCKQLSAEQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIEDKSNG 455

Query: 331 GSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------------------ET 370
              +  V+H   +  +V  + R +  S      R  IA                    ++
Sbjct: 456 HCKVIWVEHSECQKSAVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDS 515

Query: 371 SGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLS 430
           +G  V  L  + ++L+  +QR++  F  A+   +   W+ +T    ED  I ++S K+L+
Sbjct: 516 TG--VATLAGRKSILK-LAQRMTWSFCHAIGASSIHAWTKVTSKTGED--IRISSRKNLN 570

Query: 431 TASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
               P      LG ILCA  S+ L  V P +L  FLR+   R+EW
Sbjct: 571 DPGEP------LGLILCAVCSVWLP-VSPNVLFDFLRDENRRTEW 608


>gi|449434374|ref|XP_004134971.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 721

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 147/676 (21%), Positives = 250/676 (36%), Gaps = 161/676 (23%)

Query: 14  ESSSGSINKHQLDNGK-YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPK 72
           ES+ G+  + Q    K Y R+T  Q++ +E  + ECP P   +R +L RE      +EP 
Sbjct: 36  ESACGTDQQQQRSKKKRYNRHTQHQIQEMEAFFKECPHPDDKQRMELSREL----GLEPL 91

Query: 73  QIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLME------------------- 110
           Q+K WFQN+R + K   +R E + L+  N KL A N    E                   
Sbjct: 92  QVKFWFQNKRTQMKAQHERHENAILKAENEKLRAENIRYREAFAHSTCPNCGSSSTALGE 151

Query: 111 ----------ENDRLQKQVSQLVCENGYMKQ------QLRTAPATTDASCDSVVTTPQHS 154
                     EN RL+ ++ ++   +GY  +      QL T   T           PQ S
Sbjct: 152 MSFDDQHLRIENSRLRDEIERM---SGYGSKCTKPYYQLPTNAPTRSLDLGITNFGPQSS 208

Query: 155 ------------LRDANNPAG-----LLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
                        R  + P+      ++ +A   + E    A G    WV   G   G  
Sbjct: 209 GFVGEMYGAADFFRSISRPSEGEKPVIVELAVSGMEELRRMAQGGEPLWVAGDGKSSGEV 268

Query: 198 SV-----------GIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRD 239
            +           GI          A+R   +V +   K+ +I  D   W          
Sbjct: 269 VLNEAEYLRSFGGGIVGKPMGFRTEASRVSAVVFMNHMKLVDIFMDATQWSTVFCGIVSR 328

Query: 240 CRSLEVFT-MFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS 298
             ++E+ +   P    G + ++  +   P+ L P R+ + +RY     +GS  V + SL 
Sbjct: 329 ASTVEILSPGLPGNFNGALHVMSAEFQVPSPLVPTRENYFVRYCKQQTDGSWAVADVSLD 388

Query: 299 GSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS 358
                P P +  +       PSGCLI+    G S I  V+H+ ++   VP + R L  S 
Sbjct: 389 TLRPSPIPNTRRK-------PSGCLIQELPNGYSKITWVEHVEVDETGVPTMYRTLVNSG 441

Query: 359 KVVAQR------------------MTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAV 400
                +                   TI      V+  +  + ++L+  ++R+   F   V
Sbjct: 442 LAFGAKRWVATLDRQSERFATSIATTIPTGDLRVISSIEGRKSMLK-LAERMVTSFCAGV 500

Query: 401 NGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPA 460
              +   W+ +     ++V +   + KS      P        G++ + A+     V P 
Sbjct: 501 GASSVHAWTALPAAAGDEVRVV--TRKSTDEPGRPP-------GVVLSAATSFWIPVSPK 551

Query: 461 LLVRFLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEE 518
           ++  FLR+   RSEW     D  S   L                  Q +  + +      
Sbjct: 552 VVFDFLRKEKSRSEW-----DILSNGGL-----------------VQEMAHIANGRHSGN 589

Query: 519 LLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF-------- 570
            + ++R+   + +Q +  +     L + C+    ++ G  S +++AP+D +         
Sbjct: 590 CVSLLRVNSANSSQSNMLI-----LQESCT----DSTG--SYVIYAPVDTVAMNVVLSGC 638

Query: 571 -PDDGPLLPSGFRIIP 585
            PD   LLPSGF I+P
Sbjct: 639 DPDYVALLPSGFAILP 654


>gi|213950361|gb|ACJ54445.1| GL2a [Brassica rapa]
          Length = 750

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 127/532 (23%), Positives = 214/532 (40%), Gaps = 90/532 (16%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T +Q+  +E ++ E P P   +RQQL  +      + P+Q+K WFQNRR + K   
Sbjct: 100 YHRHTTDQIRHMEALFKETPHPDEKQRQQLSEQL----GLAPRQVKFWFQNRRTQIKAIQ 155

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQV-------------SQLVCENGYMK--- 130
           +R E S L+    KL   NK + E   +                    L+ EN  +K   
Sbjct: 156 ERHENSLLKAELEKLREENKAMRESFSKANSSSCLNCGGGGGGGSPDDLLLENTKLKAEL 215

Query: 131 QQLRTA----PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT------ 180
            +LR A    P    ASC       Q  +       G+ ++ +  + E  ++AT      
Sbjct: 216 DKLRAALGRTPYPLQASCSD---DQQRRVGSLELYTGVFALEKSRIVEIANRATLELQKM 272

Query: 181 GTAVDWVQMPGMKPGPDSVGI------FAISQSCSG------VAARACGLVSLEPTKIAE 228
            T+ + + +  ++ G + +        F   Q+ S        A+R  G+V ++  K+A+
Sbjct: 273 ATSGEPLWLRSLETGREILNYDEYLKEFPQDQTSSFHGRKTIEASRDVGIVFMDAHKLAQ 332

Query: 229 ILKDRPSW--FRDCRSLEVFTM-------FPAGNAGTIELLYTQAYAPTTLAPARDFWTL 279
              D   W     C   +  T+        P+   G I+L++ +    T + P R+ + +
Sbjct: 333 SFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRVDGAIQLMFGEMQLLTPVVPTREVYFV 392

Query: 280 RYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDH 339
           R    L      + + S+S      N       +R    PSGC+I     G S +  V+H
Sbjct: 393 RSCRQLSPEKWAIVDVSVSMEEDN-NAEKEGSLLRCRKRPSGCIIEDTSNGHSKVTWVEH 451

Query: 340 LNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEV------------------VYGLGRQ 381
           L+L A +V  + R    +      +  +A                        V  L  +
Sbjct: 452 LDLSASTVQPLFRSFVNTGLAFGAKHWVATLQLHCERLVFFMATNVPTKDSLGVTTLAGR 511

Query: 382 PAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAF 441
            +VL+  +QR+++ F  A+   +   W+ +T    +D  + V+S K+L     PT     
Sbjct: 512 KSVLK-MAQRMTQSFYRAIAASSYHQWNKITTKTGQD--MRVSSRKNLHDPGEPT----- 563

Query: 442 LGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAY--SAASLKAG 489
            G I+CA +S+ L  V P LL  F R+   R EW   +  A+  S  SL  G
Sbjct: 564 -GVIVCASSSLWLP-VSPTLLFDFFRDETRRHEWDALSNGAHVQSIVSLSKG 613


>gi|356522256|ref|XP_003529763.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 751

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 127/522 (24%), Positives = 214/522 (40%), Gaps = 100/522 (19%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+TAEQ+  +E ++ E P P   +RQQL  +      + P+Q+K WFQNRR + K   
Sbjct: 97  YHRHTAEQIREMEALFKESPHPDEKQRQQLSNQL----GLAPRQVKFWFQNRRTQIKAIQ 152

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDR----------------LQKQVSQLVCENGYMK 130
           +R E S L+T   +L   NK + E  ++                +  +  QL+ EN  +K
Sbjct: 153 ERHENSLLKTELDRLREENKAMRETINKSCCPNCGMVTATIDASMSTEEKQLLIENAKLK 212

Query: 131 ---QQLRTA-----PATTDASCDSVVTTPQHSLRDA----NNPAGL-----LSIAEETLA 173
              ++LRTA     P TT  +  S     +   R +    N   GL     + IA     
Sbjct: 213 AEVEKLRTALGKFSPRTTSPTTSSAGHHDEEENRSSLDFYNGIFGLDKSRIMDIANRATE 272

Query: 174 EFLSKATGTAVDWVQMPGMKPGPD------SVGIFAISQSCSG------VAARACGLVSL 221
           E +  A      WV+   ++ G D       V  F +  S S        A+R   +V +
Sbjct: 273 ELIKMANMGEPLWVR--SVETGRDILNYDEYVKEFEVENSGSERPKTFIEASRETEVVFM 330

Query: 222 EPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQAYAPTTLAPA 273
           +  ++ +   D   W            +++V       N  G ++L++ +    T + P 
Sbjct: 331 DLPRLLQSFLDVNQWKEMFPCLISKAATVDVICNGEGSNRNGAVQLMFAELQMLTPMVPT 390

Query: 274 RDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSI 333
           R+ + +R    L +    + + S+       +    A  V+    PSGC+I     G   
Sbjct: 391 REVYFVRCGKQLSDEQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIEDKSNGHCK 446

Query: 334 IHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI--------------------AETSGE 373
           +  V+HL  +  ++  + R +  S      R  I                     +++G 
Sbjct: 447 VIWVEHLECQKSTIHTMYRTIVNSGLAFGARHWIETLQLQCERLVFYMATNVPMKDSTG- 505

Query: 374 VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTAS 433
            V  L  + ++L+  +QR++  F  AV   +   W+ +T    ED  I ++S K+L+   
Sbjct: 506 -VATLAGRKSILK-LAQRMTWSFCHAVGASSFHTWTKVTSKTGED--IRISSRKNLNEPG 561

Query: 434 NPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
            P      LG ILCA +S+ L  V P +L  FLR+   R+EW
Sbjct: 562 EP------LGVILCAVSSVWLP-VSPNVLFDFLRDEARRNEW 596


>gi|224116084|ref|XP_002317205.1| predicted protein [Populus trichocarpa]
 gi|222860270|gb|EEE97817.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 162/754 (21%), Positives = 283/754 (37%), Gaps = 205/754 (27%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R++L RE      ++P Q+K WFQN+R + K +
Sbjct: 55  RYHRHTQRQIQEMEAFFQECPHPDDKQRKELSREL----GLDPLQVKFWFQNKRTQMKAQ 110

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN----------GYMKQQLRTAPA 138
            E S     N  L A N+ L  EN+R ++ +S   C N           + +Q LR   A
Sbjct: 111 HERSE----NSILKAENEKLRMENNRYKEALSSASCPNCGGPAALGEMSFDEQHLRIENA 166

Query: 139 TTDASCDSV-------VTTPQHSLR----------------------------------- 156
                 D +       V  P  SL                                    
Sbjct: 167 RLREEIDRISGIAAKYVGKPLSSLSNLSHHLPSRSLDLGVSNYGAHSGFVGEMFGATALL 226

Query: 157 -------DANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFA----IS 205
                  +A+ P  ++ +A   + E +  A      W+Q      G ++  +      + 
Sbjct: 227 GAVTGPTEADKPM-IVEVAVAAMEELMRMAQAGEPLWIQ------GENNTEVLNEEEYLR 279

Query: 206 QSCSGVAARACGL----------VSLEPTKIAEILKDRPSW-------FRDCRSLEVFTM 248
               G+  R  G+          V +    + EIL D   W            +LEV + 
Sbjct: 280 TFTRGIGPRPLGMRSEASRESAVVIMSHVNLVEILMDANQWSTIFCGIVSRAMTLEVLST 339

Query: 249 FPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA 307
             AGN  G ++++  +   P+ L P R+ + +RY     + +  V + SL       +  
Sbjct: 340 GVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHTDATWAVVDVSL-------DSL 392

Query: 308 SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS--------- 358
             +   +     SGCLI+    G S +  V+H  ++  SV  + RPL  S          
Sbjct: 393 CPSLMSKCRRRSSGCLIQELPNGYSNVVWVEHTEVDDRSVHNIYRPLVNSGLAFGAKRWV 452

Query: 359 -------KVVAQRMTIAETSGE---VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW 408
                  + +A  M I   +G+   +    GR+ ++L+  ++R+   F   V       W
Sbjct: 453 GTLDRQCERLASSMAINIPTGDLCVITTPEGRK-SILK-LAERMVMSFCTGVGASTAHTW 510

Query: 409 SLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE 468
           + ++  G++DV   V + KS+     P        GI+ + A+     VP   +  FL++
Sbjct: 511 TTLSATGSDDV--RVMTRKSMDDPGRPP-------GIVLSAATSFWIPVPSKKVFDFLKD 561

Query: 469 --HRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLE 526
             HRSEW   +    +   ++  ++   G  P                     + ++R+ 
Sbjct: 562 ENHRSEWDILS----NGGQVQEMAHIANGRDPG------------------NCVSLLRVN 599

Query: 527 GHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLL 577
             + +Q +  +     L + C+    ++ G  S +++AP+D            PD   LL
Sbjct: 600 STNSSQSNMLI-----LQESCT----DSTG--SYVIYAPVDISAMNIVLSGGDPDYVALL 648

Query: 578 PSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQ 637
           PSGF I+      PD P                 GPA     G         S+LT+AFQ
Sbjct: 649 PSGFAIL------PDGPG---------------YGPAGILDVGSGG------SLLTVAFQ 681

Query: 638 FPFESNLQDNVATMARQYVRSVIS-SVQRVAMAI 670
              +S     ++  +   V S+I  +V+R+  A+
Sbjct: 682 ILVDSVPSVKLSLGSVATVNSLIKCTVERIKAAV 715


>gi|302807022|ref|XP_002985242.1| hypothetical protein SELMODRAFT_234698 [Selaginella moellendorffii]
 gi|300147070|gb|EFJ13736.1| hypothetical protein SELMODRAFT_234698 [Selaginella moellendorffii]
          Length = 695

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 182/764 (23%), Positives = 284/764 (37%), Gaps = 180/764 (23%)

Query: 14  ESSSGSINKHQLD----NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNI 69
           E +SG   + Q D      +Y R+T +Q   LE  + ECP P   +RQ+L RE      +
Sbjct: 2   EGASGDDFEDQSDLQASKKRYHRHTVQQTRQLEMFFKECPHPDEKQRQELGREL----GL 57

Query: 70  EPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC----- 124
           EP+Q+K WFQNRR + K   E +     N  L A N+ L  EN  L++ +    C     
Sbjct: 58  EPRQVKFWFQNRRTQMKAHHERAD----NSILRAENENLRTENIALREALKDASCPKCGG 113

Query: 125 -----ENGYMKQQLRTAPA----------------------------------TTDASCD 145
                E  + +QQLR   A                                  T   + D
Sbjct: 114 QLTPGEMSFTEQQLRIENARLRDELNRVSALVAKYITRSAIPLNILPDFPFDITATGTSD 173

Query: 146 SVVTTPQHSLRDANNPAG-------------------LLSIAEETLAEFLSKATGTAVDW 186
           SV       L  A+ P G                   LL +A ET     S   GT    
Sbjct: 174 SVAVP--SILEVASRPGGVTESEKPVIAELAIVAMEELLLVAAETDGALWSSVDGTKEVL 231

Query: 187 VQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW---FRDCRS- 242
            Q    +  P  +G   +       A+R  GLV +    + + + +   W   F +  S 
Sbjct: 232 SQEEYFRQFPRGLGPRLMGMETE--ASRETGLVMMNAAGLIDTIMNVGRWVDMFSNIVSR 289

Query: 243 ---LEVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS 298
               +V T    GN    ++LLY +    + L P R+F+ LRY          + + S+ 
Sbjct: 290 AFTTQVLTTGVGGNWNNALQLLYAELQILSPLVPTREFFFLRYCKQHSERVWAIVDVSID 349

Query: 299 GSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS 358
           G    P P      +R  M PSG  I     G S +  V H+  +      +   L  S 
Sbjct: 350 GLRDNPAPQ-----LRCRMRPSGFFIEDLQNGYSKVTAVQHIEADHRQTENIYHGLMCSG 404

Query: 359 KVVA------------QRMTIAETSGEVVYGLGRQPAV-----LRTFSQRLSRGFNDAVN 401
                           +R+ I  T+      LG  P       +   +QR++  +   V+
Sbjct: 405 AAFGAKRWLAILQRQCERLGIMLTNNISARDLGVIPNANGRRSMLFLAQRMTSNYCAGVS 464

Query: 402 GFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPAL 461
                 W+ ++  G ED  I V + KS++    P        GI+ + A+ L   V    
Sbjct: 465 ASIVHTWTTLSGAGEED--IRVMTRKSVNNPGEPP-------GIVLSAATSLWVPVNSQR 515

Query: 462 LVRFLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEEL 519
           L  FLR+   RSEW   +         +  +   PG                       +
Sbjct: 516 LFEFLRDERLRSEWDILSNGGAVQEIARVATGQDPGC----------------------V 553

Query: 520 LEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPID----EMFPDDG- 574
           + ++R+   + +Q +  +     L + C+    +A G  S +V+AP+D     +    G 
Sbjct: 554 VSLLRVGALNTSQSNMLI-----LQESCT----DASG--SLIVYAPVDIPAMNLVMQGGD 602

Query: 575 ----PLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRS 630
                LLPSGF I         +PD   + RT         G   + A  ++SS   + +
Sbjct: 603 PATVALLPSGFAI---------SPDGAVSQRTTQEGGGAGGGGGADLA--EASSSSSSGA 651

Query: 631 VLTIAFQFPFESNL---QDNVATMARQYVRSVISS-VQRVAMAI 670
           +LT+AFQ    SN+   + N+ ++A   V S+ISS VQR+  A+
Sbjct: 652 LLTVAFQI-LVSNVPTAKLNLESVA--TVNSLISSTVQRIKTAL 692


>gi|255554965|ref|XP_002518520.1| homeobox protein, putative [Ricinus communis]
 gi|223542365|gb|EEF43907.1| homeobox protein, putative [Ricinus communis]
          Length = 727

 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 125/548 (22%), Positives = 211/548 (38%), Gaps = 136/548 (24%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR---- 84
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R +    
Sbjct: 61  RYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 116

Query: 85  -------------EKQRKEASRLQTV---------------------NRKLTAMNKLLME 110
                        EK R E +R +                        + L   N  L E
Sbjct: 117 HERQENSILKAENEKLRAENNRYKEALSNASCPNCGGPATLGEISFDEQHLRIENARLRE 176

Query: 111 ENDRLQK---------------------------QVSQLVCENGYMKQQ------LRTAP 137
           E DRL                              VS    ++GY+ +       LR+  
Sbjct: 177 EIDRLSGIAAKYIGKPISSLSHLSSHLPSRSLDLGVSNFGTQSGYVGEMYGATDFLRSIT 236

Query: 138 ATTDAS----CDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
             T+A      +  V   +  +R A     L    E +  E L++      ++++     
Sbjct: 237 GPTEAEKPMIVELAVAAMEELMRMAQAGDPLWVPGENSTTEVLNEE-----EYLRAFPRG 291

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVF 246
            GP  +G+          A+R   +V +    + EIL D   W            +LE+ 
Sbjct: 292 IGPRPLGL-------RSEASRESAVVIMNHVNLVEILMDVNQWSTVFCSIVSRAMTLEIL 344

Query: 247 TMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPN 305
           +   AGN  G ++++  +   P+ L P R+ + +RY     +G+  V + SL      P 
Sbjct: 345 STGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHVDGTWAVVDVSLDNLRPSP- 403

Query: 306 PASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS------- 358
                   R+    SGC+I+    G S +  ++H+ ++  SV  + RPL  S        
Sbjct: 404 ------IARSRRRLSGCVIQDLPNGYSKVTWIEHIEVDDRSVHSLYRPLINSGLAFGAKR 457

Query: 359 ---------KVVAQRMTIAETSGE--VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDG 407
                    + +A  M I   +G+  V+     + ++L+  ++R+   F   V       
Sbjct: 458 WVAILDRQCERLASSMAINIPAGDLCVITSPEGRKSMLK-LAERMVMSFCSGVGASTAHA 516

Query: 408 WSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR 467
           W+ ++  G++DV   V + KS+     P       G +LCA  S  L  VPP  + +FL 
Sbjct: 517 WTTLSATGSDDV--RVMTRKSMDDPGRPP------GIVLCAATSFWLP-VPPKRVFQFLS 567

Query: 468 E--HRSEW 473
           +  HRSEW
Sbjct: 568 DENHRSEW 575


>gi|302398859|gb|ADL36724.1| HD domain class transcription factor [Malus x domestica]
          Length = 761

 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 211/518 (40%), Gaps = 95/518 (18%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T EQ+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 110 YHRHTTEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 165

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDR----------------LQKQVSQLVCENGYMK 130
           +R E S L+    KL   +K + E+ ++                L  +  QL  EN  +K
Sbjct: 166 ERHENSLLKGEMEKLRDESKAMREQINKACCPNCGTATTSRDATLTTEEQQLRIENARLK 225

Query: 131 ---QQLRTA-----PATTDASCDSVVTTPQHSLRD------ANNPAGLLSIAEETLAEFL 176
              ++LR A     P T+  SC +       S  D          + ++ I  + + E  
Sbjct: 226 SEVEKLRAALVKYPPGTSSPSCSAGQDQENRSSLDFYTGIFGLEESRIMEIVNQAMEELQ 285

Query: 177 SKATGTAVDWVQMPGMKPG------PDSVGIFAISQSCSG------VAARACGLVSLEPT 224
             AT     WV+   ++ G       + +  F I    +G       A+R  GLV ++  
Sbjct: 286 KMATAGEPLWVR--SVETGREILNYDEYIKEFNIEVPGNGRPKRSIEASRETGLVFVDLP 343

Query: 225 KIAEILKDRPSW--FRDCRSLEVFTMFPAGNA------GTIELLYTQAYAPTTLAPARDF 276
           ++ +   D   W     C   +  T+    N       G ++L++ +    T L P R+ 
Sbjct: 344 RLVQSFMDVNQWKEMFPCMISKAATVDVINNGEGDDRNGAVQLMFAELQMLTPLVPTREV 403

Query: 277 WTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHI 336
           + +R    L      + + S+       +    A  V+    PSGC+I     G   +  
Sbjct: 404 YFVRCCKQLSPEQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIEDKTNGHCKVIW 459

Query: 337 VDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-------------------ETSGEVVYG 377
           V+HL  +  ++  + R +  S      R  +A                   + S  V   
Sbjct: 460 VEHLECQRSTIQTMYRTIVNSGLAFGARHWVATLQLQCERLVFFMATNVPMKDSAGVATL 519

Query: 378 LGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTN 437
            GR+ ++L+  +QR++  F  A+   +   W+ ++    +D+ IA  S K+ +    P  
Sbjct: 520 AGRK-SILK-LAQRMTASFCRAIGASSYHTWTKISSKTGDDIRIA--SRKNSNDPGEP-- 573

Query: 438 SLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
               LG ILCA +S+ L  V P LL  FLR+   R+EW
Sbjct: 574 ----LGVILCAVSSVWLP-VSPYLLFDFLRDETRRNEW 606


>gi|297743262|emb|CBI36129.3| unnamed protein product [Vitis vinifera]
          Length = 750

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 117/521 (22%), Positives = 214/521 (41%), Gaps = 99/521 (19%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+TAEQ+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 98  YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 153

Query: 87  QRKEASRLQTVNRKLTAMNKLLME----------------ENDRLQKQVSQLVCENGYMK 130
           +R E S L++   KL   NK + E                 +  +  +  QL  EN  +K
Sbjct: 154 ERHENSLLKSEMEKLRDENKAMRETIKKSCCPNCGSATSSRDPTMTTEEQQLRIENARLK 213

Query: 131 ---QQLRTA----PATTDASCDSVVTTPQHSLRDANN---------PAGLLSIAEETLAE 174
              ++LR      P  T +   S      H  R +            + ++ I  + + E
Sbjct: 214 AEVEKLRAVIGKYPPGTGSPSSSCSAGNDHENRSSLEFYTGIFGLEKSRIMEIVNQAMEE 273

Query: 175 FLSKATGTAVDWVQMPGMKPGPDSVGI------FAISQSCSG------VAARACGLVSLE 222
               AT     W++   ++ G + +        F++  S +G       A+R  G+V ++
Sbjct: 274 LKKMATAGEPLWIR--SVETGREILNYDEYMREFSVENSGNGRPKRSIEASRETGVVFVD 331

Query: 223 PTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQAYAPTTLAPAR 274
             ++ +   D   W            ++++       N  G ++L++ +    T + P R
Sbjct: 332 LPRLVQSFMDVNQWKEMFPCTISKAATVDIICNGEGPNRNGAVQLMFAELQMLTPMVPTR 391

Query: 275 DFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSII 334
           + + +R+   L      + + S+       +    A  V+    PSGC+I     G   +
Sbjct: 392 EVYFVRFCKQLSADQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIEDKSNGHCKV 447

Query: 335 HIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------------------ETSGEV 374
             V+HL  +  +V  + R +  S      +  IA                    ++SG  
Sbjct: 448 IWVEHLECQKSTVHTMYRQIVNSGLAFGAKHWIATLQLQCERLVFFMATNVPTKDSSG-- 505

Query: 375 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
           V  L  + ++L+  +QR++  F  A+   + + W+ ++    +D+ +A  S K+L+    
Sbjct: 506 VATLAGRKSILK-LAQRMTWSFCRALGASSFNSWTKVSSKTGDDIRVA--SRKNLNDPGE 562

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           P       G ILCA +S+ L  V P ++  FLR+   RSEW
Sbjct: 563 PQ------GVILCAVSSVWLP-VAPHVIFDFLRDEARRSEW 596


>gi|225442611|ref|XP_002284502.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Vitis
           vinifera]
          Length = 754

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 117/521 (22%), Positives = 214/521 (41%), Gaps = 99/521 (19%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+TAEQ+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 102 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 157

Query: 87  QRKEASRLQTVNRKLTAMNKLLME----------------ENDRLQKQVSQLVCENGYMK 130
           +R E S L++   KL   NK + E                 +  +  +  QL  EN  +K
Sbjct: 158 ERHENSLLKSEMEKLRDENKAMRETIKKSCCPNCGSATSSRDPTMTTEEQQLRIENARLK 217

Query: 131 ---QQLRTA----PATTDASCDSVVTTPQHSLRDANN---------PAGLLSIAEETLAE 174
              ++LR      P  T +   S      H  R +            + ++ I  + + E
Sbjct: 218 AEVEKLRAVIGKYPPGTGSPSSSCSAGNDHENRSSLEFYTGIFGLEKSRIMEIVNQAMEE 277

Query: 175 FLSKATGTAVDWVQMPGMKPGPDSVGI------FAISQSCSG------VAARACGLVSLE 222
               AT     W++   ++ G + +        F++  S +G       A+R  G+V ++
Sbjct: 278 LKKMATAGEPLWIR--SVETGREILNYDEYMREFSVENSGNGRPKRSIEASRETGVVFVD 335

Query: 223 PTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQAYAPTTLAPAR 274
             ++ +   D   W            ++++       N  G ++L++ +    T + P R
Sbjct: 336 LPRLVQSFMDVNQWKEMFPCTISKAATVDIICNGEGPNRNGAVQLMFAELQMLTPMVPTR 395

Query: 275 DFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSII 334
           + + +R+   L      + + S+       +    A  V+    PSGC+I     G   +
Sbjct: 396 EVYFVRFCKQLSADQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIEDKSNGHCKV 451

Query: 335 HIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--------------------ETSGEV 374
             V+HL  +  +V  + R +  S      +  IA                    ++SG  
Sbjct: 452 IWVEHLECQKSTVHTMYRQIVNSGLAFGAKHWIATLQLQCERLVFFMATNVPTKDSSG-- 509

Query: 375 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
           V  L  + ++L+  +QR++  F  A+   + + W+ ++    +D+ +A  S K+L+    
Sbjct: 510 VATLAGRKSILK-LAQRMTWSFCRALGASSFNSWTKVSSKTGDDIRVA--SRKNLNDPGE 566

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           P       G ILCA +S+ L  V P ++  FLR+   RSEW
Sbjct: 567 PQ------GVILCAVSSVWLP-VAPHVIFDFLRDEARRSEW 600


>gi|224078678|ref|XP_002305602.1| predicted protein [Populus trichocarpa]
 gi|222848566|gb|EEE86113.1| predicted protein [Populus trichocarpa]
          Length = 725

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 162/750 (21%), Positives = 287/750 (38%), Gaps = 197/750 (26%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR---- 84
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R +    
Sbjct: 60  RYHRHTQRQIQDMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 115

Query: 85  -------------EKQRKEASRLQTVNRKLTAMN--------------KLLMEENDRLQK 117
                        E+ R E +R +   R  +  N              + L  EN RL++
Sbjct: 116 HERSENSILKAENERLRVENNRYKEALRNASCPNCGGPAALGEMSFDEQHLRIENVRLRE 175

Query: 118 QVSQLV-CENGYMKQQLRT----APATTDASCDSVVTT-------------PQHSLRDAN 159
           ++ ++      Y+ + L +    +P     S D  V+                  LR   
Sbjct: 176 EIDRISGIAAKYVGKPLSSLSNLSPHLPSRSLDLGVSNFGAQSGFVGEMFGATDLLRSVT 235

Query: 160 NP-----AGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP---------------GPDSV 199
            P     + ++ IA   + E +  A      W+Q                     GP  +
Sbjct: 236 GPTEADKSMIVEIAVAAMEELMRIAQAGEPLWIQGENNTEMLNEEEYLRTFTRGIGPKPL 295

Query: 200 GIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAG 252
           G+ +        A+R   +V +    + EIL D   W            +LEV +   AG
Sbjct: 296 GMRS-------EASRESAVVIMNHVNLVEILMDANQWSTIFCGIVSRAMTLEVLSTGVAG 348

Query: 253 N-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQ 311
           N  G ++++  +   P+ + P R+ + +RY     +G+  V + SL       +    + 
Sbjct: 349 NYNGALQVMTAEFQVPSPIVPTRENYFVRYCKQHTDGTWAVVDVSL-------DSLRPSL 401

Query: 312 FVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS------------- 358
             +    PSGCLI+    G S +  V+H+ ++  SV  + RPL  S              
Sbjct: 402 LSKCRRRPSGCLIQELPNGYSKVVWVEHIEVDDRSVQNIYRPLVNSGLAFGAKRWVGTLD 461

Query: 359 ---KVVAQRMTIAETSGE---VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMT 412
              + +A  M I   SG+   +    GR+  +    ++R+   F   V       W+ ++
Sbjct: 462 RQCERLASSMAINIPSGDLCVITTAEGRKSML--KLAERMVMSFCTGVGASTAHAWTTLS 519

Query: 413 CDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE--HR 470
             G++DV   V + KS+     P        GI+ + A+     V    +  FLR+  HR
Sbjct: 520 ATGSDDV--RVMTRKSMDDPGRPP-------GIVLSAATSFWIPVQSKRMFDFLRDENHR 570

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 530
           SEW   +    +   ++  ++   G  P            G+ +       ++R+   + 
Sbjct: 571 SEWDILS----NGGEVQEMAHIANGRDP------------GNCV------SLLRVNSANS 608

Query: 531 AQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGF 581
           +Q +  +     L + C+    ++ G  S +++AP+D            PD   LLPSGF
Sbjct: 609 SQSNMLI-----LQESCT----DSTG--SYVIYAPVDISAMNIVLSGGDPDYVALLPSGF 657

Query: 582 RIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFE 641
            I+      PD P   +A         L+VG                 S+LT+AFQ   +
Sbjct: 658 AIL------PDGPGYGSA-------GILDVGSGG--------------SLLTVAFQILVD 690

Query: 642 SNLQDNVATMARQYVRSVIS-SVQRVAMAI 670
           S     ++  +   V S+I  +V+R+  A+
Sbjct: 691 SVPTAKLSLGSVATVNSLIKCTVERIKAAV 720


>gi|224077468|ref|XP_002305259.1| predicted protein [Populus trichocarpa]
 gi|222848223|gb|EEE85770.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 184/442 (41%), Gaps = 89/442 (20%)

Query: 12  QRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEP 71
           + E++S S N+    N  Y R++ +Q+  LE+ + ECP P   +R+QL RE      +E 
Sbjct: 9   EHEAASNSRNQ---GNKAYHRHSNQQIHQLEKFFKECPHPDENQRRQLSREL----GLEA 61

Query: 72  KQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLME----------------EN 112
           KQIK WFQN+R ++K   +R + S L+  N ++   N  ++E                E 
Sbjct: 62  KQIKFWFQNKRTQKKAQSERADNSVLRLENERIQCENLAIIEALKNVICPACGGPPFGEE 121

Query: 113 DRLQKQVSQLVCENGYMKQQLRTAPATTD-----ASCDSVVTTPQHSLRDANNPA----- 162
           +R Q+ + +L  EN  +K++ R + +  D     A     V T    +    NP      
Sbjct: 122 ER-QRSLQKLKQENARLKEEARKSISQIDSLTPGAGSSHGVLTTNPGIDLERNPGLDNSQ 180

Query: 163 ------GLLSIAEETLAEFLSKATGTAVD--------WVQMPG-MKPGPDSVGIFAI--- 204
                 G+L + +  +AE  + A    V         W++ P   +   D VG   +   
Sbjct: 181 LVYKRRGILDMEKALMAETAASAADELVRLLRVNEPLWIKSPSDGRYIIDRVGYEKLYPR 240

Query: 205 -----SQSCSGVAARACGLVSLEPTKIAEILKDRPSWF-------RDCRSLEVFTMFPAG 252
                S +    +++   +V +    + ++  D   W           R++ +      G
Sbjct: 241 DSHFKSSNARVESSKDSAMVIMPGMDLVDMFLDPNKWMDLFPTIVTKARTILLLEAGTVG 300

Query: 253 N-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQ 311
           N  G+++++Y Q +  + L P R+F+ LR    L+ G  V+ + S      G +P+    
Sbjct: 301 NRNGSLQMMYEQMHILSPLVPPREFYFLRLCQQLEPGEWVIADISYDFMRDG-SPS---- 355

Query: 312 FVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS 371
             RA  LPSGC+I+    G S +  V+H+ ++               +    R+      
Sbjct: 356 --RAWRLPSGCMIQDKSNGCSKVTWVEHVEVD--------------DRTQTHRLYRDLIC 399

Query: 372 GEVVYGLGRQPAVLRTFSQRLS 393
           G   YG  R  A LR   +RL+
Sbjct: 400 GRSAYGAERWIASLRRICERLA 421


>gi|356528926|ref|XP_003533048.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 748

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 126/530 (23%), Positives = 212/530 (40%), Gaps = 117/530 (22%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T EQ+  +E ++ E P P   +RQ+L ++      + P+Q+K WFQNRR + K   
Sbjct: 96  YHRHTTEQIREMEALFKESPHPDEKQRQKLSQQL----GLAPRQVKFWFQNRRTQIKALQ 151

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDR----------------LQKQVSQLVCENGYMK 130
           +R E S L+T   KL    K + E  ++                +  +  QL+ EN  +K
Sbjct: 152 ERHENSLLKTELDKLREETKAMRETINKSCCPNCGMVTATIDASMSTEEKQLLIENAKLK 211

Query: 131 ---QQLRTA-----PATTDASCDSVVTTPQHSLRDANNPAG------------LLSIAEE 170
              ++LRTA     P TT  +  S      H   +  N  G            ++ +A  
Sbjct: 212 AEVEKLRTALGKFSPRTTSPTTSSA----GHDEEENRNSLGFYSVLFGLDKSRIMDVANR 267

Query: 171 TLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEIL 230
              E +  AT     WV+   ++ G +   I    +    +AA   G  S  P    E  
Sbjct: 268 ATEELIKMATMGEPLWVR--SVETGRE---ILNYDEYVKEMAAENSG--SERPKTFIEAS 320

Query: 231 KDRPSWFRDC-RSLEVF-------TMFP-----------------AGNAGTIELLYTQAY 265
           ++    F D  R L+ F        MFP                 +   G ++L++ +  
Sbjct: 321 RETEVVFMDLPRLLQSFLDVNQWKEMFPCLISKAVTVDVISNGEGSNRNGAVQLMFAELQ 380

Query: 266 APTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIR 325
             T + P R+ + +R    L +    + + S+       +    A  V+    PSGC+I 
Sbjct: 381 MLTPMVPTREVYFVRCCKQLSDEQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIE 436

Query: 326 PCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------------- 368
               G   +  V+HL  +  ++  + R +  S      R  IA                 
Sbjct: 437 DKSNGHCKVIWVEHLECQKSTIHTMYRTIVNSGLAFGARHWIATLQLHCERLVFYMATNV 496

Query: 369 ---ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
              +++G  V  L  + ++L+  +QR++  F  A+   +   W+++T    ED  I ++S
Sbjct: 497 PMKDSTG--VATLAGRKSILK-LAQRMTWSFCHAIGASSFHTWTMVTSKTGED--IRISS 551

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
            K+L+    P      LG IL A +S+ L  V   +L  FLR+   RSEW
Sbjct: 552 RKNLNDPGEP------LGVILSAVSSVWLP-VSTNVLFDFLRDEARRSEW 594


>gi|109729916|tpg|DAA05772.1| TPA_inf: class IV HD-Zip protein HDZ42 [Selaginella moellendorffii]
          Length = 694

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 135/554 (24%), Positives = 201/554 (36%), Gaps = 121/554 (21%)

Query: 14  ESSSGSINKHQLD----NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNI 69
           E +SG   + Q D      +Y R+T +Q   LE  + ECP P   +RQ+L RE      +
Sbjct: 2   EGASGDDFEDQSDLQASKKRYHRHTVQQTRQLEMFFKECPHPDEKQRQELGREL----GL 57

Query: 70  EPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC----- 124
           EP+Q+K WFQNRR + K   E +     N  L A N+ L  EN  L++ +    C     
Sbjct: 58  EPRQVKFWFQNRRTQMKAHHERAD----NSILRAENENLRTENIALREALKDASCPKCGG 113

Query: 125 -----ENGYMKQQLRTAPA----------------------------------TTDASCD 145
                E  + +QQLR   A                                  T   + D
Sbjct: 114 QLTPGEMSFTEQQLRIENARLRDELNRVSALVAKYITRSAIPLNILPDFPFDITATGTSD 173

Query: 146 SVVTTPQHSLRDANNPAG-------------------LLSIAEETLAEFLSKATGTAVDW 186
           SV       L  A+ P G                   LL +A ET     S   GT    
Sbjct: 174 SVAVP--SILEMASRPGGVTESEKPVIAELAIVAMEELLLVAAETDGALWSSVDGTKEVL 231

Query: 187 VQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW---FRDCRS- 242
            Q    +  P  +G   +       A+R  GLV +    + + + +   W   F +  S 
Sbjct: 232 SQEEYFRQFPRGLGPRLMGMETE--ASRETGLVMMNAAGLIDTIMN-GRWVDMFSNIVSR 288

Query: 243 ---LEVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS 298
               +V T    GN    ++LLY +    + L P R+F+ LRY          + + S+ 
Sbjct: 289 AFTTQVLTTGVGGNWNNALQLLYAELQILSPLVPTREFFFLRYCKQHSERVWAIVDVSID 348

Query: 299 GSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS 358
           G    P P      +R  M PSG  I     G S +  V H+  +      +   L  S 
Sbjct: 349 GLRDNPAPQ-----LRCRMRPSGFFIEDLQNGYSKVTAVQHIEADHRQTENIYHGLVCSG 403

Query: 359 KVVA------------QRMTIAETSGEVVYGLGRQPAV-----LRTFSQRLSRGFNDAVN 401
                           +R+ I  T+      LG  P       +   +QR++  +   V+
Sbjct: 404 AAFGAKRWLAILQRQCERLGIMLTNNISARDLGVIPNANGRRSMLFLAQRMTSNYCAGVS 463

Query: 402 GFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPAL 461
                 W+ ++  G ED  I V + KS++    P        GI+ + A+ L   V    
Sbjct: 464 ASIVHTWTTLSGAGEED--IRVMTRKSVNNPGEPP-------GIVLSAATSLWVPVNSQR 514

Query: 462 LVRFLREH--RSEW 473
           L  FLR+   RSEW
Sbjct: 515 LFEFLRDERLRSEW 528


>gi|109729928|tpg|DAA05778.1| TPA_inf: class IV HD-Zip protein HDZ44 [Physcomitrella patens]
          Length = 809

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 136/581 (23%), Positives = 221/581 (38%), Gaps = 134/581 (23%)

Query: 7   QQQQQQRESSSGSIN-----------KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLR 55
           + ++++  S SGS N            H     +Y R+T  Q++ +E ++ ECP P   +
Sbjct: 85  KNKEEEYGSRSGSDNMEGGSDDDQDADHPPRKKRYHRHTPRQIQEMEMIFKECPHPDDKQ 144

Query: 56  RQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEEN 112
           RQQL ++      + P+Q+K WFQNRR + K   +R E S L+  N K+ A N ++M E 
Sbjct: 145 RQQLSKDL----GLAPRQVKFWFQNRRTQMKAQTERAENSLLRAENEKVRAEN-VIMREA 199

Query: 113 DR---------------LQKQVSQLVCENGYMKQQLRTAPA------------------- 138
            R               +     QL  EN  +K++L    A                   
Sbjct: 200 LRKTQCPHCSVPATVGEMSLDEQQLRVENVRLKEELDRVSALAAKYLGRPIAGMGPVGVG 259

Query: 139 ------------------TTDASCDSV-------VTTPQHSLRDANNPAGLLSIAEETLA 173
                             +   + D V       V T    L +A  P  ++ +A   + 
Sbjct: 260 SSSLELQVGGWLSGVQAGSAGGNADMVQGPSVAEVATRPGGLTEAEKPM-VVELAVAAME 318

Query: 174 EFLSKATGTAVDWVQMPG-----------MKPGPDSVGIFAISQSCSGV---AARACGLV 219
           E +         WV+  G           ++  P  VG+  +    +G+   A+R   LV
Sbjct: 319 ELVRMVQAEEPLWVRAGGGGREELNYEEYVRQFPRVVGM-GMGMKPAGLRTEASRETALV 377

Query: 220 SLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQAYAPTTLA 271
            +    + E L D   W            ++EV +   AGN  G ++L+Y +    + L 
Sbjct: 378 MMNGVNLVETLLDASQWAEMFPCVVSRAVTVEVLSTGVAGNRNGALQLMYAELQVLSPLV 437

Query: 272 PARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGG 331
           P R+ + LRY      G   V + S+      P P+     +R    PSG LI+    G 
Sbjct: 438 PTREVYFLRYCKQHAEGVWGVVDVSVESLRDNPPPS----LMRCRRRPSGVLIQDTPNGY 493

Query: 332 SIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--ETSGEVVYG----------LG 379
           + +  V+H   +  +V  + + L  S      +  +A  E   E V            LG
Sbjct: 494 ARVTCVEHAEYDDRAVHRMYKELVGSGMAFGAQRWVATLERQCERVASLLASNIAPRDLG 553

Query: 380 RQPAV-----LRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
             P+      +   +QR++  F   V+      W+ ++  G +DV   V + KS+     
Sbjct: 554 GVPSASGRRSMLKLAQRMTSNFCAGVSASTAHTWTTLSGSGDDDV--RVMTRKSVDNPGE 611

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           P       G +L A  SM L  V  A +  FLR+   RSEW
Sbjct: 612 PQ------GIVLSAATSMWLA-VSAARVFEFLRDERLRSEW 645


>gi|302773265|ref|XP_002970050.1| hypothetical protein SELMODRAFT_450564 [Selaginella moellendorffii]
 gi|300162561|gb|EFJ29174.1| hypothetical protein SELMODRAFT_450564 [Selaginella moellendorffii]
          Length = 683

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 135/554 (24%), Positives = 202/554 (36%), Gaps = 121/554 (21%)

Query: 14  ESSSGSINKHQLD----NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNI 69
           E +SG   + Q D      +Y R+T +Q   LE ++ ECP P   +RQ+L RE      +
Sbjct: 2   EGASGDDFEDQSDLQASKKRYHRHTVQQTRQLE-MFKECPHPDEKQRQELGREL----GL 56

Query: 70  EPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC----- 124
           EP+Q+K WFQNRR + K   E +     N  L A N+ L  EN  L++ +    C     
Sbjct: 57  EPRQVKFWFQNRRTQMKAHHERAD----NSILRAENENLRTENIALREALKDASCPKCGG 112

Query: 125 -----ENGYMKQQLRTAPA----------------------------------TTDASCD 145
                E  + +QQLR   A                                  T   + D
Sbjct: 113 QLTPGEMSFTEQQLRIENARLRDELNRVSALVAKYITRSAIPLNILPDFPFDITATGTSD 172

Query: 146 SVVTTPQHSLRDANNPAG-------------------LLSIAEETLAEFLSKATGTAVDW 186
           SV       L  A+ P G                   LL +A ET     S   GT    
Sbjct: 173 SVAVP--SILEMASRPGGVTESEKPVIAELAIVAMEELLLVAAETDGALWSSVDGTKEVL 230

Query: 187 VQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW---FRDCRS- 242
            Q    +  P  +G   +       A+R  GLV +    + + + +   W   F +  S 
Sbjct: 231 SQEEYFRQFPRGLGPRLMGMETE--ASRETGLVMMNAAGLIDTIMNVGRWVDMFSNIVSR 288

Query: 243 ---LEVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS 298
               +V T    GN    ++LLY +    + L P R+F+ LRY          + + S+ 
Sbjct: 289 AFTTQVLTTGVGGNWNNALQLLYAELQILSPLVPTREFFFLRYCKQHSERVWAIVDVSID 348

Query: 299 GSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS 358
           G    P P      +R  M PSG  I     G S +  V H+  +      +   L  S 
Sbjct: 349 GLRDNPAPQ-----LRCRMRPSGFFIEDLQNGYSKVTAVQHIEADHRQTENIYHGLVCSG 403

Query: 359 KVVA------------QRMTIAETSGEVVYGLGRQPAV-----LRTFSQRLSRGFNDAVN 401
                           +R+ I  T+      LG  P       +   +QR++  +   V+
Sbjct: 404 AAFGAKRWLAILQRQCERLGIMLTNNISARDLGVIPNANGRRSMLFLAQRMTSNYCAGVS 463

Query: 402 GFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPAL 461
                 W+ ++  G ED  I V + KS++    P        GI+ + A+ L   V    
Sbjct: 464 ASIVHTWTTLSGAGEED--IRVMTRKSVNNPGEPP-------GIVLSAATSLWVPVNSQR 514

Query: 462 LVRFLREH--RSEW 473
           L  FLR+   RSEW
Sbjct: 515 LFEFLRDERLRSEW 528


>gi|224059096|ref|XP_002299713.1| predicted protein [Populus trichocarpa]
 gi|222846971|gb|EEE84518.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 117/530 (22%), Positives = 212/530 (40%), Gaps = 122/530 (23%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR 93
           TAEQ+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K R  A +
Sbjct: 110 TAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKARTLAIQ 165

Query: 94  LQTVNRKLTAMNKLLMEENDRLQKQVSQLVC------------------------ENGYM 129
            +  N  L +    L E+N  +++ +++  C                        EN  +
Sbjct: 166 ERHENSLLKSEMDKLREDNKSMRETINKACCPNCGTATTSRDAALTSTEEQQLRIENAKL 225

Query: 130 KQQL--------RTAPATTDASCDSVVTTPQHSLRD------ANNPAGLLSIAEETLAEF 175
           K ++        +++P  T ASC +       S  D        + + ++  A + + E 
Sbjct: 226 KAEVEKLRAVVGKSSPGAT-ASCSAGNEQENRSSLDFYTGIFGLDKSRIMETANQAMEEL 284

Query: 176 LSKATGTAVDWVQMPGMKPGPDSVG------IFAISQSC-------SGVAARACGLVSLE 222
              AT     W++   ++ G + +       +F    S        S  A+R  G+V ++
Sbjct: 285 KKMATAGEPLWIR--SVETGREILNYDEYTKVFGSEDSSINGRPKRSIEASRETGVVFID 342

Query: 223 PTKIAEILKDRPSWFRDCRSLEVFTMFP-----------------AGNAGTIELLYTQAY 265
             ++ +   D   W           MFP                 A   G ++L++ +  
Sbjct: 343 VPRLVQSFMDVDQWKE---------MFPCLISKAATVDVICNGEGASRNGAVQLMFAEVQ 393

Query: 266 APTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIR 325
             T + P R+ + +RY   L+     + + S+       +    A  V+    PSGC+I 
Sbjct: 394 MLTPMVPTREVYFVRYCKQLNAEQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIE 449

Query: 326 PCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------------- 368
               G   +  V+HL  +  +V  + R +  S      R  +A                 
Sbjct: 450 DKSNGHCKVIWVEHLQCQKSTVHTMYRTVVHSGLTFGARHWMATLQLQCERLVFFMATNV 509

Query: 369 ---ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
              +++G  V  L  + ++L+  +QR++  F  A+   +   W+ ++    ED  I V+S
Sbjct: 510 PTKDSTG--VATLAGRKSILK-LAQRMTWSFCRAICASSYHTWNKVSSKTGED--IRVSS 564

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
            K+L+    P      +G ILCA +S+ L  V P +L  FLR+   R+EW
Sbjct: 565 RKNLNDPGEP------VGVILCAVSSVWLP-VVPHILFDFLRDEARRNEW 607


>gi|302787511|ref|XP_002975525.1| hypothetical protein SELMODRAFT_450555 [Selaginella moellendorffii]
 gi|300156526|gb|EFJ23154.1| hypothetical protein SELMODRAFT_450555 [Selaginella moellendorffii]
          Length = 675

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 163/747 (21%), Positives = 283/747 (37%), Gaps = 200/747 (26%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           ++ R+T  Q++ +E V+ ECP P   +R QL RE      +EP+Q+K WFQNRR + K  
Sbjct: 20  RFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSREL----GLEPRQVKFWFQNRRTQMKVS 75

Query: 87  ----QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC----------ENGYMKQQ 132
               +  +A + +  N  L A N+ L  EN  +++ +    C          E  Y +QQ
Sbjct: 76  IKVFEENQAHQERAENSMLRAENERLRSENIAMREALKNATCPHCGGPATLGEMSYDEQQ 135

Query: 133 LRTAPA-------------------TTDASCDSVVTTPQHSLRD-ANNPAGLLSIAEETL 172
           LR   A                   +   S  ++  TP  S+ + A  P GL  + +  +
Sbjct: 136 LRIENAHLKDEVQLDRVSSLAAKYLSKPPSSSALAVTPGPSMLELATRPGGLSQVEKPLV 195

Query: 173 AEFL------------------------SKATGTAVDWVQMPGMKPGPDSVGIFAISQSC 208
           AE                          +K +    +++Q      GP  VG+       
Sbjct: 196 AELAIIAMEELLALAQSREPLWILEENGAKESLNGEEYMQQFSRGLGPTPVGL------- 248

Query: 209 SGVAARACGLVSLEPTKIAEILKDRPSWFR--DC---RSL--EVFTMFPAGN-AGTIEL- 259
                R  GLV +    + + + D   W     C   R+L  EV +    GN    ++L 
Sbjct: 249 KSEVTRDTGLVMMNGAALVDTIMD-ARWMDMFSCIISRALTSEVLSTGVGGNWNNALQLV 307

Query: 260 LYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLP 319
           +Y +    + L P R+ + LRY      G   + + S+ GSG          F+  +M P
Sbjct: 308 MYAEFQVLSPLVPTREAYFLRYCKQHAEGVWAIVDVSVDGSG----------FLIQDM-P 356

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYES--------------------SK 359
           +G          S + I+ H+  +   V  + R L  S                    + 
Sbjct: 357 NGY------SKVSQVTILQHMEYDDRQVNNMYRGLVSSGLAFGAKRWLATLQRQCERLAV 410

Query: 360 VVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
           ++A  ++  +  G +    GR+  +    +QR++  F   V+      W+ ++  G +DV
Sbjct: 411 LLATNISPRDLGGVISNATGRRSML--KLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDV 468

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHR------SEW 473
              V + KS+     P        GI+ + A+ L   V P  +  FLR+ R      S+W
Sbjct: 469 --RVMTRKSIDNPGEPP-------GIVLSAATSLWMPVSPQRVFEFLRDDRLRSEMNSQW 519

Query: 474 ADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQE 533
              +    +  S++  ++   G  P            G+ I       ++R+   + +Q 
Sbjct: 520 DILS----NGGSVQEMAHIAKGHDP------------GNVI------SLLRVNALNTSQS 557

Query: 534 DAFVSRDIHLLQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRII 584
           +  + ++       S  DE+     S +V+AP+D     +    G      LLPSGF I+
Sbjct: 558 NMLILQE-------SSTDESG----SLIVYAPVDIPAMNLVMQGGDPAYVALLPSGFAIL 606

Query: 585 PLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNL 644
                 P+ P ++                 T P     +S      +LT+AFQ    +  
Sbjct: 607 ------PEGPRSI----------------GTTPETSSRASSGEPGCLLTVAFQILVSNVP 644

Query: 645 QDNVATMARQYVRSVIS-SVQRVAMAI 670
              +   +   V S+IS +VQR+  A+
Sbjct: 645 TAKLNLESVTTVNSLISCTVQRIKTAL 671


>gi|296089063|emb|CBI38766.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 174/766 (22%), Positives = 294/766 (38%), Gaps = 179/766 (23%)

Query: 6   QQQQQQQRESSSGSIN--------KHQLDN----GKYVRYTAEQVEALERVYSECPKPSS 53
           ++ ++ + ES SGS N        +   DN     +Y R+T +Q++ LE ++ ECP P  
Sbjct: 80  RRSREDEHESRSGSDNMDGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDE 139

Query: 54  LRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLME 110
            +R +L R      ++E +Q+K WFQNRR + K   +R E S L+  N KL A       
Sbjct: 140 KQRLELSRRL----SLETRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRA------- 188

Query: 111 ENDRLQKQVSQLVCEN----------GYMKQQLRTAPATTDASCDSV-------VTTPQH 153
           EN  ++  +   +C N             +Q LR   A      D V       +  P  
Sbjct: 189 ENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPIS 248

Query: 154 SLRDANNPA--------------------GLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           SL  +  PA                      L +A   + E +  A      WV+   ++
Sbjct: 249 SLASSMAPAMPSSSLELGVGSNGGISSTSMFLELALAAMDELVKMAQTDEPLWVR--SLE 306

Query: 194 PGPDSVGIFAISQS---CSGV--------AARACGLVSLEPTKIAEILKDRPSW--FRDC 240
            G + + +    ++   C G+        + R  G+V +    + E L D   W     C
Sbjct: 307 GGREILNLEEYMRTFTPCIGMKPSGFVTESTRETGMVIINSLALVETLMDSNRWAEMFPC 366

Query: 241 RSLEVFT--MFPAGNAGT----IELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCE 294
                 T  +  +G  GT    ++L++ +    + L P R+   LR+      G   V +
Sbjct: 367 MIARTSTTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVD 426

Query: 295 RSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPL 354
            S+         + A  FV    LPSGC+++    G S +  V+H   +  +V ++ RPL
Sbjct: 427 VSID---TIRETSVAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESAVHQLYRPL 483

Query: 355 YESS-KVVAQRM-----------------TIAETSGEVVYGLGRQPAVLRTFSQRLSRGF 396
             S     AQR                  T+           G + ++L+  +QR++  F
Sbjct: 484 LGSGMGFGAQRWVATLQRQCECLAILMSSTVPTRDHTAAITAGGRRSMLK-LAQRMTDNF 542

Query: 397 NDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQN 456
              V       W+ + C G  D  + V + KS+     P        GI+ + A+ +   
Sbjct: 543 CAGVCASTVHKWNKL-CAGNVDEDVRVMTRKSVDDPGEPP-------GIVLSAATSVWLP 594

Query: 457 VPPALLVRFLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTI 514
           V P  L  FLR+   RSEW   +    +   ++  ++   G                   
Sbjct: 595 VSPQRLFDFLRDERLRSEWDILS----NGGPMQEMAHIAKGQ------------------ 632

Query: 515 EHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPID----EMF 570
           +H   + ++R    +  Q    +     L + C  +D     A S +V+AP+D     + 
Sbjct: 633 DHGNCVSLLRASAMNANQSSMLI-----LQETC--ID----AAGSLVVYAPVDIPAMHVV 681

Query: 571 PDDG-----PLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSC 625
            + G      LLPSGF I+      PD P +   +  +   S    GP  N  +G     
Sbjct: 682 MNGGDSAYVALLPSGFAIV------PDGPGSRGPNSGVHTNSG---GP--NRVSG----- 725

Query: 626 HHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS-SVQRVAMAI 670
               S+LT+AFQ    S     +   + + V ++IS +VQ++  A+
Sbjct: 726 ----SLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL 767


>gi|224136964|ref|XP_002322460.1| predicted protein [Populus trichocarpa]
 gi|222869456|gb|EEF06587.1| predicted protein [Populus trichocarpa]
          Length = 748

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 191/808 (23%), Positives = 295/808 (36%), Gaps = 219/808 (27%)

Query: 4   VIQQQQQQQRESSSGSIN------------KHQLDNGKYVRYTAEQVEALERVYSECPKP 51
           ++ + ++   ES SGS N             +Q    KY R+TA Q++ LE  + ECP P
Sbjct: 18  LVGRMREDGYESRSGSDNIEGASGEDQDAGDYQRPRKKYNRHTANQIQELESFFKECPHP 77

Query: 52  SSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLL 108
              +R +L R       +E KQIK WFQNRR + K   +R E + L+  N KL A     
Sbjct: 78  DEKQRSELSRRL----GLESKQIKFWFQNRRTQMKTQLERHENAILRQENDKLRA----- 128

Query: 109 MEENDRLQKQVSQLVCEN----------GYMKQQLRTA---------------------P 137
             EN+ L++ +S  +C N           Y +QQLR                       P
Sbjct: 129 --ENELLKQNMSDPICNNCGGPVVPVPVSYEQQQLRIENARLKDELGRVCALANKFLGRP 186

Query: 138 ATTDAS-CDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGP 196
            T+ AS      +  +  L    N  G L   + TL   L    G     V MP MKP  
Sbjct: 187 LTSSASPVPPFGSNTKFDLAVGRNGYGNLGHTDNTLPMGLDNNGG-----VMMPLMKPIG 241

Query: 197 DSVG--------------------IFAISQ---------------------------SCS 209
           ++VG                    +  I+Q                            C 
Sbjct: 242 NAVGNEVPFDRSMFVDLALAAMDELIKIAQVESPIWIKSLDGGKEVLNHEEYMRTFPPCI 301

Query: 210 GV--------AARACGLVSLEPTKIAEILKDRPSWFRDCRSL----EVFTMFPAGNAGT- 256
           G+        A R  G+V      + E L D   W     SL        +  +G  GT 
Sbjct: 302 GMKPSNFVIEATRESGVVLANSLDLVETLMDVNGWVEMFPSLIARAATIDIVSSGMGGTK 361

Query: 257 ---IELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
              +++++ +    +   P R    LR    L  G   V + S+ G+    N   A   V
Sbjct: 362 SGALQMIHAEFQVISPFVPVRQVKFLRLCKQLAEGVWAVADVSVDGNQENLN---AQTPV 418

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS-KVVAQR-------- 364
               LPSGC+I+  + G   +  V+H   +  +V  + R +  S     AQR        
Sbjct: 419 TCRRLPSGCIIQDMNNGCCKVTWVEHSEYDESAVHRLYRHILNSGMGFGAQRWIAALQRH 478

Query: 365 -----MTIAET---SGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDG- 415
                M ++ T     + V  LG + ++L+  ++R+   F   V       W  +  +  
Sbjct: 479 YECMAMLLSPTILGEDQTVINLGGKKSMLK-LARRMVDSFCSGVCASTLHNWGNLVVESV 537

Query: 416 AEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           +EDV I   + K ++    P        GI+ + ++ +   V    L  FLR+   RS+W
Sbjct: 538 SEDVRIL--TRKIINEPGEPD-------GIVLSVSTSVWLPVSQQRLFDFLRDEQSRSQW 588

Query: 474 ADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQE 533
                D  S   +                   + +P G    H   + V+R         
Sbjct: 589 -----DILSNGGILQ---------------EMVQIPKGQG--HWNTVSVLR-----STAV 621

Query: 534 DAFVSRDIHLLQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRII 584
           DA  S ++ +LQ       N V   S +V+AP+D     +  + G      LLPSGF I+
Sbjct: 622 DANASDNMLILQETW----NDVSG-SLVVYAPVDVQSVSVVMNGGDSTYVALLPSGFVIL 676

Query: 585 PLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNL 644
           P +S +   P+                    NPA  D        S LT+ FQ    SNL
Sbjct: 677 PGNSFSNGEPNNCNG----------------NPAKRDCDGNSGGGSFLTVGFQI-LASNL 719

Query: 645 QDNVATM-ARQYVRSVIS-SVQRVAMAI 670
                T+ + + V ++IS ++QR+  A 
Sbjct: 720 PSAKLTVESVKTVHNLISCTMQRIKTAF 747


>gi|357453443|ref|XP_003596998.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355486046|gb|AES67249.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 774

 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 143/681 (20%), Positives = 260/681 (38%), Gaps = 164/681 (24%)

Query: 10  QQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNI 69
           + Q  ++SG   + +    +Y R+T  Q++ +E  + ECP P   +R++L RE      +
Sbjct: 88  ENQEAANSGEDQEPRAKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GL 143

Query: 70  EPKQIKVWF----------QNRRCREKQRKEASRLQTVNRKL---------------TAM 104
           EP Q+K WF          Q R      R E  +L+  N +                TA+
Sbjct: 144 EPLQVKFWFQNKRTQMKTQQERHENTSLRTENEKLRADNMRFREALSNASCPNCGGPTAI 203

Query: 105 NKL------LMEENDRLQKQVSQL-VCENGYMKQQLRTAPATTDASC------------- 144
            ++      L  EN RL++++ ++      Y+ + + + P  + +S              
Sbjct: 204 GEMSFDEHHLRIENSRLREEIDRISAIAAKYVGKPVVSYPLLSPSSVPPRPLELGIGGFG 263

Query: 145 -----DSVVTTPQHSLRDANNPAG-----LLSIAEETLAEFLSKATGTAVDWVQMPGMKP 194
                   +      LR  + P       ++ +A   + E +  A      W  +P ++ 
Sbjct: 264 GQPGMGGDMYGAGDLLRSISGPTEADKPMIIELAVAAMEELIGMAQMGDPLW--LPTLEG 321

Query: 195 G------------PDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW------ 236
           G            P  +G       C   A+R   +V +    + EIL D   W      
Sbjct: 322 GSILNEEEYVRSFPRGIGPKPAGFKCE--ASRESSVVIMNHVNLVEILMDVNQWSTVFSG 379

Query: 237 -FRDCRSLEVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCE 294
                 +LEV +   AGN  G ++++  +   P+ L P R+ + +RY     +G+  V +
Sbjct: 380 IVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVD 439

Query: 295 RSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPL 354
            SL      P+P++     R+   PSGCLI+    G S +  V+H+ ++   V  + + L
Sbjct: 440 VSLDN--LRPSPSA-----RSRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQL 492

Query: 355 YESSKVVAQRMTIAETS-------------------GEVVYGLGRQPAVLRTFSQRLSRG 395
             S      +  IA                      G +    GR+   +   ++R+   
Sbjct: 493 VSSGHAFGAKRWIATLDRQCERLASAMATNIPTVDVGVITNQDGRKS--MLKLAERMCIS 550

Query: 396 FNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQ 455
           F   V+      W+ ++  GA+DV   V + KS+     P        GI+ + A+    
Sbjct: 551 FCAGVSASTAHTWTTLSGTGADDV--RVMTRKSVDDPGRP-------AGIVLSAATSFWL 601

Query: 456 NVPPALLVRFLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHT 513
            VPP  +  FLR+   RSEW   +    +   ++  ++   G    R TG+         
Sbjct: 602 PVPPKRVFEFLRDENSRSEWDILS----NGGVVQEMAHIANG----RDTGN--------- 644

Query: 514 IEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF--- 570
                 + ++R+   + +Q +  +     L + C+          S +++AP+D +    
Sbjct: 645 -----CVSLLRVNSANSSQSNMLI-----LQESCTDT------TGSFVIYAPVDIVAMNV 688

Query: 571 ------PDDGPLLPSGFRIIP 585
                 PD   LLPSGF I+P
Sbjct: 689 VLNGGDPDYVALLPSGFAILP 709


>gi|242095072|ref|XP_002438026.1| hypothetical protein SORBIDRAFT_10g006820 [Sorghum bicolor]
 gi|241916249|gb|EER89393.1| hypothetical protein SORBIDRAFT_10g006820 [Sorghum bicolor]
          Length = 700

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 118/552 (21%), Positives = 204/552 (36%), Gaps = 122/552 (22%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q    +Y R+T  Q++ LE ++ ECP P   +R  L RE      +EP+QIK WFQNRR 
Sbjct: 13  QRQRKRYHRHTPRQIQQLEAMFKECPHPDENQRAALSREL----GLEPRQIKFWFQNRRT 68

Query: 84  REKQ----------RKEASRLQTVN---------------------------RKLTAMNK 106
           + K           R E  +++  N                           +KL   N 
Sbjct: 69  QMKAQHERADNCFLRAENDKIRCENITMREALKNVICPNCGGPPVAEDFFDEQKLRMENA 128

Query: 107 LLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD-SVVTTPQHSLRDANNPA--- 162
            L EE DR+    S+ +   G    Q+   P  + +S D S+   P         P+   
Sbjct: 129 RLKEELDRVSSITSKYL---GRPFTQMPPVPTMSMSSLDLSMGGMPGQQGHLGGPPSLDL 185

Query: 163 ------------------------GLLSIAEETLAEFLSKATGTAVDWVQ-MPGMKPGPD 197
                                    ++ +A   + E +  A      WV+ MPG      
Sbjct: 186 DLLSGCSSGMPYQMPAPVTEMERPMMVDMATRAMDELIRLAQAGDQIWVKGMPGDAREML 245

Query: 198 SVGIFAISQSCSGVA----------ARACGLVSLEPTKIAEILKDRPSWFR-------DC 240
           +V  +    S  GVA          +R  GLV +    + ++  D   W           
Sbjct: 246 NVATYDSLFSKPGVAFRPPDMNVEGSRDSGLVFMSAVALVDVFMDTNKWMEFFPGIVSKA 305

Query: 241 RSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS 300
           ++++V      G + ++ ++Y + +  T + P R+   LRY   ++ G   + + SL G 
Sbjct: 306 QTVDVLVNGLGGRSESLIMMYEELHIMTPVVPTRELSFLRYCKQIEQGLWAIADVSLDGQ 365

Query: 301 GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLE----------------- 343
                 A      R+  +PSGCLI     G S +  V+H+ +E                 
Sbjct: 366 ----RDAHYGMPSRSRRMPSGCLIADMSNGYSKVTWVEHMEIEQMLPINVLYRNLVLSGA 421

Query: 344 AWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGF 403
           A+     L  L  + +  A   T+     ++          +   SQR+   F  +++  
Sbjct: 422 AFGAHRWLAALQRACERFASVATLGVPHHDIAGVTPEGKRSMMKLSQRMVGSFCASLSSS 481

Query: 404 NDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLV 463
               W+L++  G  DV + V++ +S  +   P        G++ + A+ +   VP   + 
Sbjct: 482 PLQRWTLLS--GTTDVSVRVSTHRSTDSGGQPN-------GVVLSAATSIWLPVPGDHVF 532

Query: 464 RFLREH--RSEW 473
            F+R+   RS+W
Sbjct: 533 AFVRDENARSQW 544


>gi|45593105|gb|AAS68141.1| homeodomain leucine zipper protein 29 [Oryza sativa Japonica Group]
          Length = 93

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/95 (50%), Positives = 66/95 (69%), Gaps = 2/95 (2%)

Query: 452 MLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLG 511
           MLLQ+V P  L++FLREHRS+WAD N+DA+ A+++K      P  R   F+G Q+I+PL 
Sbjct: 1   MLLQDVSPPSLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSRLGGFSG-QVILPLA 59

Query: 512 HTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQI 546
           HT E EE LEVI+L G++   +D  V RD+ LLQ+
Sbjct: 60  HTFEPEEFLEVIKL-GNASNYQDTLVHRDLFLLQM 93


>gi|356497482|ref|XP_003517589.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 731

 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 157/749 (20%), Positives = 271/749 (36%), Gaps = 197/749 (26%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR----- 84
           Y R+T  Q+E +E  + +CP P   +R++L RE      +EP Q+K WFQN+R +     
Sbjct: 66  YRRHTQRQIEEMEAFFKQCPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQH 121

Query: 85  ------------EKQRKEASRLQTV---------------------NRKLTAMNKLLMEE 111
                       EK R E SR +                        + L   N  L EE
Sbjct: 122 ERNENAILKAENEKLRAENSRYKEALTNATCPNCGGPAALGEMSFDEQHLRIENARLREE 181

Query: 112 NDRLQKQVSQLVCE------NGYMKQQLRTAPATTDASCDSVVTT---------PQHSLR 156
            DR+    ++ V +      +          P     S    V           P  +  
Sbjct: 182 IDRISGIAAKYVGKPVTSSYSNLSSLNNNHVPVGNYGSQSGTVGEMYGGSDLFRPLPAPA 241

Query: 157 DANNPAGLLSIAEETLAEFLSKATGTAVDWV----------------QMPGMKPGPDSVG 200
           DA+ P  ++ +A   + E    A      WV                  P    GP  +G
Sbjct: 242 DADKPM-IVELAVAAMEELTRLAQAGEPLWVPSNHHSEILNEDEYLRTFPTRGLGPKPLG 300

Query: 201 IFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN 253
           + +        A+R   +V +    + +IL D   W            +LEV +   AGN
Sbjct: 301 LRS-------EASRESVVVIMNHINLIDILMDVNQWSTVFCGIVSRALTLEVLSTGIAGN 353

Query: 254 -AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
             G ++++ ++    + L P R+ + +RY     +G   V + SL            +  
Sbjct: 354 YNGALQVMSSEFQVASPLVPTRENYFVRYCKQQPDGIWAVVDVSLDN-------LRPSTI 406

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSG 372
            R+   PSGCLI+    G S +  ++H+ ++  +V  + R L  S      +  +A    
Sbjct: 407 SRSRRRPSGCLIQELPNGYSKVTWIEHVEVDDRAVHSIYRTLVNSGLAFGAKRWVATLER 466

Query: 373 E-------------------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTC 413
           +                   +    GR+   +   ++R+   +   V       W+ ++ 
Sbjct: 467 QCERLASSMANNIPAGDLCVITSAEGRKS--MMKLAERMVMSYCTGVGASTAHAWTTLSA 524

Query: 414 DGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RS 471
            G +DV   V + KS      P        GI+ + A+     VPP  +  FLR+   R+
Sbjct: 525 TGCDDV--RVMTRKSTDEPGRPP-------GIVLSAATSFWLPVPPKRVFHFLRDQNSRN 575

Query: 472 EWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLA 531
           EW     D  S   L                  Q +  + +  +    + ++R+   + +
Sbjct: 576 EW-----DILSNGGL-----------------VQELAHIANGRDPGNCVSLLRVNSANSS 613

Query: 532 QEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFR 582
           Q +  +     L + C+    ++ G  S +V+AP+D +          PD   LLPSGF 
Sbjct: 614 QSNMLI-----LQESCT----DSTG--SYVVYAPVDIVAMNVVLSGGDPDYVALLPSGFA 662

Query: 583 IIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFES 642
           I+      PD P  L              GP  +  +G         S+LT+AFQ   +S
Sbjct: 663 IL------PDGPPALNG------------GPIHDVGSGG--------SLLTVAFQILVDS 696

Query: 643 NLQDNVATMARQYVRSVIS-SVQRVAMAI 670
                ++  +   V S+I  +V+R+ +A+
Sbjct: 697 APTAKLSLGSVATVNSLIKCTVERIKVAV 725


>gi|356524732|ref|XP_003530982.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 721

 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 120/559 (21%), Positives = 209/559 (37%), Gaps = 141/559 (25%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR------ 82
           +Y R+TA Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR      
Sbjct: 27  RYHRHTANQIQRLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 82

Query: 83  ------CREKQRKEASRLQTV--------------------------NRKLTAMNKLLME 110
                 C  +   +  R + +                          ++KL   N  L E
Sbjct: 83  HERADNCALRADNDKIRCENIAIREALKNVICPSCGAPPLNDDCYFDDQKLRLENAHLKE 142

Query: 111 ENDRLQK-------------------QVSQLVCENGYMKQQLRTAPATTDASCD------ 145
           E DR+                      +S L         Q    PA +  + D      
Sbjct: 143 ELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMASYGNQGMVGPAPSSLNLDLLPAAG 202

Query: 146 -SVVTTPQHSLRDANNPAGLLS-IAEETLAEFLSKATGTAVDWVQ--------------- 188
            S  + P H    ++    L+S IA   + EFL         W++               
Sbjct: 203 TSSSSMPYHPPCLSDMDKSLMSDIASNAMEEFLRLVQTNEPLWLKSNVDARDVLSCDAYE 262

Query: 189 ----MPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFR------ 238
                P  +P   +V I          A+R  G+V +    + ++  D   W +      
Sbjct: 263 RMFHKPNTRPKNPNVRI---------EASRDSGVVLMNTLALVDMFMDPNKWIQLFPTIV 313

Query: 239 -DCRSLEVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERS 296
              R+++V +    G+ +G+++L+Y +    + L   R+F+ LRY   ++ G+  V + S
Sbjct: 314 SVARTIQVISSGMMGSCSGSLQLMYQELQVLSPLVSTREFYFLRYCQQIEQGTWAVMDVS 373

Query: 297 LSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL--RPL 354
                  P  +  A   R+   PSGCLI+    G S I  V+H+ +E  ++P  L    +
Sbjct: 374 YDF----PQDSHYAPQFRSHRCPSGCLIQDMPDGHSKITWVEHVEIEDKTLPHRLYRNLI 429

Query: 355 YESSKVVAQR---------------MTIAETSGEVVYGLGRQPAVLRT---FSQRLSRGF 396
           Y      A+R               M  +  + + + G+   P   R+    +QR+   F
Sbjct: 430 YSGMAFGAERWLTTLQRMCERLTYLMATSNPTRDNLGGVISSPEGKRSMMKLAQRMVTNF 489

Query: 397 NDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQN 456
              ++  +   W+  T  G  ++++ V   KS    S+P        G++ + A+ +   
Sbjct: 490 CANISTSSGHRWT--TLSGLNEIVVRVTVHKS----SDPGQP----NGVVLSAATTIWLP 539

Query: 457 VPPALLVRFLREH--RSEW 473
            PP  +  F ++   R +W
Sbjct: 540 TPPHAVFNFFKDENKRPQW 558


>gi|449448174|ref|XP_004141841.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 738

 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 122/519 (23%), Positives = 209/519 (40%), Gaps = 99/519 (19%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QR 88
           R+T+EQ+  +E ++ E P P   +RQQL  +      +  KQIK WFQNRR + K   +R
Sbjct: 88  RHTSEQIREMEMLFKESPHPDEKQRQQLSEKL----GLSCKQIKFWFQNRRTQIKAIHER 143

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRL---------------------QKQVSQLVCENG 127
            E + L+    KL   N+ + E   +                       +Q  QLV E  
Sbjct: 144 HENALLKGEMEKLREENQAMREMISKSSCTKGCCSASTNSLDAIFTTSDQQQQQLVTEIA 203

Query: 128 YMK---QQLRTA-----PATTDASCDSV-VTTPQHSLRDANNPAGL-----LSIAEETLA 173
            +K   ++LRTA     PA T+ + +   +  P  +L  + +  GL     + I +  + 
Sbjct: 204 RLKAEVERLRTALDKYAPAGTENNKEEGGIERPGRNLEKSKSIFGLEKGRVMLIGKRAIE 263

Query: 174 EFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSG---------VAARACGLVSLEPT 224
           E +         WV+   ++ G + +      +  +           A+R  G+V  +  
Sbjct: 264 EVVKMGDSDEPLWVR--SVETGRELLNYDVYMKELAVGNERGKREVEASRETGVVFADLH 321

Query: 225 KIAEILKDR-------PSWFRDCRSLEVFTMFPAGNA-GTIELLYTQAYAPTTLAPARDF 276
           ++ +   D        PS      ++EV       N  G ++L++ +    T   P R+ 
Sbjct: 322 RLVQSFMDVVQWKEMFPSMISKASTMEVVFNGDGNNRDGAVQLMFAELQMLTPTIPPREI 381

Query: 277 WTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHI 336
           + +R    L  G  VV + S+   G   + +S+    R    PSGC+I+    G   +  
Sbjct: 382 FFIRSCKQLSPGKWVVADVSIDKVGDHVDSSSS----RCRKRPSGCIIQDQSDGHCKVTW 437

Query: 337 VDHLNLEAWSVPEVLRPLYESSKV--------------------VAQRMTIAETSGEVVY 376
           V+H       +  + R +  S  +                    +A  + + +++G  + 
Sbjct: 438 VEHWECHKIGLHTIYRTIVNSGLIFGATHWMSTLQMHCEWQVFFMATNVPMKDSTG--IT 495

Query: 377 GLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPT 436
            +G + +VLR  +QR++     A+   N   W+ +     E + IA  S K+L     PT
Sbjct: 496 TVGGRKSVLR-LAQRMTSSIYQAIGASNSHTWTKVQSKIGETIRIA--SRKNLKNPHEPT 552

Query: 437 NSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
                 G ILCA AS+ L  V P LL  FL +   R EW
Sbjct: 553 ------GLILCAVASIWLP-VSPKLLFEFLIDEARRPEW 584


>gi|449519629|ref|XP_004166837.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 738

 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 122/519 (23%), Positives = 209/519 (40%), Gaps = 99/519 (19%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QR 88
           R+T+EQ+  +E ++ E P P   +RQQL  +      +  KQIK WFQNRR + K   +R
Sbjct: 88  RHTSEQIREMEMLFKESPHPDEKQRQQLSEKL----GLSCKQIKFWFQNRRTQIKAIHER 143

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRL---------------------QKQVSQLVCENG 127
            E + L+    KL   N+ + E   +                       +Q  QLV E  
Sbjct: 144 HENALLKGEMEKLREENQAMREMISKSSCTKGCCSASTNSLDAIFTTSDQQQQQLVTEIA 203

Query: 128 YMK---QQLRTA-----PATTDASCDSV-VTTPQHSLRDANNPAGL-----LSIAEETLA 173
            +K   ++LRTA     PA T+ + +   +  P  +L  + +  GL     + I +  + 
Sbjct: 204 RLKAEVERLRTALDKYAPAGTENNKEEGGIERPGRNLEKSKSIFGLEKGRVMLIGKRAIE 263

Query: 174 EFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSG---------VAARACGLVSLEPT 224
           E +         WV+   ++ G + +      +  +           A+R  G+V  +  
Sbjct: 264 EVVKMGDSDEPLWVR--SVETGRELLNYDVYMKELAVGNERGKREVEASRETGVVFADLH 321

Query: 225 KIAEILKDR-------PSWFRDCRSLEVFTMFPAGNA-GTIELLYTQAYAPTTLAPARDF 276
           ++ +   D        PS      ++EV       N  G ++L++ +    T   P R+ 
Sbjct: 322 RLVQSFMDVVQWKEMFPSMISKASTMEVVFNGDGNNRDGAVQLMFAELQMLTPTIPPREI 381

Query: 277 WTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHI 336
           + +R    L  G  VV + S+   G   + +S+    R    PSGC+I+    G   +  
Sbjct: 382 FFIRSCKQLSPGKWVVADVSIDKVGDHVDSSSS----RCRKRPSGCIIQDQSDGHCKVTW 437

Query: 337 VDHLNLEAWSVPEVLRPLYESSKV--------------------VAQRMTIAETSGEVVY 376
           V+H       +  + R +  S  +                    +A  + + +++G  + 
Sbjct: 438 VEHWECHKIGLHTIYRTIVNSGLIFGATHWMSTLQMHCEWQVFFMATNVPMKDSTG--IT 495

Query: 377 GLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPT 436
            +G + +VLR  +QR++     A+   N   W+ +     E + IA  S K+L     PT
Sbjct: 496 TVGGRKSVLR-LAQRMTSSIYQAIGASNSHTWTKVQSKIGETIRIA--SRKNLKNPHEPT 552

Query: 437 NSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
                 G ILCA AS+ L  V P LL  FL +   R EW
Sbjct: 553 ------GLILCAVASIWLP-VSPKLLFEFLIDEARRPEW 584


>gi|449439589|ref|XP_004137568.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
 gi|449517265|ref|XP_004165666.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
          Length = 705

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 146/670 (21%), Positives = 250/670 (37%), Gaps = 169/670 (25%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+ A Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 23  RYHRHNANQIQRLEAMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 78

Query: 87  -QRKEASRLQTVN----------------------------------RKLTAMNKLLMEE 111
            +R + S L+  N                                   KL   N  L EE
Sbjct: 79  HERADNSALRAENDKIRCENIAIREALKNVICPSCGGPPLQDPYFDEHKLRIENAHLKEE 138

Query: 112 NDRLQ--------KQVSQL------------VCENGYMKQQLRTAPATTD---ASCDSVV 148
            DR+         + +SQL            +    +  Q++       D   AS  SV 
Sbjct: 139 LDRVSSIAAKYIGRPISQLPPIQPSHFSSLELSMGSFPSQEMGCPSLDLDLLSASSTSVP 198

Query: 149 TTP-QHSLRDANNPAGLLS-IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQ 206
             P  H +  +     L++ IA   +AE L  +      W++ P    G D + +     
Sbjct: 199 NLPYHHPIHLSTVDKSLMTEIATNAMAELLRLSQTNEPFWMKSP--TDGRDLLDLETYEH 256

Query: 207 SC------------SGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFT 247
           +                A+R  G+V +    + +I  D   W           R+LEV +
Sbjct: 257 AFPRPNTPLKNLHFRTEASRDSGVVIISSAALVDIFMDSNKWTELFPTIVSVARTLEVVS 316

Query: 248 MFPAGNA-GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNP 306
               G+  G+++L+Y +    + L P R F+ +RY   ++ G   V + S +     P  
Sbjct: 317 SGMLGSQNGSLQLMYQELQLLSPLVPTRHFYFIRYCQQIEQGVWAVVDVSYN----IPRE 372

Query: 307 ASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLE-----------------AWSVPE 349
                  +    PSGCLI+    G S +  ++H+ +E                 A+    
Sbjct: 373 NQIVSHPQCHRFPSGCLIQDMPNGYSKVTWIEHVEVEDRGSTHWLFRDLIHSGLAFGAER 432

Query: 350 VLRPLYESSKVVAQRMTIAETS---GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDD 406
            L  L   S+  A  M  + ++   G V+  L  + ++++  +QR+   F  +++  +  
Sbjct: 433 WLATLQRMSERFACLMVTSSSNQDLGGVIPSLEGKRSMMK-LAQRMVNNFCASISTSHGH 491

Query: 407 GWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFL 466
            W+  T  G  +V + V   K  ST S   N      G++ + A+ +   V P  +  F 
Sbjct: 492 RWT--TLSGMNEVGVRVTVHK--STDSGQPN------GVVLSAATTIWLPVSPQTIFNFF 541

Query: 467 REH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIR 524
           +    RS+W   +            + ++PG                        + V+R
Sbjct: 542 KNDRTRSQWDVLSEGNPVQEVAHISNGSHPG----------------------NCISVLR 579

Query: 525 LEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPID---------EMFPDDGP 575
             G + +Q +  + ++       S +D +     S +V+ P+D            P   P
Sbjct: 580 --GFNTSQNNMLILQE-------SCIDSSG----SLVVYCPVDLPAMNVAMSGEDPSSIP 626

Query: 576 LLPSGFRIIP 585
           LLPSGF I+P
Sbjct: 627 LLPSGFTILP 636


>gi|357453445|ref|XP_003596999.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355486047|gb|AES67250.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 787

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 142/693 (20%), Positives = 262/693 (37%), Gaps = 175/693 (25%)

Query: 10  QQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNI 69
           + Q  ++SG   + +    +Y R+T  Q++ +E  + ECP P   +R++L RE      +
Sbjct: 88  ENQEAANSGEDQEPRAKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GL 143

Query: 70  EPKQIKVWF----------QNRRCREKQRKEASRLQTVNRKL---------------TAM 104
           EP Q+K WF          Q R      R E  +L+  N +                TA+
Sbjct: 144 EPLQVKFWFQNKRTQMKTQQERHENTSLRTENEKLRADNMRFREALSNASCPNCGGPTAI 203

Query: 105 NKL------LMEENDRLQKQVSQL-VCENGYMKQQLRTAPATTDASC------------- 144
            ++      L  EN RL++++ ++      Y+ + + + P  + +S              
Sbjct: 204 GEMSFDEHHLRIENSRLREEIDRISAIAAKYVGKPVVSYPLLSPSSVPPRPLELGIGGFG 263

Query: 145 -----DSVVTTPQHSLRDANNPAG-----LLSIAEETLAEFLSKATGTAVDWVQMPGMKP 194
                   +      LR  + P       ++ +A   + E +  A      W  +P ++ 
Sbjct: 264 GQPGMGGDMYGAGDLLRSISGPTEADKPMIIELAVAAMEELIGMAQMGDPLW--LPTLEG 321

Query: 195 G------------PDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW------ 236
           G            P  +G       C   A+R   +V +    + EIL D   W      
Sbjct: 322 GSILNEEEYVRSFPRGIGPKPAGFKCE--ASRESSVVIMNHVNLVEILMDVNQWSTVFSG 379

Query: 237 -FRDCRSLEVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCE 294
                 +LEV +   AGN  G ++++  +   P+ L P R+ + +RY     +G+  V +
Sbjct: 380 IVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVD 439

Query: 295 RSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPL 354
            SL      P+P++     R+   PSGCLI+    G S +  V+H+ ++   V  + + L
Sbjct: 440 VSLDN--LRPSPSA-----RSRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQL 492

Query: 355 YESSKVVAQRMTIAETSGE-------------------------------VVYGLGRQPA 383
             S      +  IA    +                               V+     + +
Sbjct: 493 VSSGHAFGAKRWIATLDRQCERLASAMATNIPTVDMEFFMINEHYDIVMLVITNQDGRKS 552

Query: 384 VLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLG 443
           +L+  ++R+   F   V+      W+ ++  GA+DV   V + KS+     P        
Sbjct: 553 MLK-LAERMCISFCAGVSASTAHTWTTLSGTGADDV--RVMTRKSVDDPGRP-------A 602

Query: 444 GILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRF 501
           GI+ + A+     VPP  +  FLR+   RSEW   +    +   ++  ++   G    R 
Sbjct: 603 GIVLSAATSFWLPVPPKRVFEFLRDENSRSEWDILS----NGGVVQEMAHIANG----RD 654

Query: 502 TGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSEL 561
           TG+               + ++R+   + +Q +  +     L + C+          S +
Sbjct: 655 TGN--------------CVSLLRVNSANSSQSNMLI-----LQESCTDT------TGSFV 689

Query: 562 VFAPIDEMF---------PDDGPLLPSGFRIIP 585
           ++AP+D +          PD   LLPSGF I+P
Sbjct: 690 IYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 722


>gi|302783435|ref|XP_002973490.1| hypothetical protein SELMODRAFT_450557 [Selaginella moellendorffii]
 gi|300158528|gb|EFJ25150.1| hypothetical protein SELMODRAFT_450557 [Selaginella moellendorffii]
          Length = 684

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 125/564 (22%), Positives = 205/564 (36%), Gaps = 150/564 (26%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           ++ R+T  Q++ +E V+ ECP P   +R QL RE      +EP+Q+K WFQNRR + K  
Sbjct: 74  RFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSREL----GLEPRQVKFWFQNRRTQMKVS 129

Query: 87  ----QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC----------ENGYMKQQ 132
               +  +A + +  N  L A N+ L  EN  +++ +    C          E  Y +QQ
Sbjct: 130 IKVFEENQAHQERAENSMLRAENERLRSENIAMREALKNATCPHCGGPATLGEMSYDEQQ 189

Query: 133 LR-----------------------------------------------TAPATTDASCD 145
           LR                                               +A A    S  
Sbjct: 190 LRIENAHLKDEVQLDRVSSLAAKYLSKPGGGAPHGLSVQTSLPGTSLDPSAAAFGPQSNS 249

Query: 146 SVVTTPQHSLRD-ANNPAGLLSIAEETLAEFL------------------------SKAT 180
           ++  TP  S+ + A  P GL  + +  +AE                          +K +
Sbjct: 250 ALAVTPGPSMLELATRPGGLSQVEKPLVAELAIIAMEELLALAQSREPLWILEENGAKES 309

Query: 181 GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFR-- 238
               +++Q      GP  VG+ A          R  GLV +    + + + D   W    
Sbjct: 310 LNGEEYMQQFSRGLGPTPVGLKA-------EVTRDTGLVMMNGAALVDTIMD-ARWMDMF 361

Query: 239 DC---RSL--EVFTMFPAGN-AGTIEL-LYTQAYAPTTLAPARDFWTLRYTTTLDNGSLV 291
            C   R+L  EV +    GN    ++L +Y +    + L P R+ + LRY      G   
Sbjct: 362 SCIISRALTSEVLSTGVGGNWNNALQLVMYAEFQVLSPLVPTREAYFLRYCKQHAEGVWA 421

Query: 292 VCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGG------GSIIHIVDHLNLEAW 345
           + + S+ G    P P      +R  + PSG LI+    G      G  + I+ H+  +  
Sbjct: 422 IVDVSVDGLRENPPPQ-----LRNRLRPSGFLIQDMPNGYSKVSHGFQVTILQHMEYDDR 476

Query: 346 SVPEVLRPLYESSKVVAQRMTIAETS-------------------GEVVYGLGRQPAVLR 386
            V  + R L  S      +  +A                      G +    GR+  +  
Sbjct: 477 QVNNMYRGLVSSGLAFGAKRWLATLQRQCERLAVLLATNISPRDLGGISNATGRRSML-- 534

Query: 387 TFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGIL 446
             +QR++  F   V+      W+ ++  G +DV   V + KS+     P        GI+
Sbjct: 535 KLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDV--RVMTRKSIDNPGEPP-------GIV 585

Query: 447 CAKASMLLQNVPPALLVRFLREHR 470
            + A+ L   V P  +  FLR+ R
Sbjct: 586 LSAATSLWMPVSPQRVFEFLRDDR 609


>gi|345195186|tpg|DAA34958.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414880175|tpg|DAA57306.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 701

 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 122/538 (22%), Positives = 207/538 (38%), Gaps = 136/538 (25%)

Query: 4   VIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIREC 63
           V +++++  R+   G   K  L      R T++Q+E LE  +S C  P   +R+QL    
Sbjct: 93  VKKKKKRSDRQQQDGPQPKKLLH-----RVTSQQLEILEGFFSICAHPDDSQRKQLSES- 146

Query: 64  PILSNIEPKQIKVWFQNRRCREKQ---RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
              + +   Q+K WFQN+R   K    R+E       N +L   N++L EEN+RL +Q  
Sbjct: 147 ---TGLSVHQVKFWFQNKRTHVKHLSGREE-------NYRLKVENEMLKEENNRLIRQAQ 196

Query: 121 ------------QLVCENGYM-----KQQLRT-----------------APATTDASCDS 146
                       + + + G++      ++L+                   P   D +  +
Sbjct: 197 SNAPAPAPAPCPRCINDAGHLLLEKEVERLKALNQMLQQELQLQGTEGETPVAVDPASGA 256

Query: 147 VVTTPQHSLRDA----NNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK--------- 193
               P+ SL +     ++   L  +AE    E L  A   +  W+ +PG           
Sbjct: 257 FHPDPEPSLENVFAAQHDGQMLAKLAENAAQELLVLADPESPLWLPVPGGSFETLNMIAY 316

Query: 194 ----PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
               PG  SV   A+       A RA G+V L+P  + E L D  S+          TMF
Sbjct: 317 AQTFPGQMSVDAIALKTE----ATRASGVVMLDPKSLVEFLMDAESYG---------TMF 363

Query: 250 P---AGNA----------------GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSL 290
           P   +G A                G ++++  +   P+ L  AR    +R    L+ G+ 
Sbjct: 364 PGLVSGAATDKVYNWPTSREESYDGAVQMMTVELAFPSPLVAARKCTFVRCCKKLEQGAF 423

Query: 291 VVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEV 350
            V + SL   GA           R   +PSG LI+P       +  +DH+ ++  S+ ++
Sbjct: 424 AVVDVSLD-DGA-----------RCRKMPSGMLIQPIRYNSCKVSAIDHVRVDDTSIHDI 471

Query: 351 LRPLYESSKVVAQR--MTIAETSGEV------------VYGLGRQPAVLRTFSQRLSRGF 396
             P        A+R   ++A     +            V   GR+   +   +  L   +
Sbjct: 472 FHPCLSGVLFGARRWVTSMARQCARIRDVFHVTNCTLNVTSRGRK--TIMKLADNLLADY 529

Query: 397 NDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLL 454
             +V  F DD W++    G E  I  +   +S  ++S+   +      ++CA AS LL
Sbjct: 530 TSSVAAFPDDAWTVQCGVGTEQDIKIMYKRQSEGSSSSSNTA------VVCACASFLL 581


>gi|345195202|tpg|DAA34966.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 699

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 123/552 (22%), Positives = 211/552 (38%), Gaps = 126/552 (22%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q    +Y R+T  Q++ LE ++ ECP P   +R  L RE      +EP+QIK WFQNRR 
Sbjct: 13  QRQRKRYHRHTPRQIQQLEAMFKECPHPDENQRAALSREL----GLEPRQIKFWFQNRRT 68

Query: 84  REK---QRKEASRLQTVNRKLTAMNKLLME---------------------------END 113
           + K   +R +   L+  N K+   N  + E                           EN 
Sbjct: 69  QMKAQHERADNCFLRAENDKIRCENITMREALKNVICPSCGGPPVAEDFFDEQKLRMENA 128

Query: 114 RLQKQVSQLV-CENGYMKQ---QLRTAPATTDASCDSVVTT------------------- 150
           RL++++ ++    + Y+ +   Q+   P  + +S D  V                     
Sbjct: 129 RLKEELDRVSSITSKYLGRPFTQMPPVPTMSVSSLDLSVGGMPGQGLGGPSLDLDLLSGC 188

Query: 151 ----PQH---SLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQ-MPG----------- 191
               P H    + +   P  ++ +A   + E +  A      WVQ MPG           
Sbjct: 189 SSGLPYHMPAPVTEMERPM-MVDMATRAMDELIRLAQAGEQIWVQGMPGDAREVLDVATY 247

Query: 192 ----MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFR-------DC 240
                KPG    G F   +  +   +R  GLV +    + ++  D   W           
Sbjct: 248 DSLFAKPG----GAFRPPE-INVEGSRDSGLVFMSAVALVDVFMDTNKWMEFFPGIVSKA 302

Query: 241 RSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS 300
           ++++V      G + ++ ++Y + +  T + P R+   LRY   ++ G   V + SL G 
Sbjct: 303 QTVDVLVNGLCGRSESLIMMYEELHIMTPVVPTRELSFLRYCKQIEQGLWAVADVSLDGQ 362

Query: 301 GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLE----------------- 343
                 A      R+  +PSGCLI     G S +  V+HL +E                 
Sbjct: 363 ----RDAHYGVPSRSRRMPSGCLIADMSNGYSKVTWVEHLEIEHMLPINVLYRNLVLSGA 418

Query: 344 AWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGF 403
           A+     L  L  + +  A   T+     +V          +   SQR+   F  +++  
Sbjct: 419 AFGAHRWLAALQRACERFASLATLGVPHHDVAGVTPEGKRSMMRLSQRMVSSFCASLSSS 478

Query: 404 NDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLV 463
               W+L++  G  DV + V++ +  ST S   N      G++ + A+ +   VP   + 
Sbjct: 479 PLQRWTLLS--GTTDVSVCVSTHR--STDSGQPN------GVVLSAATSIWLPVPGDHVF 528

Query: 464 RFLREH--RSEW 473
            F+R+   RS+W
Sbjct: 529 AFVRDENARSQW 540


>gi|338797897|gb|AEI99592.1| HD-Zip IV transcription factor GL9 [Triticum aestivum]
          Length = 670

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 91/405 (22%), Positives = 164/405 (40%), Gaps = 78/405 (19%)

Query: 5   IQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           I Q      + + GS  K +L      R   +Q + LE  +S C  P   +R  L     
Sbjct: 23  IPQSNSDGHDGAEGSQPKRRLQ-----RLNPQQTQVLEGFFSICAHPDENQRMGLSES-- 75

Query: 65  ILSNIEPKQIKVWFQNRRCREKQ---RKEASRLQTVNRKLTAMNKLLMEENDRLQK---- 117
             + +  +Q+K WFQN+R   K    ++E+ R++       A N++L EEN RL      
Sbjct: 76  --TGLSMQQVKFWFQNKRTYMKHLTGKEESYRMK-------AQNEMLREENKRLASAAKA 126

Query: 118 ----------------QVSQLVCENGYMKQQ---LRTAPATTDASCDSVVTTPQHSLRDA 158
                           +V +L  EN  ++QQ   LR      D S  +++          
Sbjct: 127 SFCPSCVALPGQNPSVEVQRLKEENESLRQQVSQLRAEAHQLDPSTVNIIGR-------E 179

Query: 159 NNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG----MKPGPDSVGIFAISQSCSGV--- 211
           N+   +  + +  + EF+  +      W+ +PG    +         F    S + +   
Sbjct: 180 NDIDAIAELVQNAMHEFVVLSESGGPLWMPVPGGSLDLLNKVAYAQTFGARSSANAIGFR 239

Query: 212 --AARACGLVSLEPTKIAEILKDR-------PSWFRDCRSLEVFTMFP--AGNAGTIELL 260
             A RA G+V +E  +I + + D        P      ++ +++  +P  AG  G + L+
Sbjct: 240 VEATRADGMVMMEAKQIVDYIMDSECYTSFCPGTLTSAKTTKIYK-WPTNAGYNGAMHLM 298

Query: 261 YTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL-SGSGAGPNPASAAQFVRAEMLP 319
             +   P+ L P+R    +R    + NG++++ + SL +G G          F +   +P
Sbjct: 299 TAETVFPSPLVPSRKCTFVRCCRGMQNGTVIIVDVSLDNGDGT---------FFKCRKMP 349

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQR 364
           SG LIR  +   S + +++H+ +    V E+ RP        A+R
Sbjct: 350 SGLLIRSLNSDASQVTVIEHVQVNDAGVHELYRPTLSGLMFGARR 394


>gi|224134761|ref|XP_002327482.1| predicted protein [Populus trichocarpa]
 gi|222836036|gb|EEE74457.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 157/366 (42%), Gaps = 71/366 (19%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T +Q+  LE+ + ECP P+  +R+QL RE      +E KQIK WFQNRR +EK   
Sbjct: 23  YHRHTCQQILQLEKFFKECPHPNEKQRRQLSREL----GLEAKQIKFWFQNRRTQEKAQS 78

Query: 87  QRKEASRLQTVNRKLTAMNKLLME----------------ENDRLQKQVSQLVCENGYMK 130
           +R + S L+T N ++   N  + E                E +R Q  + +L  EN  ++
Sbjct: 79  ERSDNSVLRTENERIHCENLSIREAMKNVICPACGGHPFGEEER-QLNLQKLRQENARLR 137

Query: 131 QQLRTAPATTDAS--CDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVD--- 185
           ++ +  P         +  +   ++   D ++ A  L    +     +++    A+D   
Sbjct: 138 EEAKELPTFVQNQRMGNPGIDWGRNPGSDISHFAYRLEGIPDMENALMAETAAGAMDELI 197

Query: 186 ---------WVQMPG-----------MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTK 225
                    W++ P             +  P +     IS++    +++    V++    
Sbjct: 198 RLLRVNEPFWIKSPSDGRLILDRLSYERIYPRAAHF--ISRNARVESSKDSATVTMPGMD 255

Query: 226 IAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFW 277
           + ++  D   W         + R++ V      GN  G+++++Y Q +  + L P R+F+
Sbjct: 256 LVDMFLDPNKWVDLFPTIVTEARTIHVLEAGTVGNRHGSLQMMYEQMHILSPLVPPREFY 315

Query: 278 TLRYTTTLDNGSLVVCERS---LSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSII 334
            LR    L+ G  V+ + S   L  SG+ P          A  LPSGC+I+    G S I
Sbjct: 316 FLRLCLQLEPGQWVIADVSYDYLKESGSPPC---------AWRLPSGCMIQDMPNGCSKI 366

Query: 335 HIVDHL 340
             V+H+
Sbjct: 367 IWVEHV 372


>gi|242063218|ref|XP_002452898.1| hypothetical protein SORBIDRAFT_04g034580 [Sorghum bicolor]
 gi|241932729|gb|EES05874.1| hypothetical protein SORBIDRAFT_04g034580 [Sorghum bicolor]
          Length = 707

 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 93/411 (22%), Positives = 158/411 (38%), Gaps = 108/411 (26%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q    +Y R+T  Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR 
Sbjct: 15  QRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWFQNRRT 70

Query: 84  REK---QRKEASRLQTVNRKLTAMNKLLMEE---------------NDRLQKQVSQLVCE 125
           + K   +R++   L+  N K+   N  + E                +D   +Q  +L  E
Sbjct: 71  QMKAQHERQDNCFLRAENDKIRCENIAMREALRTVICHTCGGPPVTDDYFDEQ--KLRME 128

Query: 126 NGYMKQQLRTAPATTDASCDSVVTT----------------------------------- 150
           N  +K++L    + T       +T                                    
Sbjct: 129 NARLKEELDRVSSLTSKYLGRPITQLPPVQPLSMSSSLDLSVGGLGSPALGPSLDLDLLS 188

Query: 151 -------PQH---SLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG 200
                  P H   ++ +   P  +  +A   + E +  A      WV+  G   GPD   
Sbjct: 189 GGSSGYPPFHLPMTVSEMERPM-MAEMATRAMDELIRMAQAGEHLWVKTAG--GGPDGRE 245

Query: 201 IFAISQSCSGVA---------------ARACGLVSLEPTKIAEILKDR-------PSWFR 238
           +  +    S  A               +R  GLV +    + ++  D        P+   
Sbjct: 246 VLNVDTYDSIFAKPGGSFRGPDVHVEGSRDSGLVFMSAIGLVDMFMDSSKFTEFFPAIVS 305

Query: 239 DCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL- 297
             R+++V     AG + ++ L+Y + +  + + P R+F  LRY   +++G   + + S+ 
Sbjct: 306 KARTMDVLVNGMAGRSDSLVLMYEELHMMSPVVPTREFCFLRYCRQIEHGLWAIADISVD 365

Query: 298 -----SGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLE 343
                +  GA P+        R+  LPSGCLI     G S +  V+H+ +E
Sbjct: 366 LQQRDARFGAPPS--------RSCRLPSGCLIADMADGSSKVTWVEHMEIE 408


>gi|357131009|ref|XP_003567136.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ROC9-like [Brachypodium distachyon]
          Length = 758

 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 172/746 (23%), Positives = 275/746 (36%), Gaps = 186/746 (24%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           NK +     Y R+TAEQV  +E V+ E P P   +RQQL  +      + P+Q+K WFQN
Sbjct: 80  NKKKRSRKSYHRHTAEQVRVMEAVFKESPHPDEKQRQQLSEQL----GLSPRQVKFWFQN 135

Query: 81  RRCREKQRKE-------ASRLQTVNRKLTAMNKLLME------------ENDRLQ----- 116
           RR + K  +E        S L+ V ++  AM +L                +D +      
Sbjct: 136 RRTQIKAIQERHENSLLKSELENVQKENRAMRELARRPSRCANCGVEAASSDDVDPAAAA 195

Query: 117 KQVSQLVCENGYMKQQLRTAPATTD--ASCDSVV------------TTPQHSLRD----- 157
           +Q  QL  EN  +K ++    AT     S D V             T  ++ + D     
Sbjct: 196 RQEEQLQLENARLKAEIEKLRATXGKAVSTDGVASPAFSAGTVLLQTNSRNPVEDYGGGL 255

Query: 158 -ANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG------IFAISQSCSG 210
             ++   +L +A   L E  +  +     WV+   ++ G D +       +F      SG
Sbjct: 256 TGHDKQSILELAGRALEELTTMCSSGEPLWVR--SLETGRDILNYDEYLRLFGRDDDGSG 313

Query: 211 --------VAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVF----TMFPA 251
                    A+R  G+V ++ T++     D   W            +L+V          
Sbjct: 314 DQRAGWSVEASRESGVVYIDATQLVHAFMDVNQWKELFLPMIAKASTLDVIRTGENDDDD 373

Query: 252 GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAG---PNPAS 308
           G  G ++L++ +    T + P R+ +  RY   L        + S   + AG   P+P +
Sbjct: 374 GPDGVVQLMFAEVQMLTPMVPTRELYFARYCKKLAAEKWATVDVSFDKADAGGMDPSPPA 433

Query: 309 AAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNL-EAWSVPEVLRPLYESSKVVAQRMTI 367
                R    PSGC+I     G S +  V+H    E+   P + R +  S      R  +
Sbjct: 434 -----RCWKNPSGCIIEEQTNGHSRVTWVEHTRRPESAGAPSMYRAVTASGLAFGARRWL 488

Query: 368 A--------------------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDG 407
           A                    +++G  V  L  + +VL+  + R++     ++ G     
Sbjct: 489 ATLQLQCERMVFSVATNVPTRDSNG--VSTLAGRRSVLK-LAHRMTASLCRSIGGSRGLA 545

Query: 408 WSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR 467
           WS +T  GA D+ +    T   S    P       G I+CA  S  L  V P  L+ F+R
Sbjct: 546 WSRVTRAGAGDIRV----TSRRSAGGEPQ------GLIVCAVLSTWLP-VSPTALLDFVR 594

Query: 468 EH--RSEWADFNVDAYS-------AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEE 518
           +   R EW D  +   +       A     G+ A       +  G  I+     T   E 
Sbjct: 595 DESRRPEW-DATLSGGTVQRRVNLAKGKDRGNCAASSSAGAQHGGKWIVQDSSCTSSCEA 653

Query: 519 LLEVIRLEGHSLAQEDAFVSRDIHLLQ-ICSGVDENAVGACSELVFAPIDEMFPDDGPLL 577
           ++              A+   D  +LQ + SG D + V                    +L
Sbjct: 654 IV--------------AYAPVDAAVLQPVISGHDSSGVA-------------------VL 680

Query: 578 PSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQ 637
           P GF ++         PD L   R   +TSS   G   + AAG         S++T+AFQ
Sbjct: 681 PCGFAVV---------PDGLEYSRPAVITSSSRKG---DVAAG---------SLVTVAFQ 719

Query: 638 FPFESNLQDNVATMARQYVRSVISSV 663
               S+L    AT++     +VI  V
Sbjct: 720 VLASSSL---TATLSPDSAETVIGLV 742


>gi|14587301|dbj|BAB61212.1| putative homeobox protein GLABRA2 [Oryza sativa Japonica Group]
          Length = 779

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 186/486 (38%), Gaps = 104/486 (21%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+TAEQ+  +E ++ E P P   +RQQ+ ++      +  +Q+K WFQNRR + K   
Sbjct: 99  YHRHTAEQIRIMEALFKESPHPDERQRQQVSKQL----GLSARQVKFWFQNRRTQIKAVQ 154

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQ-LVC--------------ENGYMKQ 131
           +R E S L++   KL   ++ + E    L K+ S+ L C                   +Q
Sbjct: 155 ERHENSLLKSELEKLQDEHRAMRE----LAKKPSRCLNCGVVATSSDAAAAATAADTREQ 210

Query: 132 QLRTAPATTDASCDSVVTTPQHS---------------------------------LRDA 158
           +LR   A   A  + +  TP  S                                 LR  
Sbjct: 211 RLRLEKAKLKAEIERLRGTPGKSAADGIASPPCSASAGAMQTNSRSPPLHDHDGGFLRHD 270

Query: 159 NNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD------SVGIFAISQSCSG-- 210
           ++   +L +A   L E +   +     WV+  G++ G D       V +F      SG  
Sbjct: 271 DDKPRILELATRALDELVGMCSSGEPVWVR--GVETGRDILNYDEYVRLFRRDHGGSGDQ 328

Query: 211 ------VAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFT-MFPAGNAGT 256
                  A+R CGLV L+   +     D   W            +LE+ +     G  G 
Sbjct: 329 MAGWTVEASRECGLVYLDTMHLVHTFMDVDKWKDLFPTMISKAATLEMISNREDDGRDGV 388

Query: 257 IELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAE 316
           ++L+Y +    T + P R+ +  RY   L      + + S   S  G + +SA   VR  
Sbjct: 389 LQLMYAELQTLTPMVPTRELYFARYCKKLAAERWAIVDVSFDESETGVHASSA---VRCW 445

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVY 376
             PSGCLI   + G   +  V+H      +V     PLY            A T+  V +
Sbjct: 446 KNPSGCLIEEQNNGRCKMTWVEHTRCRRCTVA----PLYR-----------AVTASGVAF 490

Query: 377 GLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI-IAVNSTKSLSTASNP 435
           G  R  A L+   +R+   F  A N    D   + T  G   V+ +A   T SL   +  
Sbjct: 491 GARRWVAALQLQCERMV--FAVATNVPTRDSTGVSTLAGRRSVLKLAHRMTSSLCRTTGG 548

Query: 436 TNSLAF 441
           +  +A+
Sbjct: 549 SCDMAW 554


>gi|15242290|ref|NP_200030.1| homeobox-leucine zipper protein HDG7 [Arabidopsis thaliana]
 gi|75180477|sp|Q9LTK3.1|HDG7_ARATH RecName: Full=Homeobox-leucine zipper protein HDG7; AltName:
           Full=HD-ZIP protein HDG7; AltName: Full=Homeodomain
           GLABRA 2-like protein 7; AltName: Full=Homeodomain
           transcription factor HDG7; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 7
 gi|8885530|dbj|BAA97460.1| homeodomain transcription factor-like [Arabidopsis thaliana]
 gi|332008796|gb|AED96179.1| homeobox-leucine zipper protein HDG7 [Arabidopsis thaliana]
          Length = 682

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 146/367 (39%), Gaps = 57/367 (15%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T+ Q++ LE  + ECP P+  +R +L ++      +E KQIK WFQNRR + K   
Sbjct: 61  YHRHTSYQIQELESFFKECPHPNEKQRLELGKKL----TLESKQIKFWFQNRRTQMKTQL 116

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEEN--------------DRLQKQVSQLVCENGYMKQQ 132
           +R E   L+  N KL   N  L E                  +  +  QL  EN  +K++
Sbjct: 117 ERHENVILKQENEKLRLENSFLKESMRGSLCIDCGGAVIPGEVSFEQHQLRIENAKLKEE 176

Query: 133 LRTAPATTDASCDSVVTTPQHS---LRDANNPAG----------LLSIAEETLAEFLSKA 179
           L    A  +      ++  Q S   +   + P G           + +A E + E L  A
Sbjct: 177 LDRICALANRFIGGSISLEQPSNGGIGSQHLPIGHCVSGGTSLMFMDLAMEAMDELLKLA 236

Query: 180 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW--F 237
                 W      K    S+  F          +R  GLV +    + E L D   W   
Sbjct: 237 ELETSLWSS----KSEKGSMNHFP--------GSRETGLVLINSLALVETLMDTNKWAEM 284

Query: 238 RDC-----RSLEVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLV 291
            +C      +LEV +    G+  G+I L+  +    + L P +    LRY     +G   
Sbjct: 285 FECIVAVASTLEVISNGSDGSRNGSILLMQAEFQVMSPLVPIKQKKFLRYCKQHGDGLWA 344

Query: 292 VCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL 351
           V + S   +    N  S   +  ++M PSGC+I+    G S +  ++H   E      + 
Sbjct: 345 VVDVSYDINRGNENLKS---YGGSKMFPSGCIIQDIGNGCSKVTWIEHSEYEESHTHSLY 401

Query: 352 RPLYESS 358
           +PL  SS
Sbjct: 402 QPLLSSS 408


>gi|345195198|tpg|DAA34964.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 687

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 118/546 (21%), Positives = 204/546 (37%), Gaps = 116/546 (21%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q    +Y R+T  Q++ LE ++ ECP P   +R  L RE      +EP+QIK WFQNRR 
Sbjct: 13  QRQRKRYHRHTPRQIQQLEAMFKECPHPDENQRAALSREL----GLEPRQIKFWFQNRRT 68

Query: 84  REK---QRKEASRLQTVNRKLTAMNKLLME---------------ENDRLQKQVSQLVCE 125
           + K   +R +   L+  N K+   N  + E               + D   +Q  +L  E
Sbjct: 69  QMKAQHERADNCFLRAENDKIRCENITMREALKNVICPSCGGPPVDEDFFDEQ--KLRME 126

Query: 126 NGYMKQQLRTAPATTDASCDSVVT----TPQHSLRDANNPAG------------------ 163
           N  +K++L    + T        T     P  S+   +   G                  
Sbjct: 127 NARLKEELDRVSSITSKYLGRPFTQMPPVPTMSVSSLDLSVGGMGSLGGPSLDLDLLSGC 186

Query: 164 -------------------LLSIAEETLAEFLSKATGTAVDWVQ-MPGMKPGPDSVGIFA 203
                              ++ +A   + E +  A      WV+ +PG       VG + 
Sbjct: 187 SSGLPYQVPAPVTEMERPMMVDMAARAMDELIRLAQAGEQIWVKGVPGDAREVLDVGTYD 246

Query: 204 ISQSCSGVA----------ARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVF 246
              +  G A          +R  GLV +    + ++  D   W           ++++V 
Sbjct: 247 SLFAKPGAAFRPPDINVEASRDSGLVFMSAVALVDVFMDTNKWMEFFPGIVSKAQTVDVL 306

Query: 247 TMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNP 306
                G + ++ ++Y + +  T + P R+   LRY   ++ G   V + SL G       
Sbjct: 307 VNGLGGRSESLIMMYEELHIMTPVVPTRELSFLRYCKQIEQGLWAVADVSLEGQ----RD 362

Query: 307 ASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLE-----------------AWSVPE 349
           A      R+  +PSGCLI     G S +  V+H+ +E                 A+    
Sbjct: 363 AHYGVPSRSRRMPSGCLIADMSNGYSKVTWVEHMEIEQMLPINVLYRNLVLSGAAFGAHR 422

Query: 350 VLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS 409
            L  L  + +  A   T+     +V          +   SQR+   F  +++      W+
Sbjct: 423 WLAALQRACERFASVATLGVPHHDVAGVTPEGKRSMTKLSQRMVSSFCASLSSSPLQRWT 482

Query: 410 LMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH 469
           L++  G  DV + V++ +  ST S   N      G++ + A+ +   VP   +  F+R+ 
Sbjct: 483 LLS--GTTDVSVRVSTHR--STDSGQPN------GVVLSAATSIWLPVPGDHVFAFVRDE 532

Query: 470 --RSEW 473
             RS+W
Sbjct: 533 NARSQW 538


>gi|218200586|gb|EEC83013.1| hypothetical protein OsI_28071 [Oryza sativa Indica Group]
          Length = 765

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 166/741 (22%), Positives = 285/741 (38%), Gaps = 182/741 (24%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPI--LSN---------IEPKQIKVW 77
           +Y R+T  Q++ +E  + ECP P   +R++L RE  +  L N         +  +  K+ 
Sbjct: 103 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQNQHERHENAQLRAENDKLR 162

Query: 78  FQNRRCREKQRKEASRLQTVNRKLTAMN----------KLLMEENDRLQKQVSQLVCENG 127
            +N R +E     +  +  V   L  M+            L +E DR+    ++ V +  
Sbjct: 163 AENMRYKEAVSSASCPIAVVPPALGEMSFDEHHLRVEYARLRDEIDRISGIAAKHVGKPP 222

Query: 128 YMKQQLRTAPATTDASCDSV-------VTTPQ--------------HSLRDANNPAGL-L 165
            +   + ++P    A+   +       V TP               H L DA+ P  + L
Sbjct: 223 IVSFPVLSSPLAVAAARSPLDLAGAYGVVTPGLDMFGGAGDLLRGVHPL-DADKPMIVEL 281

Query: 166 SIA-----------EETLAEFLSKATGTAVDWVQMPGMKP---GPDSVGIFAISQSCSGV 211
           ++A           +E L    S+     +D  +   M P   GP   G+          
Sbjct: 282 AVAAMDELVQMAQLDEPLWSSSSEPAAALLDEEEYARMFPRGLGPKQYGL-------KSE 334

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSL-------EVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +  + + EIL D   +     S+       EV +   AGN  G ++++  +
Sbjct: 335 ASRHGAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYNGALQVMSME 394

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P+P       +    PSGCL
Sbjct: 395 FQVPSPLVPTRESYFVRYCKNNSDGTWAVVDVSLDS--LRPSPVQ-----KCRRRPSGCL 447

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA------------QRMTIAETS 371
           I+    G S +  V+H+ ++  SV  + +PL  S                 +R+  A  S
Sbjct: 448 IQEMPNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMAS 507

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 508 NIPNGDLGVITSVEGRKS--MLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDV--RVM 563

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+   A+     VPP  +  FLR+   RSEW     D  S
Sbjct: 564 TRKSVDDPGRPP-------GIVLNAATSFWLPVPPTAVFDFLRDETSRSEW-----DILS 611

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
                                 Q +  + +  +H   + ++R+   +  Q +  +     
Sbjct: 612 NGG-----------------AVQEMAHIANGRDHGNSVSLLRVNSANSNQSNMLI----- 649

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDT 593
           L + C+    +A G  S +V+AP+D +          PD   LLPSGF I+P        
Sbjct: 650 LQESCT----DASG--SYVVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-------- 695

Query: 594 PDTLTAHRTLDLTSSLEVGPATN--PAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
                             GP+ N   A G++ S     S+LT+AFQ   +S     ++  
Sbjct: 696 -----------------DGPSGNAQAAVGENGSGSGGGSLLTVAFQILVDSVPTAKLSLG 738

Query: 652 ARQYVRSVIS-SVQRVAMAIC 671
           +   V S+I+ +V+R+  A+C
Sbjct: 739 SVATVNSLIACTVERIKAAVC 759


>gi|218193817|gb|EEC76244.1| hypothetical protein OsI_13678 [Oryza sativa Indica Group]
          Length = 378

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ-IKVWFQ 79
           +K  +D+GKYV YT  QVEALERVY+ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF 
Sbjct: 135 DKAGMDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFP 194

Query: 80  NRR 82
            ++
Sbjct: 195 KQK 197


>gi|413939124|gb|AFW73675.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 701

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 157/401 (39%), Gaps = 97/401 (24%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q    +Y R+T  Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR 
Sbjct: 15  QRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWFQNRRT 70

Query: 84  REKQ----------RKEASRLQTVN---------------------------RKLTAMNK 106
           + K           R E  +++  N                           +KL   N 
Sbjct: 71  QMKAQHERQDNCFLRAENDKIRCENIAMQEALRNVICPTCGGPPVADDHFDEQKLRMENA 130

Query: 107 LLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVVTT---------------- 150
            L EE DR+    S+ +   G    QL +A A + +S D  V                  
Sbjct: 131 RLKEELDRVSSLTSKYL---GRPITQLPSAQALSMSSLDLSVGGLGGPSLDLDLLSGGSS 187

Query: 151 ---PQH----SLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP-GPDSV-GI 201
              P H    ++ +   P  +  +A   + E +  A      WV+  G +    D+   I
Sbjct: 188 GYPPFHLLPMAVSEMERPM-MAEMATRAMDELIRMAQAGEHLWVKTGGREVLNVDTYDSI 246

Query: 202 FAISQ-SCSG-----VAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTM 248
           FA    S  G       +R  GLV +    + ++  D   W           R+++V   
Sbjct: 247 FAKPDGSFRGPDVHVEGSRETGLVFMSAIGLVDMFMDSSKWTELFPAIVSKARTVDVLVN 306

Query: 249 FPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS------GA 302
              G + ++ L+Y + +  + + P R+F  LRY   +++G   + + S+         GA
Sbjct: 307 GMGGRSESLLLMYEELHVMSPVVPTREFCFLRYCRQIEHGLWAIADISVDQQQRDARFGA 366

Query: 303 GPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLE 343
            P+        R+  LPSGCLI     G S +  V+H+ +E
Sbjct: 367 PPS--------RSCRLPSGCLIADMADGSSKVTWVEHMEIE 399


>gi|226498004|ref|NP_001142912.1| uncharacterized protein LOC100275344 [Zea mays]
 gi|195611342|gb|ACG27501.1| hypothetical protein [Zea mays]
          Length = 698

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 183/762 (24%), Positives = 285/762 (37%), Gaps = 198/762 (25%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q    +Y R+T  Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR 
Sbjct: 15  QRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWFQNRRT 70

Query: 84  REKQ----------RKEASRLQTVN---------------------------RKLTAMNK 106
           + K           R E  +++  N                           +KL   N 
Sbjct: 71  QMKAQHERQDNCFLRAENDKIRCENIAMREALRSVICPTCGGPPVADDYFDEQKLRMENA 130

Query: 107 LLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC--------------------DS 146
            L EE DR+    S+ +   G    QL  A A    S                      S
Sbjct: 131 RLKEELDRVSSLTSKYL---GRPITQLPPAQAALSMSSLDLSVGGLGSPSLDLDLLSGGS 187

Query: 147 VVTTPQH---SLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK----PGPDSV 199
               P H   S+ +   P  +  +A   + E +  A      WV+  G +       DSV
Sbjct: 188 SGYPPFHLPMSVSEMERPM-MAEMATRAMDELIRMAQAGEHLWVKAGGREVLNVDTYDSV 246

Query: 200 GIFAISQSCSG-----VAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFT 247
                + S  G       +R  GLV +    + ++  D   W           R+++V  
Sbjct: 247 FAKPGAASFRGPDVHVEGSRDSGLVFMSAVGLVDMFMDSSKWTEFFPAIVSKARTVDVLV 306

Query: 248 MFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL------SGSG 301
              AG + ++ L+Y + +  + + P R+F  LRY   ++ G   + + S+      +  G
Sbjct: 307 NGMAGRSESLVLMYEELHVMSPVVPTREFCFLRYCRQIERGLWAIADISVDLQQHDARFG 366

Query: 302 AGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL--RPLYESSK 359
           A P+        R+  LPSGCLI     G S +  V+H+ +E   VP  L  R L  S  
Sbjct: 367 APPS--------RSCRLPSGCLIADMADGSSKVTWVEHMEIED-RVPIHLLYRDLILSGA 417

Query: 360 VVAQRMTIA-------ETSGEVVYGL--------GRQPAVLRT---FSQRLSRGFNDAVN 401
            +     +A         +  V  G+        G  P   R+    SQR+   F  +++
Sbjct: 418 ALGAHRWLAALQRACERCACLVPAGMPHRDIAVAGVTPEGKRSMMKLSQRMVSSFCASLS 477

Query: 402 GFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPAL 461
                 W+  T  G  DV + V   +S +    P+       G++ + A+ +   VP   
Sbjct: 478 ASQLHRWT--TLSGPSDVGVRVTVHRS-TDPGQPS-------GVVLSAATSIWLPVPCDR 527

Query: 462 LVRFLR-EH-RSEWADFNVDAYSAASLKAGSYAYPGMRPTRF-TGSQIIMPLGHTIEHEE 518
           +  F+R EH RS+W                S+  P    +R   GS      G+ I    
Sbjct: 528 VFAFVRDEHRRSQWDVL-------------SHGNPVQEVSRIPNGSHP----GNCIS--- 567

Query: 519 LLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPID---------EM 569
                 L G + +Q    +     L + C+       G  S +V+APID           
Sbjct: 568 -----LLRGLNASQNSMLI-----LQESCTD------GTGSLVVYAPIDIPAANVVMSGE 611

Query: 570 FPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTR 629
            P   PLLPSGF I+P     P  P + +A   L       VG   +PAA          
Sbjct: 612 DPSAIPLLPSGFTILP--DGRPGAPSSSSAGGPL-------VG---SPAAAG-------- 651

Query: 630 SVLTIAFQFPFESNLQDNVATMARQYVRSVIS-SVQRVAMAI 670
           S++T+AFQ    S     +   +   V S+IS +V+++  A+
Sbjct: 652 SLVTVAFQILVSSLPSSRLNAESVATVNSLISTTVEQIKAAL 693


>gi|345195196|tpg|DAA34963.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 692

 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 157/401 (39%), Gaps = 97/401 (24%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q    +Y R+T  Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR 
Sbjct: 15  QRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWFQNRRT 70

Query: 84  REKQ----------RKEASRLQTVN---------------------------RKLTAMNK 106
           + K           R E  +++  N                           +KL   N 
Sbjct: 71  QMKAQHERQDNCFLRAENDKIRCENIAMQEALRNVICPTCGGPPVADDHFDEQKLRMENA 130

Query: 107 LLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVVTT---------------- 150
            L EE DR+    S+ +   G    QL +A A + +S D  V                  
Sbjct: 131 RLKEELDRVSSLTSKYL---GRPITQLPSAQALSMSSLDLSVGGLGGPSLDLDLLSGGSS 187

Query: 151 ---PQH----SLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP-GPDSV-GI 201
              P H    ++ +   P  +  +A   + E +  A      WV+  G +    D+   I
Sbjct: 188 GYPPFHLLPMAVSEMERPM-MAEMATRAMDELIRMAQAGEHLWVKTGGREVLNVDTYDSI 246

Query: 202 FAISQ-SCSG-----VAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTM 248
           FA    S  G       +R  GLV +    + ++  D   W           R+++V   
Sbjct: 247 FAKPDGSFRGPDVHVEGSRETGLVFMSAIGLVDMFMDSSKWTELFPAIVSKARTVDVLVN 306

Query: 249 FPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS------GA 302
              G + ++ L+Y + +  + + P R+F  LRY   +++G   + + S+         GA
Sbjct: 307 GMGGRSESLLLMYEELHVMSPVVPTREFCFLRYCRQIEHGLWAIADISVDQQQRDARFGA 366

Query: 303 GPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLE 343
            P+        R+  LPSGCLI     G S +  V+H+ +E
Sbjct: 367 PPS--------RSCRLPSGCLIADMADGSSKVTWVEHMEIE 399


>gi|357124875|ref|XP_003564122.1| PREDICTED: homeobox-leucine zipper protein ROC8-like [Brachypodium
           distachyon]
          Length = 714

 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 149/410 (36%), Gaps = 108/410 (26%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 87
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      +E +QIK WFQNRR + K  
Sbjct: 24  RYHRHTPRQIQTLEGMFKECPHPDENQRAQLSREL----GLEARQIKFWFQNRRTQMKAQ 79

Query: 88  ---------RKEASRLQTVN---------------------------RKLTAMNKLLMEE 111
                    R E  +++  N                           +KL   N  L EE
Sbjct: 80  HERADNCFLRAENDKIRCENIAMGEALKNVICPTCGGPPVGEDFFDEQKLRMENARLKEE 139

Query: 112 NDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD------------------SVVTTPQH 153
            DR+    S+ +     M Q     P  +  S D                      TPQ 
Sbjct: 140 LDRVSSVASKFLGRPYSMSQMPHGTPPLSVNSLDLSMGSLGMGGQPLGVGGLGGGPTPQD 199

Query: 154 ----------------SLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
                            + +   P  +  IA   + E +  A      W+++PG   G +
Sbjct: 200 LELLGSSEIPQFQMPAPVSEMERPV-MAGIAARAMDEVIRLANAGEHVWIKVPG-GDGYE 257

Query: 198 SVGI------FAISQSCSGVAA--------RACGLVSLEPTKIAEILKDRPSWFR----- 238
           ++ +      F    S S   A        R C  V +    + E+  D   W       
Sbjct: 258 TLNVDTYDSLFGKPGSSSSFRAGDVRVEGTRHCAHVFMSAAPLVEVFMDTNKWMEFFPSI 317

Query: 239 --DCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERS 296
             + R+++       G + ++ L+Y + +  T L  +R+F  LRY   +D G   + + S
Sbjct: 318 VANARTVDNLVNGLDGRSESLILMYEEMHMLTPLVQSREFSFLRYCRQIDQGLWAIADVS 377

Query: 297 LSGSGAGPNPASAAQF---VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLE 343
           +            AQF    R+  LPSGCLI     G S +  V+H+ +E
Sbjct: 378 VETE-------RDAQFGVPSRSRRLPSGCLIADMANGYSKVTWVEHMEIE 420


>gi|326525158|dbj|BAK07849.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 685

 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 151/675 (22%), Positives = 248/675 (36%), Gaps = 183/675 (27%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 87
           +Y R+T  Q++ LE ++ ECP P   +R  L RE      +EP+QIK WFQNRR + K  
Sbjct: 19  RYHRHTPRQIQQLEAMFKECPHPDENQRMHLSREL----GLEPRQIKFWFQNRRTQMKAQ 74

Query: 88  ---------RKEASRLQTVN----------------------------RKLTAMNKLLME 110
                    R E  +++  N                             KL   N  L E
Sbjct: 75  HERADNCFLRAENDKIRCENIAMREALKNVICPTCGGPHSGADDYFDEHKLRMENAHLKE 134

Query: 111 ENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDS-----------VVTTPQHSLRDAN 159
           E DR+    S+      Y+ + +   P+    S  S           V   P   L    
Sbjct: 135 ELDRVSSLTSK------YLGRPITQLPSMQPLSMSSLELSVGGLGSPVALGPALDLDTLG 188

Query: 160 N------PAGLLSIAEETLAEFLSKATGTAVD--------WVQMPG-------------- 191
                  PA +  +    +AE  ++A    +         WV+  G              
Sbjct: 189 GSSPFQLPAPVSDMERPMMAEMATRAMDELIRLAQAGEHLWVKTAGGREVLNVDTYDSIF 248

Query: 192 MKPGPDS-----VGIFAISQSCSGVAARACGLVS--LEPTKIAEILKDRPSWFRDCRSLE 244
            KPG  S     V +     SC  V   A GLV   ++ +K  E     P+     R+++
Sbjct: 249 AKPGSSSFRGPDVHVEGSRDSCL-VLTTAIGLVDTFMDSSKWTEFF---PTVVTRARTID 304

Query: 245 VFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS---GSG 301
           V     AG + ++ L+Y + +  + + P R+F  LRY   ++ G   + + S+     + 
Sbjct: 305 VLVNGMAGRSESLVLMYEELHVMSPVVPTREFCFLRYCRQIEQGLWAIADVSVDLQRDAR 364

Query: 302 AGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWS-VPEVLRPLYESSKV 360
            G  PA      R+  LPSGCLI     G S +  V+H+  E  + + ++ R L  S   
Sbjct: 365 YGAPPA------RSRRLPSGCLIADMSNGYSKVTWVEHMETEDKTPINQLYRDLVLSGAA 418

Query: 361 VAQRMTIA------------------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNG 402
                 +A                  + +G  + G   + +++R  SQR+   F  +++ 
Sbjct: 419 FGAHRWLAALQRACERHACLVTPPHRDIAGVTLEG---KRSMMR-LSQRMVGSFCASLSA 474

Query: 403 FNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALL 462
                W+ ++  GA      V+    +    + +       G++ + A+ +   VP   +
Sbjct: 475 SQQHRWTTLSGPGA-----GVDEAAGVRVMVHRSTDPGQPSGVVLSAATSIWLPVPCDRV 529

Query: 463 VRFLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRF-TGSQIIMPLGHTIEHEEL 519
             F+R+   RS+W                S+  P    +R   GS      G++I     
Sbjct: 530 FAFVRDENTRSQWDVL-------------SHGNPVQEVSRIPNGSHP----GNSIS---- 568

Query: 520 LEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPID---------EMF 570
                L G + +Q    +     L + C      A  + S +V+APID            
Sbjct: 569 ----LLRGLNASQNSMLI-----LQESC------ADASGSLVVYAPIDLPAANVVMSGED 613

Query: 571 PDDGPLLPSGFRIIP 585
           P   PLLPSGF I+P
Sbjct: 614 PSAIPLLPSGFTILP 628


>gi|177667009|gb|ACB73218.1| homeodomain protein GL2-like 1 [Gossypium hirsutum]
          Length = 772

 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 171/792 (21%), Positives = 286/792 (36%), Gaps = 204/792 (25%)

Query: 6   QQQQQQQRESSSGSINKHQLDNG-------------------KYVRYTAEQVEALERVYS 46
           ++ ++++ ES SGS N   +D G                   +Y R+T +Q++ LE ++ 
Sbjct: 54  RRSREEEHESRSGSDN---MDGGSGDDHDPTTAAGDKPPRKKRYHRHTPQQIQELEALFK 110

Query: 47  ECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLT 102
           ECP P   +R +L  R C     +E +Q+K WFQNRR + K   +R E S L+  N KL 
Sbjct: 111 ECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLR 165

Query: 103 AMN----------------------------KLLMEENDRLQKQVSQLVCENGYMKQQLR 134
           A N                            +LL  EN RL+ ++ ++    G    +  
Sbjct: 166 AENMSIRDAMRNPICTNCGGPAIIGDMSLEEQLLRIENARLKDELDRVCALAGKFLGRPI 225

Query: 135 TAPATTDASCDSVVTTPQHSL------------RDA--------NNPAG------LLSIA 168
           T P   ++S +  V T                  DA        N PA        L +A
Sbjct: 226 TGPPLPNSSLELGVGTNGTFGTTMATTTTLPLGHDALPTMVVPSNRPATTLDRSMFLELA 285

Query: 169 EETLAEFLSKATGTAVDWVQ-MPGMKPGPDSVGIFAISQSCSGV--------AARACGLV 219
              + E +  A      W++ + G +   +          C G+        A+R  G+V
Sbjct: 286 LAAMDELVKMAQTDEPLWIKNIEGGREMLNHDEYLRTFTPCIGLKPNGFVTEASRETGVV 345

Query: 220 SLEPTKIAEILKDRPSW--FRDCRSLEVFTMFPAGNA------GTIELLYTQAYAPTTLA 271
            +    + E L D   W     C      T     N       G ++L+  +    + L 
Sbjct: 346 IINSLALVETLMDSNRWAEMFHCMIARTSTTDVISNGMGGTRNGALQLMNAELQILSPLV 405

Query: 272 PARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGG 331
           P R+   LR+      G   V + S+           +  FV    LPSGC+++    G 
Sbjct: 406 PVREVSFLRFCKQHAEGVWAVVDVSVD------TIKESTTFVTCRRLPSGCVVQDMPNGY 459

Query: 332 SIIHIVDHLNLEAWSVPEVLRPLYESS-KVVAQRM-----------------TIAETSGE 373
           S +   +H   +   V ++ RPL  S     AQR                  T+      
Sbjct: 460 SKVIWAEHAEYDESQVHQLYRPLLSSGVGFGAQRWVAALQRQCECLAILMSSTVPTRDHT 519

Query: 374 VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTAS 433
            +   GR+  +    +QR++  F   V       W+ +   G  D  + V + KS+    
Sbjct: 520 AITASGRRSML--KLAQRMTDNFCAGVCASTVHKWNKLNA-GNVDEDVRVMTRKSIDDPG 576

Query: 434 NPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSAASLKAGSY 491
            P        GI+ + A+ +   V P  L  FLR    RSEW   +    +   ++  ++
Sbjct: 577 EPP-------GIVLSAATSVWLPVSPQRLFDFLRNERLRSEWDILS----NGGPMQEMAH 625

Query: 492 AYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVD 551
              G                   +H   + ++R    +  Q    +     L + C  +D
Sbjct: 626 IAKGQ------------------DHGNCVSLLRASAMNANQSSMLI-----LQETC--ID 660

Query: 552 ENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLDSKTPDTPDTLTAHRT 602
                A S +V+AP+D     +  + G      LLPSGF I+         PD   +H  
Sbjct: 661 ----AAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIV---------PDGPRSH-- 705

Query: 603 LDLTSSLEVGPATNPAAGDSSSCHHTRSV---LTIAFQFPFESNLQDNVATMARQYVRSV 659
                    GP +N     ++    +      LT+AFQ    S+    +   + + V ++
Sbjct: 706 ---------GPISNGHVNGNTGGGSSSVGGSPLTVAFQILVNSSPTAKLTVESVETVNNL 756

Query: 660 IS-SVQRVAMAI 670
           IS +VQ++  A+
Sbjct: 757 ISCTVQKIKAAL 768


>gi|115455597|ref|NP_001051399.1| Os03g0769800 [Oryza sativa Japonica Group]
 gi|50872455|gb|AAT85055.1| putative homeodomain leucine-zipper protein Hox9 [Oryza sativa
           Japonica Group]
 gi|108711284|gb|ABF99079.1| Homeobox domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|113549870|dbj|BAF13313.1| Os03g0769800 [Oryza sativa Japonica Group]
 gi|215712388|dbj|BAG94515.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 242

 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ-IKVWFQ 79
           +K  +D+GKYV YT  QVEALERVY+ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF 
Sbjct: 160 DKAGMDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFP 219

Query: 80  NRR 82
            ++
Sbjct: 220 KQK 222


>gi|108711285|gb|ABF99080.1| Homeobox domain containing protein, expressed [Oryza sativa
           Japonica Group]
          Length = 226

 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ-IKVWFQ 79
           +K  +D+GKYV YT  QVEALERVY+ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF 
Sbjct: 160 DKAGMDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFP 219

Query: 80  NRR 82
            ++
Sbjct: 220 KQK 222


>gi|40539067|gb|AAR87324.1| expressed protein [Oryza sativa Japonica Group]
          Length = 115

 Score = 82.4 bits (202), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ-IKVWFQ 79
           +K  +D+GKYV YT  QVEALERVY+ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF 
Sbjct: 49  DKAGMDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFP 108

Query: 80  NRR 82
            ++
Sbjct: 109 KQK 111


>gi|38636822|dbj|BAD03062.1| putative OCL5 protein [Oryza sativa Japonica Group]
 gi|46390804|dbj|BAD16310.1| putative OCL5 protein [Oryza sativa Japonica Group]
          Length = 828

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 165/416 (39%), Gaps = 90/416 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + E+L D   W            +LEV +   AGN  G ++L+  +
Sbjct: 397 ASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAE 456

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL----SGSGAGPNPASAAQFVRAEMLP 319
              P+ L P R+   LRY     +G+  V + SL    +G+G G  PA+A    R    P
Sbjct: 457 FQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR---P 513

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAE---------- 369
           SGCLI+    G S +  V+H+  +   V  + +P+  S      R  +A           
Sbjct: 514 SGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLAS 573

Query: 370 ----------TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                      +G +    GR+   +   ++R+   F   V       W+ ++  GAEDV
Sbjct: 574 AMASNVASSGDAGVITTSEGRRS--MLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDV 631

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFN 477
              V + KS+     P        GI+   A+     VPP+ +  FLR+   RSEW    
Sbjct: 632 --RVMTRKSVDDPGRPP-------GIILNAATSFWLPVPPSRVFDFLRDDSTRSEW---- 678

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
            D  S   +                  Q +  + +  +H   + ++R+   +  Q +  +
Sbjct: 679 -DILSNGGV-----------------VQEMAHIANGRDHGNAVSLLRVNNANSNQSNMLI 720

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRII 584
                 LQ C     +A G  S +++AP+D +          PD   LLPSGF I+
Sbjct: 721 ------LQECC---TDATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 765



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 170 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 225

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E    +  N  L A N+ L  EN R ++ ++   C N
Sbjct: 226 HE----RHENNALRAENEKLRAENMRYKEALANASCPN 259


>gi|187611406|sp|A3BPF2.1|ROC7_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC7; AltName:
           Full=GLABRA 2-like homeobox protein 7; AltName:
           Full=HD-ZIP protein ROC7; AltName: Full=Homeodomain
           transcription factor ROC7; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 7
          Length = 749

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 166/416 (39%), Gaps = 90/416 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQ 263
           A+R   +V +    + E+L D   W            +LEV +   AGN  G ++L+  +
Sbjct: 318 ASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAE 377

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL----SGSGAGPNPASAAQFVRAEMLP 319
              P+ L P R+   LRY     +G+  V + SL    +G+G G  PA+A    R    P
Sbjct: 378 FQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR---P 434

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAE---------- 369
           SGCLI+    G S +  V+H+  +   V  + +P+  S      R  +A           
Sbjct: 435 SGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLAS 494

Query: 370 ----------TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                      +G +    GR+   +   ++R+   F   V       W+ ++  GAEDV
Sbjct: 495 AMASNVASSGDAGVITTSEGRRS--MLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDV 552

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFN 477
              V + KS+     P        GI+   A+     VPP+ +  FLR+   RSEW    
Sbjct: 553 --RVMTRKSVDDPGRPP-------GIILNAATSFWLPVPPSRVFDFLRDDSTRSEW---- 599

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
            D  S   +                  Q +  + +  +H   + ++R+   +  Q +  +
Sbjct: 600 -DILSNGGV-----------------VQEMAHIANGRDHGNAVSLLRVNNANSNQSNMLI 641

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRII 584
                L + C+    +A G  S +++AP+D +          PD   LLPSGF I+
Sbjct: 642 -----LQECCT----DATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 686



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 91  RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 146

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E    +  N  L A N+ L  EN R ++ ++   C N
Sbjct: 147 HE----RHENNALRAENEKLRAENMRYKEALANASCPN 180


>gi|222639874|gb|EEE68006.1| hypothetical protein OsJ_25963 [Oryza sativa Japonica Group]
          Length = 785

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 165/416 (39%), Gaps = 90/416 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQ 263
           A+R   +V +    + E+L D   W            +LEV +   AGN  G ++L+  +
Sbjct: 354 ASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAE 413

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL----SGSGAGPNPASAAQFVRAEMLP 319
              P+ L P R+   LRY     +G+  V + SL    +G+G G  PA+A    R    P
Sbjct: 414 FQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR---P 470

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAE---------- 369
           SGCLI+    G S +  V+H+  +   V  + +P+  S      R  +A           
Sbjct: 471 SGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLAS 530

Query: 370 ----------TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                      +G +    GR+   +   ++R+   F   V       W+ ++  GAEDV
Sbjct: 531 AMASNVASSGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDV 588

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFN 477
              V + KS+     P        GI+   A+     VPP+ +  FLR+   RSEW    
Sbjct: 589 --RVMTRKSVDDPGRPP-------GIILNAATSFWLPVPPSRVFDFLRDDSTRSEW---- 635

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
            D  S   +                  Q +  + +  +H   + ++R+   +  Q +  +
Sbjct: 636 -DILSNGGV-----------------VQEMAHIANGRDHGNAVSLLRVNNANSNQSNMLI 677

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRII 584
                 LQ C     +A G  S +++AP+D +          PD   LLPSGF I+
Sbjct: 678 ------LQECC---TDATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 722



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 127 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 182

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E    +  N  L A N+ L  EN R ++ ++   C N
Sbjct: 183 HE----RHENNALRAENEKLRAENMRYKEALANASCPN 216


>gi|338797899|gb|AEI99593.1| HD-Zip IV transcription factor GL9H1 [Triticum durum]
          Length = 674

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/376 (22%), Positives = 153/376 (40%), Gaps = 85/376 (22%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---R 88
           R   +Q + LE  +  C  P   +R  +       + +  +Q+K WFQN+R   K    +
Sbjct: 46  RLNPQQTQVLEGFFGICAHPDENQRMGMSES----TGLTMQQVKFWFQNKRTHMKHVTGK 101

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQK--------------------QVSQLVCENGY 128
           +E  R++       A N++L EEN RL                      +V +L  EN  
Sbjct: 102 EETYRMK-------AQNEMLREENKRLASAAKTAFCPACVALPGLNPSVEVQRLRQENES 154

Query: 129 MKQQLR----------TAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSK 178
           +KQQL           + P   D S ++++          N+   +  +A+  + EF+  
Sbjct: 155 LKQQLSQLRAEAHPSSSRPFQLDPSTENIIGR-------ENDMDAIAELAQSAMHEFVVL 207

Query: 179 ATGTAVDWVQMPGMKPGPDSVGIFAISQSCSG-----------VAARACGLVSLEPTKIA 227
           +      W+ +PG     D +   A +Q+               A RA G+V ++  +I 
Sbjct: 208 SESGGPLWMPVPG--GSLDVLNKMAYAQTFGAGSSANAIGFMTEATRADGMVMMDAKQIV 265

Query: 228 EILKDRPSWFRDCRSL-------EVFTMFP--AGNAGTIELLYTQAYAPTTLAPARDFWT 278
           + + D   +   C  L       +V+  +P  AG  G + L+  +   P+ L P+R    
Sbjct: 266 DYIMDSECYTSFCPGLVTSANTTKVYK-WPTSAGYNGAMHLMTVETVFPSPLVPSRKCTF 324

Query: 279 LRYTTTLDNGSLVVCERSL-SGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIV 337
           +R    + NG++++ + SL +G G            +   +PSG LIR  +   S + +V
Sbjct: 325 VRCCRDMQNGTVIIVDVSLDNGDGT----------FKCHKMPSGILIRSLNSDASQVTVV 374

Query: 338 DHLNLEAWSVPEVLRP 353
           +H+ +    V E+ RP
Sbjct: 375 EHVQVNDTGVHELYRP 390


>gi|187611405|sp|A2YR02.1|ROC7_ORYSI RecName: Full=Homeobox-leucine zipper protein ROC7; AltName:
           Full=GLABRA 2-like homeobox protein 7; AltName:
           Full=HD-ZIP protein ROC7; AltName: Full=Homeodomain
           transcription factor ROC7; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 7
          Length = 749

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 165/416 (39%), Gaps = 90/416 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQ 263
           A+R   +V +    + E+L D   W            +LEV +   AGN  G ++L+  +
Sbjct: 318 ASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAE 377

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL----SGSGAGPNPASAAQFVRAEMLP 319
              P+ L P R+   LRY     +G+  V + SL    +G+G G  PA+A    R    P
Sbjct: 378 FQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR---P 434

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAE---------- 369
           SGCLI+    G S +  V+H+  +   V  + +P+  S      R  +A           
Sbjct: 435 SGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLAS 494

Query: 370 ----------TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                      +G +    GR+   +   ++R+   F   V       W+ ++  GAEDV
Sbjct: 495 AMASNVASSGDAGVITTSEGRRS--MLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDV 552

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFN 477
              V + KS+     P        GI+   A+     VPP+ +  FLR+   RSEW    
Sbjct: 553 --RVMTRKSVDDPGRPP-------GIVLNAATSFWLPVPPSRVFDFLRDDSTRSEW---- 599

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
            D  S   +                  Q +  + +  +H   + ++R+   +  Q +  +
Sbjct: 600 -DILSNGGV-----------------VQEMAHIANGRDHGNAVSLLRVNNANSNQSNMLI 641

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRII 584
                 LQ C     +A G  S +++AP+D +          PD   LLPSGF I+
Sbjct: 642 ------LQECC---TDATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 686



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 91  RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 146

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E    +  N  L A N+ L  EN R ++ ++   C N
Sbjct: 147 HE----RHENNALRAENEKLRAENMRYKEALANASCPN 180


>gi|222625870|gb|EEE60002.1| hypothetical protein OsJ_12734 [Oryza sativa Japonica Group]
          Length = 201

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ-IKVWFQ 79
           +K  +D+GKYV YT  QVEALERVY+ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF 
Sbjct: 135 DKAGMDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFP 194

Query: 80  NRR 82
            ++
Sbjct: 195 KQK 197


>gi|325260819|gb|ADZ04638.1| hypothetical protein [Oryza glaberrima]
          Length = 778

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 166/416 (39%), Gaps = 90/416 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQ 263
           A+R   +V +    + E+L D   W            +LEV +   AGN  G ++L+  +
Sbjct: 347 ASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAE 406

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL----SGSGAGPNPASAAQFVRAEMLP 319
              P+ L P R+   LRY     +G+  V + SL    +G+G G  PA+A    R    P
Sbjct: 407 FQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR---P 463

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAE---------- 369
           SGCLI+    G S +  V+H+  +   V  + +P+  S      R  +A           
Sbjct: 464 SGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLAS 523

Query: 370 ----------TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                      +G +    GR+   +   ++R+   F   V       W+ ++  GAEDV
Sbjct: 524 AMASNVASSGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDV 581

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFN 477
              V + KS+     P        GI+   A+     VPP+ +  FLR+   RSEW    
Sbjct: 582 --RVMTRKSVDDPGRPP-------GIILNAATSFWLPVPPSRVFDFLRDDSTRSEW---- 628

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
            D  S   +                  Q +  + +  +H   + ++R+   +  Q +  +
Sbjct: 629 -DILSNGGV-----------------VQEMAHIANGRDHGNAVSLLRVNNANSNQSNMLI 670

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRII 584
                L + C+    +A G  S +++AP+D +          PD   LLPSGF I+
Sbjct: 671 -----LQECCT----DATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 715



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 120 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 175

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E    +  N  L A N+ L  EN R ++ ++   C N
Sbjct: 176 HE----RHENNALRAENEKLRAENMRYKEALANASCPN 209


>gi|338797895|gb|AEI99591.1| HD-Zip IV transcription factor GL9H2 [Triticum durum]
          Length = 683

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 102/482 (21%), Positives = 183/482 (37%), Gaps = 101/482 (20%)

Query: 5   IQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           I Q     ++ + GS  K +L      R T +Q + LE  +  C  P   +R  +     
Sbjct: 26  ISQGNSDGQDGAEGSQPKRRLQ-----RLTPQQTQVLEGFFGICAHPDENQRMGMSES-- 78

Query: 65  ILSNIEPKQIKVWFQNRRCREKQ---RKEASRLQTVNRKLTAMNKLLMEENDRLQK---- 117
             + +  +Q++ WFQN+R   K    ++E  R++       A N++L EEN RL      
Sbjct: 79  --TGLTMQQVRFWFQNKRTHMKHVTGKEETYRMK-------AQNEMLREENKRLASAAKT 129

Query: 118 ----------------QVSQLVCENGYMKQQLR----------TAPATTDASCDSVVTTP 151
                           +V +L  EN  +KQQL           + P   D S +++    
Sbjct: 130 SFCPSCVALPGLSPSGEVQRLRQENEQLKQQLSQLRAEAHPSSSRPFQLDPSMENITGR- 188

Query: 152 QHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSG- 210
                  N+   +  +A+  + EF+  A      W+ +PG     D +   A +Q+    
Sbjct: 189 ------ENDMDAIAELAQSAMHEFVVLAEAGGPLWMPVPG--GSFDVLNKMAYAQTFGAR 240

Query: 211 -----------VAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEV------FTMFP--A 251
                       A RA  +V ++  +I + + D   +   C  L           +P  A
Sbjct: 241 SSANVILGFMTEATRADDMVMMDAKQIVDYIMDSECYTSFCPGLLTSANTTKIYKWPTSA 300

Query: 252 GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL-SGSGAGPNPASAA 310
           G  G + L+  +   P+ L P+R    +R    + NG++++ + SL +G G         
Sbjct: 301 GYNGAMHLVTVETVFPSPLVPSRKCTFVRCCRDMQNGTVIIVDVSLDNGDGT-------- 352

Query: 311 QFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYES---------SKVV 361
             V+   +PSG L+R  +   S + +++H+ +    + E+ RP             S +V
Sbjct: 353 --VKCHKMPSGVLVRSLNSDASQVTVIEHVQVNDTGLHELYRPSLSGLMFGARRWVSSIV 410

Query: 362 AQRMTIAE---TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAED 418
            Q   + +    S     G       L   +  L  G+   +      GW+++   G ED
Sbjct: 411 RQSARMRDLFVVSKSASNGNTNGRKTLMKIADGLLAGYASGIAAVPGGGWTILRGAGTED 470

Query: 419 VI 420
            I
Sbjct: 471 DI 472


>gi|218200438|gb|EEC82865.1| hypothetical protein OsI_27729 [Oryza sativa Indica Group]
          Length = 785

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 165/416 (39%), Gaps = 90/416 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQ 263
           A+R   +V +    + E+L D   W            +LEV +   AGN  G ++L+  +
Sbjct: 354 ASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAE 413

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL----SGSGAGPNPASAAQFVRAEMLP 319
              P+ L P R+   LRY     +G+  V + SL    +G+G G  PA+A    R    P
Sbjct: 414 FQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR---P 470

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAE---------- 369
           SGCLI+    G S +  V+H+  +   V  + +P+  S      R  +A           
Sbjct: 471 SGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLAS 530

Query: 370 ----------TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                      +G +    GR+   +   ++R+   F   V       W+ ++  GAEDV
Sbjct: 531 AMASNVASSGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDV 588

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFN 477
              V + KS+     P        GI+   A+     VPP+ +  FLR+   RSEW    
Sbjct: 589 --RVMTRKSVDDPGRPP-------GIVLNAATSFWLPVPPSRVFDFLRDDSTRSEW---- 635

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
            D  S   +                  Q +  + +  +H   + ++R+   +  Q +  +
Sbjct: 636 -DILSNGGV-----------------VQEMAHIANGRDHGNAVSLLRVNNANSNQSNMLI 677

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRII 584
                 LQ C     +A G  S +++AP+D +          PD   LLPSGF I+
Sbjct: 678 ------LQECC---TDATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 722



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 127 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 182

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E    +  N  L A N+ L  EN R ++ ++   C N
Sbjct: 183 HE----RHENNALRAENEKLRAENMRYKEALANASCPN 216


>gi|297741089|emb|CBI31820.3| unnamed protein product [Vitis vinifera]
          Length = 885

 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 142/382 (37%), Gaps = 89/382 (23%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           KY R+T EQ+  LE  + E P P   +R  L R+     N+EP+Q+K WFQNRR + K  
Sbjct: 39  KYHRHTQEQINELETCFKEWPHPDEKQRLDLSRKL----NLEPRQVKFWFQNRRTQMKNQ 94

Query: 87  -QRKEASRLQTVNRKLTAMN----------------------KLLMEENDRLQKQVSQLV 123
            +R E   L+  N KL   N                       + +EEN        QL 
Sbjct: 95  LERHENVMLRQENDKLRVENVAIKDAVRNPICNHCGGVAMLGNITIEEN--------QLR 146

Query: 124 CENGYMKQQLRTAPATTDASCDSVVT-----------TPQHSLRDANNPAGLLSIAEETL 172
            EN  ++ +L       +      VT           +    L  A N +  + +A   +
Sbjct: 147 VENAQLRDELSRICGLAEKFLGRPVTPLASPIALPRPSSNLELEVAGNGSVFVELAVTAM 206

Query: 173 AEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKD 232
            E L  A   +  W  M  +  G +++            A+R  G+V +    + E L D
Sbjct: 207 DELLRLAQADSPIW--MTSLDGGKETLN----------PASRETGMVMINSLALVETLMD 254

Query: 233 RPSWFRDCRSLEVFTMFPAGNA-----------------GTIELLYTQAYAPTTLAPARD 275
              W +         MFP   A                 G ++L++ +    + L P R 
Sbjct: 255 GSRWAQ---------MFPCVIAKASTTDVLSSGIGRTRHGALQLMHAELQVLSPLVPVRQ 305

Query: 276 FWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIH 335
              LR+      G   V + S+  +  G   AS   FV    L SGC+++    G + + 
Sbjct: 306 VKFLRFCKQHGEGLWAVVDVSIDTALDG---ASINSFVNCRRLLSGCVVQDLSNGYTRVT 362

Query: 336 IVDHLNLEAWSVPEVLRPLYES 357
            ++H   +  +V  + R L  S
Sbjct: 363 WIEHSEYDESAVHYLYRSLLSS 384


>gi|357144757|ref|XP_003573403.1| PREDICTED: homeobox-leucine zipper protein ROC1-like [Brachypodium
           distachyon]
          Length = 812

 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 123/503 (24%), Positives = 207/503 (41%), Gaps = 109/503 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSL-------EVFTMFPAGNA-GTIELLYTQ 263
           A+R   +V +    + EIL D   +     S+       EV +   AGN  G ++++  +
Sbjct: 378 ASRGANVVIMTHASLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYDGALQVMSME 437

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY      GS  V + SL      P+PA     V+    PSGCL
Sbjct: 438 FQVPSPLVPTRESYFVRYCKHNPEGSWAVVDVSLDS--LRPSPA-----VKCRRRPSGCL 490

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS----------------KVVAQRMTI 367
           I+    G S +  V+H+ ++  SV ++ +PL  S                 + +A  M  
Sbjct: 491 IQELPNGYSKVTWVEHVEVDDRSVHDIYKPLVNSGLAFGAKRWVGTLGRQCERLASAMAS 550

Query: 368 AETSGE--VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
           +  +G+  V+  +  + ++L+  ++R+   F   V       W+ ++  GAEDV   V +
Sbjct: 551 SIPNGDLGVITSVEGRKSMLK-LAERMVASFCGGVTASVAHQWTTLSGSGAEDV--RVMT 607

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS+     P        GI+   A+     V P  +  FLR+   RSEW     D  S 
Sbjct: 608 RKSVDDPGRPP-------GIVLNAATSFWLPVSPNTVFDFLRDETSRSEW-----DILSN 655

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
             +                  Q +  + +  +H   + ++R+   +  Q +  +     L
Sbjct: 656 GGI-----------------VQEMAHIANGRDHGNCVSLLRVNSANSNQSNMLI-----L 693

Query: 544 LQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDTP 594
            + C+  DE+     S +V+AP+D +          PD   LLPSGF I+P     P  P
Sbjct: 694 QESCT--DESG---SSYVVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP---DGPSAP 745

Query: 595 DTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
                     L+   E G     AAG         S+LT+AFQ   +S     ++  +  
Sbjct: 746 ----------LSGINEEGGV---AAGKGG------SLLTVAFQILVDSVPTAKLSLGSVA 786

Query: 655 YVRSVIS-SVQRVAMAICPSGLS 676
            V S+I+ +V+R+  A+C  G S
Sbjct: 787 TVNSLIACTVERIKAAVCRGGSS 809



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 8/104 (7%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           N+      +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN
Sbjct: 113 NQRPRKKKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQN 168

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
           +R + K + E       N +L A N  L  EN R ++ +S   C
Sbjct: 169 KRTQMKNQHEKQE----NSQLRAENDKLRAENMRYKEALSSASC 208


>gi|30684155|ref|NP_193506.2| homeobox-leucine zipper protein HDG4 [Arabidopsis thaliana]
 gi|75329764|sp|Q8L7H4.1|HDG4_ARATH RecName: Full=Homeobox-leucine zipper protein HDG4; AltName:
           Full=HD-ZIP protein HDG4; AltName: Full=Homeodomain
           GLABRA 2-like protein 4; AltName: Full=Homeodomain
           transcription factor HDG4; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 4
 gi|22136630|gb|AAM91634.1| putative GLABRA2 protein [Arabidopsis thaliana]
 gi|332658537|gb|AEE83937.1| homeobox-leucine zipper protein HDG4 [Arabidopsis thaliana]
          Length = 709

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 181/436 (41%), Gaps = 76/436 (17%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ E   P +  R +L ++      + P Q+K WFQN+R + K  
Sbjct: 91  RYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKL----GLSPIQVKFWFQNKRTQIK-- 144

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENGYMKQQ---LRTA 136
             A + ++ N KL A N+ L  E+  +Q     L C         EN  ++Q+   LR+ 
Sbjct: 145 --AQQSRSDNAKLKAENETLKTESQNIQSNFQCLFCSTCGHNLRLENARLRQELDRLRSI 202

Query: 137 PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM---- 192
            +  + S    + TP+    + NN   +L IAEE  A  +  A   A +  +M  +    
Sbjct: 203 VSMRNPSPSQEI-TPE---TNKNNNDNML-IAEEEKAIDMELAVSCARELAKMCDINEPL 257

Query: 193 --KPGPDSVGIFAISQSCSGV---------------AARACGLVSLEPTKIAEILKDRPS 235
             K   D+  +    +    +               A+RA  ++ L    + +   D   
Sbjct: 258 WNKKRLDNESVCLNEEEYKKMFLWPLMNDDDRFRREASRANAVIMLNCITLVKAFLDADK 317

Query: 236 W-------FRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTT-TLDN 287
           W           ++ ++ +   +G +GT+ L++ +    + L P R+ + LRY     + 
Sbjct: 318 WSEMFFPIVSSAKTAQIISSGASGPSGTLLLMFAELQVVSPLVPTREAYFLRYVEQNAEE 377

Query: 288 GSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSV 347
           G  +V +  +        PASA    +    PSGC+I+    G S +  V+H+ +E   V
Sbjct: 378 GKWMVVDFPIDRI----KPASATTTDQYRRKPSGCIIQAMRNGYSQVTWVEHVEVEEKHV 433

Query: 348 -PEVLRPLYES----------SKVVAQRMTIAETSGEVVYGLGRQPAV-----LRTFSQR 391
             EV+R   ES          S +  Q   +A      +  LG  P+V     L   SQR
Sbjct: 434 QDEVVREFVESGVAFGAERWLSVLKRQCERMASLMATNITDLGVIPSVEARKNLMKLSQR 493

Query: 392 LSRGFNDAVNGFNDDG 407
           + + F   +N  N  G
Sbjct: 494 MVKTF--CLNIINSHG 507


>gi|218189094|gb|EEC71521.1| hypothetical protein OsI_03822 [Oryza sativa Indica Group]
          Length = 759

 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 182/459 (39%), Gaps = 74/459 (16%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
           Y R+TAEQ+  +E ++ E P P   +RQQ ++E    S ++ +  K+  ++R  RE  +K
Sbjct: 99  YHRHTAEQIRIMEALFKESPHPDERQRQQAVQERHENSLLKSELEKLQDEHRAMRELAKK 158

Query: 90  EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMK---QQLRTAPATTDASCDS 146
            +   + +N  + A +   +        +  +L  EN  +K   ++LR  P  + A  D 
Sbjct: 159 PS---RCLNCGVVATSSDAVAAATAADTREQRLRLENAKLKAEIERLRGTPGKSAA--DG 213

Query: 147 VVTTP------------------QHS---LRDANNPAGLLSIAEETLAEFLSKATGTAVD 185
           V + P                   H    LR  ++   +L +A   L E +   +     
Sbjct: 214 VASPPCSASAGAMQTNSRSPPLHDHDGGFLRHDDDKPRILELATRALDELVGMCSSGEPV 273

Query: 186 WVQMPGMKPGPD------SVGIFAISQSCSG--------VAARACGLVSLEPTKIAEILK 231
           WV+  G++ G D       V +F      SG         A+R CGLV L+  ++     
Sbjct: 274 WVR--GVETGRDILNYDEYVRLFRRDHGGSGDQMAGWTVEASRECGLVYLDTMQLVHTFM 331

Query: 232 DRPSW-------FRDCRSLEVFT-MFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTT 283
           D   W            +LE+ +     G  G ++L+Y +    T + P R+ +  RY  
Sbjct: 332 DVDKWKDLFPTMISKAATLEMISNREDDGRDGVLQLMYAELQTLTPMVPTRELYFARYCK 391

Query: 284 TLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLE 343
            L      + + S   S  G + +SA   VR    PSGCLI   + G   +  V+H    
Sbjct: 392 KLAAERWAIVDVSFDESETGVHASSA---VRCWKNPSGCLIEEQNNGRCKMTWVEHTRCR 448

Query: 344 AWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGF 403
             +V     PLY            A T+  V +G  R  A L+   +R+   F  A N  
Sbjct: 449 RCTVA----PLYR-----------AVTASGVAFGARRWVAALQLQCERMV--FAVATNVP 491

Query: 404 NDDGWSLMTCDGAEDVI-IAVNSTKSLSTASNPTNSLAF 441
             D   + T  G   V+ +A   T SL   +  +  +A+
Sbjct: 492 TRDSTGVSTLAGRRSVLKLAHRMTSSLCRTTGGSRDMAW 530


>gi|33355392|gb|AAQ16126.1| homeodomain protein BNLGHi6313 [Gossypium hirsutum]
          Length = 788

 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 118/561 (21%), Positives = 209/561 (37%), Gaps = 134/561 (23%)

Query: 26  DNG-------KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 78
           DNG       K+ R+   Q+  LE  + ECP P   +R++L R   +    E KQIK WF
Sbjct: 90  DNGRPPKKKKKFHRHNPHQIHELESFFKECPHPDEKQRRELSRRLAL----ESKQIKFWF 145

Query: 79  QNRRCREK---QRKEASRLQTVNRKLTAMNKL---------------------------- 107
           QNRR + K   +R E   L+  N KL A N L                            
Sbjct: 146 QNRRTQMKTQLERHENVFLKQENDKLRAENDLLRQAIASAICNNCGVPAVPDEISYEPSQ 205

Query: 108 LMEENDRLQKQVSQL-VCENGYMKQQLRTAPATT--------DASCDSVV---------- 148
           LM EN RL+ ++++     N ++ + L ++ A          +++ + VV          
Sbjct: 206 LMIENSRLKDELNRARALTNKFLGRHLSSSSANPSPSPSQGLNSNVEVVVRRTGFCGLNN 265

Query: 149 -------------------TTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
                                P  +     + + L+ +A   + E +  A      W++ 
Sbjct: 266 GSISLPMGFEFGHGATMPLMNPSFAYEMPYDKSALVDVALAAMDELIKMAQMGNPLWIK- 324

Query: 190 PGMKPGPDSVGIFAISQSCSGV-----------AARACGLVSLEPTKIAEILKDRPSW-- 236
            G   G +++ +    ++ S             A R   +V L    + + L D   W  
Sbjct: 325 -GFGDGMETLNLEEYKRTFSSFIGMKPSGFTTEATRETAMVPLRGLALVDTLMDANRWAE 383

Query: 237 FRDCRSLEVFTM--FPAGNAGT----IELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSL 290
              C      T+    +G   T    ++L+  +    + L P R    +R+     +   
Sbjct: 384 MFPCMISRAVTIDVLSSGKGVTRDNALQLMEAEFQVLSPLVPIRQVQFIRFCKQHSDSVW 443

Query: 291 VVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEV 350
            + + S++ S    N A+A  F     LPSGC+I+  D   S +  V+H   +  +V  +
Sbjct: 444 AIVDVSINLS----NAANALMFANCRRLPSGCVIQDMDNKYSKVTWVEHSEYDESTVHHL 499

Query: 351 LRPLYESSKVVAQRMTIA---------------ETSGEVVYGLGRQPAVLRTFSQRLSRG 395
            RPL  S      +  IA               +  GE +  +G++  +    +QR++  
Sbjct: 500 FRPLLSSGFGFGAQRWIATLRRQYSSLAQLMSPDIHGEDINTVGKKSML--KLAQRMAYN 557

Query: 396 FNDAVNGFNDDGW-SLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLL 454
           F+  +   + + W  L   +  EDV   V + K+++    P        GI+ + A+ + 
Sbjct: 558 FSAGIGASSVNKWDKLNVGNVGEDV--RVMTRKNVNDPGEPL-------GIVLSAATSVW 608

Query: 455 QNVPPALLVRFLREH--RSEW 473
             +    L  FLR    R++W
Sbjct: 609 MPITQQTLFGFLRNERMRNQW 629


>gi|224071383|ref|XP_002303433.1| predicted protein [Populus trichocarpa]
 gi|222840865|gb|EEE78412.1| predicted protein [Populus trichocarpa]
          Length = 774

 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 142/704 (20%), Positives = 271/704 (38%), Gaps = 158/704 (22%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 89  RYHRHTAAQIQEMEAMFKECPHPDDKQRMRLSQEL----GLKPRQVKFWFQNRRTQMKAQ 144

Query: 89  KEAS-----------------RLQTVNRKLTAMN------------KLLMEENDRLQKQV 119
           ++ S                 RLQ   R L   N            + L  EN RL+ ++
Sbjct: 145 QDRSDNLILRAENESLKNDNYRLQAELRNLICPNCGGQAMLGAIPFEELRLENARLRDEL 204

Query: 120 SQLVC-ENGYMKQQLRT-------APATTD--------------ASCDSVVTTPQHSLRD 157
            ++ C  + Y  +Q+ +        P + D               +C  ++  P   L +
Sbjct: 205 ERVCCITSRYGGRQIHSMVPVPSFVPPSLDLDMNMYSRPFPEYLGTCTDMMPVPVPVLEE 264

Query: 158 ANN--PAGL----------LSIAEETLAEFLSKATGTAVDWV-------------QMPGM 192
            ++   AG+          + +A  ++ E +         W+             +   M
Sbjct: 265 PSSFPEAGVVLMEEGKGLAMELALSSMDELVKMCHANEPLWIRNIENGKEVLNLEEHGRM 324

Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEV 245
            P P ++     S      A R C +V +    + +   D   W           ++++V
Sbjct: 325 FPWPSNLK--QNSSETRTEATRDCAVVIMNSITLVDAFLDANKWMELFPSIVARAKTVQV 382

Query: 246 FTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYT-TTLDNGSLVVCERSLSGSGAGP 304
            T   +G +G++ L+Y +    + L P R+ + LR+    ++ G+  + +  L       
Sbjct: 383 ITPGISGASGSLHLMYAELQVLSPLVPTRETYFLRFCHQNVEEGTWAIVDFPLDRLHDNI 442

Query: 305 NPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL-RPLYESSKVVAQ 363
            P+    F   +  PSGC+I+    G S +  ++H  +E   V ++  + +Y      A 
Sbjct: 443 QPS----FPLYKRHPSGCVIQDMPNGYSRVTWIEHAEIEEKPVHQIFSQYVYSGMAFGAH 498

Query: 364 R-MTIAETSGEVVYG--------LGRQPA-----VLRTFSQRLSRGFNDAVNGFNDDGWS 409
           R +T+ +   E V          LG  P+      +   +QR+ R F+  ++  +   W+
Sbjct: 499 RWLTVLQRQCERVASLMARNISDLGVIPSPEARKNMMRLAQRMIRIFSLNISSSSGQSWT 558

Query: 410 LMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR-E 468
            ++ D  +D +    +T+ ++    P        G++ +  S      P   +   LR E
Sbjct: 559 GLS-DSYDDTVRI--TTRKITEPGQPN-------GVILSAVSTTWLPYPHYQVFDLLRDE 608

Query: 469 HRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELL--EVIRLE 526
           HR    +      +  +L   ++   G  P        I    ++ +H EL+  E    +
Sbjct: 609 HRRSQLEL---LSNGNALHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQECCTDQ 665

Query: 527 GHSLAQEDAFVSRDIHLLQIC-SGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIP 585
             SL     + + D+  +Q+  SG D + +                   PLLP GF I+P
Sbjct: 666 SGSLV---VYTTVDVESIQLAMSGEDPSCI-------------------PLLPLGFVIVP 703

Query: 586 LDSKT--------PDTPDTLTAHRTLD--LTSSLEVGPATNPAA 619
           ++S +        P   +    H      LT  L+V  +T P+A
Sbjct: 704 VESSSAVSEGNSMPSNSEDGNGHNNSGCLLTVGLQVLASTIPSA 747


>gi|449445947|ref|XP_004140733.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
          Length = 706

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 164/763 (21%), Positives = 279/763 (36%), Gaps = 211/763 (27%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-- 87
           Y R+   Q++ LE  + +CP P   +R+QL RE      +E KQIK WFQN+R + K   
Sbjct: 27  YHRHNPYQIQQLESFFRQCPHPDENQRRQLSREL----GLETKQIKFWFQNKRTQTKAQN 82

Query: 88  --------RKEASRLQTVN-----------------------------RKLTAMNKLLME 110
                   R E  ++Q  N                             +KL   N  L E
Sbjct: 83  ERADNSSLRTENEKIQCENLAIREALRNVICPSCGGPPFGEEERQRNLQKLRLENSHLKE 142

Query: 111 ENDRLQ--------KQVSQLVCENGYMKQQLRTAPATT----------DASCDSVV---- 148
           E++++         K +SQL      +   L  +P ++          D   D V+    
Sbjct: 143 EHEKVSNLLAKYIGKPISQLESLLPVLGSSLDLSPRSSLTQIVPSPAVDLISDPVILDGA 202

Query: 149 TTPQHS--LRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQ-------------MPGMK 193
            TP  S  + D  N A +L  A   L E +         W++                + 
Sbjct: 203 ATPYQSRGINDLEN-ALMLETAATGLEELIRLLRIDEPLWMKSLNDGRYVLHRDSYEKIF 261

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSL----EVFTMF 249
           P P+       + S    +++A G+V++   ++ +   D   W     ++    E F + 
Sbjct: 262 PRPNHFK----TSSARTESSKALGVVTMSAIQLVDFFLDADKWADLFPTIITNAETFHII 317

Query: 250 ----PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPN 305
               P   +G ++L+Y Q +  + L   RDF  LR+   ++ G  V+ + S         
Sbjct: 318 DPGMPGNRSGALQLMYQQMHIFSPLVSPRDFCFLRHCQQIEFGVWVIVDVSYEIL----- 372

Query: 306 PASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM 365
                   R   LPSGCLI+    G S +  V+H+ ++               K    R+
Sbjct: 373 -KDCVTSARCWRLPSGCLIQEMPNGCSKVTWVEHVEVD--------------DKTQTHRL 417

Query: 366 TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV------ 419
                   + YG  R    L+   +RL+  F D     ++ G  L + +G   +      
Sbjct: 418 YRDLVFNTLAYGADRWLFTLQRMCERLAYTFRDCAPN-HELGGVLTSPEGRRSIMKLSHR 476

Query: 420 -------IIAVNSTKSLSTASNPTNS-----------LAFLGGILCAKASMLLQNVPPAL 461
                  I++++        S   NS           L    G + + A+ L   + P  
Sbjct: 477 MVKNFCGILSMSGKIDFPQLSEVNNSGVRISVRISSELGQPSGTVVSAATSLWLPLQPET 536

Query: 462 LVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLE 521
           +  F R+ ++    ++V +Y    +   ++   G+ P                    L+ 
Sbjct: 537 IFNFFRDEKAR-VQWDVLSY-GNPVHEIAHILTGVHPG------------------NLIS 576

Query: 522 VIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELV-FAPIDE---------MFP 571
           +IR           FV  + ++L +     E+ +     LV +APID            P
Sbjct: 577 IIR----------PFVPTENNMLIL----QESCIDPLGSLVIYAPIDMPAMNIATSGQDP 622

Query: 572 DDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSV 631
            + P+LPSGF +I  D +T                    +G +T+   G  S      S+
Sbjct: 623 SEIPILPSGF-VITGDGRTHSG-----------------IGASTSATLGRPSG-----SL 659

Query: 632 LTIAFQF---PFESNLQDNVATMARQYVRSVIS-SVQRVAMAI 670
           LTIAFQ       S+ Q NV ++A   V ++IS +VQR+ +A+
Sbjct: 660 LTIAFQILVSSVSSSKQLNVESVAT--VNTLISATVQRIKVAL 700


>gi|3831459|gb|AAC69941.1| putative homeodomain transcription factor [Arabidopsis thaliana]
          Length = 721

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 121/533 (22%), Positives = 201/533 (37%), Gaps = 116/533 (21%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           KY R+T  Q+  +E  + ECP P   +R  L  +      ++P QIK WFQN+R + K  
Sbjct: 71  KYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQL----GLDPVQIKFWFQNKRTQNKNQ 126

Query: 87  -QRKEASRLQTVNRKL----------------------TAMNKLLMEE------NDRLQK 117
            +R E S L+ +N  L                      TA+ ++  EE      N RL +
Sbjct: 127 QERFENSELRNLNNHLRSENQRLREAIHQALCPKCGGQTAIGEMTFEEHHLRILNARLTE 186

Query: 118 QVSQLVCENGYMKQ----QLRTAPATT--------DASCDSVVTTPQHSLR-----DANN 160
           ++ QL      + +     +R+ P  +        +    S      HS       DAN 
Sbjct: 187 EIKQLSVTAEKISRLTGIPVRSHPRVSPPNPPPNFEFGMGSKGNVGNHSRETTGPADANT 246

Query: 161 PAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSC-SGV-------- 211
              ++ +A   + E L  A      W  M G      ++ +    ++  +G+        
Sbjct: 247 KPIIMELAFGAMEELLVMAQVAEPLW--MGGFNGTSLALNLDEYEKTFRTGLGPRLGGFR 304

Query: 212 --AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLY 261
             A+R   LV++ PT I E+L     W           R+ E      AGN  G ++++ 
Sbjct: 305 TEASRETALVAMCPTGIVEMLMQENLWSTMFAGIVGRARTHEQIMADAAGNFNGNLQIMS 364

Query: 262 TQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSG 321
            +    + L   R+ + +RY      G   V + S+       N       ++    PSG
Sbjct: 365 AEYQVLSPLVTTRESYFVRYCKQQGEGLWAVVDISIDHLLPNIN-------LKCRRRPSG 417

Query: 322 CLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQ 381
           CLI+    G S +  V+H+ ++      +   L  + +  A    +    G +V    R 
Sbjct: 418 CLIQEMHSGYSKVTWVEHVEVDDAGSYSIFEKLICTGQAFAANRWV----GTLVRQCERI 473

Query: 382 PAVLRT-------------------FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
            ++L T                    ++R++R F   +   N  G ++ +  G E   I 
Sbjct: 474 SSILSTDFQSVDSALTNHGKMSMLKIAERIARTFFAGMT--NATGSTIFS--GVEGEDIR 529

Query: 423 VNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE--HRSEW 473
           V + KS++    P       G I+CA  S  L   PP  +  FLRE  HR  W
Sbjct: 530 VMTMKSVNDPGKPP------GVIICAATSFWLP-APPNTVFDFLREATHRHNW 575


>gi|242080491|ref|XP_002445014.1| hypothetical protein SORBIDRAFT_07g002780 [Sorghum bicolor]
 gi|18481701|gb|AAL73523.1|AF466200_2 OCL5 protein [Sorghum bicolor]
 gi|241941364|gb|EES14509.1| hypothetical protein SORBIDRAFT_07g002780 [Sorghum bicolor]
          Length = 803

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 164/417 (39%), Gaps = 91/417 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + E+L D   W            +LEV +   AGN  G ++L+  +
Sbjct: 350 ASRETVVVIMNHVNLIEMLMDVNQWSTLFSSIVSRAATLEVLSTGVAGNYNGALQLMTAE 409

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+   LRY     +GS  V + S+ G       AS     R    PSGCL
Sbjct: 410 FQMPSPLVPTRESQFLRYCKQHTDGSWAVVDVSVEGL-----RASGQAGARGRRRPSGCL 464

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA------------QRMTIAETS 371
           I+    G S +  V+H+  +   V ++ RPL  S                 +R+  A  S
Sbjct: 465 IQEMPNGYSRVTWVEHVEADDMMVHDLYRPLVCSGLAFGARRWAAALERQCERLASAMAS 524

Query: 372 G------------EVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
           G             VV  +  + ++LR  ++R+   F   V       W+ ++  GAEDV
Sbjct: 525 GVPAGPSSGGDAVGVVTSVEGRRSMLR-LAERMVTSFCGGVTASTTHQWTKLSGSGAEDV 583

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFN 477
              V + KS+     P        GI+   A+     VPPA +  FLR+   RSEW    
Sbjct: 584 --RVMTRKSVDDPGRPP-------GIILNAATSFWLPVPPARVFGFLRDDATRSEW---- 630

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
            D  S                      Q +  + +  +H   + ++R+   +  Q +  +
Sbjct: 631 -DILSNGG-----------------DVQEMAHIANGRDHGNAVSLLRVNNANSNQSNMLI 672

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
                 LQ C     +A G  S +++AP+D +          PD   LLPSGF I+P
Sbjct: 673 ------LQECC---TDATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 718



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + E P P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 102 RYHRHTQHQIQELEAFFKEYPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 157

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           +E       N +L A N+ L  EN R +  ++   C N
Sbjct: 158 QERHE----NMQLRAENEKLRAENARYKDALANASCPN 191


>gi|242054643|ref|XP_002456467.1| hypothetical protein SORBIDRAFT_03g036820 [Sorghum bicolor]
 gi|241928442|gb|EES01587.1| hypothetical protein SORBIDRAFT_03g036820 [Sorghum bicolor]
          Length = 760

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 107/495 (21%), Positives = 196/495 (39%), Gaps = 104/495 (21%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---R 88
           R T++Q+E LE  +S C  P   +R+QL     +L +    Q+K WFQN+R + K    R
Sbjct: 115 RVTSQQLETLEGFFSICAHPDDNQRRQLSESTGLLLH----QVKFWFQNKRTQVKHLNGR 170

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC------------------ENGYMK 130
           +E       N KL   N+ L EEN+RL++  + ++                   E   +K
Sbjct: 171 EE-------NYKLKVENETLKEENNRLKQLQNNIIAPAPCAKCIIDPGRLLLEKEVERLK 223

Query: 131 QQLRTA---------------PATTDASCDSVVTTP--QHSLRDANNPAGLLSIAEETLA 173
           +  +                 P   D++  +    P  ++     ++   L ++A+    
Sbjct: 224 ELNQMLQQELQLLKSMDDGIPPMAMDSAVGNFHLDPLLENIFVVQHDEQMLANLAQNAAQ 283

Query: 174 EFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGV-----------AARACGLVSLE 222
           E L  A  ++  W+ +PG     +++ + A +++  G            A RA  +V L+
Sbjct: 284 ELLILANPSSALWLNVPG--GSFETLNMAAYTETFPGQMSADTITMNTEATRASAVVMLD 341

Query: 223 PTKIAEILKDRPSW---FRDCRSLEVFTMF---PAGNA----GTIELLYTQAYAPTTLAP 272
           P  + E L D  S+   F    S    T     P G      G ++++  +   P+ L  
Sbjct: 342 PKSLVEFLMDAESYGTMFPGLVSAAATTKVYSCPTGREECYDGAMQMMTVELVFPSPLVA 401

Query: 273 ARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGS 332
           AR    +R    L+ G++ V + SL   GA           R   +PSG +I+P      
Sbjct: 402 ARKCTFVRCVKKLEQGAVAVVDVSLD-DGA-----------RCRKMPSGLVIQPIRYNTC 449

Query: 333 IIHIVDHLNLEAWSVPEVLRP------------LYESSKVVAQRMTIAETSGEVVYGLGR 380
            +  +DH+ ++     ++  P            L   ++  A+   + + +   +    R
Sbjct: 450 KVTAIDHVVVDGTITHDLFAPCLSGLLFGARRWLTSMARQCARIRDVFQVTNCTLNVTSR 509

Query: 381 QPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTAS-NPTNSL 439
               +   +  L   F  +V  + +D W+     G E  I  +  T++ ST+S +PT   
Sbjct: 510 GRKTIMKLADNLLASFTSSVTAYPEDAWNFQCGLGTEQDIKIMYKTQNESTSSGSPT--- 566

Query: 440 AFLGGILCAKASMLL 454
                ++CA AS L+
Sbjct: 567 ----AVVCASASFLV 577


>gi|19072102|dbj|BAB85750.1| Roc1 [Oryza sativa]
          Length = 784

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 200/501 (39%), Gaps = 117/501 (23%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSL-------EVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +  + + EIL D   +     S+       EV +   AGN  G ++++  +
Sbjct: 354 ASRHGAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYNGALQVMSME 413

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P+P       +    PSGCL
Sbjct: 414 FQVPSPLVPTRESYFVRYCKNNSDGTWAVVDVSLDS--LRPSPVQ-----KCRRRPSGCL 466

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA------------QRMTIAETS 371
           I+    G S +  V+H+ ++  SV  + +PL  S                 +R+  A  S
Sbjct: 467 IQEMPNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMAS 526

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 527 NIPNGDLGVITSVEGRKS--MLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDV--RVM 582

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+   A+     VPPA +  FLR+   RSEW     D  S
Sbjct: 583 TRKSVDDPGRPP-------GIVLNAATSFWLPVPPAAVFDFLRDETSRSEW-----DILS 630

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
                                 Q +  + +  +H   + ++R+   +  Q +  +     
Sbjct: 631 NGG-----------------AVQEMAHIANGRDHGNSVSLLRVNSANSNQSNMLI----- 668

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDT 593
           L + C+    +A G  S +V+AP+D +          PD   LLPSGF I+P        
Sbjct: 669 LQESCT----DASG--SYVVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-------- 714

Query: 594 PDTLTAHRTLDLTSSLEVGPATN--PAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
                             GP+ N   A G++ S     S+LT+AFQ   +S     ++  
Sbjct: 715 -----------------DGPSGNAQAAVGENGSGSGGGSLLTVAFQILVDSVPTAKLSLG 757

Query: 652 ARQYVRSVIS-SVQRVAMAIC 671
           +   V S+I+ +V+R+  A+C
Sbjct: 758 SVATVNSLIACTVERIKAAVC 778



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 109 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 164

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E       N +L A N  L  EN R ++ +S   C N
Sbjct: 165 HERHE----NAQLRAENDKLRAENMRYKEALSSASCPN 198


>gi|75134886|sp|Q6ZAR0.1|ROC1_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC1; AltName:
           Full=GLABRA 2-like homeobox protein 1; AltName:
           Full=HD-ZIP protein ROC1; AltName: Full=Homeodomain
           transcription factor ROC1; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 1
 gi|38636931|dbj|BAD03194.1| roc1(homeobox protein) [Oryza sativa Japonica Group]
 gi|38637066|dbj|BAD03323.1| roc1(homeobox protein) [Oryza sativa Japonica Group]
          Length = 784

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 200/501 (39%), Gaps = 117/501 (23%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSL-------EVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +  + + EIL D   +     S+       EV +   AGN  G ++++  +
Sbjct: 354 ASRHGAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYNGALQVMSME 413

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P+P       +    PSGCL
Sbjct: 414 FQVPSPLVPTRESYFVRYCKNNSDGTWAVVDVSLDS--LRPSPVQ-----KCRRRPSGCL 466

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA------------QRMTIAETS 371
           I+    G S +  V+H+ ++  SV  + +PL  S                 +R+  A  S
Sbjct: 467 IQEMPNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMAS 526

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 527 NIPNGDLGVITSVEGRKS--MLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDV--RVM 582

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+   A+     VPPA +  FLR+   RSEW     D  S
Sbjct: 583 TRKSVDDPGRPP-------GIVLNAATSFWLPVPPAAVFDFLRDETSRSEW-----DILS 630

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
                                 Q +  + +  +H   + ++R+   +  Q +  +     
Sbjct: 631 NGG-----------------AVQEMAHIANGRDHGNSVSLLRVNSANSNQSNMLI----- 668

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDT 593
           L + C+    +A G  S +V+AP+D +          PD   LLPSGF I+P        
Sbjct: 669 LQESCT----DASG--SYVVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-------- 714

Query: 594 PDTLTAHRTLDLTSSLEVGPATN--PAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
                             GP+ N   A G++ S     S+LT+AFQ   +S     ++  
Sbjct: 715 -----------------DGPSGNAQAAVGENGSGSGGGSLLTVAFQILVDSVPTAKLSLG 757

Query: 652 ARQYVRSVIS-SVQRVAMAIC 671
           +   V S+I+ +V+R+  A+C
Sbjct: 758 SVATVNSLIACTVERIKAAVC 778



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 109 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 164

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E       N +L A N  L  EN R ++ +S   C N
Sbjct: 165 HERHE----NAQLRAENDKLRAENMRYKEALSSASCPN 198


>gi|356533359|ref|XP_003535232.1| PREDICTED: autophagy-related protein 18-like [Glycine max]
          Length = 207

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 4/81 (4%)

Query: 333 IIHIVDHL-NLEAWSVPEVLRPLYESSKVVAQRMTIA-ETSGEVVYGLGRQPAVLRTFSQ 390
           I+  +D + N++A+    +++ L  + K +     IA E+SGE+ YG GRQP VL TFSQ
Sbjct: 125 ILDTIDTMPNIKAFETHNLIKEL--NVKALQHIRQIAQESSGEIEYGGGRQPVVLITFSQ 182

Query: 391 RLSRGFNDAVNGFNDDGWSLM 411
           RL RGFND VNG+ DDGWSLM
Sbjct: 183 RLCRGFNDVVNGYVDDGWSLM 203


>gi|186504743|ref|NP_180796.2| homeobox-leucine zipper protein HDG3 [Arabidopsis thaliana]
 gi|187471166|sp|Q9ZV65.2|HDG3_ARATH RecName: Full=Homeobox-leucine zipper protein HDG3; AltName:
           Full=HD-ZIP protein HDG3; AltName: Full=Homeodomain
           GLABRA 2-like protein 3; AltName: Full=Homeodomain
           transcription factor HDG3; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 3; AltName: Full=Protein UPCURVED
           LEAF 1
 gi|151579839|gb|ABS18315.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|330253580|gb|AEC08674.1| homeobox-leucine zipper protein HDG3 [Arabidopsis thaliana]
          Length = 725

 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 121/537 (22%), Positives = 201/537 (37%), Gaps = 120/537 (22%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           KY R+T  Q+  +E  + ECP P   +R  L  +      ++P QIK WFQN+R + K  
Sbjct: 71  KYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQL----GLDPVQIKFWFQNKRTQNKNQ 126

Query: 87  -QRKEASRLQTVNRKL----------------------TAMNKLLMEE------NDRLQK 117
            +R E S L+ +N  L                      TA+ ++  EE      N RL +
Sbjct: 127 QERFENSELRNLNNHLRSENQRLREAIHQALCPKCGGQTAIGEMTFEEHHLRILNARLTE 186

Query: 118 QVSQLVCENGYMKQ----QLRTAPATT--------DASCDSVVTTPQHSLR-----DANN 160
           ++ QL      + +     +R+ P  +        +    S      HS       DAN 
Sbjct: 187 EIKQLSVTAEKISRLTGIPVRSHPRVSPPNPPPNFEFGMGSKGNVGNHSRETTGPADANT 246

Query: 161 PAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSC-SGV-------- 211
              ++ +A   + E L  A      W  M G      ++ +    ++  +G+        
Sbjct: 247 KPIIMELAFGAMEELLVMAQVAEPLW--MGGFNGTSLALNLDEYEKTFRTGLGPRLGGFR 304

Query: 212 --AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLY 261
             A+R   LV++ PT I E+L     W           R+ E      AGN  G ++++ 
Sbjct: 305 TEASRETALVAMCPTGIVEMLMQENLWSTMFAGIVGRARTHEQIMADAAGNFNGNLQIMS 364

Query: 262 TQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSG 321
            +    + L   R+ + +RY      G   V + S+       N       ++    PSG
Sbjct: 365 AEYQVLSPLVTTRESYFVRYCKQQGEGLWAVVDISIDHLLPNIN-------LKCRRRPSG 417

Query: 322 CLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQ 381
           CLI+    G S +  V+H+ ++      +   L  + +  A    +    G +V    R 
Sbjct: 418 CLIQEMHSGYSKVTWVEHVEVDDAGSYSIFEKLICTGQAFAANRWV----GTLVRQCERI 473

Query: 382 PAVLRT-----------------------FSQRLSRGFNDAVNGFNDDGWSLMTCDGAED 418
            ++L T                        ++R++R F   +   N  G ++ +  G E 
Sbjct: 474 SSILSTDFQSVDSGDHITLTNHGKMSMLKIAERIARTFFAGMT--NATGSTIFS--GVEG 529

Query: 419 VIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE--HRSEW 473
             I V + KS++    P       G I+CA  S  L   PP  +  FLRE  HR  W
Sbjct: 530 EDIRVMTMKSVNDPGKPP------GVIICAATSFWLP-APPNTVFDFLREATHRHNW 579


>gi|147800352|emb|CAN62139.1| hypothetical protein VITISV_039239 [Vitis vinifera]
          Length = 708

 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 161/412 (39%), Gaps = 89/412 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++  +
Sbjct: 284 ASRETAVVIMNHISLVEILMDVNQWSSVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 343

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL    +GP         R    PSGCL
Sbjct: 344 FQVPSPLVPTRENYFVRYCKHHPDGTWAVVDVSLDNLRSGP-------ITRNRRRPSGCL 396

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  +V  + RPL  S      +  +A               
Sbjct: 397 IQELPNGYSKVIWVEHVEVDDRAVHNIYRPLVNSGLAFGAKRWVATLDRQCERLASAMAS 456

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GA+DV   V 
Sbjct: 457 NIPAGDVGVITSPEGRKS--MLKLAERMVMSFCAGVGASTTHTWTTLSGSGADDV--RVM 512

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+ + A+     VPP  +  FLR    RSEW     D  S
Sbjct: 513 TRKSMDDPGRPP-------GIVLSAATSFWIPVPPKRVFDFLRAENSRSEW-----DILS 560

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              L                  Q +  + +  +    + ++R+   + +Q +  +     
Sbjct: 561 NGGL-----------------VQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLI----- 598

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
           L + C+    +  G  S +++AP+D +          PD   LLPSGF I+P
Sbjct: 599 LQESCT----DPTG--SYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILP 644



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 8/96 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 45  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 100

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            E       N  L A N+ L  EN R ++ +S   C
Sbjct: 101 HERHE----NSNLRAENEKLRAENIRYKEALSNATC 132


>gi|242078393|ref|XP_002443965.1| hypothetical protein SORBIDRAFT_07g005180 [Sorghum bicolor]
 gi|241940315|gb|EES13460.1| hypothetical protein SORBIDRAFT_07g005180 [Sorghum bicolor]
          Length = 781

 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 117/501 (23%), Positives = 200/501 (39%), Gaps = 112/501 (22%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSL-------EVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   +     S+       EV +   AG+  G ++++  +
Sbjct: 352 ASRDNAVVIMTRDSLVEILMDANRFAAVFSSIVSRASTHEVLSTGVAGSYNGALQVMSME 411

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P        ++    PSGCL
Sbjct: 412 FQVPSPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRPSP-------VMKCRRRPSGCL 464

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA------------QRMTIAETS 371
           I+    G S +  V+H+ ++  SV  + RPL  S                 +R+  A  S
Sbjct: 465 IQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFGAKRWVGTLDRQCERLASAMAS 524

Query: 372 G------EVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
                   V+  +  + ++L+  ++R+   F   V       W+ ++  GAEDV   V +
Sbjct: 525 NIPNGDLGVITSIEGRKSMLK-LAERMVASFCGGVTASAAHQWTTLSGSGAEDV--RVMT 581

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS+     P        GI+   A+     VPP  +  FLR+   RSEW     D  S 
Sbjct: 582 RKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFDFLRDETSRSEW-----DILSN 629

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
                                Q +  + +  +H   + ++R+   +  Q +  +     L
Sbjct: 630 GG-----------------AVQEMAHIANGRDHGNCVSLLRVNSANSNQSNMLI-----L 667

Query: 544 LQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDTP 594
            + C+    +A G  S +V+AP+D +          PD   LLPSGF I+      PD P
Sbjct: 668 QESCT----DASG--SYVVYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL------PDGP 715

Query: 595 DTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
             +  H      ++LE G                 S+LT+AFQ   +S     ++  +  
Sbjct: 716 PGMAPHGE---GAALETGGG---------------SLLTVAFQILVDSVPTAKLSLGSVA 757

Query: 655 YVRSVIS-SVQRVAMAICPSG 674
            V S+I+ +V+R+  A+C  G
Sbjct: 758 TVNSLIACTVERIKAAVCVEG 778



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 8/96 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 102 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 157

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            E    +  N +L A N  L  EN R ++ +    C
Sbjct: 158 HE----RQENAQLRAENDKLRAENMRYKEALGTASC 189


>gi|222640035|gb|EEE68167.1| hypothetical protein OsJ_26285 [Oryza sativa Japonica Group]
          Length = 577

 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 200/501 (39%), Gaps = 117/501 (23%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSL-------EVFTMFPAGNA-GTIELLYTQ 263
           A+R   +V +  + + EIL D   +     S+       EV +   AGN  G ++++  +
Sbjct: 147 ASRHGAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYNGALQVMSME 206

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P+P       +    PSGCL
Sbjct: 207 FQVPSPLVPTRESYFVRYCKNNSDGTWAVVDVSLDS--LRPSPVQ-----KCRRRPSGCL 259

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA------------QRMTIAETS 371
           I+    G S +  V+H+ ++  SV  + +PL  S                 +R+  A  S
Sbjct: 260 IQEMPNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMAS 319

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 320 NIPNGDLGVITSVEGRKS--MLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDV--RVM 375

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+   A+     VPPA +  FLR+   RSEW     D  S
Sbjct: 376 TRKSVDDPGRPP-------GIVLNAATSFWLPVPPAAVFDFLRDETSRSEW-----DILS 423

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
                                 Q +  + +  +H   + ++R+   +  Q +  +     
Sbjct: 424 NGG-----------------AVQEMAHIANGRDHGNSVSLLRVNSANSNQSNMLI----- 461

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDT 593
           L + C+    +A G  S +V+AP+D +          PD   LLPSGF I+P        
Sbjct: 462 LQESCT----DASG--SYVVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-------- 507

Query: 594 PDTLTAHRTLDLTSSLEVGPATN--PAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
                             GP+ N   A G++ S     S+LT+AFQ   +S     ++  
Sbjct: 508 -----------------DGPSGNAQAAVGENGSGSGGGSLLTVAFQILVDSVPTAKLSLG 550

Query: 652 ARQYVRSVIS-SVQRVAMAIC 671
           +   V S+I+ +V+R+  A+C
Sbjct: 551 SVATVNSLIACTVERIKAAVC 571


>gi|225444363|ref|XP_002266688.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR 2
           [Vitis vinifera]
 gi|302144076|emb|CBI23181.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 161/412 (39%), Gaps = 89/412 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++  +
Sbjct: 302 ASRETAVVIMNHISLVEILMDVNQWSSVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 361

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL    +GP         R    PSGCL
Sbjct: 362 FQVPSPLVPTRENYFVRYCKHHPDGTWAVVDVSLDNLRSGP-------ITRNRRRPSGCL 414

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  +V  + RPL  S      +  +A               
Sbjct: 415 IQELPNGYSKVIWVEHVEVDDRAVHNIYRPLVNSGLAFGAKRWVATLDRQCERLASAMAS 474

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GA+DV   V 
Sbjct: 475 NIPAGDVGVITSPEGRKS--MLKLAERMVMSFCAGVGASTTHTWTTLSGSGADDV--RVM 530

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+ + A+     VPP  +  FLR    RSEW     D  S
Sbjct: 531 TRKSMDDPGRPP-------GIVLSAATSFWIPVPPKRVFDFLRAENSRSEW-----DILS 578

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              L                  Q +  + +  +    + ++R+   + +Q +  +     
Sbjct: 579 NGGL-----------------VQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLI----- 616

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
           L + C+    +  G  S +++AP+D +          PD   LLPSGF I+P
Sbjct: 617 LQESCT----DPTG--SYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILP 662



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 18/129 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 60  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 115

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC----------ENGYMKQQLRTAPA 138
            E       N  L A N+ L  EN R ++ +S   C          E  + +Q LR   A
Sbjct: 116 HERHE----NSNLRAENEKLRAENIRYKEALSNATCPHCGGPASIGEMSFDEQHLRIENA 171

Query: 139 TTDASCDSV 147
                 D +
Sbjct: 172 RLRDEIDRI 180


>gi|312282177|dbj|BAJ33954.1| unnamed protein product [Thellungiella halophila]
          Length = 749

 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 98/411 (23%), Positives = 168/411 (40%), Gaps = 87/411 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++  +
Sbjct: 309 ASRESAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVMTAE 368

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +GS  V + SL      PNP S     R    PSGCL
Sbjct: 369 FQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDS--LRPNPIS-----RTRRRPSGCL 421

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS----------------KVVAQRMTI 367
           I+    G S +  ++H+ ++  SV  + +PL  S                 + +A  M  
Sbjct: 422 IQELPNGYSKVTWIEHMEVDDRSVHTMYKPLVHSGLAFGAKRWVSTLERQCERLASSMAS 481

Query: 368 AETSGE--VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
              +G+  V+     + ++L+  ++R+   F   V       W+ M+  G++DV   V +
Sbjct: 482 NIPAGDLSVITSPEGRKSMLK-LAERMVMSFCSGVGASTAHAWTTMSSTGSDDV--RVMT 538

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS+     P        GI+ + A+     V P  +  FLR+   RSEW     D  S 
Sbjct: 539 RKSMDDPGRPP-------GIVLSAATSFWIPVAPKRVFDFLRDENSRSEW-----DILSN 586

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
             +                  Q +  + +  E    + ++R+   + +Q +  +     L
Sbjct: 587 GGM-----------------VQEMAHIANGREPGNCVSLLRVNSGNSSQSNMLI-----L 624

Query: 544 LQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
            + C+    +A G  S +++AP+D +          PD   LLPSGF I+P
Sbjct: 625 QESCT----DASG--SYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILP 669



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L R+      +EP Q+K WFQN+R + K +
Sbjct: 65  RYHRHTQRQIQELESFFKECPHPDDKQRKELSRDL----GLEPLQVKFWFQNKRTQMKAQ 120

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E       N+ L + N  L  EN+R ++ +S   C N
Sbjct: 121 HERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 154


>gi|164708731|gb|ABY67263.1| homeodomain protein HOX2 [Gossypium arboreum]
          Length = 737

 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 8/121 (6%)

Query: 6   QQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPI 65
           +++ +   ES      +  L   +Y R+TA Q++ LE V+ ECP P   +R +L +E   
Sbjct: 67  KEEMKSGSESELQETTEQPLKKKRYHRHTAHQIQELEAVFKECPHPDDKQRMKLSQEL-- 124

Query: 66  LSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
              ++P+Q+K WFQNRR + K +++ S     N  L A N  L  E  RLQ ++S+LVC 
Sbjct: 125 --GLKPRQVKFWFQNRRTQMKAQQDRSE----NVILRAENDSLKSEFYRLQAELSKLVCP 178

Query: 126 N 126
           N
Sbjct: 179 N 179



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 104/256 (40%), Gaps = 34/256 (13%)

Query: 234 PSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRY---TTTLDNGSL 290
           PS     + ++V +   +G  G ++L+Y + +  + L P R+ + LRY       D    
Sbjct: 361 PSLVARAKCVQVLSQGVSGTNGCLQLMYAELHVLSPLVPTREAYFLRYCQQQNVEDETYW 420

Query: 291 VVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEV 350
            + +  L G     + +    F   +  PSGCLI+    G S +  V+H  +E   + ++
Sbjct: 421 AIVDFPLDGF----HNSLQTSFPLYKRRPSGCLIQDMPNGYSRVTWVEHSEIEEKPIHQI 476

Query: 351 LRPLYESSKVVA----------QRMTIAETSGEVVYGLGRQPA------VLRTFSQRLSR 394
                 S               Q   IA      +  +G  P+      ++R  SQR+ R
Sbjct: 477 FSHFVHSGMAFGANCWLAVLERQCERIASLMATNIPDIGVIPSPDARKNIMR-LSQRMIR 535

Query: 395 GFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLL 454
            F   ++  +   W+ +  D ++D +I   +T+ +S A  P       G ILCA ++  L
Sbjct: 536 TFCVNISSCSGQVWTAVP-DSSDDTVII--TTRKVSEAGQPN------GLILCAVSTTWL 586

Query: 455 QNVPPALLVRFLREHR 470
              P   +   LR+ R
Sbjct: 587 P-YPHHHVFDLLRDER 601


>gi|22475197|gb|AAM97322.1| homeodomain protein GhHOX2 [Gossypium hirsutum]
          Length = 775

 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 8/121 (6%)

Query: 6   QQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPI 65
           +++ +   ES      +  L   +Y R+TA Q++ LE V+ ECP P   +R +L +E   
Sbjct: 67  KEEMKSGSESELQETTEQPLKKKRYHRHTAHQIQELEAVFKECPHPDDKQRMKLSQEL-- 124

Query: 66  LSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
              ++P+Q+K WFQNRR + K +++ S     N  L A N  L  E  RLQ ++S+LVC 
Sbjct: 125 --GLKPRQVKFWFQNRRTQMKAQQDRSE----NGILRAENDSLKSEFYRLQAELSKLVCP 178

Query: 126 N 126
           N
Sbjct: 179 N 179



 Score = 46.2 bits (108), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 32/255 (12%)

Query: 234 PSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRY---TTTLDNGSL 290
           PS     + ++V +   +G  G ++L+Y + +  + L P R+ + LRY       D    
Sbjct: 361 PSIVARAKCVQVISQGVSGTNGCLQLMYAELHVLSPLVPTREAYFLRYCQQQNVEDETYW 420

Query: 291 VVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEV 350
            + +  L G     + +    F   +  PSGCLI+    G S +  V+H  +E   + ++
Sbjct: 421 AIVDFPLDGF----HNSLQTSFPLYKRRPSGCLIQDMPNGYSRVTWVEHAEIEEKPIHQI 476

Query: 351 LRPLYESSKVV-AQR-MTIAETSGEVVYGL--------GRQPA-----VLRTFSQRLSRG 395
                 S     A R + + E   E V  L        G  P+      L   SQR+ R 
Sbjct: 477 FSHFVHSGMAFGANRWLAVLERQCERVASLMATNIPDIGVIPSPEARKNLMRLSQRMIRT 536

Query: 396 FNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQ 455
           F   ++  +   W+ +  D  +D +    +T+ +S A  P       G ILCA ++  L 
Sbjct: 537 FCVNISSCSGQVWTAVP-DSTDDTVRI--TTRKVSEAGQPN------GLILCAVSTTWLP 587

Query: 456 NVPPALLVRFLREHR 470
             P   +   LR+ R
Sbjct: 588 -YPHHHVFDLLRDER 601


>gi|225427116|ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein ROC3 [Vitis vinifera]
 gi|147777871|emb|CAN60291.1| hypothetical protein VITISV_032685 [Vitis vinifera]
 gi|297742043|emb|CBI33830.3| unnamed protein product [Vitis vinifera]
          Length = 798

 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 18/137 (13%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           N+ Q    +Y R+TA Q++ +E ++ ECP P   +R +L +E      ++P+Q+K WFQN
Sbjct: 81  NEQQPKKKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQEL----GLKPRQVKFWFQN 136

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN----------GYMK 130
           RR + K +++ S     N  L A N+ L  EN RLQ  +  ++C N           + +
Sbjct: 137 RRTQMKAQQDRSD----NVILRAENENLKNENYRLQAALRSVICPNCGGPAMLGEIAFDE 192

Query: 131 QQLRTAPATTDASCDSV 147
           QQLR   A      D V
Sbjct: 193 QQLRIENARLKEELDRV 209



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 97/471 (20%), Positives = 182/471 (38%), Gaps = 61/471 (12%)

Query: 234 PSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRY-TTTLDNGSLVV 292
           PS     ++++V +       G++ L+Y +    + L P R+   LRY    +D G+  +
Sbjct: 370 PSIISRAKTVQVLSGVSGHANGSLHLMYAELQVLSPLVPTRETHFLRYCQQNVDEGTWAI 429

Query: 293 CERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLR 352
            +  +        P+      R    PSGC+I+    G S +  V+H ++E   V  +  
Sbjct: 430 VDFPIDSFNDNLQPS----VPRYRRRPSGCIIQDMPNGYSRVTWVEHADVEEKPVHHIFH 485

Query: 353 PLYESSK--------VVAQRMT--IAETSGEVVYGLGRQPA-----VLRTFSQRLSRGFN 397
               S           V QR    +A      +  LG  P+      L   +QR+ R F+
Sbjct: 486 HFVNSGMAFGATRWLAVLQRQCERVASLMARNISDLGVIPSPEARKNLMNLAQRMIRTFS 545

Query: 398 DAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNV 457
             ++  +   W+ ++ D ++D +    +T+ ++    P       G IL A ++  L + 
Sbjct: 546 VNISTSSGQSWTALS-DSSDDTVRI--TTRKITEPGQPN------GVILSAVSTTWLPH- 595

Query: 458 PPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHE 517
           P   +   LR+ R   A  +V + +  SL   ++   G  P        I    ++ ++ 
Sbjct: 596 PHYHVFDLLRDERRR-AQLDVLS-NGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNV 653

Query: 518 ELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLL 577
           EL          + QE        H+  + + +D +A+    +L  +  D   P   PLL
Sbjct: 654 EL----------MLQESCTDQSGSHV--VYTTIDVDAI----QLAMSGED---PSCIPLL 694

Query: 578 PSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQ 637
           P GF I+P+    P+    +        T+     P +    G +S C  T  +  +A  
Sbjct: 695 PMGFAIVPV---VPNNDCNIMT------TTDDNPMPPSGDGNGHNSGCLLTVGLQVLAST 745

Query: 638 FPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSP 688
            P  + L  +  T    ++ + +  +     +ICP   S  +G    P +P
Sbjct: 746 IP-TAKLNLSSVTAINNHLCNTVHQINAALSSICPDNSSSMVGSSTEPAAP 795


>gi|357448567|ref|XP_003594559.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355483607|gb|AES64810.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 699

 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 113/560 (20%), Positives = 202/560 (36%), Gaps = 126/560 (22%)

Query: 16  SSGSINKHQLDNGK---YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPK 72
           S   +N +  D+G+   + R T+ Q   L+    EC  P    R QL  E      +EPK
Sbjct: 11  SGEEVNGNFRDDGEKSSHKRLTSAQTSILKNFMKECHHPDEAERHQLAVEV----GLEPK 66

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC-------- 124
           QIK WFQN+R   K + E     T+ R+    N  +  EN ++++ +   +C        
Sbjct: 67  QIKFWFQNKRTLLKHQHERETNGTLRRE----NDKIRNENLKIKEVLKAKICLDCGGPPF 122

Query: 125 --------------ENGYMKQQLRTAPATTDASCDSVVTTPQ-----HSLRDANNPAGLL 165
                         EN  +KQ+     +   +  +  ++ P+      S++  +      
Sbjct: 123 PMKDHQNFVQDLKQENAQLKQECEKMSSLLASYMEKKISRPEFEQALKSIKSFSRDYECS 182

Query: 166 SIAEETLAEF------------------LSKATGTAVD------------WVQMPGMKPG 195
           S     LA +                  +S+    A+D            WV+ P  + G
Sbjct: 183 SHVHGNLATWGGVLGQTSTQNYDAQKITMSQVVDAAMDELVRLVRVNEPFWVKSPNTQDG 242

Query: 196 -----PDSVGIFAISQSCSGV-----AARACGLVSLEPTKIAEILKDRPSW-------FR 238
                     +F  +    G      +++  GLV +    +  +  D   W         
Sbjct: 243 YTFHRESYEQVFPKNNHFKGANVCEESSKYSGLVKISGIDLVGMFLDSVKWTNLFPTIVT 302

Query: 239 DCRSLEVFTM-FPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL 297
              +++VF +  P    G + L+  + +  + L   R+F  +RY    D G  V+ + S 
Sbjct: 303 KAETIKVFEIGSPGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKFDAGVWVIADVSF 362

Query: 298 SGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNL--------------- 342
             S     P S     R    PSGC+IR    GG ++  V+H+ +               
Sbjct: 363 DSSRPNTAPLS-----RGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYVYRDLVG 417

Query: 343 -------EAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRG 395
                  E+W + E+ R    S     + + + ET G +    GR   +    +QR+ + 
Sbjct: 418 NYNLYGAESW-IKELQRMCERSLGSYVEAIPVEETIGVIQTLEGRNSVI--KLAQRMVKM 474

Query: 396 FNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQ 455
           F +++        + +T      + ++  ST    T S P        G +   A+ L  
Sbjct: 475 FCESLTMPGQLELNHLTLASIGGIRVSFRSTTDDDT-SQPN-------GTIVTAATTLWL 526

Query: 456 NVPPALLVRFLRE--HRSEW 473
            +P   +  FL++   RS+W
Sbjct: 527 PLPALKVFEFLKDPTKRSQW 546


>gi|345193175|tpg|DAA34953.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414867891|tpg|DAA46448.1| TPA: outer cell layer4 isoform 1 [Zea mays]
 gi|414867892|tpg|DAA46449.1| TPA: outer cell layer4 isoform 2 [Zea mays]
          Length = 884

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 25/136 (18%)

Query: 9   QQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSN 68
           QQQQ  +++G          +Y R+TA Q++ +E ++ ECP P   +R +L +E      
Sbjct: 129 QQQQLATANGK-------KKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----G 177

Query: 69  IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN-- 126
           ++P+Q+K WFQNRR + K +++ +     N  L A N+ L  +N RLQ  +  +VC N  
Sbjct: 178 LKPRQVKFWFQNRRTQMKAQQDRAD----NVLLRAENESLKSDNYRLQAAIRNVVCPNCG 233

Query: 127 --------GYMKQQLR 134
                    Y +QQLR
Sbjct: 234 HAAVLGEMSYEEQQLR 249


>gi|190349989|emb|CAQ63375.1| putative HD-ZIP IV family transcription factor OCL4 [Zea mays]
          Length = 881

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 25/136 (18%)

Query: 9   QQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSN 68
           QQQQ  +++G          +Y R+TA Q++ +E ++ ECP P   +R +L +E      
Sbjct: 129 QQQQLATANGK-------KKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----G 177

Query: 69  IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN-- 126
           ++P+Q+K WFQNRR + K +++ +     N  L A N+ L  +N RLQ  +  +VC N  
Sbjct: 178 LKPRQVKFWFQNRRTQMKAQQDRAD----NVLLRAENESLKSDNYRLQAAIRNVVCPNCG 233

Query: 127 --------GYMKQQLR 134
                    Y +QQLR
Sbjct: 234 HAAVLGEMSYEEQQLR 249


>gi|190349991|emb|CAQ63376.1| putative HD-ZIP IV family transcription factor OCL4 [Zea mays]
          Length = 884

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 25/136 (18%)

Query: 9   QQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSN 68
           QQQQ  +++G          +Y R+TA Q++ +E ++ ECP P   +R +L +E      
Sbjct: 129 QQQQLATANGK-------KKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----G 177

Query: 69  IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN-- 126
           ++P+Q+K WFQNRR + K +++ +     N  L A N+ L  +N RLQ  +  +VC N  
Sbjct: 178 LKPRQVKFWFQNRRTQMKAQQDRAD----NVLLRAENESLKSDNYRLQAAIRNVVCPNCG 233

Query: 127 --------GYMKQQLR 134
                    Y +QQLR
Sbjct: 234 HAAVLGEMSYEEQQLR 249


>gi|33355394|gb|AAQ16127.1| homeodomain protein BNLGHi6863 [Gossypium hirsutum]
          Length = 762

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 8/121 (6%)

Query: 6   QQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPI 65
           +++ +   ES      +  L   +Y R+TA Q++ LE V+ ECP P   +R +L +E   
Sbjct: 56  KEEMKSGSESELQETTEQPLKKKRYHRHTAHQIQELEAVFKECPHPDDKQRMKLSQEL-- 113

Query: 66  LSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
              ++P+Q+K WFQNRR + K +++ S     +  L A N  L  E  RLQ ++S+LVC 
Sbjct: 114 --GLKPRQVKFWFQNRRTQMKAQQDRSE----DVILRAENDSLKSEFYRLQAELSKLVCP 167

Query: 126 N 126
           N
Sbjct: 168 N 168



 Score = 46.6 bits (109), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 101/255 (39%), Gaps = 32/255 (12%)

Query: 234 PSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRY---TTTLDNGSL 290
           PS     + ++V +   +G  G ++L+Y + +  + L P R+ + LRY       D    
Sbjct: 348 PSIVARAKCVQVISQGVSGTNGCLQLMYAELHCLSPLVPTREAYFLRYCQQQNVEDETYW 407

Query: 291 VVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEV 350
            + +  L G     + +    F   +  PSGCLI+    G S +  V+H  +E   + ++
Sbjct: 408 AIVDFPLDGF----HNSLQTSFPLYKRRPSGCLIQDMPNGYSRVTWVEHAEIEEKPIHQI 463

Query: 351 LRPLYESSKVVA----------QRMTIAETSGEVVYGLGRQPA-----VLRTFSQRLSRG 395
                 S               Q   IA      +  +G  P+      L   SQR+ R 
Sbjct: 464 FSHFVHSGMAFGANRWLAVLERQCERIASLMATNIPDIGVIPSPEARKNLMRLSQRMIRT 523

Query: 396 FNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQ 455
           F   ++  +   W+ +  D ++D +    +T+ +S A  P       G ILCA ++  L 
Sbjct: 524 FCVNISSCSGQVWTAVP-DSSDDTVRI--TTRKVSEAGQPN------GLILCAVSTTWLP 574

Query: 456 NVPPALLVRFLREHR 470
             P   +   LR+ R
Sbjct: 575 -YPHHHVFDLLRDER 588


>gi|162462576|ref|NP_001105126.1| OCL4 protein [Zea mays]
 gi|37051038|emb|CAB96424.2| OCL4 protein [Zea mays]
          Length = 808

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 25/140 (17%)

Query: 9   QQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSN 68
           QQQQ  +++G          +Y R+TA Q++ +E ++ ECP P   +R +L +E      
Sbjct: 53  QQQQLATANGK-------KKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----G 101

Query: 69  IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN-- 126
           ++P+Q+K WFQNRR + K +++ +     N  L A N+ L  +N RLQ  +  +VC N  
Sbjct: 102 LKPRQVKFWFQNRRTQMKAQQDRAD----NVLLRAENESLKSDNYRLQAAIRNVVCPNCG 157

Query: 127 --------GYMKQQLRTAPA 138
                    Y +QQLR   A
Sbjct: 158 HAAVLGEMSYEEQQLRIENA 177


>gi|345195190|tpg|DAA34960.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414587876|tpg|DAA38447.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 750

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 143/380 (37%), Gaps = 63/380 (16%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR------- 84
           R+T +Q++ LE  + +C  P    RQ+L  +      I  +Q+K WFQNRR +       
Sbjct: 68  RFTVQQLQQLESSFQKCSHPDDEMRQELAAKV----GISARQVKFWFQNRRSQIKVRSCG 123

Query: 85  ---EKQRKEASRLQTVNRKL---------------TAMNKL-LMEENDRLQKQVSQLVCE 125
               K R++ + L   N +L               T M K  LM+EN +L++  S    E
Sbjct: 124 TENNKYRRQNAELLATNMELKEQLKGMTCSRCDAPTIMQKWQLMDENAKLREMYSLASAE 183

Query: 126 NGYMKQQLRTAPATTDASCDSVVTTPQHSLRDAN-------NPAGLLSIAEETLAEFLSK 178
              + Q+    P+      D  + T  + L           N   LLS  E  + EF   
Sbjct: 184 LTKLMQEANLPPSVILE--DMALVTSMNPLSSNASSSRSTINQDELLSYVECAIKEFEML 241

Query: 179 ATGTAVDWVQMPG----------MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAE 228
                  W+   G           +  P   G     +     A R   +V      I +
Sbjct: 242 VRDGTPLWLPTIGGDVLNSKEYACQRFPRLHGTIR-PEGFVVEATRDTAIVKGSAPDIVD 300

Query: 229 ILKDRPSWFRD-------CRSLEVFTM--FPAGNAGTIELLYTQA--YAPTTLAPARDFW 277
           IL D P W++         R+  V     F +GN    ELL         +   P R+  
Sbjct: 301 ILTDVPRWYKAFPCIVAALRAYHVIFSGPFASGNVLIQELLQINVDLSVESPRPPLRNMK 360

Query: 278 TLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIV 337
            LR T    NG  VV + S++    G +    +Q  +  MLPSGCLI+    G   +  +
Sbjct: 361 FLRITKQNANGDFVVVDVSINDV-QGIHEQQGSQH-KHTMLPSGCLIKDKGDGYCQVTWI 418

Query: 338 DHLNLEAWSVPEVLRPLYES 357
            H   E  SVP + R  Y+S
Sbjct: 419 VHAEYEEASVPPLFRQFYQS 438


>gi|18412734|ref|NP_567274.1| homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Arabidopsis
           thaliana]
 gi|75331628|sp|Q93V99.1|PDF2_ARATH RecName: Full=Homeobox-leucine zipper protein PROTODERMAL FACTOR 2;
           AltName: Full=HD-ZIP protein PDF2; AltName:
           Full=Homeodomain transcription factor PDF2
 gi|15983372|gb|AAL11554.1|AF424560_1 AT4g04890/T1J1_3 [Arabidopsis thaliana]
 gi|14276060|dbj|BAB58961.1| protodermal factor2 [Arabidopsis thaliana]
 gi|17064998|gb|AAL32653.1| Unknown protein [Arabidopsis thaliana]
 gi|23197872|gb|AAN15463.1| Unknown protein [Arabidopsis thaliana]
 gi|332657038|gb|AEE82438.1| homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Arabidopsis
           thaliana]
          Length = 743

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 111/496 (22%), Positives = 199/496 (40%), Gaps = 104/496 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++  +
Sbjct: 307 ASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVMTAE 366

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +GS  V + SL       +   +   +R    PSGCL
Sbjct: 367 FQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLD------SLRPSTPILRTRRRPSGCL 420

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGE---------- 373
           I+    G S +  ++H+ ++  SV  + +PL +S      +  +A    +          
Sbjct: 421 IQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMAS 480

Query: 374 -------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNST 426
                  V+     + ++L+  ++R+   F   V       W+ M+  G++DV   V + 
Sbjct: 481 NIPGDLSVITSPEGRKSMLK-LAERMVMSFCSGVGASTAHAWTTMSTTGSDDV--RVMTR 537

Query: 427 KSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSAA 484
           KS+     P        GI+ + A+     V P  +  FLR+   R EW     D  S  
Sbjct: 538 KSMDDPGRPP-------GIVLSAATSFWIPVAPKRVFDFLRDENSRKEW-----DILSNG 585

Query: 485 SLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLL 544
            +                  Q +  + +  E    + ++R+   + +Q +  +     L 
Sbjct: 586 GM-----------------VQEMAHIANGHEPGNCVSLLRVNSGNSSQSNMLI-----LQ 623

Query: 545 QICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDTPD 595
           + C+    +A G  S +++AP+D +          PD   LLPSGF I+P  S      +
Sbjct: 624 ESCT----DASG--SYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGSVGGGDGN 677

Query: 596 TLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
               H+ +  T+S             S SC    S+LT+AFQ   +S     ++  +   
Sbjct: 678 Q---HQEMVSTTS-------------SGSCGG--SLLTVAFQILVDSVPTAKLSLGSVAT 719

Query: 656 VRSVIS-SVQRVAMAI 670
           V S+I  +V+R+  A+
Sbjct: 720 VNSLIKCTVERIKAAV 735



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L R+     N+EP Q+K WFQN+R + K +
Sbjct: 65  RYHRHTQRQIQELESFFKECPHPDDKQRKELSRDL----NLEPLQVKFWFQNKRTQMKAQ 120

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E       N+ L + N  L  EN+R ++ +S   C N
Sbjct: 121 SERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 154


>gi|7267248|emb|CAB81031.1| putative homeotic protein [Arabidopsis thaliana]
          Length = 738

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 111/496 (22%), Positives = 199/496 (40%), Gaps = 104/496 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++  +
Sbjct: 302 ASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVMTAE 361

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +GS  V + SL       +   +   +R    PSGCL
Sbjct: 362 FQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLD------SLRPSTPILRTRRRPSGCL 415

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGE---------- 373
           I+    G S +  ++H+ ++  SV  + +PL +S      +  +A    +          
Sbjct: 416 IQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMAS 475

Query: 374 -------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNST 426
                  V+     + ++L+  ++R+   F   V       W+ M+  G++DV   V + 
Sbjct: 476 NIPGDLSVITSPEGRKSMLK-LAERMVMSFCSGVGASTAHAWTTMSTTGSDDV--RVMTR 532

Query: 427 KSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSAA 484
           KS+     P        GI+ + A+     V P  +  FLR+   R EW     D  S  
Sbjct: 533 KSMDDPGRPP-------GIVLSAATSFWIPVAPKRVFDFLRDENSRKEW-----DILSNG 580

Query: 485 SLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLL 544
            +                  Q +  + +  E    + ++R+   + +Q +  +     L 
Sbjct: 581 GM-----------------VQEMAHIANGHEPGNCVSLLRVNSGNSSQSNMLI-----LQ 618

Query: 545 QICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDTPD 595
           + C+    +A G  S +++AP+D +          PD   LLPSGF I+P  S      +
Sbjct: 619 ESCT----DASG--SYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGSVGGGDGN 672

Query: 596 TLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
               H+ +  T+S             S SC    S+LT+AFQ   +S     ++  +   
Sbjct: 673 Q---HQEMVSTTS-------------SGSCGG--SLLTVAFQILVDSVPTAKLSLGSVAT 714

Query: 656 VRSVIS-SVQRVAMAI 670
           V S+I  +V+R+  A+
Sbjct: 715 VNSLIKCTVERIKAAV 730



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L R+     N+EP Q+K WFQN+R + K +
Sbjct: 60  RYHRHTQRQIQELESFFKECPHPDDKQRKELSRDL----NLEPLQVKFWFQNKRTQMKAQ 115

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E       N+ L + N  L  EN+R ++ +S   C N
Sbjct: 116 SERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 149


>gi|413944021|gb|AFW76670.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 732

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 112/527 (21%), Positives = 194/527 (36%), Gaps = 116/527 (22%)

Query: 43  RVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNR 99
           R++ ECP P   +R  L RE      +EP+QIK WFQNRR + K   +R +   L+  N 
Sbjct: 77  RMFKECPHPDENQRAALSREL----GLEPRQIKFWFQNRRTQMKAQHERADNCFLRAEND 132

Query: 100 KLTAMNKLLME---------------ENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           K+   N  + E               + D   +Q  +L  EN  +K++L    + T    
Sbjct: 133 KIRCENITMREALKNVICPSCGGPPVDEDFFDEQ--KLRMENARLKEELDRVSSITSKYL 190

Query: 145 DSVVT----TPQHSLRDANNPAG------------------------------------- 163
               T     P  S+   +   G                                     
Sbjct: 191 GRPFTQMPPVPTMSVSSLDLSVGGMGSLGGPSLDLDLLSGCSSGLPYQVPAPVTEMERPM 250

Query: 164 LLSIAEETLAEFLSKATGTAVDWVQ-MPGMKPGPDSVGIFAISQSCSGVA---------- 212
           ++ +A   + E +  A      WV+ +PG       VG +    +  G A          
Sbjct: 251 MVDMAARAMDELIRLAQAGEQIWVKGVPGDAREVLDVGTYDSLFAKPGAAFRPPDINVEA 310

Query: 213 ARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGNAGTIELLYTQAY 265
           +R  GLV +    + ++  D   W           ++++V      G + ++ ++Y + +
Sbjct: 311 SRDSGLVFMSAVALVDVFMDTNKWMEFFPGIVSKAQTVDVLVNGLGGRSESLIMMYEELH 370

Query: 266 APTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIR 325
             T + P R+   LRY   ++ G   V + SL G       A      R+  +PSGCLI 
Sbjct: 371 IMTPVVPTRELSFLRYCKQIEQGLWAVADVSLEGQ----RDAHYGVPSRSRRMPSGCLIA 426

Query: 326 PCDGGGSIIHIVDHLNLE-----------------AWSVPEVLRPLYESSKVVAQRMTIA 368
               G S +  V+H+ +E                 A+     L  L  + +  A   T+ 
Sbjct: 427 DMSNGYSKVTWVEHMEIEQMLPINVLYRNLVLSGAAFGAHRWLAALQRACERFASVATLG 486

Query: 369 ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKS 428
               +V          +   SQR+   F  +++      W+L++  G  DV + V++ + 
Sbjct: 487 VPHHDVAGVTPEGKRSMTKLSQRMVSSFCASLSSSPLQRWTLLS--GTTDVSVRVSTHR- 543

Query: 429 LSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
            ST S   N      G++ + A+ +   VP   +  F+R+   RS+W
Sbjct: 544 -STDSGQPN------GVVLSAATSIWLPVPGDHVFAFVRDENARSQW 583


>gi|242034971|ref|XP_002464880.1| hypothetical protein SORBIDRAFT_01g028160 [Sorghum bicolor]
 gi|241918734|gb|EER91878.1| hypothetical protein SORBIDRAFT_01g028160 [Sorghum bicolor]
          Length = 827

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 21/121 (17%)

Query: 27  NGK---YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           NGK   Y R+TA Q++ +E ++ ECP P   +R +L +E      ++P+Q+K WFQNRR 
Sbjct: 83  NGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRT 138

Query: 84  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN----------GYMKQQL 133
           + K +++ +     N  L A N+ L  +N RLQ  +  +VC N           Y +QQL
Sbjct: 139 QMKAQQDRAD----NVLLRAENESLKSDNYRLQAAIRNVVCPNCGHAAVLGEMSYEEQQL 194

Query: 134 R 134
           R
Sbjct: 195 R 195


>gi|356542838|ref|XP_003539872.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 727

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 108/469 (23%), Positives = 185/469 (39%), Gaps = 114/469 (24%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++  +
Sbjct: 301 ASRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 360

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              PT L P R+ + +RY     +G+  V + SL     GP+        R    PSGCL
Sbjct: 361 LQLPTPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPGPS-------ARCRRRPSGCL 413

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++   V  + + L  S      +  +A               
Sbjct: 414 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMAT 473

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V+      W+ ++  GA+DV   V 
Sbjct: 474 NIPTVDVGVITNQDGRKS--MMKLAERMVISFCAGVSASTAHTWTTLSGTGADDV--RVM 529

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+ + A+     VPP  +  FLR+   R+EW   +    +
Sbjct: 530 TRKSVDDPGRPP-------GIVLSAATSFWLPVPPKRVFDFLRDENSRNEWDILS----N 578

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              ++  ++   G    R TG+               + ++R+   + +Q +  +     
Sbjct: 579 GGVVQEMAHIANG----RDTGN--------------CVSLLRVNSANSSQSNMLI----- 615

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDT 593
           L + C+    N+ G  S +++AP+D +          PD   LLPSGF I+         
Sbjct: 616 LQESCT----NSTG--SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL--------- 660

Query: 594 PDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFES 642
           PD  T+H       S  +G  T P+           S+LT+AFQ   +S
Sbjct: 661 PDGTTSH-----NGSGGIG-ETGPSG----------SLLTVAFQILVDS 693



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 57  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 112

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E + L+T N KL A       +N R ++ +S   C N
Sbjct: 113 HERHENTNLRTENEKLRA-------DNMRYREALSNASCPN 146


>gi|125533056|gb|EAY79621.1| hypothetical protein OsI_34765 [Oryza sativa Indica Group]
          Length = 866

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 18/116 (15%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 121 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 176

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN----------GYMKQQLR 134
           ++    +  N  L A N+ L  +N RLQ  +  +VC N           Y +QQLR
Sbjct: 177 QD----RADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLR 228


>gi|18266646|gb|AAL67592.1|AC018929_14 putative outer cell layer homeo domain protein [Oryza sativa
           Japonica Group]
 gi|125575788|gb|EAZ17072.1| hypothetical protein OsJ_32569 [Oryza sativa Japonica Group]
          Length = 866

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 18/116 (15%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 121 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 176

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN----------GYMKQQLR 134
           ++    +  N  L A N+ L  +N RLQ  +  +VC N           Y +QQLR
Sbjct: 177 QD----RADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLR 228


>gi|31339099|dbj|BAC77156.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 879

 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 18/116 (15%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 134 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 189

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN----------GYMKQQLR 134
           ++    +  N  L A N+ L  +N RLQ  +  +VC N           Y +QQLR
Sbjct: 190 QD----RADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLR 241


>gi|27817987|dbj|BAC55751.1| putative DNA-directed RNA polymerase Iia [Oryza sativa Japonica
           Group]
          Length = 286

 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/40 (80%), Positives = 38/40 (95%)

Query: 37  QVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKV 76
           +VEALERVY++CPKP+S RRQQL+ ECPIL+NIEPKQIKV
Sbjct: 125 EVEALERVYTDCPKPTSARRQQLLCECPILANIEPKQIKV 164


>gi|187611428|sp|A2ZAI7.2|ROC3_ORYSI RecName: Full=Homeobox-leucine zipper protein ROC3; AltName:
           Full=GLABR 2-like homeobox protein 3; AltName:
           Full=HD-ZIP protein ROC3; AltName: Full=Homeodomain
           transcription factor ROC3; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 3
          Length = 882

 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 18/116 (15%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 137 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 192

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN----------GYMKQQLR 134
           ++    +  N  L A N+ L  +N RLQ  +  +VC N           Y +QQLR
Sbjct: 193 QD----RADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLR 244


>gi|115483622|ref|NP_001065481.1| Os10g0575600 [Oryza sativa Japonica Group]
 gi|122248972|sp|Q336P2.1|ROC3_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC3; AltName:
           Full=GLABRA 2-like homeobox protein 3; AltName:
           Full=HD-ZIP protein ROC3; AltName: Full=Homeodomain
           transcription factor ROC3; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 3
 gi|78709045|gb|ABB48020.1| OCL4 protein, putative, expressed [Oryza sativa Japonica Group]
 gi|78709046|gb|ABB48021.1| OCL4 protein, putative, expressed [Oryza sativa Japonica Group]
 gi|113640013|dbj|BAF27318.1| Os10g0575600 [Oryza sativa Japonica Group]
          Length = 882

 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 18/116 (15%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 137 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 192

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN----------GYMKQQLR 134
           ++    +  N  L A N+ L  +N RLQ  +  +VC N           Y +QQLR
Sbjct: 193 QD----RADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLR 244


>gi|449468346|ref|XP_004151882.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Cucumis
           sativus]
          Length = 764

 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 24/125 (19%)

Query: 15  SSSGSINKHQLDNG----------KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           + SGS N H+L +G          +Y R+T  Q++ +E  + ECP P   +R++L RE  
Sbjct: 78  TKSGSDNNHELVSGDDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL- 136

Query: 65  ILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQ 121
               +EP Q+K WFQN+R + K   +R E ++L+T N KL A       +N R ++ +S 
Sbjct: 137 ---GLEPLQVKFWFQNKRTQMKNQHERHENTQLRTENEKLRA-------DNMRYREALSN 186

Query: 122 LVCEN 126
             C N
Sbjct: 187 ASCPN 191



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 169/412 (41%), Gaps = 89/412 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++ ++
Sbjct: 346 ASRESAVVIMNHINLVEILMDVNQWSTLFSGIVSRAMTLEVLSTGVAGNYNGALQVMTSE 405

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+ VV + SL      P P      VR    PSGCL
Sbjct: 406 FQVPSPLVPTRESYYVRYCKQHGDGTWVVVDVSLDD--LRPTPG-----VRCRRRPSGCL 458

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA------------QRMTIAETS 371
           I+    G S +  V+H+ ++   V  + + L  S +               +R+  A  +
Sbjct: 459 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGQAFGAKRWVTTLDRQCERLASAMAT 518

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+  +    ++R+   F   V+      W+ ++  GA+DV   V 
Sbjct: 519 NIPTGDVGVITNQEGRKSML--KLAERMVISFCAGVSASTTHTWTTLSGTGADDV--RVM 574

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+ + A+     VPP  +  FLR+   RSEW   +    +
Sbjct: 575 TRKSIDDPGRPH-------GIVLSAATSFWLPVPPKRIFDFLRDENSRSEWDILS----N 623

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              ++  ++   G    R TG+               + ++R+   + +Q +  +     
Sbjct: 624 GGVVQEMAHIANG----RDTGN--------------CVSLLRVNSANSSQSNMLI----- 660

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
           L + C+  D  A    S +++AP+D +          PD   LLPSGF I+P
Sbjct: 661 LQESCT--DPTA----SFVIYAPVDVVAMNLVLNGGDPDYVALLPSGFAILP 706


>gi|125572100|gb|EAZ13615.1| hypothetical protein OsJ_03531 [Oryza sativa Japonica Group]
          Length = 759

 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 107/454 (23%), Positives = 176/454 (38%), Gaps = 64/454 (14%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
           Y R+TAEQ+  +E ++ E P P   +RQQ ++E    S ++ +  K+  ++R  RE  +K
Sbjct: 99  YHRHTAEQIRIMEALFKESPHPDERQRQQAVQERHENSLLKSELEKLQDEHRAMRELAKK 158

Query: 90  EASRLQ-----------TVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP- 137
            +  L                      + L  E  +L+ ++ +L    G        +P 
Sbjct: 159 PSRCLNCGVVATSSDAAAAATAADTREQRLRLEKAKLKAEIERLRGTPGKSAADGIASPP 218

Query: 138 --ATTDASCDSVVTTPQHS-----LRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMP 190
             A+  A   +  + P H      LR  ++   +L +A   L E +   +     WV+  
Sbjct: 219 CSASAGAMQTNSRSPPLHDHDGGFLRHDDDKPRILELATRALDELVGMCSSGEPVWVR-- 276

Query: 191 GMKPGPD------SVGIFAISQSCSG--------VAARACGLVSLEPTKIAEILKDRPSW 236
           G++ G D       V +F      SG         A+R CGLV L+   +     D   W
Sbjct: 277 GVETGRDILNYDEYVRLFRRDHGGSGDQMAGWTVEASRECGLVYLDTMHLVHTFMDVDKW 336

Query: 237 -------FRDCRSLEVFT-MFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNG 288
                       +LE+ +     G  G ++L+Y +    T + P R+ +  RY   L   
Sbjct: 337 KDLFPTMISKAATLEMISNREDDGRDGVLQLMYAELQTLTPMVPTRELYFARYCKKLAAE 396

Query: 289 SLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVP 348
              + + S   S  G + +SA   VR    PSGCLI   + G   +  V+H      +V 
Sbjct: 397 RWAIVDVSFDESETGVHASSA---VRCWKNPSGCLIEEQNNGRCKMTWVEHTRCRRCTVA 453

Query: 349 EVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW 408
               PLY            A T+  V +G  R  A L+   +R+   F  A N    D  
Sbjct: 454 ----PLYR-----------AVTASGVAFGARRWVAALQLQCERMV--FAVATNVPTRDST 496

Query: 409 SLMTCDGAEDVI-IAVNSTKSLSTASNPTNSLAF 441
            + T  G   V+ +A   T SL   +  +  +A+
Sbjct: 497 GVSTLAGRRSVLKLAHRMTSSLCRTTGGSCDMAW 530


>gi|222640586|gb|EEE68718.1| hypothetical protein OsJ_27379 [Oryza sativa Japonica Group]
          Length = 230

 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/40 (80%), Positives = 38/40 (95%)

Query: 37  QVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKV 76
           +VEALERVY++CPKP+S RRQQL+ ECPIL+NIEPKQIKV
Sbjct: 133 EVEALERVYTDCPKPTSARRQQLLCECPILANIEPKQIKV 172


>gi|345195200|tpg|DAA34965.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 611

 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 132/559 (23%), Positives = 204/559 (36%), Gaps = 146/559 (26%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           R+T EQ+  L   Y  C  P +  R+ L  +      +E +Q++ WFQN+R +     +A
Sbjct: 45  RHTLEQIRELRAAYQRCDHPDAPTRRALGAKI----GLEGRQVQYWFQNQRSQ----TQA 96

Query: 92  SRLQTVNRKLTAMNKLLMEENDRLQKQV------------------------SQLVCENG 127
             L   NR +   N  LM EN  L+  +                         +LV EN 
Sbjct: 97  KALAQNNRVVQQENAALMAENASLRHAILTGSCLACGGATTAAAPAELPPESRRLVAENA 156

Query: 128 YMKQQLRTAPATTD------------ASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEF 175
            ++ +   A A  +            A+   VV++   +   A+  A L   AE  + +F
Sbjct: 157 RLRGEYARATALLNQILLSAPAPPGPAAAAVVVSSSSVARPVADRAARLRGHAEAAMDQF 216

Query: 176 LSKAT------------GTAVDW-VQMPGMKPGPDSVGI----FAISQSCSGVAARACGL 218
           L  AT            G A+++ +     K  P   G+    F +       A+RA G+
Sbjct: 217 LLLATKGEPLWLPTTPDGEALNYQLGYKHKKALPVHHGLCPDEFVME------ASRATGV 270

Query: 219 VSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA---------------GNAGT-IELLYT 262
           V    T +   L D   W           MFP+               G  G+ I+L+  
Sbjct: 271 VRASATYLVATLTDARRWSE---------MFPSVVASVTARRDAAISGGVFGSHIQLMNA 321

Query: 263 --QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA----------- 309
             Q ++P  L  + +F  LRYT  +  G   V + S+ G    P    A           
Sbjct: 322 ELQVHSPRLLNRSINF--LRYTKRVAEGRWAVMDVSVDGILGPPGSRVADAAAAAAAANG 379

Query: 310 -----AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQR 364
                A +    +LPSGCL+     G   +  V H   +  +VP + RPL+ S K +   
Sbjct: 380 VTLVPAWYTGCRLLPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPLFRSGKALGAH 439

Query: 365 MTIAET-----------SGEVVYGLGRQPAVLRT--------FSQRLSRGFNDAVNG--- 402
             +A             S +V  G     A + +         +QR+   F  AV+G   
Sbjct: 440 RWLASLQRQCEFLAVLHSSQVSRGGDNTAAAISSMGKRGVLELAQRMVADFYSAVSGPVT 499

Query: 403 ---FNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPP 459
               + D W      GA     AV         S    ++A L  +L A  ++ L N PP
Sbjct: 500 QPSSSIDEWYGSAGAGARRTDTAVR-----MVTSKKAGTVADL--VLSASTTVWLPNTPP 552

Query: 460 ALLVRFLR--EHRSEWADF 476
            L+ R+LR  + R EW  F
Sbjct: 553 QLVFRYLRDDQRRGEWDAF 571


>gi|1881536|gb|AAB49378.1| meristem L1 layer homeobox protein [Arabidopsis thaliana]
          Length = 718

 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 112/506 (22%), Positives = 196/506 (38%), Gaps = 103/506 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +    GN  G ++++  +
Sbjct: 272 ASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLSTGVRGNYNGALQVMTAE 331

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G   V + SL      P         R+   PSGCL
Sbjct: 332 FQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSP-------ITRSRRRPSGCL 384

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGE---------- 373
           I+    G S +  V+H+ ++  SV  + +PL  +      +  +A    +          
Sbjct: 385 IQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMAS 444

Query: 374 --------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
                   V+     + ++L+  ++R+   F   V     D W+ ++  G++DV   V +
Sbjct: 445 NIPACDLSVITSPEGRKSMLK-LAERMVMSFCTGVGASTADAWTTLSTTGSDDV--RVMT 501

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS+     P        GI+ + A+     V P  +  FLR+   RSEW     D  S 
Sbjct: 502 RKSMDDPGRPP-------GIVLSAATSFWIPVAPKRVFDFLRDENSRSEW-----DILSN 549

Query: 484 ASL-KAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
             L +  ++   G  P            G+++       ++R+   +  Q +  +     
Sbjct: 550 GGLVQEMAHIANGRDP------------GNSV------SLLRVNSGNSGQSNMLI----- 586

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP----LDSK 589
           L + C+    +A G  S +++AP+D +          PD   LLPSGF I+P        
Sbjct: 587 LQESCT----DASG--SYVIYAPVDIIAMNVVLSGGDPDYVALLPSGFAILPDGSARGGG 640

Query: 590 TPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVA 649
                            ++LEV   T    G         S+LT+AFQ   +S     ++
Sbjct: 641 GSANASAGAGVEGGGEGNNLEVVTTTGSCGG---------SLLTVAFQILVDSVPTAKLS 691

Query: 650 TMARQYVRSVIS-SVQRVAMAICPSG 674
             +   V S+I  +V+R+  A+   G
Sbjct: 692 LGSVATVNSLIKCTVERIKAALACDG 717



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L RE     ++EP Q+K WFQN+R + K +
Sbjct: 21  RYHRHTQRQIQELESFFKECPHPDDKQRKELSREL----SLEPLQVKFWFQNKRTQMKAQ 76

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E       N+ L + N  L  EN+R +  +S   C N
Sbjct: 77  HERHE----NQILKSENDKLRAENNRYKDALSNATCPN 110


>gi|162462636|ref|NP_001105127.1| outer cell layer5a [Zea mays]
 gi|8920427|emb|CAB96425.1| OCL5 protein [Zea mays]
          Length = 795

 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 185/465 (39%), Gaps = 103/465 (22%)

Query: 244 EVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGA 302
           EV +   AG+  G ++++  +   P+ L P R+ + +RY     +G+  V + SL     
Sbjct: 402 EVLSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRP 461

Query: 303 GPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA 362
            P        ++    PSGCLI+    G S +  V+H+ ++  SV  + RPL  S     
Sbjct: 462 SP-------VIKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFG 514

Query: 363 ------------QRMTIAETSG------EVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFN 404
                       +R+  A  S        V+  +  + ++L+  ++R+   F   V    
Sbjct: 515 AKRWVGTLDRQCERLASAMASNIPNGDLGVITSIEGRKSMLK-LAERMVASFCGGVTASA 573

Query: 405 DDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVR 464
              W+ ++  GAEDV   V + KS+     P        GI+   A+     VPP  +  
Sbjct: 574 AHQWTTLSGSGAEDV--RVMTRKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFD 624

Query: 465 FLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEV 522
           FLR+   RSEW     D  S                      Q +  + +  +H   + +
Sbjct: 625 FLRDETSRSEW-----DILSNGG-----------------AVQEMAHIANGRDHGNCVSL 662

Query: 523 IRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDD 573
           +R+   +  Q +  +     L + C+    +A G  S +V+AP+D +          PD 
Sbjct: 663 LRVNSANSNQSNMLI-----LQESCT----DASG--SYVVYAPVDVVAMNVVLNGGDPDY 711

Query: 574 GPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLT 633
             LLPSGF I+      PD P    A                 P+ G+        S+LT
Sbjct: 712 VALLPSGFAIL------PDGPPPAGAA----------------PSHGEGLDAGGGGSLLT 749

Query: 634 IAFQFPFESNLQDNVATMARQYVRSVIS-SVQRVAMAICPSGLSP 677
           +AFQ   +S     ++  +   V S+I+ +V+R+  A+C    +P
Sbjct: 750 VAFQILVDSVPTGKLSLGSVATVNSLIACTVERIKAAVCAEAGNP 794



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 8/96 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 162

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            E    +  N +L A N  L  EN R ++ +    C
Sbjct: 163 HE----RHENAQLRAENDKLRAENMRYKEALGTASC 194


>gi|413921156|gb|AFW61088.1| outer cell layer5a [Zea mays]
          Length = 785

 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 185/465 (39%), Gaps = 103/465 (22%)

Query: 244 EVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGA 302
           EV +   AG+  G ++++  +   P+ L P R+ + +RY     +G+  V + SL     
Sbjct: 392 EVLSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRP 451

Query: 303 GPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA 362
            P        ++    PSGCLI+    G S +  V+H+ ++  SV  + RPL  S     
Sbjct: 452 SP-------VIKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFG 504

Query: 363 ------------QRMTIAETSG------EVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFN 404
                       +R+  A  S        V+  +  + ++L+  ++R+   F   V    
Sbjct: 505 AKRWVGTLDRQCERLASAMASNIPNGDLGVITSIEGRKSMLK-LAERMVASFCGGVTASA 563

Query: 405 DDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVR 464
              W+ ++  GAEDV   V + KS+     P        GI+   A+     VPP  +  
Sbjct: 564 AHQWTTLSGSGAEDV--RVMTRKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFD 614

Query: 465 FLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEV 522
           FLR+   RSEW     D  S                      Q +  + +  +H   + +
Sbjct: 615 FLRDETSRSEW-----DILSNGG-----------------AVQEMAHIANGRDHGNCVSL 652

Query: 523 IRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDD 573
           +R+   +  Q +  +     L + C+    +A G  S +V+AP+D +          PD 
Sbjct: 653 LRVNSANSNQSNMLI-----LQESCT----DASG--SYVVYAPVDVVAMNVVLNGGDPDY 701

Query: 574 GPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLT 633
             LLPSGF I+      PD P    A                 P+ G+        S+LT
Sbjct: 702 VALLPSGFAIL------PDGPPPAGA----------------APSHGEGLDTGGGGSLLT 739

Query: 634 IAFQFPFESNLQDNVATMARQYVRSVIS-SVQRVAMAICPSGLSP 677
           +AFQ   +S     ++  +   V S+I+ +V+R+  A+C    +P
Sbjct: 740 VAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVCAEAGNP 784



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 8/96 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 96  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 151

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            E    +  N +L A N  L  EN R ++ +    C
Sbjct: 152 HE----RHENAQLRAENDKLRAENMRYKEALGTASC 183


>gi|302763529|ref|XP_002965186.1| hypothetical protein SELMODRAFT_230527 [Selaginella moellendorffii]
 gi|300167419|gb|EFJ34024.1| hypothetical protein SELMODRAFT_230527 [Selaginella moellendorffii]
          Length = 745

 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 22/108 (20%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ ECP P   +RQ+L RE      +EP+Q+K WFQNRR + K +
Sbjct: 50  RYHRHTARQIQEMESLFKECPHPDDKQRQELSREL----GLEPRQVKFWFQNRRTQLKAQ 105

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA 136
           +E +                  EN+ L+ +V +L  EN  M++ +R A
Sbjct: 106 QERA------------------ENNVLRHEVEKLRAENITMREAIRNA 135



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 120/295 (40%), Gaps = 47/295 (15%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGNAGTIELLYTQA 264
           A R  GLV +    + E+L D   W            +LEV +  P   +GT++L+Y + 
Sbjct: 310 ATRDDGLVMMNAASLVEVLMDPAKWMEMFCTNVSKALTLEVISCAPGSLSGTLQLMYAEI 369

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
            A + L   R+ + LRY     + +  V + S+ G    P+PAS    +     PSG LI
Sbjct: 370 QALSPLMQTREVYFLRYCKQHQDSTWAVVDVSVDGLHGTPSPAS----LHCRRSPSGMLI 425

Query: 325 R-------PCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAE-------- 369
           +           G S + +V+H+  +   V ++ + L  S      R  +A         
Sbjct: 426 QDMPDSIHDMPNGCSKVVVVEHMEYDDQPVHQLFKSLVSSGGAFGARKWLATLQRQCEAL 485

Query: 370 -------TSGEVVYGLGRQPA--VLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI 420
                   S   +  +   PA   L   SQR++  F   V G     W+ ++    +D  
Sbjct: 486 TCYLPGLASAREIGVIPNSPARQSLLKLSQRMTTNFCAGV-GAPSSQWTTLSGSVHDD-- 542

Query: 421 IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR-EH-RSEW 473
           I V + KS+     P        GI+ + A+ L   + PA +  +LR EH RSEW
Sbjct: 543 IRVMTRKSVDNPGEPH-------GIVLSAATTLWLPLAPARVFDYLRSEHLRSEW 590


>gi|302757697|ref|XP_002962272.1| hypothetical protein SELMODRAFT_140884 [Selaginella moellendorffii]
 gi|109729918|tpg|DAA05773.1| TPA_inf: class IV HD-Zip protein HDZ43 [Selaginella moellendorffii]
 gi|300170931|gb|EFJ37532.1| hypothetical protein SELMODRAFT_140884 [Selaginella moellendorffii]
          Length = 745

 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 22/108 (20%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ ECP P   +RQ+L RE      +EP+Q+K WFQNRR + K +
Sbjct: 50  RYHRHTARQIQEMESLFKECPHPDDKQRQELSREL----GLEPRQVKFWFQNRRTQLKAQ 105

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA 136
           +E +                  EN+ L+ +V +L  EN  M++ +R A
Sbjct: 106 QERA------------------ENNVLRHEVEKLRAENITMREAIRNA 135



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 120/295 (40%), Gaps = 47/295 (15%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGNAGTIELLYTQA 264
           A R  GLV +    + E+L D   W            +LEV +  P   +GT++L+Y + 
Sbjct: 310 ATRDDGLVMMNAASLVEVLMDPAKWMEMFCTNVSKALTLEVISCAPGSLSGTLQLMYAEI 369

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
            A + L   R+ + LRY     + +  V + S+ G    P+PAS    +     PSG LI
Sbjct: 370 QALSPLMQTREVYFLRYCKQHQDSTWAVVDVSVDGLHGTPSPAS----LHCRRSPSGMLI 425

Query: 325 R-------PCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAE-------- 369
           +           G S + +V+H+  +   V ++ + L  S      R  +A         
Sbjct: 426 QDMPDSIHDMPNGCSKVVVVEHMEYDDQPVHQLFKSLVSSGGAFGARKWLATLQRQCEAL 485

Query: 370 -------TSGEVVYGLGRQPA--VLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI 420
                   S   +  +   PA   L   SQR++  F   V G     W+ ++    +D  
Sbjct: 486 TCYLPGLASAREIGVIPNSPARQSLLKLSQRMTTNFCAGV-GAPSSQWTTLSGSVHDD-- 542

Query: 421 IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR-EH-RSEW 473
           I V + KS+     P        GI+ + A+ L   + PA +  +LR EH RSEW
Sbjct: 543 IRVMTRKSVDNPGEPH-------GIVLSAATTLWLPLAPARVFDYLRSEHLRSEW 590


>gi|449530169|ref|XP_004172068.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like, partial [Cucumis sativus]
          Length = 468

 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 24/125 (19%)

Query: 15  SSSGSINKHQLDNG----------KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           + SGS N H+L +G          +Y R+T  Q++ +E  + ECP P   +R++L RE  
Sbjct: 78  TKSGSDNNHELVSGDDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL- 136

Query: 65  ILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQ 121
               +EP Q+K WFQN+R + K   +R E ++L+T N KL A       +N R ++ +S 
Sbjct: 137 ---GLEPLQVKFWFQNKRTQMKNQHERHENTQLRTENEKLRA-------DNMRYREALSN 186

Query: 122 LVCEN 126
             C N
Sbjct: 187 ASCPN 191



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 15/129 (11%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++ ++
Sbjct: 346 ASRESAVVIMNHINLVEILMDVNQWSTLFSGIVSRAMTLEVLSTGVAGNYNGALQVMTSE 405

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+ VV + SL      P P      VR    PSGCL
Sbjct: 406 FQVPSPLVPTRESYYVRYCKQHGDGTWVVVDVSL--DDLRPTPG-----VRCRRRPSGCL 458

Query: 324 IRPCDGGGS 332
           I+    G S
Sbjct: 459 IQEMPNGYS 467


>gi|224028395|gb|ACN33273.1| unknown [Zea mays]
 gi|345194178|tpg|DAA34954.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413921155|gb|AFW61087.1| outer cell layer5a [Zea mays]
          Length = 796

 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 185/465 (39%), Gaps = 103/465 (22%)

Query: 244 EVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGA 302
           EV +   AG+  G ++++  +   P+ L P R+ + +RY     +G+  V + SL     
Sbjct: 403 EVLSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRP 462

Query: 303 GPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA 362
            P        ++    PSGCLI+    G S +  V+H+ ++  SV  + RPL  S     
Sbjct: 463 SP-------VIKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFG 515

Query: 363 ------------QRMTIAETSG------EVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFN 404
                       +R+  A  S        V+  +  + ++L+  ++R+   F   V    
Sbjct: 516 AKRWVGTLDRQCERLASAMASNIPNGDLGVITSIEGRKSMLK-LAERMVASFCGGVTASA 574

Query: 405 DDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVR 464
              W+ ++  GAEDV   V + KS+     P        GI+   A+     VPP  +  
Sbjct: 575 AHQWTTLSGSGAEDV--RVMTRKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFD 625

Query: 465 FLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEV 522
           FLR+   RSEW     D  S                      Q +  + +  +H   + +
Sbjct: 626 FLRDETSRSEW-----DILSNGG-----------------AVQEMAHIANGRDHGNCVSL 663

Query: 523 IRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDD 573
           +R+   +  Q +  +     L + C+    +A G  S +V+AP+D +          PD 
Sbjct: 664 LRVNSANSNQSNMLI-----LQESCT----DASG--SYVVYAPVDVVAMNVVLNGGDPDY 712

Query: 574 GPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLT 633
             LLPSGF I+      PD P    A                 P+ G+        S+LT
Sbjct: 713 VALLPSGFAIL------PDGPPPAGAA----------------PSHGEGLDTGGGGSLLT 750

Query: 634 IAFQFPFESNLQDNVATMARQYVRSVIS-SVQRVAMAICPSGLSP 677
           +AFQ   +S     ++  +   V S+I+ +V+R+  A+C    +P
Sbjct: 751 VAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVCAEAGNP 795



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 8/96 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 162

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            E    +  N +L A N  L  EN R ++ +    C
Sbjct: 163 HE----RHENAQLRAENDKLRAENMRYKEALGTASC 194


>gi|224138204|ref|XP_002326544.1| predicted protein [Populus trichocarpa]
 gi|222833866|gb|EEE72343.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 126/639 (19%), Positives = 240/639 (37%), Gaps = 132/639 (20%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 87
           +Y R+TA Q++ +E ++ ECP P   +R +L  E      ++P+Q+K WFQNRR + K  
Sbjct: 35  RYHRHTARQIQEMEAMFKECPHPDDKQRMRLSHEL----GLKPRQVKFWFQNRRTQMKAQ 90

Query: 88  ---------RKEASRLQTVNRKLTAMNKLLM-------------------EENDRLQKQV 119
                    R E   LQ  N +L A  + L+                    E+ RL++++
Sbjct: 91  QDRSDNNILRAENESLQNDNYRLQAELRNLICPDCGGQAMLGEIPFEDLRLEHARLREEL 150

Query: 120 SQLVC-ENGYMKQQLRTAPATT------DASCDSVVTTPQHSLRDANNPAGL-LSIAEET 171
            ++ C  + Y  + + +    T              + P+  +       GL + +A  +
Sbjct: 151 ERVCCIASRYGGRPIHSMSLGTCIDMMPMPMLPEPSSFPEAGIVLMEEGEGLAMGLALSS 210

Query: 172 LAEFLSKATGTAVDWV-------------QMPGMKPGPDSVGIFAISQSCSGV---AARA 215
           + E +         W+             +   M P P +     + Q+ S +   A R 
Sbjct: 211 MDELVKMCNANEPLWITNNENGKEVLNLEEHARMFPWPSN-----LKQNSSDMRTEATRD 265

Query: 216 CGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGNAGTIELLYTQAYAPT 268
           C +V +    + +   D   W           ++++V      G +G++ L+Y +    +
Sbjct: 266 CAVVIMNSINLVDAFLDANKWMELFPSIVARAKTVQVIKTGVCGASGSLHLMYAELQVLS 325

Query: 269 TLAPARDFWTLRY-TTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPC 327
            L P R+   LR+    ++ G+  + +  L        P+    F      PSGC+I+  
Sbjct: 326 PLVPTRETHFLRFCQQNVEEGTWAIVDFPLDSFHDNIRPS----FPLYRRRPSGCVIQDL 381

Query: 328 DGGGSIIHIVDHLNLEAWSVPEVL-RPLYESSKVVAQRM---------TIAETSGEVVYG 377
             G S +  ++H  +E   V ++  + +Y      A R           +A      +  
Sbjct: 382 PNGYSKLTWIEHAEIEDKPVHQIFSQYIYSGMAFGAHRWLAVLQRQCERVASLMARNISD 441

Query: 378 LGRQPA-----VLRTFSQRLSRGFNDAVNGFNDDGWSLM--TCDGAEDVIIAVNSTKSLS 430
           LG  P+      +   +QR+ R F+  ++  +   W+ +  + DG   +I     ++ ++
Sbjct: 442 LGVIPSPEARKNMMRLAQRMIRTFSLNISTSSGQSWTALPDSHDGTVRII-----SREIT 496

Query: 431 TASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR-EHRSEWADFNVDAYSAASLKAG 489
               P        G++ +  S      P  L+   LR EHR    +      +  +L   
Sbjct: 497 EPGQPN-------GVILSAVSTTWLPYPHFLVFDLLRDEHRRSQLEV---LSNGNALHEV 546

Query: 490 SYAYPGMRPTRFTGSQIIMPLGHTIEHEELL--EVIRLEGHSLAQEDAFVSRDIHLLQIC 547
           ++   G  P        I    ++ +H +L+  E    +  SL     F + D+  +Q+ 
Sbjct: 547 AHIANGSHPGNCISLLRINVASNSSQHVDLMLQESCTDQSGSLV---VFTTVDVESIQLA 603

Query: 548 -SGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIP 585
            SG D + +                   PLLP GF I+P
Sbjct: 604 MSGEDPSCI-------------------PLLPLGFVIVP 623


>gi|383131484|gb|AFG46558.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131486|gb|AFG46559.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131488|gb|AFG46560.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131490|gb|AFG46561.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131492|gb|AFG46562.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131494|gb|AFG46563.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131496|gb|AFG46564.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
          Length = 68

 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 50/70 (71%), Gaps = 3/70 (4%)

Query: 580 GFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFP 639
           GFR+IPL+S+T  +      +RTLDL S+LEVG      +GDS +  + RSVLTIAFQF 
Sbjct: 1   GFRVIPLESRTDGSGG---PNRTLDLASALEVGSTGTRTSGDSGTSSNLRSVLTIAFQFT 57

Query: 640 FESNLQDNVA 649
           +ES+L++NVA
Sbjct: 58  YESHLRENVA 67


>gi|242072358|ref|XP_002446115.1| hypothetical protein SORBIDRAFT_06g001940 [Sorghum bicolor]
 gi|241937298|gb|EES10443.1| hypothetical protein SORBIDRAFT_06g001940 [Sorghum bicolor]
          Length = 775

 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 103/448 (22%), Positives = 156/448 (34%), Gaps = 98/448 (21%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNG----KYVRYTAEQVEALERVYSECPKPSSLRR 56
           M  ++ ++     + ++G   +H ++NG    +  R+  EQ++ LE  + EC  P    R
Sbjct: 27  MDALMGEEDHLNNDKATGG-EEHNINNGSSSKRSKRFNVEQLQQLESSFQECTHPDDAMR 85

Query: 57  QQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ--------------------- 95
               RE      IE +Q+K WFQNRR + K    A   +                     
Sbjct: 86  ----RELAARVGIETRQVKFWFQNRRTQTKHSSAAGTAEDGSRALDAAAPALALTLALAA 141

Query: 96  ---------TVNRKLTAMNKLLMEENDRLQKQVS------------QLVCENGYMKQQLR 134
                    T N K    N  L+ EN  L K+++            QL+ EN  +K+  +
Sbjct: 142 GAAAVKSYATENNKFRQQNADLLAENMELHKELTCSRCRDPTAEKWQLLDENAKLKEMCQ 201

Query: 135 TAPATTDASCDSV-----VTTPQHSLRDANNP----------------AGLLSIAEETLA 173
            A A       +      VT    +L  + NP                  LLS AE  + 
Sbjct: 202 RANADLTKLIQAADRPPSVTPEDLALVTSMNPLSSNVGNSSSSTNNLQVTLLSYAECAIK 261

Query: 174 EFLSKATGTAVDWVQMPGMK----------PGPDSVGIFAISQSCSGVAARACGLVSLEP 223
           EF   A      W+ + G              P   GI    Q     A R   LV    
Sbjct: 262 EFDILARNGPPLWLPIIGGNMLNIQEYTRLRFPRLHGI--CPQGFVVEATRDTALVRGTA 319

Query: 224 TKIAEILKDRPSWF----------RDCRSLEVFTMFPAGNAGTIELLYTQA--YAPTTLA 271
           + +  IL + P WF          RD  ++    +F +GN    ELL         +   
Sbjct: 320 SDLLGILTNVPRWFETFPGIVAAVRDYHNVSS-GIFGSGNGLIQELLQINVDLSVESPCP 378

Query: 272 PARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGG 331
           P R    LR +    NG   V + S++G        S  +     +LPSGCLI+    G 
Sbjct: 379 PLRSMKFLRISMQTANGDFAVVDVSINGVHE-QEAGSKNKHTSCRLLPSGCLIQDMGDGH 437

Query: 332 SIIHIVDHLNLEAWSVPEVLRPLYESSK 359
             +  + H       VP + R  + S +
Sbjct: 438 CQVTWIVHAEYNETIVPPIFRQFFGSGQ 465


>gi|4455283|emb|CAB36819.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
 gi|7268972|emb|CAB81282.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
          Length = 718

 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 112/506 (22%), Positives = 196/506 (38%), Gaps = 103/506 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++  +
Sbjct: 272 ASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLSTGVAGNYNGALQVMTAE 331

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G   V + SL      P         R+   PSGCL
Sbjct: 332 FQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSP-------ITRSRRRPSGCL 384

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGE---------- 373
           I+    G S +  V+H+ ++  SV  + +PL  +      +  +A    +          
Sbjct: 385 IQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMAS 444

Query: 374 --------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
                   V+     + ++L+  ++R+   F   V       W+ ++  G++DV   V +
Sbjct: 445 NIPACDLSVITSPEGRKSMLK-LAERMVMSFCTGVGASTAHAWTTLSTTGSDDV--RVMT 501

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS+     P        GI+ + A+     V P  +  FLR+   RSEW     D  S 
Sbjct: 502 RKSMDDPGRPP-------GIVLSAATSFWIPVAPKRVFDFLRDENSRSEW-----DILSN 549

Query: 484 ASL-KAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
             L +  ++   G  P            G+++       ++R+   +  Q +  +     
Sbjct: 550 GGLVQEMAHIANGRDP------------GNSV------SLLRVNSGNSGQSNMLI----- 586

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP----LDSK 589
           L + C+    +A G  S +++AP+D +          PD   LLPSGF I+P        
Sbjct: 587 LQESCT----DASG--SYVIYAPVDIIAMNVVLSGGDPDYVALLPSGFAILPDGSARGGG 640

Query: 590 TPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVA 649
                            ++LEV   T    G         S+LT+AFQ   +S     ++
Sbjct: 641 GSANASAGAGVEGGGEGNNLEVVTTTGSCGG---------SLLTVAFQILVDSVPTAKLS 691

Query: 650 TMARQYVRSVIS-SVQRVAMAICPSG 674
             +   V S+I  +V+R+  A+   G
Sbjct: 692 LGSVATVNSLIKCTVERIKAALACDG 717



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L RE     ++EP Q+K WFQN+R + K +
Sbjct: 21  RYHRHTQRQIQELESFFKECPHPDDKQRKELSREL----SLEPLQVKFWFQNKRTQMKAQ 76

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E       N+ L + N  L  EN+R +  +S   C N
Sbjct: 77  HERHE----NQILKSENDKLRAENNRYKDALSNATCPN 110


>gi|22328861|ref|NP_193906.2| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|79325215|ref|NP_001031692.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|75330714|sp|Q8RWU4.1|ATML1_ARATH RecName: Full=Homeobox-leucine zipper protein MERISTEM L1; AltName:
           Full=HD-ZIP protein ATML1; AltName: Full=Homeodomain
           transcription factor ATML1
 gi|20268701|gb|AAM14054.1| putative L1-specific homeobox gene ATML1/ovule-specific homeobox
           protein A20 [Arabidopsis thaliana]
 gi|23297714|gb|AAN12908.1| putative L1-specific homeobox gene ATML1/ovule-specific homeobox
           protein A20 [Arabidopsis thaliana]
 gi|110739777|dbj|BAF01795.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
 gi|332659098|gb|AEE84498.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|332659099|gb|AEE84499.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
          Length = 762

 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 112/506 (22%), Positives = 196/506 (38%), Gaps = 103/506 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++  +
Sbjct: 316 ASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLSTGVAGNYNGALQVMTAE 375

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G   V + SL      P         R+   PSGCL
Sbjct: 376 FQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSP-------ITRSRRRPSGCL 428

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGE---------- 373
           I+    G S +  V+H+ ++  SV  + +PL  +      +  +A    +          
Sbjct: 429 IQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMAS 488

Query: 374 --------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
                   V+     + ++L+  ++R+   F   V       W+ ++  G++DV   V +
Sbjct: 489 NIPACDLSVITSPEGRKSMLK-LAERMVMSFCTGVGASTAHAWTTLSTTGSDDV--RVMT 545

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS+     P        GI+ + A+     V P  +  FLR+   RSEW     D  S 
Sbjct: 546 RKSMDDPGRPP-------GIVLSAATSFWIPVAPKRVFDFLRDENSRSEW-----DILSN 593

Query: 484 ASL-KAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
             L +  ++   G  P            G+++       ++R+   +  Q +  +     
Sbjct: 594 GGLVQEMAHIANGRDP------------GNSV------SLLRVNSGNSGQSNMLI----- 630

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP----LDSK 589
           L + C+    +A G  S +++AP+D +          PD   LLPSGF I+P        
Sbjct: 631 LQESCT----DASG--SYVIYAPVDIIAMNVVLSGGDPDYVALLPSGFAILPDGSARGGG 684

Query: 590 TPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVA 649
                            ++LEV   T    G         S+LT+AFQ   +S     ++
Sbjct: 685 GSANASAGAGVEGGGEGNNLEVVTTTGSCGG---------SLLTVAFQILVDSVPTAKLS 735

Query: 650 TMARQYVRSVIS-SVQRVAMAICPSG 674
             +   V S+I  +V+R+  A+   G
Sbjct: 736 LGSVATVNSLIKCTVERIKAALACDG 761



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L RE     ++EP Q+K WFQN+R + K +
Sbjct: 65  RYHRHTQRQIQELESFFKECPHPDDKQRKELSREL----SLEPLQVKFWFQNKRTQMKAQ 120

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E       N+ L + N  L  EN+R +  +S   C N
Sbjct: 121 HERHE----NQILKSENDKLRAENNRYKDALSNATCPN 154


>gi|449530931|ref|XP_004172445.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis
           sativus]
          Length = 812

 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 11/124 (8%)

Query: 4   VIQQQQQQQRESS---SGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           ++++ Q  + ES+   + SI +      +Y R+TA Q++ +E ++ ECP P   +R +L 
Sbjct: 70  LVEENQGIEMESNINNNDSITQQNQKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLS 129

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           +E      ++P+Q+K WFQNRR + K +++ S     N  L A N+ L  EN RLQ  + 
Sbjct: 130 QEL----GLKPRQVKFWFQNRRTQMKAQQDRSD----NVILRAENETLKNENYRLQSALR 181

Query: 121 QLVC 124
            ++C
Sbjct: 182 NIIC 185


>gi|449436842|ref|XP_004136201.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis
           sativus]
          Length = 803

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 11/124 (8%)

Query: 4   VIQQQQQQQRESS---SGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           ++++ Q  + ES+   + SI +      +Y R+TA Q++ +E ++ ECP P   +R +L 
Sbjct: 70  LVEENQGIEMESNINNNDSITQQNQKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLS 129

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           +E      ++P+Q+K WFQNRR + K +++ S     N  L A N+ L  EN RLQ  + 
Sbjct: 130 QEL----GLKPRQVKFWFQNRRTQMKAQQDRSD----NVILRAENETLKNENYRLQSALR 181

Query: 121 QLVC 124
            ++C
Sbjct: 182 NIIC 185


>gi|357168220|ref|XP_003581542.1| PREDICTED: homeobox-leucine zipper protein ROC4-like [Brachypodium
           distachyon]
          Length = 790

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 152/687 (22%), Positives = 242/687 (35%), Gaps = 179/687 (26%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-- 87
           YVR+++EQ++ L+ ++ +CP P  ++R +L R       ++P Q+K WFQNRR + K   
Sbjct: 91  YVRHSSEQIQELQALFDKCPHPDEMQRAELSRRL----FLDPSQVKFWFQNRRTQTKAKL 146

Query: 88  --------RKEASRLQTVN----------------------------RKLTAMNKLLMEE 111
                   R+E  RL+  N                            + L A N  L EE
Sbjct: 147 VRDENVQLRQENDRLRAENLCIREAMRHPVCGNCGRPVVLGVLSLEEQHLRAQNARLTEE 206

Query: 112 NDRLQKQVSQLVCENGYMKQQLRT--------------------APATTDASCD------ 145
             R+    S+ + ++  +   L+T                     P+TT AS        
Sbjct: 207 LSRVCAASSEFLGKSISLPAPLQTHQPEPMPGSRVQPAAGGVGSVPSTTVASSTITEFTG 266

Query: 146 --------SVVTTPQHSLRDAN-NPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGP 196
                   +++T  +  L  A  + + LL +A+  + E +  A      W     +   P
Sbjct: 267 TASTSSGTAIMTMSEEPLEIAGIDKSVLLELAKSAMDELVKMAQMEDPLWTPSVSLSDSP 326

Query: 197 DSVGI-----FAISQSCSGV--------AARACGLV-SLEPTKIAEILKDRPSW------ 236
               +           C GV        A+R  G+V S +   + E L D   W      
Sbjct: 327 AKETLNYEEYLNTFSPCIGVKPAGFQSEASRESGIVISDDSVALVEALMDERRWSNIFSC 386

Query: 237 --FRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCE 294
              +     E+ T       G + L+  +    + L P R    LR+   L  G+  V +
Sbjct: 387 MVAKSSTIAEISTGVAGSRDGALLLIQAELQVLSPLVPIRKATFLRFCKQLGEGAWAVVD 446

Query: 295 RSLSG--SGAGPNPASAAQFVRAEMLPSGCLI-RPCDGGGSIIHIVDHLNLEAWSVPEVL 351
            S+ G     G   AS    +    LPSGCL+ +    G   +  V+H   +  SV  + 
Sbjct: 447 VSIDGLVVDQGLAAASTTANMNCRRLPSGCLVQQDTRNGFCKVKWVEHAEYDESSVHPLY 506

Query: 352 RPLYESSKVVAQRMTIA-------------------ETSGEVVYGLGRQPAVLRTFSQRL 392
           R L  S   +     +A                   E     V   G Q   L   +QR+
Sbjct: 507 RSLLRSGLALGAGRWLATLQRQCKCWATLQSCVAAWEQYSSDVLAAGTQS--LLKLAQRM 564

Query: 393 SRGFNDAVNGFNDDGWSLMTCDGAEDVI---IAVNSTKSLSTASNPTNSLAFLGGILCAK 449
              F   V+  +   WS +  DG  D I   + +   KS+     P       G +LCA 
Sbjct: 565 MESFFSGVSASSALEWSKL--DGFTDNIGNDVRIIERKSVDEPGVPP------GVVLCAA 616

Query: 450 ASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQII 507
            S+ +  V P  L +FL +   R+EW                S   P    T     Q  
Sbjct: 617 TSVWML-VTPERLFQFLCDEGTRAEWDIL-------------STGGPMQEVTNIAKGQ-- 660

Query: 508 MPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPID 567
                  +    + ++R    +  Q    +     L + C+    +A G  S +V+AP+D
Sbjct: 661 -------QDGNTVSLLRTNTTNTQQNGILI-----LQETCT----DASG--SMVVYAPVD 702

Query: 568 ----EMFPDDG-----PLLPSGFRIIP 585
                +    G     PLLPSGF I+P
Sbjct: 703 IPAMHLVMSGGDSASVPLLPSGFVILP 729


>gi|449515643|ref|XP_004164858.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           HDG2-like [Cucumis sativus]
          Length = 760

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 99/429 (23%), Positives = 164/429 (38%), Gaps = 92/429 (21%)

Query: 196 PDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTM 248
           P  +G      SC   A+RA  +V +    + E+L D   W            +LEV + 
Sbjct: 319 PRGIGPKPSGFSCE--ASRATAVVIMNHISLVEMLMDVNQWSTTFTGIVSRAMTLEVLST 376

Query: 249 FPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA 307
             AGN  G ++++ ++   P+ L P R+ + +RY      G+  V + SL      P PA
Sbjct: 377 GVAGNYNGALQVMTSELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDT--LRPAPA 434

Query: 308 SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI 367
                +R    PSGCLI+    G S +  V+H+ ++   V  +   L  S      +  I
Sbjct: 435 -----LRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWI 489

Query: 368 AE--------------------TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDG 407
           A                      +G +    GR+  +    ++R+   F   V+      
Sbjct: 490 ATLDRQCERLASAMATSIIPHGDAGVITNQEGRKSML--KLAERMVMSFCGGVSASTTHT 547

Query: 408 WSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR 467
           W+ ++  GA+DV   V + KS+     P+       GI+ + A+     +PP  +  FLR
Sbjct: 548 WTTLSGTGADDV--RVMTRKSVDDPGRPS-------GIVLSAATSFWLPLPPNRVFHFLR 598

Query: 468 EH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRL 525
           +   R+EW     D  S                       ++  + H     +    + L
Sbjct: 599 DENSRNEW-----DILSNGG--------------------VVQEMAHIANGRDTGNCVSL 633

Query: 526 EGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPL 576
               L    A  S+   L+   S  D+ A    S +++AP+D +          PD   L
Sbjct: 634 ----LRVNSANSSQSNMLILQESSTDQTA----SFVIYAPVDIVSINVVLNGGDPDYVAL 685

Query: 577 LPSGFRIIP 585
           LPSGF I+P
Sbjct: 686 LPSGFAILP 694



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE     N+EP Q+K WFQN+R + K  
Sbjct: 87  RYHRHTQHQIQQMEAFFKECPHPDDKQRKELSREL----NLEPLQVKFWFQNKRTQMKTH 142

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E ++L+T N KL A       +N R ++ +S   C N
Sbjct: 143 HERHENTQLRTENEKLRA-------DNMRYREALSNATCPN 176


>gi|361069599|gb|AEW09111.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
          Length = 68

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 50/70 (71%), Gaps = 3/70 (4%)

Query: 580 GFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFP 639
           GFR+IPL+S+T  +      +RTLDL S+LEVG      +GDS +  + RSVLTIAFQF 
Sbjct: 1   GFRVIPLESRTDGSGG---PNRTLDLASALEVGSTGTRTSGDSGTNSNLRSVLTIAFQFT 57

Query: 640 FESNLQDNVA 649
           +ES+L++NVA
Sbjct: 58  YESHLRENVA 67


>gi|449453486|ref|XP_004144488.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Cucumis
           sativus]
          Length = 761

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 99/429 (23%), Positives = 164/429 (38%), Gaps = 92/429 (21%)

Query: 196 PDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTM 248
           P  +G      SC   A+RA  +V +    + E+L D   W            +LEV + 
Sbjct: 319 PRGIGPKPSGFSCE--ASRATAVVIMNHISLVEMLMDVNQWSTTFTGIVSRAMTLEVLST 376

Query: 249 FPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA 307
             AGN  G ++++ ++   P+ L P R+ + +RY      G+  V + SL      P PA
Sbjct: 377 GVAGNYNGALQVMTSELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDT--LRPAPA 434

Query: 308 SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI 367
                +R    PSGCLI+    G S +  V+H+ ++   V  +   L  S      +  I
Sbjct: 435 -----LRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWI 489

Query: 368 AE--------------------TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDG 407
           A                      +G +    GR+   +   ++R+   F   V+      
Sbjct: 490 ATLDRQCERLASAMATSIIPNGDAGVITNQEGRKS--MLKLAERMVMSFCGGVSASTTHT 547

Query: 408 WSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR 467
           W+ ++  GA+DV   V + KS+     P+       GI+ + A+     +PP  +  FLR
Sbjct: 548 WTTLSGTGADDV--RVMTRKSVDDPGRPS-------GIVLSAATSFWLPLPPNRVFHFLR 598

Query: 468 EH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRL 525
           +   R+EW     D  S                       ++  + H     +    + L
Sbjct: 599 DENSRNEW-----DILSNGG--------------------VVQEMAHIANGRDTGNCVSL 633

Query: 526 EGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPL 576
               L    A  S+   L+   S  D+ A    S +++AP+D +          PD   L
Sbjct: 634 ----LRVNSANSSQSNMLILQESSTDQTA----SFVIYAPVDIVSINVVLNGGDPDYVAL 685

Query: 577 LPSGFRIIP 585
           LPSGF I+P
Sbjct: 686 LPSGFAILP 694



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE     N+EP Q+K WFQN+R + K  
Sbjct: 87  RYHRHTQHQIQQMEAFFKECPHPDDKQRKELSREL----NLEPLQVKFWFQNKRTQMKTH 142

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E ++L+T N KL A       +N R ++ +S   C N
Sbjct: 143 HERHENTQLRTENEKLRA-------DNMRYREALSNATCPN 176


>gi|357480751|ref|XP_003610661.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355511996|gb|AES93619.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 735

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 159/770 (20%), Positives = 271/770 (35%), Gaps = 201/770 (26%)

Query: 33  YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE-- 90
           +T +Q++ ++  + +CP P+  +R    RE  + + ++P QIK WFQNRR   K      
Sbjct: 40  HTQQQIDEMDTFFKQCPNPNDAQR----RELSLRTGLDPTQIKFWFQNRRTSLKHDNVIF 95

Query: 91  -----------------ASRLQT---VNRKLTAMNKLLMEENDRLQKQVSQL--VC---- 124
                            A+ +QT    N  L   N+ L +E DR +  +S    VC    
Sbjct: 96  TVIYIALQWRPDAVANIAATVQTDRDENELLKIENEKLRDELDRYKGAISTTCKVCGSSS 155

Query: 125 ---ENGYMKQQLRTAPATTDASCDSVV-TTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 180
              E  + +QQLR   A      +  V  TP  S  +  +      +A  +    ++   
Sbjct: 156 NAGEMSHEEQQLRLENALLRKELERFVGETPTDSRANITSSNNSTHVASHSTDFGVAGGN 215

Query: 181 GTAVDWVQMPGMKPGPDSVGIFAISQSCS------------------------------- 209
             A   +   G+  G  SV I  +++                                  
Sbjct: 216 NGASHRMVGEGLSVGGSSVQIKGLNEKQKIVELAVVGMDELTKLARTYGPPLWIPTNYVT 275

Query: 210 --------------GVAARACGL----------VSLEPTKIAEILKDRPSW-------FR 238
                         G     CGL          V +    + +IL D   W         
Sbjct: 276 EILNGEEYMKYFPRGNGPNTCGLRLEGSKESVVVMINAPDLVDILMDVNQWSNMFCGIVS 335

Query: 239 DCRSLEVFTMFPAGNA-GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL 297
              +LEV +    GN  G ++++  +   P+   P R    +RY     +G  VV + SL
Sbjct: 336 RAATLEVLSTGVGGNYDGALQVMTAEFQVPSPHVPTRQNHFVRYCKLHPDGIWVVADVSL 395

Query: 298 S-GSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYE 356
              + A  + +S++   R    PSGCLI     G + +  ++++ ++   V  + +PL  
Sbjct: 396 HLLNAASASSSSSSTASRTNRRPSGCLIETLPNGLTKVTWIENVEVDDQVVQNIYKPLVN 455

Query: 357 SSKVVAQR---MTIAETSGEVVY----GLGRQPAVLRT---------FSQRLSRGFNDAV 400
           S      +    T+   S  + +     + R+  V  T          ++RL   F+ ++
Sbjct: 456 SGLAFGAKRWVATLHRQSDRLFFRTATNVPREHHVRLTPEGKKSILNLAERLVASFSTSI 515

Query: 401 NGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPA 460
                  W+ +  +G E V++        S+   P +       +L A  S  L  VPP 
Sbjct: 516 GSSTTHAWTKVPGNGPEVVMVMTKRYIDESSIDKPVSV------VLSAATSFWLP-VPPR 568

Query: 461 LLVRFLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEE 518
            +  FLR+   R  W     D  SA                      I+  L H     +
Sbjct: 569 RVFDFLRDQNTRKHW-----DILSAGG--------------------IVHELAHISNGRD 603

Query: 519 ---LLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPID-----EMF 570
               + + R+   +  Q D  V     L + C+ V        S +V+AP+      E+ 
Sbjct: 604 SGNYVSLFRITSENSEQSDVVV-----LQENCTDV------TGSYVVYAPVQIPTMHEIL 652

Query: 571 PDDGP----LLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCH 626
                    LLPSGF I P    T                     GP  N  +G      
Sbjct: 653 NGGDSSRLTLLPSGFAIFPDGCITNG-------------------GPIMNVGSGG----- 688

Query: 627 HTRSVLTIAFQFPFESNLQDNVATMARQYVRSVI-SSVQRVAMAICPSGL 675
              S++T+AFQ   +S     +A  +   V ++I ++V+R+  A+ P+G+
Sbjct: 689 ---SLVTVAFQIIVDSIPHARLALGSITTVNTLIKNTVERIRTAVMPNGI 735


>gi|356540579|ref|XP_003538765.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 732

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 109/498 (21%), Positives = 193/498 (38%), Gaps = 116/498 (23%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + +IL D   W            +LEV +   AGN  G ++++ ++
Sbjct: 305 ASRESVVVIMNHINLIDILMDVNQWSTVFCGIVSRALTLEVLSTGVAGNYNGALQVMSSE 364

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G   V + SL      PN  S     R+   PSGCL
Sbjct: 365 FQVPSPLVPTRENYFVRYCKQQPDGIWAVVDVSLDN--LRPNTIS-----RSRRRPSGCL 417

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGE---------- 373
           I+    G S +  ++H+ ++  +V  + RPL  S      +  +A    +          
Sbjct: 418 IQELPNGYSKVTWIEHVEVDDRAVHSIYRPLVNSGLAFGAKRWVATLDRQCERLASSMAN 477

Query: 374 ---------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                    +    GR+   +   ++R+   +   V       W+ ++  G +DV   V 
Sbjct: 478 NIPAGDLCVITSAEGRKS--MMKLAERMVMSYCTGVGASTAHAWTTLSATGCDDV--RVM 533

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS      P        GI+ + A+     VPP  +  FLR+   R+EW     D  S
Sbjct: 534 TRKSTDEPGRPP-------GIVLSAATSFWLPVPPNRVFDFLRDENSRNEW-----DILS 581

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              L                  Q +  + +  +    + ++R+   + +Q +  +     
Sbjct: 582 NGGL-----------------VQELAHIANGRDPGNCVSLLRVNSANSSQSNMLI----- 619

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDT 593
           L + C+    ++ G  S +V+AP+D +          PD   LLPSGF I+      PD 
Sbjct: 620 LQESCT----DSTG--SYVVYAPVDIVAMNVVLSGGDPDYVALLPSGFAIL------PDG 667

Query: 594 PDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMAR 653
           P  L              GP     +G         S+LT+ FQ   +S     ++  + 
Sbjct: 668 PPALNG------------GPMHEVGSGG--------SLLTVGFQILVDSAPTAKLSLGSV 707

Query: 654 QYVRSVIS-SVQRVAMAI 670
             V S+I  +V+R+ +A+
Sbjct: 708 ATVNSLIKCTVERIKVAV 725



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 14/100 (14%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T  Q+E +E  + + P P   +R++L RE      +EP Q+K WFQN+R + K   
Sbjct: 66  YRRHTQRQIEEMEAFFKQFPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQH 121

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           +R E + L+T N KL A       EN+R ++ +S   C N
Sbjct: 122 ERNENAILKTENEKLRA-------ENNRYKEALSNATCPN 154


>gi|1208940|gb|AAC37514.1| homeodomain protein 1 [Helianthus annuus]
          Length = 682

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 121/528 (22%), Positives = 206/528 (39%), Gaps = 112/528 (21%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+TA+Q+  +E ++ E P P   +RQQL +       + P+Q+K WFQNRR + K   
Sbjct: 99  YHRHTADQIREMEALFKESPHPDEKQRQQLSKRL----GLHPRQVKFWFQNRRTQIKTIQ 154

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN-GYM-----------KQQLR 134
           +R E S L++   KL   NKLL E        + +  C N G+            +QQLR
Sbjct: 155 ERHENSLLKSELDKLGEENKLLRE-------TIKKGTCTNCGFGSSSKDVHTYVDEQQLR 207

Query: 135 TAPATTDASCDSVVTTP------QHSLR-------DANNP------AGLLSIAEETL--- 172
              A   A  + +          +H  R       D  N       +GL  + +  +   
Sbjct: 208 VENAKLRAEIEKLRNISWGNIHREHHQRNSCSVGNDHENKSSLDLCSGLFGLEKSRVNGG 267

Query: 173 ------AEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGV-AARACGLVSLEPTK 225
                   F+  A+  A  WV+   ++ G + +         S V ++    L  +E ++
Sbjct: 268 CRSGLWKSFVQMASAGAPLWVK--SLETGREILNYDEYLTKFSTVDSSNVQRLRFIEASR 325

Query: 226 IAEIL-KDRPSWFRDCRSLEVFT-MFPA--GNAGTIE---------------LLYTQAYA 266
            + ++  D P   R    ++ F  MFP     A T++               L++ +   
Sbjct: 326 DSGVVFVDLPQLVRSFMDVKEFKEMFPCMISKAATLDVICNGEGPNRKGAVQLMFAELQM 385

Query: 267 PTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRP 326
            T L   R+ + +RY+  L      + + S+       +    A   R    PSGC+I  
Sbjct: 386 LTPLVATREVYFVRYSKQLTAEKWAIVDVSIDNVEKNID----ASLARCRKRPSGCIIED 441

Query: 327 CDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQR---MTIAETSGEVVY------- 376
              G   +  ++H   +      + R +  S      R    T+ +    +V+       
Sbjct: 442 KSNGHCKVTWIEHWECQKSVSHSMFRAIINSGLAFGARNWMATLQQQCERLVFFLATNVP 501

Query: 377 -----GLGR---QPAVLRTFSQRLS-RGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
                G+G    + ++L+  +QR++ R    A+   +   W  +      D+     S K
Sbjct: 502 TKDSCGIGTLAGRKSILK-LAQRMNVRVLVRALGASSYHTWKKIPSKTGYDIRA---SRK 557

Query: 428 SLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           +L+ A  P      LG ILCA +S+ L  V   LL  FLR+   R+EW
Sbjct: 558 NLNDAGEP------LGVILCAVSSIWLP-VSHTLLFDFLRDETRRNEW 598


>gi|345195194|tpg|DAA34962.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413924373|gb|AFW64305.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 698

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 22/112 (19%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q    +Y R+T  Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR 
Sbjct: 15  QRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWFQNRRT 70

Query: 84  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT 135
           + K + E              N  L  END+++       CEN  M++ LR+
Sbjct: 71  QMKAQHERQD-----------NCFLRAENDKIR-------CENIAMREALRS 104



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 116/505 (22%), Positives = 194/505 (38%), Gaps = 121/505 (23%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNAGTIELLYTQA 264
            +R  GLV +    + ++  D   W           R+++V     AG + ++ L+Y + 
Sbjct: 264 GSRDSGLVFMSAVGLVDMFMDSSKWTEFFPAIVSKARTVDVLVNGMAGRSESLVLMYEEL 323

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL------SGSGAGPNPASAAQFVRAEML 318
           +  + + P R+F  LRY   ++ G   + + S+      +  GA P+        R+  L
Sbjct: 324 HVMSPVVPTREFCFLRYCRQIERGLWAIADISVDLQQHDARFGAPPS--------RSCRL 375

Query: 319 PSGCLIRPCDGGGSIIHIVDHLNLE-----------------AWSVPEVLRPLYESSKVV 361
           PSGCLI     G S +  V+H+ +E                 A+     L  L  + +  
Sbjct: 376 PSGCLIADMADGSSKVTWVEHMEIEDRVPIHLLYRDLILSGAAFGAHRWLAALQRACERC 435

Query: 362 AQRMTIAETSGEVVYGLGRQPAVLRT---FSQRLSRGFNDAVNGFNDDGWSLMTCDGAED 418
           A  +       ++    G  P   R+    SQR+   F  +++      W+  T  G  D
Sbjct: 436 ACLVPAGMPHRDIAVA-GVTPEGKRSMMKLSQRMVSSFCASLSASQLHRWT--TLSGPSD 492

Query: 419 VIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR-EH-RSEWADF 476
           V + V   +S +    P+       G++ + A+ +   VP   +  F+R EH RS+W   
Sbjct: 493 VGVRVTVHRS-TDPGQPS-------GVVLSAATSIWLPVPCDRVFAFVRDEHTRSQWDVL 544

Query: 477 NVDAYSAASLKAGSYAYPGMRPTRF-TGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDA 535
                        S+  P    +R   GS      G+ I          L G + +Q   
Sbjct: 545 -------------SHGNPVQEVSRIPNGSHP----GNCIS--------LLRGLNASQNSM 579

Query: 536 FVSRDIHLLQICSGVDENAVGACSELVFAPID---------EMFPDDGPLLPSGFRIIPL 586
            +     L + C+       G  S +V+APID            P   PLLPSGF I+P 
Sbjct: 580 LI-----LQESCTD------GTGSLVVYAPIDIPAANVVMSGEDPSAIPLLPSGFTILP- 627

Query: 587 DSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQD 646
               P  P + +A   L       VG   +PAA          S++T+AFQ    S    
Sbjct: 628 -DGRPGAPSSSSAGGPL-------VG---SPAAAG--------SLVTVAFQILVSSLPSS 668

Query: 647 NVATMARQYVRSVIS-SVQRVAMAI 670
            +   +   V S+IS +V+++  A+
Sbjct: 669 RLNAESVATVNSLISTTVEQIKAAL 693


>gi|413916965|gb|AFW56897.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 798

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 107/465 (23%), Positives = 186/465 (40%), Gaps = 95/465 (20%)

Query: 244 EVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGA 302
           EV +   AG+  G ++++  +   P+ L P R+ +  RY     +G+  V + SL     
Sbjct: 397 EVLSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFARYCKNNPDGTWAVVDVSLDS--L 454

Query: 303 GPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS---- 358
            P+PA     ++    PSGCL++    G S +  V+H+ ++  SV  + RPL  S     
Sbjct: 455 RPSPA-----LKCRRRPSGCLVQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLGFG 509

Query: 359 ------------KVVAQRMTIAETSGE--VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFN 404
                       + +A  M     +G+  V+  +  + ++L+  ++R+   F   V    
Sbjct: 510 ATRWVGTLDRQCERLASAMASNIPNGDLGVITSIEGRKSMLK-LAERMVASFCGGVTASA 568

Query: 405 DDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVR 464
              W+ ++  GAEDV   V + KS+     P        GI+   A+     VPP  +  
Sbjct: 569 AHQWTTLSGSGAEDV--RVMTRKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFD 619

Query: 465 FLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEV 522
           FLR+   RSEW     D  S                      Q +  + +  +H   + +
Sbjct: 620 FLRDETSRSEW-----DILSNGG-----------------AVQEMAHIANGRDHGNCVSL 657

Query: 523 IRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDD 573
           +R+   +  Q +  +     L + C+    +A G  S +V+AP+D +          PD 
Sbjct: 658 LRVNSANSNQSNMLI-----LQESCT----DASG--SYVVYAPVDVVAMNVVLNGGDPDY 706

Query: 574 GPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLT 633
             LLPSGF I+P     P  P     H                             S+LT
Sbjct: 707 VALLPSGFAILP---DGPPAPGMAPHHGGEGAAGGGL-----------EELEAAGGSLLT 752

Query: 634 IAFQFPFESNLQDNVATMARQYVRSVIS-SVQRVAMAICPSGLSP 677
           +AFQ   +S     ++  +   V S+I+ +V+R+  A+C +  +P
Sbjct: 753 VAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVCGAEGNP 797



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q+E +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 106 RYHRHTQHQIEEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 161

Query: 87  -QRKEASRLQTVNRKLTAMN 105
            +R+E ++L+  N KL A N
Sbjct: 162 HERQENAQLRAENDKLRAEN 181


>gi|115440407|ref|NP_001044483.1| Os01g0788800 [Oryza sativa Japonica Group]
 gi|75252913|sp|Q5ZAY0.1|TF1_ORYSJ RecName: Full=Homeobox-leucine zipper protein TF1; AltName:
           Full=HD-ZIP protein TF1; AltName: Full=Homeodomain
           transcription factor TF1; AltName: Full=Protein
           TRANSCRIPTION FACTOR 1; Short=OsTF1
 gi|53792430|dbj|BAD53268.1| transcription factor 1 [Oryza sativa Japonica Group]
 gi|56784272|dbj|BAD81954.1| transcription factor 1 [Oryza sativa Japonica Group]
 gi|113534014|dbj|BAF06397.1| Os01g0788800 [Oryza sativa Japonica Group]
          Length = 709

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 110/516 (21%), Positives = 198/516 (38%), Gaps = 95/516 (18%)

Query: 19  SINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 78
           S N ++    +  R T +Q E LE  +S C  P   +++ L       + +   Q+K WF
Sbjct: 59  SSNTNEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSET----TGLGLDQVKFWF 114

Query: 79  QNRRCREKQR--KEASRLQTVNRKLTAMNKLLMEENDR---------------------L 115
           QN+R + K    KE       N KL+  N++L +EN R                     L
Sbjct: 115 QNKRTQVKTMCWKEE------NYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQL 168

Query: 116 QKQVSQLVCENGYMKQQLRTAPATTDAS--CDSVVTTPQHSLRDANNPAGLLSIAEETLA 173
             ++ +L+ ++ +++Q++  +  T  A+     + ++  +     ++   +  +A+  + 
Sbjct: 169 AVEMERLMGQSEWLQQEIARSNGTPPAANLAFQLNSSADYVFSGQHDQQMIAELAKNAMH 228

Query: 174 EFLSKATGTAVDWVQMPGMK-------------PGPDSVGIFAISQSCSGVAARACGLVS 220
             +  A      W  +PG               PG +S             A RA  +V 
Sbjct: 229 ALIILAESHVALWFPVPGCSYEVLNKMAYDQAYPGDNSANAIGFKTE----ATRAVSMVM 284

Query: 221 LEPTKIAEILKD-------RPSWFRDCRSLEVFTMFPA--GNAGTIELLYTQAYAPTTLA 271
           ++   + + L D        P       +  ++T +P   G  G I+L+  +   P+ L 
Sbjct: 285 MDYKSVVDFLMDPYNYRTFFPEVISGAVTNRIYT-WPTSDGYNGVIQLMTVEMMFPSPLV 343

Query: 272 PARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGG 331
           PAR    LRY   L+ G +VV + SL            + F +   +PSG LI+      
Sbjct: 344 PARKCTFLRYCNVLNEGLVVVIDVSLD---------DGSIFSKCRKMPSGFLIQSIRPNS 394

Query: 332 SIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQR--MTIAETSGEV--VYGLGRQPAVLRT 387
             +  ++H+  +   V E+ +P        A+R   T+A  S  +  V+     P V   
Sbjct: 395 CKVTAIEHVLADDTGVHELYQPCMNGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTK 454

Query: 388 FSQRLSRGFNDAVNGF-------NDDGWSLMTCDGAE-DVIIAVNSTKSLSTASNPTNSL 439
             + L +  +D +  F           W+++   G E D+ +A   T   S++ N     
Sbjct: 455 GRKNLMKLADDLLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRRTTEGSSSYN----- 509

Query: 440 AFLGGILCAKASMLLQNVPPALLVRFLRE--HRSEW 473
                IL   AS+ L  +P       LR   HR +W
Sbjct: 510 ----AILSVTASLRLP-LPMRKTFDLLRNLTHRCKW 540


>gi|226501626|ref|NP_001145750.1| uncharacterized protein LOC100279257 [Zea mays]
 gi|219884299|gb|ACL52524.1| unknown [Zea mays]
 gi|345195188|tpg|DAA34959.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413916966|gb|AFW56898.1| putative homeobox/lipid-binding domain family protein isoform 1
           [Zea mays]
 gi|413916967|gb|AFW56899.1| putative homeobox/lipid-binding domain family protein isoform 2
           [Zea mays]
          Length = 802

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 107/465 (23%), Positives = 186/465 (40%), Gaps = 95/465 (20%)

Query: 244 EVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGA 302
           EV +   AG+  G ++++  +   P+ L P R+ +  RY     +G+  V + SL     
Sbjct: 401 EVLSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFARYCKNNPDGTWAVVDVSLDS--L 458

Query: 303 GPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS---- 358
            P+PA     ++    PSGCL++    G S +  V+H+ ++  SV  + RPL  S     
Sbjct: 459 RPSPA-----LKCRRRPSGCLVQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLGFG 513

Query: 359 ------------KVVAQRMTIAETSGE--VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFN 404
                       + +A  M     +G+  V+  +  + ++L+  ++R+   F   V    
Sbjct: 514 ATRWVGTLDRQCERLASAMASNIPNGDLGVITSIEGRKSMLK-LAERMVASFCGGVTASA 572

Query: 405 DDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVR 464
              W+ ++  GAEDV   V + KS+     P        GI+   A+     VPP  +  
Sbjct: 573 AHQWTTLSGSGAEDV--RVMTRKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFD 623

Query: 465 FLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEV 522
           FLR+   RSEW     D  S                      Q +  + +  +H   + +
Sbjct: 624 FLRDETSRSEW-----DILSNGG-----------------AVQEMAHIANGRDHGNCVSL 661

Query: 523 IRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDD 573
           +R+   +  Q +  +     L + C+    +A G  S +V+AP+D +          PD 
Sbjct: 662 LRVNSANSNQSNMLI-----LQESCT----DASG--SYVVYAPVDVVAMNVVLNGGDPDY 710

Query: 574 GPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLT 633
             LLPSGF I+P     P  P     H                             S+LT
Sbjct: 711 VALLPSGFAILP---DGPPAPGMAPHHGGEGAAGGGL-----------EELEAAGGSLLT 756

Query: 634 IAFQFPFESNLQDNVATMARQYVRSVIS-SVQRVAMAICPSGLSP 677
           +AFQ   +S     ++  +   V S+I+ +V+R+  A+C +  +P
Sbjct: 757 VAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVCGAEGNP 801



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q+E +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 110 RYHRHTQHQIEEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 165

Query: 87  -QRKEASRLQTVNRKLTAMN 105
            +R+E ++L+  N KL A N
Sbjct: 166 HERQENAQLRAENDKLRAEN 185


>gi|197116175|dbj|BAG68845.1| homeodomain-containing transcription factor FWA [Turritis glabra]
          Length = 683

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 143/666 (21%), Positives = 244/666 (36%), Gaps = 170/666 (25%)

Query: 20  INKHQLDNG-------KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPK 72
           IN    DNG       +  R+TA Q++ LE  Y     P+  +R +L +      N+E K
Sbjct: 27  INAMSCDNGQDGERMRRSHRHTAYQIQELENFYEHNSHPTEDQRYELGQRL----NMEAK 82

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQ---------------- 116
           Q+K WFQN+R + K  +E  RLQ  NR L   +  ++   D+L+                
Sbjct: 83  QVKFWFQNKRTQVKINRE--RLQ--NRALIENHDRMLGAQDKLRCAMLRSSCNICGRATN 138

Query: 117 -----KQVSQLVCENGYMKQQL-------------RTAPATTDASCDS---VVTTPQHSL 155
                 +V +L+ EN  +K+++             + +P+    SC S      TPQ  L
Sbjct: 139 CGDVDYEVQKLMVENNRLKREIDPYSSFLYDPSRVQVSPSEPLPSCSSNPGRNATPQLDL 198

Query: 156 RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGP------DSVGIFAISQSCS 209
              +        A++ +++FL  A  TA+  + + G    P       S  +  + +   
Sbjct: 199 GCGSTS------AKKEISKFLDLAN-TAMKELIVLGEPDCPFWTIDLRSKEVSLVYEKYR 251

Query: 210 GV-------------AARACGLVSLEPTKIAEILKDRPSWFRDCRSL--------EVFTM 248
           GV             A+R  GLV +  + + + L D   W     S+         + T 
Sbjct: 252 GVFNNIIKPPGCVVEASRDTGLVPMTSSTLVKTLMDTGKWVNVFASIVPVSSTHKVIRTG 311

Query: 249 FPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPAS 308
           +    +G+++ +  +    + L P R    LRY   L +G  VV + +         PA 
Sbjct: 312 YGGVKSGSLQQIQAEFQVISPLVPKRQVTFLRYCKELKHGLWVVVDVT---------PAE 362

Query: 309 AAQFVR---AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS------- 358
              F+    +  LPSG +I     G S +  ++        + ++ +PL  S        
Sbjct: 363 YPTFLSYGASNRLPSGLIIEDIANGYSKVTWIEQAEYNESHIHQLYQPLIGSGIGLGAKR 422

Query: 359 ------KVVAQRMTIAETS-GEVVYGLGRQPAV-LRTFSQRLSRGFNDAVNGFNDDGWSL 410
                 +      T+  T+  ++  GL  + A  L   +QR++  +   + G + D W +
Sbjct: 423 WFKTLQRYCGSLSTLTSTNLDQISPGLSAKGATELVKLAQRMTLKYYTGITGSSTDKWEI 482

Query: 411 MTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE-- 468
           +  +     +I         T  N   +  + G +L A  S+    V    L  FL    
Sbjct: 483 IQVENVAQNMI-------FMTRKNLNETGEYTGIVLSAATSVWFP-VNQQTLFAFLSHPS 534

Query: 469 HRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH 528
            R EW                                    L H    EE +   + +GH
Sbjct: 535 FRHEWD----------------------------------ILTHNTSMEETIRFQKAKGH 560

Query: 529 SLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPID--EMFP-------DDGPLLPS 579
                   + R+  L  +   V  +A GA   +V+AP++   + P       D   LLPS
Sbjct: 561 GNIISLLRIIRNGML--VLQEVWNDASGAV--VVYAPVETSSIEPVKRGENSDSVQLLPS 616

Query: 580 GFRIIP 585
           GF I+P
Sbjct: 617 GFSILP 622


>gi|345195184|tpg|DAA34957.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413919601|gb|AFW59533.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 742

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 92/412 (22%), Positives = 158/412 (38%), Gaps = 89/412 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQ 263
           A+R   +V +    + EIL D   +            +LEV +   AGN  G ++++  +
Sbjct: 309 ASRDSAVVIMTHANLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGNYNGALQVMSVE 368

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL G   G         ++    PSGCL
Sbjct: 369 FQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDGLRPG-------AVLKCRRRPSGCL 421

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  SV  + + L  S      R  +                
Sbjct: 422 IQEMPNGYSKVTWVEHVEVDDRSVHSIYKLLVSSGLAFGARRWVGTLDRQCERLASVMAS 481

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 482 NIPTSDIGVITSAEGRKS--MLKLAERMVMSFCGGVTASAAHQWTTLSGSGAEDV--RVM 537

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+   A+     VPP  +  FLR+   RSEW     D  S
Sbjct: 538 TRKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFDFLRDESSRSEW-----DILS 585

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              +                  Q +  + +  +H   + ++R+   +  Q    +     
Sbjct: 586 NGGV-----------------VQEMAHIANGRDHGNCVSLLRVNSTNSNQSSMLI----- 623

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
           L + C+ +      + S +++AP+D +          PD   LLPSGF I+P
Sbjct: 624 LQESCTDM------SGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 669



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 43/205 (20%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           N+      +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN
Sbjct: 39  NQRPSKKKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQN 94

Query: 81  RRCREK---QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP 137
           +R + K   +R+E S+L++ N KL A       EN R ++ +S   C            P
Sbjct: 95  KRTQMKNHHERQENSQLRSENEKLRA-------ENMRYKEALSSASC------------P 135

Query: 138 ATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
           +    +    ++  +H LR          +    L E + + +  A  +V  P M P P 
Sbjct: 136 SCGGPAALGEMSFDEHHLR----------VENARLREEVDRISSIAAKYVGRP-MVPFP- 183

Query: 198 SVGIFAISQSCSGVAARACGLVSLE 222
                 +S   +G  ARA  L  L+
Sbjct: 184 -----VLSSPLAGAGARAPALPPLD 203


>gi|356517624|ref|XP_003527487.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 729

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 93/412 (22%), Positives = 167/412 (40%), Gaps = 89/412 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++  +
Sbjct: 301 ASRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 360

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              PT L P R+ + +RY     +G+  V + SL      P+P++     R    PSGCL
Sbjct: 361 LQLPTPLVPTRESYFVRYCKQHGDGTWAVVDVSLDN--LRPSPSA-----RCRRRPSGCL 413

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++   V  + + L  S      +  +A               
Sbjct: 414 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRLVATLDRQCERLASAMAT 473

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V+      W+ ++  GA+DV   V 
Sbjct: 474 NIPTVDVGVITNQEGRKS--MMKLAERMVISFCAGVSASTAHTWTTLSGTGADDV--RVM 529

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+ + A+     VPP  +  FLR+   R+EW   +    +
Sbjct: 530 TRKSVDDPGRPP-------GIVLSAATSFWLPVPPKRVFDFLRDENSRNEWDILS----N 578

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              ++  ++   G    R TG+               + ++R+   + +Q +  +     
Sbjct: 579 GGVVQEMAHIANG----RDTGN--------------CVSLLRVNSANSSQSNMLI----- 615

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
           L + C+    ++ G  S +++AP+D +          PD   LLPSGF I+P
Sbjct: 616 LQESCT----DSTG--SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 661



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 57  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 112

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E + L+T N KL A       +N R ++ +S   C N
Sbjct: 113 HERHENTNLRTENEKLRA-------DNMRYREALSNASCPN 146


>gi|224069018|ref|XP_002302880.1| predicted protein [Populus trichocarpa]
 gi|222844606|gb|EEE82153.1| predicted protein [Populus trichocarpa]
          Length = 756

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 94/412 (22%), Positives = 163/412 (39%), Gaps = 89/412 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + E L D   W            +LEV +   AGN  G ++++  +
Sbjct: 331 ASRESAVVIMNHINLVEYLMDVNQWSTLFSGIVSRALTLEVLSTGVAGNYNGALQVMTAE 390

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              PT L P R+ + +RY     +G+  V + SL     GP         R    PSGCL
Sbjct: 391 FQLPTPLVPTRESYYVRYCKQHADGTWAVVDVSLDSIRPGP-------AARCRRRPSGCL 443

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAE-------------- 369
           I+    G S +  V+H+ ++   V  + + L  S      +  +A               
Sbjct: 444 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKHLVSSGHAFGAKRWVATLNRQCERLASAMAT 503

Query: 370 -----TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                 +G +    GR+   +   ++R+   F   V+      W+ ++  GA+DV   V 
Sbjct: 504 NIPAGDAGVITNQEGRKS--MMKLAERMVISFCAGVSASTAHTWTTLSGTGADDV--RVM 559

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+ + A+     VPP  +  FLR+   R+EW   +    +
Sbjct: 560 TRKSVDDPGRPP-------GIVLSAATSFWLPVPPKRVFDFLRDENTRNEWDILS----N 608

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              ++  ++   G    R TG+               + +IR+   + +Q +  +     
Sbjct: 609 GGVVQEMAHIANG----RDTGN--------------CVSLIRVNSANSSQSNMLI----- 645

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
           L + C+  D+ A    S +++AP+D +          PD   LLPSGF I P
Sbjct: 646 LQESCT--DQTA----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIFP 691



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 14/119 (11%)

Query: 11  QQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           + +E +SG     +    +Y R+T  Q++ +E  + ECP P   +R++L RE      +E
Sbjct: 71  ENQEGASGDDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLE 126

Query: 71  PKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           P Q+K WFQN+R + K   +R E ++L+  N KL A       +N R ++ +S   C N
Sbjct: 127 PLQVKFWFQNKRTQMKTQHERHENTQLRNENEKLRA-------DNMRYREALSNASCPN 178


>gi|15237948|ref|NP_197234.1| homeobox-leucine zipper protein HDG9 [Arabidopsis thaliana]
 gi|75309030|sp|Q9FFI0.1|HDG9_ARATH RecName: Full=Homeobox-leucine zipper protein HDG9; AltName:
           Full=HD-ZIP protein HDG9; AltName: Full=Homeodomain
           GLABRA 2-like protein 9; AltName: Full=Homeodomain
           transcription factor HDG9; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 9
 gi|10177077|dbj|BAB10519.1| homeobox protein [Arabidopsis thaliana]
 gi|332005030|gb|AED92413.1| homeobox-leucine zipper protein HDG9 [Arabidopsis thaliana]
          Length = 718

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 8/124 (6%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           M          +RE+   +   ++ +   Y R+T EQ+  LE  + ECP P   +R+ L 
Sbjct: 1   MDFTRDDNSSDERENDVDANTNNRHEKKGYHRHTNEQIHRLETYFKECPHPDEFQRRLLG 60

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
            E     N++PKQIK WFQN+R + K   E +     N  L A N  +  EN+ ++  ++
Sbjct: 61  EEL----NLKPKQIKFWFQNKRTQAKSHNEKAD----NAALRAENIKIRRENESMEDALN 112

Query: 121 QLVC 124
            +VC
Sbjct: 113 NVVC 116


>gi|22023157|gb|AAM88945.1|AF317882_1 transcription factor 1 [Oryza sativa]
          Length = 709

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 110/516 (21%), Positives = 198/516 (38%), Gaps = 95/516 (18%)

Query: 19  SINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 78
           S N ++    +  R T +Q E LE  +S C  P   +++ L       + +   Q+K WF
Sbjct: 59  SSNTNEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSET----TGLGLDQVKFWF 114

Query: 79  QNRRCREKQR--KEASRLQTVNRKLTAMNKLLMEENDR---------------------L 115
           QN+R + K    KE       N KL+  N++L +EN R                     L
Sbjct: 115 QNKRTQVKTMCWKEE------NYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQL 168

Query: 116 QKQVSQLVCENGYMKQQLRTAPATTDAS--CDSVVTTPQHSLRDANNPAGLLSIAEETLA 173
             ++ +L+ ++ +++Q++  +  T  A+     + ++  +     ++   +  +A+  + 
Sbjct: 169 AVEMERLMGQSEWLQQEIARSNGTPPAANLAFQLNSSADYVFSGQHDQQMIAELAKNAMH 228

Query: 174 EFLSKATGTAVDWVQMPGMK-------------PGPDSVGIFAISQSCSGVAARACGLVS 220
             +  A      W  +PG               PG +S             A RA  +V 
Sbjct: 229 ALIILAESHVALWFPVPGCSYEVLNKMAYDQAYPGDNSANAIGFKTE----ATRAVSMVM 284

Query: 221 LEPTKIAEILKD-------RPSWFRDCRSLEVFTMFPA--GNAGTIELLYTQAYAPTTLA 271
           ++   + + L D        P       +  ++T +P   G  G I+L+  +   P+ L 
Sbjct: 285 MDYKSVVDFLMDPYNYRTFFPEVISGAVTNRIYT-WPTSDGYNGVIQLMTVEMMFPSPLV 343

Query: 272 PARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGG 331
           PAR    LRY   L+ G +VV + SL            + F +   +PSG LI+      
Sbjct: 344 PARKCTFLRYCNVLNEGLVVVIDVSLD---------DGSIFSKCRKMPSGFLIQSIRPNS 394

Query: 332 SIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQR--MTIAETSGEV--VYGLGRQPAVLRT 387
             +  ++H+  +   V E+ +P        A+R   T+A  S  +  V+     P V   
Sbjct: 395 CKVTAIEHVLADDTGVHELYQPRVNGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTK 454

Query: 388 FSQRLSRGFNDAVNGF-------NDDGWSLMTCDGAE-DVIIAVNSTKSLSTASNPTNSL 439
             + L +  +D +  F           W+++   G E D+ +A   T   S++ N     
Sbjct: 455 GRKNLMKLADDLLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRRTTEGSSSYN----- 509

Query: 440 AFLGGILCAKASMLLQNVPPALLVRFLRE--HRSEW 473
                IL   AS+ L  +P       LR   HR +W
Sbjct: 510 ----AILSVTASLRLP-LPMRKTFDLLRNLTHRCKW 540


>gi|413939125|gb|AFW73676.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 735

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 22/112 (19%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q    +Y R+T  Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR 
Sbjct: 15  QRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWFQNRRT 70

Query: 84  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT 135
           + K + E              N  L  END+++       CEN  M++ LR 
Sbjct: 71  QMKAQHERQD-----------NCFLRAENDKIR-------CENIAMQEALRN 104



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 21/145 (14%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNAGTIELLYTQA 264
            +R  GLV +    + ++  D   W           R+++V      G + ++ L+Y + 
Sbjct: 297 GSRETGLVFMSAIGLVDMFMDSSKWTELFPAIVSKARTVDVLVNGMGGRSESLLLMYEEL 356

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS------GAGPNPASAAQFVRAEML 318
           +  + + P R+F  LRY   +++G   + + S+         GA P+        R+  L
Sbjct: 357 HVMSPVVPTREFCFLRYCRQIEHGLWAIADISVDQQQRDARFGAPPS--------RSCRL 408

Query: 319 PSGCLIRPCDGGGSIIHIVDHLNLE 343
           PSGCLI     G S +  V+H+ +E
Sbjct: 409 PSGCLIADMADGSSKVTWVEHMEIE 433


>gi|414883573|tpg|DAA59587.1| TPA: putative receptor-like kinase family protein, partial [Zea
           mays]
          Length = 52

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/36 (88%), Positives = 35/36 (97%)

Query: 156 RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           RDANNPAGLL+IAEETLAEF+SKATGTAV+WVQM G
Sbjct: 17  RDANNPAGLLAIAEETLAEFMSKATGTAVNWVQMVG 52


>gi|357485047|ref|XP_003612811.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
 gi|355514146|gb|AES95769.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
          Length = 801

 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 24/140 (17%)

Query: 11  QQRESSSGS---INKHQLDNGK--YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPI 65
           +Q E  SG+   IN  Q    K  Y R+TA Q++ +E ++ ECP P   +R +L  +   
Sbjct: 69  EQVEDKSGNEQEINNEQQATKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHDL-- 126

Query: 66  LSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
              ++P+Q+K WFQNRR + K +++ S     N  L A N+ L  EN RLQ  +  ++C 
Sbjct: 127 --GLKPRQVKFWFQNRRTQMKAQQDRSD----NVILRAENESLKNENYRLQSALRNILCP 180

Query: 126 N-----------GYMKQQLR 134
           N           G+   QLR
Sbjct: 181 NCGGPCIMGPDMGFDDHQLR 200


>gi|12002853|gb|AAG43405.1|AF172931_1 homeobox 1 [Picea abies]
          Length = 763

 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 113/496 (22%), Positives = 194/496 (39%), Gaps = 108/496 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW---FRDCRS----LEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + E L D   W   F    S    ++VF+   AGN  G +++++ +
Sbjct: 334 ASRETAVVIMNAINLVETLMDVNQWSSMFPGIVSRPFTVDVFSTGVAGNYNGALQVMHAE 393

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +    V + SL          +++  +R    PSGCL
Sbjct: 394 FQVPSPLVPTREIYFVRYCKQHSDSIWAVVDVSLDSLRG-----NSSSVIRCRRRPSGCL 448

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAE------------TS 371
           I+      S +  V+H+  +  +V  + R L  S      +  IA              S
Sbjct: 449 IQEMPNSYSKVTWVEHVEADDRAVHHIYRQLVNSGMAFGAKRWIATLQRQCERLASVLAS 508

Query: 372 GEVVYGLGRQPA-----VLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNST 426
                 LG  P+      +   ++R+   F   V+      W+ ++  GAEDV   V + 
Sbjct: 509 NIPARDLGVIPSPEGRKSILKLAERMVTSFCAGVSASTAHTWTTLSGSGAEDV--RVMTR 566

Query: 427 KSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSAA 484
           KS+     P        GI+ + A+ L   VPP  +  FLR+   R+EW     D  S  
Sbjct: 567 KSIDDPGRPP-------GIILSAATSLWLPVPPKKVFDFLRDENSRNEW-----DILSNG 614

Query: 485 SLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLL 544
            L                  Q +  + +  +    + ++R+   +  Q +  +     L 
Sbjct: 615 GL-----------------VQEVDHIANGQDPGNCVSLLRVNTVNSNQSNMLI-----LQ 652

Query: 545 QICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDTPD 595
           + C+    +A G  S +++AP+D +          PD   LLPSGF I+      PD+P 
Sbjct: 653 ESCT----DASG--SFVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAIL------PDSPK 700

Query: 596 TLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
            +                 TN    D  +     S+LT+AFQ   +S     ++  +   
Sbjct: 701 CMA---------------VTNSGINDLGTGG---SLLTVAFQILVDSVPTAKLSLGSVAT 742

Query: 656 VRSVIS-SVQRVAMAI 670
           V S+IS +V R+  A+
Sbjct: 743 VNSLISCTVDRIKAAV 758



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 29/164 (17%)

Query: 5   IQQQQQQQRESSSGSIN-----------KHQLDNGKYVRYTAEQVEALERVYSECPKPSS 53
           I + ++++ ES SGS N           + +    +Y R+T  Q++ +E  + ECP P  
Sbjct: 52  IAKIREEEFESKSGSDNVEGASGEDQDGERRPRKKRYHRHTQHQIQEMEMFFKECPHPDD 111

Query: 54  LRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEEND 113
            +R++L RE      +EP Q+K WFQN+R + K + E       N +L + N+ L  EN 
Sbjct: 112 KQRKELSREL----GLEPLQVKFWFQNKRTQMKTQHERHE----NTQLRSENEKLRSENM 163

Query: 114 RLQKQVSQLVCEN----------GYMKQQLRTAPATTDASCDSV 147
           R ++ ++   C N           + +QQLR   A      D +
Sbjct: 164 RYREALNNASCPNCGGPAALGEMSFDEQQLRMENARLREEIDRI 207


>gi|357147560|ref|XP_003574393.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Brachypodium
           distachyon]
          Length = 888

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 8/96 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 128 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 183

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
           ++    +  N  L A N+ L  +N RLQ  +  +VC
Sbjct: 184 QD----RADNVILRAENESLKTDNFRLQAALRNVVC 215


>gi|77378036|gb|ABA70759.1| baby boom interacting protein 1B [Brassica napus]
          Length = 711

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA+Q++ LE  + ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 33  RYHRHTAQQIQRLESSFKECPHPDDKQRNQLSREL----GLAPRQIKFWFQNRRTQLKAQ 88

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E    +  N  L A N  +  EN  +++ +   +C N
Sbjct: 89  HE----RADNNALKAENDKIRCENIAIREAIKHAICPN 122



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 14/140 (10%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAG-NAGTIELLYTQ 263
           A+R+ G+V +    + ++  D   W           ++L V +    G + G + L+Y +
Sbjct: 274 ASRSSGIVFMNAMTLVDMFMDGVKWGELFPCIVASSKTLAVVSSGMGGTHEGALHLMYEE 333

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L   R+F  LRY   ++ GS +V   S         P   +Q   +   PSGCL
Sbjct: 334 MAVLSPLVATREFCELRYCQMIEQGSWIVVNVSYHL------PQFVSQSSHSYKFPSGCL 387

Query: 324 IRPCDGGGSIIHIVDHLNLE 343
           I+    G S +  V+H+  E
Sbjct: 388 IQDMPSGYSKVTWVEHVETE 407


>gi|293331325|ref|NP_001169573.1| uncharacterized protein LOC100383453 [Zea mays]
 gi|224030161|gb|ACN34156.1| unknown [Zea mays]
          Length = 487

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 93/412 (22%), Positives = 158/412 (38%), Gaps = 89/412 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDR-------PSWFRDCRSLEVFTMFPAGNA-GTIELLYTQ 263
           A+R   +V +    + EIL D         S      +LEV +   AGN  G ++++  +
Sbjct: 54  ASRDSAVVIMTHANLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGNYNGALQVMSVE 113

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL G   G         ++    PSGCL
Sbjct: 114 FQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDGLRPG-------AVLKCRRRPSGCL 166

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  SV  + + L  S      R  +                
Sbjct: 167 IQEMPNGYSKVTWVEHVEVDDRSVHSIYKLLVSSGLAFGARRWVGTLDRQCERLASVMAS 226

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 227 NIPTSDIGVITSAEGRKS--MLKLAERMVMSFCGGVTASAAHQWTTLSGSGAEDV--RVM 282

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+   A+     VPP  +  FLR+   RSEW     D  S
Sbjct: 283 TRKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFDFLRDESSRSEW-----DILS 330

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              +                  Q +  + +  +H   + ++R+   +  Q    +     
Sbjct: 331 NGGVV-----------------QEMAHIANGRDHGNCVSLLRVNSTNSNQSSMLI----- 368

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
           L + C+ +      + S +++AP+D +          PD   LLPSGF I+P
Sbjct: 369 LQESCTDM------SGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 414


>gi|76782208|gb|ABA54874.1| baby boom interacting protein 1A [Brassica napus]
          Length = 718

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA+Q++ LE  + ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 39  RYHRHTAQQIQRLESSFKECPHPDDKQRNQLSREL----GLAPRQIKFWFQNRRTQLKAQ 94

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E +     N  L A N  +  EN  +++ +   +C N
Sbjct: 95  HERAD----NNALKAENDKIRCENIAIREAIKHAICPN 128



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 14/140 (10%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAG-NAGTIELLYTQ 263
           A+R+ G+V +    + ++  D   W           ++L V +    G + G + L+Y +
Sbjct: 281 ASRSSGIVFMNAMTLVDMFMDGVKWGELFPCIVASSKTLAVVSSGMGGTHEGALHLMYEE 340

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L   R+F  LRY   ++ GS +V   S         P   +Q   +   PSGCL
Sbjct: 341 MAVLSPLVATREFCELRYCQMIEQGSWIVVNVSYHL------PQFVSQSSHSYKFPSGCL 394

Query: 324 IRPCDGGGSIIHIVDHLNLE 343
           I+    G S +  V+H+  E
Sbjct: 395 IQDMPNGYSKVTWVEHVETE 414


>gi|357448571|ref|XP_003594561.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355483609|gb|AES64812.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 694

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 115/557 (20%), Positives = 208/557 (37%), Gaps = 120/557 (21%)

Query: 16  SSGSINKHQLDNGK---YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPK 72
           S   +N +  D+GK   + R T+ Q   L+    EC  P   +R QL     +   +EPK
Sbjct: 11  SGEEVNGNFRDDGKKPSHKRLTSAQTSILKNFMKECHHPDEAQRCQL----AVKIGLEPK 66

Query: 73  QIKVWFQNRRC---REKQRKEASRLQTVNRKLTAMNKLLMEE----------------ND 113
           QIK WFQN+R     + +R+    L+  N K+   N  + EE                 D
Sbjct: 67  QIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENLKIKEELKAKICLDCGGSPFPMKD 126

Query: 114 RLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSL---------RD---ANNP 161
             Q  V ++  EN  +KQ+     +   +  +  ++ P+            RD   +++ 
Sbjct: 127 H-QNFVQEMKQENAQLKQECEKVSSLLASYMEKKISRPEFEQALKSIKSFPRDYECSSHM 185

Query: 162 AGLLSIAEETLAEF-----------LSKATGTAVD------------WVQMPGMKPG--- 195
            G L +    L +            +S+    A+D            WV+    + G   
Sbjct: 186 QGNLVMWGGVLGQTSTQNYDAQKITMSQVVDAAMDELVRLVRVDEPFWVKPSNTQDGYTL 245

Query: 196 --PDSVGIFAISQSCSGV-----AARACGLVSLEPTKIAEILKDRPSW-------FRDCR 241
              +   +F  +    G      +++  GLV +   ++  +  D   W            
Sbjct: 246 HRENYEQVFPKNNHFKGAYVCEESSKYSGLVKISGIELVGMFLDLVKWTNLFPTIVTKAE 305

Query: 242 SLEVFTMFPAGNA-GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS 300
           +++VF +   G+  G + L+  + +  + L   R+F  +RY   +D G  V+ + S   S
Sbjct: 306 TIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKVDPGVWVITDVSFDSS 365

Query: 301 GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNL------------------ 342
                P S     R    PSGC+IR    GG ++  V+H+ +                  
Sbjct: 366 RPNTAPLS-----RGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYVYRDLVGEYN 420

Query: 343 ----EAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFND 398
               E+W + E+ R    S     + + + ET G +    GR   +    + R+ + F +
Sbjct: 421 LYGAESW-IKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRNSVI--KLADRMVKMFCE 477

Query: 399 AVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVP 458
            +        + +T D    V +++ +T     AS P        G +   A+ L   +P
Sbjct: 478 CLTMPGQVELNHLTLDSIGGVRVSIRATTD-DDASQPN-------GTVVTAATTLWLPLP 529

Query: 459 PALLVRFLRE--HRSEW 473
              +  FL++   RS+W
Sbjct: 530 AQKVFEFLKDPTKRSQW 546


>gi|224125934|ref|XP_002329753.1| predicted protein [Populus trichocarpa]
 gi|222870661|gb|EEF07792.1| predicted protein [Populus trichocarpa]
          Length = 725

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 55/207 (26%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 29  RYHRHTALQIQKLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 84

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA--------PATT 140
            E            A N  L  END+++       CEN  +++ L+          P T 
Sbjct: 85  HE-----------RADNSSLRAENDKIR-------CENIAIREALKNVICPSCGGPPVTE 126

Query: 141 DASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWV-----QMPGMKPG 195
           D+  D      +H LR  N            L E L + +  A  ++     Q+P ++P 
Sbjct: 127 DSYFD------EHKLRMEN----------VQLKEELDRVSSIAAKYIGRPISQLPPVQP- 169

Query: 196 PDSVGIFAISQSCSGVAARACGLVSLE 222
                I ++  S     A+  G  SL+
Sbjct: 170 ---FHISSLDLSMGNFGAQGIGGPSLD 193



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 209/508 (41%), Gaps = 105/508 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRD-------CRSLEVFTMFPAG-NAGTIELLYTQ 263
           A+R  G+V +    + ++  D   W           +++EV +    G ++G+++L+Y +
Sbjct: 276 ASRDSGVVIMNGVALVDMFMDSNKWVESFPTMVSVAKTIEVISSGMLGSHSGSLQLMYEE 335

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R+F  LRY   ++ G   +   S         P  A+QF R   LPSGCL
Sbjct: 336 LQVLSPLVPTREFCILRYCQQIEQGLWAIVSVSYD------IPQFASQF-RCHRLPSGCL 388

Query: 324 IRPCDGGGSIIHIVDHLNLE-AWSVPEVLRPLYESS------------KVVAQRMTIAET 370
           I+    G S +  V+H+ +E   +  ++ R L  S             + + +R+     
Sbjct: 389 IQDMPNGYSKVTWVEHVEIEDKTTTHQLYRDLIHSGMAFGAERWLATLQRMCERVACQMV 448

Query: 371 SGEVVYGLGR---QPAVLRT---FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
           SG     LG     P   R+    +QR+   F  +++  N   WS  T  G  DV + V 
Sbjct: 449 SGNSTRDLGGVIPSPEGKRSMMKLAQRMVSSFCSSISTSNSHRWS--TLSGLHDVGVRV- 505

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRS--EWADFNVDAYS 482
              +L  +++P        G++ + A+     V P  +  F ++ R+  +W   +    S
Sbjct: 506 ---TLHKSTDPGQP----NGVVLSAATTFSLPVSPQNVFSFFKDERTRPQWDVLS----S 554

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEV-IRLEG-HSLAQEDAF---- 536
             +++  ++   G  P            G+ I    +L V + L G  S    D F    
Sbjct: 555 GNAVQEVAHITNGSHP------------GNCI---SVLRVRLSLFGSFSTFYSDCFTAYN 599

Query: 537 VSRDIHLLQICSGVDENAVGACSELVFAPID------EMFPDDG---PLLPSGFRIIPLD 587
            S++  L+   S VD +     S +V+ P+D       M  +D    PLLPSGF I P D
Sbjct: 600 TSQNNMLILQESCVDSSG----SLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFAISP-D 654

Query: 588 SKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDN 647
            + PD  D                  A+  +    S+   + S++T+AFQ    S     
Sbjct: 655 GR-PDQGDG-----------------ASTSSNTQGSTARLSGSLITVAFQILVSSLPSAK 696

Query: 648 VATMARQYVRSVI-SSVQRVAMAI-CPS 673
           +   +   V ++I ++VQ++  A+ CPS
Sbjct: 697 LNLESVNTVNNLIGTTVQQIKAAMNCPS 724


>gi|242077254|ref|XP_002448563.1| hypothetical protein SORBIDRAFT_06g029270 [Sorghum bicolor]
 gi|241939746|gb|EES12891.1| hypothetical protein SORBIDRAFT_06g029270 [Sorghum bicolor]
          Length = 789

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           N+      +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN
Sbjct: 104 NQRPSKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQN 159

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           +R + K + E       N +L A N+ L  EN R ++ +S   C N
Sbjct: 160 KRTQMKNQHERHE----NSQLRAENEKLRAENMRYKEALSSASCPN 201



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 162/411 (39%), Gaps = 87/411 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   +            +LEV +   AGN  G ++++  +
Sbjct: 361 ASRDSSVVIMTHANLVEILMDVNQYATVFSSIVSRAVTLEVLSTGVAGNYNGALQVMSVE 420

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +GS  V + SL      PN       ++    PSGCL
Sbjct: 421 FQVPSPLVPTRESYFVRYCKQNADGSWAVVDVSLDS--LRPN-----SVLKCRRRPSGCL 473

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA------------------QRM 365
           I+    G S +  V+H+ ++  SV  + + L  S                          
Sbjct: 474 IQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGPPRWVGTLDPQCEPLPSVMPS 533

Query: 366 TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
           TI  +   V+     + ++L+  ++R+   F   V       W+ ++  GAEDV   V +
Sbjct: 534 TIPTSDMGVITSTEGRKSMLK-LAERMVMSFCGGVTASAAHQWTTLSGSGAEDV--RVMT 590

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS+     P        GI+   A+     VPP  +  FLR+   RSEW     D  S 
Sbjct: 591 RKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFDFLRDESSRSEW-----DILSN 638

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
             +                  Q +  + +  +H   + ++R+   +  Q +  +     L
Sbjct: 639 GGV-----------------VQEMAHIANGRDHGNCVSLLRVNSTNSNQSNMLI-----L 676

Query: 544 LQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
            + C+    +A G  S +++AP+D +          PD   LLPSGF I+P
Sbjct: 677 QESCT----DASG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 721


>gi|255566373|ref|XP_002524172.1| homeobox protein, putative [Ricinus communis]
 gi|223536541|gb|EEF38187.1| homeobox protein, putative [Ricinus communis]
          Length = 731

 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 111/498 (22%), Positives = 195/498 (39%), Gaps = 115/498 (23%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   LV +    + E L D   W            +LEV +   AGN  G ++++  +
Sbjct: 305 ASRETALVIMNHINLVEYLMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 364

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              PT L P R+ + +RY      G+  V + SL      P+PA+     R    PSGCL
Sbjct: 365 FQLPTPLVPTRESYFVRYCKQHAEGTWAVVDVSLDN--LRPSPAA-----RCRRRPSGCL 417

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  ++H+ ++   V  + + L  S      +  +A               
Sbjct: 418 IQEMPNGYSQVTWIEHVEVDDRGVHSLYKQLVSSGHAFGAKRWVATLDRQCERLASAMAT 477

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V+      W+ ++  GA+DV   V 
Sbjct: 478 NIPTGEVGVITNQEGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV--RVM 533

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+ + A+     VPP  +  FLR+   R++W     D  S
Sbjct: 534 TRKSVDDPGRPP-------GIVLSAATSFWLPVPPKRVFDFLRDENSRNQW-----DILS 581

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              +                  Q +  + +  +    + ++R+   + +Q +  +     
Sbjct: 582 NGGV-----------------VQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLI----- 619

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDT 593
           L + C+  D  A    S +++AP+D +          PD   LLPSGF I+         
Sbjct: 620 LQESCT--DPTA----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL--------- 664

Query: 594 PDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMAR 653
           PD  TAH          +G  +  A G         S+LT+AFQ   +S     ++  + 
Sbjct: 665 PDGTTAH-------GGGIGGESVSAGG---------SLLTVAFQILVDSVPTAKLSLGSV 708

Query: 654 QYVRSVIS-SVQRVAMAI 670
             V ++I+ +V+R+  A+
Sbjct: 709 ATVNNLIACTVERIKAAL 726



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 63  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 118

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E ++L+T N KL A       +N R ++ +S   C N
Sbjct: 119 HERHENTQLRTENEKLRA-------DNMRYREALSNASCPN 152


>gi|357139585|ref|XP_003571361.1| PREDICTED: homeobox-leucine zipper protein ROC7-like [Brachypodium
           distachyon]
          Length = 817

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 14/99 (14%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ LE  + ECP P   +R++L R    + N+EP Q+K WFQN+R + K  
Sbjct: 132 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSR----MLNLEPLQVKFWFQNKRTQIKTQ 187

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            +R+E + L+T N KL A       EN R ++ ++   C
Sbjct: 188 HERQENTALRTENEKLRA-------ENMRYKEALANASC 219



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 167/435 (38%), Gaps = 108/435 (24%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQ 263
           A+R  G+V ++   +  IL D   W            +LEV +   AGN  G ++L+  +
Sbjct: 374 ASRETGVVIMDQATLVSILMDVHQWSSVFSSIVSRAATLEVLSTGVAGNLDGALQLMSAE 433

Query: 264 AYAPTTLAPARDF-WTLRYTTTLDNG-----SLVVCERSLSGSGAGPNPASAAQFVRAEM 317
              P+ L P R+    LRY     +G     +  V + SL  SG   N    A       
Sbjct: 434 LQVPSPLVPTRELPLFLRYCKHHPHGAGGAGTWAVVDVSLDNSGRNSNIRRRA------- 486

Query: 318 LPSGCLIRPCDGGGSIIHIVDHLNLEAWS------VPEVLRPLYESSKVVAQR------- 364
             SGC+I+    G S +  ++H  L A +      V E+ +PL  S      R       
Sbjct: 487 --SGCVIQEMPNGYSKVTWIEHTELPAAASAADSMVHELYKPLVASGTAFGARRWVSTLK 544

Query: 365 ----------MTIAETSGE--VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMT 412
                     M++  +S +  V    GR+ ++LR  ++R++  F   V       W+ ++
Sbjct: 545 RQCERLASAAMSVHPSSADSVVTSAEGRR-SMLR-LAERMTASFCGGVAASATHQWTTLS 602

Query: 413 CDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--R 470
             G  DV   V + KS+     P        GI+   A+     V PA +  FLR+   R
Sbjct: 603 GSGEADV--RVMTRKSVDDPGRPP-------GIILNAATSFWLPVSPAEVFAFLRDDSTR 653

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTI---EHEELLEVIRLEG 527
           SEW D                          +   ++  + H      H   + ++R+  
Sbjct: 654 SEW-DI------------------------LSNGGVVHEMAHIANGQNHGNAVSLLRVNN 688

Query: 528 HSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLP 578
            +  Q +  + ++       S  DE   G  S +V+AP+D +          PD   LLP
Sbjct: 689 ANANQSNMLILQE-------SSTDEE--GGWSYVVYAPVDVVAMNVVLNGGDPDYVALLP 739

Query: 579 SGFRIIPLDSKTPDT 593
           SGF I+P D   PD+
Sbjct: 740 SGFAILP-DGTPPDS 753


>gi|51091201|dbj|BAD35894.1| putative homeobox [Oryza sativa Japonica Group]
          Length = 734

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 17/128 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K +
Sbjct: 18  RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENGYMKQQLRTAPAT 139
            E    +  N  L A N  +  EN  +++ +  ++C         E+ + +Q+LR   A 
Sbjct: 74  HE----RADNCFLRAENDKIRCENIAIREALKNVICPTCGGPPVGEDYFDEQKLRMENAR 129

Query: 140 TDASCDSV 147
                D V
Sbjct: 130 LKEELDRV 137



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 18/151 (11%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGNAGTIELLYTQA 264
            +R  GLV +    +A++  D   W            +++V      G + ++ L+Y + 
Sbjct: 268 GSRESGLVLMSAVALADVFMDTNKWMEFFPSIVSKAHTIDVLVNGMGGRSESLILMYEEL 327

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS----GSGAGPNPASAAQFVRAEMLPS 320
           +  T   P R+   +RY   ++ G   + + S+          P P       R+  LPS
Sbjct: 328 HIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGAPPP-------RSRRLPS 380

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL 351
           GCLI     G S +  V+H+ +E  S   VL
Sbjct: 381 GCLIADMANGYSKVTWVEHMEVEEKSPINVL 411


>gi|187611421|sp|Q69T58.2|ROC8_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC8; AltName:
           Full=GLABRA 2-like homeobox protein 8; AltName:
           Full=HD-ZIP protein ROC8; AltName: Full=Homeodomain
           transcription factor ROC8; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 8
          Length = 710

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 17/128 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K +
Sbjct: 18  RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENGYMKQQLRTAPAT 139
            E    +  N  L A N  +  EN  +++ +  ++C         E+ + +Q+LR   A 
Sbjct: 74  HE----RADNCFLRAENDKIRCENIAIREALKNVICPTCGGPPVGEDYFDEQKLRMENAR 129

Query: 140 TDASCDSV 147
                D V
Sbjct: 130 LKEELDRV 137



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 114/291 (39%), Gaps = 46/291 (15%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGNAGTIELLYTQA 264
            +R  GLV +    +A++  D   W            +++V      G + ++ L+Y + 
Sbjct: 268 GSRESGLVLMSAVALADVFMDTNKWMEFFPSIVSKAHTIDVLVNGMGGRSESLILMYEEL 327

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS----GSGAGPNPASAAQFVRAEMLPS 320
           +  T   P R+   +RY   ++ G   + + S+          P P       R+  LPS
Sbjct: 328 HIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGAPPP-------RSRRLPS 380

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL-RPLYESSKVVAQRMTIA-------ETSG 372
           GCLI     G S +  V+H+ +E  S   VL R L  S         +A         + 
Sbjct: 381 GCLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYAS 440

Query: 373 EVVYGL-----GRQPAVLRT---FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
            V  G+     G  P   R+    SQR+   F  ++       W+  T  G+ +V + V 
Sbjct: 441 LVALGVPHHIAGVTPEGKRSMMKLSQRMVNSFCSSLGASQMHQWT--TLSGSNEVSVRVT 498

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
             +S    ++P        G++ + A+ +   VP   +  F+R+   RS+W
Sbjct: 499 MHRS----TDPGQP----NGVVLSAATSIWLPVPCDHVFAFVRDENTRSQW 541


>gi|255555881|ref|XP_002518976.1| homeobox protein, putative [Ricinus communis]
 gi|223541963|gb|EEF43509.1| homeobox protein, putative [Ricinus communis]
          Length = 810

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 8/96 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ ECP P   +R +L ++      ++P+Q+K WFQNRR + K +
Sbjct: 89  RYHRHTARQIQEMESLFKECPHPDDKQRMKLSQDL----GLKPRQVKFWFQNRRTQMKAQ 144

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
           ++ +     N  L A N+ L  +N RLQ ++  L+C
Sbjct: 145 QDRAD----NIILRAENETLKSDNYRLQAELRNLIC 176



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 96/463 (20%), Positives = 180/463 (38%), Gaps = 67/463 (14%)

Query: 221 LEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLR 280
           L+  K  E+    PS     R++++ T   +G +G++ L++ +    + L P R+ + LR
Sbjct: 362 LDANKWMELF---PSIVAMARTVQILTSGVSGPSGSLHLMHAELQVLSPLVPTREAYFLR 418

Query: 281 Y-TTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDH 339
           Y    ++ G+  + +  +       +    A F      PSGC+I+    G S +  V+H
Sbjct: 419 YCQQNVEEGTWAIVDFPIDSF----HEDIQASFPLYRRRPSGCVIQDMPNGYSRVTWVEH 474

Query: 340 LNLEAWSVPEVLRPLYESSKV--------VAQRMT--IAETSGEVVYGLGRQPA-----V 384
              E   V ++      S           V QR    +A      +  LG  P+      
Sbjct: 475 AETEEKPVHQIFSHFVYSGMAFGAHRWLGVLQRQCERVASLMARNISDLGVIPSPEARKN 534

Query: 385 LRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGG 444
           L   +QR+ R F   ++  +   W+ ++ D ++D +    +T+ ++    P        G
Sbjct: 535 LMRLAQRMIRTFCMNISTCSGQSWTALS-DSSDDTVRI--TTRKITEPGQPN-------G 584

Query: 445 ILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYS-AASLKAGSYAYPGMRPTRFTG 503
           ++ +  S      P   +   LR+ R       +D  S   +L   ++   G  P     
Sbjct: 585 VILSAVSTTWLPYPHYQVFDILRDERRR---SQLDVLSNGNALHEVAHIANGSHPGNCIS 641

Query: 504 SQIIMPLGHTIEHEELL--EVIRLEGHSLAQEDAFVSRDIHLLQIC-SGVDENAVGACSE 560
              I    ++ +H EL+  E    +  SL     + + ++  +Q+  SG D + +     
Sbjct: 642 LLRINVASNSSQHVELMLQESCTDQSGSLI---VYTTVNVDSIQLAMSGEDPSCI----- 693

Query: 561 LVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAG 620
                         PLLP GF I+P++S T  + DT   +    + SS E G   N   G
Sbjct: 694 --------------PLLPLGFVIVPVESITSTSKDT-GGNEGNSIKSSEENG---NTGHG 735

Query: 621 DSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSV 663
            +S C  T  +  +A   P  + L  +       ++RS +  +
Sbjct: 736 CTSGCLLTIGLQVLASTIP-SAKLNLSTVNAINNHLRSTVHQI 777


>gi|356543720|ref|XP_003540308.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 732

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 96/428 (22%), Positives = 168/428 (39%), Gaps = 91/428 (21%)

Query: 196 PDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTM 248
           P  +G   +   C   A+R   +V +    + EIL D   W            +LEV + 
Sbjct: 294 PRGIGPKPVGFKCE--ASRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLST 351

Query: 249 FPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA 307
             AGN  G ++++  +   P+ L P R+ + +RY     +G+  V + SL      P+P+
Sbjct: 352 GVAGNYNGALQVMTAEVQVPSPLVPTRESYFVRYCKQHGDGTWAVVDVSLDN--LRPSPS 409

Query: 308 SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI 367
           +     R    PSGCLI+    G S +  V+H+ ++   V  + + L  S      +  I
Sbjct: 410 A-----RCRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWI 464

Query: 368 AETS-------------------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW 408
           A                      G +    GR+   +   ++R+   F   V+      W
Sbjct: 465 ANLDRQCERLASAMATNIPTVDVGVITNPDGRKS--MLKLAERMVISFCAGVSASTAHTW 522

Query: 409 SLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE 468
           + ++  GA+DV   V + KS+     P        GI+ + A+     V P  +  FLR+
Sbjct: 523 TTLSGTGADDV--RVMTRKSVDDPGRPP-------GIVLSAATSFWLPVSPKRVFEFLRD 573

Query: 469 H--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLE 526
              RSEW   +    +   ++  ++   G    R TG+               + ++R+ 
Sbjct: 574 ENSRSEWDILS----NGGVVQEMAHIANG----RDTGN--------------CVSLLRVN 611

Query: 527 GHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLL 577
             + +Q +  +     L + C      A    S +++AP+D +          PD   LL
Sbjct: 612 SANSSQSNMLI-----LQESC------ADSTGSFVIYAPVDIVAMNVVLNGGDPDYVALL 660

Query: 578 PSGFRIIP 585
           PSGF I+P
Sbjct: 661 PSGFAILP 668



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 62  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 117

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E ++L+T N KL A       +N R ++ +    C N
Sbjct: 118 HERHENTQLRTENEKLRA-------DNMRFREALGNASCPN 151


>gi|356529736|ref|XP_003533444.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Glycine max]
          Length = 807

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ ECP P   +R +L  E      ++P+Q+K WFQNRR + K +
Sbjct: 95  RYHRHTARQIQEMEALFKECPHPDDKQRLKLSHEL----GLKPRQVKFWFQNRRTQMKAQ 150

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           ++ +     N  L A N+ L  EN RLQ  +  ++C N
Sbjct: 151 QDRAD----NVILRAENESLKSENYRLQAALRNVICPN 184


>gi|115460702|ref|NP_001053951.1| Os04g0627000 [Oryza sativa Japonica Group]
 gi|122240821|sp|Q0J9X2.1|ROC2_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC2; AltName:
           Full=GLABRA 2-like homeobox protein 2; AltName:
           Full=HD-ZIP protein ROC2; AltName: Full=Homeodomain
           transcription factor ROC2; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 2
 gi|113565522|dbj|BAF15865.1| Os04g0627000 [Oryza sativa Japonica Group]
          Length = 784

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 162

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E S+L++ N KL A       EN R ++ +S   C N
Sbjct: 163 HERHENSQLRSDNEKLRA-------ENMRYKEALSSASCPN 196



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 116/291 (39%), Gaps = 47/291 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW---FRDCRS----LEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   +   F +  S    LEV +   AGN  G ++++  +
Sbjct: 355 ASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVE 414

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P        ++    PSGCL
Sbjct: 415 FQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP-------VLKCRRRPSGCL 467

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  SV  + + L  S      R  +                
Sbjct: 468 IQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMAS 527

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 528 NIPTSDIGVITSSEGRKS--MLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDV--RVM 583

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           + KS+     P        GI+   A+     VPP  +  FLR+   RSEW
Sbjct: 584 TRKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFDFLRDESSRSEW 627


>gi|357137911|ref|XP_003570542.1| PREDICTED: homeobox-leucine zipper protein ROC8-like [Brachypodium
           distachyon]
          Length = 713

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 64/143 (44%), Gaps = 35/143 (24%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           Q    +Y R+T  Q++ LE  + ECP P   +R  L RE      +EP+QIK WFQNRR 
Sbjct: 19  QRRKKRYHRHTPRQIQQLEATFKECPHPDENQRMHLSREL----GLEPRQIKFWFQNRRT 74

Query: 84  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT-------A 136
           + K + E            A N  L  END+++       CEN  M++ L+         
Sbjct: 75  QMKAQHE-----------RADNCFLRAENDKIR-------CENIAMREALKNVICPTCGG 116

Query: 137 PATTDASCDSVVTTPQHSLRDAN 159
           P T D   D      +H LR  N
Sbjct: 117 PHTNDDYFD------EHKLRMEN 133



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 68/178 (38%), Gaps = 22/178 (12%)

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------FRDCRS 242
           PG   GPD V +     SC         LV L    + +I  D   W           R+
Sbjct: 263 PGGSRGPD-VHVEGSRDSC---------LVLLPAHALVDIFMDSSKWADFFPTIVAKART 312

Query: 243 LEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS---- 298
           ++V     AG + ++ L+  + +  T + P R+   LRY   ++ G   V + S+     
Sbjct: 313 VDVLVSGMAGRSESLVLMQEELHVMTPVVPTRELCFLRYCRQIEQGLWAVADVSVDLLQQ 372

Query: 299 -GSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLY 355
               A      A    RA  LPSGCLI     G S +  V+H+          + PLY
Sbjct: 373 RDHAAASRYYGAPPQARARKLPSGCLIADMSNGYSKVTWVEHMETTEGDNKNPINPLY 430


>gi|31339097|dbj|BAC77155.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 783

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 106 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 161

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E S+L++ N KL A       EN R ++ +S   C N
Sbjct: 162 HERHENSQLRSDNEKLRA-------ENMRYKEALSSASCPN 195



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 116/291 (39%), Gaps = 47/291 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW---FRDCRS----LEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   +   F +  S    LEV +   AGN  G ++++  +
Sbjct: 354 ASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVE 413

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P        ++    PSGCL
Sbjct: 414 FQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP-------VLKCRRRPSGCL 466

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  SV  + + L  S      R  +                
Sbjct: 467 IQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMAS 526

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 527 NIPTSDIGVITSSEGRKS--MLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDV--RVM 582

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           + KS+     P       G +L A  S  L  VP   +  FLR+   RSEW
Sbjct: 583 TRKSVDDPGRPP------GIVLNAVTSFWLP-VPSKRVFHFLRDESSRSEW 626


>gi|218195634|gb|EEC78061.1| hypothetical protein OsI_17520 [Oryza sativa Indica Group]
          Length = 784

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 162

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E S+L++ N KL A       EN R ++ +S   C N
Sbjct: 163 HERHENSQLRSDNEKLRA-------ENMRYKEALSSASCPN 196



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 116/291 (39%), Gaps = 47/291 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW---FRDCRS----LEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   +   F +  S    LEV +   AGN  G ++++  +
Sbjct: 355 ASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAVTLEVLSTGVAGNYNGALQVMSVE 414

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P        ++    PSGCL
Sbjct: 415 FQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP-------VLKCRRRPSGCL 467

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  SV  + + L  S      R  +                
Sbjct: 468 IQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMAS 527

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 528 NIPTSDIGVITSSEGRKS--MLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDV--RVM 583

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           + KS+     P        GI+   A+     VPP  +  FLR+   RSEW
Sbjct: 584 TRKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFDFLRDESSRSEW 627


>gi|186478150|ref|NP_001117231.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189690|gb|AEE27811.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
          Length = 719

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 10/118 (8%)

Query: 11  QQRESSSGSINK--HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSN 68
           + +E  SG+     H     +Y R+T  Q++ +E  + ECP P   +R+QL RE     N
Sbjct: 47  ENQEGGSGNDQDPLHPNKKKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSREL----N 102

Query: 69  IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           +EP Q+K WFQN+R + K   E       N  L A N+ L  +N R ++ ++   C N
Sbjct: 103 LEPLQVKFWFQNKRTQMKNHHERHE----NSHLRAENEKLRNDNLRYREALANASCPN 156



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 118/291 (40%), Gaps = 47/291 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    I EIL D   W            +L V +   AGN  G ++++  +
Sbjct: 300 ASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQVMSAE 359

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ +  RY     +GS  V + SL      PNP +     R     SGCL
Sbjct: 360 FQVPSPLVPTRETYFARYCKQQGDGSWAVVDISL--DSLQPNPPA-----RCRRRASGCL 412

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV----------------VAQRMTI 367
           I+    G S +  V+H+ ++   V  + + +  +                   +A  M  
Sbjct: 413 IQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMAT 472

Query: 368 AETSGEV---VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
             +SGEV       GR+   +   ++R+   F   V+      W+ ++  GAEDV   V 
Sbjct: 473 NISSGEVGVITNQEGRRS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGAEDV--RVM 528

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           + KS+     P        GI+ + A+     VPP  +  FLR+   R+EW
Sbjct: 529 TRKSVDDPGRPP-------GIVLSAATSFWIPVPPKRVFDFLRDENSRNEW 572


>gi|357159535|ref|XP_003578477.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 3
           [Brachypodium distachyon]
          Length = 858

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 8/86 (9%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 87
           +Y R+T +Q++ LE V+ ECP P   +R +L R      N+E +Q+K WFQNRR + KQ 
Sbjct: 122 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKQT 177

Query: 88  ---RKEASRLQTVNRKLTAMNKLLME 110
              R E + L+  N KL A N  + E
Sbjct: 178 QIERHENALLRQENDKLRAENMTIRE 203



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 11/176 (6%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWF--------RDCRSLEVFTMFPAGNAGTIELLYTQ 263
           A R  GL  +   ++ + L D   W         R   +  +    P   +G+I+L++ +
Sbjct: 381 ATREVGLAIVSSAELVDSLMDAARWAEMFPCVVARASTTDIISGGMPGTRSGSIQLMHAE 440

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG---SGAGPNPASAAQFVRAEMLPS 320
               + L P R+   LR+      G   V + S  G      G    +AA ++   +LPS
Sbjct: 441 LQVLSPLVPIREVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAAAGYMGCRLLPS 500

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVY 376
           GC++     G + +  V H   +  +V  + RPL  S + +  R  +A    +  Y
Sbjct: 501 GCVVEDMRNGYAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLASLQRQCQY 556


>gi|357471231|ref|XP_003605900.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355506955|gb|AES88097.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 734

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 63  RYHRHTQHQIQEMESFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 118

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E S     N +L A N+ L  +N R ++ +S   C N
Sbjct: 119 HERSE----NSQLRADNEKLRADNMRYREALSNASCPN 152



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 118/291 (40%), Gaps = 47/291 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            ++EV +   AGN  G ++++  +
Sbjct: 304 ASRESSVVIMNHVNLVEILMDVNQWSTVFAGIVSRAVTVEVLSTGVAGNYNGALQVMTAE 363

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P+P+S     R    PSGCL
Sbjct: 364 FQVPSPLVPTRESYFVRYCKQHPDGTWAVVDVSLDN--LRPSPSS-----RCRRRPSGCL 416

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++   V  + + L  +      +  +A               
Sbjct: 417 IQEMPNGYSKVTWVEHVEVDERGVHNLYKQLVNTGDAFGAKRWVATLDRQCERLASSMAT 476

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V+      W+ ++  GA+DV   V 
Sbjct: 477 NIPTVDVGVITNQEGRKS--MLKLAERMVISFCGGVSASTAHTWTTLSGTGADDV--RVM 532

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           + KS+     P        GI+ + A+     VPP  +  FLR    R+EW
Sbjct: 533 TRKSVDDPGRPP-------GIVLSAATSFWLPVPPTQVFEFLRNENSRTEW 576


>gi|15220448|ref|NP_172015.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|30679181|ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|334182300|ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|75332091|sp|Q94C37.1|HDG2_ARATH RecName: Full=Homeobox-leucine zipper protein HDG2; AltName:
           Full=HD-ZIP protein HDG2; AltName: Full=Homeodomain
           GLABRA 2-like protein 2; AltName: Full=Homeodomain
           transcription factor HDG2; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 2
 gi|14334996|gb|AAK59762.1| At1g05230/YUP8H12_16 [Arabidopsis thaliana]
 gi|20147145|gb|AAM10289.1| At1g05230/YUP8H12_16 [Arabidopsis thaliana]
 gi|222423025|dbj|BAH19495.1| AT1G05230 [Arabidopsis thaliana]
 gi|332189688|gb|AEE27809.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189689|gb|AEE27810.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189691|gb|AEE27812.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
          Length = 721

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 10/118 (8%)

Query: 11  QQRESSSGSINK--HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSN 68
           + +E  SG+     H     +Y R+T  Q++ +E  + ECP P   +R+QL RE     N
Sbjct: 47  ENQEGGSGNDQDPLHPNKKKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSREL----N 102

Query: 69  IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           +EP Q+K WFQN+R + K   E       N  L A N+ L  +N R ++ ++   C N
Sbjct: 103 LEPLQVKFWFQNKRTQMKNHHERHE----NSHLRAENEKLRNDNLRYREALANASCPN 156



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 160/415 (38%), Gaps = 95/415 (22%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    I EIL D   W            +L V +   AGN  G ++++  +
Sbjct: 300 ASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQVMSAE 359

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ +  RY     +GS  V + SL      PNP +     R     SGCL
Sbjct: 360 FQVPSPLVPTRETYFARYCKQQGDGSWAVVDISL--DSLQPNPPA-----RCRRRASGCL 412

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV----------------VAQRMTI 367
           I+    G S +  V+H+ ++   V  + + +  +                   +A  M  
Sbjct: 413 IQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMAT 472

Query: 368 AETSGEV---VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
             +SGEV       GR+   +   ++R+   F   V+      W+ ++  GAEDV   V 
Sbjct: 473 NISSGEVGVITNQEGRRS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGAEDV--RVM 528

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+ + A+     VPP  +  FLR+   R+EW         
Sbjct: 529 TRKSVDDPGRPP-------GIVLSAATSFWIPVPPKRVFDFLRDENSRNEW--------- 572

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEEL---LEVIRLEGHSLAQEDAFVSR 539
                              +   ++  + H     +    + ++R+   + +Q +  +  
Sbjct: 573 ----------------DILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLI-- 614

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
              L + C+  D  A    S +++AP+D +          PD   LLPSGF I+P
Sbjct: 615 ---LQESCT--DPTA----SFVIYAPVDIVAMNIVLNGGDPDYVALLPSGFAILP 660


>gi|218197780|gb|EEC80207.1| hypothetical protein OsI_22100 [Oryza sativa Indica Group]
          Length = 613

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 17/128 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K +
Sbjct: 18  RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENGYMKQQLRTAPAT 139
            E    +  N  L A N  +  EN  +++ +  ++C         E+ + +Q+LR   A 
Sbjct: 74  HE----RADNCFLRAENDKIRCENIAIREALKNVICPTCGGPPVGEDYFDEQKLRMENAR 129

Query: 140 TDASCDSV 147
                D V
Sbjct: 130 LKEELDRV 137



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 114/291 (39%), Gaps = 46/291 (15%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGNAGTIELLYTQA 264
            +R  GLV +    +A++  D   W            +++V      G + ++ L+Y + 
Sbjct: 268 GSRESGLVLMSAVALADVFMDTNKWMEFFPSIVSKAHTIDVLVNGMGGRSESLILMYEEL 327

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS----GSGAGPNPASAAQFVRAEMLPS 320
           +  T   P R+   +RY   ++ G   + + S+          P P       R+  LPS
Sbjct: 328 HIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGAPPP-------RSRRLPS 380

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL-RPLYESSKVVAQRMTIA-------ETSG 372
           GCLI     G S +  V+H+ +E  S   VL R L  S         +A         + 
Sbjct: 381 GCLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYAS 440

Query: 373 EVVYGL-----GRQPAVLRT---FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
            V  G+     G  P   R+    SQR+   F  ++       W+  T  G+ +V + V 
Sbjct: 441 LVALGVPHHIAGVTPEGKRSMMKLSQRMVNSFCSSLGASQMHQWT--TLSGSNEVSVRVT 498

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
             +S    ++P        G++ + A+ +   VP   +  F+R+   RS+W
Sbjct: 499 MHRS----TDPGQP----NGVVLSAATSIWLPVPCDHVFAFVRDENTRSQW 541


>gi|357166100|ref|XP_003580598.1| PREDICTED: homeobox-leucine zipper protein ROC2-like [Brachypodium
           distachyon]
          Length = 787

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 91/412 (22%), Positives = 159/412 (38%), Gaps = 92/412 (22%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAG-NAGTIELLYTQ 263
           A+R   +V L P  + EIL D   +            +LEV +   AG   G ++++  +
Sbjct: 357 ASRESAVVILTPANLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGCYDGALQVMSVE 416

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL             Q ++    PSGCL
Sbjct: 417 FQVPSPLVPTRESYFVRYCKQNSDGTWAVVDVSLD----------TLQGIKCRRRPSGCL 466

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  SV  + + L  S      R  +                
Sbjct: 467 IQEAPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGALGRQCERLASVMAS 526

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    G++   +   ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 527 NIPNSDIGVITSSEGKKS--MLKLAERMVASFCGGVTASVAHQWTRLSGSGAEDV--RVM 582

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + +S+     P        GI+   A+     VPP  +  FLR+   RS+W     D  S
Sbjct: 583 TRQSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFDFLRDETSRSQW-----DILS 630

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              +                  Q +  + +  +H   + ++R+   +  Q +  +     
Sbjct: 631 NGGV-----------------VQEMAHIANGRDHGNCVSLLRVNSTNSNQSNMLI----- 668

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
           L + C+    +A G  S +++AP+D +          PD   LLPSGF I+P
Sbjct: 669 LQESCT----DASG--SYVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 714



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 13/120 (10%)

Query: 5   IQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           ++ + QQQ +      NK      +Y R+T  Q++ +E  Y EC  P   +R++L RE  
Sbjct: 96  VEDELQQQADP-----NKRPRKQNRYHRHTQHQIQEMEAFYKECQHPDDKQRKELSREL- 149

Query: 65  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
               +EP Q+K WFQN+R + K ++E       N +L   N  L  EN R ++ +S   C
Sbjct: 150 ---GLEPLQVKFWFQNKRTQTKNQQERHE----NSQLRGENDKLRAENMRYKEALSSASC 202


>gi|15219456|ref|NP_177479.1| homeobox-leucine zipper protein HDG11 [Arabidopsis thaliana]
 gi|75263138|sp|Q9FX31.1|HDG11_ARATH RecName: Full=Homeobox-leucine zipper protein HDG11; AltName:
           Full=HD-ZIP protein HDG11; AltName: Full=Homeodomain
           GLABRA 2-like protein 11; AltName: Full=Homeodomain
           transcription factor HDG11; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 11
 gi|11120798|gb|AAG30978.1|AC012396_14 homeobox protein, putative [Arabidopsis thaliana]
 gi|28393178|gb|AAO42020.1| putative homeobox protein [Arabidopsis thaliana]
 gi|28827208|gb|AAO50448.1| putative homeobox protein [Arabidopsis thaliana]
 gi|332197328|gb|AEE35449.1| homeobox-leucine zipper protein HDG11 [Arabidopsis thaliana]
          Length = 722

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 22/108 (20%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA+Q++ LE  + ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 35  RYHRHTAQQIQRLESSFKECPHPDEKQRNQLSREL----GLAPRQIKFWFQNRRTQLKAQ 90

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA 136
            E            A N  L  END+++       CEN  +++ L+ A
Sbjct: 91  HE-----------RADNSALKAENDKIR-------CENIAIREALKHA 120



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 118/294 (40%), Gaps = 55/294 (18%)

Query: 212 AARACGLVSLEPTKIAEILKD-------RPSWFRDCRSLEVFTMFPAG-NAGTIELLYTQ 263
           A+R+ G+V +    + ++  D        PS     ++L V +    G + G + LLY +
Sbjct: 291 ASRSSGIVFMNAMALVDMFMDCVKWTELFPSIIAASKTLAVISSGMGGTHEGALHLLYEE 350

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L   R+F  LRY    + GS +V   S       P   S +Q  R    PSGCL
Sbjct: 351 MEVLSPLVATREFCELRYCQQTEQGSWIVVNVSYD----LPQFVSHSQSYR---FPSGCL 403

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPA 383
           I+    G S +  V+H+  E     E++  LY   + +  R         + +G  R   
Sbjct: 404 IQDMPNGYSKVTWVEHIETEE---KELVHELY---REIIHR--------GIAFGADRWVT 449

Query: 384 VLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI-----------IAVN-STKSLST 431
            L+   +R +   +   +   D G  +++ +G   ++           ++V+ S  + ST
Sbjct: 450 TLQRMCERFA-SLSVPASSSRDLGGVILSPEGKRSMMRLAQRMISNYCLSVSRSNNTRST 508

Query: 432 ASNPTNSLAFL----------GGILCAKASMLLQNVPPALLVRFLREHRS--EW 473
             +  N +             G +LCA  +  L N P  +   FL++ R+  +W
Sbjct: 509 VVSELNEVGIRVTAHKSPEPNGTVLCAATTFWLPNSPQNVF-NFLKDERTRPQW 561


>gi|222635166|gb|EEE65298.1| hypothetical protein OsJ_20535 [Oryza sativa Japonica Group]
          Length = 575

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 17/128 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K +
Sbjct: 18  RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENGYMKQQLRTAPAT 139
            E    +  N  L A N  +  EN  +++ +  ++C         E+ + +Q+LR   A 
Sbjct: 74  HE----RADNCFLRAENDKIRCENIAIREALKNVICPTCGGPPVGEDYFDEQKLRMENAR 129

Query: 140 TDASCDSV 147
                D V
Sbjct: 130 LKEELDRV 137



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 114/291 (39%), Gaps = 46/291 (15%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGNAGTIELLYTQA 264
            +R  GLV +    +A++  D   W            +++V      G + ++ L+Y + 
Sbjct: 268 GSRESGLVLMSAVALADVFMDTNKWMEFFPSIVSKAHTIDVLVNGMGGRSESLILMYEEL 327

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS----GSGAGPNPASAAQFVRAEMLPS 320
           +  T   P R+   +RY   ++ G   + + S+          P P       R+  LPS
Sbjct: 328 HIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGAPPP-------RSRRLPS 380

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL-RPLYESSKVVAQRMTIA-------ETSG 372
           GCLI     G S +  V+H+ +E  S   VL R L  S         +A         + 
Sbjct: 381 GCLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYAS 440

Query: 373 EVVYGL-----GRQPAVLRT---FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
            V  G+     G  P   R+    SQR+   F  ++       W+  T  G+ +V + V 
Sbjct: 441 LVALGVPHHIAGVTPEGKRSMMKLSQRMVNSFCSSLGASQMHQWT--TLSGSNEVSVRVT 498

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
             +S    ++P        G++ + A+ +   VP   +  F+R+   RS+W
Sbjct: 499 MHRS----TDPGQP----NGVVLSAATSIWLPVPCDHVFAFVRDENTRSQW 541


>gi|116312004|emb|CAJ86361.1| OSIGBa0117N13.5 [Oryza sativa Indica Group]
          Length = 781

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 104 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 159

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E S+L++ N KL A       EN R ++ +S   C N
Sbjct: 160 HERHENSQLRSDNEKLRA-------ENMRYKEALSSASCPN 193



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 116/291 (39%), Gaps = 47/291 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW---FRDCRS----LEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   +   F +  S    LEV +   AGN  G ++++  +
Sbjct: 352 ASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAVTLEVLSTGVAGNYNGALQVMSVE 411

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P        ++    PSGCL
Sbjct: 412 FQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP-------VLKCRRRPSGCL 464

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  SV  + + L  S      R  +                
Sbjct: 465 IQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMAS 524

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 525 NIPTSDIGVITSSEGRKS--MLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDV--RVM 580

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           + KS+     P        GI+   A+     VPP  +  FLR+   RSEW
Sbjct: 581 TRKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFDFLRDESSRSEW 624


>gi|39545845|emb|CAE04753.3| OSJNBb0060E08.16 [Oryza sativa Japonica Group]
          Length = 781

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 104 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 159

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E S+L++ N KL A       EN R ++ +S   C N
Sbjct: 160 HERHENSQLRSDNEKLRA-------ENMRYKEALSSASCPN 193



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 116/291 (39%), Gaps = 47/291 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW---FRDCRS----LEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   +   F +  S    LEV +   AGN  G ++++  +
Sbjct: 352 ASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVE 411

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P        ++    PSGCL
Sbjct: 412 FQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP-------VLKCRRRPSGCL 464

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  SV  + + L  S      R  +                
Sbjct: 465 IQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMAS 524

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 525 NIPTSDIGVITSSEGRKS--MLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDV--RVM 580

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           + KS+     P        GI+   A+     VPP  +  FLR+   RSEW
Sbjct: 581 TRKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFDFLRDESSRSEW 624


>gi|356568318|ref|XP_003552359.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 822

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 32/140 (22%)

Query: 5   IQQQQQQQRESSSGSINKHQLDNG---------------KYVRYTAEQVEALERVYSECP 49
           +++ ++++ ES SGS N   +D G               +Y R+T +Q++ LE ++ ECP
Sbjct: 91  LRRSREEEHESRSGSDN---MDGGSGDDFDAADNPPRKKRYHRHTPQQIQELESLFKECP 147

Query: 50  KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNK 106
            P   +R +L R      N+E +Q+K WFQNRR + K   +R E S L+  N KL A   
Sbjct: 148 HPDEKQRLELSRRL----NLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRA--- 200

Query: 107 LLMEENDRLQKQVSQLVCEN 126
               EN  +++ +   +C N
Sbjct: 201 ----ENMSMREAMRNPICSN 216



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 111/291 (38%), Gaps = 43/291 (14%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R  G+V +    + E L D   W            + EV +    G   G ++L++ +
Sbjct: 394 ASRQTGMVIINSLALVETLMDSNRWSEMFPCMIARTSTAEVISNGINGTRNGALQLMHAE 453

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R+   LR+      G   V + S+         + A  FV    LPSGC+
Sbjct: 454 LQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSID---TIRETSGAPTFVNCRRLPSGCV 510

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS----------------KVVAQRMTI 367
           ++    G S +  V+H   +   + ++ RPL  S                 + +A  M+ 
Sbjct: 511 VQDMPNGYSKVTWVEHAEYDESQIHQLFRPLLSSGMGFGAQRWVTTLQRQCECLAILMSS 570

Query: 368 AETSGE--VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDG-AEDVIIAVN 424
           A  S E   +   GR+  +    + R++  F   V       W+ +      EDV   V 
Sbjct: 571 AAPSREHSAISSGGRRSML--KLAHRMTNNFCSGVCASTVHKWNKLNAGNVGEDV--RVM 626

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           + KS+     P        GI+ + A+ +   V    L  FLR+   RSEW
Sbjct: 627 TRKSVDDPGEPP-------GIVLSAATSVWLPVSSQRLFDFLRDERLRSEW 670


>gi|4325343|gb|AAD17342.1| contains similarity to homeobox domains (Pfam: PF00046, Score,36.5,
           E=6.9e-08, N=1) [Arabidopsis thaliana]
          Length = 772

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 116/519 (22%), Positives = 200/519 (38%), Gaps = 122/519 (23%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++  +
Sbjct: 317 ASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVMTAE 376

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +GS  V + SL       +   +   +R    PSGCL
Sbjct: 377 FQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLD------SLRPSTPILRTRRRPSGCL 430

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAE-------------- 369
           I+    G S +  ++H+ ++  SV  + +PL +S      +  +A               
Sbjct: 431 IQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMAS 490

Query: 370 ----------TSGEVVY-GLGRQPAVLRT----------FSQRLSRGFNDAVNGFNDDGW 408
                      S +  Y G      V+ T           ++R+   F   V       W
Sbjct: 491 NIPGDLSGRGYSDQFKYVGAKLNENVMITSPEGRKSMLKLAERMVMSFCSGVGASTAHAW 550

Query: 409 SLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE 468
           + M+  G++DV   V + KS+     P        GI+ + A+     V P  +  FLR+
Sbjct: 551 TTMSTTGSDDV--RVMTRKSMDDPGRPP-------GIVLSAATSFWIPVAPKRVFDFLRD 601

Query: 469 H--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLE 526
              R EW     D  S   +                  Q +  + +  E    + ++R+ 
Sbjct: 602 ENSRKEW-----DILSNGGM-----------------VQEMAHIANGHEPGNCVSLLRVN 639

Query: 527 GHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLL 577
             + +Q +  +     L + C+    +A G  S +++AP+D +          PD   LL
Sbjct: 640 SGNSSQSNMLI-----LQESCT----DASG--SYVIYAPVDIVAMNVVLSGGDPDYVALL 688

Query: 578 PSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQ 637
           PSGF I+P  S      +    H+ +  T+S             S SC    S+LT+AFQ
Sbjct: 689 PSGFAILPDGSVGGGDGNQ---HQEMVSTTS-------------SGSCGG--SLLTVAFQ 730

Query: 638 FPFESNLQDNVATMARQYVRSVIS-SVQRVAMAI-CPSG 674
              +S     ++  +   V S+I  +V+R+  A+ C  G
Sbjct: 731 ILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVSCDVG 769



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 23/113 (20%)

Query: 29  KYVRYTAEQVEALE---------------RVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           +Y R+T  Q++ LE               R + ECP P   +R++L R+     N+EP Q
Sbjct: 60  RYHRHTQRQIQELESLKTFSYILSFLEFYRFFKECPHPDDKQRKELSRDL----NLEPLQ 115

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           +K WFQN+R + K + E       N+ L + N  L  EN+R ++ +S   C N
Sbjct: 116 VKFWFQNKRTQMKAQSERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 164


>gi|356532068|ref|XP_003534596.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 820

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 25/124 (20%)

Query: 5   IQQQQQQQRESSSGSINKHQLDNG---------------KYVRYTAEQVEALERVYSECP 49
           +++ ++++ ES SGS N   +D G               +Y R+T +Q++ LE ++ ECP
Sbjct: 85  LRRNREEEHESRSGSDN---MDGGSGDDFDAADNPPRKKRYHRHTPQQIQELESLFKECP 141

Query: 50  KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNK 106
            P   +R +L R      N+E +Q+K WFQNRR + K   +R E S L+  N KL A N 
Sbjct: 142 HPDEKQRLELSRRL----NLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 197

Query: 107 LLME 110
            + E
Sbjct: 198 SMRE 201



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 55/297 (18%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R  G+V +    + E L D   W            + EV +    G   G ++L++ +
Sbjct: 391 ASRQTGMVIINSLALVETLMDSNRWSEMFPCMIARTSTAEVISNGINGTRNGALQLMHAE 450

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R+   LR+      G   V + S+       + + A  FV    LPSGC+
Sbjct: 451 LQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSID---TIRDTSGAPTFVNCRRLPSGCV 507

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYES------------------------SK 359
           ++    G S +  V+H   +   + ++ RPL  S                        S 
Sbjct: 508 VQDMPNGYSKVTWVEHAEYDESQIHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILISS 567

Query: 360 VVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDG-AED 418
            V  R   A +SG      GR+  +    +QR++  F   V       W+ +      ED
Sbjct: 568 AVPSREHSAISSG------GRRSML--KLAQRMTNNFCAGVCASTVHKWNKLNAGNVGED 619

Query: 419 VIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           V   V + KS+     P        GI+ + A+ +   V P  L  FLR+   RSEW
Sbjct: 620 V--RVMTRKSVDDPGEPP-------GIVLSAATSVWLPVSPQRLFDFLRDERLRSEW 667


>gi|125527992|gb|EAY76106.1| hypothetical protein OsI_04032 [Oryza sativa Indica Group]
          Length = 736

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/391 (20%), Positives = 149/391 (38%), Gaps = 88/391 (22%)

Query: 19  SINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 78
           S N ++    +  R T +Q E LE  +S C  P   +++ L       + +   Q+K WF
Sbjct: 59  SSNTNEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSET----TGLGLDQVKFWF 114

Query: 79  QNRRCREKQR--KEASRLQTVNRKLTAMNKLLMEENDR---------------------L 115
           QN+R + K    KE       N KL+  N++L +EN R                     L
Sbjct: 115 QNKRTQVKTMCWKEE------NYKLSVENEILRDENRRVKIAHCTAICLTCRNSSVQNQL 168

Query: 116 QKQVSQLVCENGYMKQQLRTAPATTDAS--CDSVVTTPQHSLRDANNPAGLLSIAEETLA 173
             ++ +L+ ++ +++Q++  +  T  A+     + ++  +     ++   +  +A+  + 
Sbjct: 169 AVEMERLMGQSEWLQQEIARSNGTPPAANLAFQLNSSADYVFSGQHDQQMIAELAKNAMH 228

Query: 174 EFLSKATGTAVDWVQMPG--------------MKPGPDSVGIFAISQSCSGVAARACGLV 219
             +  A      W  +PG                PG +S             A RA  +V
Sbjct: 229 ALIILAESHVALWFPVPGCAYEVLNKMMAYDQAYPGDNSANAIGFKTE----ATRAVSMV 284

Query: 220 SLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA-----------------GNAGTIELLYT 262
            ++   + + L D P  +R        T FP                  G  G I+L+  
Sbjct: 285 MMDYKSVVDFLMD-PYNYR--------TFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTV 335

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGC 322
           +   P+ L PAR    LRY   L+ G +VV + SL            + F +   +PSG 
Sbjct: 336 EMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDVSLD---------DGSIFSKCRKMPSGF 386

Query: 323 LIRPCDGGGSIIHIVDHLNLEAWSVPEVLRP 353
           LI+        +  ++H+  +   V E+ +P
Sbjct: 387 LIQSIRPNSCKVTAIEHVLADDTGVHELYQP 417


>gi|356561849|ref|XP_003549189.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 718

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 39/199 (19%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 27  RYHRHTANQIQRLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 82

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
            E            A N  L  END+++       CEN  +++ L+      +  C S  
Sbjct: 83  HE-----------RADNCALRAENDKIR-------CENIAIREALK------NVICPSCG 118

Query: 149 TTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWV-----QMPGMKPGPDSVGIFA 203
             P +   D       L +    L E L + +  A  ++     Q+P ++P    + I +
Sbjct: 119 GPPMND--DCYFDEQKLRLENAQLKEELDRVSSIAAKYIGRPISQLPPVQP----IHISS 172

Query: 204 ISQSCSGVAARACGLVSLE 222
           +  S    A++  G  SL+
Sbjct: 173 LDLSMGTFASQGLGGPSLD 191



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 62/291 (21%), Positives = 120/291 (41%), Gaps = 41/291 (14%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGNAGT-IELLYTQ 263
           A+R  G+V +    + ++  D   W           R++EV +    G  G  ++L+Y +
Sbjct: 279 ASRDSGVVIMNGLTLVDMFMDPNKWMELFSTIVTMARTIEVISSGMMGGHGGSLQLMYEE 338

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L   R+F+ LRY   ++ G   + + S   +    +   A QF R+  LPSG  
Sbjct: 339 LQVLSPLVSTREFYFLRYCQQIEQGLWAIVDVSYDFTQ---DNQFAPQF-RSHRLPSGVF 394

Query: 324 IRPCDGGGSIIHIVDHLNLEAWS-VPEVLRP-LYESSKVVAQR--------------MTI 367
           I+    G S +  ++H+ +E  + V  + R  +Y      AQR              + +
Sbjct: 395 IQDMPNGYSKVTWIEHVEIEDKTPVHRLYRNIIYSGIAFGAQRWLTTLQRMCERIACLLV 454

Query: 368 AETSGEVVYGLGRQPAVLRT---FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
              S   + G+   P   R+    +QR+   F  +++      W+ ++  G  +V + V 
Sbjct: 455 TGNSTRDLGGVIPSPEGKRSMMKLAQRMVTNFCASISSSAGHRWTTLSGSGMNEVGVRVT 514

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
             KS    S+P        G++ + A+ +   +PP  +  F ++   R +W
Sbjct: 515 VHKS----SDPGQP----NGVVLSAATTIWLPIPPQTVFNFFKDEKKRPQW 557


>gi|224128938|ref|XP_002320458.1| predicted protein [Populus trichocarpa]
 gi|222861231|gb|EEE98773.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 14/119 (11%)

Query: 11  QQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           + ++ +SG     +    +Y R+T  Q++ +E  + ECP P   +R++L RE      +E
Sbjct: 43  ENQDGASGDDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLE 98

Query: 71  PKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           P Q+K WFQN+R + K   +R E ++L+  N KL A       +N R ++ +S   C N
Sbjct: 99  PLQVKFWFQNKRTQMKTQHERHENTQLRNENEKLRA-------DNMRYREALSNASCPN 150



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 179/469 (38%), Gaps = 117/469 (24%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + E L D   W            +LEV +   AGN  G ++++  +
Sbjct: 303 ASRESAVVIMNHINLVEYLMDVNQWSTLFSGIVSRALTLEVLSTGVAGNYNGALQVMTAE 362

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              PT L P R+ + +RY     +G+  V + SL      P+P +     R    PSGCL
Sbjct: 363 FQLPTPLVPTRESYFVRYCKQHADGTWAVVDVSL--DNLRPSPGA-----RCRRRPSGCL 415

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++   V  + + L  S      +  +A               
Sbjct: 416 IQEMLNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMAT 475

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V+      W+ ++  GA+DV   V 
Sbjct: 476 NIPAGDVGVITNQEGRKS--MMKLAERMVISFCAGVSASTAHTWTTLSGTGADDV--RVM 531

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+ + A+     VPP  +  FLR+   R+EW     D  S
Sbjct: 532 TRKSVDDPGRPP-------GIVLSAATSFWLPVPPKRVFDFLRDESTRNEW-----DILS 579

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              +                  Q +  + +  +    + ++R+   + +Q +  +     
Sbjct: 580 NGGV-----------------VQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLI----- 617

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDT 593
           L + C+  D+ A    S +++AP+D +          PD   LLPSGF ++         
Sbjct: 618 LQESCA--DQTA----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAVL--------- 662

Query: 594 PDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFES 642
           PD   AH          VG     A G         S+LT+AFQ   +S
Sbjct: 663 PDGTGAH----------VGGMEEAAGG---------SLLTVAFQILVDS 692


>gi|224120056|ref|XP_002318231.1| predicted protein [Populus trichocarpa]
 gi|222858904|gb|EEE96451.1| predicted protein [Populus trichocarpa]
          Length = 734

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           KY R+TA Q++ LE  + ECP P   +R +L R       +E KQIK WFQNRR + K +
Sbjct: 40  KYNRHTANQIQELESFFKECPHPDEKQRSELSRRL----GLESKQIKFWFQNRRTQMKTQ 95

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E       N  L   N  L  EN+ L++ +S  +C N
Sbjct: 96  LERHE----NVILRQDNDKLRLENELLKQNMSDPICNN 129



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 114/504 (22%), Positives = 195/504 (38%), Gaps = 111/504 (22%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSL-------EVFTMFPAG-NAGTIELLYTQ 263
           A R  G+V +  + + E L D   W     SL       ++ +    G  +G +++++ +
Sbjct: 296 ATRVSGVVLVNISALVETLMDVNGWVEMFPSLIARAATTDIISSGMGGTKSGALQMIHAE 355

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               +   P R    LR    L  G   V + S+  +    N   A   V  + LPSGC+
Sbjct: 356 FQLISPFVPVRQVKFLRLCKQLTEGVWAVVDVSIDANQENLN---AQAPVTCKRLPSGCI 412

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK-VVAQRMTIA-------------- 368
           I+  + G S +  V+H   +  +V ++ RP+  S +   AQR   A              
Sbjct: 413 IQDMNNGCSKVTWVEHSEYDESAVHQLYRPILSSGRGFGAQRWLAALQRYYEGMAMIMSP 472

Query: 369 ETSGE--VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW-SLMTCDGAEDVIIAVNS 425
              GE   V  LG + ++L+  ++R+   F   V   +   W +L+  + +EDV I   +
Sbjct: 473 SILGEDQTVINLGGKKSMLK-LARRMVDNFCSGVCASSLHNWGNLVAGNVSEDVRIL--T 529

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS++    P        GI+ + A+ +   V    L  FLR+   RS W     D  S 
Sbjct: 530 RKSINEPGEPD-------GIVLSAATSVWLPVSRQRLFDFLRDEQSRSHW-----DILSN 577

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH----SLAQEDAFVSR 539
             +                              +E++++ + +G     SL +    V  
Sbjct: 578 GGML-----------------------------QEIIQIPKGQGQCNRVSLLRSTVAVDA 608

Query: 540 DI--HLLQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLDS 588
           D   + + I      +  G  S++V+AP+D     +    G      LLPSGF I+P +S
Sbjct: 609 DAGENNMLILQETRNDVSG--SQVVYAPVDIQSMSVVTSGGDSTYVALLPSGFVILPDNS 666

Query: 589 KTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNV 648
            +   P                     NP   DS S +   S  T+ FQ    SNL    
Sbjct: 667 FSNGEPSNSDG----------------NPVKRDSDSNNGGGSFFTVGFQI-LASNLPSAK 709

Query: 649 ATM-ARQYVRSVIS-SVQRVAMAI 670
            T+ + + + ++IS ++QR+  A 
Sbjct: 710 LTVESVETIHNLISCTMQRIRTAF 733


>gi|125591714|gb|EAZ32064.1| hypothetical protein OsJ_16252 [Oryza sativa Japonica Group]
          Length = 779

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 104 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 159

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E S+L++ N KL A       EN R ++ +S   C N
Sbjct: 160 HERHENSQLRSDNEKLRA-------ENMRYKEALSSASCPN 193



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 116/291 (39%), Gaps = 47/291 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW---FRDCRS----LEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   +   F +  S    LEV +   AGN  G ++++  +
Sbjct: 350 ASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVE 409

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P        ++    PSGCL
Sbjct: 410 FQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP-------VLKCRRRPSGCL 462

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  SV  + + L  S      R  +                
Sbjct: 463 IQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMAS 522

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+  +    ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 523 NIPTSDIGVITSSEGRKSML--KLAERMVVSFCGGVTASVAHQWTTLSGSGAEDV--RVM 578

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           + KS+     P        GI+   A+     VPP  +  FLR+   RSEW
Sbjct: 579 TRKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFDFLRDESSRSEW 622


>gi|302398853|gb|ADL36721.1| HD domain class transcription factor [Malus x domestica]
          Length = 824

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 27/137 (19%)

Query: 6   QQQQQQQRESSSGSIN--------KHQLDNG-----KYVRYTAEQVEALERVYSECPKPS 52
           ++ ++++ ES SGS N        +   DN      +Y R+T +Q++ LE ++ ECP P 
Sbjct: 85  RRSREEEHESRSGSDNMDGASGDDQDAADNNPRKKKRYHRHTPQQIQELEALFKECPHPD 144

Query: 53  SLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLM 109
             +R +L R      N+E +Q+K WFQNRR + K   +R E S L+  N KL A      
Sbjct: 145 EKQRLELSRRL----NLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRA------ 194

Query: 110 EENDRLQKQVSQLVCEN 126
            EN  ++  +   +C N
Sbjct: 195 -ENMSIRDAMRNPICSN 210



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 114/296 (38%), Gaps = 53/296 (17%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVF----------TMFPAGNAGT----I 257
           A+R  G+V +    + E L D   W      LE+F           +  +G  GT    +
Sbjct: 381 ASRESGMVIINSLTLVETLMDSNRW------LEMFPGVIARTSTTDVISSGMGGTRNGAL 434

Query: 258 ELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEM 317
           +L++ +    + L P R+   LR+   L  G   V + S+       + + A  F+    
Sbjct: 435 QLMHAELQVLSPLVPVREVNFLRFCKQLAEGVWAVVDVSVD---VIRDTSGAPTFMNCRR 491

Query: 318 LPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS------------------K 359
           LPSGC+++    G S +  V+H   +   V ++ RPL  S                   +
Sbjct: 492 LPSGCVVQDMPNGYSRVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWVATLQRQSEFQ 551

Query: 360 VVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
            +    ++       +   GR+  +    +QR++  F   V       W+ +   G  D 
Sbjct: 552 AILMSSSVPSRDHTAITASGRRSML--KLAQRMTDNFCAGVCASTVHKWTKLNA-GNVDE 608

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
            + V + +SL     P        G++ + A+ +   V P  L  FLR+   RSEW
Sbjct: 609 DVRVMTRESLDDPGEPP-------GVVLSAATSVWLPVSPQRLFDFLRDERLRSEW 657


>gi|187611422|sp|Q7Y0V7.2|ROC6_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC6; AltName:
           Full=GLABRA 2-like homeobox protein 6; AltName:
           Full=HD-ZIP protein ROC6; AltName: Full=Homeodomain
           transcription factor ROC6; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 6
          Length = 872

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 8/86 (9%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 87
           +Y R+T +Q++ LE V+ ECP P   +R +L R      N+E +Q+K WFQNRR + KQ 
Sbjct: 125 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKQT 180

Query: 88  ---RKEASRLQTVNRKLTAMNKLLME 110
              R E + L+  N KL A N  + E
Sbjct: 181 QIERHENALLRQENDKLRAENMTIRE 206


>gi|356550018|ref|XP_003543387.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 781

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 111 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 166

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E ++L+T N KL A       +N R ++ +    C N
Sbjct: 167 HERHENTQLRTENEKLRA-------DNMRFREALGNASCPN 200



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 96/427 (22%), Positives = 167/427 (39%), Gaps = 98/427 (22%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++  +
Sbjct: 357 ASRETAVVIMNHVNLVEILMDVNQWSTVFAGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 416

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P+P++     R    PSGCL
Sbjct: 417 VQVPSPLVPTRESYFVRYCKQHGDGTWAVVDVSLDN--LRPSPSA-----RCRRRPSGCL 469

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++   V  + + L  S      +  +A               
Sbjct: 470 IQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMAT 529

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V+      W+ ++  GA+DV   V 
Sbjct: 530 NIPTVDVGVITNQDGRKS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGADDV--RVM 585

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+ + A+     V P  +  FLR+   RSEW   +    +
Sbjct: 586 TRKSVDDPGRPP-------GIVLSAATSFWLPVSPKRVFEFLRDENSRSEWDILS----N 634

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              ++  ++   G    R TG+               + ++R+   + +Q +  +     
Sbjct: 635 GGVVQEMAHIANG----RDTGN--------------CVSLLRVNSANSSQSNMLI----- 671

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDT 593
           L + C      A    S +++AP+D +          PD   LLPSGF I+         
Sbjct: 672 LQESC------ADSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIL--------- 716

Query: 594 PDTLTAH 600
           PD  TAH
Sbjct: 717 PDGTTAH 723


>gi|357159529|ref|XP_003578475.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 1
           [Brachypodium distachyon]
          Length = 864

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE V+ ECP P   +R +L R      N+E +Q+K WFQNRR + K  
Sbjct: 129 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKTQ 184

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 185 IERHENALLRQENDKLRAENMTIRE 209



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 11/176 (6%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWF--------RDCRSLEVFTMFPAGNAGTIELLYTQ 263
           A R  GL  +   ++ + L D   W         R   +  +    P   +G+I+L++ +
Sbjct: 387 ATREVGLAIVSSAELVDSLMDAARWAEMFPCVVARASTTDIISGGMPGTRSGSIQLMHAE 446

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG---SGAGPNPASAAQFVRAEMLPS 320
               + L P R+   LR+      G   V + S  G      G    +AA ++   +LPS
Sbjct: 447 LQVLSPLVPIREVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAAAGYMGCRLLPS 506

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVY 376
           GC++     G + +  V H   +  +V  + RPL  S + +  R  +A    +  Y
Sbjct: 507 GCVVEDMRNGYAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLASLQRQCQY 562


>gi|356529444|ref|XP_003533302.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 896

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 39/199 (19%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 201 RYHRHTANQIQRLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 256

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
            E            A N  L  END+++       CEN  +++ L+      +  C S  
Sbjct: 257 HE-----------RADNCALRAENDKIR-------CENIAIREALK------NVICPSCG 292

Query: 149 TTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWV-----QMPGMKPGPDSVGIFA 203
             P +   D       L +    L E L + +  A  ++     Q+P ++P    + I +
Sbjct: 293 GPPMND--DCYFDEQKLRLENAQLKEELDRVSSIAAKYIGRPISQLPPVQP----IHISS 346

Query: 204 ISQSCSGVAARACGLVSLE 222
           +  S    A++  G  SL+
Sbjct: 347 LDLSMGTFASQGLGGPSLD 365



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/291 (20%), Positives = 120/291 (41%), Gaps = 41/291 (14%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAG-NAGTIELLYTQ 263
           A+R  G+V +    + ++  D   W           R++EV +    G ++G+++L+Y +
Sbjct: 453 ASRDSGVVIMNGLTLVDMFMDPNKWMELFPTIVTMARTIEVISSGMMGSHSGSLQLMYEE 512

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L   R+F+ LRY   ++ G   + + S       P     A   R+  LPSG  
Sbjct: 513 LQVLSPLVSTREFYFLRYCQQIEQGLWAIVDVSYD----FPQDNQFAPQYRSHRLPSGVF 568

Query: 324 IRPCDGGGSIIHIVDHLNLEAWS-VPEVLRPL-YESSKVVAQR--------------MTI 367
           I+    G S +  ++H+ +E  + V  + R L Y      AQR              + +
Sbjct: 569 IQDMPNGYSKVTWIEHVEIEDKTPVHRLYRNLIYSGIAFGAQRWLTTLQRMCERIACLMV 628

Query: 368 AETSGEVVYGLGRQPAVLRT---FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
              S   + G+   P   R+    +QR+   F  +++      W+ ++  G  ++ + V 
Sbjct: 629 TGNSTRDLGGVIPSPEGKRSMMKLAQRMVTNFCASISASAGHRWTTLSGSGMNEIGVRVT 688

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
             KS    S+P        G++ + A+ +   +PP  +  F ++   R +W
Sbjct: 689 VHKS----SDPGQP----NGVVLSAATTIWLPIPPQTVFNFFKDEKKRPQW 731


>gi|225441050|ref|XP_002283931.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51 [Vitis
           vinifera]
 gi|297740036|emb|CBI30218.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 14/139 (10%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQ+E+LER + E  K    R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 60  KKKRLTNEQLESLERSFQEEIKLEPDRKMKLAREL----GLQPRQIAVWFQNRRARWKT- 114

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL---RTAPATTDASCD 145
           KE  RL  V   L     L+ +E  +LQ++VS+L    G +++Q    + +   T+ S +
Sbjct: 115 KELERLYDV---LKQEYDLMSKEKQKLQEEVSKL---KGILREQATRKQVSMGYTEVSGE 168

Query: 146 SVVTTPQHSLRDANNPAGL 164
             V +   ++R +N P GL
Sbjct: 169 ETVESTSITIRSSNKPRGL 187


>gi|414585328|tpg|DAA35899.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 830

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           N+      +Y R+T  Q++ +E  + ECP P   +R++L RE  ++    P Q+K WFQN
Sbjct: 104 NQRPSKKKRYHRHTLHQIQEMEAFFKECPHPDDKQRKELSRELGLV----PLQVKFWFQN 159

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           +R + K + E       N +L A N+ L  EN R ++ +S   C N
Sbjct: 160 KRTQMKNQHERQE----NSQLRAENEKLRAENMRYKEALSSASCPN 201



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 88/425 (20%), Positives = 158/425 (37%), Gaps = 82/425 (19%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   +            +LEV +   AGN  G ++++  +
Sbjct: 366 ASRDSSVVIMTHASLVEILMDVNQYATVFSSIVSRAATLEVLSTGVAGNYNGALQVMSVE 425

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P RD + +RY     +G+  V + SL  S            ++    PSGCL
Sbjct: 426 FQVPSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDTSSV----------LKCRRRPSGCL 475

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  SV  + + L +S      R  +                
Sbjct: 476 IQEMPNGYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERLASVMAS 535

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GA+DV   V 
Sbjct: 536 NIPTSDIGVITSTEGRKS--MLKLAERMVTSFCGGVTASAAHQWTTLSGSGADDV--RVM 591

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAA 484
           + KS+     P        GI+   A+     + P  +  FLR+  S             
Sbjct: 592 TRKSVDDPGRPP-------GIVLNAATSFWLPITPKRVFDFLRDESSRSEARTRAPTHTQ 644

Query: 485 SLKAGSYAYPGMRPTR------------FTGSQIIMPLGHTI---EHEELLEVIRLEGHS 529
                 +  P   P               +   ++  + H     +H   + ++R+   +
Sbjct: 645 FFFNREHVLPSYEPPFLFFFFLFLQWDILSNGGVVQEMAHIANGRDHGNCVSLLRVNQST 704

Query: 530 LAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSG 580
            + +    S  + L + C+    +A G  S +++AP+D +          PD   LLPSG
Sbjct: 705 NSTQ----SNMLILQESCT----DASG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSG 754

Query: 581 FRIIP 585
           F I+P
Sbjct: 755 FAILP 759


>gi|110430672|gb|ABG73462.1| homeodomain transcription factor [Oryza brachyantha]
          Length = 844

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE V+ ECP P   +R +L R      N+E +Q+K WFQNRR + K  
Sbjct: 129 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKTQ 184

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 185 IERHENALLRQENDKLRAENMTIRE 209


>gi|357159532|ref|XP_003578476.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 2
           [Brachypodium distachyon]
          Length = 777

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE V+ ECP P   +R +L R      N+E +Q+K WFQNRR + K  
Sbjct: 42  RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKTQ 97

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 98  IERHENALLRQENDKLRAENMTIRE 122



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 11/176 (6%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWF--------RDCRSLEVFTMFPAGNAGTIELLYTQ 263
           A R  GL  +   ++ + L D   W         R   +  +    P   +G+I+L++ +
Sbjct: 300 ATREVGLAIVSSAELVDSLMDAARWAEMFPCVVARASTTDIISGGMPGTRSGSIQLMHAE 359

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG---SGAGPNPASAAQFVRAEMLPS 320
               + L P R+   LR+      G   V + S  G      G    +AA ++   +LPS
Sbjct: 360 LQVLSPLVPIREVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAAAGYMGCRLLPS 419

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVY 376
           GC++     G + +  V H   +  +V  + RPL  S + +  R  +A    +  Y
Sbjct: 420 GCVVEDMRNGYAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLASLQRQCQY 475


>gi|345194180|tpg|DAA34955.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414585327|tpg|DAA35898.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 795

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           N+      +Y R+T  Q++ +E  + ECP P   +R++L RE  ++    P Q+K WFQN
Sbjct: 104 NQRPSKKKRYHRHTLHQIQEMEAFFKECPHPDDKQRKELSRELGLV----PLQVKFWFQN 159

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           +R + K + E       N +L A N+ L  EN R ++ +S   C N
Sbjct: 160 KRTQMKNQHERQE----NSQLRAENEKLRAENMRYKEALSSASCPN 201



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 91/412 (22%), Positives = 160/412 (38%), Gaps = 91/412 (22%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   +            +LEV +   AGN  G ++++  +
Sbjct: 366 ASRDSSVVIMTHASLVEILMDVNQYATVFSSIVSRAATLEVLSTGVAGNYNGALQVMSVE 425

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P RD + +RY     +G+  V + SL  S            ++    PSGCL
Sbjct: 426 FQVPSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDTS----------SVLKCRRRPSGCL 475

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  SV  + + L +S      R  +                
Sbjct: 476 IQEMPNGYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERLASVMAS 535

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GA+DV   V 
Sbjct: 536 NIPTSDIGVITSTEGRKS--MLKLAERMVTSFCGGVTASAAHQWTTLSGSGADDV--RVM 591

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+   A+     + P  +  FLR+   RSEW     D  S
Sbjct: 592 TRKSVDDPGRPP-------GIVLNAATSFWLPITPKRVFDFLRDESSRSEW-----DILS 639

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              +                  Q +  + +  +H   + ++R+   + + +    S  + 
Sbjct: 640 NGGV-----------------VQEMAHIANGRDHGNCVSLLRVNQSTNSTQ----SNMLI 678

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
           L + C+    +A G  S +++AP+D +          PD   LLPSGF I+P
Sbjct: 679 LQESCT----DASG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 724


>gi|115474701|ref|NP_001060947.1| Os08g0136100 [Oryza sativa Japonica Group]
 gi|31339107|dbj|BAC77160.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113622916|dbj|BAF22861.1| Os08g0136100, partial [Oryza sativa Japonica Group]
          Length = 130

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 4   RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 59

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E       N  L A N+ L  EN R ++ ++   C N
Sbjct: 60  HERHE----NNALRAENEKLRAENMRYKEALANASCPN 93


>gi|125571186|gb|EAZ12701.1| hypothetical protein OsJ_02619 [Oryza sativa Japonica Group]
          Length = 840

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE V+ ECP P   +R +L R      N+E +Q+K WFQNRR + K  
Sbjct: 125 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKTQ 180

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 181 IERHENALLRQENDKLRAENMTIRE 205


>gi|449454863|ref|XP_004145173.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
 gi|449474595|ref|XP_004154226.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
 gi|449516709|ref|XP_004165389.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 696

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R+QL RE      +EP Q+K WFQN+R + K +
Sbjct: 21  RYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSREL----GLEPLQVKFWFQNKRTQIKAQ 76

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           +E       N  L A N+ L  EN R ++ +S   C N
Sbjct: 77  QERHE----NAILKAQNEKLRAENMRYKEALSNTSCPN 110



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 96/437 (21%), Positives = 178/437 (40%), Gaps = 93/437 (21%)

Query: 185 DWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW-------F 237
           ++++    + GP  VG+       +  A+R   +++    K+  IL D   W        
Sbjct: 246 EYLRTYSTRIGPRIVGL-------TSEASRQTSILAFNHLKLVHILMDVNQWSTIFCGIV 298

Query: 238 RDCRSLEVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERS 296
               +LEV +    G+  G ++++  +   P+ L P R+ + +RY      GS  V + S
Sbjct: 299 SRALTLEVLSSGVGGDYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQQGEGSWAVVDVS 358

Query: 297 LSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPL-- 354
           L      P P S     R    PSGCLI+    G S +  V+H+ ++  +V  + + +  
Sbjct: 359 L--DYLRPTPTS-----RTRRRPSGCLIQELPNGYSKVTWVEHVEVDDRAVHSLYKGVVT 411

Query: 355 ----YESSKVVA------QRMTIAETSGE------VVYGLGRQPAVLRTFSQRLSRGFND 398
               + + + +A      QR+T + ++        VV G   + +V++  ++R+ R F  
Sbjct: 412 CGLAFGAKRWMATLGRQCQRLTNSSSTNIPALDICVVTGQEGRKSVMK-LAERMVRSFCS 470

Query: 399 AVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVP 458
            V       W+ ++   ++DV   V + KSL     P        GI+   A+     +P
Sbjct: 471 GVGAATAHNWTTLSTIDSDDV--RVMARKSLDDPGRPP-------GIVLNAATSFWIPIP 521

Query: 459 PALLVRFLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEH 516
           P  +  FLR+   R++W     D  S   L                  Q +  +G+    
Sbjct: 522 PNRVFNFLRDQNTRNQW-----DILSNGGL-----------------VQEMARIGNDRNS 559

Query: 517 EELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF------ 570
              + ++R+   + +Q +  +     L + CS   ++  G  S +++AP+D         
Sbjct: 560 GNCVSLLRVNSANSSQSNMLI-----LQESCS---DDISG--SYIIYAPVDTAAMNMVLS 609

Query: 571 ---PDDGPLLPSGFRII 584
              PD   LLPSGF I+
Sbjct: 610 GGDPDYVALLPSGFAIL 626


>gi|51872287|gb|AAU12247.1| homeodomain protein HOX3 [Gossypium hirsutum]
          Length = 713

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 30/124 (24%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
           Y R+TA Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K + 
Sbjct: 31  YHRHTAHQIQRLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQH 86

Query: 90  EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA--------PATTD 141
           E            A N  L  END+++       CEN  +++ L+          PA  D
Sbjct: 87  E-----------RADNSALRAENDKIR-------CENIAIREALKNVICPSCGGPPANED 128

Query: 142 ASCD 145
           +  D
Sbjct: 129 SYFD 132



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 200/509 (39%), Gaps = 126/509 (24%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGNAGT----IELL 260
           A+R  G+V +    + ++  D   W           +++EV +    G  GT    ++L+
Sbjct: 283 ASRDSGVVIMNGLALVDMFMDSNKWLELFPTIVSIAKTIEVIS---PGMLGTHRCSLQLM 339

Query: 261 YTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPS 320
           Y +    + L P R+F+TLRY   ++ G   +   S         P  A+Q  R+  LPS
Sbjct: 340 YEELQVLSPLVPTREFYTLRYCQQIEQGLWAIVNVSYDL------PQFASQ-CRSHRLPS 392

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWS-VPEVLRPLYESSKVVA--------QRMT----- 366
           GCLI+    G S +  ++ + +E  + +  + R L  S             QRM      
Sbjct: 393 GCLIQDMPNGYSKVTWLERVEIEDKTPIHRLYRDLVHSGSAFGAERWLTTLQRMCEWFAC 452

Query: 367 --IAETSGEVVYGLGRQPAVLRT---FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVII 421
             ++ TS   + G+   P   R+    +QR+   F  +V   N    +  T  G+ +V +
Sbjct: 453 LRVSSTSTRDLGGVIPSPEGRRSMMKLAQRMVNNFCTSVGTSNSHRST--TLSGSNEVGV 510

Query: 422 AVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRS--EWADFNVD 479
            V   KS    S+P        GI+ + A+     V P  +  F ++ R+  +W   +  
Sbjct: 511 RVTVHKS----SDPGQP----NGIVLSAATTFWLPVSPQNVFNFFKDERTRPQWDVLS-- 560

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
             +  +++  ++   G  P    G+ I +       H  +L         + QE      
Sbjct: 561 --NGNAVQEVAHIANGSHP----GNCISVLRAFNTSHNNML---------ILQE------ 599

Query: 540 DIHLLQICSGVDENAVGACSELVFAPID------EMFPDDG---PLLPSGFRIIPLDSKT 590
                   S +D +     S +V+ P+D       M  +D    PLLPSGF I      T
Sbjct: 600 --------SCIDSSG----SLVVYCPVDLPAINVAMSGEDPSYIPLLPSGFTI------T 641

Query: 591 PDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTR----SVLTIAFQFPFESNLQD 646
           PD                LE G      A  SSS  H R    S++T+AFQ    S    
Sbjct: 642 PD--------------GHLEQG----DGASTSSSTGHGRSSGGSLITVAFQILVSSLPSA 683

Query: 647 NVATMARQYVRSVIS-SVQRVAMAI-CPS 673
            +   +   V ++I+ +VQ++  A+ CPS
Sbjct: 684 KLNLDSVTIVNNLIANTVQQIKAALNCPS 712


>gi|449534134|ref|XP_004174022.1| PREDICTED: homeobox-leucine zipper protein ROC2-like, partial
           [Cucumis sativus]
          Length = 169

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 9/114 (7%)

Query: 14  ESSSGSINKHQLDNGK-YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPK 72
           ES+ G+  + Q    K Y R+T  Q++ +E  + ECP P   +R +L RE      +EP 
Sbjct: 36  ESACGTDQQQQRSKKKRYNRHTQHQIQEMEAFFKECPHPDDKQRMELSREL----GLEPL 91

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           Q+K WFQN+R + K + E       N  L A N+ L  EN R ++  +   C N
Sbjct: 92  QVKFWFQNKRTQMKAQHERHE----NAILKAENEKLRAENIRYREAFAHSTCPN 141


>gi|115467006|ref|NP_001057102.1| Os06g0208100 [Oryza sativa Japonica Group]
 gi|31339109|dbj|BAC77161.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113595142|dbj|BAF19016.1| Os06g0208100, partial [Oryza sativa Japonica Group]
          Length = 129

 Score = 66.6 bits (161), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 17/128 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K +
Sbjct: 4   RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 59

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENGYMKQQLRTAPAT 139
            E +     N  L A N  +  EN  +++ +  ++C         E+ + +Q+LR   A 
Sbjct: 60  HERAD----NCFLRAENDKIRCENIAIREALKNVICPTCGGPPVGEDYFDEQKLRMENAR 115

Query: 140 TDASCDSV 147
                D V
Sbjct: 116 LKEELDRV 123


>gi|255574032|ref|XP_002527933.1| homeobox protein, putative [Ricinus communis]
 gi|223532666|gb|EEF34449.1| homeobox protein, putative [Ricinus communis]
          Length = 713

 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 46/170 (27%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA QV+ LE ++ ECP P   +R QL RE      +  +QIK WFQNRR + K +
Sbjct: 35  RYHRHTANQVQKLESMFKECPHPDEKQRLQLSREL----GLTQRQIKFWFQNRRTQMKAQ 90

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA--------PATT 140
            E            A N  L  END+++       CEN  +++ L+          P T 
Sbjct: 91  HE-----------RADNCALRAENDKIR-------CENIAIREALKNVICPSCGGPPVTE 132

Query: 141 DASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMP 190
           D+  D      +H LR  N+           L E L + +  A  ++  P
Sbjct: 133 DSYFD------EHKLRMENS----------QLKEELDRVSSIAAKYIGRP 166



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 106/504 (21%), Positives = 199/504 (39%), Gaps = 117/504 (23%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAG-NAGTIELLYTQ 263
           A+R  G+V +    + ++  D   W           + LEV +    G ++G++ L+Y +
Sbjct: 284 ASRDSGVVIMNSLALVDMFMDANKWVELFPTIVSISKPLEVISSGMMGSHSGSLHLMYEE 343

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF---VRAEMLPS 320
               + L P R+F+ LRY   ++ G   +   S              QF    R+  LPS
Sbjct: 344 LQVLSPLVPTREFYILRYCQQIEQGLWAIVNVSY----------DIQQFSSQCRSHRLPS 393

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWS-VPEVLRPLYESS------------KVVAQRMTI 367
           GCLI+    G S +  V+H+ +E  +    + R L  S             + + +R   
Sbjct: 394 GCLIQDMPNGYSKVTWVEHVEVEDKNPTHRLYRDLIHSGMAFGAERWLATLQRMCERFAC 453

Query: 368 AETSGEVVYGLGR---QPAVLRT---FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVII 421
              SG +   LG     P   R+    +QR++  F  +++  N   W+ ++  G+ +V +
Sbjct: 454 LMVSGNLTRDLGGVIPSPDGKRSMMKLAQRMANSFCSSISTSNSHRWTAIS--GSNEVGV 511

Query: 422 AVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
            V+ +      ++P        G++   A+     V P  +  F ++ R+  A ++V + 
Sbjct: 512 RVHKS------TDPGQP----NGVVLNAATTFWLPVSPQNVFNFFKDERTR-AQWDVLS- 559

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
           S  +++  ++   G  P                            G+ ++   AF S   
Sbjct: 560 SGNAVQEVAHIANGSHP----------------------------GNCISVLRAFNSGQN 591

Query: 542 HLLQICSGVDENAVGACSEL-VFAPID------EMFPDDG---PLLPSGFRIIPLDSKTP 591
           ++L +     E+ + +   L V+ P+D       M  +D    PLLPSGF I P     P
Sbjct: 592 NMLIL----QESCIDSSGSLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTICP--DGRP 645

Query: 592 DTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
           D  D                  A+  +    S C  + S++T++FQ    S     +   
Sbjct: 646 DHGDG-----------------ASTSSNAHGSMCRSSGSLITVSFQILVSSLPSAKLNME 688

Query: 652 ARQYVRSVI-SSVQRVAMAI-CPS 673
           +   V ++I ++VQ++  A+ CP+
Sbjct: 689 SVTTVNNLINTTVQQIKAAMNCPN 712


>gi|125564438|gb|EAZ09818.1| hypothetical protein OsI_32106 [Oryza sativa Indica Group]
          Length = 815

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE V+ ECP P   +R +L R      N+E +Q+K WFQNRR + K  
Sbjct: 124 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKTQ 179

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 180 IERHENALLRQENDKLRAENMTIRE 204


>gi|359490389|ref|XP_003634081.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Vitis vinifera]
          Length = 783

 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 93/421 (22%), Positives = 149/421 (35%), Gaps = 116/421 (27%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 87
           KY R+T EQ+  LE  + E P P   +R  L R+     N+EP+Q+K WFQNRR + K  
Sbjct: 104 KYHRHTQEQINELETCFKEWPHPDEKQRLDLSRKL----NLEPRQVKFWFQNRRTQMKNQ 159

Query: 88  ---------RKEASRLQTVNRKL---------------TAMNKLLMEENDRLQKQVSQLV 123
                    R+E  +L+  N  +                 +  + +EEN        QL 
Sbjct: 160 LERHENVMLRQENDKLRVENVAIKDAVRNPICNHCGGVAMLGNITIEEN--------QLR 211

Query: 124 CENGYMKQQLRTAPATTDASCDSVVT---TPQHSLRDANN-------------------- 160
            EN  ++ +L       +      VT   +P    R ++N                    
Sbjct: 212 VENAQLRDELSRICGLAEKFLGRPVTPLASPIALPRPSSNLELEVAGNGFGGLNSGGTPL 271

Query: 161 PAGLLS------------------IAEETLAEFLSKATGTAVDWV-QMPGMKPGPDSVGI 201
           P G L+                  +A   + E L  A   +  W+  + G K   + V  
Sbjct: 272 PMGPLTRPGMMGVEKPFNSSVFVELAVTAMDELLRLAQADSPIWMTSLDGGKETLNPVEY 331

Query: 202 FAISQSCSGV--------AARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
                 C G+        A+R  G+V +    + E L D   W +         MFP   
Sbjct: 332 MRTFSPCIGLKPSGFVTEASRETGMVMINSLALVETLMDGSRWAQ---------MFPCVI 382

Query: 254 A-----------------GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERS 296
           A                 G ++L++ +    + L P R    LR+      G   V + S
Sbjct: 383 AKASTTDVLSSGIGRTRHGALQLMHAELQVLSPLVPVRQVKFLRFCKQHGEGLWAVVDVS 442

Query: 297 LSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYE 356
           +  +  G   AS   FV    L SGC+++    G + +  ++H   +  +V  + R L  
Sbjct: 443 IDTALDG---ASINSFVNCRRLLSGCVVQDLSNGYTRVTWIEHSEYDESAVHYLYRSLLS 499

Query: 357 S 357
           S
Sbjct: 500 S 500


>gi|115480263|ref|NP_001063725.1| Os09g0526300 [Oryza sativa Japonica Group]
 gi|113631958|dbj|BAF25639.1| Os09g0526300, partial [Oryza sativa Japonica Group]
          Length = 131

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 8/86 (9%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 87
           +Y R+T +Q++ LE V+ ECP P   +R +L R      N+E +Q+K WFQNRR + KQ 
Sbjct: 4   RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKQT 59

Query: 88  ---RKEASRLQTVNRKLTAMNKLLME 110
              R E + L+  N KL A N  + E
Sbjct: 60  QIERHENALLRQENDKLRAENMTIRE 85


>gi|345193173|tpg|DAA34952.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414886368|tpg|DAA62382.1| TPA: outer cell layer3 [Zea mays]
          Length = 863

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE V+ ECP P   +R +L +      N+E +Q+K WFQNRR + K  
Sbjct: 123 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSKRL----NLESRQVKFWFQNRRTQMKTQ 178

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 179 IERHENALLRQENDKLRAENMTIRE 203



 Score = 44.3 bits (103), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 6/129 (4%)

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS------GSGAGPNPA 307
           +G+I+L++ +    + L P R+   LR+      G   V + S+       G        
Sbjct: 445 SGSIQLMHAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAILRPDGGHHHAQNG 504

Query: 308 SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI 367
             A ++   +LP+GC+++  + G S +  V H   +   V ++ RPL +S + +  R  +
Sbjct: 505 GGAGYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDEAVVHQLYRPLLQSGQALGARRWL 564

Query: 368 AETSGEVVY 376
           A    +  Y
Sbjct: 565 ASLQRQCQY 573


>gi|60099377|dbj|BAD89978.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 339

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 24/182 (13%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           ++G+   ++    KY R+T +Q+  +E ++ E P P   +RQQL ++      + P+Q+K
Sbjct: 89  AAGNKGTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVK 144

Query: 76  VWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEE--------------NDRLQKQ 118
            WFQNRR + K   +R E S L+    KL   NK + E                D L  +
Sbjct: 145 FWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGPDDLHLE 204

Query: 119 VSQLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSK 178
            S+L  E   ++  L   P    ASC       +H L   +   G+ ++ +  +AE  ++
Sbjct: 205 NSKLKAELDKLRAALGRTPYPLQASCSD---DQEHRLGSLDFYTGVFALEKSRIAEISNR 261

Query: 179 AT 180
           AT
Sbjct: 262 AT 263


>gi|162462506|ref|NP_001105125.1| outer cell layer3 [Zea mays]
 gi|8920423|emb|CAB96423.1| OCL3 protein [Zea mays]
          Length = 863

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE V+ ECP P   +R +L +      N+E +Q+K WFQNRR + K  
Sbjct: 123 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSKRL----NLESRQVKFWFQNRRTQMKTQ 178

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 179 IERHENALLRQENDKLRAENMTIRE 203



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 6/129 (4%)

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS------GSGAGPNPA 307
           +G+I+L++ +    + L P R+   LR+      G   V + S+       G        
Sbjct: 445 SGSIQLMHAELQVLSPLVPIREVVFLRFCKQHAKGLWAVVDVSVDAILRPDGGHHHAQNG 504

Query: 308 SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTI 367
             A ++   +LP+GC+++  + G S +  V H   +   V ++ RPL +S + +  R  +
Sbjct: 505 GGAGYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDEAVVHQLYRPLLQSGQALGARRWL 564

Query: 368 AETSGEVVY 376
           A    +  Y
Sbjct: 565 ASLQRQCQY 573


>gi|60099371|dbj|BAD89976.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 397

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 42/256 (16%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           ++G+   ++    KY R+T +Q+  +E ++ E P P   +RQQL ++      + P+Q+K
Sbjct: 89  AAGNKGTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVK 144

Query: 76  VWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEE--------------NDRLQKQ 118
            WFQNRR + K   +R E S L+    KL   NK + E                D L  +
Sbjct: 145 FWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGPDDLHLE 204

Query: 119 VSQLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSK 178
            S+L  E   ++  L   P    ASC       +H L   +   G+ ++ +  +AE  ++
Sbjct: 205 NSKLKAELDKLRAALGRTPYPLQASCSD---DQEHRLGSLDFYTGVFALEKSRIAEISNR 261

Query: 179 AT------GTAVDWVQMPGMKPGPDSVGI------FAISQSCSG------VAARACGLVS 220
           AT       T+ + + +  ++ G + +        F  +Q+ S        A+R  G+V 
Sbjct: 262 ATLELQKMATSGEPMWLRSVETGREILNYDEYLKEFPQAQASSFPGRKTIEASRDAGIVF 321

Query: 221 LEPTKIAEILKDRPSW 236
           ++  K+A+   D   W
Sbjct: 322 MDAHKLAQSFMDVGQW 337


>gi|449527811|ref|XP_004170903.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           GLABRA 2-like, partial [Cucumis sativus]
          Length = 416

 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 171/423 (40%), Gaps = 84/423 (19%)

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
           N G ++L++ +    T L P R+ + +R+   LD     + + S+          S    
Sbjct: 29  NNGAVQLMFAEVQMLTPLVPTREMYFIRHCKQLDAEQWAIVDVSIENVEDNNIDVS---L 85

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
           V+    PSGC+I+    G   + +V+HL      V  + R +  +      R  +A    
Sbjct: 86  VKYRKRPSGCIIKDEPNGHCKVTMVEHLECVKNKVHNLYRSIVNNGTAFGARHWMATLQL 145

Query: 369 ----------------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMT 412
                           +++G  V  L  + + L+  +QR+S  F+ AV   +   W+ + 
Sbjct: 146 QCERSAFFMATNIPMKDSTG--VSTLAGRKSTLK-LAQRMSCSFSQAVAASSYQTWTKVV 202

Query: 413 CDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--R 470
               ED  I V S K+LS    P      +G ILCA +S+ L  + P LL  F R+   R
Sbjct: 203 GKSGED--IRVCSRKNLSDPGEP------IGVILCAVSSLWLP-LSPHLLFDFFRDESRR 253

Query: 471 SEW-ADFNVD-AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH 528
           S+W A F  D A + A+L  G              S  I  +G    +   + +++    
Sbjct: 254 SQWDAMFGGDKAKTIANLAKGQ---------DRGNSVTIQTIGSKENNNNNMWILQDSST 304

Query: 529 SLAQEDAFVSR-DIHLLQ-ICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIP- 585
           + ++     S  D+  +Q + SG D  +V                    +LPSGF I+P 
Sbjct: 305 NSSESMVVYSGVDVTSMQSVMSGCDSGSV-------------------TILPSGFXILPD 345

Query: 586 -LDSKTP---------DTPDTLTAHRTLDLTSSLEVGPATNPAAGDS-SSCHHTRSVLTI 634
             DS+ P          T DT   H    LT+++++   T+PAA  +  S  + +S++  
Sbjct: 346 GADSRPPLLITRRKDDKTSDT---HGGALLTAAVQILTDTSPAAKPTLESVEYVKSIICC 402

Query: 635 AFQ 637
             +
Sbjct: 403 TLK 405


>gi|242049914|ref|XP_002462701.1| hypothetical protein SORBIDRAFT_02g030470 [Sorghum bicolor]
 gi|241926078|gb|EER99222.1| hypothetical protein SORBIDRAFT_02g030470 [Sorghum bicolor]
          Length = 872

 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE V+ ECP P   +R +L +      N+E +Q+K WFQNRR + K  
Sbjct: 126 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSKRL----NLESRQVKFWFQNRRTQMKTQ 181

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 182 IERHENALLRQENDKLRAENMTIRE 206


>gi|297608080|ref|NP_001061150.2| Os08g0187500 [Oryza sativa Japonica Group]
 gi|255678202|dbj|BAF23064.2| Os08g0187500 [Oryza sativa Japonica Group]
          Length = 326

 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 109 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 164

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E    +  N +L A N  L  EN R ++ +S   C N
Sbjct: 165 HE----RHENAQLRAENDKLRAENMRYKEALSSASCPN 198


>gi|218195394|gb|EEC77821.1| hypothetical protein OsI_17027 [Oryza sativa Indica Group]
          Length = 849

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 14/99 (14%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K  
Sbjct: 123 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 178

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            +R E S L+  N KL +       EN  +++  S  VC
Sbjct: 179 LERHENSLLKQENDKLRS-------ENLSIREATSNAVC 210


>gi|225464265|ref|XP_002271012.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Vitis
           vinifera]
          Length = 715

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 18/129 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 29  RYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELA----LAPRQIKFWFQNRRTQMKAQ 84

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENGYM-KQQLRTAPA 138
            E +     N  L   N  +  EN  +++ +  ++C         E+ Y  +Q+LR   A
Sbjct: 85  HERAD----NCALRVENDKIRCENIAIREALKNVICPSCGGPPIGEDSYFDEQKLRVENA 140

Query: 139 TTDASCDSV 147
                 D V
Sbjct: 141 QLKEELDRV 149



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 43/291 (14%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTM-FPAGNAGTIELLYTQ 263
           A+R  G+V +    + +I  D   W           R+LEV +     G +G+++L+Y +
Sbjct: 281 ASRDSGVVIMNSLALVDIFMDSNKWMELFPTIVSMARTLEVLSSGMMGGQSGSLQLMYGE 340

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               ++L P R+F+ LRY   ++ GS  + + S       P     A    +  LPSGCL
Sbjct: 341 LQVLSSLVPTREFYFLRYCQQIEQGSWAIVDVSYD----FPRDNQFAPQNPSHRLPSGCL 396

Query: 324 IRPCDGGGSIIHIVDHLNLEAWS-VPEVLRPLY--------ESSKVVAQRM-------TI 367
           I+    G S +  V+H+ +E  +    + R L         E      QRM        +
Sbjct: 397 IQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGLAFGAERWLATLQRMCERFACLMV 456

Query: 368 AETSGEVVYGLGRQPAVLRT---FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
             TS   + G+   P   R+    +QR+   F  +++  N   W+  T  G  +V + V 
Sbjct: 457 KGTSTRDLGGVIPSPDGKRSMMKLAQRMVNNFCASISTSNGHRWT--TLSGLNEVGVRVT 514

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRS--EW 473
             K+    ++P        G++ + A+ +   V P  +  F R+ R+  +W
Sbjct: 515 IHKN----TDPGQP----NGVVLSAATTIWLPVSPQNVFNFFRDERTRPQW 557


>gi|356511234|ref|XP_003524332.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 713

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 23  RYHRHTANQIQRLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 78

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            E +     N  L A N  +  EN  +++ +  ++C
Sbjct: 79  HERAD----NCALRADNDKIRCENIAIREALKNVIC 110



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 125/292 (42%), Gaps = 44/292 (15%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R  G+V L    + ++  D   W +         R+++V +    G+ +G+++L+Y +
Sbjct: 279 ASRDSGVVLLNSLALVDMFMDPNKWIQLFPTIVSVARTIQVISSGVMGSCSGSLQLMYQE 338

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L   R+F+ LRY   ++ G+  V + S       P  +  A   R+   PSGCL
Sbjct: 339 LQVLSPLVSTREFYFLRYCQQIEQGTWAVMDVSYDF----PQDSHFAPQFRSHRCPSGCL 394

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVL--RPLYESSKVVAQR---------------MT 366
           I+    G S I  ++H+ +E  ++P  L    +Y      A+R               M 
Sbjct: 395 IQDMPDGHSKITWIEHVEIEDKTLPHRLYRNLIYSGMAFGAERWLTTLQRMCERFTYLMA 454

Query: 367 IAETSGEVVYGLGRQPAVLRT---FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
            +  + + + G+   P   R+    +QR+   F  +++  +   W+  T  G  ++++ V
Sbjct: 455 TSNPTRDNLGGVISSPEGKRSMMKLAQRMVTDFCASISTSSGHRWT--TLSGLNEIVVRV 512

Query: 424 NSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
              KS    S+P        G++ + A+ +    PP  +  F ++   R +W
Sbjct: 513 TVHKS----SDPGQP----NGVVLSAATTIWLPTPPHTVFNFFKDENKRPQW 556


>gi|147856728|emb|CAN83483.1| hypothetical protein VITISV_009450 [Vitis vinifera]
          Length = 717

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 18/129 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 31  RYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELA----LAPRQIKFWFQNRRTQMKAQ 86

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENGYM-KQQLRTAPA 138
            E +     N  L   N  +  EN  +++ +  ++C         E+ Y  +Q+LR   A
Sbjct: 87  HERAD----NCALRVENDKIRCENIAIREALKNVICPSCGGPPIGEDSYFDEQKLRVENA 142

Query: 139 TTDASCDSV 147
                 D V
Sbjct: 143 QLKEELDRV 151



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 43/291 (14%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTM-FPAGNAGTIELLYTQ 263
           A+R  G+V +    + +I  D   W           R+LEV +     G +G+++L+Y +
Sbjct: 283 ASRDSGVVIMNSLALVDIFMDSNKWMELFPTIVSMARTLEVLSSGMMGGQSGSLQLMYGE 342

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R+F+ LRY   ++ GS  + + S       P     A    +  LPSGCL
Sbjct: 343 LQVLSXLVPTREFYFLRYCQQIEQGSWAIVDVSYD----FPRDNQFAPQNPSHRLPSGCL 398

Query: 324 IRPCDGGGSIIHIVDHLNLEAWS-VPEVLRPLY--------ESSKVVAQRM-------TI 367
           I+    G S +  V+H+ +E  +    + R L         E      QRM        +
Sbjct: 399 IQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGLAFGAERWLATLQRMCERFACLMV 458

Query: 368 AETSGEVVYGLGRQPAVLRT---FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
             TS   + G+   P   R+    +QR+   F  +++  N   W+  T  G  +V + V 
Sbjct: 459 KGTSTRDLGGVIPSPDGKRSMMKLAQRMVNNFCASISTSNGHRWT--TLSGLNEVGVRVT 516

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRS--EW 473
             K+    ++P        G++ + A+ +   V P  +  F R+ R+  +W
Sbjct: 517 IHKN----TDPGQP----NGVVLSAATTIWLPVSPQNVFNFFRDERTRPQW 559


>gi|296088020|emb|CBI35303.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 18/129 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 29  RYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELA----LAPRQIKFWFQNRRTQMKAQ 84

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENGYM-KQQLRTAPA 138
            E +     N  L   N  +  EN  +++ +  ++C         E+ Y  +Q+LR   A
Sbjct: 85  HERAD----NCALRVENDKIRCENIAIREALKNVICPSCGGPPIGEDSYFDEQKLRVENA 140

Query: 139 TTDASCDSV 147
                 D V
Sbjct: 141 QLKEELDRV 149



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 43/291 (14%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTM-FPAGNAGTIELLYTQ 263
           A+R  G+V +    + +I  D   W           R+LEV +     G +G+++L+Y +
Sbjct: 281 ASRDSGVVIMNSLALVDIFMDSNKWMELFPTIVSMARTLEVLSSGMMGGQSGSLQLMYGE 340

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               ++L P R+F+ LRY   ++ GS  + + S       P     A    +  LPSGCL
Sbjct: 341 LQVLSSLVPTREFYFLRYCQQIEQGSWAIVDVSYD----FPRDNQFAPQNPSHRLPSGCL 396

Query: 324 IRPCDGGGSIIHIVDHLNLEAWS-VPEVLRPLY--------ESSKVVAQRM-------TI 367
           I+    G S +  V+H+ +E  +    + R L         E      QRM        +
Sbjct: 397 IQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGLAFGAERWLATLQRMCERFACLMV 456

Query: 368 AETSGEVVYGLGRQPAVLRT---FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
             TS   + G+   P   R+    +QR+   F  +++  N   W+  T  G  +V + V 
Sbjct: 457 KGTSTRDLGGVIPSPDGKRSMMKLAQRMVNNFCASISTSNGHRWT--TLSGLNEVGVRVT 514

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRS--EW 473
             K+    ++P        G++ + A+ +   V P  +  F R+ R+  +W
Sbjct: 515 IHKN----TDPGQP----NGVVLSAATTIWLPVSPQNVFNFFRDERTRPQW 557


>gi|31339101|dbj|BAC77157.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 813

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 14/99 (14%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K  
Sbjct: 107 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 162

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            +R E S L+  N KL +       EN  +++  S  VC
Sbjct: 163 LERHENSLLKQENDKLRS-------ENLSIREATSNAVC 194



 Score = 40.0 bits (92), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 91/230 (39%), Gaps = 37/230 (16%)

Query: 270 LAPARDFWTLRYTTTLDNGSLVVCERSLSG--SGAGPNPASAAQFVRAEMLPSGCLIRPC 327
           L P R+   LR++  L +G   V + S        G   AS+   +    LPSGC+++  
Sbjct: 448 LVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRLPSGCVLQDT 507

Query: 328 DGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA--------QR-----------MTIA 368
             G   +  V+H   +  SV  + RPL  S   +         QR           + + 
Sbjct: 508 PNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLALLMSSIALP 567

Query: 369 ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL---MTCDGAEDVIIAVNS 425
           E     ++  G++   +   ++R++  F   V+  +   WS    +T +  EDV   V +
Sbjct: 568 ENDSSAIHPEGKRS--MLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIGEDV--HVMA 623

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
            KS+     P        G++ + A+ +   V P  L  FL     R+EW
Sbjct: 624 RKSVDEPGTPX-------GVVLSAATSVWMPVMPERLFNFLHNKGLRAEW 666


>gi|326523973|dbj|BAJ96997.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 774

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 30/162 (18%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T +Q++ LE V+ ECP P   +R +L R      N+E +Q+K WFQNRR + K +
Sbjct: 47  RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKTQ 102

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
            E              N LL +END+L+        EN  +++ +R+    T  +C    
Sbjct: 103 IERHE-----------NALLRQENDKLR-------TENMTIREAMRS---PTCGNCGGAA 141

Query: 149 TTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMP 190
              + SL + +     L I    L + L +    A  ++  P
Sbjct: 142 VLGEVSLEEQH-----LRIENSRLKDELDRVCALAGKFLGRP 178



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 110/526 (20%), Positives = 194/526 (36%), Gaps = 120/526 (22%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A R  G+  +    +   L +   W            ++E+ +    G  +G+I+L+  +
Sbjct: 309 ATREVGIAIINSVDLVNSLMNEARWSEMFPCVVARASTMEIISSGMGGTRSGSIQLMRAE 368

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG---SGAGPNPASAAQFVRAEMLPS 320
               + L P R+   LR+     +G   + + S+ G     +G   A  A ++   +LPS
Sbjct: 369 LQVLSPLVPIREVTFLRFCKQHADGLWAIVDVSVDGVLRPDSGAGGAGPAGYMGCRLLPS 428

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGL-- 378
           GC++     G + +  V H   +  +V E+ RPL  S + +  R  +A    +  Y    
Sbjct: 429 GCIVEDMQNGYAKVTWVVHAEYDEAAVHELYRPLLRSGQALGARRWLASLQRQCEYHAIL 488

Query: 379 ---------GRQPAV-------LRTFSQRLSRGFNDAVNGFNDDGWSLM----------- 411
                     R  A+       +   +QR++  F   V       W  +           
Sbjct: 489 CSNPHPNHGDRHEAISPAGRRCMLRLAQRMADNFCAGVCATAAQKWRRLDEWRVEGAGGR 548

Query: 412 -TCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH- 469
               G ED +  + + +S+     P       G +L A  S+ L    P  +  +LR+  
Sbjct: 549 EQASGGEDKVRMM-ARQSVGAPGEPP------GVVLSATTSVRLPGTSPQRVFDYLRDEQ 601

Query: 470 -RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH 528
            R EW            + A   A            Q +  +     H   + ++R    
Sbjct: 602 RRGEW-----------DILANGEAM-----------QEMDHIAKGQHHGNAVSLLRPNAT 639

Query: 529 SLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPID------EMFPDDGP---LLPS 579
           S  Q +  +     L + C+    +A G  S +V+AP+D       M   D     LLPS
Sbjct: 640 SGNQNNMLI-----LQETCT----DASG--SLVVYAPVDVQSMHVVMGGGDSAYVSLLPS 688

Query: 580 GFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLTIAFQF 638
           GF I+P        P              L+  P  ++P A    S ++  S++T+AFQ 
Sbjct: 689 GFAILPDGHTMQAAP--------------LDPSPQGSSPIAHGGGSNNNPGSLVTVAFQI 734

Query: 639 PFESNLQDNVATMARQYVRSVIS-------SVQRVAMAICPSGLSP 677
                L +N+ T A+  V SV +       ++Q++  A+  S +SP
Sbjct: 735 -----LVNNLPT-AKLTVESVDTVSNLLSCTIQKIKSALQASIISP 774


>gi|187611423|sp|Q7Y0V9.2|ROC4_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC4; AltName:
           Full=GLABRA 2-like homeobox protein 4; AltName:
           Full=HD-ZIP protein ROC4; AltName: Full=Homeodomain
           transcription factor ROC4; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 4
          Length = 813

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 14/99 (14%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K  
Sbjct: 107 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 162

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            +R E S L+  N KL +       EN  +++  S  VC
Sbjct: 163 LERHENSLLKQENDKLRS-------ENLSIREATSNAVC 194



 Score = 39.7 bits (91), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 91/230 (39%), Gaps = 37/230 (16%)

Query: 270 LAPARDFWTLRYTTTLDNGSLVVCERSLSG--SGAGPNPASAAQFVRAEMLPSGCLIRPC 327
           L P R+   LR++  L +G   V + S        G   AS+   +    LPSGC+++  
Sbjct: 448 LVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRLPSGCVLQDT 507

Query: 328 DGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA--------QR-----------MTIA 368
             G   +  V+H   +  SV  + RPL  S   +         QR           + + 
Sbjct: 508 PNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLALLMSSIALP 567

Query: 369 ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL---MTCDGAEDVIIAVNS 425
           E     ++  G++   +   ++R++  F   V+  +   WS    +T +  EDV   V +
Sbjct: 568 ENDSSAIHPEGKRS--MLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIGEDV--HVMA 623

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
            KS+     P        G++ + A+ +   V P  L  FL     R+EW
Sbjct: 624 RKSVDEPGTPP-------GVVLSAATSVWMPVMPERLFNFLHNKGLRAEW 666


>gi|162463494|ref|NP_001105493.1| outer cell layer1 [Zea mays]
 gi|5531484|emb|CAB51059.1| OCL1 homeobox protein [Zea mays]
          Length = 784

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L +       ++P+Q+K WFQNRR R K  
Sbjct: 86  RYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL----GLDPRQVKFWFQNRRTRMKTQ 141

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 142 LERHENALLKQENDKLRAENMAIRE 166



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 169/436 (38%), Gaps = 95/436 (21%)

Query: 212 AARACGLVSLEPT-KIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYT 262
           A+R  GLV ++ +  + E L D   W             LE  T   AG+  G + L+  
Sbjct: 351 ASRESGLVIIDNSLALVETLMDVRRWSDMFSCMIAKATVLEEVTSGIAGSRNGALLLMKA 410

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNP--ASAAQFVRAEMLPS 320
           +    + L P R+   LR+   L  G+  V + S+ G     N   AS A  +R   LPS
Sbjct: 411 ELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGNIRCRRLPS 470

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM--------------- 365
           GC+++    G   +  V++   +  SV ++ RPL  S      R                
Sbjct: 471 GCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLAIL 530

Query: 366 ----TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI- 420
               T++     V+   G++   +   ++R++  F   V+  +   WS +  DGA   I 
Sbjct: 531 MSPDTVSANDSSVITQEGKRS--MLKLARRMTENFCAGVSASSAREWSKL--DGAAGSIG 586

Query: 421 --IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADF 476
             + V + KS+     P       G +L A+ S+ +  V P  L  FLR+   R+EW   
Sbjct: 587 EDVRVMARKSVDEPGEPP------GVVLSARTSVWVP-VAPEKLFNFLRDEQLRAEWDIL 639

Query: 477 NVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAF 536
                        S   P          Q         EH   + ++R    S  Q    
Sbjct: 640 -------------SNGGPMQEMANIAKGQ---------EHGNSVSLLRASAMSANQSSML 677

Query: 537 VSRDIHLLQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLD 587
           +     L + C+    +A G  S +V+AP+D    ++  + G      LLPSGF I+   
Sbjct: 678 I-----LQETCT----DASG--SMVVYAPVDIPAMQLVMNGGDSTYVALLPSGFAIL--- 723

Query: 588 SKTPDTPDTLTA-HRT 602
              PD P ++ A H+T
Sbjct: 724 ---PDGPSSVGAEHKT 736


>gi|222629392|gb|EEE61524.1| hypothetical protein OsJ_15826 [Oryza sativa Japonica Group]
          Length = 833

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 14/99 (14%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K  
Sbjct: 107 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 162

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            +R E S L+  N KL +       EN  +++  S  VC
Sbjct: 163 LERHENSLLKQENDKLRS-------ENLSIREATSNAVC 194


>gi|116310008|emb|CAH67034.1| OSIGBa0139P06.7 [Oryza sativa Indica Group]
          Length = 805

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 14/99 (14%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K  
Sbjct: 106 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 161

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            +R E S L+  N KL +       EN  +++  S  VC
Sbjct: 162 LERHENSLLKQENDKLRS-------ENLSIREATSNAVC 193



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 115/297 (38%), Gaps = 46/297 (15%)

Query: 212 AARACGLVSLEP-TKIAEILKDRPSW--------FRDCRSLEVFTMFPAGNAGTIELLYT 262
           A+R  G+V ++    + E L D   W         +   + E+ T       G + L+  
Sbjct: 373 ASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKASTTEEISTGVAGSRNGALLLMQA 432

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG--SGAGPNPASAAQFVRAEMLPS 320
           +    + L P R+   LR++  L +G   V + S        G   AS+   +    LPS
Sbjct: 433 ELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRLPS 492

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA--------QR-------- 364
           GC+++    G   +  V+H   +  SV  + RPL  S   +         QR        
Sbjct: 493 GCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLALL 552

Query: 365 ---MTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL---MTCDGAED 418
              + + E     ++  G++   +   ++R++  F   V+  +   WS    +T +  ED
Sbjct: 553 MSSIALPENDSSAIHPEGKRS--MLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIGED 610

Query: 419 VIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           V   V + KS+     P        G++ + A+ +   V P  L  FL     R+EW
Sbjct: 611 V--HVMARKSVDEPGTPP-------GVVLSAATSVWMPVMPERLFNFLHNKGLRAEW 658


>gi|115459990|ref|NP_001053595.1| Os04g0569100 [Oryza sativa Japonica Group]
 gi|38344373|emb|CAD41424.2| OSJNBb0032E06.7 [Oryza sativa Japonica Group]
 gi|113565166|dbj|BAF15509.1| Os04g0569100 [Oryza sativa Japonica Group]
          Length = 806

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 14/99 (14%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K  
Sbjct: 107 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 162

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            +R E S L+  N KL +       EN  +++  S  VC
Sbjct: 163 LERHENSLLKQENDKLRS-------ENLSIREATSNAVC 194



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 115/297 (38%), Gaps = 46/297 (15%)

Query: 212 AARACGLVSLEP-TKIAEILKDRPSW--------FRDCRSLEVFTMFPAGNAGTIELLYT 262
           A+R  G+V ++    + E L D   W         +   + E+ T       G + L+  
Sbjct: 374 ASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKASTTEEISTGVAGSRNGALLLMQA 433

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG--SGAGPNPASAAQFVRAEMLPS 320
           +    + L P R+   LR++  L +G   V + S        G   AS+   +    LPS
Sbjct: 434 ELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRLPS 493

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA--------QR-------- 364
           GC+++    G   +  V+H   +  SV  + RPL  S   +         QR        
Sbjct: 494 GCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLALL 553

Query: 365 ---MTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL---MTCDGAED 418
              + + E     ++  G++   +   ++R++  F   V+  +   WS    +T +  ED
Sbjct: 554 MSSIALPENDSSAIHPEGKRS--MLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIGED 611

Query: 419 VIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           V   V + KS+     P        G++ + A+ +   V P  L  FL     R+EW
Sbjct: 612 V--HVMARKSVDEPGTPP-------GVVLSAATSVWMPVMPERLFNFLHNKGLRAEW 659


>gi|312282947|dbj|BAJ34339.1| unnamed protein product [Thellungiella halophila]
          Length = 795

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 119/570 (20%), Positives = 209/570 (36%), Gaps = 128/570 (22%)

Query: 6   QQQQQQQRESSSGSINKHQLD------------NGKYVRYTAEQVEALERVYSECPKPSS 53
           ++ ++++ ES SGS N   +               +Y R+T +Q++ LE ++ ECP P  
Sbjct: 99  RRSREEEHESRSGSDNVEGISGEDQDADDKPPRKKRYHRHTPQQIQELESMFKECPHPDE 158

Query: 54  LRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ----------RKEASRLQTVN---- 98
            +R +L  R C     +E +Q+K WFQNRR + K           R+E  +L+  N    
Sbjct: 159 KQRLELSKRLC-----LETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIR 213

Query: 99  ------------------------RKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR 134
                                     L   N  L +E DR+     + +  + +    L 
Sbjct: 214 EAMRNPICTNCGGPAMLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHQHHNSSLE 273

Query: 135 TAPATTDAS--------------CDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 180
            A  T +                           +   +  + LL +A   + E +  A 
Sbjct: 274 LAVGTNNGGDFAFPPDFGGGGGCLPQTQQQQPTGINGIDQRSVLLELALTAMDELVKLAH 333

Query: 181 GTAVDWVQ-MPGMKPG---PDSVGIFAISQSCSGV--AARACGLVSLEPTKIAEILKDRP 234
                WV+ + G +      + +  F+ ++    V  A++  G+V +    + E L D  
Sbjct: 334 SEEPLWVKSLDGERDELNEEEYMRTFSSTKPTGLVTEASKISGMVIINSLALVETLMDSN 393

Query: 235 SWFR--DCRSLEVFT--MFPAGNAGT----IELLYTQAYAPTTLAPARDFWTLRYTTTLD 286
            W     C      T  +   G AGT    ++L+  +    + L P R+   LR+     
Sbjct: 394 RWTEMFPCNVARAATTDVISGGMAGTRNGALQLMNAELQVLSPLVPVRNVNFLRFCKQHA 453

Query: 287 NGSLVVCERSLS----GSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNL 342
            G     + S+      SG  P        V    LPSGC+++    G S +  V+H   
Sbjct: 454 EGVWAAVDVSIDTVRENSGVSP--------VIIRRLPSGCVVQDMSNGYSKVTWVEHAEY 505

Query: 343 EAWSVPEVLRPLYESS----------------KVVAQRMTIAETSGE-VVYGLGRQPAVL 385
           +   +  + RPL  S                 + +A  M+ + TS +      G + ++L
Sbjct: 506 DENQIHHLYRPLIRSGLGFGSQRWVATLQRQCECLAILMSSSVTSPDNTSITPGGRKSML 565

Query: 386 RTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGI 445
           +  +QR++  F   ++  +   WS +T  G  D  + V + KS   +           GI
Sbjct: 566 K-LAQRMTFNFCSGISAPSVHSWSKLTV-GNVDPDVRVMTRKSGEDS-----------GI 612

Query: 446 LCAKASMLLQNVPPALLVRFLREH--RSEW 473
           + + A+ +     P  L  FLR    R EW
Sbjct: 613 ILSAATSVWLPASPQRLFDFLRNERMRCEW 642


>gi|115448457|ref|NP_001048008.1| Os02g0729700 [Oryza sativa Japonica Group]
 gi|75132062|sp|Q6YWR4.1|HOX16_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX16; AltName:
           Full=HD-ZIP protein HOX16; AltName: Full=Homeodomain
           transcription factor HOX16; AltName: Full=OsHox16
 gi|46390454|dbj|BAD15915.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|46390850|dbj|BAD16354.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|113537539|dbj|BAF09922.1| Os02g0729700 [Oryza sativa Japonica Group]
 gi|125583560|gb|EAZ24491.1| hypothetical protein OsJ_08251 [Oryza sativa Japonica Group]
 gi|215767479|dbj|BAG99707.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 343

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 14/126 (11%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 132

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
              ++  RL+     L A +  L+++N RL  QV  L        ++L+    TT+ S  
Sbjct: 133 QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLT-------EKLQEKETTTEGSAG 185

Query: 146 SVVTTP 151
           + V  P
Sbjct: 186 AAVDVP 191


>gi|187471148|sp|A2X980.1|HOX16_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX16; AltName:
           Full=HD-ZIP protein HOX16; AltName: Full=Homeodomain
           transcription factor HOX16; AltName: Full=OsHox16
 gi|125540995|gb|EAY87390.1| hypothetical protein OsI_08797 [Oryza sativa Indica Group]
          Length = 345

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 14/126 (11%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 79  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 134

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
              ++  RL+     L A +  L+++N RL  QV  L        ++L+    TT+ S  
Sbjct: 135 QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLT-------EKLQEKETTTEGSAG 187

Query: 146 SVVTTP 151
           + V  P
Sbjct: 188 AAVDVP 193


>gi|30678803|ref|NP_186976.2| homeobox-leucine zipper protein HDG8 [Arabidopsis thaliana]
 gi|187471152|sp|Q9M9P4.2|HDG8_ARATH RecName: Full=Homeobox-leucine zipper protein HDG8; AltName:
           Full=HD-ZIP protein HDG8; AltName: Full=Homeodomain
           GLABRA 2-like protein 8; AltName: Full=Homeodomain
           transcription factor HDG8; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 8
 gi|332640397|gb|AEE73918.1| homeobox-leucine zipper protein HDG8 [Arabidopsis thaliana]
          Length = 699

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 21/121 (17%)

Query: 27  NGKYV--RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           NGK    R+T +Q++ LE  + ECP P   +R QL RE      +EP QIK WFQN+R +
Sbjct: 22  NGKRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCREL----KLEPDQIKFWFQNKRTQ 77

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC-----------ENGYMKQQL 133
            K +++ S     N  L   N+ L  +N+ +   +  ++C           E G+  Q+L
Sbjct: 78  SKTQEDRS----TNVLLRGENETLQSDNEAMLDALKSVLCPACGGPPFGREERGHNLQKL 133

Query: 134 R 134
           R
Sbjct: 134 R 134


>gi|449454480|ref|XP_004144982.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
 gi|449473159|ref|XP_004153804.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
 gi|449522284|ref|XP_004168157.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 841

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 30/166 (18%)

Query: 4   VIQQQQQQQRESSSGSIN--------KHQLDN----GKYVRYTAEQVEALERVYSECPKP 51
           V ++ ++++ ES SGS N        +   DN     +Y R+T +Q++ LE V+ ECP P
Sbjct: 100 VGRRGREEEHESRSGSDNMDGGSGDDQDAADNPPRKKRYHRHTPQQIQELEAVFKECPHP 159

Query: 52  SSLRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKL 107
              +R +L R  C     +E +Q+K WFQNRR + K   +R E + L+  N KL A N  
Sbjct: 160 DEKQRLELSRRLC-----LETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAEN-- 212

Query: 108 LMEENDRLQKQVSQ------LVCENGYMKQQLRTAPATTDASCDSV 147
            M   D ++  +        ++ E    +QQLR   A      D V
Sbjct: 213 -MSIRDAMRNPICSNCGGPAIIGEISLEEQQLRIENARLKDELDRV 257



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 113/495 (22%), Positives = 190/495 (38%), Gaps = 91/495 (18%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWF--------RDCRSLEVFTMFPAGNAGTIELLYTQ 263
           A+R  G+V +    + E L D   W         R   +  + T       G ++L++ +
Sbjct: 398 ASRESGMVIINSLALVETLMDSNRWAEMFPCMIARTTTTDVISTGMGGTRNGALQLMHAE 457

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R+   LR+      G   V + S+      P     + F     LPSGC+
Sbjct: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDAMRETPT-GGGSSFGNCRRLPSGCV 516

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS-KVVAQR-MTIAETSGEVVYGLGRQ 381
           ++    G S +  V+H   +   V ++ RPL  S     AQR +T  +   E +  L   
Sbjct: 517 VQDMPNGYSKVTWVEHAEYDDSQVHQLYRPLLSSGMGFGAQRWVTTLQRQCECLAILMSS 576

Query: 382 PAVLR--------------TFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
              +R                +QR++  F   V       W+ +   G+ D  + V + K
Sbjct: 577 AVPIRDHTAITAGGRRSMLKLAQRMTANFCAGVCASTVHKWNKLNA-GSVDEDVRVMTRK 635

Query: 428 SLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSAAS 485
           S+     P        GI+ + A+ +   V P  L  FLR+   RSEW   +    +   
Sbjct: 636 SVDDPGEPP-------GIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILS----NGGP 684

Query: 486 LKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQ 545
           ++  ++   G                   +H   + ++R    +  Q    +     L +
Sbjct: 685 MQEMAHIAKGQ------------------DHGNCVSLLRASAMNANQSSMLI-----LQE 721

Query: 546 ICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLDSKTPDTPDT 596
            C  +D     A S +V+AP+D     +  + G      LLPSGF I+P  + T      
Sbjct: 722 TC--ID----AAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGAVT----GG 771

Query: 597 LTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYV 656
           LTA  T   + S   GP +  AAG         S+LT+AFQ    S     +   + + V
Sbjct: 772 LTA--TNGSSPSGGEGPQSQRAAGGG-------SLLTVAFQILVNSLPTAKLTVESVETV 822

Query: 657 RSVIS-SVQRVAMAI 670
            ++IS +VQ++  A+
Sbjct: 823 NNLISCTVQKIKAAL 837


>gi|224118060|ref|XP_002317722.1| predicted protein [Populus trichocarpa]
 gi|222858395|gb|EEE95942.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 18/129 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ LE ++ E P P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 29  RYHRHTAHQIQKLESMFKEFPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 84

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENGYM-KQQLRTAPA 138
            E +     N  L A N  +  EN  +++ +  ++C         E+ Y  +Q+LR   A
Sbjct: 85  HERAD----NSSLRAENDKIRCENIAIREALKNVICPSCGAPPVTEDSYFDEQKLRIENA 140

Query: 139 TTDASCDSV 147
                 D V
Sbjct: 141 QLKEELDRV 149



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 15/140 (10%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRD-------CRSLEVFTMFPAGN-AGTIELLYTQ 263
           ++R  G+V +    + ++  D   W           +++EV +    GN +G+++L+Y +
Sbjct: 280 SSRDSGVVIMNGVALVDMFMDSNKWVESFPTIVSVAKTIEVISSGMLGNHSGSLQLMYEE 339

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R+F  LRY   ++ G   +   S         P  A+QF +   LPSGCL
Sbjct: 340 LQVLSPLVPTREFCILRYCQQIEQGLWAIVSVSYD------IPQFASQF-QCHRLPSGCL 392

Query: 324 IRPCDGGGSIIHIVDHLNLE 343
           I+    G S +  V+H+ +E
Sbjct: 393 IQDMPNGYSKVIWVEHVEIE 412


>gi|31339105|dbj|BAC77159.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 131

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 8/86 (9%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 87
           +Y R T +Q++ LE V+ ECP P   +R +L R      N+E +Q+K WFQNRR + KQ 
Sbjct: 4   RYHRXTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKQT 59

Query: 88  ---RKEASRLQTVNRKLTAMNKLLME 110
              R E + L+  N KL A N  + E
Sbjct: 60  QIERHENALLRQENDKLRAENMTIRE 85


>gi|42562138|ref|NP_564041.2| homeobox-leucine zipper protein HDG12 [Arabidopsis thaliana]
 gi|75264044|sp|Q9LMT8.1|HDG12_ARATH RecName: Full=Homeobox-leucine zipper protein HDG12; AltName:
           Full=HD-ZIP protein HDG12; AltName: Full=Homeodomain
           GLABRA 2-like protein 12; AltName: Full=Homeodomain
           transcription factor HDG12; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 12
 gi|9665069|gb|AAF97271.1|AC034106_14 Strong similarity to meristem L1 layer homeobox protein (ATML1)
           from Arabidopsis thaliana gb|U37589 and contains
           Transposase PF|01527, Homeobox PF|00046, and START
           PF|01852 domains. EST gb|AI995645 comes from this gene
           [Arabidopsis thaliana]
 gi|225897942|dbj|BAH30303.1| hypothetical protein [Arabidopsis thaliana]
 gi|332191531|gb|AEE29652.1| homeobox-leucine zipper protein HDG12 [Arabidopsis thaliana]
          Length = 687

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 24/133 (18%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           ++ R+T  Q++ LE  ++EC  P   +R QL RE      + P+QIK WFQNRR ++K +
Sbjct: 24  RFHRHTPHQIQRLESTFNECQHPDEKQRNQLSREL----GLAPRQIKFWFQNRRTQKKAQ 79

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA--PATTDASCDS 146
            E            A N  L EEND+++       CEN  +++ ++ A  P+  D+  + 
Sbjct: 80  HER-----------ADNCALKEENDKIR-------CENIAIREAIKHAICPSCGDSPVNE 121

Query: 147 VVTTPQHSLRDAN 159
                +  LR  N
Sbjct: 122 DSYFDEQKLRIEN 134



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 62/298 (20%), Positives = 116/298 (38%), Gaps = 62/298 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDR-------PSWFRDCRSLEVFTMFPAGNAG-TIELLYTQ 263
           A+R+ G+V      + ++L +        PS     ++L V +    GN G  + L+  +
Sbjct: 271 ASRSSGVVFTNAITLVDMLMNSVKLTELFPSIVASSKTLAVISSGLRGNHGDALHLMIEE 330

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV---RAEMLPS 320
               + L   R+F  LRY   +++G+  +   S              QF+   R+   PS
Sbjct: 331 LQVLSPLVTTREFCVLRYCQQIEHGTWAIVNVSYE----------FPQFISQSRSYRFPS 380

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGR 380
           GCLI+    G S +  V+H   E         P++E  K +  +         + +G  R
Sbjct: 381 GCLIQDMSNGYSKVTWVEHGEFEEQ------EPIHEMFKDIVHK--------GLAFGAER 426

Query: 381 QPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI-----IAVNSTKSLSTASNP 435
             A L+   +R +     A +   D G  + + +G   ++     +  N   S+ T++N 
Sbjct: 427 WIATLQRMCERFTNLLEPATSSL-DLGGVIPSPEGKRSIMRLAHRMVSNFCLSVGTSNNT 485

Query: 436 TNSLAF------------------LGGILCAKASMLLQNVPPALLVRFLREHRS--EW 473
            +++                     G +LCA  S  L  + P  +  FL++ R+  +W
Sbjct: 486 RSTVVSGLDEFGIRVTSHKSRHEPNGMVLCAATSFWLP-ISPQNVFNFLKDERTRPQW 542


>gi|15209142|gb|AAK91875.1|AC091665_1 Putative homeodomain-leucine zipper protein [Oryza sativa]
          Length = 217

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/38 (71%), Positives = 33/38 (86%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQ 58
           +K  +D+GKYV+YT +QVEALERVY+ECPKPS  RRQQ
Sbjct: 151 DKAGMDSGKYVQYTPDQVEALERVYAECPKPSFCRRQQ 188


>gi|449446049|ref|XP_004140784.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 783

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 21/130 (16%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           KY R+T  Q++ LE  + ECP P   +R +L R       +E KQ+K WFQNRR + K  
Sbjct: 89  KYHRHTPHQIQELEIFFKECPHPDDKQRNELSRRL----GLETKQVKFWFQNRRTQMKTQ 144

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVCENGYMKQ 131
            +R E + L+  N KL A N ++ +                  L  +  QL  EN  +++
Sbjct: 145 IERHENAILKQENDKLRAENSVMKDAISNPTCSTCGGPSIPVHLSFEEHQLRIENARLRE 204

Query: 132 QLRTAPATTD 141
           +L    A T+
Sbjct: 205 ELHRLYAVTN 214



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 96/240 (40%), Gaps = 38/240 (15%)

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           G ++L++ +    + L P R    LR+     +G   V + S+   G G N  S   F  
Sbjct: 401 GALQLMHAELRVLSPLVPVRTLKFLRFCKQHADGLWAVVDVSI---GEGSNSNS---FSG 454

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYES-SKVVAQRM-------- 365
            + LPSGC+++    G S +  V+H   +   + ++ R L  S S   +QR         
Sbjct: 455 CKRLPSGCVVQDMPNGFSKVTWVEHTEYDETVIHQLYRQLISSGSGFGSQRWLATLQRQC 514

Query: 366 ---------TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW-SLMTCDG 415
                    TI       +   GR+  +    SQR+   F   V       W  L+  + 
Sbjct: 515 DCLAILMSSTIPTEDPAGISPSGRRSML--KLSQRMVDNFCSGVCSSTLHKWDKLVVGNI 572

Query: 416 AEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           +EDV   V + KS++    P        GI+ + A+ +   V    L  FL++   RSEW
Sbjct: 573 SEDV--KVMARKSINDPGEPP-------GIVLSAATSVWMPVTQQRLFAFLQDECLRSEW 623


>gi|449485525|ref|XP_004157198.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 783

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 21/130 (16%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           KY R+T  Q++ LE  + ECP P   +R +L R       +E KQ+K WFQNRR + K  
Sbjct: 89  KYHRHTPHQIQELEIFFKECPHPDDKQRNELSRRL----GLETKQVKFWFQNRRTQMKTQ 144

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEEND--------------RLQKQVSQLVCENGYMKQ 131
            +R E + L+  N KL A N ++ +                  L  +  QL  EN  +++
Sbjct: 145 IERHENAILKQENDKLRAENSVMKDAISNPTCSTCGGPSIPVHLSFEEHQLRIENARLRE 204

Query: 132 QLRTAPATTD 141
           +L    A T+
Sbjct: 205 ELHRLYAVTN 214



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 96/240 (40%), Gaps = 38/240 (15%)

Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVR 314
           G ++L++ +    + L P R    LR+     +G   V + S+   G G N  S   F  
Sbjct: 401 GALQLMHAELRVLSPLVPVRTLKFLRFCKQHADGLWAVVDVSI---GEGSNSNS---FSG 454

Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYES-SKVVAQRM-------- 365
            + LPSGC+++    G S +  V+H   +   + ++ R L  S S   +QR         
Sbjct: 455 CKRLPSGCVVQDMPNGFSKVTWVEHTEYDETVIHQLYRQLISSGSGFGSQRWLATLQRQC 514

Query: 366 ---------TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW-SLMTCDG 415
                    TI       +   GR+  +    SQR+   F   V       W  L+  + 
Sbjct: 515 DCLAILMSSTIPTEDPAGISPSGRRSML--KLSQRMVDNFCSGVCSSTLHKWDKLVVGNI 572

Query: 416 AEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           +EDV   V + KS++    P        GI+ + A+ +   V    L  FL++   RSEW
Sbjct: 573 SEDV--KVMARKSINDPGEPP-------GIVLSAATSVWMPVTQQRLFAFLQDECLRSEW 623


>gi|242056677|ref|XP_002457484.1| hypothetical protein SORBIDRAFT_03g008090 [Sorghum bicolor]
 gi|241929459|gb|EES02604.1| hypothetical protein SORBIDRAFT_03g008090 [Sorghum bicolor]
          Length = 815

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 30/162 (18%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T +Q++ LE ++ ECP P   +R +L +       ++P+Q+K WFQNRR + K +
Sbjct: 109 RYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL----GLDPRQVKFWFQNRRTQMKTQ 164

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
            E              N LL +END+L+        EN  +++ +R+       SC S  
Sbjct: 165 LERHE-----------NALLKQENDKLR-------AENMAIREAMRSPMC---GSCGSPA 203

Query: 149 TTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMP 190
              + SL + +     L I    L + LS+    A  ++  P
Sbjct: 204 MLGEVSLEEQH-----LCIENARLKDELSRVYALATKFLGKP 240



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 115/505 (22%), Positives = 191/505 (37%), Gaps = 121/505 (23%)

Query: 212 AARACGLVSLEPT-KIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYT 262
           A+R  GLV  + +  + E L D   W             LE  T   AG+  G + L+  
Sbjct: 382 ASRESGLVIFDNSLALVETLMDERRWSDMFSCMIAKATVLEEVTSGIAGSRNGGLLLMKA 441

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA--AQFVRAEMLPS 320
           +    + L P R+   LR+   L  G+  V + S+ G     N A+A  A  +R   LPS
Sbjct: 442 ELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDQNSATASNAGNIRCRRLPS 501

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM--------------- 365
           GC+++    G   +  V+H   +  SV ++ RPL  S      R                
Sbjct: 502 GCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLAMLQRQCECLAIL 561

Query: 366 ----TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI- 420
               T++     V+   G++  +    ++R++  F   V+  +   WS +  DGA   I 
Sbjct: 562 MSPDTVSANDSSVITQEGKRSML--KLARRMTENFCAGVSASSAREWSKL--DGAAGSIG 617

Query: 421 --IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADF 476
             + V + KS+     P        G++ + A+ +   V P  L  FLR+   R+EW   
Sbjct: 618 EDVRVMARKSVDEPGEPP-------GVVLSAATSVWVPVAPEKLFNFLRDEQLRAEWDIL 670

Query: 477 NVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAF 536
                        S   P          Q         EH   + ++R    S  Q    
Sbjct: 671 -------------SNGGPMQEMANIAKGQ---------EHGNSVSLLRASAMSANQSSML 708

Query: 537 VSRDIHLLQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLD 587
           +     L + C+    +A G  S +V+AP+D    ++  + G      LLPSGF I+   
Sbjct: 709 I-----LQETCT----DASG--SMVVYAPVDIPAMQLVMNGGDSTYVALLPSGFAIL--- 754

Query: 588 SKTPDTPDTLTA-HRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQD 646
              PD P  + A H+T                           S+LT+AFQ    S    
Sbjct: 755 ---PDGPSGVGAEHKT-------------------------GGSLLTVAFQILVNSQPTA 786

Query: 647 NVATMARQYVRSVIS-SVQRVAMAI 670
            +   + + V ++IS +++++  A+
Sbjct: 787 KLTVESVETVNNLISCTIKKIKTAL 811


>gi|67966273|emb|CAG38614.1| homeobox protein OCL1 [Zea mays]
          Length = 803

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L +       ++P+Q+K WFQNRR + K  
Sbjct: 105 RYHRHTPQQIQELEALFKECPHPDEKQRDELSKRL----GLDPRQVKFWFQNRRTQMKTQ 160

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 161 LERHENALLKQENDKLRAENMAIRE 185



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 168/436 (38%), Gaps = 95/436 (21%)

Query: 212 AARACGLVSLEPT-KIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYT 262
           A+R  GLV ++ +  + E L D   W             LE  T   AG+  G + L+  
Sbjct: 370 ASRESGLVIIDNSLALVETLMDVRRWSDMFSCMIAKATVLEEVTSGIAGSRNGALLLMKA 429

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNP--ASAAQFVRAEMLPS 320
           +    + L P R+   LR+   L  G+  V + S+ G     N   AS A  +R   LPS
Sbjct: 430 ELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGNIRCRRLPS 489

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM--------------- 365
           GC+++    G   +  V++   +  SV ++ RPL  S      R                
Sbjct: 490 GCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLAIL 549

Query: 366 ----TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI- 420
               T++     V+   G++   +   ++R++  F   V+  +   WS +  DGA   I 
Sbjct: 550 MSPDTVSANDSSVITQEGKRS--MLKLARRMTENFCAGVSASSAREWSKL--DGAAGSIG 605

Query: 421 --IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADF 476
             + V + KS+     P       G +L A  S+ +  V P  L  FLR+   R+EW   
Sbjct: 606 EDVRVMARKSVDEPGEPP------GVVLSAPTSVWVP-VAPEKLFNFLRDEQLRAEWDIL 658

Query: 477 NVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAF 536
                        S   P          Q         EH   + ++R    S  Q    
Sbjct: 659 -------------SNGGPMQEMANIAKGQ---------EHGNSVSLLRASAMSANQSSML 696

Query: 537 VSRDIHLLQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLD 587
           +     L + C+    +A G  S +V+AP+D    ++  + G      LLPSGF I+   
Sbjct: 697 I-----LQETCT----DASG--SMVVYAPVDIPAMQLVMNGGDSTYVALLPSGFAIL--- 742

Query: 588 SKTPDTPDTLTA-HRT 602
              PD P ++ A H+T
Sbjct: 743 ---PDGPSSVGAEHKT 755


>gi|75315198|sp|Q9XH36.1|HOX5_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX5; AltName:
           Full=HD-ZIP protein HOX5; AltName: Full=Homeodomain
           transcription factor HOX5; AltName: Full=OsHox5
 gi|5006855|gb|AAD37698.1|AF145729_1 homeodomain leucine zipper protein [Oryza sativa Indica Group]
 gi|125561547|gb|EAZ06995.1| hypothetical protein OsI_29241 [Oryza sativa Indica Group]
          Length = 350

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R TAEQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 86  KKRRLTAEQVQMLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 141

Query: 89  K---EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
           +   +  RL+     L A +  L+ +NDRL+ QV  L 
Sbjct: 142 QLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLT 179


>gi|115476422|ref|NP_001061807.1| Os08g0416000 [Oryza sativa Japonica Group]
 gi|75134805|sp|Q6ZA74.1|HOX5_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX5; AltName:
           Full=HD-ZIP protein HOX5; AltName: Full=Homeodomain
           transcription factor HOX5; AltName: Full=OsHox5
 gi|37573050|dbj|BAC98578.1| homeodomain leucine zipper protein [Oryza sativa Japonica Group]
 gi|113623776|dbj|BAF23721.1| Os08g0416000 [Oryza sativa Japonica Group]
 gi|125603415|gb|EAZ42740.1| hypothetical protein OsJ_27319 [Oryza sativa Japonica Group]
          Length = 349

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R TAEQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 86  KKRRLTAEQVQMLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 141

Query: 89  K---EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
           +   +  RL+     L A +  L+ +NDRL+ QV  L 
Sbjct: 142 QLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLT 179


>gi|356505007|ref|XP_003521284.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 835

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 113/501 (22%), Positives = 192/501 (38%), Gaps = 102/501 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R  G+V +    + E L D   W            + EV +    G   G ++L++ +
Sbjct: 391 ASRENGMVIINSLALVETLMDSNRWAEMFPCIIARTSTTEVISSGINGTRNGALQLMHAE 450

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R+   LR+      G   V + S+    +    + A  FV    LPSGC+
Sbjct: 451 LQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSID---SIRESSGAPTFVNGRRLPSGCV 507

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS-KVVAQR---------------MTI 367
           ++    G S +  V+H   E   V ++ RPL  S     AQR               M+ 
Sbjct: 508 VQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILMSS 567

Query: 368 AETSGE--VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
           A  S +   +   GR+  V    +QR++  F   V       W+ +      D  + V +
Sbjct: 568 AAPSRDHSAITAGGRRSMV--KLAQRMTNNFCAGVCASTVHKWNKLNAAANVDEDVRVMT 625

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS+     P        GI+ + A+ +   V P  L  FLR+   RSEW   +    + 
Sbjct: 626 RKSVDDPGEPP-------GIVLSAATSVWLPVSPHRLFDFLRDERLRSEWDILS----NG 674

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
             ++  ++   G                   +H   + ++R    +  Q    +     L
Sbjct: 675 GPMQEMAHIAKGQ------------------DHGNAVSLLRASAINSNQSSMLI-----L 711

Query: 544 LQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLDSKTPDTP 594
            + C  +D     A S +V+AP+D     +  + G      LLPSGF I+      PD P
Sbjct: 712 QETC--ID----AAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIV------PDGP 759

Query: 595 DTLTAHRTLDLTSSLEVGPATNPA----AGDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
            +   H+          GP ++       GD+     + S+LT+AFQ    S     +  
Sbjct: 760 GSRGPHQN---------GPTSSTTTTTNGGDNGVTRVSGSLLTVAFQILVNSLPTAKLTV 810

Query: 651 MARQYVRSVIS-SVQRVAMAI 670
            + + V ++IS +VQ++  A+
Sbjct: 811 ESVETVNNLISCTVQKIKAAL 831



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 27/120 (22%)

Query: 5   IQQQQQQQRESSSGSINKHQLDNG---------------KYVRYTAEQVEALERVYSECP 49
           +++ ++ + ES SGS N   +D G               +Y R+T +Q++ LE ++ ECP
Sbjct: 99  LRRSREDEHESRSGSDN---MDGGSGDEHDAADNPPRKKRYHRHTPQQIQELEALFKECP 155

Query: 50  KPSSLRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMN 105
            P   +R +L R  C     +E +Q+K WFQNRR + K   +R E + L+  N KL A N
Sbjct: 156 HPDEKQRLELSRRLC-----LETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAEN 210


>gi|357147780|ref|XP_003574482.1| PREDICTED: homeobox-leucine zipper protein HOX5-like [Brachypodium
           distachyon]
          Length = 276

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R TAEQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 76  KKRRLTAEQVQMLERSFGEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKNK 131

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
              ++  RL+     L A +  L+ +NDRL+ QV  L 
Sbjct: 132 QLEQDFDRLKAAYDALAADHHGLLSDNDRLRAQVISLT 169


>gi|359489358|ref|XP_002272264.2| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Vitis
           vinifera]
          Length = 811

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 26/136 (19%)

Query: 6   QQQQQQQRESSSGSIN--------KHQLDN----GKYVRYTAEQVEALERVYSECPKPSS 53
           ++ ++ + ES SGS N        +   DN     +Y R+T +Q++ LE ++ ECP P  
Sbjct: 80  RRSREDEHESRSGSDNMDGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDE 139

Query: 54  LRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLME 110
            +R +L R      ++E +Q+K WFQNRR + K   +R E S L+  N KL A       
Sbjct: 140 KQRLELSRRL----SLETRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRA------- 188

Query: 111 ENDRLQKQVSQLVCEN 126
           EN  ++  +   +C N
Sbjct: 189 ENMSIRDAMRNPICTN 204



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 111/497 (22%), Positives = 190/497 (38%), Gaps = 103/497 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW--FRDCRSLEVFT--MFPAGNAGT----IELLYTQ 263
           + R  G+V +    + E L D   W     C      T  +  +G  GT    ++L++ +
Sbjct: 376 STRETGMVIINSLALVETLMDSNRWAEMFPCMIARTSTTDVISSGMGGTRNGALQLMHAE 435

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R+   LR+      G   V + S+         + A  FV    LPSGC+
Sbjct: 436 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSVAPTFVNCRRLPSGCV 492

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS-KVVAQRM----------------- 365
           ++    G S +  V+H   +  +V ++ RPL  S     AQR                  
Sbjct: 493 VQDMPNGYSKVTWVEHAEYDESAVHQLYRPLLGSGMGFGAQRWVATLQRQCECLAILMSS 552

Query: 366 TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
           T+           G + ++L+  +QR++  F   V       W+ + C G  D  + V +
Sbjct: 553 TVPTRDHTAAITAGGRRSMLK-LAQRMTDNFCAGVCASTVHKWNKL-CAGNVDEDVRVMT 610

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS+     P        GI+ + A+ +   V P  L  FLR+   RSEW   +    + 
Sbjct: 611 RKSVDDPGEPP-------GIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILS----NG 659

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
             ++  ++   G                   +H   + ++R    +  Q    +     L
Sbjct: 660 GPMQEMAHIAKGQ------------------DHGNCVSLLRASAMNANQSSMLI-----L 696

Query: 544 LQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLDSKTPDTP 594
            + C  +D     A S +V+AP+D     +  + G      LLPSGF I+      PD P
Sbjct: 697 QETC--ID----AAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIV------PDGP 744

Query: 595 DTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
            +   +  +   S    GP  N  +G         S+LT+AFQ    S     +   + +
Sbjct: 745 GSRGPNSGVHTNSG---GP--NRVSG---------SLLTVAFQILVNSLPTAKLTVESVE 790

Query: 655 YVRSVIS-SVQRVAMAI 670
            V ++IS +VQ++  A+
Sbjct: 791 TVNNLISCTVQKIKAAL 807


>gi|77378038|gb|ABA70760.1| baby boom interacting protein 2 [Brassica napus]
          Length = 697

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+TA+Q++ LE V+ EC  P   +R  L R+     N++P+Q+K WFQNRR + K  
Sbjct: 15  RYHRHTAKQIQDLESVFKECAHPDEKQRLDLSRKL----NLDPRQVKFWFQNRRTQMKTQ 70

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 71  IERHENALLRQENDKLRAENMSVRE 95



 Score = 40.4 bits (93), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 86/410 (20%), Positives = 151/410 (36%), Gaps = 84/410 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFT----MFPAGNAGT----IELLYTQ 263
           A++  G V +    + E L D   W     S+   T    +  +G  GT    + L++ +
Sbjct: 267 ASKETGNVIINSLALVETLMDSERWAEMFPSMISRTSTTEIISSGMGGTRNGALHLMHAE 326

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R    LR+      G   V + S+     G + +          LPSGCL
Sbjct: 327 LQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS-------CRRLPSGCL 379

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVV-AQR-MTIAETSGEVVYGL--- 378
           ++    G S +  ++H   +   +  + RPL        AQR M   +   E +  L   
Sbjct: 380 VQDMANGYSKVTWIEHTEYDETRIHRLYRPLLSCGLAFGAQRWMAALQRQCECLTILMSS 439

Query: 379 ----GRQPA--------VLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNST 426
                R P          +   ++R++  F   V   +   WS +   G  D  + + + 
Sbjct: 440 TVSPSRSPTPISCNGRKSMLKLAKRMTDNFCGGVCASSLQKWSKLNV-GNVDEDVRIMTR 498

Query: 427 KSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSAA 484
           KS++    P        GI+   A+ +   V P  L  FL     RSEW   +    +  
Sbjct: 499 KSVNDPGEPP-------GIVLNAATSVWMPVSPKRLFDFLGNERLRSEWDILS----NGG 547

Query: 485 SLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLL 544
            ++  ++                +  GH  +H   + ++R    +  Q    + ++  + 
Sbjct: 548 PMQEMAH----------------IAKGH--DHSNSVSLLRATAINANQSSMLILQETSI- 588

Query: 545 QICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIP 585
                   +AVGA   +V+AP+D    +   + G      LLPSGF I+P
Sbjct: 589 --------DAVGAV--VVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILP 628


>gi|356536039|ref|XP_003536548.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 751

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 18/129 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           ++ R+T  Q+  +E  + ECP P   +R+ L RE  ++    P QIK WFQN+R + K +
Sbjct: 77  RHTRHTLHQISEMEAFFKECPHPDEKQRKALGRELGLV----PLQIKFWFQNKRTQVKSQ 132

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN----------GYMKQQLRTAPA 138
           +E    +  N  L   N  L  EN R +  +S   C N           + +QQLR   A
Sbjct: 133 QE----RYENNLLRVENDKLRAENSRYRNALSNTSCPNCGAPTTLGEMSFDEQQLRMENA 188

Query: 139 TTDASCDSV 147
                 DS+
Sbjct: 189 RQKEEIDSM 197



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 88/413 (21%), Positives = 158/413 (38%), Gaps = 92/413 (22%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFP-AGNAGTIELLYTQ 263
           ++R   +V +   K+ E+L D   W            + EV ++   A   G  +++  +
Sbjct: 324 SSRQTAIVMMHHMKLVEMLMDVNQWSNMFCGIVSRAVTHEVLSIGDHARYDGAYQVMSAE 383

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P RD + +R++      S  V + S+     G          R    PSGC+
Sbjct: 384 FQVPSPLVPTRDNYFIRFSKKHAGQSWAVVDISMDHLRPGA-------VTRTRRRPSGCI 436

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPA 383
           I+    G S +  V+H+ ++   V  + + L  S+     +  IA       + L R  A
Sbjct: 437 IQELPNGYSKVIWVEHVEVDDIEVHNLYKNLVNSTLAFGAKRWIAAIERTCEH-LARAMA 495

Query: 384 V------------------LRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
                              +   ++R+   F+  V     + W+ +  D  E+V   V +
Sbjct: 496 TNIPQGALCVITSHEGRKSMMKLAERMVLSFSTGVGASTANAWTPLPLD-LENV--RVMT 552

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS+     P+       GI+ + A+ L   VP   +  FLR    R++W     D  S 
Sbjct: 553 RKSVDDPGRPS-------GIVLSAATSLWLPVPARRVFDFLRSENTRNQW-----DILS- 599

Query: 484 ASLKAGSYAYPGMRPTRFTGSQI--IMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
                             +G+Q+  +  +    +H   + ++R+   ++AQ +  +    
Sbjct: 600 ------------------SGAQVNELAHIAKGRDHGNSVSLLRVNTQNVAQNNMLI---- 637

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
            L + C     +A G  S +V+APID            PD   LLPSGF ++P
Sbjct: 638 -LQESCI----DATG--SFVVYAPIDLASMNLVLGGGNPDYVALLPSGFAVLP 683


>gi|345195182|tpg|DAA34956.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413917511|gb|AFW57443.1| putative homeobox/lipid-binding domain family protein isoform 1
           [Zea mays]
 gi|413917512|gb|AFW57444.1| putative homeobox/lipid-binding domain family protein isoform 2
           [Zea mays]
          Length = 769

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 8/96 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + E P P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 82  RYHRHTQHQIQELEAFFKEYPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 137

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
           +E       N +L A N+ L  EN R +  ++   C
Sbjct: 138 QERHE----NMQLRAENEKLRAENARYKDALANASC 169



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 100/418 (23%), Positives = 160/418 (38%), Gaps = 90/418 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQ 263
           A+R   +V +    + E+L D   W            +LEV +   AGN  G ++L+  +
Sbjct: 330 ASREAVVVIMNHVSLIEMLMDVNQWSTLFSSIVSRAATLEVLSTGVAGNYNGALQLMTAE 389

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+   LRY     +GS  V + S+ G        S     R    PSGCL
Sbjct: 390 FQMPSPLVPTRECQFLRYCKQHTDGSWAVVDVSVEGQLL--RTGSRQGRGRGRRRPSGCL 447

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM---TIAETSGEVVYGL-- 378
           I+    G S +  V+H   +   V ++ RPL  S      R    T+      +   +  
Sbjct: 448 IQEMPNGYSRVTWVEHAEADDMMVHDLYRPLVCSGLAFGARRWASTLERQCERLASAMAS 507

Query: 379 --------------------GRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAED 418
                               GR+ +++R  ++R+   F   V       W+ ++  GAED
Sbjct: 508 GVVVPAAAAGPAAGVVTSPEGRR-SMMR-LAERMVASFCGGVTASTTHQWTTLSGSGAED 565

Query: 419 VIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADF 476
           V   V + KS+     P        GI+   A+     V PA +  FLR+   RSEW   
Sbjct: 566 V--RVMTRKSVDDPGRPP-------GIILNAATSFWLPVAPARVFGFLRDDATRSEW--- 613

Query: 477 NVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAF 536
             D  S                      Q +  + +  +H   + ++R++  +  Q +  
Sbjct: 614 --DMLSNGG-----------------DVQEMAHIANGRDHGNAVSLLRVDNANSNQGNML 654

Query: 537 VSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
           +      LQ C     +A G  S +++AP+D +          PD   LLPSGF I+P
Sbjct: 655 I------LQECC---TDATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 701


>gi|53792431|dbj|BAD53269.1| putative transcription factor 1 [Oryza sativa Japonica Group]
 gi|56784273|dbj|BAD81955.1| putative transcription factor 1 [Oryza sativa Japonica Group]
          Length = 629

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 103/494 (20%), Positives = 188/494 (38%), Gaps = 95/494 (19%)

Query: 41  LERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--KEASRLQTVN 98
           + R +S C  P   +++ L       + +   Q+K WFQN+R + K    KE       N
Sbjct: 1   MNRFFSICGHPDDGQKRHLSET----TGLGLDQVKFWFQNKRTQVKTMCWKEE------N 50

Query: 99  RKLTAMNKLLMEENDR---------------------LQKQVSQLVCENGYMKQQLRTAP 137
            KL+  N++L +EN R                     L  ++ +L+ ++ +++Q++  + 
Sbjct: 51  YKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQEIARSN 110

Query: 138 ATTDAS--CDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK-- 193
            T  A+     + ++  +     ++   +  +A+  +   +  A      W  +PG    
Sbjct: 111 GTPPAANLAFQLNSSADYVFSGQHDQQMIAELAKNAMHALIILAESHVALWFPVPGCSYE 170

Query: 194 -----------PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKD-------RPS 235
                      PG +S             A RA  +V ++   + + L D        P 
Sbjct: 171 VLNKMAYDQAYPGDNSANAIGFKTE----ATRAVSMVMMDYKSVVDFLMDPYNYRTFFPE 226

Query: 236 WFRDCRSLEVFTMFPA--GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVC 293
                 +  ++T +P   G  G I+L+  +   P+ L PAR    LRY   L+ G +VV 
Sbjct: 227 VISGAVTNRIYT-WPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVI 285

Query: 294 ERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRP 353
           + SL            + F +   +PSG LI+        +  ++H+  +   V E+ +P
Sbjct: 286 DVSLD---------DGSIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQP 336

Query: 354 LYESSKVVAQRM--TIAETSGEV--VYGLGRQPAVLRTFSQRLSRGFNDAVNGF------ 403
                   A+R   T+A  S  +  V+     P V     + L +  +D +  F      
Sbjct: 337 CMNGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTKGRKNLMKLADDLLASFAGGIAA 396

Query: 404 -NDDGWSLMTCDGAE-DVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPAL 461
                W+++   G E D+ +A   T   S++ N          IL   AS+ L  +P   
Sbjct: 397 TGGGTWTVVIGAGTEKDIRVAYRRTTEGSSSYN---------AILSVTASLRLP-LPMRK 446

Query: 462 LVRFLRE--HRSEW 473
               LR   HR +W
Sbjct: 447 TFDLLRNLTHRCKW 460


>gi|224130112|ref|XP_002320755.1| predicted protein [Populus trichocarpa]
 gi|222861528|gb|EEE99070.1| predicted protein [Populus trichocarpa]
          Length = 823

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 21/118 (17%)

Query: 4   VIQQQQQQQRESSSGSIN--------KHQLDN----GKYVRYTAEQVEALERVYSECPKP 51
           V ++ ++++ ES SGS N        +   DN     +Y R+T +Q++ LE ++ ECP P
Sbjct: 81  VGRRSREEEHESRSGSDNMDGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHP 140

Query: 52  SSLRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMN 105
              +R +L R  C     +E +Q+K WFQNRR + K   +R E S L+  N KL A N
Sbjct: 141 DEKQRLELSRRLC-----LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 193



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 106/501 (21%), Positives = 183/501 (36%), Gaps = 104/501 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWF--------RDCRSLEVFTMFPAGNAGTIELLYTQ 263
           A+R  G+V +    + E L D   W         R   +  +         G+++L++ +
Sbjct: 381 ASRETGMVIINSLALVETLMDSNRWAEMFPCVIARTSTTDVIANGMGGTRNGSLQLMHAE 440

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG----SGAGPNPASAAQFVRAEMLP 319
               + L P R+   LR+      G   V + S+      SGA P       FV    LP
Sbjct: 441 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDTIRETSGASPT------FVNCRRLP 494

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGE------ 373
           SGC+++    G S +  ++H   +     ++ RPL  S      +  IA    +      
Sbjct: 495 SGCVVQDMPNGYSKVTWIEHAEYDESQTHQLYRPLISSGMGFGAQRWIATLQRQSECLAI 554

Query: 374 ------------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVII 421
                        +   GR+  +    +QR++  F   V       W+ +   G  D  +
Sbjct: 555 LMSSNVPSRDHTAITASGRRSML--KLAQRMTANFCAGVCASTVHKWNKLNA-GNVDEDV 611

Query: 422 AVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVD 479
            V + KS+     P        GI+ + A+ +   V P  L  FLR+   RSEW   +  
Sbjct: 612 RVMTRKSVDDPGEPP-------GIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILS-- 662

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
             +   ++  ++   G                   +H   + ++R    +  Q    +  
Sbjct: 663 --NGGPMQEMAHIAKGQ------------------DHGNCVSLLRASAMNANQSSMLI-- 700

Query: 540 DIHLLQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLDSKT 590
              L + C  +D     A S +V+AP+D     +  + G      LLPSGF I+P D   
Sbjct: 701 ---LQETC--ID----AAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP-DGPG 750

Query: 591 PDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
              P T               GP  N  +        + S+LT+AFQ    S     +  
Sbjct: 751 SRGPPTTNG------------GPTANNNSNGGGPERVSGSLLTVAFQILVNSLPTAKLTV 798

Query: 651 MARQYVRSVIS-SVQRVAMAI 670
            + + V ++IS +VQ++  A+
Sbjct: 799 ESVETVNNLISCTVQKIKAAL 819


>gi|115481134|ref|NP_001064160.1| Os10g0147300 [Oryza sativa Japonica Group]
 gi|113638769|dbj|BAF26074.1| Os10g0147300 [Oryza sativa Japonica Group]
          Length = 108

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/38 (71%), Positives = 33/38 (86%)

Query: 21 NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQ 58
          +K  +D+GKYV+YT +QVEALERVY+ECPKPS  RRQQ
Sbjct: 42 DKAGMDSGKYVQYTPDQVEALERVYAECPKPSFCRRQQ 79


>gi|147811086|emb|CAN61351.1| hypothetical protein VITISV_023503 [Vitis vinifera]
          Length = 784

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 19/115 (16%)

Query: 6   QQQQQQQRESSSGSIN--------KHQLDN----GKYVRYTAEQVEALERVYSECPKPSS 53
           ++ ++ + ES SGS N        +   DN     +Y R+T +Q++ LE ++ ECP P  
Sbjct: 53  RRSREDEHESRSGSDNMDGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDE 112

Query: 54  LRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMN 105
            +R +L R      ++E +Q+K WFQNRR + K   +R E S L+  N KL A N
Sbjct: 113 KQRLELSRRL----SLETRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRAEN 163



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 108/497 (21%), Positives = 186/497 (37%), Gaps = 103/497 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW--FRDCRSLEVFT--MFPAGNAGT----IELLYTQ 263
           + R  G+V +    + E L D   W     C      T  +  +G  GT    ++L++ +
Sbjct: 349 STRETGMVIINSLALVETLMDSNRWAEMFPCMIARTSTTDVISSGMGGTRNGALQLMHAE 408

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R+   LR+      G   V + S+         + A  FV    LPSGC+
Sbjct: 409 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSVAPTFVNCRRLPSGCV 465

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS-KVVAQRM----------------- 365
           ++    G S +  V+H   +  +V ++ RPL  S     AQR                  
Sbjct: 466 VQDMPNGYSKVTWVEHAEYDESAVHQLYRPLLGSGMGFGAQRWVATLQRQCECLAILMSS 525

Query: 366 TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
           T+           G + ++L+  +QR++  F   V       W+ + C G  D  + V +
Sbjct: 526 TVPTRDHTAAITAGGRRSMLK-LAQRMTDNFCAGVCASTVHKWNKL-CAGNVDEDVRVMT 583

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS+     P        GI+ + A+ +   V P  L  FLR+   RSEW   +    + 
Sbjct: 584 RKSVDDPGEPP-------GIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILS----NG 632

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
             ++  ++   G                   +H   + ++R    +  Q    +     L
Sbjct: 633 GPMQEMAHIAKGQ------------------DHGNCVSLLRASAMNANQSSMLI-----L 669

Query: 544 LQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLDSKTPDTP 594
            + C  +D     A S +V+AP+D     +  + G      LLPSGF I+      PD P
Sbjct: 670 QETC--ID----AAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIV------PDGP 717

Query: 595 DTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
            +               GP +            + S+LT+AFQ    S     +   + +
Sbjct: 718 GSR--------------GPNSGXHTNSGGPNRVSGSLLTVAFQILVNSLPTAKLTVESVE 763

Query: 655 YVRSVIS-SVQRVAMAI 670
            V ++IS +VQ++  A+
Sbjct: 764 TVNNLISCTVQKIKAAL 780


>gi|356520461|ref|XP_003528880.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 829

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 108/497 (21%), Positives = 190/497 (38%), Gaps = 100/497 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R  G+V +    + E L D   W            + EV +    G   G ++L++ +
Sbjct: 391 ASRENGMVIINSLALVETLMDSNRWAEMFPCIIARTSTTEVISSGINGTRNGALQLMHAE 450

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R+   LR+      G   V + S+    +    + A  FV    LPSGC+
Sbjct: 451 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---SIRESSGAPTFVNCRRLPSGCV 507

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS----------------KVVAQRMTI 367
           ++    G S +  V+H   +   V ++ RPL  S                 + +A  M+ 
Sbjct: 508 VQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILMSS 567

Query: 368 AETSGE--VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
           A  S +   +   GR+   +   +QR++  F   V       W+ +   G  D  + V +
Sbjct: 568 AAPSRDHSAITAGGRRS--MMKLAQRMTNNFCAGVCASTVHKWNKLNA-GNVDEDVRVMT 624

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS+     P        GI+ + A+ +   V P  L  FLR+   RSEW   +    + 
Sbjct: 625 RKSVDDPGEPP-------GIVLSAATSVWLPVSPHRLFDFLRDERLRSEWDILS----NG 673

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
             ++  ++   G                   +H   + ++R    +  Q    +     L
Sbjct: 674 GPMQEMAHIAKGQ------------------DHGNAVSLLRASAINSNQSSMLI-----L 710

Query: 544 LQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLDSKTPDTP 594
            + C  +D     A S +V+AP+D     +  + G      LLPSGF I+P    +   P
Sbjct: 711 QETC--ID----AAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGPP 764

Query: 595 DTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
           +                GP +    GD+     + S+LT+AFQ    S     +   + +
Sbjct: 765 N----------------GPTSTTNGGDNGVTRVSGSLLTVAFQILVNSLPTAKLTVESVE 808

Query: 655 YVRSVIS-SVQRVAMAI 670
            V ++IS +VQ++  A+
Sbjct: 809 TVNNLISCTVQKIKAAL 825



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 21/117 (17%)

Query: 5   IQQQQQQQRESSSGSIN-------KHQL-DN----GKYVRYTAEQVEALERVYSECPKPS 52
           +++ ++ + ES SGS N       +H   DN     +Y R+T +Q++ LE ++ ECP P 
Sbjct: 96  LRRSREDEHESRSGSDNMDGASGDEHDAADNPPRKKRYHRHTPQQIQELEALFKECPHPD 155

Query: 53  SLRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMN 105
             +R +L R  C     +E +Q+K WFQNRR + K   +R E + L+  N KL A N
Sbjct: 156 EKQRLELSRRLC-----LETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAEN 207


>gi|223950133|gb|ACN29150.1| unknown [Zea mays]
 gi|345193169|tpg|DAA34950.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414876613|tpg|DAA53744.1| TPA: outer cell layer1 [Zea mays]
          Length = 803

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L +       ++P+Q+K WFQNRR + K  
Sbjct: 105 RYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL----GLDPRQVKFWFQNRRTQMKTQ 160

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 161 LERHENALLKQENDKLRAENMAIRE 185



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 168/436 (38%), Gaps = 95/436 (21%)

Query: 212 AARACGLVSLEPT-KIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYT 262
           A+R  GLV ++ +  + E L D   W             LE  T   AG+  G + L+  
Sbjct: 370 ASRESGLVIIDNSLALVETLMDVRRWSDMFSCMIAKATVLEEVTSGIAGSRNGALLLMKA 429

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNP--ASAAQFVRAEMLPS 320
           +    + L P R+   LR+   L  G+  V + S+ G     N   AS A  +R   LPS
Sbjct: 430 ELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGNIRCRRLPS 489

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM--------------- 365
           GC+++    G   +  V++   +  SV ++ RPL  S      R                
Sbjct: 490 GCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLAIL 549

Query: 366 ----TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI- 420
               T++     V+   G++   +   ++R++  F   V+  +   WS +  DGA   I 
Sbjct: 550 MSPDTVSANDSSVITQEGKRS--MLKLARRMTENFCAGVSASSAREWSKL--DGAAGSIG 605

Query: 421 --IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADF 476
             + V + KS+     P        G++ + A+ +   V P  L  FLR+   R+EW   
Sbjct: 606 EDVRVMARKSVDEPGEPP-------GVVLSAATSVWVPVAPEKLFNFLRDEQLRAEWDIL 658

Query: 477 NVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAF 536
                        S   P          Q         EH   + ++R    S  Q    
Sbjct: 659 -------------SNGGPMQEMANIAKGQ---------EHGNSVSLLRASAMSANQSSML 696

Query: 537 VSRDIHLLQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLD 587
           +     L + C+    +A G  S +V+AP+D    ++  + G      LLPSGF I+   
Sbjct: 697 I-----LQETCT----DASG--SMVVYAPVDIPAMQLVMNGGDSTYVALLPSGFAIL--- 742

Query: 588 SKTPDTPDTLTA-HRT 602
              PD P ++ A H+T
Sbjct: 743 ---PDGPSSVGAEHKT 755


>gi|414876612|tpg|DAA53743.1| TPA: outer cell layer1 [Zea mays]
          Length = 702

 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L +       ++P+Q+K WFQNRR + K  
Sbjct: 105 RYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL----GLDPRQVKFWFQNRRTQMKTQ 160

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 161 LERHENALLKQENDKLRAENMAIRE 185



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 120/297 (40%), Gaps = 46/297 (15%)

Query: 212 AARACGLVSLEPT-KIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYT 262
           A+R  GLV ++ +  + E L D   W             LE  T   AG+  G + L+  
Sbjct: 370 ASRESGLVIIDNSLALVETLMDVRRWSDMFSCMIAKATVLEEVTSGIAGSRNGALLLMKA 429

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNP--ASAAQFVRAEMLPS 320
           +    + L P R+   LR+   L  G+  V + S+ G     N   AS A  +R   LPS
Sbjct: 430 ELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGNIRCRRLPS 489

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM--------------- 365
           GC+++    G   +  V++   +  SV ++ RPL  S      R                
Sbjct: 490 GCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLAIL 549

Query: 366 ----TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI- 420
               T++     V+   G++  +    ++R++  F   V+  +   WS +  DGA   I 
Sbjct: 550 MSPDTVSANDSSVITQEGKRSML--KLARRMTENFCAGVSASSAREWSKL--DGAAGSIG 605

Query: 421 --IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
             + V + KS+     P        G++ + A+ +   V P  L  FLR+   R+EW
Sbjct: 606 EDVRVMARKSVDEPGEPP-------GVVLSAATSVWVPVAPEKLFNFLRDEQLRAEW 655


>gi|224063979|ref|XP_002301331.1| predicted protein [Populus trichocarpa]
 gi|222843057|gb|EEE80604.1| predicted protein [Populus trichocarpa]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 21/118 (17%)

Query: 4   VIQQQQQQQRESSSGSIN--------KHQLDN----GKYVRYTAEQVEALERVYSECPKP 51
           V ++ ++++ ES SGS N        +   DN     +Y R+T +Q++ LE ++ ECP P
Sbjct: 52  VGRRSREEEHESRSGSDNMDGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHP 111

Query: 52  SSLRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMN 105
              +R +L R  C     +E +Q+K WFQNRR + K   +R E S L+  N KL A N
Sbjct: 112 DEKQRLELSRRLC-----LETRQVKFWFQNRRTQMKTQLERHENSLLRQDNDKLRAEN 164



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 108/501 (21%), Positives = 184/501 (36%), Gaps = 107/501 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWF--------RDCRSLEVFTMFPAGNAGTIELLYTQ 263
           A+R  G+V +    + E L D   W         R   +  + +       G+++L+  +
Sbjct: 351 ASRETGMVIINSLALVETLMDSNRWAEMFPCMIARTSTTDVIASGMGGTRNGSLQLMQAE 410

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG----SGAGPNPASAAQFVRAEMLP 319
            +  + L P R+   LR+      G   V + S+      SGA P       FV    LP
Sbjct: 411 LHVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRDTSGAPPT------FVNCRRLP 464

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGE------ 373
           SGC+++    G S +  V+H   +   + ++ RP+  S      +  IA    +      
Sbjct: 465 SGCVVQDMPNGYSKVTWVEHAQYDERQIHQLYRPVISSGMGFGAQRWIATLQRQCECLAI 524

Query: 374 ------------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVII 421
                        +   GR+  +    +QR++  F   V       W+ +   G  D  +
Sbjct: 525 LLSSNVPSRDHTAITTSGRRSML--KLAQRMTDNFCAGVCASTVHKWNKLNA-GNVDEDV 581

Query: 422 AVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVD 479
            V + KS+     P        GI+ + A+ +   V P  L  FLR    RSEW   +  
Sbjct: 582 RVMTRKSVDDPGEPP-------GIVLSAATSVWLPVSPQRLFDFLRNERLRSEWDILS-- 632

Query: 480 AYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 539
             +   ++  ++   G                   +H   + ++R    +  Q    +  
Sbjct: 633 --NGGPMQEMAHIAKGQ------------------DHGNCVSLLRASAMNANQSSMLI-- 670

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDE------MFPDDG---PLLPSGFRIIPLDSKT 590
              L + C  +D     A S +V+AP+D       M   D     LLPSGF I+P    +
Sbjct: 671 ---LQETC--ID----AAGSLVVYAPVDTPAMHVVMNGGDSAYVALLPSGFAIVPDGPGS 721

Query: 591 PDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
            D P T               GP  N   G       + S+LT+AFQ    S     +  
Sbjct: 722 RDPPST-------------NGGPTANNVGGQERV---SGSLLTVAFQILVNSLPTAKLTV 765

Query: 651 MARQYVRSVIS-SVQRVAMAI 670
            + + V ++IS +VQ++  A+
Sbjct: 766 ESVETVNNLISCTVQKIKAAL 786


>gi|15983360|gb|AAL11548.1|AF424554_1 At1g17920/F2H15_22 [Arabidopsis thaliana]
 gi|24111361|gb|AAN46804.1| At1g17920/F2H15_22 [Arabidopsis thaliana]
          Length = 406

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 24/133 (18%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           ++ R+T  Q++ LE  ++EC  P   +R QL RE      + P+QIK WFQNRR ++K +
Sbjct: 24  RFHRHTPHQIQRLESTFNECQHPDEKQRNQLSREL----GLAPRQIKFWFQNRRTQKKAQ 79

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA--PATTDASCDS 146
            E            A N  L EEND+++       CEN  +++ ++ A  P+  D+  + 
Sbjct: 80  HE-----------RADNCALKEENDKIR-------CENIAIREAIKHAICPSCGDSPVNE 121

Query: 147 VVTTPQHSLRDAN 159
                +  LR  N
Sbjct: 122 DSYFDEQKLRIEN 134


>gi|357131135|ref|XP_003567196.1| PREDICTED: homeobox-leucine zipper protein TF1-like [Brachypodium
           distachyon]
          Length = 710

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 92/416 (22%), Positives = 159/416 (38%), Gaps = 85/416 (20%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK------- 86
           T +Q   LE  +  C  P   +R+ L       + +  +Q+K WFQN+R + K       
Sbjct: 53  TYQQNLILEGFFGICAHPDDSQRRHLSGA----TGLSMQQVKFWFQNKRTKAKLTIKYAF 108

Query: 87  ----------------QRKEASRLQTVNRKLTAMNKLLME--------------ENDRLQ 116
                            ++E   L   N KLTA N+ L E               + ++ 
Sbjct: 109 INYSFPVISLLLQNDLGKQENYDLIVYNNKLTAENRKLKEAHRNALCPNCIGSPSHHQVY 168

Query: 117 KQVSQLVCENGYMKQQLRTAPATTDASCDSVV---TTPQHSLRDANNPAGLLSIAEETLA 173
            ++ +L   N ++KQQL         S  S      + + ++   N    +  +AE  + 
Sbjct: 169 AEMERLRETNVFLKQQLSRLHVGIQRSSSSSFQFGMSAEDAIAAQNETLIIAVLAEIAMR 228

Query: 174 EFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGV-----------AARACGLVSLE 222
           EF S        W+ + G      + G +A  Q C              A RA  +V ++
Sbjct: 229 EFGSLINTNGPLWLPVHGGSLEILNEGAYA--QECDITNMANLIGFRTEATRAEAVVLMD 286

Query: 223 PTKIAEILKDR-------PSWFRDCRSLEVFTMFP--AGNA-GTIELLYTQAYAPTTLAP 272
           P  + E L D        P      ++++V++ +P  +GN  G + L+ T+   P+ L P
Sbjct: 287 PQNVVEYLMDSECYGSFCPGILSSAKTIKVYS-WPSISGNYDGAMHLMTTETVFPSPLVP 345

Query: 273 ARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGS 332
           +R    LR    L  G++V+ + SL   G        + F   +M PSG LI+P      
Sbjct: 346 SRKCTFLRCCRELPGGAMVIVDMSLDDGG-------GSSFKCCKM-PSGVLIQPIMANSC 397

Query: 333 IIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPAVLRTF 388
            +  ++H+ +    + E+ +P        A+R          V  + RQ A +R  
Sbjct: 398 KVTAIEHVRVVDTGLHELYQPCLTGLMFGARRW---------VESMARQSARMRAL 444


>gi|222612441|gb|EEE50573.1| hypothetical protein OsJ_30722 [Oryza sativa Japonica Group]
          Length = 178

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/38 (71%), Positives = 33/38 (86%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQ 58
           +K  +D+GKYV+YT +QVEALERVY+ECPKPS  RRQQ
Sbjct: 112 DKAGMDSGKYVQYTPDQVEALERVYAECPKPSFCRRQQ 149


>gi|225466249|ref|XP_002268272.1| PREDICTED: homeobox-leucine zipper protein ROC8 [Vitis vinifera]
 gi|297738149|emb|CBI27350.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 22/107 (20%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
           Y R+T +Q++ LE  + +CP P   +R+QL RE      +E +QIK WFQN+R + K + 
Sbjct: 26  YNRHTPQQIQRLEAFFKDCPHPDEAQRRQLGREL----GLESRQIKFWFQNKRTQTKTQH 81

Query: 90  EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA 136
           E            A N  L  EN+R+Q       CEN  +++ L+  
Sbjct: 82  E-----------RADNTALRAENERIQ-------CENLAIREALKNV 110



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 27/187 (14%)

Query: 211 VAARACGLVS--LEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN-AGTIELLYTQAYAP 267
           VA     LV+  L+P K  ++    P+      +++V      G+ +G+++L+Y Q +  
Sbjct: 289 VAMNGMQLVNMFLDPNKYVDLF---PTIVTKASTIQVLEAGIIGSRSGSLQLMYEQMHIL 345

Query: 268 TTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAG-PNPASAAQFVRAEMLPSGCLIRP 326
           + L   R+F+ LRY   ++ G  V+ + S   S  G PN       +R   LPSGC+I+ 
Sbjct: 346 SPLVAPREFYFLRYCQQIELGVWVMVDVSYDYSKDGQPNS------LRFWKLPSGCMIQD 399

Query: 327 CDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPAVLR 386
              G S +  V+H+ ++               K +  R+     SG + +G  R    L+
Sbjct: 400 LPDGCSKVTWVEHVEVD--------------DKSLTHRLYRDLVSGSLAFGAERMVGTLQ 445

Query: 387 TFSQRLS 393
              +RL+
Sbjct: 446 RMCERLA 452


>gi|255541474|ref|XP_002511801.1| homeobox protein, putative [Ricinus communis]
 gi|223548981|gb|EEF50470.1| homeobox protein, putative [Ricinus communis]
          Length = 825

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 28/137 (20%)

Query: 6   QQQQQQQRESSSGSIN--------KHQLDN----GKYVRYTAEQVEALERVYSECPKPSS 53
           ++ ++++ ES SGS N        +   DN     +Y R+T +Q++ LE ++ ECP P  
Sbjct: 90  RRSREEEHESRSGSDNMDGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDE 149

Query: 54  LRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLM 109
            +R +L  R C     +E +Q+K WFQNRR + K   +R E S L+  N KL A      
Sbjct: 150 KQRLELSKRLC-----LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRA------ 198

Query: 110 EENDRLQKQVSQLVCEN 126
            EN  ++  +   +C N
Sbjct: 199 -ENMTIRDAMRNPICSN 214



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 109/294 (37%), Gaps = 48/294 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWF--------RDCRSLEVFTMFPAGNAGTIELLYTQ 263
           A+R  G+V +    + E L D   W         R   +  + +       G+++L++ +
Sbjct: 387 ASREAGMVIINSLALVETLMDSNRWAEMFPCVIARTSTTDVISSGMGGTRNGSLQLMHAE 446

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG---SGAGPNPASAAQFVRAEMLPS 320
               + L P R+   LR+      G   V + S+     +  GP       F     LPS
Sbjct: 447 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGGP------AFANCRRLPS 500

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS-KVVAQRMTI------------ 367
           GC+++    G S +  V+H   +   + ++ RPL  S     AQR               
Sbjct: 501 GCVVQDMPNGYSKVTWVEHAEYDESPIHQLYRPLISSGMGFGAQRWVATLQRQCECLAIL 560

Query: 368 ------AETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVII 421
                 A      +   GR+  +    +QR++  F   V       W+ +   G  D  +
Sbjct: 561 MSSTVPARDHTAAITASGRRSML--KLAQRMTDNFCAGVCASTVHKWNKLNA-GNVDEDV 617

Query: 422 AVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
            V + KS+     P        GI+ + A+ +   V P  L  FLR+   RSEW
Sbjct: 618 RVMTRKSVDDPGEPP-------GIVLSAATSVWLPVSPQRLFDFLRDERLRSEW 664


>gi|226509342|ref|NP_001145713.1| uncharacterized protein LOC100279217 [Zea mays]
 gi|219884129|gb|ACL52439.1| unknown [Zea mays]
          Length = 672

 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 91/412 (22%), Positives = 160/412 (38%), Gaps = 91/412 (22%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQ 263
           A+R   +V +    + EIL D   +            +LEV +   AGN  G ++++  +
Sbjct: 243 ASRDSSVVIMTHASLVEILMDVNQYATVFSSIVSRAATLEVLSTGVAGNYNGALQVMSVE 302

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P RD + +RY     +G+  V + SL  S            ++    PSGCL
Sbjct: 303 FQVPSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDTS----------SVLKCRRRPSGCL 352

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  SV  + + L +S      R  +                
Sbjct: 353 IQEMPNGYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERLASVMAS 412

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GA+DV   V 
Sbjct: 413 NIPTSDIGVITSTEGRKS--MLKLAERMVTSFCGGVTASAAHQWTTLSGSGADDV--RVM 468

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+   A+     + P  +  FLR+   RSEW     D  S
Sbjct: 469 TRKSVDDPGRPP-------GIVLNAATSFWLPITPKRVFDFLRDESSRSEW-----DILS 516

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
              +                  Q +  + +  +H   + ++R+   + + +    S  + 
Sbjct: 517 NGGV-----------------VQEMAHIANGRDHGNCVSLLRVNQSTNSTQ----SNMLI 555

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
           L + C+    +A G  S +++AP+D +          PD   LLPSGF I+P
Sbjct: 556 LQESCT----DASG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 601



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 14/89 (15%)

Query: 41  LERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQTV 97
           +E  + ECP P   +R++L RE  ++    P Q+K WFQN+R + K   +R+E S+L+  
Sbjct: 1   MEAFFKECPHPDDKQRKELSRELGLV----PLQVKFWFQNKRTQMKNQHERQENSQLRAE 56

Query: 98  NRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           N KL A       EN R ++ +S   C N
Sbjct: 57  NEKLRA-------ENMRYKEALSSASCPN 78


>gi|255539515|ref|XP_002510822.1| homeobox protein, putative [Ricinus communis]
 gi|223549937|gb|EEF51424.1| homeobox protein, putative [Ricinus communis]
          Length = 799

 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 7/83 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           KY R+T  Q++ LE  + ECP P   +R +L R       +E KQIK WFQNRR + K  
Sbjct: 103 KYHRHTPLQIQELEVCFKECPHPDEKQRLELSRRL----GLESKQIKFWFQNRRTQMKTQ 158

Query: 87  -QRKEASRLQTVNRKLTAMNKLL 108
            +R E   L+  N KL A N+LL
Sbjct: 159 LERHENIILRQENDKLRAENELL 181



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 121/290 (41%), Gaps = 41/290 (14%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSL----EVFTMFPAGNAGT----IELLYTQ 263
           A R  G+V +    + EIL D   W     SL        +  +G AGT    ++++  +
Sbjct: 360 ATRDTGIVIINILALVEILMDVNRWLEAFPSLIARASTIDVISSGMAGTKNGALQVMNAE 419

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R    LR+      G  VV + S+    A    ++A  F     LPSGC+
Sbjct: 420 FQVVSPLVPVRQVRFLRFCKQHSEGVWVVVDVSID---ANLESSNAHPFAACRRLPSGCI 476

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK-VVAQR-----------MTIAET- 370
           ++    G S +  V+H   +  +V ++ R +  S K   AQR           MTI  + 
Sbjct: 477 LQEMPNGCSKVTWVEHSEYDESAVHQLYRSILSSGKGFGAQRWVATLQRYCECMTILMSP 536

Query: 371 --SGE--VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW-SLMTCDGAEDVIIAVNS 425
             SGE   V  L  + ++L+  +QR+   F   V   +   W  L+  +  EDV I   +
Sbjct: 537 TISGEDQTVMSLSGKKSMLK-LAQRMVDNFCSGVCASSLRKWDKLLVGNIGEDVRIL--T 593

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRS--EW 473
            K+++    P        GI+ + A+ +   V    L  FLR+ RS  EW
Sbjct: 594 RKNINDPGEPP-------GIVLSAATSVWLPVMRQRLFDFLRDERSRCEW 636


>gi|125572285|gb|EAZ13800.1| hypothetical protein OsJ_03723 [Oryza sativa Japonica Group]
          Length = 679

 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 103/492 (20%), Positives = 187/492 (38%), Gaps = 95/492 (19%)

Query: 43  RVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--KEASRLQTVNRK 100
           R +S C  P   +++ L       + +   Q+K WFQN+R + K    KE       N K
Sbjct: 27  RFFSICGHPDDGQKRHLSET----TGLGLDQVKFWFQNKRTQVKTMCWKEE------NYK 76

Query: 101 LTAMNKLLMEENDR---------------------LQKQVSQLVCENGYMKQQLRTAPAT 139
           L+  N++L +EN R                     L  ++ +L+ ++ +++Q++  +  T
Sbjct: 77  LSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQEIARSNGT 136

Query: 140 TDAS--CDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK---- 193
             A+     + ++  +     ++   +  +A+  +   +  A      W  +PG      
Sbjct: 137 PPAANLAFQLNSSADYVFSGQHDQQMIAELAKNAMHALIILAESHVALWFPVPGCSYEVL 196

Query: 194 ---------PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKD-------RPSWF 237
                    PG +S             A RA  +V ++   + + L D        P   
Sbjct: 197 NKMAYDQAYPGDNSANAIGFKTE----ATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEVI 252

Query: 238 RDCRSLEVFTMFPA--GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCER 295
               +  ++T +P   G  G I+L+  +   P+ L PAR    LRY   L+ G +VV + 
Sbjct: 253 SGAVTNRIYT-WPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDV 311

Query: 296 SLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLY 355
           SL            + F +   +PSG LI+        +  ++H+  +   V E+ +P  
Sbjct: 312 SLD---------DGSIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQPCM 362

Query: 356 ESSKVVAQRM--TIAETSGEV--VYGLGRQPAVLRTFSQRLSRGFNDAVNGF-------N 404
                 A+R   T+A  S  +  V+     P V     + L +  +D +  F        
Sbjct: 363 NGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTKGRKNLMKLADDLLASFAGGIAATG 422

Query: 405 DDGWSLMTCDGAE-DVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLV 463
              W+++   G E D+ +A   T   S++ N          IL   AS+ L  +P     
Sbjct: 423 GGTWTVVIGAGTEKDIRVAYRRTTEGSSSYN---------AILSVTASLRLP-LPMRKTF 472

Query: 464 RFLRE--HRSEW 473
             LR   HR +W
Sbjct: 473 DLLRNLTHRCKW 484


>gi|15233048|ref|NP_191674.1| homeobox-leucine zipper protein HDG1 [Arabidopsis thaliana]
 gi|75335834|sp|Q9M2E8.1|HDG1_ARATH RecName: Full=Homeobox-leucine zipper protein HDG1; AltName:
           Full=HD-ZIP protein HDG1; AltName: Full=Homeodomain
           GLABRA 2-like protein 1; AltName: Full=Homeodomain
           transcription factor HDG1; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 1
 gi|6850882|emb|CAB71045.1| homeobox protein [Arabidopsis thaliana]
 gi|15292865|gb|AAK92803.1| putative homeobox protein [Arabidopsis thaliana]
 gi|20465805|gb|AAM20391.1| putative homeobox protein [Arabidopsis thaliana]
 gi|332646640|gb|AEE80161.1| homeobox-leucine zipper protein HDG1 [Arabidopsis thaliana]
          Length = 808

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE V+ EC  P   +R  L R      N++P+Q+K WFQNRR + K  
Sbjct: 113 RYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRL----NLDPRQVKFWFQNRRTQMKTQ 168

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 169 IERHENALLRQENDKLRAENMSVRE 193



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 60/289 (20%), Positives = 111/289 (38%), Gaps = 43/289 (14%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSL-------EVFTMFPAGNAGTIELLYTQA 264
           A++  G V +    + E L D   W     S+       E+ +    G  G + L++ + 
Sbjct: 374 ASKEAGTVIINSLALVETLMDSERWAEMFPSMVSRTSTTEIISSGMGGRNGALHLMHAEL 433

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
              + L P R    LR+      G   V + S+     G + +          LPSGCL+
Sbjct: 434 QLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS-------CRRLPSGCLV 486

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPL------YESSKVVA--QRM----------T 366
           +    G S +  ++H   +   +  + RPL      + + + +A  QR           T
Sbjct: 487 QDMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILMSST 546

Query: 367 IAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNST 426
           ++ ++         + ++L+  ++R++  F   V   +   WS +   G  D  + + + 
Sbjct: 547 VSTSTNPSPINCNGRKSMLK-LAKRMTDNFCGGVCASSLQKWSKLNV-GNVDEDVRIMTR 604

Query: 427 KSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           KS++    P        GI+   A+ +   V P  L  FL     RSEW
Sbjct: 605 KSVNNPGEPP-------GIILNAATSVWMPVSPRRLFDFLGNERLRSEW 646


>gi|5050910|emb|CAB45018.1| homeodomain GLABRA2 like 1 protein [Arabidopsis thaliana]
          Length = 808

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE V+ EC  P   +R  L R      N++P+Q+K WFQNRR + K  
Sbjct: 113 RYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRL----NLDPRQVKFWFQNRRTQMKTQ 168

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 169 IERHENALLRQENDKLRAENMSVRE 193



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 60/289 (20%), Positives = 111/289 (38%), Gaps = 43/289 (14%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSL-------EVFTMFPAGNAGTIELLYTQA 264
           A++  G V +    + E L D   W     S+       E+ +    G  G + L++ + 
Sbjct: 374 ASKEAGTVIINSLALVETLMDSERWAEMFPSMVSRTSTTEIISSGMGGRNGALHLMHAEL 433

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
              + L P R    LR+      G   V + S+     G + +          LPSGCL+
Sbjct: 434 QLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS-------CRRLPSGCLV 486

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPL------YESSKVVA--QRM----------T 366
           +    G S +  ++H   +   +  + RPL      + + + +A  QR           T
Sbjct: 487 QDMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILMSST 546

Query: 367 IAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNST 426
           ++ ++         + ++L+  ++R++  F   V   +   WS +   G  D  + + + 
Sbjct: 547 VSTSTNPSPINCNGRKSMLK-LAKRMTDNFCGGVCASSLQKWSKLNV-GNVDKDVRIMTR 604

Query: 427 KSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           KS++    P        GI+   A+ +   V P  L  FL     RSEW
Sbjct: 605 KSVNNPGEPP-------GIILNAATSVWMPVSPRRLFDFLGNERLRSEW 646


>gi|5702094|gb|AAD47139.1|AF077335_1 Anthocyaninless2 [Arabidopsis thaliana]
          Length = 801

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 40/172 (23%)

Query: 4   VIQQQQQQQRESSSGSINKHQLD------------NGKYVRYTAEQVEALERVYSECPKP 51
           V ++ ++++ ES SGS N   +               +Y R+T +Q++ LE ++ ECP P
Sbjct: 100 VNRRSREEEHESRSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHP 159

Query: 52  SSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLME 110
              +R +L  R C     +E +Q+K WFQNRR + K + E              N LL +
Sbjct: 160 DEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKTQLERHE-----------NALLRQ 203

Query: 111 ENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSV---VTTPQHSLRDAN 159
           END+L+        EN  +++ +R  P  T+    ++   V+  +H LR  N
Sbjct: 204 ENDKLR-------AENMSIREAMRN-PICTNCGGPAMLGDVSLEEHHLRIEN 247



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 116/293 (39%), Gaps = 49/293 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR--DCRSLEVFT--MFPAGNAGTI----ELLYTQ 263
           A+R  G+V +    + E L D   W     C      T  +   G AGTI    +L+  +
Sbjct: 375 ASRTSGMVIINSLALVETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAE 434

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS----GSGAGPNPASAAQFVRAEMLP 319
               + L P R+   LR+      G   V + S+      SG  P        +R   LP
Sbjct: 435 LQVLSPLVPVRNVNFLRFCKQHAEGVWPVVDVSIDPVRENSGGAP-------VIRR--LP 485

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS----------------KVVAQ 363
           SGC+++    G S +  V+H   +   + ++ RPL  S                 + +A 
Sbjct: 486 SGCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAI 545

Query: 364 RMTIAETSGE-VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
            M+ + TS +      G + ++L+  +QR++  F   ++  +   WS +T  G  D  + 
Sbjct: 546 LMSSSVTSHDNTSITPGGRKSMLK-LAQRMTFNFCSGISAPSVHNWSKLTV-GNVDPDVR 603

Query: 423 VNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           V + KS+     P        GI+ + A+ +     P  L  FLR    R EW
Sbjct: 604 VMTRKSVDDPGEPP-------GIVLSAATSVWLPAAPQRLYDFLRNERMRCEW 649


>gi|30678721|ref|NP_567183.2| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
 gi|122223902|sp|Q0WV12.1|ANL2_ARATH RecName: Full=Homeobox-leucine zipper protein ANTHOCYANINLESS 2;
           AltName: Full=HD-ZIP protein ANL2; AltName:
           Full=Homeodomain protein AHDP; AltName: Full=Homeodomain
           transcription factor ANL2
 gi|110742219|dbj|BAE99036.1| homeodomain protein AHDP [Arabidopsis thaliana]
 gi|332656526|gb|AEE81926.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
          Length = 802

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 40/172 (23%)

Query: 4   VIQQQQQQQRESSSGSINKHQLD------------NGKYVRYTAEQVEALERVYSECPKP 51
           V ++ ++++ ES SGS N   +               +Y R+T +Q++ LE ++ ECP P
Sbjct: 100 VNRRSREEEHESRSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHP 159

Query: 52  SSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLME 110
              +R +L  R C     +E +Q+K WFQNRR + K + E              N LL +
Sbjct: 160 DEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKTQLERHE-----------NALLRQ 203

Query: 111 ENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSV---VTTPQHSLRDAN 159
           END+L+        EN  +++ +R  P  T+    ++   V+  +H LR  N
Sbjct: 204 ENDKLR-------AENMSIREAMRN-PICTNCGGPAMLGDVSLEEHHLRIEN 247



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 116/293 (39%), Gaps = 49/293 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR--DCRSLEVFT--MFPAGNAGTI----ELLYTQ 263
           A+R  G+V +    + E L D   W     C      T  +   G AGTI    +L+  +
Sbjct: 376 ASRTSGMVIINSLALVETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAE 435

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS----GSGAGPNPASAAQFVRAEMLP 319
               + L P R+   LR+      G   V + S+      SG  P        +R   LP
Sbjct: 436 LQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSGGAP-------VIRR--LP 486

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS----------------KVVAQ 363
           SGC+++    G S +  V+H   +   + ++ RPL  S                 + +A 
Sbjct: 487 SGCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAI 546

Query: 364 RMTIAETSGE-VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
            ++ + TS +      G + ++L+  +QR++  F   ++  +   WS +T  G  D  + 
Sbjct: 547 LISSSVTSHDNTSITPGGRKSMLK-LAQRMTFNFCSGISAPSVHNWSKLTV-GNVDPDVR 604

Query: 423 VNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           V + KS+     P        GI+ + A+ +     P  L  FLR    R EW
Sbjct: 605 VMTRKSVDDPGEPP-------GIVLSAATSVWLPAAPQRLYDFLRNERMRCEW 650


>gi|194697640|gb|ACF82904.1| unknown [Zea mays]
          Length = 272

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R TAEQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 132

Query: 89  K---EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
           +   +  RL+     L A ++ L+ +ND L+ QV  L 
Sbjct: 133 QLETDYDRLKAAYDALAADHQGLLADNDNLRAQVISLT 170


>gi|297817426|ref|XP_002876596.1| hypothetical protein ARALYDRAFT_324546 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322434|gb|EFH52855.1| hypothetical protein ARALYDRAFT_324546 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 811

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE V+ EC  P   +R  L R      N++P+Q+K WFQNRR + K  
Sbjct: 116 RYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRL----NLDPRQVKFWFQNRRTQMKTQ 171

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 172 IERHENALLRQENDKLRAENMSVRE 196



 Score = 38.9 bits (89), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 81/411 (19%), Positives = 155/411 (37%), Gaps = 86/411 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDR-------PSWFRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A++  G V +    + E L D        PS      + E+ +    G+  G + L++ +
Sbjct: 374 ASKEAGTVIINSLALVETLMDSERWAEMFPSMISRTSTTEIISSGMGGSRNGALHLMHAE 433

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R    LR+      G   V + S+     G + +          LPSGCL
Sbjct: 434 LQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS-------CRRLPSGCL 486

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPL------YESSKVVA--QRM---------- 365
           ++    G S +  ++H   +   +  + RPL      + + + +A  QR           
Sbjct: 487 VQDMANGCSKVTWIEHTEYDENRIHRLYRPLLSCGLAFGAHRWMAALQRQCECLTILMSS 546

Query: 366 TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
           T++ +          + ++L+  ++R++  F   V   +   WS +   G  D  + + +
Sbjct: 547 TVSPSPNPTPINCNGRKSMLK-LAKRMTDNFCGGVCASSLQKWSKLNV-GNVDEDVRIMT 604

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS++    P        GI+   A+ +   + P  L  FL     RSEW   +    + 
Sbjct: 605 RKSVNNPGEPP-------GIILNAATSVWMPISPRRLFDFLGNERLRSEWDILS----NG 653

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
             +K  ++                +  GH  +H   + ++R    +  Q    + ++  +
Sbjct: 654 GPMKEMAH----------------IAKGH--DHSNSVSLLRASAINANQSSMLILQETSI 695

Query: 544 LQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIP 585
                    +A GA   +V+AP+D    +   + G      LLPSGF I+P
Sbjct: 696 ---------DAAGAL--VVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILP 735


>gi|197116133|dbj|BAG68844.1| homeodomain-containing transcription factor FWA [Arabidopsis
           suecica]
          Length = 689

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 85/388 (21%), Positives = 144/388 (37%), Gaps = 78/388 (20%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 86
           R+TA Q++ LE  Y E   P+  +R +L +      N+EPKQ+K WFQN+RC+ K     
Sbjct: 48  RHTAYQIQELENFYLENSLPTEDQRYELGQRL----NMEPKQVKFWFQNKRCQMKINSDR 103

Query: 87  -----QRKEASRLQTVNRKL-TAM--------------------NKLLMEENDRLQKQVS 120
                 R++  RL     +L +AM                     ++LM EN +L++++ 
Sbjct: 104 LENITLREDHDRLLVTQHQLRSAMLHSLCNICGRATHCGDIDYEMQILMVENAKLEREID 163

Query: 121 QLVCENGYMKQQLRTAPATTDASCDS----VVTTPQHSLRDANNPAGLLSIAEETLAEFL 176
           Q   +      Q+  +P+     C S    +  TP+  L       G     E+  + FL
Sbjct: 164 QYYSKIRSHPNQMLVSPSQPAPHCSSSNPGINATPELGL------GGGTRATEKERSMFL 217

Query: 177 SKATGTAVDWVQMP------GMKPGPDSVGIFAISQSCSGV-------------AARACG 217
           + A     + +++       G      S  +  I +                  A+R  G
Sbjct: 218 NLAITALKELIELEAKHCPFGKIDSGSSKAVSLIYEKYENASNNVIKPPGHVVEASRDTG 277

Query: 218 LVSLEPTKIAEILKDRPSWFRDCRSL----EVFTMFPAGNAGT----IELLYTQAYAPTT 269
           LV +    + +   D   W      +        + P G+ GT    ++L+  +    + 
Sbjct: 278 LVPMTCLTLVKTFMDTGKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQIISP 337

Query: 270 LAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDG 329
           L P R    LRY   L  G  VV + +        NP   +    +  LPSG  I     
Sbjct: 338 LVPKRQVTFLRYCKELRQGFWVVVDVT-----PDQNPTLLSNG-GSNRLPSGLFIEDMAN 391

Query: 330 GGSIIHIVDHLNLEAWSVPEVLRPLYES 357
           G S +  ++        +  + +PL  S
Sbjct: 392 GYSKVTWIEQAEYNESHIHPLYQPLIGS 419


>gi|2245130|emb|CAB10551.1| GLABRA2 like protein [Arabidopsis thaliana]
 gi|7268524|emb|CAB78774.1| GLABRA2 like protein [Arabidopsis thaliana]
          Length = 661

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 133/606 (21%), Positives = 236/606 (38%), Gaps = 144/606 (23%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ E   P +  R +L ++      + P Q+K WFQN+R + K  
Sbjct: 91  RYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKL----GLSPIQVKFWFQNKRTQIK-- 144

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENGYMKQQ---LRTA 136
             A + ++ N KL A N+ L  E+  +Q     L C         EN  ++Q+   LR+ 
Sbjct: 145 --AQQSRSDNAKLKAENETLKTESQNIQSNFQCLFCSTCGHNLRLENARLRQELDRLRSI 202

Query: 137 PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM---- 192
            +  + S    + TP+    + NN   +L IAEE  A  +  A   A +  +M  +    
Sbjct: 203 VSMRNPSPSQEI-TPE---TNKNNNDNML-IAEEEKAIDMELAVSCARELAKMCDINEPL 257

Query: 193 --KPGPDSVGIFAISQSCSGV---------------AARACGLVSLEPTKIAEILKDRPS 235
             K   D+  +    +    +               A+RA  ++ L    + +   D   
Sbjct: 258 WNKKRLDNESVCLNEEEYKKMFLWPLMNDDDRFRREASRANAVIMLNCITLVKAFLDADK 317

Query: 236 WFRDCRSLEVFTMFP-AGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDN---GSLV 291
           W       E+F  FP   +A T +++ + A  P+             T  L N   G  +
Sbjct: 318 WS------EMF--FPIVSSAKTAQIISSGASGPSG------------TLLLQNAEEGKWM 357

Query: 292 VCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSV-PEV 350
           V +  +        PASA    +    PSGC+I+    G S +  V+H+ +E   V  EV
Sbjct: 358 VVDFPIDRI----KPASATTTDQYRRKPSGCIIQAMRNGYSQVTWVEHVEVEEKHVQDEV 413

Query: 351 LRPLYESSKVVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL 410
           +R   ES                V +G  R  +VL+   +R++           D G   
Sbjct: 414 VREFVESG---------------VAFGAERWLSVLKRQCERMASLM---ATNITDLGGIY 455

Query: 411 MTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHR 470
           +TC     +I +V + K+L   S                     Q +     +  +  H 
Sbjct: 456 ITCFT---MIPSVEARKNLMKLS---------------------QRMVKTFCLNIINSHG 491

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 530
                   D     S K       G+ P     S  ++P      H+++ +++R +   L
Sbjct: 492 QAPTK---DTVKIVSRKVCG----GLVPCAV--SVTLLPYS----HQQVFDLLR-DNQRL 537

Query: 531 AQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGF 581
           +Q ++  S ++ L+   +  D +     S LV++ +D +          P + PLLP GF
Sbjct: 538 SQVESNSSHNVELMLQETCTDNSG----SLLVYSTVDPVAVQLAMNGEDPSEIPLLPVGF 593

Query: 582 RIIPLD 587
            ++P++
Sbjct: 594 SVVPVN 599


>gi|357136990|ref|XP_003570085.1| PREDICTED: homeobox-leucine zipper protein ROC5-like [Brachypodium
           distachyon]
          Length = 791

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L R      +++ +Q+K WFQNRR + K  
Sbjct: 90  RYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL----SLDARQVKFWFQNRRTQMKTQ 145

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 146 LERHENALLKQENDKLRAENMTIRE 170



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 118/295 (40%), Gaps = 42/295 (14%)

Query: 212 AARACGLVSLEPT-KIAEILKDRPSWFRDCRSL--------EVFTMFPAGNAGTIELLYT 262
           A+R  GLV ++ +  + E L D   W      +        EV T       G++ L+  
Sbjct: 358 ASRESGLVIIDNSVALVETLMDERRWSDMFSCMIAKATILEEVSTGIAGSRNGSLLLMKA 417

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA--SAAQFVRAEMLPS 320
           +    + L P R+   LR+   L  G+  V + S+ G     N A  S A  ++   LPS
Sbjct: 418 ELQVLSPLVPIREVIFLRFCKQLAEGAWAVVDVSIDGLMRDQNSATTSTAANLKCRRLPS 477

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--ETSGEVVYGL 378
           GC+++    G   +  V+H   +  SV +  RPL  S         +A  +   E +  L
Sbjct: 478 GCVMQDTPSGFCKVTWVEHTEYDEASVHQFYRPLLRSGLAFGASRWLATLQRQCECLAIL 537

Query: 379 GRQPAV---------------LRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI--- 420
              P V               +   ++R++  F   V+  +   WS +  DGA   I   
Sbjct: 538 MSPPTVAASEPMAISLEGKRSMLKLARRMTDNFCAGVSASSAREWSKL--DGATGSIGED 595

Query: 421 IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           + V + KS+S    P        G++ + A+ +   V P  L  FLR+   R+EW
Sbjct: 596 VRVMARKSVSEPGEPP-------GVVLSAATSVWVPVAPEKLFDFLRDEQLRAEW 643


>gi|223973911|gb|ACN31143.1| unknown [Zea mays]
 gi|223974081|gb|ACN31228.1| unknown [Zea mays]
 gi|238011808|gb|ACR36939.1| unknown [Zea mays]
          Length = 330

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 10/151 (6%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 74  KKRRLTPEQVLLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 129

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
              ++  RL+     L A +  L+++N+RL+ QV  L  E    K+      AT D +  
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNNRLRSQVVSLT-EKLQEKEDATEGGATADTAAP 188

Query: 146 SVVTTPQ--HSLRDANNPAGLLSIAEETLAE 174
           +V         + +   PA    + +E  +E
Sbjct: 189 AVDVEASLADDVEEPAEPAATFEVLQEVKSE 219


>gi|195623632|gb|ACG33646.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|195624474|gb|ACG34067.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
          Length = 331

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 10/151 (6%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 74  KKRRLTPEQVLLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 129

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
              ++  RL+     L A +  L+++N+RL+ QV  L  E    K+      AT D +  
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNNRLRSQVVSLT-EKLQEKEDATEGGATADTAAP 188

Query: 146 SVVTTPQ--HSLRDANNPAGLLSIAEETLAE 174
           +V         + +   PA    + +E  +E
Sbjct: 189 AVDVEASLADDVEEPAEPAATFEVLQEVKSE 219


>gi|147820899|emb|CAN60897.1| hypothetical protein VITISV_008020 [Vitis vinifera]
          Length = 461

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 22/107 (20%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
           Y R+T +Q++ LE  + +CP P   +R+QL RE      +E +QIK WFQN+R + K + 
Sbjct: 26  YNRHTPQQIQRLEAFFKDCPHPDEAQRRQLGREL----GLESRQIKFWFQNKRTQTKTQH 81

Query: 90  EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA 136
           E            A N  L  EN+R+Q       CEN  +++ L+  
Sbjct: 82  E-----------RADNTALRAENERIQ-------CENLAIREALKNV 110


>gi|186511404|ref|NP_001118907.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
 gi|332656527|gb|AEE81927.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
          Length = 570

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 40/172 (23%)

Query: 4   VIQQQQQQQRESSSGSINKHQLD------------NGKYVRYTAEQVEALERVYSECPKP 51
           V ++ ++++ ES SGS N   +               +Y R+T +Q++ LE ++ ECP P
Sbjct: 100 VNRRSREEEHESRSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHP 159

Query: 52  SSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLME 110
              +R +L  R C     +E +Q+K WFQNRR + K + E              N LL +
Sbjct: 160 DEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKTQLERHE-----------NALLRQ 203

Query: 111 ENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSV---VTTPQHSLRDAN 159
           END+L+        EN  +++ +R  P  T+    ++   V+  +H LR  N
Sbjct: 204 ENDKLR-------AENMSIREAMRN-PICTNCGGPAMLGDVSLEEHHLRIEN 247



 Score = 43.5 bits (101), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 21/158 (13%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR--DCRSLEVFT--MFPAGNAGTI----ELLYTQ 263
           A+R  G+V +    + E L D   W     C      T  +   G AGTI    +L+  +
Sbjct: 376 ASRTSGMVIINSLALVETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAE 435

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS----GSGAGPNPASAAQFVRAEMLP 319
               + L P R+   LR+      G   V + S+      SG  P        +R   LP
Sbjct: 436 LQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSGGAP-------VIRR--LP 486

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYES 357
           SGC+++    G S +  V+H   +   + ++ RPL  S
Sbjct: 487 SGCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRS 524


>gi|1814424|gb|AAB41901.1| homeodomain protein AHDP [Arabidopsis thaliana]
          Length = 745

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 40/172 (23%)

Query: 4   VIQQQQQQQRESSSGSINKHQLD------------NGKYVRYTAEQVEALERVYSECPKP 51
           V ++ ++++ ES SGS N   +               +Y R+T +Q++ LE ++ ECP P
Sbjct: 60  VNRRSREEEHESRSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHP 119

Query: 52  SSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLME 110
              +R +L  R C     +E +Q+K WFQNRR + K + E              N LL +
Sbjct: 120 DEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKTQLERHE-----------NALLRQ 163

Query: 111 ENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSV---VTTPQHSLRDAN 159
           END+L+        EN  +++ +R  P  T+    ++   V+  +H LR  N
Sbjct: 164 ENDKLR-------AENMSIREAMRN-PICTNCGGPAMLGDVSLEEHHLRIEN 207



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 117/293 (39%), Gaps = 49/293 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR--DCRSLEVFT--MFPAGNAGTI----ELLYTQ 263
           A+R  G+V +    + E L D   W     C      T  +   G AGTI    +L+  +
Sbjct: 336 ASRTSGMVIINSLALVETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAE 395

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS----GSGAGPNPASAAQFVRAEMLP 319
               + L P R+   LR+      G   V + S+      SG  P        +R   LP
Sbjct: 396 LQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSGGAP-------VIRR--LP 446

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS----------------KVVAQ 363
           SGC+++    G S +  V+H   +   + ++ RPL  S                 + +A 
Sbjct: 447 SGCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAI 506

Query: 364 RMTIAETSGE-VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
            ++ + TS +     LG + ++L+  +QR++  F   ++  +   WS +T  G  D  + 
Sbjct: 507 LISSSVTSHDNTSITLGGRKSMLK-LAQRMTFNFCSGISAPSVHNWSKLTV-GNVDPDVR 564

Query: 423 VNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           V + KS+     P        GI+ + A+ +     P  L  FLR    R EW
Sbjct: 565 VMTRKSVDDPGEPP-------GIVLSAATSVWLPAAPQRLYDFLRNERMRCEW 610


>gi|357507075|ref|XP_003623826.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355498841|gb|AES80044.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 778

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 9/86 (10%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 94  RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 148

Query: 87  --QRKEASRLQTVNRKLTAMNKLLME 110
             +R E S L+  N KL A N  + E
Sbjct: 149 QLERHENSLLRQANDKLRAENMSIRE 174



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 113/307 (36%), Gaps = 50/307 (16%)

Query: 204 ISQSCSGV--------AARACGLVSLEPTKIAEILKDRPSW--------FRDCRSLEVFT 247
           IS  C G+        A+R  G+V +    + E L D   W         R   +  + +
Sbjct: 331 ISTPCIGLKPNGFVSEASRESGVVIINSLALVETLMDSNRWSEMFPCVIARSSTTEVISS 390

Query: 248 MFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA 307
                  G ++L+  +    + L P R+   LR+      G   V + S+         A
Sbjct: 391 GINGTRNGALQLMQAELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSIDT--IRETSA 448

Query: 308 SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPL------YESSKVV 361
            A  F+    LPSGC+++    G S +  V+H   E   V ++ RPL      + + + V
Sbjct: 449 GAPTFLTCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSLGMGFGAQRWV 508

Query: 362 A--QRM----------TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS 409
           A  QR           ++       +   GR+  +    + R++  F   V       W+
Sbjct: 509 ATLQRQCECLAILMSSSLPSREHSAISAGGRRSML--KLAHRMTNNFCAGVCASTVHKWN 566

Query: 410 LMTCDG-AEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE 468
            +      EDV   V + KS+     P        GI+ + A+ +     P  +  FLR 
Sbjct: 567 KLNAGNVGEDV--RVMTRKSVDDPGEPP-------GIVLSAATSVWLPASPQKVFDFLRN 617

Query: 469 H--RSEW 473
              RSEW
Sbjct: 618 EKLRSEW 624


>gi|449533164|ref|XP_004173547.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like, partial
           [Cucumis sativus]
          Length = 365

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 23/134 (17%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           KY R+T EQ+  +E ++ E P P   +RQQL +       + P+Q+K WFQNRR + K  
Sbjct: 115 KYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRL----GLSPRQVKFWFQNRRTQIKAI 170

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
            +R E + L+    KL   NK + E + +      ++ C N            T DA+ D
Sbjct: 171 QERHENTLLKAEMEKLREENKAMREISKK------KIGCPNC----------GTADATQD 214

Query: 146 SVVTTPQHSLRDAN 159
            +V T    LR  N
Sbjct: 215 DLVFTTTEQLRIKN 228


>gi|226496749|ref|NP_001148520.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|195619978|gb|ACG31819.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|413922242|gb|AFW62174.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R TAEQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 132

Query: 89  K---EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
           +   +  RL+     L A ++ L+ +ND L+ QV  L 
Sbjct: 133 QLETDYDRLKAAYDALAADHQGLLADNDNLRAQVISLT 170


>gi|119331578|gb|ABL63115.1| DNA-binding protein [Catharanthus roseus]
          Length = 282

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 13/177 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R TA+QV+ LE+ +    K    R+ QL +E      ++P+Q+ +WFQNRR R K +
Sbjct: 41  KKRRLTADQVQFLEKSFEVENKLEPERKVQLAKEL----GLQPRQVAIWFQNRRARYKTK 96

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
              KE   L++   KL A    L +EN++L+ +V +L+ E   M+++ +    T D+ C 
Sbjct: 97  QLEKEYDSLKSSFDKLNADYDSLFKENEKLKNEV-KLLTEKLLMREKEKGKSKTCDSLCG 155

Query: 146 SVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIF 202
             +   +  L  +N+   L  I +E  A   S A     D    P    G  S  +F
Sbjct: 156 FDIEPDEKQLA-SNSAVCLPGIKQEDAA---SSAKSDVFD-SDSPHCTDGNHSSNVF 207


>gi|212275139|ref|NP_001130421.1| uncharacterized protein LOC100191517 [Zea mays]
 gi|194689074|gb|ACF78621.1| unknown [Zea mays]
 gi|194700286|gb|ACF84227.1| unknown [Zea mays]
 gi|238011534|gb|ACR36802.1| unknown [Zea mays]
          Length = 290

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 11/159 (6%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 34  KKRRLTPEQVLLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 89

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
              ++  RL+     L A +  L+++N+RL+ QV  L  E    K+      AT D +  
Sbjct: 90  QLERDFDRLKASFDALRADHDALLQDNNRLRSQVVSLT-EKLQEKEDATEGGATADTAAP 148

Query: 146 SVVTTPQ--HSLRDANNPAGLLSIAEETLAE-FLSKATG 181
           +V         + +   PA    + +E  +E  LS  +G
Sbjct: 149 AVDVEASLADDVEEPAEPAATFEVLQEVKSEDRLSTGSG 187


>gi|449523245|ref|XP_004168634.1| PREDICTED: homeobox-leucine zipper protein HDG11-like, partial
           [Cucumis sativus]
          Length = 324

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 24/122 (19%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+   Q++ LE  + +CP P   +R+QL RE      +E KQIK WFQN+R + K   
Sbjct: 27  YHRHNPYQIQQLESFFRQCPHPDENQRRQLSREL----GLETKQIKFWFQNKRTQTKAQN 82

Query: 87  QRKEASRLQTVNRKLTAMNKLLME----------------ENDRLQKQVSQLVCENGYMK 130
           +R + S L+T N K+   N  + E                E +R Q+ + +L  EN ++K
Sbjct: 83  ERADNSSLRTENEKIQCENLAIREALRNVICPSCGGPPFGEEER-QRNLQKLRLENSHLK 141

Query: 131 QQ 132
           ++
Sbjct: 142 EE 143


>gi|125531139|gb|EAY77704.1| hypothetical protein OsI_32745 [Oryza sativa Indica Group]
          Length = 442

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/38 (71%), Positives = 33/38 (86%)

Query: 21  NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQ 58
           +K  +D+GKYV+YT +QVEALERVY+ECPKPS  RRQQ
Sbjct: 376 DKAGMDSGKYVQYTPDQVEALERVYAECPKPSFSRRQQ 413


>gi|124359623|gb|ABN06007.1| Homeodomain-related [Medicago truncatula]
          Length = 365

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 7/84 (8%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T+EQ+  +E ++ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 143 YHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 198

Query: 87  QRKEASRLQTVNRKLTAMNKLLME 110
           +R E S L++   KL   NK L E
Sbjct: 199 ERHENSLLKSEIEKLREKNKTLRE 222


>gi|115447877|ref|NP_001047718.1| Os02g0674800 [Oryza sativa Japonica Group]
 gi|75121322|sp|Q6EPF0.1|ROC5_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC5; AltName:
           Full=GLABRA 2-like homeobox protein 5; AltName:
           Full=HD-ZIP protein ROC5; AltName: Full=Homeodomain
           transcription factor ROC5; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 5
 gi|50253214|dbj|BAD29470.1| GL2-type homeobox genes [Oryza sativa Japonica Group]
 gi|113537249|dbj|BAF09632.1| Os02g0674800 [Oryza sativa Japonica Group]
 gi|222623431|gb|EEE57563.1| hypothetical protein OsJ_07908 [Oryza sativa Japonica Group]
          Length = 804

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L R      +++ +Q+K WFQNRR + K  
Sbjct: 101 RYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL----SLDARQVKFWFQNRRTQMKTQ 156

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 157 LERHENALLKQENDKLRAENMTIRE 181



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 117/301 (38%), Gaps = 54/301 (17%)

Query: 212 AARACGLVSLEPT-KIAEILKDRPSWFRDCRSL--------EVFTMFPAGNAGTIELLYT 262
           A+R  GLV ++ +  + E L D   W      +        EV T       G + L+  
Sbjct: 371 ASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNGALLLMKA 430

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG------SGAGPNPASAAQFVRAE 316
           +    + L P R+   LR+   L  G+  V + S+ G      SG  P   +    V+  
Sbjct: 431 ELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGN----VKCR 486

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQR------------ 364
            +PSGC+++    G   +  V+H   +  SV ++ RPL  S      R            
Sbjct: 487 RVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCEC 546

Query: 365 -------MTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAE 417
                   T+       +   G++   +   ++R++  F   V+  +   WS +  DGA 
Sbjct: 547 LAILMSSATVTANDSTAISQEGKRS--MLKLARRMTENFCAGVSASSAREWSKL--DGAT 602

Query: 418 DVI---IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSE 472
             I   + V + KS+S    P        G++ + A+ +   V P  L  FLR+   R+E
Sbjct: 603 GSIGEDVRVMARKSVSEPGEPP-------GVVLSAATSVWVPVAPEKLFNFLRDEQLRAE 655

Query: 473 W 473
           W
Sbjct: 656 W 656


>gi|218191344|gb|EEC73771.1| hypothetical protein OsI_08446 [Oryza sativa Indica Group]
          Length = 804

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L R      +++ +Q+K WFQNRR + K  
Sbjct: 101 RYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL----SLDARQVKFWFQNRRTQMKTQ 156

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 157 LERHENALLKQENDKLRAENMTIRE 181



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 117/301 (38%), Gaps = 54/301 (17%)

Query: 212 AARACGLVSLEPT-KIAEILKDRPSWFRDCRSL--------EVFTMFPAGNAGTIELLYT 262
           A+R  GLV ++ +  + E L D   W      +        EV T       G + L+  
Sbjct: 371 ASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNGALLLMKA 430

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG------SGAGPNPASAAQFVRAE 316
           +    + L P R+   LR+   L  G+  V + S+ G      SG  P   +    V+  
Sbjct: 431 ELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGN----VKCR 486

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQR------------ 364
            +PSGC+++    G   +  V+H   +  SV ++ RPL  S      R            
Sbjct: 487 RVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCEC 546

Query: 365 -------MTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAE 417
                   T+       +   G++   +   ++R++  F   V+  +   WS +  DGA 
Sbjct: 547 LAILMSSATVTANDSTAISQEGKRS--MLKLARRMTENFCAGVSASSAREWSKL--DGAT 602

Query: 418 DVI---IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSE 472
             I   + V + KS+S    P        G++ + A+ +   V P  L  FLR+   R+E
Sbjct: 603 GSIGEDVRVMARKSVSEPGEPP-------GVVLSAATSVWVPVAPEKLFNFLRDEQLRAE 655

Query: 473 W 473
           W
Sbjct: 656 W 656


>gi|350539483|ref|NP_001234657.1| cutin deficient 2 [Solanum lycopersicum]
 gi|255529749|gb|ACU12849.1| cutin deficient 2 [Solanum lycopersicum]
          Length = 821

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L +      ++E +Q+K WFQNRR + K  
Sbjct: 128 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL----SLETRQVKFWFQNRRTQMKTQ 183

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E S L+  N KL A N  + E
Sbjct: 184 LERHENSILRQENDKLRAENMSIRE 208



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 109/497 (21%), Positives = 190/497 (38%), Gaps = 105/497 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFT----MFPAGNAGT----IELLYTQ 263
           A+R  G+V +    + E L D   W      L   T    +  +G  GT    ++L++ +
Sbjct: 388 ASRETGMVIINSLALVETLMDSNKWAEMFPCLIARTSTTDVISSGMGGTRNGALQLMHAE 447

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R+   LR+      G   V + S+         + A  F  +  LPSGC+
Sbjct: 448 LQVLSPLVPIREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPTFPNSRRLPSGCV 504

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPL------YESSKVVA--QRM---------- 365
           ++    G S +  V+H   E  +   + R L      + + + VA  QR           
Sbjct: 505 VQDMPNGYSKVTWVEHAEYEEGANHHLYRQLISAGMGFGAQRWVATLQRQCECLAILMSS 564

Query: 366 TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
           T++      +   GR+  +    +QR++  F   V       W+ + C G  D  + V +
Sbjct: 565 TVSARDHTAITPSGRRSML--KLAQRMTNNFCAGVCASTVHKWNKL-CAGNVDEDVRVMT 621

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS+     P        GI+ + A+ +   V P  L  FLR+   RSEW   +    + 
Sbjct: 622 RKSVDDPGEP-------AGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILS----NG 670

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
             ++  ++   G                   +H   + ++R    +  Q    +     L
Sbjct: 671 GPMQEMAHIAKGQ------------------DHGNCVSLLRASAMNANQSSMLI-----L 707

Query: 544 LQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLDSKTPDTP 594
            + C     +A GA   +V+AP+D     +  + G      LLPSGF I+      PD P
Sbjct: 708 HETCI----DAAGAL--VVYAPVDIPAMHVVMNGGNSAYVALLPSGFSIV------PDGP 755

Query: 595 DTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
            +  ++           GP+ N       S     S+LT+AFQ    S     +   + +
Sbjct: 756 GSRGSN-----------GPSCNGGPDQRISG----SLLTVAFQILVNSLPTAKLTVESVE 800

Query: 655 YVRSVIS-SVQRVAMAI 670
            V ++IS +VQ++  A+
Sbjct: 801 TVNNLISCTVQKIKAAL 817


>gi|31339103|dbj|BAC77158.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 790

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L R      +++ +Q+K WFQNRR + K  
Sbjct: 87  RYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL----SLDARQVKFWFQNRRTQMKTQ 142

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 143 LERHENALLKQENDKLRAENMTIRE 167



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 117/301 (38%), Gaps = 54/301 (17%)

Query: 212 AARACGLVSLEPT-KIAEILKDRPSWFRDCRSL--------EVFTMFPAGNAGTIELLYT 262
           A+R  GLV ++ +  + E L D   W      +        EV T       G + L+  
Sbjct: 357 ASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNGALLLMKA 416

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG------SGAGPNPASAAQFVRAE 316
           +    + L P R+   LR+   L  G+  V + S+ G      SG  P   +    V+  
Sbjct: 417 ELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGN----VKCR 472

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQR------------ 364
            +PSGC+++    G   +  V+H   +  SV ++ RPL  S      R            
Sbjct: 473 RVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCEC 532

Query: 365 -------MTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAE 417
                   T+       +   G++   +   ++R++  F   V+  +   WS +  DGA 
Sbjct: 533 LAILMSSATVTANDSTAISQEGKRS--MLKLARRMTENFCAGVSASSAREWSKL--DGAT 588

Query: 418 DVI---IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSE 472
             I   + V + KS+S    P        G++ + A+ +   V P  L  FLR+   R+E
Sbjct: 589 GSIGEDVRVMARKSVSEPGEPP-------GVVLSAATSVWVPVAPEKLFNFLRDEQLRAE 641

Query: 473 W 473
           W
Sbjct: 642 W 642


>gi|345193171|tpg|DAA34951.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 787

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 14/98 (14%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T  Q+E LE ++ E   P   +R QL R+      ++P+Q+K WFQNRR   K   
Sbjct: 140 YNRHTPRQIEQLEAMFKEFHHPDEKQRAQLSRQL----GLDPRQVKFWFQNRRTHLKNQL 195

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
           +R+E +RL+  N KL         EN  +++ +  LVC
Sbjct: 196 ERQENARLKHENDKLRV-------ENLSIREAIRDLVC 226


>gi|449479674|ref|XP_004155671.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 549

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 86/411 (20%), Positives = 157/411 (38%), Gaps = 87/411 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFT-MFPAGNAGTIELLYTQ 263
           A+R   +V +   K+ +I  D   W            ++E+ +   P    G + ++  +
Sbjct: 122 ASRVSAVVFMNHMKLVDIFMDATQWSTVFCGIVSRASTVEILSPGLPGNFNGALHVMSAE 181

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +GS  V + SL      P P +  +       PSGCL
Sbjct: 182 FQVPSPLVPTRENYFVRYCKQQTDGSWAVADVSLDTLRPSPIPNTRRK-------PSGCL 234

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQR------------------M 365
           I+    G S I  V+H+ ++   VP + R L  S      +                   
Sbjct: 235 IQELPNGYSKITWVEHVEVDETGVPTMYRTLVNSGLAFGAKRWVATLDRQSERFATSIAT 294

Query: 366 TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
           TI      V+  +  + ++L+  ++R+   F   V   +   W+ +     ++V   V +
Sbjct: 295 TIPTGDLRVISSIEGRKSMLK-LAERMVTSFCAGVGASSVHAWTALPAAAGDEV--RVVT 351

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS      P        G++ + A+     V P ++  FLR+   RSEW     D  S 
Sbjct: 352 RKSTDEPGRPP-------GVVLSAATSFWIPVSPKVVFDFLRKEKSRSEW-----DILSN 399

Query: 484 ASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHL 543
             L                  Q +  + +       + ++R+   + +Q +  +     L
Sbjct: 400 GGL-----------------VQEMAHIANGRHSGNCVSLLRVNSANSSQSNMLI-----L 437

Query: 544 LQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
            + C+    ++ G  S +++AP+D +          PD   LLPSGF I+P
Sbjct: 438 QESCT----DSTG--SYVIYAPVDTVAMNVVLSGCDPDYVALLPSGFAILP 482


>gi|356575937|ref|XP_003556092.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 731

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K  
Sbjct: 35  RYHRHTPHQIQELEAFFKECPHPDEKQRLDLSKRL----GLENKQVKFWFQNRRTQMKTQ 90

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E   L+  N KL A N L+ E        +S  VC N
Sbjct: 91  LERHENIMLRQENDKLRAENSLIKE-------AMSNPVCNN 124



 Score = 46.6 bits (109), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 92/417 (22%), Positives = 156/417 (37%), Gaps = 95/417 (22%)

Query: 212 AARACGLVSLEPTKIAEILKDR-------PSWFRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A R  G+V +    + E L D        PS      +L+V +    G   G +++++ +
Sbjct: 297 ATRETGIVIINSLALVETLMDANRWAEMFPSMIARAINLDVISNGMGGTRNGALQVMHAE 356

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R    +R+      G   V + S+     G + A+A   +    LPSGC+
Sbjct: 357 VQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSIE---IGHDAANAQPSISCRRLPSGCI 413

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGE---------- 373
           ++    G S +  ++H   +   V ++ RPL  S         IA    +          
Sbjct: 414 VQDMPNGYSKVTWLEHWEYDENVVHQLYRPLLSSGVGFGAHRWIATLQRQCECLAILMSS 473

Query: 374 --------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW-SLMTCDGAEDVIIAVN 424
                    +   GR+  +    +QR++  F   V   +   W SL      +D  + V 
Sbjct: 474 SISSDSHTALSQAGRRSML--KLAQRMTSNFCSGVCASSARKWDSLHIGTLGDD--MKVM 529

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + K++     P        GI+ + A+ +   V    L  FLR+   RSEW     D  S
Sbjct: 530 TRKNVDDPGEPP-------GIVLSAATSVWMPVSRQRLFDFLRDERLRSEW-----DILS 577

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH----SLAQEDAFVS 538
                                     P+      +E++ + + +GH    SL + +A  +
Sbjct: 578 NGG-----------------------PM------QEMVHIAKGQGHGNCVSLLRANAVNA 608

Query: 539 RDIHLLQICSGVDENAVGA-CSELVFAPID------EMFPDDG---PLLPSGFRIIP 585
            D  +L +     E  + A CS +V+AP+D       M   D     LLPSGF I+P
Sbjct: 609 NDSSMLIL----QETWMDASCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILP 661


>gi|356535894|ref|XP_003536477.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 751

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K  
Sbjct: 56  RYHRHTPHQIQELEAFFKECPHPDEKQRLDLSKRLA----LENKQVKFWFQNRRTQMKTQ 111

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E   L+  N KL A       EN  ++  +S  VC N
Sbjct: 112 LERHENIMLRQENDKLRA-------ENSLMKDAMSNPVCNN 145



 Score = 46.6 bits (109), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 157/417 (37%), Gaps = 95/417 (22%)

Query: 212 AARACGLVSLEPTKIAEILKDR-------PSWFRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A R  G+V +    + E L D        PS      +L+V +    G   G +++++ +
Sbjct: 318 ATRETGIVIINSLALVETLMDANRWAEMFPSMIARAINLDVISNGMGGTRNGALQVMHAE 377

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R    +R+      G   V + S+     G + A+A   +    LPSGC+
Sbjct: 378 VQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSIE---IGHDAANAQPVMSCRRLPSGCI 434

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK------------------VVAQRM 365
           ++    G S +  ++H   +   V ++ RPL  S                     +    
Sbjct: 435 VQDMPNGYSKVTWLEHWEYDENVVHQLYRPLLSSGVGFGAHRWIATLQRQCECLAILMSS 494

Query: 366 TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW-SLMTCDGAEDVIIAVN 424
           +I+      +   GR+  +    +QR++  F   V   +   W SL      +D  + V 
Sbjct: 495 SISSDDHTALSQAGRRSML--KLAQRMTSNFCSGVCASSARKWDSLHIGTLGDD--MKVM 550

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + K++     P        GI+ + A+ +   V    L  FLR+   RSEW     D  S
Sbjct: 551 TRKNVDDPGEPP-------GIVLSAATSVWVPVSRQRLFDFLRDERLRSEW-----DILS 598

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH----SLAQEDAFVS 538
                                     P+      +E++ + + +GH    SL + +A  +
Sbjct: 599 NGG-----------------------PM------QEMVHIAKGQGHGNCVSLLRANAVNA 629

Query: 539 RDIHLLQICSGVDENAVGA-CSELVFAPID------EMFPDDG---PLLPSGFRIIP 585
            D  +L +     E  + A CS +V+AP+D       M   D     LLPSGF I+P
Sbjct: 630 NDSSMLIL----QETWMDASCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILP 682


>gi|197116199|dbj|BAG68839.1| homeodomain-containing transcription factor FWA [Arabidopsis
           arenosa]
          Length = 689

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 89/389 (22%), Positives = 148/389 (38%), Gaps = 80/389 (20%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 86
           R+TA Q + LE  Y E   P+  +R +L +      N+EPKQ+K WFQN+RC+ K     
Sbjct: 48  RHTAYQTQELENFYLENSLPTEDQRYELGQRL----NMEPKQVKFWFQNKRCQMKINSDR 103

Query: 87  -----QRKEASRLQTVNRKL-TAM--------------------NKLLMEENDRLQKQVS 120
                 R++  RL     +L +AM                     ++LM EN +L++++ 
Sbjct: 104 LENITLREDHDRLLVTQHQLRSAMLQSSCNICGRATHCGDIDYEVQILMVENAKLEREID 163

Query: 121 QLVCENGYMKQQLRTAPATTDASCDS----VVTTPQHSLRDANNPAGLLSIAEETLAEFL 176
           Q   +      Q+  +P+     C S    +  TP+  L       G     E+  + FL
Sbjct: 164 QYYSKIRSHPNQMLVSPSQPAPHCSSSNPGINATPELGL------GGGTRATEKERSMFL 217

Query: 177 SKATGTAVDWVQMPGMKPGP----DSVGIFAIS-------QSCSGV---------AARAC 216
           + A     + +++   K  P    DS    A+S        + + V         A+R  
Sbjct: 218 NLAITALKELIELEA-KHRPFGKIDSRSSKAVSLIYEKYENASNNVIKPPGHVVEASRDT 276

Query: 217 GLVSLEPTKIAEILKDRPSWFRDCRSL----EVFTMFPAGNAGT----IELLYTQAYAPT 268
           GLV +    + +   D   W      +        + P G+ GT    ++L+  +    +
Sbjct: 277 GLVPMTCLTLVKTFMDTGKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQIIS 336

Query: 269 TLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCD 328
            L P R    LRY   L  G  VV + +        NP   +    +  LPSG  I    
Sbjct: 337 PLVPKRQVTFLRYCKELRQGFWVVVDVT-----PDQNPTLLSDG-GSNRLPSGVFIEDMA 390

Query: 329 GGGSIIHIVDHLNLEAWSVPEVLRPLYES 357
            G S +  ++        +  + +PL  S
Sbjct: 391 NGYSQVTWIEQAEYNESHIHPLYQPLIGS 419


>gi|46242599|gb|AAS83417.1| Hox16 [Oryza sativa Japonica Group]
          Length = 353

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 14/126 (11%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 32  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 87

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
              ++  RL+     L A +  L+++N RL  QV  L        ++L+    TT+ S  
Sbjct: 88  QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLT-------EKLQEKETTTEGSAG 140

Query: 146 SVVTTP 151
           + V  P
Sbjct: 141 AAVDVP 146


>gi|414867890|tpg|DAA46447.1| TPA: outer cell layer4 [Zea mays]
          Length = 731

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 18/104 (17%)

Query: 41  LERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRK 100
           +E ++ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +++    +  N  
Sbjct: 1   MEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQQD----RADNVL 52

Query: 101 LTAMNKLLMEENDRLQKQVSQLVCEN----------GYMKQQLR 134
           L A N+ L  +N RLQ  +  +VC N           Y +QQLR
Sbjct: 53  LRAENESLKSDNYRLQAAIRNVVCPNCGHAAVLGEMSYEEQQLR 96


>gi|414867888|tpg|DAA46445.1| TPA: outer cell layer4 isoform 1 [Zea mays]
 gi|414867889|tpg|DAA46446.1| TPA: outer cell layer4 isoform 2 [Zea mays]
          Length = 746

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 18/103 (17%)

Query: 42  ERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKL 101
            R++ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +++    +  N  L
Sbjct: 17  HRLFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQQD----RADNVLL 68

Query: 102 TAMNKLLMEENDRLQKQVSQLVCEN----------GYMKQQLR 134
            A N+ L  +N RLQ  +  +VC N           Y +QQLR
Sbjct: 69  RAENESLKSDNYRLQAAIRNVVCPNCGHAAVLGEMSYEEQQLR 111


>gi|2388574|gb|AAB71455.1| Strong similarity to Phalaenopsis homeobox protein (gb|U34743)
           [Arabidopsis thaliana]
          Length = 749

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 120/305 (39%), Gaps = 61/305 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    I EIL D   W            +L V +   AGN  G ++++  +
Sbjct: 316 ASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQVMSAE 375

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ +  RY     +GS  V + SL      PNP +     R     SGCL
Sbjct: 376 FQVPSPLVPTRETYFARYCKQQGDGSWAVVDISL--DSLQPNPPA-----RCRRRASGCL 428

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV----------------VAQRMTI 367
           I+    G S +  V+H+ ++   V  + + +  +                   +A  M  
Sbjct: 429 IQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMAT 488

Query: 368 AETSGEV------------VYGL-----GRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL 410
             +SGEV             Y +     GR+   +   ++R+   F   V+      W+ 
Sbjct: 489 NISSGEVGESESESQFYINEYAVITNQEGRRS--MLKLAERMVISFCAGVSASTAHTWTT 546

Query: 411 MTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH- 469
           ++  GAEDV   V + KS+     P        GI+ + A+     VPP  +  FLR+  
Sbjct: 547 LSGTGAEDV--RVMTRKSVDDPGRPP-------GIVLSAATSFWIPVPPKRVFDFLRDEN 597

Query: 470 -RSEW 473
            R+EW
Sbjct: 598 SRNEW 602



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 8/86 (9%)

Query: 41  LERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRK 100
           L R + ECP P   +R+QL RE     N+EP Q+K WFQN+R + K   E       N  
Sbjct: 95  LNRFFKECPHPDDKQRKQLSREL----NLEPLQVKFWFQNKRTQMKNHHERHE----NSH 146

Query: 101 LTAMNKLLMEENDRLQKQVSQLVCEN 126
           L A N+ L  +N R ++ ++   C N
Sbjct: 147 LRAENEKLRNDNLRYREALANASCPN 172


>gi|326490099|dbj|BAJ94123.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 123/564 (21%), Positives = 211/564 (37%), Gaps = 133/564 (23%)

Query: 164 LLSIAEETLAEFLSKATGTAVDWVQ-MPGMKPGPDSVGI---FAISQSCSGV-------- 211
            L +A   + E +  A      WV  +PG  P  +S+        SQ C G+        
Sbjct: 307 FLELAISAMDELVKMAQTDDPFWVTGLPGF-PDKESLNFEEYLHSSQHCIGMKPAGFVSE 365

Query: 212 AARACGLVSLEPT-KIAEILKDRPSW--FRDCRSLEVFTMFPAGNA------GTIELLYT 262
           A+R  GLV ++ +  + E L D   W     C   +   +    N       G + L+  
Sbjct: 366 ASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATILEEVSNGIGGTRNGALLLMKA 425

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA--SAAQFVRAEMLPS 320
           +    + L P R+   LR+   L  G+  V + S+ G  +  N A  SA   ++   LPS
Sbjct: 426 ELQVLSPLVPIREVIFLRFCKQLAEGAWAVVDVSIDGLLSNQNSATTSAGANLKCRRLPS 485

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS-------------------KVV 361
           GC+++    G   +  V+H   +  SV +  RPL  S                     ++
Sbjct: 486 GCVMQDTPNGYCKVTWVEHTEYDEASVHQFYRPLLRSGLAFGASRWLATLQRQCECLAIL 545

Query: 362 AQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI- 420
               T +      +   GR+  +    ++R++  F   V+  +   WS +  DGA   I 
Sbjct: 546 MSSATASPNEQTAISQEGRRSML--KLARRMTENFCAGVSASSAREWSKL--DGATGSIG 601

Query: 421 --IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADF 476
             + V + KS+S    P        G++ + A+ +   + P  L  FLR+   R+EW   
Sbjct: 602 EDVRVMARKSVSEPGEPP-------GVVLSAATSVWVPIAPEKLFDFLRDEQLRAEWDIL 654

Query: 477 NVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAF 536
                        S   P     R          GH  ++   + ++R    S  Q    
Sbjct: 655 -------------SNGGPMQEMARIAK-------GH--QNGNSVSLLRASAMSANQSSML 692

Query: 537 VSRDIHLLQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLD 587
           +     L + C+    +A G  S +V+AP+D    ++  + G      LLPSGF I+   
Sbjct: 693 I-----LQETCT----DASG--SIVVYAPVDIPAMQLVMNGGDSTYVALLPSGFAIL--- 738

Query: 588 SKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDN 647
              PD P   + H+T                           S+LT+AFQ    S     
Sbjct: 739 ---PDGPSIGSEHKT-------------------------GGSLLTVAFQILVNSQPTAK 770

Query: 648 VATMARQYVRSVIS-SVQRVAMAI 670
           +   + + V ++IS +++++  A+
Sbjct: 771 LTVESVETVNNLISCTIKKIKTAL 794



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L +      +++ +Q+K WFQNRR + K  
Sbjct: 97  RYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL----SLDARQVKFWFQNRRTQMKTQ 152

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL   N  + E
Sbjct: 153 LERHENALLKQENEKLRTENLTIRE 177


>gi|45593096|gb|AAS68137.1| homeodomain leucine zipper protein 16 [Oryza sativa Japonica Group]
          Length = 353

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 14/126 (11%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 32  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 87

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
              ++  RL+     L A +  L+++N RL  QV  L        ++L+    TT+ S  
Sbjct: 88  QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLT-------EKLQEKETTTEGSAG 140

Query: 146 SVVTTP 151
           + V  P
Sbjct: 141 AAVDVP 146


>gi|357143608|ref|XP_003572981.1| PREDICTED: homeobox-leucine zipper protein HOX16-like [Brachypodium
           distachyon]
          Length = 340

 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 17/123 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LE+ + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 80  KKRRLTPEQVHLLEKSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 135

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-----ATT 140
              ++  RL+     L A +  L+++N RL+ QV  L       K Q + AP     A  
Sbjct: 136 TLERDFDRLKASFDALRADHDALLQDNHRLRSQVVTLT-----EKMQEKEAPGPAGGAAM 190

Query: 141 DAS 143
           DAS
Sbjct: 191 DAS 193


>gi|293336846|ref|NP_001169496.1| uncharacterized protein LOC100383369 [Zea mays]
 gi|224029677|gb|ACN33914.1| unknown [Zea mays]
          Length = 339

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 14/114 (12%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 74  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 129

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPAT 139
              ++  RL+     L A +  L+++N RL+ QV  L        ++LR   AT
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNHRLRSQVVSLT-------EKLREKEAT 176


>gi|413923850|gb|AFW63782.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 339

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 14/114 (12%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 74  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 129

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPAT 139
              ++  RL+     L A +  L+++N RL+ QV  L        ++LR   AT
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNHRLRSQVVSLT-------EKLREKEAT 176


>gi|242076842|ref|XP_002448357.1| hypothetical protein SORBIDRAFT_06g025750 [Sorghum bicolor]
 gi|241939540|gb|EES12685.1| hypothetical protein SORBIDRAFT_06g025750 [Sorghum bicolor]
          Length = 817

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 7/106 (6%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q+  LE ++ E P P   +R +L ++      +EP+Q+K WFQNRR   K  
Sbjct: 105 RYNRHTPHQIARLEAMFKEFPHPDEKQRAELSKQL----GLEPRQVKFWFQNRRTNAKC- 159

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR 134
              + L  ++      N++  +EN RL+++  +L  EN  +++ +R
Sbjct: 160 --LTWLSLLHGPEPGKNQMERQENARLKQENDKLRVENLSIREAMR 203


>gi|195638278|gb|ACG38607.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
          Length = 270

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R TAEQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 132

Query: 89  K---EASRLQTVNRKLTAMNKLLMEENDRLQKQV 119
           +   +  RL+     L A ++ L+ +ND L+ QV
Sbjct: 133 QLETDYDRLKAAYNALAADHQGLLADNDSLRAQV 166


>gi|357448581|ref|XP_003594566.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355483614|gb|AES64817.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 660

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 73/373 (19%), Positives = 150/373 (40%), Gaps = 73/373 (19%)

Query: 26  DNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCRE 85
           ++ +  R++A+Q+  LE ++     P   ++ ++ ++      +EP+Q+K WFQN+R   
Sbjct: 15  ESKRVCRHSADQILKLEEIFKTLTHPDDNQKYEIAQQL----ELEPQQVKWWFQNKRAHI 70

Query: 86  KQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------------ENGYMK 130
           K +     L+  N  L A N+ +++EN  +++++  L+C               EN  +K
Sbjct: 71  KNKN----LKPANDALRAENERILKENMEMKERLKNLLCQSSCNGSNSLKQLQVENARLK 126

Query: 131 QQLRTAPATTDASCDSVVTTPQHSLR-----------------DANNPAGL---LSIAEE 170
           ++        + S +  +  P+ S R                 +  NP  L   L+  EE
Sbjct: 127 ERYEMM-QKKEVSLELKLGLPKSSTRGSTSLNLDRGSSSKSSLEIQNPMMLVAGLAATEE 185

Query: 171 TLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGV-----AARACGLVSLEPTK 225
            L  F  ++        +   ++   + V  F      +G      +++   ++ +  T 
Sbjct: 186 LLKLFRDESLWVKSQLNRRLVLEKNYEDV--FPRVDHFNGAKTHVESSKDSQMLKIGATH 243

Query: 226 IAEILKDRPSW-------FRDCRSLEVFTMFPAGN---AGTIELLYTQAYAP----TTLA 271
           + E+  D   W            +++V     + N   A  + L Y Q +      + L 
Sbjct: 244 LVEMFLDSEKWANLFPTIVNKAETIKVLERDSSQNQSGALLLGLCYVQMHGEMHVLSPLV 303

Query: 272 PARDFWTLRYTTTLDNGSLVVCERSLSG-SGAGPNPASAAQFVRAEMLPSGCLIRPCDGG 330
             R F+ LRY   ++ G  V+ + S       GP+    + F R    PSGC+I+     
Sbjct: 304 KPRQFYFLRYCVQVEAGIWVIADVSYDYLKEDGPH----SSFWR---FPSGCMIQQISNE 356

Query: 331 GSIIHIVDHLNLE 343
            S +  ++H+ ++
Sbjct: 357 TSKVSWIEHVEVD 369


>gi|226505158|ref|NP_001146068.1| uncharacterized protein LOC100279599 [Zea mays]
 gi|219885547|gb|ACL53148.1| unknown [Zea mays]
 gi|414870569|tpg|DAA49126.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 270

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R TAEQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 132

Query: 89  K---EASRLQTVNRKLTAMNKLLMEENDRLQKQV 119
           +   +  RL+     L A ++ L+ +ND L+ QV
Sbjct: 133 QLETDYDRLKAAYNALAADHQGLLADNDSLRAQV 166


>gi|345195192|tpg|DAA34961.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414587883|tpg|DAA38454.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 707

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 152/715 (21%), Positives = 260/715 (36%), Gaps = 163/715 (22%)

Query: 5   IQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           +   Q    E  S  +++ Q  + +  R+T +Q++ LE  +  C  P+   RQ+L  +  
Sbjct: 48  VNTTQTDDDEDQSSHVSE-QTPSNRTKRFTMDQIQQLEAQFRVCRHPNLDARQELAAK-- 104

Query: 65  ILSNIEPKQIKVWFQNRRCREKQ---RKEASRLQTVNRKL-------------------- 101
             + +E +Q+K       C ++    R+E  +L+  N +L                    
Sbjct: 105 --TGLEERQVKA------CGDENKGIRQELGKLKAENEELKQRMLNPICFRCRNPTLATQ 156

Query: 102 -TAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANN 160
            T+  + L+ EN RL+    + V    Y+ + +R   A   AS       P   L     
Sbjct: 157 PTSEKRRLLNENARLR---DEYVRAKAYLDRLIREG-AERRAS-------PSAHLH-LGG 204

Query: 161 PAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGV--------- 211
            A L+S AE  + E +  AT     W  +P M  G        + Q+  G+         
Sbjct: 205 SATLVSHAERAMEELVMLATKGEPMW--LPAMD-GETLNHQEYVLQTFPGLLGLCPPGFV 261

Query: 212 --AARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTT 269
             A R    +      +  +L D   W   C       MFP    GT+  +  + +  + 
Sbjct: 262 EEATRESDTIRGTAMYLVSVLTDANQW---CE------MFP----GTVAYMDAELWVQSP 308

Query: 270 LAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDG 329
               R    LR++  L N    + + S+     G  P  ++   R  +LPSGCL+    G
Sbjct: 309 RLLNRSVKFLRFSKKLSNRRWAMADVSVVDGVCGVEPGGSSTGCR--LLPSGCLLEDMSG 366

Query: 330 GGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA------------QRMTI---------- 367
           G   +  V H   +  SVP + RP  +S + +             + +T+          
Sbjct: 367 GYCKVTWVVHAEYDETSVPSLFRPFLQSGQALGAYRWLRCLQRQCEYITVLRSSLVLPSS 426

Query: 368 -AETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNG-------FNDDGWSLMTCDGAEDV 419
            +  S     G+GR+  +    ++R++  F  AV+G        + D W + +  GAE V
Sbjct: 427 SSSFSAISTLGVGRRSVM--ELARRMTASFYAAVSGPVTVPATSSVDEWRVSSGSGAERV 484

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFL--REHRSEWADFN 477
              V           P         +L A  ++ L   PP  +  +L   + R EW D +
Sbjct: 485 EAVVRLAVWNCADIMPGEPAVT---VLSATTTVWLPGTPPMRVREYLFDLQRRGEW-DAH 540

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
            D      L  GS A      +R  G+ + +                L+  S    D   
Sbjct: 541 ADGGEVQEL--GSVAT----SSRLHGNAVSV----------------LQSTSSVDTDGTD 578

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMFPD---DGP------LLPSGFRIIPLDS 588
           S+ + L +  + V      +CS +V++ ++E       DG       +LPSGF I+P   
Sbjct: 579 SKVLILQETTTDV------SCSLVVYSLVEENLMRGIMDGRERSNVFVLPSGFAILP--- 629

Query: 589 KTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESN 643
                      H       +     + + A  D  S +   S++T+AFQ P   N
Sbjct: 630 ---------DGHGRAHAGDTAATNSSASAAIDDDHSSNAAGSLVTVAFQTPLPGN 675


>gi|326502292|dbj|BAJ95209.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326505580|dbj|BAJ95461.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 336

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 17/123 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 72  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 127

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP-----ATT 140
              ++  RL+     L A +  L+++N RL+ QV  L       K Q + AP     A  
Sbjct: 128 TLERDFDRLKASFDALRADHDALLQDNHRLRSQVVTLT-----EKMQEKEAPEGCFGAAV 182

Query: 141 DAS 143
           DAS
Sbjct: 183 DAS 185


>gi|356561699|ref|XP_003549117.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 827

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 14/100 (14%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T +Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K   
Sbjct: 144 YHRHTPQQIQELEAFFKECPHPDEKQRTDLSKRL----GLENKQVKFWFQNRRTQMKTQL 199

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           +R E   L+  N KL A       EN  ++  ++  +C N
Sbjct: 200 ERHENMILRQENDKLRA-------ENSVMKDALANPICNN 232



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 11/154 (7%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A R  G+VS     + EIL D   W            ++EV +    G  +G ++++  +
Sbjct: 408 ATRGTGVVSASSLGLVEILMDADQWSEMFSSMIASAATVEVLSSGTGGTRSGALQVMLAE 467

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L PAR    LR+      G   V + S+     G N  ++   +    LPSGC+
Sbjct: 468 VQLLSPLVPARQVSFLRFCKKHAEGLWAVVDVSVD---IGRNVTNSHPLMSCRRLPSGCV 524

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYES 357
           I+    G S I  V+H   +   + ++ RPL  S
Sbjct: 525 IQDMPNGFSNITWVEHSQYDESVIHQLYRPLVSS 558


>gi|356529261|ref|XP_003533214.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 771

 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 22/104 (21%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
           Y R+T +Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K + 
Sbjct: 80  YHRHTPQQIQELEAFFKECPHPDEKQRTDLSKRL----GLENKQVKFWFQNRRTQMKTQL 135

Query: 90  EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           E              N +L +END+L+        EN  MK  L
Sbjct: 136 ERHE-----------NMILRQENDKLR-------AENSVMKDAL 161



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 11/154 (7%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTM-FPAGNAGTIELLYTQ 263
           A R  G+V      I E L D   W            +LEV +       +G ++++  +
Sbjct: 343 ATRGTGVVPASSLGIVETLMDVDRWAEMFSSMIASAATLEVLSSGMGESRSGALQVMLAE 402

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L PAR    LRY+     G   V + S+     G N  ++   +    LPSGC+
Sbjct: 403 VQLLSPLVPARSLSFLRYSKQHGEGVWAVVDVSVD---IGRNVTNSHPLMSCRRLPSGCV 459

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYES 357
           I+    G S I  V+H   +   V ++ RPL  S
Sbjct: 460 IQDMPNGFSKITWVEHSQYDESVVHQLYRPLVSS 493


>gi|414884340|tpg|DAA60354.1| TPA: hypothetical protein ZEAMMB73_058304 [Zea mays]
          Length = 623

 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 104/444 (23%), Positives = 163/444 (36%), Gaps = 119/444 (26%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA---------------GNAGT 256
           A+RA G+V    T +   L D   W           MFP+               G  G+
Sbjct: 151 ASRATGVVRASATYLVATLTDARRWSE---------MFPSVVASVTARRDAAISGGVFGS 201

Query: 257 -IELLYT--QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA---- 309
            I+L+    Q ++P  L  + +F  LRYT  +  G   V + S+ G    P    A    
Sbjct: 202 HIQLMNAELQVHSPRLLNRSINF--LRYTKRVAEGRWAVMDVSVDGILGPPGSRVADAAA 259

Query: 310 ------------AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYES 357
                       A +    +LPSGCL+     G   +  V H   +  +VP + RPL+ S
Sbjct: 260 AAAAANGVTLVPAWYTGCRLLPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPLFRS 319

Query: 358 SKVVAQRMTIAET-----------SGEVVYGLGRQPAVLRT--------FSQRLSRGFND 398
            K +     +A             S +V  G     A + +         +QR+   F  
Sbjct: 320 GKALGAHRWLASLQRQCEFLAVLHSSQVSRGGDNTAAAISSMGKRGVLELAQRMVADFYS 379

Query: 399 AVNG------FNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASM 452
           AV+G       + D W      GA     AV         S    ++A L  +L A  ++
Sbjct: 380 AVSGPVTQPSSSIDEWYGSAGAGARRTDTAVRMVT-----SKKAGTVADL--VLSASTTV 432

Query: 453 LLQNVPPALLVRFLRE--HRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPL 510
            L N PP L+ R+LR+   R EW  F   + +   L +                   +P 
Sbjct: 433 WLPNTPPQLVFRYLRDDQRRGEWDAFFASSAAVTELCS-------------------VPT 473

Query: 511 GHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDE-- 568
           GH   +   + V+    +S   +     + + L + C+        +CS +V+AP++E  
Sbjct: 474 GHL--NGNAVSVL----YSNVTDGTDRKKTLILQEACTD------ASCSMVVYAPVEEDS 521

Query: 569 ----MFPDDGP---LLPSGFRIIP 585
               M   D     LLPSGF ++P
Sbjct: 522 MRAVMNGGDHASVFLLPSGFAVLP 545


>gi|356532435|ref|XP_003534778.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 714

 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 22/119 (18%)

Query: 17  SGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKV 76
           SG    HQ     Y R ++ Q   LER   +CP P   +R+QL  E      +E KQIK 
Sbjct: 11  SGDEGSHQGRRPSYKRLSSAQTARLERFIKDCPHPDEAQRRQLASEI----GLETKQIKF 66

Query: 77  WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT 135
           WFQN+R + K + E            A N  L  ENDR+         EN  MK+ L+ 
Sbjct: 67  WFQNKRTQIKNQHE-----------RADNTALRVENDRIH-------TENLLMKEALKN 107



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 14/140 (10%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A +  G+VS+   ++ ++  D   W            +++V      G+ +G ++L++ Q
Sbjct: 282 ATKESGIVSINSIQLIDMFLDPDKWVNLFPTIVTKAETMKVIENGLVGSRSGALQLMFEQ 341

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
            +  + L   R+F  LRY   ++ G  V+ + S               F  +   PSGC+
Sbjct: 342 MHVLSPLVQPREFQFLRYCQQIEEGVWVIADVSFDSF------RQKTSFFHSWRHPSGCM 395

Query: 324 IRPCDGGGSIIHIVDHLNLE 343
           I+    G S++  V+H+ ++
Sbjct: 396 IQEMPNGCSMVTWVEHVEVD 415


>gi|223947725|gb|ACN27946.1| unknown [Zea mays]
          Length = 647

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 168/436 (38%), Gaps = 95/436 (21%)

Query: 212 AARACGLVSLEPT-KIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYT 262
           A+R  GLV ++ +  + E L D   W             LE  T   AG+  G + L+  
Sbjct: 214 ASRESGLVIIDNSLALVETLMDVRRWSDMFSCMIAKATVLEEVTSGIAGSRNGALLLMKA 273

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNP--ASAAQFVRAEMLPS 320
           +    + L P R+   LR+   L  G+  V + S+ G     N   AS A  +R   LPS
Sbjct: 274 ELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGNIRCRRLPS 333

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRM--------------- 365
           GC+++    G   +  V++   +  SV ++ RPL  S      R                
Sbjct: 334 GCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLAIL 393

Query: 366 ----TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI- 420
               T++     V+   G++   +   ++R++  F   V+  +   WS +  DGA   I 
Sbjct: 394 MSPDTVSANDSSVITQEGKRS--MLKLARRMTENFCAGVSASSAREWSKL--DGAAGSIG 449

Query: 421 --IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADF 476
             + V + KS+     P        G++ + A+ +   V P  L  FLR+   R+EW   
Sbjct: 450 EDVRVMARKSVDEPGEPP-------GVVLSAATSVWVPVAPEKLFNFLRDEQLRAEWDIL 502

Query: 477 NVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAF 536
                        S   P          Q         EH   + ++R    S  Q    
Sbjct: 503 -------------SNGGPMQEMANIAKGQ---------EHGNSVSLLRASAMSANQSSML 540

Query: 537 VSRDIHLLQICSGVDENAVGACSELVFAPID----EMFPDDG-----PLLPSGFRIIPLD 587
           +     L + C+    +A G  S +V+AP+D    ++  + G      LLPSGF I+   
Sbjct: 541 I-----LQETCT----DASG--SMVVYAPVDIPAMQLVMNGGDSTYVALLPSGFAIL--- 586

Query: 588 SKTPDTPDTLTA-HRT 602
              PD P ++ A H+T
Sbjct: 587 ---PDGPSSVGAEHKT 599


>gi|357444035|ref|XP_003592295.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355481343|gb|AES62546.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 842

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K  
Sbjct: 59  RYHRHTPNQIQELESFFKECPHPDEKQRLDLSKRL----GLENKQVKFWFQNRRTQMKTQ 114

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E   L+  N KL   N ++ E
Sbjct: 115 LERHENIMLRQENDKLRGENSMMKE 139



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 110/502 (21%), Positives = 193/502 (38%), Gaps = 113/502 (22%)

Query: 212 AARACGLVSLEPTKIAEILKDR-------PSWFRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A R  G+V +    + E L D         S      +L+V +    G   G I L++T+
Sbjct: 319 ATRDTGIVIINSLALVETLMDANRYADMFQSMIARSANLDVLSGGIGGTRNGAIHLMHTE 378

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L P R    LR+      G   V + S+     G +P++A  F+    LPSGC+
Sbjct: 379 VQLLSPLVPVRQVRILRFCKQHAEGVWAVVDVSVE---IGHDPSNAQPFISCRRLPSGCI 435

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPL------YESSKVVA--QRM---------- 365
           ++    G S +  ++H   +   V ++ RPL      + + + +A  QR           
Sbjct: 436 VQDMPNGYSKVTWIEHWEYDESIVHQLYRPLLISGFGFGAHRWIATLQRQCEGLAILMSS 495

Query: 366 TIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW-SLMTCDGAEDVIIAVN 424
           +I+      +   GR+  +    +QR++  F   V   +   W SL     ++D  + V 
Sbjct: 496 SISNDDHTALSQAGRRSML--KLAQRMTNNFCSGVCASSARKWDSLQMGTLSDD--MRVM 551

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + K++     P        GI+ + A+ +   V    L  FLR+   RSEW     D  S
Sbjct: 552 TRKNVDDPGEPP-------GIVLSAATSVWMPVSRQRLFDFLRDERLRSEW-----DILS 599

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGH----SLAQEDAFVS 538
                                     P+      +E++ + + +G     SL + +A  +
Sbjct: 600 NGG-----------------------PM------QEMVHIAKGQGQGNCVSLLRANAVNA 630

Query: 539 RDIHLLQICSGVDENAVGACSELVFAPIDE------MFPDDG---PLLPSGFRIIPLDSK 589
            D  +L +     +    +CS +V+AP+D       M   D     LLPSGF I+P D  
Sbjct: 631 NDSSMLILQETWMDT---SCSVVVYAPVDGQSLNVVMSGGDSAYVALLPSGFAIVP-DGN 686

Query: 590 TPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVA 649
            P                +L+ G A++             S+LT+ FQ    S     + 
Sbjct: 687 DPSGYGMSNG--------TLQKGGASDGGG----------SLLTVGFQILVNSLPTAKLT 728

Query: 650 TMARQYVRSVIS-SVQRVAMAI 670
             +   V ++IS ++Q++  A+
Sbjct: 729 MESVDTVNNLISCTIQKIKAAL 750


>gi|413923851|gb|AFW63783.1| putative homeobox DNA-binding and leucine zipper domain family
           protein isoform 1 [Zea mays]
 gi|413923852|gb|AFW63784.1| putative homeobox DNA-binding and leucine zipper domain family
           protein isoform 2 [Zea mays]
          Length = 299

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 14/114 (12%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 34  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 89

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPAT 139
              ++  RL+     L A +  L+++N RL+ QV  L        ++LR   AT
Sbjct: 90  QLERDFDRLKASFDALRADHDALLQDNHRLRSQVVSLT-------EKLREKEAT 136


>gi|413922241|gb|AFW62173.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 154

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R TAEQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 63  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 118

Query: 89  K---EASRLQTVNRKLTAMNKLLMEENDRLQKQV 119
           +   +  RL+     L A ++ L+ +ND L+ QV
Sbjct: 119 QLETDYDRLKAAYDALAADHQGLLADNDNLRAQV 152


>gi|356532433|ref|XP_003534777.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 675

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 25  LDNGK----YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
           L+ GK    Y R+  +Q   LE ++ +CP P  + R+Q+ ++      +EPKQ+K WFQN
Sbjct: 20  LNKGKKTTTYRRHKEDQRTRLEELFRKCPNPDEIERRQIAKDL----GLEPKQVKFWFQN 75

Query: 81  RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
           +R ++K   E    +  N  L   N+ +  EN  L++ +  ++C
Sbjct: 76  KRTQKKTISE----RVDNNVLRVENERMHNENLVLREALKTIIC 115


>gi|357487803|ref|XP_003614189.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
 gi|355515524|gb|AES97147.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
          Length = 373

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 44/175 (25%)

Query: 24  QLDNGKYVR-YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 82
           Q    +Y R +T  Q+E LE V+ ECPKP+  ++ QL +E  +       QI+ WFQN+R
Sbjct: 31  QSKKKRYRRPHTPNQLERLEEVFKECPKPNEKQKLQLSKELALSYG----QIRFWFQNKR 86

Query: 83  CREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA------ 136
            + K + E +            N+LL  END+++       CEN  MK+ L  +      
Sbjct: 87  TQTKAKLERND-----------NRLLRAENDKIR-------CENISMKEALENSICSSGG 128

Query: 137 --PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAE--FLSKATGTAVDWV 187
             P   D   D      +  LR  N     + + +E   E   +S+ TG +V W 
Sbjct: 129 CPPINGDCYFD------RKRLRFEN-----ILLKDELYKESSIISEYTGRSVSWF 172


>gi|226530684|ref|NP_001150309.1| homeobox-leucine zipper protein HAT7 [Zea mays]
 gi|195638280|gb|ACG38608.1| homeobox-leucine zipper protein HAT7 [Zea mays]
          Length = 341

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 14/137 (10%)

Query: 18  GSINKHQL-DNG------KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           G +N+ +L D+G      K  R   EQV  LE+ +    K    R+ QL R       ++
Sbjct: 99  GGVNEDELSDDGSQAGGEKKRRLNVEQVRTLEKNFELGNKLEPERKLQLARAL----GLQ 154

Query: 71  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQLVCENG 127
           P+Q+ +WFQNRR R K ++       + R+L A+   N  L+  N +LQ ++  L     
Sbjct: 155 PRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKADNDALLSHNKKLQAEILSLKGREA 214

Query: 128 YMKQQLRTAPATTDASC 144
               +L      T+ASC
Sbjct: 215 GGSSELINLNKETEASC 231


>gi|414865055|tpg|DAA43612.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 344

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 14/137 (10%)

Query: 18  GSINKHQL-DNG------KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           G +N+ +L D+G      K  R   EQV  LE+ +    K    R+ QL R       ++
Sbjct: 102 GGVNEDELSDDGSQAGGEKKRRLNVEQVRTLEKNFELGNKLEPERKLQLARAL----GLQ 157

Query: 71  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQLVCENG 127
           P+Q+ +WFQNRR R K ++       + R+L A+   N  L+  N +LQ ++  L     
Sbjct: 158 PRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKADNDALLSHNKKLQAEILSLKGREA 217

Query: 128 YMKQQLRTAPATTDASC 144
               +L      T+ASC
Sbjct: 218 GGSSELINLNKETEASC 234


>gi|413919222|gb|AFW59154.1| outer cell layer2 [Zea mays]
          Length = 863

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 7/105 (6%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
           Y R+T  Q+E LE ++ E   P   +R QL R+      ++P+Q+K WFQNRR      K
Sbjct: 140 YNRHTPRQIEQLEAMFKEFHHPDEKQRAQLSRQL----GLDPRQVKFWFQNRR---THLK 192

Query: 90  EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR 134
             + L  ++      N+L  +EN RL+ +  +L  EN  +++ +R
Sbjct: 193 CLTWLSLLHGPELGKNQLERQENARLKHENDKLRVENLSIREAIR 237


>gi|356558073|ref|XP_003547333.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 713

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 8/107 (7%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS N +Q     Y R T+ Q   LER   +CP P   +R+QL  E      +E KQ+K W
Sbjct: 15  GSDNFNQGRRPSYKRLTSAQTARLERFIKDCPHPDEAQRRQLASEI----GLETKQVKFW 70

Query: 78  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
           FQN+R + K + E +     N  L   N  +  +N  ++K +  ++C
Sbjct: 71  FQNKRTQIKNQHERAD----NTALRVENDRIHSKNLLMKKALKNMLC 113



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 14/140 (10%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A +  G+VS+   ++ ++  D   W           ++++V      G+ +G ++L++ Q
Sbjct: 282 ATKDSGIVSINSIQLVDMFLDSDKWINLFPTIVTKAKTIKVLENGLVGSRSGALQLMFEQ 341

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
            +  + L   R+F  LRY   ++ G  V+ + S               F  +   PSGC+
Sbjct: 342 MHVLSPLVQPREFQFLRYCEQIEEGVWVIADVSFDSF------RQKTSFFHSWRHPSGCM 395

Query: 324 IRPCDGGGSIIHIVDHLNLE 343
           I+    G S++  V+H+ ++
Sbjct: 396 IQEMPNGCSMVTWVEHVEVD 415


>gi|15148918|gb|AAK84886.1|AF402605_1 homeodomain leucine zipper protein HDZ2 [Phaseolus vulgaris]
          Length = 327

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 7/98 (7%)

Query: 28  GKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 87
           GK  R T+EQV+ LER +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 85  GKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKEL----GLQPRQVAIWFQNRRARFKT 140

Query: 88  R---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           +   K+   L+    +L    + L++END+L+ +V+ L
Sbjct: 141 KQLEKDYGTLKASYDRLKGDYESLLQENDKLKAEVNSL 178


>gi|8920421|emb|CAB96422.1| OCL2 protein [Zea mays]
          Length = 725

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 14/98 (14%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+   Q+E LE ++ E   P   +R QL R+      ++P+Q+K WFQNRR   K   
Sbjct: 29  YNRHAPRQIEQLEAMFKEFHHPDEKQRAQLSRQL----GLDPRQVKFWFQNRRTHLKNQL 84

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
           +R+E +RL+  N KL         EN  +++ +  LVC
Sbjct: 85  ERQENARLKQENDKLRV-------ENLSIREAIRDLVC 115


>gi|326531178|dbj|BAK04940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 113/519 (21%), Positives = 195/519 (37%), Gaps = 128/519 (24%)

Query: 205 SQSCSGV--------AARACGLVSLEPT-KIAEILKDRPSW--FRDCRSLEVFTMFPAGN 253
           SQ C G+        A+R  GLV ++ +  + E L D   W     C   +   +    N
Sbjct: 7   SQHCIGMKPAGFVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATILEEVSN 66

Query: 254 A------GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPA 307
                  G + L+  +    + L P R+   LR+   L  G+  V + S+ G  +  N A
Sbjct: 67  GIGGTRNGALLLMKAELQVLSPLVPIREVIFLRFCKQLAEGAWAVVDVSIDGLLSNQNSA 126

Query: 308 --SAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS------- 358
             SA   ++   LPSGC+++    G   +  V+H   +  SV +  RPL  S        
Sbjct: 127 TTSAGANLKCRRLPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQFYRPLLRSGLAFGASR 186

Query: 359 ------------KVVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDD 406
                        ++    T +      +   GR+   +   ++R++  F   V+  +  
Sbjct: 187 WLATLQRQCECLAILMSSATASPNEQTAISQEGRRS--MLKLARRMTENFCAGVSASSAR 244

Query: 407 GWSLMTCDGAEDVI---IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLV 463
            WS +  DGA   I   + V + KS+S    P        G++ + A+ +   + P  L 
Sbjct: 245 EWSKL--DGATGSIGEDVRVMARKSVSEPGEPP-------GVVLSAATSVWVPIAPEKLF 295

Query: 464 RFLREH--RSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLE 521
            FLR+   R+EW                S   P     R          GH  ++   + 
Sbjct: 296 DFLRDEQLRAEWDIL-------------SNGGPMQEMARIAK-------GH--QNGNSVS 333

Query: 522 VIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPID----EMFPDDG--- 574
           ++R    S  Q    +     L + C+    +A G  S +V+AP+D    ++  + G   
Sbjct: 334 LLRASAMSANQSSMLI-----LQETCT----DASG--SIVVYAPVDIPAMQLVMNGGDST 382

Query: 575 --PLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVL 632
              LLPSGF I+      PD P   + H+T                           S+L
Sbjct: 383 YVALLPSGFAIL------PDGPSIGSEHKT-------------------------GGSLL 411

Query: 633 TIAFQFPFESNLQDNVATMARQYVRSVIS-SVQRVAMAI 670
           T+AFQ    S     +   + + V ++IS +++++  A+
Sbjct: 412 TVAFQILVNSQPTAKLTVESVETVNNLISCTIKKIKTAL 450


>gi|356531784|ref|XP_003534456.1| PREDICTED: homeobox-leucine zipper protein HAT7-like [Glycine max]
          Length = 270

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 11/133 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ALE+ +    K    R+ QL +       ++P+Q+ +WFQNRR R K +
Sbjct: 80  KKKRLNLEQVKALEKSFDLGNKLEPERKVQLAKAL----GLQPRQVAIWFQNRRARWKTK 135

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQV----SQLVCENGYMKQQLRTAPATTD 141
                 + + ++  A+   N +L  EN +LQ ++    S+  CE G M  +  T  + ++
Sbjct: 136 HLEKEYEVLKKQFEAVKADNDVLKVENQKLQAELQAVKSRDWCEAGMMSHKKETEGSWSN 195

Query: 142 ASCDSVVTTPQHS 154
            S +S+     HS
Sbjct: 196 GSDNSLEINLDHS 208


>gi|242048284|ref|XP_002461888.1| hypothetical protein SORBIDRAFT_02g009860 [Sorghum bicolor]
 gi|241925265|gb|EER98409.1| hypothetical protein SORBIDRAFT_02g009860 [Sorghum bicolor]
          Length = 730

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 150/661 (22%), Positives = 238/661 (36%), Gaps = 158/661 (23%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC-------- 83
           R+T EQ+  L   Y +   P    R+ L  +      +E KQ++ WFQN+R         
Sbjct: 44  RHTPEQIRELISAYQQNHHPDEPTRRALGEKI----GLEAKQVQYWFQNQRSQMQAKAME 99

Query: 84  ---REKQRKEASRLQ--------------------TVNRKLTAMNKLLMEENDRLQKQ-- 118
              +  QR+ A+ L                     TV  +L A N  L+ EN RL+    
Sbjct: 100 HNSKAAQRQNAALLAENASLRQAMLKRSCFTCGGATVPAELLAENHRLLMENARLRGDYM 159

Query: 119 -----VSQLVCENGYMKQ-QLRTAPATTDASCDSVVT-TPQHSLRDANNPAGLLSIAEET 171
                ++Q+V ++       ++  PA       +VV    + + + A+    L   AE  
Sbjct: 160 RATELLNQIVLQHSAAPGPAVQRPPAVVFRRPGAVVLPVDEGASKQADRDTRLRRHAEAA 219

Query: 172 LAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGV-----------AARACGLVS 220
           + +F+  AT     W+      P PD   +  +                  A R  G+V 
Sbjct: 220 MDQFVMLATSGEPLWL------PTPDGEALSYLGYQKKATLPMHHGGLIMEATRETGIVR 273

Query: 221 LEPTKIAEILKDRPSW---FRDC-RSLEVFTMFPAGNAGT-IELLYTQAYAPTTLAPARD 275
                +   L D   W   F D   S+       AG+ G+ I+L+  + +  +     R 
Sbjct: 274 AFVADLIVKLTDAKRWCEMFPDVVASVTTNGAITAGDFGSCIQLMNAELWVQSPRLHNRR 333

Query: 276 FWTLRYTTTLDNGSLVVCERSLSGSGAGPNP--------ASAAQFVRAEMLPSGCLIRPC 327
              LRY   +  G   V + S+ G   GP+         A A       +LPSGCLI   
Sbjct: 334 INFLRYNKRVAEGQWAVMDVSVDGI-LGPSAGRRTTDATAVANNTTGCRLLPSGCLIEDM 392

Query: 328 DGGGSIIHI--VDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVY--------- 376
             G     I  V H   +   VP + RPL  S K       +A    +  Y         
Sbjct: 393 GKGNDYCKITWVVHAEYDETMVPTLFRPLLRSGKAFGAHRWLASLQSQYEYLTILHSSQV 452

Query: 377 -------------GLGRQPAVLRTFSQRLSRGFNDAVNG-------FNDDGWSLMTCDGA 416
                         +G++   +   ++R+   F  AV+G        N   W        
Sbjct: 453 PRGDKDNTVAAISSMGKRG--ILELAKRMMAVFYSAVSGPVTQTSTSNLYEWP---ASAG 507

Query: 417 EDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFL--REHRSEWA 474
            D     ++   + T   P  S+A L  +L A  ++ L N PP L+ ++L   + R EW 
Sbjct: 508 TDARRTDDAAVRMVTWKKP-GSVADL--VLSASTTVWLPNTPPQLVFQYLCDGQRRGEW- 563

Query: 475 DFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQED 534
             +V A   A  +  S A         TG     PL     H   + V+    +S    D
Sbjct: 564 --DVFANGTAVAELCSVA---------TG-----PL-----HGNAVSVL----YSNVTTD 598

Query: 535 AFVSRDIHLL-QICSGVDENAVGACSELVFAPIDEMF----PDDGP-----LLPSGFRII 584
              S+ + +L Q C+    + V      V+AP++E F     + G      L+PSGF ++
Sbjct: 599 GTDSKKVLMLQQACTDASRSMV------VYAPVEEDFMRAVMNGGDHASVFLMPSGFAVL 652

Query: 585 P 585
           P
Sbjct: 653 P 653


>gi|293332723|ref|NP_001170002.1| uncharacterized protein LOC100383907 [Zea mays]
 gi|224032821|gb|ACN35486.1| unknown [Zea mays]
          Length = 418

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 142/377 (37%), Gaps = 96/377 (25%)

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPAS-------------- 308
           Q ++P  L  + +F  LRYT  +  G   V + S+ G   GP P S              
Sbjct: 6   QVHSPRLLNRSINF--LRYTKRVAEGRWAVMDVSVDGI-LGP-PGSRVADAAAAAAAANG 61

Query: 309 ----AAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQR 364
                A +    +LPSGCL+     G   +  V H   +  +VP + RPL+ S K +   
Sbjct: 62  VTLVPAWYTGCRLLPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPLFRSGKALGAH 121

Query: 365 MTIAET-----------SGEVVYGLGRQPAVLRT--------FSQRLSRGFNDAVNG--- 402
             +A             S +V  G     A + +         +QR+   F  AV+G   
Sbjct: 122 RWLASLQRQCEFLAVLHSSQVSRGGDNTAAAISSMGKRGVLELAQRMVADFYSAVSGPVT 181

Query: 403 ---FNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPP 459
               + D W      GA     AV         S    ++A L  +L A  ++ L N PP
Sbjct: 182 QPSSSIDEWYGSAGAGARRTDTAVRMVT-----SKKAGTVADL--VLSASTTVWLPNTPP 234

Query: 460 ALLVRFLRE--HRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHE 517
            L+ R+LR+   R EW  F   + +   L +                   +P GH   + 
Sbjct: 235 QLVFRYLRDDQRRGEWDAFFASSAAVTELCS-------------------VPTGHL--NG 273

Query: 518 ELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDE------MFP 571
             + V+    +S   +     + + L + C+        +CS +V+AP++E      M  
Sbjct: 274 NAVSVL----YSNVTDGTDRKKTLILQEACTD------ASCSMVVYAPVEEDSMRAVMNG 323

Query: 572 DDGP---LLPSGFRIIP 585
            D     LLPSGF ++P
Sbjct: 324 GDHASVFLLPSGFAVLP 340


>gi|334188232|ref|NP_199499.3| homeobox-leucine zipper protein HDG5 [Arabidopsis thaliana]
 gi|322510124|sp|Q9FJS2.3|HDG5_ARATH RecName: Full=Homeobox-leucine zipper protein HDG5; AltName:
           Full=HD-ZIP protein HDG5; AltName: Full=Homeodomain
           GLABRA 2-like protein 5; AltName: Full=Homeodomain
           transcription factor HDG5; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 5
 gi|332008060|gb|AED95443.1| homeobox-leucine zipper protein HDG5 [Arabidopsis thaliana]
          Length = 826

 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 8/96 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E ++ E P P   +R++L  E      ++P+Q+K WFQNRR + K +
Sbjct: 114 RYHRHTNRQIQEMEALFKENPHPDDKQRKRLSAEL----GLKPRQVKFWFQNRRTQMKAQ 169

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
           ++ +     N  L A N  L  EN  LQ ++  L C
Sbjct: 170 QDRNE----NVMLRAENDNLKSENCHLQAELRCLSC 201


>gi|414585329|tpg|DAA35900.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 683

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 88/425 (20%), Positives = 158/425 (37%), Gaps = 82/425 (19%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQ 263
           A+R   +V +    + EIL D   +            +LEV +   AGN  G ++++  +
Sbjct: 219 ASRDSSVVIMTHASLVEILMDVNQYATVFSSIVSRAATLEVLSTGVAGNYNGALQVMSVE 278

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P RD + +RY     +G+  V + SL  S            ++    PSGCL
Sbjct: 279 FQVPSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDTS----------SVLKCRRRPSGCL 328

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  SV  + + L +S      R  +                
Sbjct: 329 IQEMPNGYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERLASVMAS 388

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GA+DV   V 
Sbjct: 389 NIPTSDIGVITSTEGRKS--MLKLAERMVTSFCGGVTASAAHQWTTLSGSGADDV--RVM 444

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAA 484
           + KS+     P        GI+   A+     + P  +  FLR+  S             
Sbjct: 445 TRKSVDDPGRPP-------GIVLNAATSFWLPITPKRVFDFLRDESSRSEARTRAPTHTQ 497

Query: 485 SLKAGSYAYPGMRPTR------------FTGSQIIMPLGHTI---EHEELLEVIRLEGHS 529
                 +  P   P               +   ++  + H     +H   + ++R+   +
Sbjct: 498 FFFNREHVLPSYEPPFLFFFFLFLQWDILSNGGVVQEMAHIANGRDHGNCVSLLRVNQST 557

Query: 530 LAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSG 580
            + +    S  + L + C+    +A G  S +++AP+D +          PD   LLPSG
Sbjct: 558 NSTQ----SNMLILQESCT----DASG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSG 607

Query: 581 FRIIP 585
           F I+P
Sbjct: 608 FAILP 612


>gi|356570812|ref|XP_003553578.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Glycine max]
          Length = 214

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 15/136 (11%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T  Q+E LER + E  K    R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 57  KKKRLTNNQIELLERSFQEEIKLDPERKMKLSREL----GLQPRQIAVWFQNRRTRWK-- 110

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC----ENGYMKQQLRTAPATTDASC 144
             A +L+ +   L     ++  E  +LQ++V +L      + GY  Q+       T+ S 
Sbjct: 111 --AKQLEHLYDMLKHQYDVVSNEKQKLQEEVIKLKAMLSKQQGYWTQKF---GGYTEISG 165

Query: 145 DSVVTTPQHSLRDANN 160
           +  V +    LR  +N
Sbjct: 166 EETVESTSEGLRGKSN 181


>gi|197116169|dbj|BAG68833.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 83/388 (21%), Positives = 143/388 (36%), Gaps = 78/388 (20%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 86
           R+TA Q + LE  Y E P P+  +R +L +      N+EPKQ+K WFQN+R + K     
Sbjct: 48  RHTAYQTQELENFYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNKRNQTKINSDR 103

Query: 87  -----QRKEASRLQTVNRKLTA----------------------MNKLLMEENDRLQKQV 119
                 R++  RL     +L +                      + KL++ EN  L++++
Sbjct: 104 LENITLREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLIV-ENTILEREI 162

Query: 120 SQLVCENGYMKQQLRTAPAT---TDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFL 176
           +QL  +      Q+  +P+      +S   +  TP+  L       G     E+  + FL
Sbjct: 163 NQLYSKIPSRPNQMLVSPSQPPHCSSSNPGINATPELGL------GGGTRTTEKERSMFL 216

Query: 177 SKATGTAVDWVQMPGMK------PGPDSVGIFAISQSCSGV-------------AARACG 217
             A     + +++  M           S  +  I++                  A+R  G
Sbjct: 217 DLAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHVVEASREIG 276

Query: 218 LVSLEPTKIAEILKDRPSWFRDCRSL----EVFTMFPAGNAGT----IELLYTQAYAPTT 269
           LV +    + +   D   W      +        + P G+ GT    ++L+  +    + 
Sbjct: 277 LVPMTCLTLVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVISP 336

Query: 270 LAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDG 329
           L P R    LRY   L +G  VV + +        NP   +       LPSG  I     
Sbjct: 337 LVPKRQVTFLRYCKELRHGLWVVVDVT-----PDQNPTLLSDGGSINRLPSGLFIEDMAN 391

Query: 330 GGSIIHIVDHLNLEAWSVPEVLRPLYES 357
           G S +  ++        +  + +PL  S
Sbjct: 392 GYSQVTWIEQAEYNESHIHPLYQPLIGS 419


>gi|9759430|dbj|BAB10227.1| homeobox protein [Arabidopsis thaliana]
          Length = 783

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 8/96 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E ++ E P P   +R++L  E      ++P+Q+K WFQNRR + K +
Sbjct: 114 RYHRHTNRQIQEMEALFKENPHPDDKQRKRLSAEL----GLKPRQVKFWFQNRRTQMKAQ 169

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
           ++ +     N  L A N  L  EN  LQ ++  L C
Sbjct: 170 QDRNE----NVMLRAENDNLKSENCHLQAELRCLSC 201


>gi|197116201|dbj|BAG68840.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kawasakiana]
          Length = 690

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 83/388 (21%), Positives = 143/388 (36%), Gaps = 78/388 (20%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 86
           R+TA Q + LE  Y E P P+  +R +L +      N+EPKQ+K WFQN+R + K     
Sbjct: 48  RHTAYQTQELENFYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNKRNQMKINSDR 103

Query: 87  -----QRKEASRLQTVNRKLTA----------------------MNKLLMEENDRLQKQV 119
                 R++  RL     +L +                      + KL++ EN  L++++
Sbjct: 104 LENITLREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLIV-ENTILEREI 162

Query: 120 SQLVCENGYMKQQLRTAPAT---TDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFL 176
           +QL  +      Q+  +P+      +S   +  TP+  L       G     E+  + FL
Sbjct: 163 NQLYSKIPSRPNQMLVSPSQPPHCSSSNPGINATPELGL------GGGTRTTEKERSMFL 216

Query: 177 SKATGTAVDWVQMPGMK------PGPDSVGIFAISQSCSGV-------------AARACG 217
             A     + +++  M           S  +  I++                  A+R  G
Sbjct: 217 DLAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHVVEASREIG 276

Query: 218 LVSLEPTKIAEILKDRPSWFRDCRSL----EVFTMFPAGNAGT----IELLYTQAYAPTT 269
           LV +    + +   D   W      +        + P G+ GT    ++L+  +    + 
Sbjct: 277 LVPMTCLTLVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVISP 336

Query: 270 LAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDG 329
           L P R    LRY   L +G  VV + +        NP   +       LPSG  I     
Sbjct: 337 LVPKRQVTFLRYCKELRHGLWVVVDVT-----PDQNPTLLSDGGSINRLPSGLFIEDMAN 391

Query: 330 GGSIIHIVDHLNLEAWSVPEVLRPLYES 357
           G S +  ++        +  + +PL  S
Sbjct: 392 GYSQVTWIEQAEYNESHIHPLYQPLIGS 419


>gi|75106330|sp|Q5JMF3.1|ROC9_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC9; AltName:
           Full=GLABRA 2-like homeobox protein 9; AltName:
           Full=HD-ZIP protein ROC9; AltName: Full=Homeodomain
           transcription factor ROC9; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 9
 gi|57900354|dbj|BAD87344.1| putative homeodomain protein [Oryza sativa Japonica Group]
          Length = 816

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 119/310 (38%), Gaps = 45/310 (14%)

Query: 155 LRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD------SVGIFAISQSC 208
           LR  ++   +L +A   L E +   +     WV+  G++ G D       V +F      
Sbjct: 300 LRHDDDKPRILELATRALDELVGMCSSGEPVWVR--GVETGRDILNYDEYVRLFRRDHGG 357

Query: 209 SG--------VAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFT-MFPAG 252
           SG         A+R CGLV L+   +     D   W            +LE+ +     G
Sbjct: 358 SGDQMAGWTVEASRECGLVYLDTMHLVHTFMDVDKWKDLFPTMISKAATLEMISNREDDG 417

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
             G ++L+Y +    T + P R+ +  RY   L      + + S   S  G + +SA   
Sbjct: 418 RDGVLQLMYAELQTLTPMVPTRELYFARYCKKLAAERWAIVDVSFDESETGVHASSA--- 474

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSG 372
           VR    PSGCLI   + G   +  V+H      +V     PLY            A T+ 
Sbjct: 475 VRCWKNPSGCLIEEQNNGRCKMTWVEHTRCRRCTVA----PLYR-----------AVTAS 519

Query: 373 EVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI-IAVNSTKSLST 431
            V +G  R  A L+   +R+   F  A N    D   + T  G   V+ +A   T SL  
Sbjct: 520 GVAFGARRWVAALQLQCERMV--FAVATNVPTRDSTGVSTLAGRRSVLKLAHRMTSSLCR 577

Query: 432 ASNPTNSLAF 441
            +  +  +A+
Sbjct: 578 TTGGSCDMAW 587



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+TAEQ+  +E ++ E P P   +RQQ+ ++      +  +Q+K WFQNRR + K   
Sbjct: 99  YHRHTAEQIRIMEALFKESPHPDERQRQQVSKQL----GLSARQVKFWFQNRRTQIKAVQ 154

Query: 87  QRKEASRLQTVNRKLTAMNKLLME 110
           +R E S L++   KL   ++ + E
Sbjct: 155 ERHENSLLKSELEKLQDEHRAMRE 178


>gi|197116203|dbj|BAG68841.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kawasakiana]
          Length = 689

 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 131/644 (20%), Positives = 235/644 (36%), Gaps = 155/644 (24%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           R+TA Q + LE VY E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 48  RHTAYQTQELENVYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 101

Query: 92  SRLQTV------NRKLTAMNKL---------------------------LMEENDRLQKQ 118
            RL+ +      +R L   ++L                           L+ EN  L+++
Sbjct: 102 DRLENIILREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLIVENTILERE 161

Query: 119 VSQLVCENGYMKQQLRTAPAT---TDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEF 175
           ++QL  +      Q+  +P+      +S   +  TP+  L       G     E+  + F
Sbjct: 162 INQLYSKIPSRPNQMLVSPSQPPHCSSSNPGINATPELGL------GGGTRTTEKERSMF 215

Query: 176 LSKATGTAVDWVQMPGMK------PGPDSVGIFAISQSCSGV-------------AARAC 216
           L  A     + +++  M           S  +  I++                  A+R  
Sbjct: 216 LDLAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHVVEASREI 275

Query: 217 GLVSLEPTKIAEILKDRPSWFRDCRSL----EVFTMFPAGNAGT----IELLYTQAYAPT 268
           GLV +    + +   D   W     S+        + P G+ GT    ++ +  +    +
Sbjct: 276 GLVPMTCLTLVKTFMDMEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVIS 335

Query: 269 TLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCD 328
            L P R    LRY   L +G  VV + +        NP +   +  +  LPSG  I    
Sbjct: 336 PLVPKRQVTFLRYCKELRHGLWVVVDVT-----PDQNP-TLLSYGGSNRLPSGLFIADMA 389

Query: 329 GGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA--------QRM-----TIAETS-GEV 374
            G S +  ++        +  + +PL  S   +         QR      T++ T+  E+
Sbjct: 390 NGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLAEI 449

Query: 375 VYGL-GRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTAS 433
             GL  +  A +   +QR++  +   +   + D W  +  +      +A N +  +    
Sbjct: 450 SPGLSAKGAAEVVKLAQRMTLNYYTGITSSSGDKWEKIQVEN-----VAPNMSFMIRKNV 504

Query: 434 NPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE--HRSEWADFNVDAYSAASLKAGSY 491
           N     +   GIL + A+ +   V    L  FL     R EW     +     +++    
Sbjct: 505 NEPGEHS---GILLSAATSVWFPVNQKTLFAFLSNPSFRHEWDTLTNNTRMEETIR---- 557

Query: 492 AYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVD 551
                             +     H  ++ ++++ G+     D  V ++I          
Sbjct: 558 ------------------IQKAKRHGNIISLLKIVGN-----DTLVLQEIW--------- 585

Query: 552 ENAVGACSELVFAPIDEMFP----------DDGPLLPSGFRIIP 585
            +A GA   +V+AP+ E  P          D   LLPSGF I+P
Sbjct: 586 NDASGAM--VVYAPV-ETNPMEWVKRGGNSDSVQLLPSGFSIMP 626


>gi|302761652|ref|XP_002964248.1| hypothetical protein SELMODRAFT_81609 [Selaginella moellendorffii]
 gi|302815769|ref|XP_002989565.1| hypothetical protein SELMODRAFT_129907 [Selaginella moellendorffii]
 gi|300142743|gb|EFJ09441.1| hypothetical protein SELMODRAFT_129907 [Selaginella moellendorffii]
 gi|300167977|gb|EFJ34581.1| hypothetical protein SELMODRAFT_81609 [Selaginella moellendorffii]
          Length = 127

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 9/112 (8%)

Query: 14  ESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           +   G+  +H ++  +  R + +QV++LER + +  K    R+ QL +E     +++P+Q
Sbjct: 12  DDDPGAGQQHHIEKKR--RLSVDQVKSLERHFEQDNKLEPERKLQLAKEL----SLQPRQ 65

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMN---KLLMEENDRLQKQVSQL 122
           + VWFQNRR R K ++       +   L A+    K L++E   L+ +V Q+
Sbjct: 66  VAVWFQNRRARWKTKQLEKDYDALKENLDALRGDYKSLLKEKQELEAEVCQI 117


>gi|356498166|ref|XP_003517924.1| PREDICTED: uncharacterized protein LOC100783970 [Glycine max]
          Length = 345

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 8/133 (6%)

Query: 28  GKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 87
           GK  R T+EQV+ LER +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 85  GKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKEL----GLQPRQVAIWFQNRRARFKT 140

Query: 88  R---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +   K+   L+    +L    + L++END+L+ +V+ L  +   ++ + +   +   +S 
Sbjct: 141 KQLEKDYGVLKASYDRLKGDYESLVQENDKLKAEVNSLESK-LILRDKEKEENSDDKSSP 199

Query: 145 DSVVTTPQHSLRD 157
           D  V +  H+ ++
Sbjct: 200 DDAVNSSPHNNKE 212


>gi|197116195|dbj|BAG68837.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. gemmifera]
          Length = 689

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 131/644 (20%), Positives = 235/644 (36%), Gaps = 155/644 (24%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           R+TA Q + LE VY E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 48  RHTAYQTQELENVYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 101

Query: 92  SRLQTV------NRKLTAMNKL---------------------------LMEENDRLQKQ 118
            RL+ +      +R L   ++L                           L+ EN  L+++
Sbjct: 102 DRLENIILREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLIVENTILERE 161

Query: 119 VSQLVCENGYMKQQLRTAPAT---TDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEF 175
           ++QL  +      Q+  +P+      +S   +  TP+  L       G     E+  + F
Sbjct: 162 INQLYSKIPSRPNQMLVSPSQPPHCSSSNPGINATPELGL------GGGTRTTEKERSMF 215

Query: 176 LSKATGTAVDWVQMPGMK------PGPDSVGIFAISQSCSGV-------------AARAC 216
           L  A     + +++  M           S  +  I++                  A+R  
Sbjct: 216 LDLAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHVVEASREI 275

Query: 217 GLVSLEPTKIAEILKDRPSWFRDCRSL----EVFTMFPAGNAGT----IELLYTQAYAPT 268
           GLV +    + +   D   W     S+        + P G+ GT    ++ +  +    +
Sbjct: 276 GLVPMTCLTLVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVIS 335

Query: 269 TLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCD 328
            L P R    LRY   L +G  VV + +        NP +   +  +  LPSG  I    
Sbjct: 336 PLVPKRQVTFLRYCKELRHGLWVVVDVT-----PDQNP-TLLSYGGSNRLPSGLFIADMA 389

Query: 329 GGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA--------QRM-----TIAETS-GEV 374
            G S +  ++        +  + +PL  S   +         QR      T++ T+  E+
Sbjct: 390 NGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLAEI 449

Query: 375 VYGL-GRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTAS 433
             GL  +  A +   +QR++  +   +   + D W  +  +      +A N +  +    
Sbjct: 450 SPGLSAKGAAEVVKLAQRMTLNYYTGITSSSGDKWEKIQVEN-----VAPNMSFMIRKNV 504

Query: 434 NPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE--HRSEWADFNVDAYSAASLKAGSY 491
           N     +   GIL + A+ +   V    L  FL     R EW     +     +++    
Sbjct: 505 NEPGEHS---GILLSAATSVWFPVNQKTLFAFLSNPSFRHEWDTLTNNTRMEETIR---- 557

Query: 492 AYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVD 551
                             +     H  ++ ++++ G+     D  V ++I          
Sbjct: 558 ------------------IQKAKRHGNIISLLKIVGN-----DTLVLQEIW--------- 585

Query: 552 ENAVGACSELVFAPIDEMFP----------DDGPLLPSGFRIIP 585
            +A GA   +V+AP+ E  P          D   LLPSGF I+P
Sbjct: 586 NDASGAM--VVYAPV-ETNPMEWVKRGGNSDSVQLLPSGFSIMP 626


>gi|197116167|dbj|BAG68832.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 83/388 (21%), Positives = 143/388 (36%), Gaps = 78/388 (20%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 86
           R+TA Q + LE  Y E P P+  +R +L +      N+EPKQ+K WFQN+R + K     
Sbjct: 37  RHTAYQTQELENFYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNKRNQIKINSDR 92

Query: 87  -----QRKEASRLQTVNRKLTA----------------------MNKLLMEENDRLQKQV 119
                 R++  RL     +L +                      + KL++ EN  L++++
Sbjct: 93  LENITLREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLIV-ENTILEREI 151

Query: 120 SQLVCENGYMKQQLRTAPAT---TDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFL 176
           +QL  +      Q+  +P+      +S   +  TP+  L       G     E+  + FL
Sbjct: 152 NQLYSKIPSRPNQMLVSPSQPPHCSSSNPGINATPELGL------GGGTRTTEKERSMFL 205

Query: 177 SKATGTAVDWVQMPGMK------PGPDSVGIFAISQSCSGV-------------AARACG 217
             A     + +++  M           S  +  I++                  A+R  G
Sbjct: 206 DLAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHVVEASREIG 265

Query: 218 LVSLEPTKIAEILKDRPSWFRDCRSL----EVFTMFPAGNAGT----IELLYTQAYAPTT 269
           LV +    + +   D   W      +        + P G+ GT    ++L+  +    + 
Sbjct: 266 LVPMTCLTLVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVISP 325

Query: 270 LAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDG 329
           L P R    LRY   L +G  VV + +        NP   +       LPSG  I     
Sbjct: 326 LVPKRQVTFLRYCKELRHGLWVVVDVT-----PDQNPTLLSDGGSINRLPSGLFIEDMAN 380

Query: 330 GGSIIHIVDHLNLEAWSVPEVLRPLYES 357
           G S +  ++        +  + +PL  S
Sbjct: 381 GYSQVTWIEQAEYNESHIHPLYQPLIGS 408


>gi|345566896|gb|EGX49835.1| hypothetical protein AOL_s00076g633 [Arthrobotrys oligospora ATCC
           24927]
          Length = 615

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 10/74 (13%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE----- 90
           EQ  ALER+Y +CPKP+   ++ L        N+ P ++ +WFQNRR R K+ KE     
Sbjct: 87  EQTLALERLYQQCPKPNQATKRDLAHAI----NLSPTRVNIWFQNRRHRAKKHKEIQEAK 142

Query: 91  -ASRLQTVNRKLTA 103
            A  L+T  R+  A
Sbjct: 143 MAQILETAGRERMA 156


>gi|197116193|dbj|BAG68836.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. gemmifera]
          Length = 689

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 131/644 (20%), Positives = 235/644 (36%), Gaps = 155/644 (24%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           R+TA Q + LE VY E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 48  RHTAYQTQELENVYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 101

Query: 92  SRLQTV------NRKLTAMNKL---------------------------LMEENDRLQKQ 118
            RL+ +      +R L   ++L                           L+ EN  L+++
Sbjct: 102 DRLENIILREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLIVENTILERE 161

Query: 119 VSQLVCENGYMKQQLRTAPAT---TDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEF 175
           ++QL  +      Q+  +P+      +S   +  TP+  L       G     E+  + F
Sbjct: 162 INQLYSKIPSRPNQMLVSPSQPPHCSSSNPGINATPELGL------GGGTRTTEKERSMF 215

Query: 176 LSKATGTAVDWVQMPGMK------PGPDSVGIFAISQSCSGV-------------AARAC 216
           L  A     + +++  M           S  +  I++                  A+R  
Sbjct: 216 LDLAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHVVEASREI 275

Query: 217 GLVSLEPTKIAEILKDRPSWFRDCRSL----EVFTMFPAGNAGT----IELLYTQAYAPT 268
           GLV +    + +   D   W     S+        + P G+ GT    ++ +  +    +
Sbjct: 276 GLVPMTCLTLVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVIS 335

Query: 269 TLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCD 328
            L P R    LRY   L +G  VV + +        NP +   +  +  LPSG  I    
Sbjct: 336 PLVPKRQVTFLRYCKELRHGLWVVVDVT-----PDQNP-TLLSYGGSNRLPSGLFIADMA 389

Query: 329 GGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA--------QRM-----TIAETS-GEV 374
            G S +  ++        +  + +PL  S   +         QR      T++ T+  E+
Sbjct: 390 NGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLAEI 449

Query: 375 VYGL-GRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTAS 433
             GL  +  A +   +QR++  +   +   + D W  +  +      +A N +  +    
Sbjct: 450 SPGLSAKGAAEVVKLAQRMTLNYYTGITSSSGDKWEKIQIEN-----VAPNMSFMIRKNV 504

Query: 434 NPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE--HRSEWADFNVDAYSAASLKAGSY 491
           N     +   GIL + A+ +   V    L  FL     R EW     +     +++    
Sbjct: 505 NEPGEHS---GILLSAATSVWFPVNQKTLFAFLSNPSFRHEWDTLTNNTRMEETIR---- 557

Query: 492 AYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVD 551
                             +     H  ++ ++++ G+     D  V ++I          
Sbjct: 558 ------------------IQKAKRHGNIISLLKIVGN-----DTLVLQEIW--------- 585

Query: 552 ENAVGACSELVFAPIDEMFP----------DDGPLLPSGFRIIP 585
            +A GA   +V+AP+ E  P          D   LLPSGF I+P
Sbjct: 586 NDASGAM--VVYAPV-ETNPMEWVKRGGNSDSVQLLPSGFSIMP 626


>gi|255540907|ref|XP_002511518.1| homeobox protein, putative [Ricinus communis]
 gi|223550633|gb|EEF52120.1| homeobox protein, putative [Ricinus communis]
          Length = 319

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)

Query: 12  QRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEP 71
             E++   ++++     K  R T +QV+ LE+ +    K    R+ QL ++      ++P
Sbjct: 74  HEENADDDLDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKLQLAKDL----GLQP 129

Query: 72  KQIKVWFQNRRCREKQR---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGY 128
           +Q+ +WFQNRR R K +   K+   LQT    L A    L++E DRL+ +V+ L+ +   
Sbjct: 130 RQVAIWFQNRRARWKTKQMEKDYDVLQTSYNSLKADYDALLQEKDRLKAEVN-LLTDKLL 188

Query: 129 MKQQLRTAPATTDASC 144
           +K++ +     +D   
Sbjct: 189 LKEKEKVNSEVSDKDA 204


>gi|4006894|emb|CAB16824.1| homeodomain protein [Arabidopsis thaliana]
 gi|7270622|emb|CAB80340.1| homeodomain protein [Arabidopsis thaliana]
          Length = 217

 Score = 56.2 bits (134), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 17/132 (12%)

Query: 7   QQQQQQRESSSGSINKHQLDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           +Q +++R+ + GS+      NG + +   T EQV  LE  + +  K  S R+ +L  E  
Sbjct: 32  KQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAEL- 90

Query: 65  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
               ++P+Q+ VWFQNRR R K +    RL+    KL   +  ++ +  RL+ +V QL  
Sbjct: 91  ---GLDPRQVAVWFQNRRARWKNK----RLEEEYNKLKNSHDNVVVDKCRLESEVIQL-- 141

Query: 125 ENGYMKQQLRTA 136
                K+QL  A
Sbjct: 142 -----KEQLYDA 148


>gi|115451237|ref|NP_001049219.1| Os03g0188900 [Oryza sativa Japonica Group]
 gi|122247443|sp|Q10QP3.1|HOX13_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX13; AltName:
           Full=HD-ZIP protein HOX13; AltName: Full=Homeodomain
           transcription factor HOX13; AltName: Full=OsHox13
 gi|108706589|gb|ABF94384.1| Homeobox domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|113547690|dbj|BAF11133.1| Os03g0188900 [Oryza sativa Japonica Group]
 gi|215715349|dbj|BAG95100.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215740668|dbj|BAG97324.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 311

 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV ALER +    K    R+ ++ R+      ++P+Q+ VWFQNRR R K +
Sbjct: 72  KKRRLALEQVRALERSFDTDNKLDPDRKARIARDL----GLQPRQVAVWFQNRRARWKTK 127

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDAS 143
           +    L+     L A +  L  + D L++    L  E   ++++L T PA T AS
Sbjct: 128 Q----LERDFAALRARHDALRADCDALRRDKDALAAEIRELREKLPTKPADTAAS 178


>gi|145354375|ref|NP_195392.2| homeobox protein 40 [Arabidopsis thaliana]
 gi|322510138|sp|O23208.3|ATB40_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-40; AltName:
           Full=HD-ZIP protein ATHB-40; AltName: Full=Homeodomain
           transcription factor ATHB-40
 gi|332661296|gb|AEE86696.1| homeobox protein 40 [Arabidopsis thaliana]
          Length = 216

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 17/132 (12%)

Query: 7   QQQQQQRESSSGSINKHQLDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           +Q +++R+ + GS+      NG + +   T EQV  LE  + +  K  S R+ +L  E  
Sbjct: 31  KQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAEL- 89

Query: 65  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
               ++P+Q+ VWFQNRR R K +    RL+    KL   +  ++ +  RL+ +V QL  
Sbjct: 90  ---GLDPRQVAVWFQNRRARWKNK----RLEEEYNKLKNSHDNVVVDKCRLESEVIQL-- 140

Query: 125 ENGYMKQQLRTA 136
                K+QL  A
Sbjct: 141 -----KEQLYDA 147


>gi|125549829|gb|EAY95651.1| hypothetical protein OsI_17516 [Oryza sativa Indica Group]
          Length = 162

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 4/61 (6%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 104 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKVK 159

Query: 89  K 89
           K
Sbjct: 160 K 160


>gi|449440459|ref|XP_004138002.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Cucumis sativus]
          Length = 240

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 8/94 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R ++EQ+E+LER + E  K    R+Q+L +E      ++P+QI VWFQNRR R K +
Sbjct: 66  KKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKEL----GLQPRQIAVWFQNRRARWKAK 121

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           +      T+ ++  A+++    E  +LQ++V +L
Sbjct: 122 QLEHLYDTLKQEFDAISR----EKHKLQEEVMKL 151


>gi|351727955|ref|NP_001238458.1| homeodomain-leucine zipper protein 57 [Glycine max]
 gi|6018089|gb|AAF01765.1|AF184278_1 homeodomain-leucine zipper protein 57 [Glycine max]
          Length = 288

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 15/162 (9%)

Query: 28  GKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 87
           GK  R T+EQV+ LER +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 28  GKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKEL----GLQPRQVAIWFQNRRARFKT 83

Query: 88  R---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +   K+   L+    +L +  + L++END+L+ +V+ L  E+  + +       + D S 
Sbjct: 84  KQLEKDYGVLKASYDRLKSDYESLVQENDKLKAEVNSL--ESKLILRDKEKEENSDDKSS 141

Query: 145 --DSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAV 184
             D+V ++  H+ ++   P  LL I++       S+  GT V
Sbjct: 142 PDDAVNSSSPHNNKE---PMDLLIISKNATTTTTSE-NGTKV 179


>gi|242072556|ref|XP_002446214.1| hypothetical protein SORBIDRAFT_06g004510 [Sorghum bicolor]
 gi|241937397|gb|EES10542.1| hypothetical protein SORBIDRAFT_06g004510 [Sorghum bicolor]
          Length = 735

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 157/758 (20%), Positives = 274/758 (36%), Gaps = 187/758 (24%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---- 87
           R+   Q++ LE  +  C  P+   RQ+L  +      +E +Q+K WFQNRR + K     
Sbjct: 52  RFAMHQIQELEAQFRVCSHPNPDVRQELATKI----GLEERQVKFWFQNRRSQMKASLDL 107

Query: 88  -----------------------------RKEASRLQTVNRKLT---------------- 102
                                        R+E ++L+  N +L                 
Sbjct: 108 TTILILLCRLFWLLCLSLVKAYGDDNKGIRQELAKLKAENEELKQRRQNPICFMCTNPIA 167

Query: 103 ---AMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA----PATTDASCDSVVTTPQHSL 155
              + N  L+ +N RL+    + V    +M + +R A    P +   S D  + +   ++
Sbjct: 168 AIQSENWRLLNDNTRLK---DEYVRSKAHMDRLIREAAAEHPPSAMRSSDHHLASAHMNM 224

Query: 156 ----------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAIS 205
                        N  A L S A   + EF+  AT     WV     K G        I 
Sbjct: 225 DPVALTGNCRTTTNLEATLTSHAARAMKEFVMLATKGEPMWVLA---KDGEKLNHQEYIL 281

Query: 206 QSCSGVAARACGLVSLEPTKIAEILK----DRPSWFRDCRSLEVFTMFPAGNAGTIELLY 261
           Q+  G+          E T+  +++K    D  S   D  ++E++               
Sbjct: 282 QTFPGLLGLCPQGFVEEATRETDMIKGTAMDLVSILTDVMNVELWVQ------------- 328

Query: 262 TQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG-SGAGPNPASAAQFVRAEMLPS 320
               +P  L  +  F  LR++  + NG   V + S+ G  G     +S +      +LPS
Sbjct: 329 ----SPRLLNRSVKF--LRFSKMMANGRWAVVDVSVDGIYGVEQEGSSTSYTTGCRLLPS 382

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVY---- 376
           GCL+    GG   +  V H   +  +VP + RPL +S + +     +     +  Y    
Sbjct: 383 GCLLEDMSGGYCKVTWVVHAEYDETTVPFLFRPLLQSGQALGACRWLRSLQKQCEYITVL 442

Query: 377 ------------------GLGRQPAVLRTFSQRLSRGFNDAVNG-------FNDDGWSLM 411
                             G+GR+  +    + ++   F  AV+G        + + W L+
Sbjct: 443 PSSHVLPSSSSSSAISTLGVGRRSVM--ELAGQMMVSFYAAVSGPVIVPATSSVNEWRLV 500

Query: 412 T-CDGAEDV-----IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRF 465
           +  +G E V     ++  N    +    + T        +L A  ++ L   PP  +  +
Sbjct: 501 SNGNGTERVEAFVRLVTWNCADIMPGEPSVT--------VLSATTTVWLPGTPPLCVFEY 552

Query: 466 L--REHRSEWADFNVDAYSAASLK--AGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLE 521
           L   + R EW D +VDA     L   A S   PG          ++ P     +  E  +
Sbjct: 553 LCDLQRRGEW-DTHVDAGEVKELSSVATSPQLPGNNVV-----SVLEPTTVVTDETESSK 606

Query: 522 VIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGF 581
           V+ L+           S D+    +   + E +      L+   +D     +  +LPSGF
Sbjct: 607 VLILQE---------TSTDVSCFLVVYSLIEES------LMRGIMDGRERSNIFVLPSGF 651

Query: 582 RIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFE 641
            I+P D       D   A+             ++N A  DS + ++  S++++AFQ    
Sbjct: 652 AILP-DGHGKAHADHTAAN-------------SSNSAPIDSRN-NNAGSIVSVAFQTLLP 696

Query: 642 SNLQDNV-ATMARQYVR-SVISSVQRVAMAICPSGLSP 677
            NL  N+  T A +  R  V  ++ ++  A+  S + P
Sbjct: 697 GNLSSNLDNTGAFEDARLQVCHAITKIKAAVGASNIIP 734


>gi|357486581|ref|XP_003613578.1| Homeobox-leucine zipper protein ATHB-16 [Medicago truncatula]
 gi|355514913|gb|AES96536.1| Homeobox-leucine zipper protein ATHB-16 [Medicago truncatula]
          Length = 324

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 20/167 (11%)

Query: 9   QQQQRESSSGSINK----HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           QQ ++E + G  +     HQ   GK  R ++EQV+ LE+ +    K    R+ QL +E  
Sbjct: 65  QQLEKEENCGDEDYEACYHQ--QGKKRRLSSEQVQFLEKSFEVENKLEPDRKVQLAKEL- 121

Query: 65  ILSNIEPKQIKVWFQNRRCREKQR---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQ 121
               ++P+Q+ +WFQNRR R K +   K+   L+     L      L++END+L+++V+ 
Sbjct: 122 ---GLQPRQVAIWFQNRRARFKTKQLEKDYGTLKASFDSLKDDYDNLLQENDKLKEEVNS 178

Query: 122 LVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIA 168
           L  +N  + +  +    + D S    + +P +++    +P  ++SI 
Sbjct: 179 L--KNKLIPRD-KEKVNSEDKSSPEAINSPHNNI----DPMDIISIT 218


>gi|405977546|gb|EKC41989.1| LIM/homeobox protein Lhx3 [Crassostrea gigas]
          Length = 432

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 8/78 (10%)

Query: 20  INKHQLDNGKY---VRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKV 76
           IN++ +D          TA+Q+EAL+R Y+E PKP+   R+QL  E    + ++ + ++V
Sbjct: 204 INEYDIDAANKRPRTTITAKQLEALKRAYNESPKPARHVREQLSAE----TGLDMRVVQV 259

Query: 77  WFQNRRCREKQ-RKEASR 93
           WFQNRR +EK+ +K+A R
Sbjct: 260 WFQNRRAKEKRLKKDAGR 277


>gi|449521341|ref|XP_004167688.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like,
           partial [Cucumis sativus]
          Length = 230

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 8/94 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R ++EQ+E+LER + E  K    R+Q+L +E      ++P+QI VWFQNRR R K +
Sbjct: 66  KKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKEL----GLQPRQIAVWFQNRRARWKAK 121

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           +      T+ ++  A+++    E  +LQ++V +L
Sbjct: 122 QLEHLYDTLKQEFDAISR----EKHKLQEEVMKL 151


>gi|443711321|gb|ELU05149.1| hypothetical protein CAPTEDRAFT_228137 [Capitella teleta]
          Length = 506

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 44/61 (72%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+EAL+R Y+E PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 280 TAKQLEALKRAYNESPKPARHVREQLSAE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 335

Query: 93  R 93
           R
Sbjct: 336 R 336


>gi|8778268|gb|AAF79277.1|AC023279_26 F12K21.1 [Arabidopsis thaliana]
          Length = 164

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 8/100 (8%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+     ++  QV+ LE  + ECP P   +R+QL  E     N++ KQIK WFQNRR +
Sbjct: 15  IDSNNRRHHSNHQVQRLEAFFHECPHPDDSQRRQLGNEL----NLKHKQIKFWFQNRRTQ 70

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            +   E +     N  L   N  +   N+ ++K +  ++C
Sbjct: 71  ARIHNEKAD----NIALRVENMKIRCVNEAMEKALETVLC 106


>gi|308080696|ref|NP_001183865.1| uncharacterized protein LOC100502458 [Zea mays]
 gi|238015104|gb|ACR38587.1| unknown [Zea mays]
 gi|408690316|gb|AFU81618.1| HB-type transcription factor, partial [Zea mays subsp. mays]
 gi|413956877|gb|AFW89526.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 344

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 18/145 (12%)

Query: 14  ESSSGSINKHQL-DNG---------KYVRYTAEQVEALERVYSECPKPSSLRRQQLIREC 63
           E+S G+ N+ ++ D+G         K  R   EQV  LE+ +    K  + R+ QL R  
Sbjct: 90  EASCGATNEDEVSDDGSLQAVGPGEKKRRLNVEQVRTLEKNFELGNKLEAERKLQLARAL 149

Query: 64  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAM---NKLLMEENDRLQKQVS 120
                ++P+Q+ +WFQNRR R K ++       + R+L A+   N  L+  N +LQ ++ 
Sbjct: 150 ----GLQPRQVAIWFQNRRARWKTKQLEKDYDALRRQLDAVKADNDALLSHNKKLQAEIL 205

Query: 121 QLVC-ENGYMKQQLRTAPATTDASC 144
            L   E      +L      T+ASC
Sbjct: 206 ALKGREAAGGSSELINLNKETEASC 230


>gi|187471154|sp|A2XDD6.2|HOX13_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX13; AltName:
           Full=HD-ZIP protein HOX13; AltName: Full=Homeodomain
           transcription factor HOX13; AltName: Full=OsHox13
 gi|218192229|gb|EEC74656.1| hypothetical protein OsI_10318 [Oryza sativa Indica Group]
          Length = 312

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 15/119 (12%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV ALER +    K    R+ ++ R+      ++P+Q+ VWFQNRR R K +
Sbjct: 72  KKRRLALEQVRALERSFDTDNKLDPDRKARIARDL----GLQPRQVAVWFQNRRARWKTK 127

Query: 89  KEASRLQTVNRKLTAM----NKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDAS 143
           +       + R   A+    N  L  + D L++    L  E   ++++L T PA T AS
Sbjct: 128 Q-------LERDFAALRAQHNDALRADCDALRRDKDALAAEIRELREKLPTKPADTAAS 179


>gi|449439053|ref|XP_004137302.1| PREDICTED: homeobox-leucine zipper protein ATHB-7-like [Cucumis
           sativus]
          Length = 208

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 15/132 (11%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           R++ EQ++ LE +Y      S L  +Q+I+    L  ++P+QI +WFQN+R R K +++ 
Sbjct: 5   RFSDEQIKTLEAIYYL--TESKLNSRQVIKLATKLG-LQPQQITIWFQNKRARWKSKEKQ 61

Query: 92  SRLQTVNRK---LTAMNKLLMEENDRLQKQVSQLV-----CENGYMKQQLRTAPATTDAS 143
              +++  K   L +  + L EEN+ L  Q+ +L      CE   ++  L+    TT  +
Sbjct: 62  ENFKSLRAKCDDLASQFETLQEENNSLLSQLQKLTVLQGPCEGAIIRMTLKK---TTHET 118

Query: 144 CDSVVTTPQHSL 155
            +   T P H+L
Sbjct: 119 HEKPKTLP-HAL 129


>gi|242036775|ref|XP_002465782.1| hypothetical protein SORBIDRAFT_01g045740 [Sorghum bicolor]
 gi|241919636|gb|EER92780.1| hypothetical protein SORBIDRAFT_01g045740 [Sorghum bicolor]
          Length = 355

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 7/119 (5%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 124 KKRRLNVEQVRTLEKNFELGNKLEPERKLQLARAL----GLQPRQVAIWFQNRRARWKTK 179

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +       + R+L A+   N  L+  N +LQ ++  L         +L      T+ASC
Sbjct: 180 QLEKDYDALKRQLDAVKADNDALLSHNKKLQAEILALKGGREAGSSELINLNKETEASC 238


>gi|222636242|gb|EEE66374.1| hypothetical protein OsJ_22692 [Oryza sativa Japonica Group]
          Length = 91

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 36/46 (78%)

Query: 632 LTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSP 677
           +TIAFQF FES+LQ +V  MA+QY+ S+ISSVQR+A+ +  S L P
Sbjct: 1   MTIAFQFAFESHLQGSVPAMAQQYMCSIISSVQRIAVVLSSSRLVP 46


>gi|197116171|dbj|BAG68842.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kamchatica]
          Length = 689

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 130/644 (20%), Positives = 234/644 (36%), Gaps = 155/644 (24%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           R+TA Q + LE  Y E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 48  RHTAYQTQELENFYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 101

Query: 92  SRLQTV------NRKLTAMNKL---------------------------LMEENDRLQKQ 118
            RL+ +      +R L   ++L                           L+ EN  L+++
Sbjct: 102 DRLENITLREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLIVENTILERE 161

Query: 119 VSQLVCENGYMKQQLRTAPAT---TDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEF 175
           ++QL  +      Q+  +P+      +S   +  TP+  L       G     E+  + F
Sbjct: 162 INQLYSKIPSRPNQMLVSPSQPPHCSSSNPGINATPELGL------GGGTRTTEKERSMF 215

Query: 176 LSKATGTAVDWVQMPGMK------PGPDSVGIFAISQSCSGV-------------AARAC 216
           L  A     + +++  M           S  +  I++                  A+R  
Sbjct: 216 LDLAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHVVEASREI 275

Query: 217 GLVSLEPTKIAEILKDRPSWFRDCRSL----EVFTMFPAGNAGT----IELLYTQAYAPT 268
           GLV +    + +   D   W     S+        + P G+ GT    ++ +  +    +
Sbjct: 276 GLVPMTCLTLVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVIS 335

Query: 269 TLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCD 328
            L P R    LRY   L +G  VV + +        NP +   +  +  LPSG  I    
Sbjct: 336 PLVPRRQVTFLRYCKELRHGLWVVVDVT-----PDQNP-TLLSYGGSNRLPSGLFIEDMA 389

Query: 329 GGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA--------QRM-----TIAETS-GEV 374
            G S +  ++        +  + +PL  S   +         QR      T++ T+  E+
Sbjct: 390 NGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLAEI 449

Query: 375 VYGL-GRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTAS 433
             GL  +  A +   +QR++  +   +   + D W  +  +      +A N +  +    
Sbjct: 450 SPGLSAKGAAEVVKLAQRMTLNYYTGITSSSGDKWEKIQVEN-----VAPNMSFMIRKNV 504

Query: 434 NPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE--HRSEWADFNVDAYSAASLKAGSY 491
           N     +   GIL + A+ +   V    L  FL     R EW     +     +++    
Sbjct: 505 NEPGEHS---GILLSAATSVWFPVNQKTLFAFLSNPSFRHEWDTLTNNTRMEETIR---- 557

Query: 492 AYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVD 551
                             +     H  ++ ++++ G+     D  V ++I          
Sbjct: 558 ------------------IQKAKRHGNIISLLKIVGN-----DTLVLQEIW--------- 585

Query: 552 ENAVGACSELVFAPIDEMFP----------DDGPLLPSGFRIIP 585
            +A GA   +V+AP+ E  P          D   LLPSGF I+P
Sbjct: 586 NDASGAM--VVYAPV-ETNPMEWVKRGGNSDSVQLLPSGFSIMP 626


>gi|187609463|sp|A3BYC1.2|HOX25_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX25; AltName:
           Full=HD-ZIP protein HOX25; AltName: Full=Homeodomain
           transcription factor HOX25; AltName: Full=OsHox25
          Length = 320

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 8/92 (8%)

Query: 32  RYTAEQVEALERVYSECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK- 89
           R TAEQV ALER + E   K    R+ +L R       I P+Q+ VWFQNRR R K ++ 
Sbjct: 85  RLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWKTKQL 140

Query: 90  --EASRLQTVNRKLTAMNKLLMEENDRLQKQV 119
             +  RL+  + +L A    L  +N+ L+ QV
Sbjct: 141 ELDFDRLRAAHDELLAGRTALAADNESLRSQV 172


>gi|357464079|ref|XP_003602321.1| Homeobox-leucine zipper protein ATHB-7 [Medicago truncatula]
 gi|355491369|gb|AES72572.1| Homeobox-leucine zipper protein ATHB-7 [Medicago truncatula]
          Length = 244

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 89
           R++ EQ+ +LE ++    K    ++ QL R+      ++P+Q+ +WFQNRR R K ++  
Sbjct: 40  RFSDEQIRSLECIFESESKLEPRKKMQLARDL----GLQPRQVAIWFQNRRARWKSKRIE 95

Query: 90  -EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
            E  +L+     L +  + L EE + LQ +V +L
Sbjct: 96  QEYRKLKDEYDNLASKFQCLKEEKESLQSEVQKL 129


>gi|326516084|dbj|BAJ88065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 296

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 32  RYTAEQVEALERVYSECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR-- 88
           R TAEQV ALER + E   K    R+ +L R       I P+Q+ VWFQNRR R K +  
Sbjct: 82  RLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWKAKQL 137

Query: 89  -KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
            ++   L+  + +L A    L+ +N  L+ QV+ L 
Sbjct: 138 EQDFDALRAAHAELLAGRDALLADNHHLRSQVTSLT 173


>gi|357153991|ref|XP_003576633.1| PREDICTED: homeobox-leucine zipper protein HOX4-like [Brachypodium
           distachyon]
          Length = 277

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 12/136 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R +AEQV ALER +    K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 63  KKRRLSAEQVRALERSFEVENKLEPERKARLARDL----GLQPRQVAVWFQNRRARWKTK 118

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
           +    L+     L      L  ++D L++    L+ E   +K +L    A   AS  SV 
Sbjct: 119 Q----LERDYNALRHSYDALRLDHDALRRDKDALLAEIKELKGKLGDEDAA--ASFTSVK 172

Query: 149 TTPQHSLRDANNPAGL 164
             P  S  D   PAG+
Sbjct: 173 EEPAAS--DGPPPAGM 186


>gi|356505302|ref|XP_003521430.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Glycine max]
          Length = 218

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 14/133 (10%)

Query: 5   IQQQQQQQRESSSGSINK--HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRE 62
           ++ +Q    E+  GS+       +  K  R T  Q+E LER + E  K    R+ +L RE
Sbjct: 32  VEVKQAALMETGEGSVPALMDSRNKEKKKRLTNNQIELLERSFQEEIKLDPERKMKLSRE 91

Query: 63  CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
                 ++P+QI VWFQNRR R K ++    L+ +   L     ++  E  +LQ++V +L
Sbjct: 92  L----GLQPRQIAVWFQNRRTRWKTKQ----LEHLYDVLKHQYDVVSNEKQKLQEEVMKL 143

Query: 123 VC----ENGYMKQ 131
                 E G+ KQ
Sbjct: 144 KAMLSKEQGFGKQ 156


>gi|297726893|ref|NP_001175810.1| Os09g0379600 [Oryza sativa Japonica Group]
 gi|255678854|dbj|BAH94538.1| Os09g0379600 [Oryza sativa Japonica Group]
          Length = 286

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 8/92 (8%)

Query: 32  RYTAEQVEALERVYSECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK- 89
           R TAEQV ALER + E   K    R+ +L R       I P+Q+ VWFQNRR R K ++ 
Sbjct: 51  RLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWKTKQL 106

Query: 90  --EASRLQTVNRKLTAMNKLLMEENDRLQKQV 119
             +  RL+  + +L A    L  +N+ L+ QV
Sbjct: 107 ELDFDRLRAAHDELLAGRTALAADNESLRSQV 138


>gi|356528154|ref|XP_003532670.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 793

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 8/93 (8%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           R+  ++V  LE ++ EC  P+ +RR+Q+  E      ++P+Q+K WFQN++   +   E 
Sbjct: 23  RHGRDKVARLEEIFKECTHPNEVRRRQIGEEL----GLDPEQVKFWFQNKKTHIRTINE- 77

Query: 92  SRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            RL T   +L   N+ +  EN+++++ +  L C
Sbjct: 78  -RLDTDALRLE--NERIQSENNKMRETLENLSC 107


>gi|413934246|gb|AFW68797.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 348

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           R + EQV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K ++  
Sbjct: 122 RLSVEQVRTLERSFEVANKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTKQLE 177

Query: 92  SRLQTVNRKLTAM---NKLLMEENDRLQKQVSQLVCENG 127
                + R+L A    N  L+  N +LQ ++  L    G
Sbjct: 178 KDYDALRRQLDAARAENDALLSHNKKLQTEIMALKGGGG 216


>gi|340722532|ref|XP_003399658.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus terrestris]
          Length = 486

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 5/88 (5%)

Query: 7   QQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPIL 66
           +Q + +  +  GSI+  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    
Sbjct: 229 EQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQD---- 284

Query: 67  SNIEPKQIKVWFQNRRCREKQ-RKEASR 93
           + ++ + ++VWFQNRR +EK+ +K+A R
Sbjct: 285 TGLDMRVVQVWFQNRRAKEKRLKKDAGR 312


>gi|302398829|gb|ADL36709.1| HD domain class transcription factor [Malus x domestica]
          Length = 324

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 28  GKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 87
           GK  R TA+QV+ LE+ +    K    R+  L ++      ++P+Q+ +WFQNRR R K 
Sbjct: 88  GKKRRLTADQVQFLEKSFDVENKLEPERKVLLAKDL----GLQPRQVAIWFQNRRARWKT 143

Query: 88  R---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDAS 143
           +   K+   LQ     L A  + L +END+L+ +V+ ++ +  ++K++ R     +D +
Sbjct: 144 KQLEKDYEELQANYNNLKANCESLSKENDKLKAEVT-VLSDKLHLKEKERGNSELSDTN 201


>gi|350606310|ref|NP_001234250.1| homeobox [Solanum lycopersicum]
 gi|1161575|emb|CAA64417.1| homeobox [Solanum lycopersicum]
          Length = 323

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 17/153 (11%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T  QV+ LE+ + E  K    R+ QL +E      ++P+QI +WFQNRR R K +
Sbjct: 90  KKRRLTDNQVQFLEKSFGEENKLEPERKVQLAKEL----GLQPRQIAIWFQNRRARWKTK 145

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL-----VCENGYMKQQLRTAPATT 140
              K+   L+     L +    L++E + L+ +V +L     + E G  +  LR     +
Sbjct: 146 QLEKDYDELRNRYDTLKSNYNNLLKEKEDLRTEVFRLTGKLFIKEKGNGQLDLRDEHKHS 205

Query: 141 DASCDSVVTTPQHSLRDANNPAGLLSIAEETLA 173
           +A     V  P      +N PA ++   +E L+
Sbjct: 206 NALAKETVVDPM-----SNVPALVVKHQQEDLS 233


>gi|171687871|ref|XP_001908876.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943897|emb|CAP69549.1| unnamed protein product [Podospora anserina S mat+]
          Length = 646

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 3   MVIQQQQQQQRESSSGSINKHQLDNGK-YVRYTAEQVEALERVYSECPKPSSLRRQQLIR 61
           MV   QQ QQR    G    H     +   R   ++VE LER +++ PKP+S  +++L  
Sbjct: 40  MVAYYQQHQQRAVMMGQGGMHMSKQTEPKPRLAKDEVELLEREFNKNPKPNSSTKRELAE 99

Query: 62  ECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQ 121
           +      +E  +I  WFQNRR +EKQ ++ +  +    +    ++ + E  D+ Q  V++
Sbjct: 100 QM----GVEVPRINNWFQNRRAKEKQMRKTAEFEAQQAREKEASE-VKESGDQEQGTVTE 154

Query: 122 L 122
            
Sbjct: 155 F 155


>gi|312283295|dbj|BAJ34513.1| unnamed protein product [Thellungiella halophila]
          Length = 120

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQ++ LE+ +    K  S R+ +L R       ++P+QI +WFQNRR R K +
Sbjct: 28  KKRRLNMEQLKTLEKNFEIGNKLESDRKLELARAL----GLQPRQIAIWFQNRRARSKTK 83

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQV 119
           +       + R+  ++   N++L  +N +LQ QV
Sbjct: 84  QLERDYDALKRQFESLKDENEILQTQNQKLQAQV 117


>gi|357153545|ref|XP_003576486.1| PREDICTED: homeobox-leucine zipper protein HOX25-like [Brachypodium
           distachyon]
          Length = 296

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 9/111 (8%)

Query: 20  INKHQLDNGKYVR-YTAEQVEALERVYSECP-KPSSLRRQQLIRECPILSNIEPKQIKVW 77
           + +H    G+  R  TAEQV ALER + E   K    R+ +L R       + P+Q+ VW
Sbjct: 76  LEEHAPGTGRTKRRLTAEQVRALERSFEEEKRKLEPERKSELARRL----GMAPRQVAVW 131

Query: 78  FQNRRCREKQR---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
           FQNRR R K +   ++   L+  +  L A    L+ +ND L+ QV  L  E
Sbjct: 132 FQNRRARWKAKQLERDFDALRAAHDHLLASRDALLADNDSLRSQVISLTEE 182


>gi|326493446|dbj|BAJ85184.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 317

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 8/113 (7%)

Query: 28  GKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 87
           GK  R   EQV ALER +    K    R+ ++ R+      + P+Q+ VWFQNRR R K 
Sbjct: 62  GKKRRLALEQVRALERSFETDNKLDPERKARIARDL----GLHPRQVAVWFQNRRARWKT 117

Query: 88  RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT 140
           ++    L+     L A +  L  + D L++    L  E   ++++L T P T 
Sbjct: 118 KQ----LERDFNALRARHDALRADCDALRRDKDALAAEIHELREKLSTKPETA 166


>gi|86129716|gb|ABC86567.1| homeodomain-leucine zipper transcription factor TaHDZipI-2
           [Triticum aestivum]
          Length = 333

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 8/124 (6%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           QL   K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR 
Sbjct: 113 QLGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARAL----GLQPRQVAIWFQNRRA 168

Query: 84  REKQRKEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT 140
           R K ++       + R+  A+   N  L+  N +LQ ++  L  E      +L      T
Sbjct: 169 RWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLK-ECREAASELINLNKET 227

Query: 141 DASC 144
           +ASC
Sbjct: 228 EASC 231


>gi|197116197|dbj|BAG68838.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. halleri]
          Length = 671

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 82/389 (21%), Positives = 145/389 (37%), Gaps = 81/389 (20%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           R+TA Q + LE  Y E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 30  RHTAYQTQELENFYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 83

Query: 92  SRLQTV------NRKLTAMNKL---------------------------LMEENDRLQKQ 118
            RL+ +      +R L   ++L                           L+ EN  L+++
Sbjct: 84  DRLENITLREDHDRLLLTQHQLRSAMLYCSCNICGRATNCGDIDYEVQKLIVENTILERE 143

Query: 119 VSQLVCENGYMKQQLRTAPAT---TDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEF 175
           ++QL  +      Q+  +P+      +S   +  TP+  L       G     E+  + F
Sbjct: 144 INQLYSKIPSRPNQMLVSPSQPPHCSSSNPGINATPELGL------GGGTRTTEKERSMF 197

Query: 176 LSKATGTAVDWVQMPGMK------PGPDSVGIFAISQSCSGV-------------AARAC 216
           L  A     + +++  M           S  +  I++                  A+R  
Sbjct: 198 LDLAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHVVEASREI 257

Query: 217 GLVSLEPTKIAEILKDRPSWFRDCRSL----EVFTMFPAGNAGT----IELLYTQAYAPT 268
           GLV +    + +   D   W     S+        + P G+ GT    ++ +  +    +
Sbjct: 258 GLVPMTCLTLVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVIS 317

Query: 269 TLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCD 328
            L P R    LRY   L +G  VV + +        NP +   +  +  LPSG  I    
Sbjct: 318 PLVPKRQVTFLRYCKELRHGLWVVVDVT-----PDKNP-TLLSYGGSNRLPSGLFIADMA 371

Query: 329 GGGSIIHIVDHLNLEAWSVPEVLRPLYES 357
            G S +  ++        +  + +PL  S
Sbjct: 372 NGYSQVTWIEQAEYNESHIHPLYQPLIGS 400


>gi|414871481|tpg|DAA50038.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 363

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           R + +QV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K ++  
Sbjct: 135 RLSVDQVRTLERSFEVANKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTKQLE 190

Query: 92  SRLQTVNRKLTAM---NKLLMEENDRLQKQVSQL 122
                + R+L A    N  L+  N +LQ ++  L
Sbjct: 191 KDYDALRRQLDAARAENDALLSHNKKLQAEIMAL 224


>gi|357533773|gb|AET82940.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533775|gb|AET82941.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533777|gb|AET82942.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533779|gb|AET82943.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533781|gb|AET82944.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533783|gb|AET82945.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533785|gb|AET82946.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533787|gb|AET82947.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533789|gb|AET82948.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533791|gb|AET82949.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533793|gb|AET82950.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533795|gb|AET82951.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533797|gb|AET82952.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533799|gb|AET82953.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533801|gb|AET82954.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533805|gb|AET82956.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533807|gb|AET82957.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533809|gb|AET82958.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533811|gb|AET82959.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533813|gb|AET82960.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533815|gb|AET82961.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533817|gb|AET82962.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533819|gb|AET82963.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533821|gb|AET82964.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533823|gb|AET82965.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533825|gb|AET82966.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533827|gb|AET82967.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533829|gb|AET82968.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533831|gb|AET82969.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533833|gb|AET82970.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533835|gb|AET82971.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533837|gb|AET82972.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533839|gb|AET82973.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533841|gb|AET82974.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533843|gb|AET82975.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533845|gb|AET82976.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533847|gb|AET82977.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533849|gb|AET82978.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533851|gb|AET82979.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533853|gb|AET82980.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533857|gb|AET82982.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533859|gb|AET82983.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533861|gb|AET82984.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533863|gb|AET82985.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533865|gb|AET82986.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533867|gb|AET82987.1| hypothetical protein, partial [Pinus contorta var. murrayana]
 gi|357533869|gb|AET82988.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533871|gb|AET82989.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533875|gb|AET82991.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533877|gb|AET82992.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533879|gb|AET82993.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533883|gb|AET82995.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533885|gb|AET82996.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533887|gb|AET82997.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533889|gb|AET82998.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533891|gb|AET82999.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533893|gb|AET83000.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533895|gb|AET83001.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533897|gb|AET83002.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533899|gb|AET83003.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533903|gb|AET83005.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533905|gb|AET83006.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533907|gb|AET83007.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533909|gb|AET83008.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533911|gb|AET83009.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533913|gb|AET83010.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533915|gb|AET83011.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533917|gb|AET83012.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533919|gb|AET83013.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533921|gb|AET83014.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533923|gb|AET83015.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533925|gb|AET83016.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533927|gb|AET83017.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533929|gb|AET83018.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533931|gb|AET83019.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533933|gb|AET83020.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533935|gb|AET83021.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533937|gb|AET83022.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533939|gb|AET83023.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533941|gb|AET83024.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533943|gb|AET83025.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533945|gb|AET83026.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533947|gb|AET83027.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533949|gb|AET83028.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533951|gb|AET83029.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533953|gb|AET83030.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533955|gb|AET83031.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533957|gb|AET83032.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533959|gb|AET83033.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533961|gb|AET83034.1| hypothetical protein, partial [Pinus contorta var. murrayana]
          Length = 146

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV ALE+ +    K    ++ QL +       ++P+QI VWFQNRR R K +
Sbjct: 34  KKRRLTLEQVRALEKNFEMANKLEPEKKMQLAKAL----GLQPRQIAVWFQNRRARWKTK 89

Query: 89  KEASRLQTVNRKLTAMNK---LLMEENDRLQKQVSQL 122
           +       +     ++ +    LMEEN+ LQ  + +L
Sbjct: 90  QLEKDFNILKHDYDSLKQNYDNLMEENNNLQAMIERL 126


>gi|356512547|ref|XP_003524980.1| PREDICTED: uncharacterized protein LOC100799054 [Glycine max]
          Length = 331

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 14/113 (12%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R +A QV+ LE+ + E  K    R+ +L ++      ++P+Q+ +WFQNRR R K +
Sbjct: 83  KKRRLSASQVQFLEKSFEEENKLEPERKTKLAKDL----GLQPRQVAIWFQNRRARWKNK 138

Query: 89  KEASRLQTVNRKLTAMN---KLLMEENDRLQKQVSQLV-------CENGYMKQ 131
           +     +T++    ++      L++E D+L+ +V+ L         + G+MKQ
Sbjct: 139 QLEKDYETLHASFESLKSNYDCLLKEKDKLKAEVASLTEKVLARGKQEGHMKQ 191


>gi|345493999|ref|XP_001603795.2| PREDICTED: LIM/homeobox protein Lhx3-like [Nasonia vitripennis]
          Length = 450

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 5/90 (5%)

Query: 7   QQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPIL 66
           +Q + +  +  GSI+  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    
Sbjct: 172 EQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNNSPKPARHVREQLSQD---- 227

Query: 67  SNIEPKQIKVWFQNRRCREKQ-RKEASRLQ 95
           + ++ + ++VWFQNRR +EK+ +K+A R +
Sbjct: 228 TGLDMRVVQVWFQNRRAKEKRLKKDAGRTR 257


>gi|75303608|sp|Q8S7W9.1|HOX21_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX21; AltName:
           Full=HD-ZIP protein HOX21; AltName: Full=Homeodomain
           transcription factor HOX21; AltName: Full=OsHox21
 gi|19071644|gb|AAL84311.1|AC073556_28 putative DNA-binding protein [Oryza sativa Japonica Group]
 gi|108706412|gb|ABF94207.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|108706413|gb|ABF94208.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 366

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 9/119 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 130 KKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRRARWKTK 185

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +       + R+L A+   N  L+  N +LQ ++  L         +L      T+ASC
Sbjct: 186 QLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREA--ASELINLNKETEASC 242


>gi|312283063|dbj|BAJ34397.1| unnamed protein product [Thellungiella halophila]
          Length = 295

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 12/132 (9%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 85  KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 140

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP----ATTDASC 144
           +      T+ R+  A    L  END LQ    +L  E   +K + +T        T+ SC
Sbjct: 141 QLEKDYDTLKRQFDA----LKAENDLLQTHNQKLQAEIMGLKNREQTESINLNKETEGSC 196

Query: 145 DSVVTTPQHSLR 156
            +       +LR
Sbjct: 197 SNRSDNSSDNLR 208


>gi|242039759|ref|XP_002467274.1| hypothetical protein SORBIDRAFT_01g022420 [Sorghum bicolor]
 gi|241921128|gb|EER94272.1| hypothetical protein SORBIDRAFT_01g022420 [Sorghum bicolor]
          Length = 362

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           R + EQV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K ++  
Sbjct: 124 RLSVEQVRTLERSFEVANKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTKQLE 179

Query: 92  SRLQTVNRKLTAM---NKLLMEENDRLQKQVSQL 122
                + R+L A    N  L+  N +LQ ++  L
Sbjct: 180 KDYDALRRQLDAARAENDTLLSHNKKLQAEIMAL 213


>gi|226528244|ref|NP_001151416.1| homeobox-leucine zipper protein HAT7 [Zea mays]
 gi|195646650|gb|ACG42793.1| homeobox-leucine zipper protein HAT7 [Zea mays]
          Length = 360

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           R + +QV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K ++  
Sbjct: 132 RXSVDQVRTLERSFEVANKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTKQLE 187

Query: 92  SRLQTVNRKLTAM---NKLLMEENDRLQKQVSQL 122
                + R+L A    N  L+  N +LQ ++  L
Sbjct: 188 KDYDALRRQLDAARAENDALLSHNKKLQAEIMAL 221


>gi|357486711|ref|XP_003613643.1| Homeobox-leucine zipper protein [Medicago truncatula]
 gi|355514978|gb|AES96601.1| Homeobox-leucine zipper protein [Medicago truncatula]
          Length = 182

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 7/98 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ LE+ +    K    R+ QL R      N++P+Q+ +WFQNRR R K +
Sbjct: 77  KKRRLNMEQVKTLEKSFELGNKLEPERKMQLARAL----NLQPRQVAIWFQNRRARWKTK 132

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQLV 123
           +       + R+  A+   N  L  +N +LQ +V   +
Sbjct: 133 QLEKDYDVLKRQYDAIKLDNDALQAQNQKLQAEVCSFL 170


>gi|358333778|dbj|GAA52242.1| LIM homeobox protein 3/4, partial [Clonorchis sinensis]
          Length = 405

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 10/84 (11%)

Query: 11  QQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           + RES   S NK           TA+Q+EAL+R Y+E PKP    R+QL  E    + ++
Sbjct: 106 KARESELDSANKR-----PRTTITAKQLEALKRAYNESPKPVRHVREQLSAE----TGLD 156

Query: 71  PKQIKVWFQNRRCREKQ-RKEASR 93
            + ++VWFQNRR +EK+ +K+A R
Sbjct: 157 MRVVQVWFQNRRAKEKRLKKDAGR 180


>gi|356531808|ref|XP_003534468.1| PREDICTED: homeobox-leucine zipper protein HAT3-like [Glycine max]
          Length = 229

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 10/127 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K +R T EQ   LE  + E    +  R+Q L  E     N++P+Q++VWFQNRR R K +
Sbjct: 69  KKLRLTKEQSMVLEETFKEHSTLNPKRKQALAEEL----NLKPRQVEVWFQNRRARTKLK 124

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
           +     + + R      + L EEN RL K+V +L       +  +   P TT   C S  
Sbjct: 125 QTEVDCEYLKR----CYENLTEENRRLHKEVQELRALKLSPQMYMHMNPPTTLTICPSCE 180

Query: 149 TTPQHSL 155
            T  HS 
Sbjct: 181 RT--HSF 185


>gi|357129503|ref|XP_003566401.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Brachypodium distachyon]
          Length = 375

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 8/93 (8%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           R+  EQ++ LE V+ +CP P    R  L +       +   Q+K WFQNRR  +K + E 
Sbjct: 70  RHRREQIQQLEAVFQQCPHPDEQLRLDLSKRL----GMGLLQVKFWFQNRRSAKKNKME- 124

Query: 92  SRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
              Q   +KL   N++L+ EN  ++ ++    C
Sbjct: 125 ---QQEGKKLREENEMLLAENKAMKAEIQSRTC 154


>gi|326492792|dbj|BAJ90252.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326496989|dbj|BAJ98521.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326504248|dbj|BAJ90956.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326528853|dbj|BAJ97448.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 331

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           QL   K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR 
Sbjct: 112 QLGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARAL----GLQPRQVAIWFQNRRA 167

Query: 84  REKQRKEASRLQTVNRKLTAM---NKLLMEENDRLQKQV 119
           R K ++       + R+  A+   N  L+  N +LQ ++
Sbjct: 168 RWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEI 206


>gi|259013450|ref|NP_001158468.1| ISL LIM homeobox 1 [Saccoglossus kowalevskii]
 gi|197320557|gb|ACH68440.1| islet homeobox protein [Saccoglossus kowalevskii]
          Length = 383

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 11/85 (12%)

Query: 17  SGSINKH---QLDNGKYVR----YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNI 69
           SGS+  H   Q  + K  R       +Q+  L   Y+  P+P +L ++QL      ++N+
Sbjct: 168 SGSLRPHVHKQETHHKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLTE----MTNL 223

Query: 70  EPKQIKVWFQNRRCREKQRKEASRL 94
            P+ I+VWFQN+RC++K+R +A +L
Sbjct: 224 SPRVIRVWFQNKRCKDKKRSQAMKL 248


>gi|15222452|ref|NP_177136.1| homeobox-leucine zipper protein ATHB-13 [Arabidopsis thaliana]
 gi|118573191|sp|Q8LC03.2|ATB13_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-13; AltName:
           Full=HD-ZIP protein ATHB-13; AltName: Full=Homeodomain
           transcription factor ATHB-13
 gi|6644295|gb|AAF20996.1|AF208044_1 homeodomain leucine-zipper protein ATHB13 [Arabidopsis thaliana]
 gi|12325190|gb|AAG52541.1|AC013289_8 homeobox gene 13 protein; 11736-10437 [Arabidopsis thaliana]
 gi|15982929|gb|AAL09811.1| At1g69780/T6C23_2 [Arabidopsis thaliana]
 gi|22137260|gb|AAM91475.1| At1g69780/T6C23_2 [Arabidopsis thaliana]
 gi|332196853|gb|AEE34974.1| homeobox-leucine zipper protein ATHB-13 [Arabidopsis thaliana]
          Length = 294

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 85  KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 140

Query: 89  KEASRLQTVNRK---LTAMNKLLMEENDRLQKQV 119
           +      T+ R+   L A N LL   N +LQ ++
Sbjct: 141 QLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEI 174


>gi|15218724|ref|NP_174724.1| homeobox-leucine zipper protein HDG10 [Arabidopsis thaliana]
 gi|75199883|sp|Q9S9Z0.1|HDG10_ARATH RecName: Full=Homeobox-leucine zipper protein HDG10; AltName:
           Full=HD-ZIP protein HDG10; AltName: Full=Homeodomain
           GLABRA 2-like protein 10; AltName: Full=Homeodomain
           transcription factor HDG10; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 10
 gi|5668786|gb|AAD46012.1|AC007894_10 Similar to gb|Z54356 HD-ZIP protein (Athb-10) from Arabidopsis
           thaliana and contains a PF|00046 homeobox domain
           [Arabidopsis thaliana]
 gi|332193611|gb|AEE31732.1| homeobox-leucine zipper protein HDG10 [Arabidopsis thaliana]
          Length = 708

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 8/100 (8%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+     ++  QV+ LE  + ECP P   +R+QL  E     N++ KQIK WFQNRR +
Sbjct: 15  IDSNNRRHHSNHQVQRLEAFFHECPHPDDSQRRQLGNEL----NLKHKQIKFWFQNRRTQ 70

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            +   E +     N  L   N  +   N+ ++K +  ++C
Sbjct: 71  ARIHNEKAD----NIALRVENMKIRCVNEAMEKALETVLC 106


>gi|351726046|ref|NP_001237881.1| HDZip I protein [Glycine max]
 gi|62752942|gb|AAX98670.1| HDZip I protein [Glycine max]
          Length = 245

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R + EQV+ LE+ + E  K    R   L +E      ++P+Q+ +WFQNRR R K +
Sbjct: 10  KKRRLSVEQVKFLEKSFDEENKLEPERMIWLAKEL----GLQPRQVAIWFQNRRARWKTK 65

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
              K+   LQT    L A    L+ E D+L+ +V++L
Sbjct: 66  QMEKDYDSLQTSYNDLKANYDNLLREKDKLKAEVARL 102


>gi|326493642|dbj|BAJ85282.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326502458|dbj|BAJ95292.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326509779|dbj|BAJ87105.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 267

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 12/136 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R +AEQV ALER +    K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 53  KKRRLSAEQVRALERSFEVENKLEPERKARLARDL----GLQPRQVAVWFQNRRARWKTK 108

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
           +    L+     L      L  ++D L++    L+ E   +K +L    A   AS  SV 
Sbjct: 109 Q----LERDYNALRHSYDALRLDHDALRRDKEALLAEIKDLKGKLGDEEAA--ASFTSVK 162

Query: 149 TTPQHSLRDANNPAGL 164
             P  S  D   PAG+
Sbjct: 163 EEPAAS--DGPPPAGM 176


>gi|21555784|gb|AAM63933.1| homeobox gene 13 protein [Arabidopsis thaliana]
          Length = 288

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 79  KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 134

Query: 89  KEASRLQTVNRK---LTAMNKLLMEENDRLQKQV 119
           +      T+ R+   L A N LL   N +LQ ++
Sbjct: 135 QLEKDYDTLKRQFHTLKAENDLLQTHNQKLQAEI 168


>gi|380012090|ref|XP_003690122.1| PREDICTED: LIM/homeobox protein Lhx3-like [Apis florea]
          Length = 465

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 5/88 (5%)

Query: 7   QQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPIL 66
           +Q + +  +  GSI+  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    
Sbjct: 208 EQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQD---- 263

Query: 67  SNIEPKQIKVWFQNRRCREKQ-RKEASR 93
           + ++ + ++VWFQNRR +EK+ +K+A R
Sbjct: 264 TGLDMRVVQVWFQNRRAKEKRLKKDAGR 291


>gi|187609454|sp|A2XD08.2|HOX21_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX21; AltName:
           Full=HD-ZIP protein HOX21; AltName: Full=Homeodomain
           transcription factor HOX21; AltName: Full=OsHox21
          Length = 360

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 9/119 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 124 KKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRRARWKTK 179

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +       + R+L A+   N  L+  N +LQ ++  L         +L      T+ASC
Sbjct: 180 QLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREA--ASELINLNKETEASC 236


>gi|315052996|ref|XP_003175872.1| hypothetical protein MGYG_03394 [Arthroderma gypseum CBS 118893]
 gi|311341187|gb|EFR00390.1| hypothetical protein MGYG_03394 [Arthroderma gypseum CBS 118893]
          Length = 717

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 11/130 (8%)

Query: 16  SSGSINKHQ--LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           ++G+I +++  ++N    R T EQVE LE  +   PKP+S  ++QL     + +++   +
Sbjct: 50  TTGAIEEYEEYVENLSRPRLTKEQVEILESQFQAHPKPNSNTKRQLA----LQTSLTLPR 105

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ-Q 132
           +  WFQNRR + KQ+K     +    K+ A  K +  E    ++Q S+   E    +Q Q
Sbjct: 106 VANWFQNRRAKAKQQKRQEEFE----KMQAKEKAMAAEGAGSKQQSSESSDEQQKSEQDQ 161

Query: 133 LRTAPATTDA 142
             + P  TDA
Sbjct: 162 KNSMPTPTDA 171


>gi|224053723|ref|XP_002297947.1| predicted protein [Populus trichocarpa]
 gi|222845205|gb|EEE82752.1| predicted protein [Populus trichocarpa]
          Length = 196

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 9/104 (8%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 88
           R+T EQ++ LE ++    +P S  +QQL  E      +EP+Q+ +WFQNRR R K +   
Sbjct: 19  RFTDEQIKFLEFMFESESRPESRVKQQLASEL----GLEPRQVAIWFQNRRARLKTKQIE 74

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           KE S L+     L +  + L  E   L  Q+ +L  +N ++KQ 
Sbjct: 75  KEYSILKASYDVLASSFESLKREKQSLIIQLHKL--KNRHVKQH 116


>gi|212720748|ref|NP_001132844.1| uncharacterized protein LOC100194336 [Zea mays]
 gi|194695554|gb|ACF81861.1| unknown [Zea mays]
 gi|219885465|gb|ACL53107.1| unknown [Zea mays]
 gi|408690270|gb|AFU81595.1| HB-type transcription factor, partial [Zea mays subsp. mays]
 gi|414589737|tpg|DAA40308.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 273

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 11/138 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R +AEQV ALER +    K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 51  KKRRLSAEQVRALERSFEVENKLEPERKARLARDL----GLQPRQVAVWFQNRRARWKTK 106

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
           +       + R   A    L  ++D L++    L+ E   +K +L        AS  SV 
Sbjct: 107 QLERDYAALRRSYDA----LRLDHDALRRDKDALLAEIRELKAKLGDDEDAA-ASFTSVK 161

Query: 149 TTPQHSLRDANNPAGLLS 166
             P  S  D   PAG+ S
Sbjct: 162 AEPAAS--DGPAPAGVGS 177


>gi|356568606|ref|XP_003552501.1| PREDICTED: homeobox-leucine zipper protein HAT3-like [Glycine max]
          Length = 289

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 8/122 (6%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K +R T EQ   LE  + E    +  R+Q L  E     N++P+Q++VWFQNRR R K +
Sbjct: 128 KKLRLTKEQSMVLEETFKEHNTLNPKRKQALAEEL----NLKPRQVEVWFQNRRARTKLK 183

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
           +     +     L    + L EEN RL K+V +L       +  +   P TT   C S  
Sbjct: 184 QTEVDCEY----LKKCCENLTEENRRLHKEVQELRALKLSPQMYMHMNPPTTLTMCPSCE 239

Query: 149 TT 150
            T
Sbjct: 240 RT 241


>gi|350418514|ref|XP_003491882.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus impatiens]
          Length = 463

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 5/88 (5%)

Query: 7   QQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPIL 66
           +Q + +  +  GSI+  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    
Sbjct: 206 EQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQD---- 261

Query: 67  SNIEPKQIKVWFQNRRCREKQ-RKEASR 93
           + ++ + ++VWFQNRR +EK+ +K+A R
Sbjct: 262 TGLDMRVVQVWFQNRRAKEKRLKKDAGR 289


>gi|383858395|ref|XP_003704687.1| PREDICTED: LIM/homeobox protein Lhx3-like [Megachile rotundata]
          Length = 463

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 5/88 (5%)

Query: 7   QQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPIL 66
           +Q + +  +  GSI+  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    
Sbjct: 206 EQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQD---- 261

Query: 67  SNIEPKQIKVWFQNRRCREKQ-RKEASR 93
           + ++ + ++VWFQNRR +EK+ +K+A R
Sbjct: 262 TGLDMRVVQVWFQNRRAKEKRLKKDAGR 289


>gi|108706411|gb|ABF94206.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 356

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 9/119 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 120 KKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRRARWKTK 175

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +       + R+L A+   N  L+  N +LQ ++  L         +L      T+ASC
Sbjct: 176 QLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREA--ASELINLNKETEASC 232


>gi|125574728|gb|EAZ16012.1| hypothetical protein OsJ_31457 [Oryza sativa Japonica Group]
          Length = 351

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R + EQV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 104 KKRRLSVEQVRTLERSFESGNKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTK 159

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQL 122
           +       + R+L A    N  L+  N +L  ++  L
Sbjct: 160 QLEKDFDALRRQLDAARAENDALLSLNSKLHAEIVAL 196


>gi|391865387|gb|EIT74671.1| homeobox transcription factor, putative [Aspergillus oryzae 3.042]
          Length = 710

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 20/99 (20%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 89
           R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  WFQNRR + KQ+K  
Sbjct: 71  RLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANWFQNRRAKAKQQKRQ 126

Query: 90  --------------EASRLQTVNRKLTAMNKLLMEENDR 114
                         EA+R++  N + +  N  + EE D+
Sbjct: 127 EEFERMQKAKTEAEEAARIKIENAEKSESNPDVKEETDK 165


>gi|356574388|ref|XP_003555330.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 729

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 18/112 (16%)

Query: 37  QVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQT 96
           Q+  +E  +  CP P   +R+ L RE      +EP QIK WFQN+R + K ++E    + 
Sbjct: 56  QISEMESFFKGCPHPDEKQRKALGREL----GLEPLQIKFWFQNKRTQVKTQQE----RY 107

Query: 97  VNRKLTAMNKLLMEENDRLQKQVSQLVC----------ENGYMKQQLRTAPA 138
            N  L   N  L  EN R +  ++  +C          E  + +QQLR   A
Sbjct: 108 ENNLLRVENDKLRAENRRYRNALANALCPSCGGPTALGEMSFDEQQLRIENA 159


>gi|297838751|ref|XP_002887257.1| ATHB13 [Arabidopsis lyrata subsp. lyrata]
 gi|297333098|gb|EFH63516.1| ATHB13 [Arabidopsis lyrata subsp. lyrata]
          Length = 293

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 85  KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 140

Query: 89  KEASRLQTVNRK---LTAMNKLLMEENDRLQKQV 119
           +      T+ R+   L A N LL   N +LQ ++
Sbjct: 141 QLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEI 174


>gi|238498468|ref|XP_002380469.1| homeobox  transcription factor, putative [Aspergillus flavus
           NRRL3357]
 gi|220693743|gb|EED50088.1| homeobox transcription factor, putative [Aspergillus flavus
           NRRL3357]
          Length = 710

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 20/99 (20%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 89
           R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  WFQNRR + KQ+K  
Sbjct: 71  RLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANWFQNRRAKAKQQKRQ 126

Query: 90  --------------EASRLQTVNRKLTAMNKLLMEENDR 114
                         EA+R++  N + +  N  + EE D+
Sbjct: 127 EEFERMQKAKTEAEEAARIKIENAEKSESNPDVKEETDK 165


>gi|15148920|gb|AAK84887.1|AF402606_1 homeodomain leucine zipper protein HDZ3 [Phaseolus vulgaris]
          Length = 224

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 10/109 (9%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 88
           R ++EQV  LE+ + E  K    R+ QL ++      ++P+Q+ VWFQNRR R K +   
Sbjct: 9   RLSSEQVHLLEKSFEEENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTKQLE 64

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP 137
           ++   L++    L +    LM++N++L+ +V  L   N  ++ Q +  P
Sbjct: 65  RDFDVLKSSYDTLLSSYDSLMKDNEKLKSEVVSL---NEKLQDQAKEVP 110


>gi|187609462|sp|A2YW03.2|HOX27_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX27; AltName:
           Full=HD-ZIP protein HOX27; AltName: Full=Homeodomain
           transcription factor HOX27; AltName: Full=OsHox27
          Length = 354

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 23/142 (16%)

Query: 12  QRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEP 71
           +R SS  S +       K +R + EQ   LE  + E    S+L  +Q +     L N+ P
Sbjct: 157 ERSSSRASDDDEGASARKKLRLSKEQSAFLEESFKEH---STLNPKQKVALAKQL-NLRP 212

Query: 72  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ 131
           +Q++VWFQNRR R K ++     + + R      + L EEN RL K++++L        +
Sbjct: 213 RQVEVWFQNRRARTKLKQTEVDCEYLKR----CCETLTEENRRLHKELAEL--------R 260

Query: 132 QLRTA-------PATTDASCDS 146
            L+TA       PATT + C S
Sbjct: 261 ALKTARPFYMHLPATTLSMCPS 282


>gi|328782955|ref|XP_394135.3| PREDICTED: LIM/homeobox protein Lhx3 [Apis mellifera]
          Length = 442

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 5/88 (5%)

Query: 7   QQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPIL 66
           +Q + +  +  GSI+  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    
Sbjct: 206 EQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQD---- 261

Query: 67  SNIEPKQIKVWFQNRRCREKQ-RKEASR 93
           + ++ + ++VWFQNRR +EK+ +K+A R
Sbjct: 262 TGLDMRVVQVWFQNRRAKEKRLKKDAGR 289


>gi|169781668|ref|XP_001825297.1| hypothetical protein AOR_1_602074 [Aspergillus oryzae RIB40]
 gi|83774039|dbj|BAE64164.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 710

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 20/99 (20%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 89
           R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  WFQNRR + KQ+K  
Sbjct: 71  RLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANWFQNRRAKAKQQKRQ 126

Query: 90  --------------EASRLQTVNRKLTAMNKLLMEENDR 114
                         EA+R++  N + +  N  + EE D+
Sbjct: 127 EEFERMQKAKTEAEEAARIKIENAEKSESNPDVKEETDK 165


>gi|242045018|ref|XP_002460380.1| hypothetical protein SORBIDRAFT_02g027300 [Sorghum bicolor]
 gi|241923757|gb|EER96901.1| hypothetical protein SORBIDRAFT_02g027300 [Sorghum bicolor]
          Length = 273

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 12/145 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R +AEQV ALER +    K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 51  KKRRLSAEQVRALERSFEVENKLEPERKARLARDL----GLQPRQVAVWFQNRRARWKTK 106

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
           +    L+     L      L  ++D L++    L+ E   +K +L    A   AS  SV 
Sbjct: 107 Q----LERDYAALRHSYDALRHDHDALRRDKDALLAEIKELKAKLGDEEAA--ASFTSVK 160

Query: 149 TTPQHSLRDANNPAGLLSIAEETLA 173
             P  S  D   P G+ S   ++ A
Sbjct: 161 AEPAAS--DGPPPVGVGSSESDSSA 183


>gi|357141673|ref|XP_003572308.1| PREDICTED: homeobox-leucine zipper protein HOX20-like [Brachypodium
           distachyon]
          Length = 266

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 8/123 (6%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R + EQV ALE  + +  K    R+ +L R+      ++P+Q+ +WFQNRR R K +
Sbjct: 51  KKRRLSVEQVRALEVSFEKENKLEPERKARLARDL----GLQPRQVAIWFQNRRARWKTK 106

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
           +       + +   A    L  ++D L++    L+ E   +K +L   PA   AS  SV 
Sbjct: 107 QLERDYAALRQSFDA----LRADHDALRRDKDALLAEVKALKAKLEDGPAAAAASFSSVK 162

Query: 149 TTP 151
             P
Sbjct: 163 EEP 165


>gi|218201267|gb|EEC83694.1| hypothetical protein OsI_29510 [Oryza sativa Indica Group]
          Length = 352

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 23/142 (16%)

Query: 12  QRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEP 71
           +R SS  S +       K +R + EQ   LE  + E    S+L  +Q +     L N+ P
Sbjct: 155 ERSSSRASDDDEGASARKKLRLSKEQSAFLEESFKEH---STLNPKQKVALAKQL-NLRP 210

Query: 72  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ 131
           +Q++VWFQNRR R K ++     + + R      + L EEN RL K++++L        +
Sbjct: 211 RQVEVWFQNRRARTKLKQTEVDCEYLKR----CCETLTEENRRLHKELAEL--------R 258

Query: 132 QLRTA-------PATTDASCDS 146
            L+TA       PATT + C S
Sbjct: 259 ALKTARPFYMHLPATTLSMCPS 280


>gi|390339027|ref|XP_781774.3| PREDICTED: insulin gene enhancer protein ISL-1-like
           [Strongylocentrotus purpuratus]
          Length = 402

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 13/104 (12%)

Query: 15  SSSGSINKHQLDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPK 72
           +SSG  + H+ +    VR     +Q+  L   Y+  P+P +L ++QL+     ++ + P+
Sbjct: 200 TSSGRSHVHKQEKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVE----MTQLSPR 255

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQ 116
            I+VWFQN+RC++K+R       TV  K  A  +   + N R+Q
Sbjct: 256 VIRVWFQNKRCKDKKR-------TVLMKQIADQQASKDPNRRVQ 292


>gi|195035223|ref|XP_001989077.1| GH11521 [Drosophila grimshawi]
 gi|193905077|gb|EDW03944.1| GH11521 [Drosophila grimshawi]
          Length = 283

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 81  KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 136

Query: 96  TVNRK 100
               K
Sbjct: 137 MQQEK 141


>gi|75131008|sp|Q6YPD0.1|HOX27_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX27; AltName:
           Full=HD-ZIP protein HOX27; AltName: Full=Homeodomain
           transcription factor HOX27; AltName: Full=OsHox27
 gi|46804964|dbj|BAD17827.1| putative homeobox-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|222640698|gb|EEE68830.1| hypothetical protein OsJ_27606 [Oryza sativa Japonica Group]
          Length = 354

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 23/142 (16%)

Query: 12  QRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEP 71
           +R SS  S +       K +R + EQ   LE  + E    S+L  +Q +     L N+ P
Sbjct: 157 ERSSSRASDDDEGASARKKLRLSKEQSAFLEESFKEH---STLNPKQKVALAKQL-NLRP 212

Query: 72  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ 131
           +Q++VWFQNRR R K ++     + + R      + L EEN RL K++++L        +
Sbjct: 213 RQVEVWFQNRRARTKLKQTEVDCEYLKR----CCETLTEENRRLHKELAEL--------R 260

Query: 132 QLRTA-------PATTDASCDS 146
            L+TA       PATT + C S
Sbjct: 261 ALKTARPFYMHLPATTLSMCPS 282


>gi|357533873|gb|AET82990.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533881|gb|AET82994.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
          Length = 146

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV ALE  +    K    ++ QL +       ++P+QI VWFQNRR R K +
Sbjct: 34  KKRRLTLEQVRALEENFEMANKLEPEKKMQLAKAL----GLQPRQIAVWFQNRRARWKTK 89

Query: 89  KEASRLQTVNRKLTAMNK---LLMEENDRLQKQVSQL 122
           +       +     ++ +    LMEEN+ LQ  + +L
Sbjct: 90  QLEKDFNILKHDYDSLKQNYDNLMEENNNLQAMIERL 126


>gi|358254958|dbj|GAA56650.1| insulin gene enhancer protein isl-2b [Clonorchis sinensis]
          Length = 712

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 13  RESSSGSINKHQLDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           R   SG   + +      VR     +Q+  L   Y+  P+P +L ++QL+     ++++ 
Sbjct: 293 RNGKSGGSKRSKDQKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVE----MTSLS 348

Query: 71  PKQIKVWFQNRRCREKQRK 89
           P+ I+VWFQN+RC++K+R+
Sbjct: 349 PRVIRVWFQNKRCKDKKRQ 367


>gi|113205186|gb|AAT39931.2| Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum]
          Length = 173

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 8/97 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 79  KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 134

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
           +     + + R+  A+      END LQ Q  +L  E
Sbjct: 135 QLEKDYEVLKRQFDAIKA----ENDALQTQNQKLHAE 167


>gi|328707559|ref|XP_001944557.2| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
           [Acyrthosiphon pisum]
          Length = 513

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   YS  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K+R  A + Q
Sbjct: 333 KQLHTLRTCYSANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKRAIALKQQ 388

Query: 96  TVNRK 100
               K
Sbjct: 389 IQQDK 393


>gi|226493195|ref|NP_001140555.1| uncharacterized protein LOC100272620 [Zea mays]
 gi|194690356|gb|ACF79262.1| unknown [Zea mays]
 gi|194699966|gb|ACF84067.1| unknown [Zea mays]
 gi|219887213|gb|ACL53981.1| unknown [Zea mays]
 gi|408690264|gb|AFU81592.1| HB-type transcription factor, partial [Zea mays subsp. mays]
 gi|414885871|tpg|DAA61885.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 261

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 12/145 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R ++EQV ALER +    K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 48  KKRRLSSEQVRALERSFEVENKLEPERKARLARDL----GLQPRQVAVWFQNRRARWKTK 103

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
           +    L+     L      L  ++D L++    L+ E   +K +L    A   AS  SV 
Sbjct: 104 Q----LERDYSALRQSYDALRHDHDALRRDKDALLAEIKELKAKLGDEEAA--ASFTSVK 157

Query: 149 TTPQHSLRDANNPAGLLSIAEETLA 173
             P  S  D   P G+ S   ++ A
Sbjct: 158 AEPAAS--DGPPPVGVGSSESDSSA 180


>gi|357611533|gb|EHJ67530.1| lim homeobox protein [Danaus plexippus]
          Length = 481

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 5/94 (5%)

Query: 3   MVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRE 62
           +V +   +  R    GS++            TA+Q+E L+  YS  PKP+   R+QL ++
Sbjct: 244 LVCKPDYEAARAKGEGSLDGDAASKRPRTTITAKQLETLKSAYSSSPKPARHVREQLAQD 303

Query: 63  CPILSNIEPKQIKVWFQNRRCREKQ-RKEASRLQ 95
               + ++ + ++VWFQNRR +EK+ +K+A R +
Sbjct: 304 ----TGLDMRVVQVWFQNRRAKEKRLKKDAGRTR 333


>gi|115476936|ref|NP_001062064.1| Os08g0481400 [Oryza sativa Japonica Group]
 gi|75133144|sp|Q6Z248.1|HOX20_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX20; AltName:
           Full=HD-ZIP protein HOX20; AltName: Full=Homeodomain
           transcription factor HOX20; AltName: Full=OsHox20
 gi|187609445|sp|A2YWC0.1|HOX20_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX20; AltName:
           Full=HD-ZIP protein HOX20; AltName: Full=Homeodomain
           transcription factor HOX20; AltName: Full=OsHox20
 gi|42409030|dbj|BAD10283.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|113624033|dbj|BAF23978.1| Os08g0481400 [Oryza sativa Japonica Group]
 gi|125561933|gb|EAZ07381.1| hypothetical protein OsI_29633 [Oryza sativa Indica Group]
 gi|215687008|dbj|BAG90822.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215741349|dbj|BAG97844.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 269

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 10/134 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R + EQV ALER +    K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 43  KKRRLSVEQVRALERSFETENKLEPERKARLARDL----GLQPRQVAVWFQNRRARWKTK 98

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
           +    L+     L      L  ++D L++    L+ E   +K +L    A   AS  SV 
Sbjct: 99  Q----LERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAA--ASFSSVK 152

Query: 149 TTPQHSLRDANNPA 162
                +  DA+ PA
Sbjct: 153 EEEDPAASDADPPA 166


>gi|357113844|ref|XP_003558711.1| PREDICTED: homeobox-leucine zipper protein HOX21-like [Brachypodium
           distachyon]
          Length = 335

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 7/119 (5%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 116 KKRRLNVEQVRTLEKNFELANKLEPERKIQLARAL----GLQPRQVAIWFQNRRARWKTK 171

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +       + R+  A+   N  L+  N +LQ ++  L   +     +L      T+ASC
Sbjct: 172 QLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKGCSREAASELINLNKETEASC 230


>gi|356548619|ref|XP_003542698.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Glycine max]
          Length = 285

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 12/123 (9%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R ++EQV  LE+ + E  K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 66  KKHRLSSEQVHLLEKNFEEENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 121

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
              ++   L++    L +    +M+EN++L+   S++V  N  ++ Q +  P  T   CD
Sbjct: 122 QLERDYDVLKSSYDTLLSSYDSIMKENEKLK---SEVVSLNEKLQVQAKEVPEET--LCD 176

Query: 146 SVV 148
             V
Sbjct: 177 KKV 179


>gi|6714433|gb|AAF26121.1|AC012328_24 hypothetical protein [Arabidopsis thaliana]
          Length = 695

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 19/103 (18%)

Query: 43  RVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLT 102
           + + ECP P   +R QL RE      +EP QIK WFQN+R + K +++ S     N  L 
Sbjct: 38  KTFIECPHPDERQRNQLCREL----KLEPDQIKFWFQNKRTQSKTQEDRS----TNVLLR 89

Query: 103 AMNKLLMEENDRLQKQVSQLVC-----------ENGYMKQQLR 134
             N+ L  +N+ +   +  ++C           E G+  Q+LR
Sbjct: 90  GENETLQSDNEAMLDALKSVLCPACGGPPFGREERGHNLQKLR 132


>gi|242009361|ref|XP_002425456.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
 gi|212509292|gb|EEB12718.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
          Length = 433

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 9/77 (11%)

Query: 16  SSGSINKHQLDNGKYVR----YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEP 71
           SSG  NK   D GK  R       +Q+  L   Y+  P+P +L ++QL+     ++ + P
Sbjct: 208 SSGGTNKVSSD-GKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVE----MTGLSP 262

Query: 72  KQIKVWFQNRRCREKQR 88
           + I+VWFQN+RC++K+R
Sbjct: 263 RVIRVWFQNKRCKDKKR 279


>gi|3868831|dbj|BAA34236.1| CRHB2 [Ceratopteris richardii]
          Length = 308

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 16/98 (16%)

Query: 29  KYVRYTAEQVEALERVYSE----CPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           K +R + EQ   LE  + E     PK  SL  +QL        N+ P+Q++VWFQNRR R
Sbjct: 193 KKLRLSKEQSALLEESFKEHSTLNPKQKSLLAKQL--------NLRPRQVEVWFQNRRAR 244

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
            K ++     + + R   +    L EEN RLQK+V++L
Sbjct: 245 TKLKQTEVDCELLKRCCES----LTEENRRLQKEVAEL 278


>gi|268416836|gb|ACZ05048.1| putative homeobox protein 12 [Phytolacca acinosa]
          Length = 241

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 65/123 (52%), Gaps = 9/123 (7%)

Query: 3   MVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRE 62
           MV + +     E  SGS  K ++ N K  R++ EQV++LE ++    K    ++ Q+ RE
Sbjct: 2   MVEEGEYYSPSEVGSGSSMKRKMMNKK--RFSDEQVKSLESIFENETKLEPKKKVQVARE 59

Query: 63  CPILSNIEPKQIKVWFQNRRCREKQR---KEASRLQTVNRKLTAMNKLLMEENDRLQKQV 119
                 ++P+Q+ +WFQN+R R K +   ++ S L+T    L +  + L ++   +  Q+
Sbjct: 60  L----GLQPRQVAIWFQNKRARFKSKQLERDYSLLRTSYNSLASQFETLKKDKLSILSQL 115

Query: 120 SQL 122
            +L
Sbjct: 116 QKL 118


>gi|449451247|ref|XP_004143373.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Cucumis sativus]
 gi|449482562|ref|XP_004156324.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Cucumis sativus]
          Length = 165

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 8/98 (8%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+ K  R + +Q+EALER + E  K    R+ +L +E      ++P+QI VWFQNRR R
Sbjct: 6   VDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKEL----GLQPRQIAVWFQNRRAR 61

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
            K ++      T+ ++   ++K    E   LQ++V +L
Sbjct: 62  WKTKQLEHLYDTLKQQFDTISK----EKHNLQQEVMKL 95


>gi|307200797|gb|EFN80850.1| LIM/homeobox protein Lhx3 [Harpegnathos saltator]
          Length = 421

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 5/88 (5%)

Query: 7   QQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPIL 66
           +Q + +  +  GSI+  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    
Sbjct: 203 EQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQD---- 258

Query: 67  SNIEPKQIKVWFQNRRCREKQ-RKEASR 93
           + ++ + ++VWFQNRR +EK+ +K+A R
Sbjct: 259 TGLDMRVVQVWFQNRRAKEKRLKKDAGR 286


>gi|326581036|gb|ADZ96470.1| HD-Zip subfamily I trancription factor [Helianthus annuus]
          Length = 313

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ LER +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 92  KKRRLNMEQVKTLERNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 147

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
           +       + R+  A+      END LQ Q  +L  E
Sbjct: 148 QLEKDYDALKRQFEAVKA----ENDSLQSQNHKLHAE 180


>gi|297798220|ref|XP_002866994.1| homeobox-leucine zipper protein ATHB-40 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312830|gb|EFH43253.1| homeobox-leucine zipper protein ATHB-40 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 217

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 17/132 (12%)

Query: 7   QQQQQQRESSSGSINKHQLDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           +Q +++R+ S G++      N  + +   T EQV  LE  + +  K  S R+ +L  E  
Sbjct: 32  KQPKRRRKKSKGALASGDGSNSLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAEL- 90

Query: 65  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
               ++P+Q+ VWFQNRR R K +    RL+    KL   +  ++ +  RL+ +V QL  
Sbjct: 91  ---GLDPRQVAVWFQNRRARWKNK----RLEEEYNKLKNSHDNVVVDKCRLESEVIQL-- 141

Query: 125 ENGYMKQQLRTA 136
                K+QL  A
Sbjct: 142 -----KEQLYDA 148


>gi|170053181|ref|XP_001862556.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
 gi|167873811|gb|EDS37194.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
          Length = 438

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 42/66 (63%), Gaps = 4/66 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q++ L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 241 KQLQTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 296

Query: 96  TVNRKL 101
               K+
Sbjct: 297 MQQEKV 302


>gi|407280647|gb|AFT92045.1| homeodomain leucine zipper protein 10 [Zea mays]
 gi|414589739|tpg|DAA40310.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein isoform 1 [Zea mays]
 gi|414589740|tpg|DAA40311.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein isoform 2 [Zea mays]
          Length = 274

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 11/138 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R +AEQV ALER +    K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 52  KKRRLSAEQVRALERSFEVENKLEPERKARLARDL----GLQPRQVAVWFQNRRARWKTK 107

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
           +       + R   A    L  ++D L++    L+ E   +K +L        AS  SV 
Sbjct: 108 QLERDYAALRRSYDA----LRLDHDALRRDKDALLAEIRELKAKLGDDEDAA-ASFTSVK 162

Query: 149 TTPQHSLRDANNPAGLLS 166
             P  S  D   PAG+ S
Sbjct: 163 AEPAAS--DGPAPAGVGS 178


>gi|328707561|ref|XP_003243430.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
           [Acyrthosiphon pisum]
          Length = 487

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   YS  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K+R  A + Q
Sbjct: 307 KQLHTLRTCYSANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKRAIALKQQ 362

Query: 96  TVNRK 100
               K
Sbjct: 363 IQQDK 367


>gi|255558238|ref|XP_002520146.1| homeobox protein, putative [Ricinus communis]
 gi|223540638|gb|EEF42201.1| homeobox protein, putative [Ricinus communis]
          Length = 305

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 7/98 (7%)

Query: 28  GKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 87
            K  R TA QV+ LER +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 81  AKKRRLTATQVQFLERNFEVENKLEPERKIQLAKEL----GLQPRQVAIWFQNRRARFKN 136

Query: 88  R---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           +   K+   L+    KL A    L++EN+ L+ +   L
Sbjct: 137 KQLEKDYDSLKASYDKLKADYDNLLKENENLKNEFVSL 174


>gi|165968265|gb|ABY75942.1| At5g03790 [Arabidopsis thaliana]
 gi|165968271|gb|ABY75945.1| At5g03790 [Arabidopsis thaliana]
          Length = 192

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 11/141 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T+ Q+ +LER + E  K  S R+ +L RE      ++P+QI VWFQNRR R K +
Sbjct: 36  KKKRLTSGQLASLERSFQEDIKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWKAK 91

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDS-- 146
           +      ++ ++   +++     +D + K++  L+ + G +K+Q+           D+  
Sbjct: 92  QLEQLYDSLRQEYDVVSREKQMLHDEV-KKLRALLRDQGLIKKQISAGTIKVSGEEDTVE 150

Query: 147 ----VVTTPQHSLRDANNPAG 163
               VV  P+    +AN   G
Sbjct: 151 ISSVVVAHPRTENMNANQITG 171


>gi|37147908|gb|AAQ88401.1| HD-ZIP [Capsicum annuum]
          Length = 220

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 12/139 (8%)

Query: 22  KHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 81
           K + +N K  R+T EQV+ LE ++    K     + QL R+      ++P+Q+ +WFQN+
Sbjct: 18  KKKCENAK--RFTDEQVKLLESMFKLGTKIEPREKLQLARDL----GLQPRQVAIWFQNK 71

Query: 82  RCREKQRKEASRLQTVNRKLTAMN---KLLMEENDRLQKQVSQLVCENGYMKQQLRTAPA 138
           R R K ++     + +  K   +N   + L  E +RL  ++  L   N  +  +L     
Sbjct: 72  RARWKSKQLEHEYRILQSKFDHLNTQFESLKIEKERLLIELETL---NDQLGNKLARGSK 128

Query: 139 TTDASCDSVVTTPQHSLRD 157
           + D+    + T+P++   D
Sbjct: 129 SQDSRDSELHTSPENGFTD 147


>gi|76577747|gb|ABA54144.1| homeobox-leucine zipper-like protein [Picea glauca]
          Length = 309

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV ALE+ +    K    ++ QL +       ++P+QI VWFQNRR R K +
Sbjct: 87  KKRRLTLEQVRALEKNFEMANKLEPEKKMQLAKAL----GLQPRQIAVWFQNRRARWKTK 142

Query: 89  KEASRLQTVNRKLTAMNK---LLMEENDRLQKQVSQL 122
           +       + +   A+ +    LMEEN+ LQ  + ++
Sbjct: 143 QLEKDFNVLKQDYDALKQDYDNLMEENNNLQAMIERM 179


>gi|256077688|ref|XP_002575133.1| insulinprotein enhancer protein isl [Schistosoma mansoni]
 gi|353229553|emb|CCD75724.1| putative insulinprotein enhancer protein isl [Schistosoma mansoni]
          Length = 409

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 38/54 (70%), Gaps = 4/54 (7%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
           +Q+  L   Y+  P+P +L ++QL+     ++++ P+ I+VWFQN+RC++K+R+
Sbjct: 150 KQLHTLRTCYAANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKRQ 199


>gi|356502193|ref|XP_003519905.1| PREDICTED: homeobox-leucine zipper protein ATHB-40-like [Glycine
           max]
          Length = 212

 Score = 52.8 bits (125), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 13/142 (9%)

Query: 4   VIQQQQQQQRESSSGSINKHQLDNGKYV----RYTAEQVEALERVYSECPKPSSLRRQQL 59
           V  QQ +  +     +      +NG  +    + T EQ+  LER +S   K  S R+ QL
Sbjct: 25  VTPQQGENNKPRHKRNRKNRGGENGTIITKKRKLTVEQISLLERNFSNEHKLESERKDQL 84

Query: 60  IRECPILSNIEPKQIKVWFQNRRCREKQRK---EASRLQTVNRKLTAMNKLLME-ENDRL 115
             E     +++P+Q+ VWFQNRR R K +K   E S L+ V+ + T ++K  +E E  +L
Sbjct: 85  ALEL----SLDPRQVAVWFQNRRSRWKTQKLEEEYSNLKNVH-ETTMLDKCHLENEVLKL 139

Query: 116 QKQVSQLVCENGYMKQQLRTAP 137
           ++Q+ +   E   + ++   AP
Sbjct: 140 KEQLLETKKEIEQLLERGEKAP 161


>gi|322793254|gb|EFZ16911.1| hypothetical protein SINV_14186 [Solenopsis invicta]
          Length = 392

 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 5/88 (5%)

Query: 7   QQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPIL 66
           +Q + +  +  GSI+  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    
Sbjct: 121 EQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQD---- 176

Query: 67  SNIEPKQIKVWFQNRRCREKQ-RKEASR 93
           + ++ + ++VWFQNRR +EK+ +K+A R
Sbjct: 177 TGLDMRVVQVWFQNRRAKEKRLKKDAGR 204


>gi|255575467|ref|XP_002528635.1| homeobox protein, putative [Ricinus communis]
 gi|223531924|gb|EEF33738.1| homeobox protein, putative [Ricinus communis]
          Length = 223

 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 8/94 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T++Q+E+LER + E  K    R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 61  KKKRLTSDQLESLERSFQEEIKLDPDRKMKLSREL----GLQPRQIAVWFQNRRARWK-- 114

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
             A +L+ +   L     ++ +E   LQ++V +L
Sbjct: 115 --AKQLERLYDSLKEEFDVVSKEKQNLQEEVMKL 146


>gi|165968253|gb|ABY75936.1| At5g03790 [Arabidopsis thaliana]
 gi|165968261|gb|ABY75940.1| At5g03790 [Arabidopsis thaliana]
 gi|165968263|gb|ABY75941.1| At5g03790 [Arabidopsis thaliana]
 gi|165968267|gb|ABY75943.1| At5g03790 [Arabidopsis thaliana]
 gi|165968269|gb|ABY75944.1| At5g03790 [Arabidopsis thaliana]
 gi|165968279|gb|ABY75949.1| At5g03790 [Arabidopsis thaliana]
          Length = 192

 Score = 52.8 bits (125), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 11/141 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T+ Q+ +LER + E  K  S R+ +L RE      ++P+QI VWFQNRR R K +
Sbjct: 36  KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWKAK 91

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDS-- 146
           +      ++ ++   +++     +D + K++  L+ + G +K+Q+           D+  
Sbjct: 92  QLEQLYDSLRQEYDVVSREKQMLHDEV-KKLRALLRDQGLIKKQISAGTIKVSGEEDTVE 150

Query: 147 ----VVTTPQHSLRDANNPAG 163
               VV  P+    +AN   G
Sbjct: 151 ISSVVVAHPRTENMNANQITG 171


>gi|332018435|gb|EGI59029.1| LIM/homeobox protein Lhx3 [Acromyrmex echinatior]
          Length = 467

 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 5/88 (5%)

Query: 7   QQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPIL 66
           +Q + +  +  GSI+  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    
Sbjct: 202 EQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQD---- 257

Query: 67  SNIEPKQIKVWFQNRRCREKQ-RKEASR 93
           + ++ + ++VWFQNRR +EK+ +K+A R
Sbjct: 258 TGLDMRVVQVWFQNRRAKEKRLKKDAGR 285


>gi|86129714|gb|ABC86566.1| homeodomain-leucine zipper transcription factor TaHDZipI-1
           [Triticum aestivum]
          Length = 247

 Score = 52.4 bits (124), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 12/136 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R +AEQV ALER +    K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 53  KKRRLSAEQVRALERSFEVENKLEPERKARLARDL----GLQPRQVAVWFQNRRARWKTK 108

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
           +       +     A    L  ++D L++    L+ E   +K +L    A   AS  SV 
Sbjct: 109 QLERDYNALRHSYDA----LRVDHDALRRDKEALLAEIKDLKGKLGDEEAA--ASFTSVK 162

Query: 149 TTPQHSLRDANNPAGL 164
             P  S  D   PAG+
Sbjct: 163 EEPAAS--DGPPPAGM 176


>gi|225456662|ref|XP_002271692.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Vitis
           vinifera]
          Length = 317

 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R TA+QV+ LER +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 81  KKRRLTADQVQFLERNFEVENKLEPERKVQLAKDL----GLQPRQVAIWFQNRRARWKTK 136

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQV 119
              K+   LQ     L A  + L++E D L+ +V
Sbjct: 137 QLEKDFGALQASYNSLKAEYENLLKEKDELKTEV 170


>gi|356533426|ref|XP_003535265.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Glycine max]
          Length = 225

 Score = 52.4 bits (124), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 19/127 (14%)

Query: 9   QQQQRESSSGSINKHQLDNG-KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILS 67
           +QQ    +S S+ K    N  K  R T++Q+++LE  + +  K    R+ +L +E     
Sbjct: 36  KQQTLAGTSSSMEKMNCGNQEKKKRLTSDQLDSLENSFQKEIKLDPDRKMKLSKEL---- 91

Query: 68  NIEPKQIKVWFQNRRCREKQRKE--------------ASRLQTVNRKLTAMNKLLMEEND 113
            ++P+QI VWFQNRR R K ++               +   Q +  ++  +  +L E+  
Sbjct: 92  GLQPRQIAVWFQNRRARWKNKQLEHLYDSLKQEFDVISKEKQKLGEEVMKLKTMLREQAS 151

Query: 114 RLQKQVS 120
           R Q+QVS
Sbjct: 152 RTQQQVS 158


>gi|48057626|gb|AAT39949.1| Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum]
          Length = 171

 Score = 52.4 bits (124), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 8/94 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 86  KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 141

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           +     + + R+  A+      END LQ Q  +L
Sbjct: 142 QLEKDYEVLKRQFDAIKA----ENDALQTQNQKL 171


>gi|307174398|gb|EFN64917.1| LIM/homeobox protein Lhx3 [Camponotus floridanus]
          Length = 467

 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 5/88 (5%)

Query: 7   QQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPIL 66
           +Q + +  +  GSI+  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    
Sbjct: 202 EQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQD---- 257

Query: 67  SNIEPKQIKVWFQNRRCREKQ-RKEASR 93
           + ++ + ++VWFQNRR +EK+ +K+A R
Sbjct: 258 TGLDMRVVQVWFQNRRAKEKRLKKDAGR 285


>gi|297810781|ref|XP_002873274.1| homeobox-leucine zipper protein 14 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319111|gb|EFH49533.1| homeobox-leucine zipper protein 14 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 343

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 17/160 (10%)

Query: 12  QRESSSGSINKHQLDNG---KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSN 68
           +R +S  S   +  +NG   K +R + +Q   LE  + E    S+L  +Q I     L N
Sbjct: 170 ERSASRASNEDNDEENGSTRKKLRLSKDQSAFLEDSFKEH---STLNPKQKIALAKQL-N 225

Query: 69  IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL----VC 124
           + P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK+V +L      
Sbjct: 226 LRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTLKTS 281

Query: 125 ENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGL 164
              YM  QL     T   SC+ V T+       A +  GL
Sbjct: 282 TPFYM--QLPATTLTMCPSCERVATSAAQPATSAAHNLGL 319


>gi|297606515|ref|NP_001058601.2| Os06g0719900 [Oryza sativa Japonica Group]
 gi|255677401|dbj|BAF20515.2| Os06g0719900 [Oryza sativa Japonica Group]
          Length = 93

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/30 (76%), Positives = 25/30 (83%)

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVV 292
           Q YAPTTLAPA DFW LRYT+ L +GSLVV
Sbjct: 31  QLYAPTTLAPAHDFWLLRYTSILGDGSLVV 60


>gi|171692673|ref|XP_001911261.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946285|emb|CAP73086.1| unnamed protein product [Podospora anserina S mat+]
          Length = 707

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 9/87 (10%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T +Q   L   +++ P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 224 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 278

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRL 115
               RL   +R+     + + E+ D L
Sbjct: 279 ----RLTADDRERMIKMRAVPEDFDNL 301


>gi|242049134|ref|XP_002462311.1| hypothetical protein SORBIDRAFT_02g023650 [Sorghum bicolor]
 gi|241925688|gb|EER98832.1| hypothetical protein SORBIDRAFT_02g023650 [Sorghum bicolor]
          Length = 317

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 8/96 (8%)

Query: 32  RYTAEQVEALERVYSECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR-- 88
           R TAEQV  LE  + E   K    R+ +L R       I P+Q+ VWFQNRR R + +  
Sbjct: 103 RLTAEQVRELELSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWRTKQL 158

Query: 89  -KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
            ++  RL+  +  L A    L+ +NDRL+ QV  L 
Sbjct: 159 EQDFDRLRAAHDDLLAGRDALLADNDRLRSQVITLT 194


>gi|116787413|gb|ABK24498.1| unknown [Picea sitchensis]
          Length = 309

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV ALE+ +    K    ++ QL +       ++P+QI VWFQNRR R K +
Sbjct: 87  KKRRLTLEQVRALEKNFEIANKLEPEKKMQLAKAL----GLQPRQIAVWFQNRRARWKTK 142

Query: 89  KEASRLQTVNRKLTAMNK---LLMEENDRLQKQVSQL 122
           +       + +   A+ +    LMEEN+ LQ  + ++
Sbjct: 143 QLEKDFNVLKQDYDALKQDYDNLMEENNNLQAMIERM 179


>gi|195114382|ref|XP_002001746.1| GI17017 [Drosophila mojavensis]
 gi|193912321|gb|EDW11188.1| GI17017 [Drosophila mojavensis]
          Length = 533

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 259 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 314

Query: 96  TVNRK 100
               K
Sbjct: 315 MQQEK 319


>gi|46242605|gb|AAS83420.1| Hox13 [Oryza sativa Japonica Group]
          Length = 140

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV ALER +    K    R+ ++ R+      ++P+Q+ VWFQNRR R K +
Sbjct: 18  KKRRLALEQVRALERSFDTDNKLDPDRKARIARDL----GLQPRQVAVWFQNRRARWKTK 73

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDAS 143
           +    L+     L A +  L  + D L++    L  E   ++++L T PA T AS
Sbjct: 74  Q----LERDFAALRARHDALRADCDALRRDKDALAAEIRELREKLPTKPADTAAS 124


>gi|340730421|gb|AEK64851.1| aristaless-like homeobox protein [Branchiostoma floridae]
          Length = 300

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 25/167 (14%)

Query: 14  ESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           ESS+ +    +        +T+ Q+E +ERV+ +   P    R+QL     + +++   +
Sbjct: 100 ESSTHAAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLA----LRADLTEAR 155

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           ++VWFQNRR + ++++   ++  + +     +   +    R          +NGY + Q 
Sbjct: 156 VQVWFQNRRAKWRKKERFQQMAGIRQVALGADPYDISMGQR----------QNGYTQAQP 205

Query: 134 RTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 180
                TT+ASC      PQ      +NPA  + +A + L+ +L+ A+
Sbjct: 206 TQWTTTTNASC----MAPQ------SNPASFMGVATQALS-YLTSAS 241


>gi|198473929|ref|XP_001356494.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
 gi|198138172|gb|EAL33558.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
          Length = 548

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 96  TVNRK 100
               K
Sbjct: 307 MQQEK 311


>gi|195147414|ref|XP_002014675.1| GL18825 [Drosophila persimilis]
 gi|194106628|gb|EDW28671.1| GL18825 [Drosophila persimilis]
          Length = 550

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 96  TVNRK 100
               K
Sbjct: 307 MQQEK 311


>gi|302793704|ref|XP_002978617.1| hypothetical protein SELMODRAFT_108871 [Selaginella moellendorffii]
 gi|300153966|gb|EFJ20603.1| hypothetical protein SELMODRAFT_108871 [Selaginella moellendorffii]
          Length = 128

 Score = 52.4 bits (124), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R + EQV+ALE+ +    K    R+ QL +E      ++P+Q+ VWFQNRR R K +
Sbjct: 35  KKRRLSVEQVKALEKNFEIENKLEPDRKIQLAKEL----GLQPRQVAVWFQNRRARWKTK 90

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
              K+   L++    L A    L +E D+LQ +V  L
Sbjct: 91  QLEKDYDLLKSEYDDLKASYVDLAKERDKLQAEVDLL 127


>gi|50556204|ref|XP_505510.1| YALI0F16852p [Yarrowia lipolytica]
 gi|49651380|emb|CAG78319.1| YALI0F16852p [Yarrowia lipolytica CLIB122]
          Length = 850

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 4/57 (7%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           + +  Q+  LE+V++E PKP    R +L R+     ++  K I++WFQNRR +EKQ 
Sbjct: 281 KLSEHQLRVLEKVFNETPKPCLKTRTELERDL----DLPKKNIQIWFQNRRAKEKQN 333


>gi|296815888|ref|XP_002848281.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
 gi|238841306|gb|EEQ30968.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
          Length = 712

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 10/123 (8%)

Query: 16  SSGSINKHQ--LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           ++G+I +++  ++N    R T EQVE LE  +   PKP+S  ++QL     + +++   +
Sbjct: 50  TTGAIEEYEEYVENLSRPRLTKEQVEILESQFQAHPKPNSNTKRQLA----LQTSLTLPR 105

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
           +  WFQNRR + KQ+K     +    K+ A  K +  E    Q+Q S+   E    +Q  
Sbjct: 106 VANWFQNRRAKAKQQKRQEEFE----KMQAKEKAMAAEGSENQQQQSESSDEQQKSEQDQ 161

Query: 134 RTA 136
           + +
Sbjct: 162 KNS 164


>gi|4262185|gb|AAD14502.1| putative DNA-binding protein [Arabidopsis thaliana]
          Length = 282

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQ++ALE+ +    K  S R+ +L R       ++P+QI +WFQNRR R K +
Sbjct: 98  KKRRLNMEQLKALEKDFELGNKLESDRKLELARAL----GLQPRQIAIWFQNRRARSKTK 153

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQV 119
           +       + R+  ++   N++L  +N +LQ QV
Sbjct: 154 QLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQV 187


>gi|300709018|ref|XP_002996678.1| hypothetical protein NCER_100211 [Nosema ceranae BRL01]
 gi|239605997|gb|EEQ83007.1| hypothetical protein NCER_100211 [Nosema ceranae BRL01]
          Length = 169

 Score = 52.0 bits (123), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 4/60 (6%)

Query: 32 RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
          R T  Q++ LE+ +  CP+P S  R++L  +     ++ P+ ++VWFQNRR + K+++++
Sbjct: 35 RTTKAQLKVLEKTFENCPRPDSTMRKKLADQL----SMTPRSVQVWFQNRRAKVKKQQQS 90


>gi|302774242|ref|XP_002970538.1| hypothetical protein SELMODRAFT_18196 [Selaginella moellendorffii]
 gi|300162054|gb|EFJ28668.1| hypothetical protein SELMODRAFT_18196 [Selaginella moellendorffii]
          Length = 104

 Score = 52.0 bits (123), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R + EQV+ALE+ +    K    R+ QL +E      ++P+Q+ VWFQNRR R K +
Sbjct: 15  KKRRLSVEQVKALEKNFEIENKLEPDRKIQLAKEL----GLQPRQVAVWFQNRRARWKTK 70

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQV 119
              K+   L++    L A    L +E D+LQ +V
Sbjct: 71  QLEKDYDLLKSEYDDLKASYVDLAKERDKLQAEV 104


>gi|17136568|ref|NP_476775.1| tailup, isoform A [Drosophila melanogaster]
 gi|195580000|ref|XP_002079844.1| GD21801 [Drosophila simulans]
 gi|7298500|gb|AAF53720.1| tailup, isoform A [Drosophila melanogaster]
 gi|194191853|gb|EDX05429.1| GD21801 [Drosophila simulans]
          Length = 534

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 96  TVNRK 100
               K
Sbjct: 307 MQQEK 311


>gi|195344936|ref|XP_002039032.1| GM17053 [Drosophila sechellia]
 gi|194134162|gb|EDW55678.1| GM17053 [Drosophila sechellia]
          Length = 534

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 96  TVNRK 100
               K
Sbjct: 307 MQQEK 311


>gi|449464246|ref|XP_004149840.1| PREDICTED: homeobox-leucine zipper protein HAT22-like [Cucumis
           sativus]
 gi|449518661|ref|XP_004166355.1| PREDICTED: homeobox-leucine zipper protein HAT22-like [Cucumis
           sativus]
          Length = 273

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 15/144 (10%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K +R + +Q   LE  + +    +  ++Q L R+     N+ P+Q++VWFQNRR R K +
Sbjct: 123 KKLRLSKQQSALLEESFKQNSTLNPKQKQGLARQL----NLLPRQVEVWFQNRRARTKVK 178

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL----VCENGYMKQQLRTAPATTDASC 144
           +     +     L    + L +EN RLQK+V +L    + +  YM  Q+  A  T   SC
Sbjct: 179 QTEVDCEL----LKKCCETLTDENRRLQKEVQELKAIKLAKPVYM--QMSGATLTICPSC 232

Query: 145 DSVVTTPQHSLRDAN-NPAGLLSI 167
           + V T     + D N NP    S+
Sbjct: 233 ERVGTGGHGGVADGNSNPKPKFSM 256


>gi|367024589|ref|XP_003661579.1| hypothetical protein MYCTH_2301118 [Myceliophthora thermophila ATCC
           42464]
 gi|347008847|gb|AEO56334.1| hypothetical protein MYCTH_2301118 [Myceliophthora thermophila ATCC
           42464]
          Length = 680

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 9/87 (10%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T +Q   L   +++ P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 194 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 248

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRL 115
               RL   +R+     + + E+ D L
Sbjct: 249 ----RLTADDRERMMKMRAVPEDFDSL 271


>gi|165968255|gb|ABY75937.1| At5g03790 [Arabidopsis thaliana]
 gi|165968259|gb|ABY75939.1| At5g03790 [Arabidopsis thaliana]
 gi|165968275|gb|ABY75947.1| At5g03790 [Arabidopsis thaliana]
          Length = 192

 Score = 52.0 bits (123), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 5/119 (4%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T+ Q+ +LER + E  K  S R+ +L RE      ++P+QI VWFQNRR R K +
Sbjct: 36  KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWKAK 91

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSV 147
           +      ++ ++   +++     +D + K++  L+ + G +K+Q+           D+V
Sbjct: 92  QLEQLYDSLRQEYDVVSREKQMLHDEV-KKLRALLRDQGLIKKQISAGTIKVSGEEDTV 149


>gi|449519336|ref|XP_004166691.1| PREDICTED: homeobox-leucine zipper protein HAT14-like, partial
           [Cucumis sativus]
          Length = 372

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 17/147 (11%)

Query: 4   VIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIREC 63
           V+ +  + +R SS  S         K +R + EQ   LE  + E    +  ++Q L ++ 
Sbjct: 188 VMNEVGESERASSRASDEDENGCTRKKLRLSKEQSAFLEESFKEHNTLNPKQKQALAKQL 247

Query: 64  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL- 122
               N+ P+Q++VWFQNRR R K ++     + + R      + L EEN RLQK++ +L 
Sbjct: 248 ----NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR----CCETLTEENRRLQKELQELR 299

Query: 123 ---VCENGYMKQQLRTAPATTDASCDS 146
                 + YM+      PATT   C S
Sbjct: 300 ALKTTNSLYMQ-----LPATTLTMCPS 321


>gi|1895062|gb|AAB49892.1| LIM homeobox protein [Drosophila melanogaster]
          Length = 534

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 96  TVNRK 100
               K
Sbjct: 307 MHEEK 311


>gi|312379882|gb|EFR26035.1| hypothetical protein AND_08145 [Anopheles darlingi]
          Length = 324

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 128 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 183

Query: 96  TVNRK 100
               K
Sbjct: 184 MQQEK 188


>gi|229619792|dbj|BAH58094.1| LIM homeobox protein 3 [Hemicentrotus pulcherrimus]
          Length = 485

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  YS  PKP+   R+QL +E    + ++ + ++VWFQNRR +EK+ +K+A+
Sbjct: 223 TAKQLETLKTAYSNSPKPARHVREQLAQE----TGLDMRVVQVWFQNRRAKEKRLKKDAN 278

Query: 93  R 93
           R
Sbjct: 279 R 279


>gi|168060572|ref|XP_001782269.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666282|gb|EDQ52941.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 328

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 7/106 (6%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T +QV +LER +    K    R+ QL +E      + P+Q+ VWFQNRR R K +
Sbjct: 94  KKRRLTLDQVRSLERNFEVENKLEPDRKMQLAKEL----GMRPRQVAVWFQNRRARWKTK 149

Query: 89  KEASRLQTVN---RKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ 131
           +     +T+    ++L A  +L+++E + L+ ++ +L  +    KQ
Sbjct: 150 QLERDYETLEAGFKRLKADYELVLDEKNYLKAELQRLSGDTLGYKQ 195


>gi|195433046|ref|XP_002064526.1| GK23894 [Drosophila willistoni]
 gi|194160611|gb|EDW75512.1| GK23894 [Drosophila willistoni]
          Length = 539

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 249 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 304

Query: 96  TVNRK 100
               K
Sbjct: 305 MQQEK 309


>gi|17136566|ref|NP_476774.1| tailup, isoform B [Drosophila melanogaster]
 gi|5052638|gb|AAD38649.1|AF145674_1 tailup [Drosophila melanogaster]
 gi|22946785|gb|AAN11018.1| tailup, isoform B [Drosophila melanogaster]
 gi|220942306|gb|ACL83696.1| tup-PB [synthetic construct]
 gi|220952524|gb|ACL88805.1| tup-PB [synthetic construct]
          Length = 465

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 96  TVNRK 100
               K
Sbjct: 307 MQQEK 311


>gi|449546854|gb|EMD37823.1| hypothetical protein CERSUDRAFT_94820 [Ceriporiopsis
          subvermispora B]
          Length = 763

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 43/67 (64%), Gaps = 4/67 (5%)

Query: 32 RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
          R T  Q++ LE VY+   KP++  R++L +E     ++ P+ ++VWFQNRR + KQ+++ 
Sbjct: 24 RTTRAQLKVLEDVYTRDTKPNASLRKKLAQEL----DMTPRGVQVWFQNRRAKTKQQRKK 79

Query: 92 SRLQTVN 98
          +   ++N
Sbjct: 80 AEAASLN 86


>gi|147860587|emb|CAN83969.1| hypothetical protein VITISV_039798 [Vitis vinifera]
          Length = 333

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R TA+QV+ LER +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 97  KKRRLTADQVQFLERNFEVENKLEPERKVQLAKDL----GLQPRQVAIWFQNRRARWKTK 152

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQV 119
              K+   LQ     L A  + L++E D L+ +V
Sbjct: 153 QLEKDFGALQASYNSLKAEYENLLKEKDELKTEV 186


>gi|357501763|ref|XP_003621170.1| Homeobox-leucine zipper-like protein [Medicago truncatula]
 gi|355496185|gb|AES77388.1| Homeobox-leucine zipper-like protein [Medicago truncatula]
          Length = 272

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 11/126 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K +R   +QV+ALE+ +    K    R+ QL +       ++P+QI +WFQNRR R K +
Sbjct: 80  KKIRLNLDQVQALEKSFEFGNKLDPERKVQLAKAL----GLQPRQIAIWFQNRRARCKTK 135

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQLV----CENGYMKQQLRTAPATTD 141
           +  +  + + +K  A+   N  L   N +LQ ++  L     CE G       T  + ++
Sbjct: 136 QLENEYEVLKKKFEAVKDENDALKVHNQKLQGELEALKSKDWCEGGTKYLMKETEGSWSN 195

Query: 142 ASCDSV 147
            S +S+
Sbjct: 196 GSDNSL 201


>gi|402467857|gb|EJW03091.1| hypothetical protein EDEG_02526 [Edhazardia aedis USNM 41457]
          Length = 517

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 4/60 (6%)

Query: 31  VRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 90
           ++ +AEQ+E LE  + E PKP+S  +++L +    L NI  K I++WFQNRR +++  KE
Sbjct: 153 IKISAEQLEILEEKFKENPKPTSSVKKELGK----LLNIPAKNIQIWFQNRRAKQRTEKE 208


>gi|358248872|ref|NP_001240210.1| uncharacterized protein LOC100813420 [Glycine max]
 gi|255635463|gb|ACU18084.1| unknown [Glycine max]
          Length = 284

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 12/123 (9%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R ++EQV  LE+ + E  K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 65  KKHRLSSEQVHLLEKSFEEENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 120

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
              ++   L++    L +    +M+EN++L+   S++V  N  ++ Q +  P   +  CD
Sbjct: 121 QLERDYDVLKSSYDTLLSSYDSIMKENEKLK---SEVVSLNEKLQVQAKEVPE--EPLCD 175

Query: 146 SVV 148
             V
Sbjct: 176 KKV 178


>gi|195386470|ref|XP_002051927.1| GJ24442 [Drosophila virilis]
 gi|194148384|gb|EDW64082.1| GJ24442 [Drosophila virilis]
          Length = 529

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 96  TVNRK 100
               K
Sbjct: 307 MQQEK 311


>gi|402072464|gb|EJT68253.1| hypothetical protein GGTG_14167 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 837

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T +Q   L   +++ P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 259 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 313

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQ 116
               RL   +R      + + ++ D +Q
Sbjct: 314 ----RLTADDRDRMIKMRAVPDDFDNVQ 337


>gi|194879942|ref|XP_001974333.1| GG21675 [Drosophila erecta]
 gi|190657520|gb|EDV54733.1| GG21675 [Drosophila erecta]
          Length = 534

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 96  TVNRK 100
               K
Sbjct: 307 MQQEK 311


>gi|115440077|ref|NP_001044318.1| Os01g0760800 [Oryza sativa Japonica Group]
 gi|31339111|dbj|BAC77162.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113533849|dbj|BAF06232.1| Os01g0760800, partial [Oryza sativa Japonica Group]
          Length = 134

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
           Y R+TAEQ+  +E ++ E P P   +RQQ+ ++      +  +Q+K WFQNRR + K+R 
Sbjct: 4   YHRHTAEQIRIMEALFKESPHPDERQRQQVSKQL----GLSARQVKFWFQNRRTQIKERH 59

Query: 90  EASRLQTVNRKLTAMNKLLME 110
           E S L++   KL   ++ + E
Sbjct: 60  ENSLLKSELEKLQDEHRAMRE 80


>gi|390335971|ref|XP_780701.3| PREDICTED: LIM/homeobox protein Lhx3-like [Strongylocentrotus
           purpuratus]
          Length = 545

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  YS  PKP+   R+QL +E    + ++ + ++VWFQNRR +EK+ +K+A+
Sbjct: 283 TAKQLETLKTAYSNSPKPARHVREQLAQE----TGLDMRVVQVWFQNRRAKEKRLKKDAN 338

Query: 93  R 93
           R
Sbjct: 339 R 339


>gi|357440243|ref|XP_003590399.1| Homeobox-leucine zipper protein ATHB-22 [Medicago truncatula]
 gi|355479447|gb|AES60650.1| Homeobox-leucine zipper protein ATHB-22 [Medicago truncatula]
          Length = 232

 Score = 52.0 bits (123), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 8/94 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T+EQ+E+LE  + E  K    R+ +L +E      ++P+QI +WFQNRR R K +
Sbjct: 59  KKKRLTSEQMESLESSFQEEIKLDPQRKMKLSKEL----GLQPRQIAIWFQNRRARWKTK 114

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           +    L+ +   L    +++ +E  +LQ +V +L
Sbjct: 115 Q----LEHLYDSLRHQFEVVSKEKQQLQDEVMKL 144


>gi|48209882|gb|AAT40488.1| putative DNA-binding protein [Solanum demissum]
          Length = 304

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 8/97 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 79  KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 134

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
           +     + + R+  A+      END LQ Q  +L  E
Sbjct: 135 QLEKDYEVLKRQFDAIKA----ENDALQTQNQKLHAE 167


>gi|224069752|ref|XP_002326405.1| predicted protein [Populus trichocarpa]
 gi|222833598|gb|EEE72075.1| predicted protein [Populus trichocarpa]
          Length = 121

 Score = 52.0 bits (123), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 8/92 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T++Q+E+LE+ + E  K    R+ +L RE      ++P+QI VWFQNRR R K +
Sbjct: 31  KKKRLTSDQLESLEKSFQEEIKLDPDRKMKLSREL----GLQPRQIAVWFQNRRARWKAK 86

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           +       + ++  +++K    E  +LQ++V+
Sbjct: 87  QLERLYDNLKQEFDSVSK----EKQKLQEEVN 114


>gi|195484275|ref|XP_002090625.1| GE12696 [Drosophila yakuba]
 gi|194176726|gb|EDW90337.1| GE12696 [Drosophila yakuba]
          Length = 540

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 96  TVNRK 100
               K
Sbjct: 307 MQQEK 311


>gi|449461919|ref|XP_004148689.1| PREDICTED: homeobox-leucine zipper protein HAT7-like [Cucumis
           sativus]
          Length = 305

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 8/97 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ALE+ +    K    R+ QL +       ++P+QI +WFQNRR R K +
Sbjct: 83  KKKRLNLEQVKALEKSFEVGNKLEPERKMQLAKAL----GLQPRQIAIWFQNRRARWKTK 138

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
           +     + + ++  A    L  +ND LQ Q ++L  E
Sbjct: 139 QLERDYEVLKKQFEA----LKADNDVLQAQNTKLHAE 171


>gi|356570052|ref|XP_003553206.1| PREDICTED: uncharacterized protein LOC100804328 [Glycine max]
          Length = 324

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 11/123 (8%)

Query: 28  GKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 87
           GK  R T+EQV+ L+  +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 80  GKTRRLTSEQVQFLQSNFEVENKLEPERKVQLAKEL----GMQPRQVAIWFQNRRARFKT 135

Query: 88  RK---EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           ++   +   L+     L      L++END+L+++V+ L      +  + +    + D SC
Sbjct: 136 KQLETDYGMLKASYHVLKRDYDNLLQENDKLKEEVNSL----NRLIPREQEEQNSDDTSC 191

Query: 145 DSV 147
           D+V
Sbjct: 192 DTV 194


>gi|125585080|gb|EAZ25744.1| hypothetical protein OsJ_09581 [Oryza sativa Japonica Group]
          Length = 390

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 7/93 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 130 KKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRRARWKTK 185

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQ 118
           +       + R+L A+   N  L+  N +LQ +
Sbjct: 186 QLEKDYDALKRQLDAVKAENDALLNHNKKLQAE 218


>gi|224111264|ref|XP_002315797.1| predicted protein [Populus trichocarpa]
 gi|222864837|gb|EEF01968.1| predicted protein [Populus trichocarpa]
          Length = 296

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 8/109 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 81  KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 136

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP 137
           +       + R+  A+      END LQ Q  +L  E   +K +  T P
Sbjct: 137 QLEKDYDLLKRQFDAIKA----ENDALQAQNQKLHAEILTLKSREPTEP 181


>gi|388520429|gb|AFK48276.1| unknown [Medicago truncatula]
          Length = 218

 Score = 52.0 bits (123), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R + EQV+ALE+ +    K    R+ QL +       ++P+Q+ +WFQNRR R K +
Sbjct: 96  KKKRLSLEQVKALEKSFEIGNKLEPERKMQLAKAL----GLQPRQVAIWFQNRRARWKTK 151

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
              KE   L+     L A N  L  +N++L  ++  L
Sbjct: 152 QLEKEYEVLKKQFDSLKADNNTLKAQNNKLHAELQTL 188


>gi|115475738|ref|NP_001061465.1| Os08g0292000 [Oryza sativa Japonica Group]
 gi|38175461|dbj|BAD01388.1| putative OCL3 protein [Oryza sativa Japonica Group]
 gi|113623434|dbj|BAF23379.1| Os08g0292000 [Oryza sativa Japonica Group]
          Length = 786

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 36/143 (25%)

Query: 1   MAMVIQQQQQQQRESSS-----GSINKHQ---LDNG-------------KYVRYTAEQVE 39
           +  ++Q+ QQQ+  +++     GS N+ +   L  G             +Y   T +Q E
Sbjct: 15  LKFILQKDQQQEPHTANLLVLLGSSNQDKRNGLSQGENRMDTCTRKKPRRYQLLTMQQKE 74

Query: 40  ALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNR 99
            L R +  CP P     ++L +E     N+   QIK WFQN  CR K +K          
Sbjct: 75  TLNRAFQSCPNPDRNDLKKLAKEL----NMTETQIKYWFQN--CRTKMKK---------F 119

Query: 100 KLTAMNKLLMEENDRLQKQVSQL 122
           K     KLL +EN+ L+K+ ++L
Sbjct: 120 KNNEERKLLQKENEELKKENAEL 142


>gi|380088838|emb|CCC13273.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 724

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 3/59 (5%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 87
           K  R T +Q   L   +++ P P +  R++L RE P LS   P+Q++VWFQNRR + K+
Sbjct: 225 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIKR 280


>gi|293335205|ref|NP_001170401.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
 gi|224035649|gb|ACN36900.1| unknown [Zea mays]
 gi|414589431|tpg|DAA40002.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 283

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQ---QLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           R TAEQV  LE  + E  +    +R+   +   E      I P+Q+ VWFQNRR R + +
Sbjct: 93  RLTAEQVRELELSFEEEKRKLEPKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWRSK 152

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
              ++  RL+  +  L A    L+ +NDRL+ QV  L 
Sbjct: 153 QLEQDFDRLRAAHDDLIAGRDALLADNDRLRSQVITLT 190


>gi|115481926|ref|NP_001064556.1| Os10g0404900 [Oryza sativa Japonica Group]
 gi|75165783|sp|Q94GL5.1|HOX23_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX23; AltName:
           Full=HD-ZIP protein HOX23; AltName: Full=Homeodomain
           transcription factor HOX23; AltName: Full=OsHox23
 gi|187609446|sp|A2Z734.1|HOX23_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX23; AltName:
           Full=HD-ZIP protein HOX23; AltName: Full=Homeodomain
           transcription factor HOX23; AltName: Full=OsHox23
 gi|15217320|gb|AAK92664.1|AC090487_6 Putative homeotic protein [Oryza sativa Japonica Group]
 gi|31431979|gb|AAP53678.1| HAHB-1, putative [Oryza sativa Japonica Group]
 gi|113639165|dbj|BAF26470.1| Os10g0404900 [Oryza sativa Japonica Group]
 gi|125531853|gb|EAY78418.1| hypothetical protein OsI_33507 [Oryza sativa Indica Group]
          Length = 351

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R + EQV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 104 KKRRLSVEQVRTLERSFESGNKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTK 159

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQL 122
           +       + R+L A    N  L+  N +L  ++  L
Sbjct: 160 QLEKDFDALRRQLDAARAENDALLSLNSKLHAEIVAL 196


>gi|297828596|ref|XP_002882180.1| homeobox-leucine zipper protein hat5 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328020|gb|EFH58439.1| homeobox-leucine zipper protein hat5 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 268

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 66  KKRRLTTEQVHLLEKSFETENKLEPDRKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 121

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
              ++   L++   +L +    ++++ND+L+ +V+ L 
Sbjct: 122 QLERDYDLLKSTYDQLLSNYDSIVKDNDKLRSEVTSLT 159


>gi|113205174|gb|AAT40518.2| Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum]
          Length = 307

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 8/97 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 79  KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 134

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
           +     + + R+  A+      END LQ Q  +L  E
Sbjct: 135 QLEKDYEVLKRQFDAIKA----ENDALQTQNQKLHAE 167


>gi|449505859|ref|XP_004162588.1| PREDICTED: homeobox-leucine zipper protein HAT7-like [Cucumis
           sativus]
          Length = 305

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 8/97 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ALE+ +    K    R+ QL +       ++P+QI +WFQNRR R K +
Sbjct: 83  KKKRLNLEQVKALEKSFEVGNKLEPERKMQLAKAL----GLQPRQIAIWFQNRRARWKTK 138

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
           +     + + ++  A    L  +ND LQ Q ++L  E
Sbjct: 139 QLERDYEVLKKQFEA----LKADNDVLQAQNTKLHAE 171


>gi|302781508|ref|XP_002972528.1| hypothetical protein SELMODRAFT_97273 [Selaginella moellendorffii]
 gi|300159995|gb|EFJ26614.1| hypothetical protein SELMODRAFT_97273 [Selaginella moellendorffii]
          Length = 97

 Score = 51.6 bits (122), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 9/98 (9%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R + +QV +LE  +    K    R++QL  E      ++P+Q+ VWFQNRR R K +
Sbjct: 2   KKRRLSVDQVRSLELNFEMENKLEPERKKQLAHEL----GLQPRQVAVWFQNRRARWKTK 57

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL-VCE 125
           +    L+     L A    L+ EN +LQ +VS + VCE
Sbjct: 58  Q----LERDYESLKASYDKLLLENKKLQAEVSSVSVCE 91


>gi|558491|gb|AAB31260.1| LIM-type homeodomain [Mus sp.]
          Length = 230

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
          TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 5  TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 60

Query: 93 R 93
          R
Sbjct: 61 R 61


>gi|392869529|gb|EAS28038.2| hypothetical protein CIMG_08965 [Coccidioides immitis RS]
          Length = 665

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 7/108 (6%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +N+   ++  WFQNRR +
Sbjct: 70  VENLSRPRLTKEQVETLEAQFQAQPKPTSNVKRQLA----MQTNLTLPRVANWFQNRRAK 125

Query: 85  EKQRK---EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYM 129
           EKQ+K   E  R+Q +        + +    D  + Q +  V  + +M
Sbjct: 126 EKQQKRQEEFKRMQAMKSSENLKREEISSSTDARRTQYADKVSGSDHM 173


>gi|194758653|ref|XP_001961576.1| GF14867 [Drosophila ananassae]
 gi|190615273|gb|EDV30797.1| GF14867 [Drosophila ananassae]
          Length = 550

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 253 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 308

Query: 96  TVNRK 100
               K
Sbjct: 309 MQQEK 313


>gi|16334|emb|CAA44513.1| Athb-3 [Arabidopsis thaliana]
          Length = 151

 Score = 51.6 bits (122), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 7/118 (5%)

Query: 5   IQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           +  Q Q   E +      H +   K  R   EQV ALE+ +    K    R+ QL +   
Sbjct: 28  MNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKAL- 86

Query: 65  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRK---LTAMNKLLMEENDRLQKQV 119
               ++P+QI +WFQNRR R K ++      ++ ++   L + N  L+  N +L  +V
Sbjct: 87  ---GLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAEV 141


>gi|116788135|gb|ABK24769.1| unknown [Picea sitchensis]
          Length = 201

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV ALE+ +    K    ++ QL +       ++P+QI VWFQNRR R K +
Sbjct: 87  KKRRLTLEQVRALEKNFEIANKLEPEKKMQLAKAL----GLQPRQIAVWFQNRRARWKTK 142

Query: 89  KEASRLQTVNRKLTAMNK---LLMEENDRLQKQV 119
           +       + +   A+ +    LMEEN+ LQ  V
Sbjct: 143 QLEKDFNVLKQDYDALKQDYDNLMEENNNLQAMV 176


>gi|297850974|ref|XP_002893368.1| ATHB23 [Arabidopsis lyrata subsp. lyrata]
 gi|297339210|gb|EFH69627.1| ATHB23 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQ++ALE+ +    K  S R+ +L R       ++P+QI +WFQNRR R K +
Sbjct: 71  KKRRLNMEQLKALEKNFELGNKLESDRKLELARAL----GLQPRQIAIWFQNRRARSKTK 126

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQV 119
           +       + R+  ++   N++L  +N +LQ QV
Sbjct: 127 QLEKDYDMLKRQFESLRNENEVLQTQNQKLQAQV 160


>gi|307950977|gb|ADN97191.1| A2 mating-type protein [Phanerochaete chrysosporium]
          Length = 499

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 4/93 (4%)

Query: 5   IQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           ++Q   ++RE  +  +  H L+  +   +  E    LE  +S  P P+ L +++L R   
Sbjct: 138 LEQFVTRKREEVAHRVTMHSLEGRERSLFNQEATPTLEHAFSTTPYPTRLEKERLARH-- 195

Query: 65  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTV 97
             + +E +QI VWFQNRR R K+  +  + Q +
Sbjct: 196 --TGMEYRQIHVWFQNRRNRSKKGGQPMKKQQI 226


>gi|22326632|ref|NP_196289.2| homeobox-leucine zipper protein HAT14 [Arabidopsis thaliana]
 gi|90101577|sp|P46665.3|HAT14_ARATH RecName: Full=Homeobox-leucine zipper protein HAT14; AltName:
           Full=Homeodomain-leucine zipper protein HAT14;
           Short=HD-ZIP protein 14
 gi|110743069|dbj|BAE99427.1| homeobox protein [Arabidopsis thaliana]
 gi|167730916|emb|CAD24012.2| homeodomain-leucine zipper protein HAT14 [Arabidopsis thaliana]
 gi|332003670|gb|AED91053.1| homeobox-leucine zipper protein HAT14 [Arabidopsis thaliana]
          Length = 336

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 17/146 (11%)

Query: 12  QRESSSGSINKHQLDNG---KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSN 68
           +R +S  S   +  +NG   K +R + +Q   LE  + E    S+L  +Q I     L N
Sbjct: 170 ERSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKE---HSTLNPKQKIALAKQL-N 225

Query: 69  IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL----VC 124
           + P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK+V +L      
Sbjct: 226 LRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTLKTS 281

Query: 125 ENGYMKQQLRTAPATTDASCDSVVTT 150
              YM  QL     T   SC+ V T+
Sbjct: 282 TPFYM--QLPATTLTMCPSCERVATS 305


>gi|218200868|gb|EEC83295.1| hypothetical protein OsI_28655 [Oryza sativa Indica Group]
          Length = 790

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 15/94 (15%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y   T +Q E L R +  CP P     ++L +E     N+   QIK WFQN  CR K +
Sbjct: 64  RYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKEL----NMTETQIKYWFQN--CRTKMK 117

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           K          K     KLL +EN+ L+K+ ++L
Sbjct: 118 K---------FKNNEERKLLQKENEELKKENAEL 142


>gi|21668482|dbj|BAC01272.1| LIM homeobox protein 4 [Homo sapiens]
          Length = 240

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
          TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 15 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 70

Query: 93 R 93
          R
Sbjct: 71 R 71


>gi|7340664|emb|CAB82944.1| homeodomain-like protein [Arabidopsis thaliana]
 gi|9758007|dbj|BAB08604.1| homeodomain-like protein [Arabidopsis thaliana]
          Length = 236

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T+ Q+ +LER + E  K  S R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 78  KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWK-- 131

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQ---LVCENGYMKQQLRTAPATTDASCD 145
             A +L+ +   L     ++  E   L  +V +   L+ + G +K+Q+           D
Sbjct: 132 --AKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTIKVSGEED 189

Query: 146 SV 147
           +V
Sbjct: 190 TV 191


>gi|222640282|gb|EEE68414.1| hypothetical protein OsJ_26774 [Oryza sativa Japonica Group]
          Length = 922

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 15/94 (15%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y   T +Q E L R +  CP P     ++L +E     N+   QIK WFQN  CR K +
Sbjct: 196 RYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKEL----NMTETQIKYWFQN--CRTKMK 249

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           K          K     KLL +EN+ L+K+ ++L
Sbjct: 250 K---------FKNNEERKLLQKENEELKKENAEL 274


>gi|193237555|dbj|BAG50054.1| transcription factor Homeobox [Lotus japonicus]
          Length = 284

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T+EQV  LE+ + E  K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 65  KKRRLTSEQVNLLEKSFEEENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 120

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
              ++   L++    L A    + +EN++L+ +V  L
Sbjct: 121 QLERDYDVLKSSYDSLLATYDTIAKENEKLKSEVVSL 157


>gi|357533803|gb|AET82955.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533855|gb|AET82981.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533901|gb|AET83004.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
          Length = 146

 Score = 51.6 bits (122), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQ  ALE+ +    K    ++ QL +       ++P+QI VWFQNRR R K +
Sbjct: 34  KKRRLTLEQARALEKNFEMANKLEPEKKMQLAKAL----GLQPRQIAVWFQNRRARWKTK 89

Query: 89  KEASRLQTVNRKLTAMNK---LLMEENDRLQKQVSQL 122
           +       +     ++ +    LMEEN+ +Q  + +L
Sbjct: 90  QLEKDFNILKHDYDSLKQNYDNLMEENNNIQAMIERL 126


>gi|20339337|gb|AAM19349.1| LIM homeobox protein [Homo sapiens]
          Length = 239

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
          TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 14 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 69

Query: 93 R 93
          R
Sbjct: 70 R 70


>gi|157115167|ref|XP_001652548.1| lim homeobox protein [Aedes aegypti]
 gi|108876992|gb|EAT41217.1| AAEL007120-PA [Aedes aegypti]
          Length = 459

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 5/79 (6%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           S GS++    +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++
Sbjct: 188 SDGSLDGESSNKRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQD----TGLDMRVVQ 243

Query: 76  VWFQNRRCREKQ-RKEASR 93
           VWFQNRR +EK+ +K+A R
Sbjct: 244 VWFQNRRAKEKRLKKDAGR 262


>gi|349379|gb|AAA63765.1| HAHB-1 [Helianthus annuus]
          Length = 313

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ L+R +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 92  KKRRLNMEQVKTLQRNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 147

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
           +       + R+  A+      END LQ Q  +L  E
Sbjct: 148 QLEKDYDALKRQFEAVKA----ENDSLQSQNHKLHAE 180


>gi|157127146|ref|XP_001661055.1| lim homeobox protein [Aedes aegypti]
 gi|108873020|gb|EAT37245.1| AAEL010744-PA [Aedes aegypti]
          Length = 459

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 5/79 (6%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           S GS++    +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++
Sbjct: 188 SDGSLDGESSNKRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQD----TGLDMRVVQ 243

Query: 76  VWFQNRRCREKQ-RKEASR 93
           VWFQNRR +EK+ +K+A R
Sbjct: 244 VWFQNRRAKEKRLKKDAGR 262


>gi|395530909|ref|XP_003767529.1| PREDICTED: uncharacterized protein LOC100914829 [Sarcophilus
           harrisii]
          Length = 659

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 434 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 489

Query: 93  R 93
           R
Sbjct: 490 R 490


>gi|358392262|gb|EHK41666.1| hypothetical protein TRIATDRAFT_287108 [Trichoderma atroviride IMI
           206040]
          Length = 842

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T +Q   L   +++ P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 380 KRFRLTHQQTRFLTSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 434

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQ 116
               RL   +R      + + ++ D +Q
Sbjct: 435 ----RLNADDRDRMIKMRAVPDDFDNVQ 458


>gi|242768031|ref|XP_002341487.1| homeobox  transcription factor, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218724683|gb|EED24100.1| homeobox transcription factor, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 725

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 7/83 (8%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 89
           R T EQV+ LE  +   PKP+S ++    RE  + +N+   ++  WFQNRR + KQ+K  
Sbjct: 69  RLTKEQVDTLEAQFQAHPKPNSNKK----RELAVQTNLSLPRVANWFQNRRAKAKQQKRQ 124

Query: 90  -EASRLQTVNRKLTAMNKLLMEE 111
            E  R+Q   ++     K + EE
Sbjct: 125 EEFERMQREAKEKDEQAKPIKEE 147


>gi|165968281|gb|ABY75950.1| At5g03790-like protein [Arabidopsis lyrata]
          Length = 193

 Score = 51.2 bits (121), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 11/108 (10%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T+ Q+ +LER + E  K  S R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 37  KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWK-- 90

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL---VCENGYMKQQL 133
             A +L+ +   L     ++  E   L ++V +L   + + G +K+Q+
Sbjct: 91  --AKQLEQLYDSLRQEYDVVSREKQMLHEEVKKLRAILRDQGLIKKQI 136


>gi|156552953|ref|XP_001603153.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Nasonia
           vitripennis]
          Length = 458

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++  A + Q
Sbjct: 246 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIAMKQQ 301

Query: 96  TVNRK 100
               K
Sbjct: 302 MQQEK 306


>gi|224133390|ref|XP_002328030.1| predicted protein [Populus trichocarpa]
 gi|222837439|gb|EEE75818.1| predicted protein [Populus trichocarpa]
          Length = 179

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 8/116 (6%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           R   +Q+  LE  ++   K  +  + +L R+      + PKQ+ +W+QNRR R K   +A
Sbjct: 23  RLARDQLNLLETSFNANQKLKAEHKTELARQL----GVPPKQVAIWYQNRRARHK--NDA 76

Query: 92  SRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSV 147
                +N +L   N  ++ EN RL+KQVS L  E   ++Q +   P ++ A+  SV
Sbjct: 77  IEHDYMNIQLELGN--VLAENIRLEKQVSMLKFELNKVQQMILFGPTSSAATLPSV 130


>gi|413952729|gb|AFW85378.1| hypothetical protein ZEAMMB73_822854 [Zea mays]
          Length = 548

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/288 (21%), Positives = 115/288 (39%), Gaps = 40/288 (13%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGNAGTIELLYTQA 264
            +R  GLV +    + ++  D   W           ++++V      G + ++ ++Y + 
Sbjct: 116 GSRDSGLVFMSAVALVDVFMDTNKWMEFFPGIVSKAQTVDVLVNGLCGRSESLIMMYEEL 175

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
           +  T + P R+   LRY   ++ G   V + SL G       A      R+  +PSGCLI
Sbjct: 176 HIMTPVVPTRELSFLRYCKQIEQGLWAVADVSLDGQ----RDAHYGVPSRSRRMPSGCLI 231

Query: 325 RPCDGGGSIIHIVDHLNLE-----------------AWSVPEVLRPLYESSKVVAQRMTI 367
                G S +  V+HL +E                 A+     L  L  + +  A   T+
Sbjct: 232 ADMSNGYSKVTWVEHLEIEHMLPINVLYRNLVLSGAAFGAHRWLAALQRACERFASLATL 291

Query: 368 AETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
                +V          +   SQR+   F  +++      W+L++  G  DV + V++ +
Sbjct: 292 GVPHHDVAGVTPEGKRSMMRLSQRMVSSFCASLSSSPLQRWTLLS--GTTDVSVCVSTHR 349

Query: 428 SLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
             ST S   N      G++ + A+ +   VP   +  F+R+   RS+W
Sbjct: 350 --STDSGQPN------GVVLSAATSIWLPVPGDHVFAFVRDENARSQW 389


>gi|145357610|ref|NP_195999.2| homeobox 51 [Arabidopsis thaliana]
 gi|374095369|sp|Q9LZR0.2|ATB51_ARATH RecName: Full=Putative homeobox-leucine zipper protein ATHB-51;
           AltName: Full=HD-ZIP protein ATHB-51; AltName:
           Full=Homeodomain transcription factor ATHB-51
 gi|332003271|gb|AED90654.1| homeobox 51 [Arabidopsis thaliana]
          Length = 235

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T+ Q+ +LER + E  K  S R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 77  KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWK-- 130

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQ---LVCENGYMKQQLRTAPATTDASCD 145
             A +L+ +   L     ++  E   L  +V +   L+ + G +K+Q+           D
Sbjct: 131 --AKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTIKVSGEED 188

Query: 146 SV 147
           +V
Sbjct: 189 TV 190


>gi|449266486|gb|EMC77539.1| LIM/homeobox protein Lhx4, partial [Columba livia]
          Length = 236

 Score = 51.2 bits (121), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 140 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 195

Query: 93  R 93
           R
Sbjct: 196 R 196


>gi|165968273|gb|ABY75946.1| At5g03790 [Arabidopsis thaliana]
          Length = 192

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 17/144 (11%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T+ Q+ +LER + E  K  S R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 36  KKKRLTSGQLASLERSFQEEDKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWK-- 89

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQ---LVCENGYMKQQLRTAPATTDASCD 145
             A +L+ +   L     ++  E   L  +V +   L+ + G +K+Q+           D
Sbjct: 90  --AKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTIKVSGEED 147

Query: 146 S------VVTTPQHSLRDANNPAG 163
           +      VV  P+    +AN   G
Sbjct: 148 TVEISSVVVAHPRTENMNANQITG 171


>gi|125542579|gb|EAY88718.1| hypothetical protein OsI_10193 [Oryza sativa Indica Group]
          Length = 384

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 7/93 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 124 KKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRRARWKTK 179

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQ 118
           +       + R+L A+   N  L+  N +LQ +
Sbjct: 180 QLEKDYDALKRQLDAVKAENDALLNHNKKLQAE 212


>gi|297734030|emb|CBI15277.3| unnamed protein product [Vitis vinifera]
          Length = 263

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R TA+QV+ LER +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 71  KKRRLTADQVQFLERNFEVENKLEPERKVQLAKDL----GLQPRQVAIWFQNRRARWKTK 126

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQV 119
              K+   LQ     L A  + L++E D L+ +V
Sbjct: 127 QLEKDFGALQASYNSLKAEYENLLKEKDELKTEV 160


>gi|47225812|emb|CAF98292.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 360

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 37/55 (67%), Gaps = 4/55 (7%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           T +Q+  L   Y+  P+P +L ++QL+     ++ + P+ ++VWFQN+RC++K+R
Sbjct: 199 TEKQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVVRVWFQNKRCKDKKR 249


>gi|297823473|ref|XP_002879619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325458|gb|EFH55878.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 179

 Score = 51.2 bits (121), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 64/112 (57%), Gaps = 14/112 (12%)

Query: 27  NGKYVR---YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           NGK  R    T+EQ++ LE  + E  K +  R+ +L +E      ++P+QI VWFQNR+ 
Sbjct: 68  NGKEKRKKKMTSEQLKFLETSFQEEIKLNPDRKMKLSKEI----GLQPRQIAVWFQNRKA 123

Query: 84  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL---VCENGYMKQQ 132
           R K ++     +++ ++   +++    E + LQ++++QL   + ENG  K++
Sbjct: 124 RWKNKQLEHLYESLRQEFDVVSR----EKELLQEELTQLKSMIRENGSSKKK 171


>gi|258570165|ref|XP_002543886.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237904156|gb|EEP78557.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 697

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 7/76 (9%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +N+   ++  WFQNRR +
Sbjct: 70  VENLSRPRLTKEQVETLEAQFQAQPKPTSNIKRQLA----VQTNLTLPRVANWFQNRRAK 125

Query: 85  EKQRK---EASRLQTV 97
           EKQ+K   E  R+Q +
Sbjct: 126 EKQQKRQEEFKRMQAM 141


>gi|224124266|ref|XP_002319288.1| predicted protein [Populus trichocarpa]
 gi|222857664|gb|EEE95211.1| predicted protein [Populus trichocarpa]
          Length = 438

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 115/280 (41%), Gaps = 42/280 (15%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW---FRDCRS----LEVFTMFPAGNAG-TIELLYTQ 263
           A+R  G V ++ T + E L D   W   F +  S    L V +   AGN   T++++  +
Sbjct: 77  ASRHIGFVRMDATSLVECLMDVKQWSSVFSNIVSRTTVLGVLSRGVAGNYNETLQVMKAE 136

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
            + PT L   R+    RY   +  G+  V + SL      P        V     PSGCL
Sbjct: 137 FHMPTPLVNIRESQFARYCKQIGPGTWGVVDVSLDSLFPYP-------LVIFRRRPSGCL 189

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPL------YESSKVVAQRMTIAETSGEVV-- 375
           I     G S +  V+H+ ++   V  +  P+      + + + VA  +   E  G ++  
Sbjct: 190 IVEMPDGYSKVIWVEHVEVDNKFVHRMFWPIVLPGFAFSAMRWVASIVRHCEPVGNIIST 249

Query: 376 ------YGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGW-SLMTCDGAEDVIIAVNSTKS 428
                      + +VLR  ++R+ R F    +   D+ W  +  CDG ED  +   +  +
Sbjct: 250 SLDSATIPRNGKTSVLR-LARRMMRSFYHDNSASTDNFWVRIHLCDG-EDFRLMTKTIYA 307

Query: 429 LSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE 468
           L+   +P+++L F         + L    PP  +  FLR 
Sbjct: 308 LN--GSPSSTLVF--------TTSLWVPAPPKRVFDFLRH 337


>gi|18396130|ref|NP_564268.1| homeobox-leucine zipper protein ATHB-23 [Arabidopsis thaliana]
 gi|75155843|sp|Q8LFD3.1|ATB23_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-23; AltName:
           Full=HD-ZIP protein ATHB-23; AltName: Full=Homeodomain
           transcription factor ATHB-23
 gi|21537134|gb|AAM61475.1| putative DNA-binding protein [Arabidopsis thaliana]
 gi|32815953|gb|AAP88361.1| At1g26960 [Arabidopsis thaliana]
 gi|110736089|dbj|BAF00017.1| putative DNA-binding protein [Arabidopsis thaliana]
 gi|332192643|gb|AEE30764.1| homeobox-leucine zipper protein ATHB-23 [Arabidopsis thaliana]
          Length = 255

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQ++ALE+ +    K  S R+ +L R       ++P+QI +WFQNRR R K +
Sbjct: 71  KKRRLNMEQLKALEKDFELGNKLESDRKLELARAL----GLQPRQIAIWFQNRRARSKTK 126

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQV 119
           +       + R+  ++   N++L  +N +LQ QV
Sbjct: 127 QLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQV 160


>gi|357148036|ref|XP_003574599.1| PREDICTED: homeobox-leucine zipper protein HOX27-like [Brachypodium
           distachyon]
          Length = 346

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 23/141 (16%)

Query: 13  RESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPK 72
           R SS  S +       K +R + +Q   LE  + E    S+L  +Q +     L N+ P+
Sbjct: 158 RSSSRASDDDEGASARKKLRLSKDQSAFLEESFKEH---STLNPKQKVALAKQL-NLRPR 213

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           Q++VWFQNRR R K ++     + + R      + L EEN RL K++S+L        + 
Sbjct: 214 QVEVWFQNRRARTKLKQTEVDCEYLKR----CCETLTEENRRLHKELSEL--------RA 261

Query: 133 LRTA-------PATTDASCDS 146
           L+TA       PATT + C S
Sbjct: 262 LKTAQPFYMHLPATTLSMCPS 282


>gi|157119485|ref|XP_001653405.1| insulinprotein enhancer protein isl [Aedes aegypti]
 gi|108883188|gb|EAT47413.1| AAEL001500-PA, partial [Aedes aegypti]
          Length = 398

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 211 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 266

Query: 96  TVNRK 100
               K
Sbjct: 267 MQQEK 271


>gi|295798064|emb|CBL87029.1| lim3 protein [Tribolium castaneum]
          Length = 223

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 5/63 (7%)

Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
          TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 16 TAKQLETLKNAYNNSPKPARHVREQLSQD----TGLDMRVVQVWFQNRRAKEKRLKKDAG 71

Query: 93 RLQ 95
          R +
Sbjct: 72 RTR 74


>gi|324120795|dbj|BAJ78787.1| Islet homologue protein [Lethenteron camtschaticum]
          Length = 284

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 37/53 (69%), Gaps = 4/53 (7%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Q++ L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 124 KQLQTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 172


>gi|157830485|pdb|1BW5|A Chain A, The Nmr Solution Structure Of The Homeodomain Of The Rat
          Insulin Gene Enhancer Protein Isl-1, 50 Structures
          Length = 66

 Score = 51.2 bits (121), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 36/53 (67%), Gaps = 4/53 (7%)

Query: 36 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
          +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 13 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 61


>gi|356562808|ref|XP_003549660.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Glycine max]
          Length = 329

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 14/121 (11%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R +  QV+ LE+ + E  K    R+ +L ++      + P+Q+ +WFQNRR R K +
Sbjct: 82  KKRRLSMNQVQFLEKSFEEENKLEPERKTKLAKDL----GLRPRQVAIWFQNRRARWKTK 137

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV-------CENGYMKQQLRTAPA 138
              K+   L      L +    L++E D L+ +V+ L         + G+MKQQ  +   
Sbjct: 138 TLEKDYEALHASFENLKSNYDSLLKEKDNLKAEVASLNEKVLARGKQEGHMKQQAESEEE 197

Query: 139 T 139
           T
Sbjct: 198 T 198


>gi|158299279|ref|XP_319393.4| AGAP010209-PA [Anopheles gambiae str. PEST]
 gi|157014289|gb|EAA13793.5| AGAP010209-PA [Anopheles gambiae str. PEST]
          Length = 451

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 254 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 309

Query: 96  TVNRK 100
               K
Sbjct: 310 MQQEK 314


>gi|410908008|ref|XP_003967483.1| PREDICTED: insulin gene enhancer protein ISL-2A-like [Takifugu
           rubripes]
          Length = 359

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 37/55 (67%), Gaps = 4/55 (7%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           T +Q+  L   Y+  P+P +L ++QL+     ++ + P+ ++VWFQN+RC++K+R
Sbjct: 199 TEKQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVVRVWFQNKRCKDKKR 249


>gi|389627356|ref|XP_003711331.1| hypothetical protein MGG_07437 [Magnaporthe oryzae 70-15]
 gi|351643663|gb|EHA51524.1| hypothetical protein MGG_07437 [Magnaporthe oryzae 70-15]
 gi|440469023|gb|ELQ38150.1| hypothetical protein OOU_Y34scaffold00552g105 [Magnaporthe oryzae
           Y34]
 gi|440483170|gb|ELQ63598.1| hypothetical protein OOW_P131scaffold00967g4 [Magnaporthe oryzae
           P131]
          Length = 714

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 3/59 (5%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 87
           K  R T +Q   L   +++ P P +  R++L RE P LS   P+Q++VWFQNRR + K+
Sbjct: 226 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIKR 281


>gi|20502369|dbj|BAB91364.1| LIM homeodomain protein [Branchiostoma belcheri]
          Length = 402

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L++ Y   PKP+   R+QL +E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 177 TAKQLETLKQAYQNSPKPARHVREQLSQE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 232

Query: 93  R 93
           R
Sbjct: 233 R 233


>gi|414869823|tpg|DAA48380.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 448

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 31/129 (24%)

Query: 29  KYVRYTAEQVEALERVYSE----CPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           K +R + EQ   LE  + E     PK  +   +QL        N+ P+Q++VWFQNRR R
Sbjct: 265 KKLRLSKEQSAFLEESFKEHSTLNPKQKAALAKQL--------NLRPRQVEVWFQNRRAR 316

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA-------P 137
            K ++     + + R      + L EEN RL K++++L        + L+TA       P
Sbjct: 317 TKLKQTEVDCEYLKR----CCETLTEENRRLHKELAEL--------RALKTAPPFFMRLP 364

Query: 138 ATTDASCDS 146
           ATT + C S
Sbjct: 365 ATTLSMCPS 373


>gi|312282149|dbj|BAJ33940.1| unnamed protein product [Thellungiella halophila]
 gi|312283511|dbj|BAJ34621.1| unnamed protein product [Thellungiella halophila]
          Length = 274

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LE+ + +  K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 65  KKRRLTTEQVHLLEKSFEKENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 120

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
              ++   L++   +L +    +++END L+ Q++ L 
Sbjct: 121 QLERDFDLLKSTYDQLLSNYDSIVKENDLLRSQMASLA 158


>gi|357486709|ref|XP_003613642.1| Homeobox-leucine zipper protein [Medicago truncatula]
 gi|355514977|gb|AES96600.1| Homeobox-leucine zipper protein [Medicago truncatula]
          Length = 283

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ LE+ +    K    R+ QL R      N++P+Q+ +WFQNRR R K +
Sbjct: 77  KKRRLNMEQVKTLEKSFELGNKLEPERKMQLARAL----NLQPRQVAIWFQNRRARWKTK 132

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
           +       + R+  A+ KL   +ND LQ Q  +L  E
Sbjct: 133 QLEKDYDVLKRQYDAI-KL---DNDALQAQNQKLQAE 165


>gi|224102511|ref|XP_002312706.1| predicted protein [Populus trichocarpa]
 gi|222852526|gb|EEE90073.1| predicted protein [Populus trichocarpa]
          Length = 302

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 8/110 (7%)

Query: 8   QQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILS 67
           Q   + ESS    + H   + K  R TA QV+ LE+ +    K    R+ QL +E     
Sbjct: 59  QPHVKEESSDEDYDAHLKPSEKKRRLTAAQVQFLEKSFEAENKLEPERKMQLAKEL---- 114

Query: 68  NIEPKQIKVWFQNRRCREKQR---KEASRLQTVNRKLTA-MNKLLMEEND 113
            ++P+Q+ +WFQNRR R K +   ++   L+    KL A  +KLL+E+ +
Sbjct: 115 GLQPRQVAIWFQNRRARFKNKQLERDYDSLRISFDKLKADYDKLLLEKQN 164


>gi|166754|gb|AAA32816.1| homeobox protein, partial [Arabidopsis thaliana]
          Length = 100

 Score = 50.8 bits (120), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 5   KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 60

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
              ++   L++   +L +    ++ +ND+L+ +V+ L
Sbjct: 61  QLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSL 97


>gi|15232122|ref|NP_186796.1| homeobox-leucine zipper protein HAT5 [Arabidopsis thaliana]
 gi|399900|sp|Q02283.1|HAT5_ARATH RecName: Full=Homeobox-leucine zipper protein HAT5; AltName:
           Full=HD-ZIP protein ATHB-1; AltName: Full=Homeodomain
           transcription factor ATHB-1; AltName:
           Full=Homeodomain-leucine zipper protein HAT5;
           Short=HD-ZIP protein 5
 gi|6016706|gb|AAF01532.1|AC009325_2 homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5) (HD-ZIP
           protein ATHB-1) [Arabidopsis thaliana]
 gi|16329|emb|CAA41625.1| Athb-1 protein [Arabidopsis thaliana]
 gi|16648822|gb|AAL25601.1| AT3g01470/F4P13_2 [Arabidopsis thaliana]
 gi|20466121|gb|AAM19982.1| AT3g01470/F4P13_2 [Arabidopsis thaliana]
 gi|332640149|gb|AEE73670.1| homeobox-leucine zipper protein HAT5 [Arabidopsis thaliana]
          Length = 272

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 68  KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 123

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
              ++   L++   +L +    ++ +ND+L+ +V+ L 
Sbjct: 124 QLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLT 161


>gi|1708565|sp|P53409.1|ISL3_ONCTS RecName: Full=Insulin gene enhancer protein ISL-3; Short=Islet-3
          Length = 363

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 36/53 (67%), Gaps = 4/53 (7%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Q+  L   Y+  P+P +L R+QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 201 KQLHTLRTCYNANPRPDALMREQLVE----MTGLSPRVIRVWFQNKRCKDKKR 249


>gi|339252354|ref|XP_003371400.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
 gi|316968379|gb|EFV52660.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
          Length = 1751

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 47/76 (61%), Gaps = 5/76 (6%)

Query: 36   EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR-L 94
            +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K+++   + +
Sbjct: 1564 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKQLIMKQI 1619

Query: 95   QTVNRKLTAMNKLLME 110
            Q  + K   +N + M+
Sbjct: 1620 QQQHVKNQTLNGIRMQ 1635


>gi|295913409|gb|ADG57957.1| transcription factor [Lycoris longituba]
          Length = 195

 Score = 50.8 bits (120), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 10/121 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K +R   EQV+ LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 37  KKMRLKIEQVKTLEKNFEIGNKLEPERKMQLARAL----GLQPRQVAIWFQNRRARWKTK 92

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
           +       + R+  A+   N+ L   N +LQ ++  L    G    +L      T+ SC 
Sbjct: 93  QLEKDYDVLKRQFDAIRSENESLKAHNKKLQAEMMAL---KGRDTSELINLNKETEGSCS 149

Query: 146 S 146
           +
Sbjct: 150 N 150


>gi|341925954|dbj|BAK53866.1| insulin gene enhancer protein isl-1 [Dugesia japonica]
          Length = 517

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 37/54 (68%), Gaps = 4/54 (7%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K+R+
Sbjct: 316 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKRQ 365


>gi|170055943|ref|XP_001863808.1| lim homeobox protein [Culex quinquefasciatus]
 gi|167875776|gb|EDS39159.1| lim homeobox protein [Culex quinquefasciatus]
          Length = 456

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 5/79 (6%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           S GS++    +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++
Sbjct: 191 SDGSLDGESSNKRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQD----TGLDMRVVQ 246

Query: 76  VWFQNRRCREKQ-RKEASR 93
           VWFQNRR +EK+ +K+A R
Sbjct: 247 VWFQNRRAKEKRLKKDAGR 265


>gi|94039292|dbj|BAE93505.1| LIM homeobox protein 4 [Bos taurus]
          Length = 181

 Score = 50.8 bits (120), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 46  TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 101

Query: 93  R 93
           R
Sbjct: 102 R 102


>gi|380018327|ref|XP_003693083.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Apis florea]
          Length = 419

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 4/60 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++  A + Q
Sbjct: 213 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIAMKQQ 268


>gi|1076569|pir||S51929 homeotic protein CHB5 - carrot
          Length = 96

 Score = 50.8 bits (120), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 8/94 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ALE+ +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 4   KKRRLNLEQVKALEKSFELGNKLEPERKVQLARAL----GLQPRQIAIWFQNRRARWKTK 59

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           +       + R+  A    L  +ND L+ Q  +L
Sbjct: 60  QLERDYTILKRQFDA----LKADNDSLRTQNKKL 89


>gi|371573886|gb|AEX38313.1| Lhx3 [Mnemiopsis leidyi]
          Length = 507

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +KEA 
Sbjct: 274 TAKQLETLKTAYENSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRMKKEAP 329

Query: 93  R 93
           R
Sbjct: 330 R 330


>gi|119173966|ref|XP_001239344.1| hypothetical protein CIMG_08965 [Coccidioides immitis RS]
          Length = 627

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 7/108 (6%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +N+   ++  WFQNRR +
Sbjct: 70  VENLSRPRLTKEQVETLEAQFQAQPKPTSNVKRQLA----MQTNLTLPRVANWFQNRRAK 125

Query: 85  EKQRK---EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYM 129
           EKQ+K   E  R+Q +        + +    D  + Q +  V  + +M
Sbjct: 126 EKQQKRQEEFKRMQAMKSSENLKREEISSSTDARRTQYADKVSGSDHM 173


>gi|255563731|ref|XP_002522867.1| Homeobox protein FWA, putative [Ricinus communis]
 gi|223537951|gb|EEF39565.1| Homeobox protein FWA, putative [Ricinus communis]
          Length = 581

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 109/291 (37%), Gaps = 48/291 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW---FRDCRSLEVFTMFPA-----GNAG-TIELLYT 262
           A+R  G +    T I E L D   W   F    S      F +     GN   T++++  
Sbjct: 161 ASREMGFIHANATSIVECLMDLKQWSSAFSKVVSRATLLGFLSVGSMVGNYDETLQVIRA 220

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGC 322
           + + PT L P R+    RY   L++ +  V + SL      P        VR +  PSGC
Sbjct: 221 EFHVPTPLVPIRECQFARYCKRLNSNTWGVVDVSLENLFPYP-------IVRFQRRPSGC 273

Query: 323 LIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAE------------- 369
           LI+    G S +  V+H+ ++      + +PL  S      +  IA              
Sbjct: 274 LIQELPNGYSKVTWVEHVEVDNIVGSTIFQPLVLSGFAFGAKRWIASLIQHFERIATLMS 333

Query: 370 -----TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G  +   G++  ++   ++R+   F   ++G  ++ W      GAED  +   
Sbjct: 334 VEPIFMDGGSICQNGKRNLIM--LAERMMTKFVLDLSGSTNNLWMPFPVTGAEDFRMMTK 391

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           S    S  S  T +  +           L    PP+ +  FLR    R++W
Sbjct: 392 SIGDNSGWSITTIAFTY----------SLWLPAPPSRVFDFLRHEDCRNKW 432


>gi|405975209|gb|EKC39790.1| LIM/homeobox protein Lhx5 [Crassostrea gigas]
          Length = 471

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 4/85 (4%)

Query: 10  QQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNI 69
           ++  ++++GS N      G      A+Q+E L+  ++  PKP+   R+QL +E    + +
Sbjct: 242 EEMNDNTNGSSNAGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQE----TGL 297

Query: 70  EPKQIKVWFQNRRCREKQRKEASRL 94
             + I+VWFQNRR +E++ K+ S L
Sbjct: 298 NMRVIQVWFQNRRSKERRMKQLSAL 322


>gi|328793255|ref|XP_003251852.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Apis
           mellifera]
          Length = 418

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 4/60 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++  A + Q
Sbjct: 212 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIAMKQQ 267


>gi|24585132|ref|NP_724161.1| Lim3, isoform B [Drosophila melanogaster]
 gi|386769865|ref|NP_001246085.1| Lim3, isoform C [Drosophila melanogaster]
 gi|386769867|ref|NP_001246086.1| Lim3, isoform D [Drosophila melanogaster]
 gi|386769871|ref|NP_001246088.1| Lim3, isoform F [Drosophila melanogaster]
 gi|22946804|gb|AAF53758.2| Lim3, isoform B [Drosophila melanogaster]
 gi|124248338|gb|ABM92789.1| FI01025p [Drosophila melanogaster]
 gi|383291570|gb|AFH03759.1| Lim3, isoform C [Drosophila melanogaster]
 gi|383291571|gb|AFH03760.1| Lim3, isoform D [Drosophila melanogaster]
 gi|383291573|gb|AFH03762.1| Lim3, isoform F [Drosophila melanogaster]
          Length = 520

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 248 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 303

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 304 FQNRRAKEKRLKKDAGR 320


>gi|212542785|ref|XP_002151547.1| homeobox  transcription factor, putative [Talaromyces marneffei
           ATCC 18224]
 gi|210066454|gb|EEA20547.1| homeobox transcription factor, putative [Talaromyces marneffei ATCC
           18224]
          Length = 727

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 7/83 (8%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 89
           R T EQV+ LE  +   PKP+S ++    RE  + +N+   ++  WFQNRR + KQ+K  
Sbjct: 69  RLTKEQVDTLEAQFQAHPKPNSNKK----RELAVQTNLSLPRVANWFQNRRAKAKQQKRQ 124

Query: 90  -EASRLQTVNRKLTAMNKLLMEE 111
            E  R+Q   ++    +K + +E
Sbjct: 125 EEFERMQREAKEKEDQSKSIKDE 147


>gi|195345019|ref|XP_002039073.1| GM17030 [Drosophila sechellia]
 gi|194134203|gb|EDW55719.1| GM17030 [Drosophila sechellia]
          Length = 523

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 253 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 308

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 309 FQNRRAKEKRLKKDAGR 325


>gi|194759358|ref|XP_001961916.1| GF15212 [Drosophila ananassae]
 gi|190615613|gb|EDV31137.1| GF15212 [Drosophila ananassae]
          Length = 444

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 168 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 223

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 224 FQNRRAKEKRLKKDAGR 240


>gi|356567036|ref|XP_003551729.1| PREDICTED: homeobox-leucine zipper protein ATHB-20-like [Glycine
           max]
          Length = 268

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 11/108 (10%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ALE+ + +  K    R+ QL +       ++P+Q+ +WFQNRR R K +
Sbjct: 79  KKKRLNLEQVKALEKSFDQGNKLEPERKVQLAKAL----GLQPRQVAIWFQNRRARWKTK 134

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQV----SQLVCENGYM 129
           +     + + ++  A+   N +L   N +LQ ++    S+  CE G +
Sbjct: 135 QLEKEYEVLKKQFEAVKADNDVLKVRNQKLQAELQAVKSRDCCEAGII 182


>gi|116779239|gb|ABK21195.1| unknown [Picea sitchensis]
          Length = 309

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 14/124 (11%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K +R + EQ   LE  + E    +  ++Q L +      N+ P+Q++VWFQNRR R K +
Sbjct: 169 KKLRLSKEQSALLEESFKENSSLNPKQKQALAKRL----NLRPRQVEVWFQNRRARTKLK 224

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL----VCENGYMKQQLRTAPATTDASC 144
           +     + + R   +    L +EN RLQK++ +L    +    YM  Q+  A  T   SC
Sbjct: 225 QTEVDCEFLKRCCES----LTDENRRLQKELQELRALKLASPLYM--QMPAATLTMCPSC 278

Query: 145 DSVV 148
           + VV
Sbjct: 279 ERVV 282


>gi|310792453|gb|EFQ27980.1| homeobox domain-containing protein [Glomerella graminicola M1.001]
          Length = 666

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T +Q   L   +++ P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 203 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 257

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQ 116
               RL   +R      + + ++ D +Q
Sbjct: 258 ----RLTADDRDRMIKMRAVPDDFDNIQ 281


>gi|302771079|ref|XP_002968958.1| hypothetical protein SELMODRAFT_18217 [Selaginella moellendorffii]
 gi|302816653|ref|XP_002990005.1| hypothetical protein SELMODRAFT_18216 [Selaginella moellendorffii]
 gi|300142316|gb|EFJ09018.1| hypothetical protein SELMODRAFT_18216 [Selaginella moellendorffii]
 gi|300163463|gb|EFJ30074.1| hypothetical protein SELMODRAFT_18217 [Selaginella moellendorffii]
          Length = 87

 Score = 50.8 bits (120), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R + EQV +LE  +    +   +R+ QL +E      ++P+Q+ VWFQNRR R K +
Sbjct: 6   KKRRLSVEQVRSLELSFETENRLEPVRKMQLAQEL----GLQPRQVAVWFQNRRARWKTK 61

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQ 118
           +    L+     L A  + L EEN RL+ Q
Sbjct: 62  Q----LEKDYDVLKAAYESLAEENKRLKAQ 87


>gi|224140973|ref|XP_002323851.1| predicted protein [Populus trichocarpa]
 gi|222866853|gb|EEF03984.1| predicted protein [Populus trichocarpa]
          Length = 292

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 8/97 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ALE+ +    K    R+ QL +       ++P+QI +WFQNRR R K +
Sbjct: 78  KKKRLNLEQVKALEKSFELGNKLEPERKMQLAKAL----GLQPRQIAIWFQNRRARWKTK 133

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
           +     + + ++  A    L  +ND LQ Q  +L  E
Sbjct: 134 QLEKDYEVLKKQFDA----LKADNDALQAQNKKLHAE 166


>gi|260793678|ref|XP_002591838.1| LIM class homeodomain transcription factor, Lhx3 subclass
           [Branchiostoma floridae]
 gi|229277049|gb|EEN47849.1| LIM class homeodomain transcription factor, Lhx3 subclass
           [Branchiostoma floridae]
          Length = 402

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L++ Y   PKP+   R+QL +E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 177 TAKQLETLKQAYQNSPKPARHVREQLSQE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 232

Query: 93  R 93
           R
Sbjct: 233 R 233


>gi|147771542|emb|CAN73658.1| hypothetical protein VITISV_036092 [Vitis vinifera]
          Length = 284

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 13/155 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 137 KKLRLSKEQSAILEETFKEHNTLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 192

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDA---SCD 145
           +     + + R      + L EEN RLQK+V +L       +  +   P TT     SC+
Sbjct: 193 QTEVDCEYLKR----CCENLTEENRRLQKEVQELRTLKLSPQLYMHMNPPTTLTMCPSCE 248

Query: 146 SVVTTPQHSLRDANNPAGLLSIAE--ETLAEFLSK 178
            V   P   +  A+  A   S AE  E  ++++ K
Sbjct: 249 RVAVAPSFPIGPASTSAHAHSRAESLEATSKYVGK 283


>gi|356532702|ref|XP_003534910.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max]
          Length = 195

 Score = 50.8 bits (120), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 17/147 (11%)

Query: 6   QQQQQQQRESSSGSINKHQLDNG--KYVRYTAEQVEALERVYSECPKPSSLRRQQLIREC 63
           +++ +Q+  +   S + +  +NG  K ++ T EQ   LE ++      +  ++Q L  + 
Sbjct: 24  KKENEQKHPNDETSPDSNNSNNGSRKKLKLTKEQSATLEDIFKLHSTLNPAQKQALAEQL 83

Query: 64  PILSNIEPKQIKVWFQNRRCREKQRK---EASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
               N++ +Q++VWFQNRR R K ++   +   L+    KLT       +EN RL+K++ 
Sbjct: 84  ----NLKHRQVEVWFQNRRARTKLKQTEVDCEFLKKCCEKLT-------DENQRLKKELQ 132

Query: 121 QLVCEN-GYMKQQLRTAPATTDASCDS 146
           +L  +  G     ++ + ATT   C S
Sbjct: 133 ELRAQKIGPTPLYIQLSKATTLTICSS 159


>gi|340717324|ref|XP_003397134.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Bombus
           terrestris]
 gi|350407611|ref|XP_003488142.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Bombus
           impatiens]
          Length = 458

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 4/60 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++  A + Q
Sbjct: 252 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIAMKQQ 307


>gi|358389639|gb|EHK27231.1| hypothetical protein TRIVIDRAFT_117070, partial [Trichoderma virens
           Gv29-8]
          Length = 322

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T +Q   L   +++ P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 157 KRFRLTHQQTRFLTSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 211

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQ 116
               RL   +R      + + ++ D +Q
Sbjct: 212 ----RLNADDRDRMIKMRAVPDDFDNVQ 235


>gi|302909385|ref|XP_003050061.1| hypothetical protein NECHADRAFT_49051 [Nectria haematococca mpVI
           77-13-4]
 gi|256730998|gb|EEU44348.1| hypothetical protein NECHADRAFT_49051 [Nectria haematococca mpVI
           77-13-4]
          Length = 449

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T +Q   L   +++ P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 155 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 209

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQ 116
               RL   +R      + + E  D +Q
Sbjct: 210 ----RLNADDRDRMIKMRAVPEGFDNVQ 233


>gi|354492531|ref|XP_003508401.1| PREDICTED: rhox homeobox family member 2-like [Cricetulus griseus]
          Length = 179

 Score = 50.4 bits (119), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 4/60 (6%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
           ++T EQV  L+RV+ E   P +L+R++L      L N+E   +KVWF NRR + ++ ++A
Sbjct: 75  KFTPEQVVELDRVFEETHYPDALKRKKLAE----LINVEECTVKVWFNNRRAKLRKHQKA 130


>gi|356503487|ref|XP_003520539.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max]
          Length = 288

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 22/142 (15%)

Query: 10  QQQRESSSGSINKHQLDNG---KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPIL 66
           +  R+SS G+ +  +  NG   K +R + +Q   LE  + E    +  ++  L ++    
Sbjct: 108 RNNRKSSEGASDDDE--NGSSRKKLRLSKQQSAFLEDSFKEHTTLNPKQKLALAKQL--- 162

Query: 67  SNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL---- 122
            N+ P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK++ +L    
Sbjct: 163 -NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKELQELRALK 217

Query: 123 VCENGYMKQQLRTAPATTDASC 144
            C+  +M+      PATT   C
Sbjct: 218 TCQPFFMQ-----LPATTLTMC 234


>gi|312374311|gb|EFR21889.1| hypothetical protein AND_16082 [Anopheles darlingi]
          Length = 568

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 5/79 (6%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           S GS++    +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++
Sbjct: 300 SDGSLDGESSNKRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQD----TGLDMRVVQ 355

Query: 76  VWFQNRRCREKQ-RKEASR 93
           VWFQNRR +EK+ +K+A R
Sbjct: 356 VWFQNRRAKEKRLKKDAGR 374


>gi|28316900|gb|AAO39472.1| RE70568p [Drosophila melanogaster]
          Length = 523

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 251 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 306

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 307 FQNRRAKEKRLKKDAGR 323


>gi|195398039|ref|XP_002057632.1| GJ17996 [Drosophila virilis]
 gi|194141286|gb|EDW57705.1| GJ17996 [Drosophila virilis]
          Length = 545

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 252 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 307

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 308 FQNRRAKEKRLKKDAGR 324


>gi|383858654|ref|XP_003704814.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Megachile
           rotundata]
          Length = 416

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 4/60 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++  A + Q
Sbjct: 210 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIAMKQQ 265


>gi|302496935|ref|XP_003010468.1| homeobox  transcription factor, putative [Arthroderma benhamiae CBS
           112371]
 gi|291174011|gb|EFE29828.1| homeobox  transcription factor, putative [Arthroderma benhamiae CBS
           112371]
          Length = 716

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 6/91 (6%)

Query: 16  SSGSINKHQ--LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           ++G+I +++  ++N    R T EQVE LE  +   PKP+S  ++QL     + +++   +
Sbjct: 50  TTGAIEEYEEYVENLSRPRLTKEQVEILESQFQAHPKPNSNTKRQLA----LQTSLTLPR 105

Query: 74  IKVWFQNRRCREKQRKEASRLQTVNRKLTAM 104
           +  WFQNRR + KQ+K     + +  K  AM
Sbjct: 106 VANWFQNRRAKAKQQKRQEEFEKMQAKEKAM 136


>gi|442628307|ref|NP_001260559.1| Lim3, isoform G [Drosophila melanogaster]
 gi|440213916|gb|AGB93094.1| Lim3, isoform G [Drosophila melanogaster]
          Length = 555

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 248 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 303

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 304 FQNRRAKEKRLKKDAGR 320


>gi|303313929|ref|XP_003066973.1| Homeobox domain containing protein [Coccidioides posadasii C735
           delta SOWgp]
 gi|240106641|gb|EER24828.1| Homeobox domain containing protein [Coccidioides posadasii C735
           delta SOWgp]
          Length = 665

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 7/108 (6%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +N+   ++  WFQNRR +
Sbjct: 70  VENLSRPRLTKEQVETLEAQFRAQPKPTSNVKRQLA----MQTNLTLPRVANWFQNRRAK 125

Query: 85  EKQRK---EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYM 129
           EKQ+K   E  R+Q +        + +    D  + Q +  V    +M
Sbjct: 126 EKQQKRQEEFKRMQAMKSSENLKREEISSSTDARRTQYADKVSGPDHM 173


>gi|116180364|ref|XP_001220031.1| hypothetical protein CHGG_00810 [Chaetomium globosum CBS 148.51]
 gi|88185107|gb|EAQ92575.1| hypothetical protein CHGG_00810 [Chaetomium globosum CBS 148.51]
          Length = 641

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)

Query: 9   QQQQRESS-SGSINKHQLDNGK-YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPIL 66
           QQQ RE++  G  N H     +   R   ++VE LER +S+  KPSS  +++L  +    
Sbjct: 45  QQQHREAALMGQGNMHLSKPAEPKPRLAKDEVELLEREFSKNQKPSSSTKRELAEQM--- 101

Query: 67  SNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
             +E  +I  WFQNRR +EKQ K+ +  +
Sbjct: 102 -GVEVPRINNWFQNRRAKEKQIKKTAEFE 129


>gi|4106560|gb|AAD02889.1| LIM homeodomain transcription factor [Drosophila melanogaster]
          Length = 440

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 168 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 223

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 224 FQNRRAKEKRLKKDAGR 240


>gi|17136270|ref|NP_476606.1| Lim3, isoform A [Drosophila melanogaster]
 gi|7298537|gb|AAF53756.1| Lim3, isoform A [Drosophila melanogaster]
          Length = 440

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 168 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 223

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 224 FQNRRAKEKRLKKDAGR 240


>gi|195580083|ref|XP_002079885.1| GD21780 [Drosophila simulans]
 gi|194191894|gb|EDX05470.1| GD21780 [Drosophila simulans]
          Length = 438

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 168 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 223

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 224 FQNRRAKEKRLKKDAGR 240


>gi|195050066|ref|XP_001992820.1| GH13485 [Drosophila grimshawi]
 gi|193899879|gb|EDV98745.1| GH13485 [Drosophila grimshawi]
          Length = 451

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 168 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 223

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 224 FQNRRAKEKRLKKDAGR 240


>gi|194879752|ref|XP_001974294.1| GG21652 [Drosophila erecta]
 gi|190657481|gb|EDV54694.1| GG21652 [Drosophila erecta]
          Length = 442

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 168 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 223

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 224 FQNRRAKEKRLKKDAGR 240


>gi|399920241|gb|AFP55588.1| homeobox leucine zipper [Rosa rugosa]
          Length = 216

 Score = 50.4 bits (119), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 24/160 (15%)

Query: 5   IQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           +Q     +R+ ++ S N          R++ EQ++ LE ++    K    R+ Q+ RE  
Sbjct: 8   LQTHSTAKRKKNNKSQNSR--------RFSDEQIKLLESIFEADSKLEPRRKVQVAREL- 58

Query: 65  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRK---LTAMNKLLMEENDRLQKQVSQ 121
               ++P+Q+ +WFQNRR R K ++     +T+  +   L +  + L EE   L  Q+ +
Sbjct: 59  ---GLQPRQVAIWFQNRRARWKSKQIEQDFRTLRNEYDLLASKFESLKEEKQSLLIQLEK 115

Query: 122 L--------VCENGYMKQQLRTAPATTDASCDSVVTTPQH 153
           L        V E     + L  + +  D  C++    P H
Sbjct: 116 LNDLMGKTKVHEENMDGKDLEGS-SNKDGDCETTEEKPSH 154


>gi|198473411|ref|XP_001356286.2| GA10505 [Drosophila pseudoobscura pseudoobscura]
 gi|198139444|gb|EAL33349.2| GA10505 [Drosophila pseudoobscura pseudoobscura]
          Length = 491

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 225 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 280

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 281 FQNRRAKEKRLKKDAGR 297


>gi|195484367|ref|XP_002090664.1| GE12672 [Drosophila yakuba]
 gi|194176765|gb|EDW90376.1| GE12672 [Drosophila yakuba]
          Length = 442

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 168 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 223

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 224 FQNRRAKEKRLKKDAGR 240


>gi|225581041|gb|ACN94618.1| GA10505 [Drosophila miranda]
          Length = 499

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 224 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 279

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 280 FQNRRAKEKRLKKDAGR 296


>gi|171916111|ref|NP_001116445.1| LIM/homeobox protein Lhx4 [Danio rerio]
          Length = 391

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 168 TAKQLETLKSAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 223

Query: 93  R 93
           R
Sbjct: 224 R 224


>gi|255545820|ref|XP_002513970.1| homeobox protein, putative [Ricinus communis]
 gi|223547056|gb|EEF48553.1| homeobox protein, putative [Ricinus communis]
          Length = 268

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 32/206 (15%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R + +QV+ALE+ +    K    R+ +L  E  +    +P+Q+ +WFQNRR R K +
Sbjct: 59  KKRRLSMDQVKALEKNFEVENKLEPERKIRLAEELGL----QPRQVAIWFQNRRARWKTK 114

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE----NGYMKQQLRTAPATTD 141
              +E   L+T    L      L  +N+ L  Q+ +L  +    N    Q ++     ++
Sbjct: 115 QLEREYVTLKTNYEALKLDYNNLERDNESLNLQLKELKAKMREGNAESSQSVKEECPVSE 174

Query: 142 ASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM------------ 189
           +  ++ V +  H   D NN  G     ++ +++    ++ T ++W+Q+            
Sbjct: 175 SENNASVQSQSHEFSDNNNSNGSF---KDNISDL---SSHTLMNWIQLSDSRAILGNGYQ 228

Query: 190 ---PGMKPGPDSVGIFAISQSCSGVA 212
              P +    +   +F I +SC+ ++
Sbjct: 229 VYQPHLVKLEEHHSLFNIEESCNFLS 254


>gi|224134374|ref|XP_002327822.1| predicted protein [Populus trichocarpa]
 gi|222836907|gb|EEE75300.1| predicted protein [Populus trichocarpa]
          Length = 204

 Score = 50.4 bits (119), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 11/119 (9%)

Query: 6   QQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPI 65
           + + +++R+ ++G      +   +  + +AEQV  LE  + +  K  + R+ +L  +   
Sbjct: 29  ESKPRRRRKKNTG----EGVSGARKRKLSAEQVNFLEMNFGDEHKLETERKDKLASDL-- 82

Query: 66  LSNIEPKQIKVWFQNRRCREKQRK---EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQ 121
              ++P+Q+ VWFQNRR R K +K   E ++L+T +  +      L  E  +L++Q+S+
Sbjct: 83  --GLDPRQVAVWFQNRRARWKNKKLEEEYTKLKTAHESIVVQKCQLESEVLKLKEQLSR 139


>gi|432856246|ref|XP_004068425.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oryzias latipes]
          Length = 389

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 166 TAKQLETLKSAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 221

Query: 93  R 93
           R
Sbjct: 222 R 222


>gi|391327822|ref|XP_003738394.1| PREDICTED: LIM/homeobox protein Lhx3-like [Metaseiulus
           occidentalis]
          Length = 408

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 40/57 (70%), Gaps = 4/57 (7%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 90
           TA+Q+E L+  Y++ PKP+   R+QL R+    + ++ + ++VWFQNRR +EK+ K+
Sbjct: 186 TAKQLETLKSAYNQSPKPARHVREQLSRD----TGLDMRVVQVWFQNRRAKEKRLKK 238


>gi|321464128|gb|EFX75138.1| hypothetical protein DAPPUDRAFT_323670 [Daphnia pulex]
          Length = 278

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 7/79 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE--- 90
           TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VWFQNRR +EK+ K+   
Sbjct: 182 TAKQLETLKSAYNASPKPARHVREQLSQD----TGLDMRVVQVWFQNRRAKEKRLKKDAG 237

Query: 91  ASRLQTVNRKLTAMNKLLM 109
            +R +T+NR +   +  L 
Sbjct: 238 RARWETINRSVVIKHDGLF 256


>gi|328708425|ref|XP_001944208.2| PREDICTED: LIM/homeobox protein Lhx3-like [Acyrthosiphon pisum]
          Length = 375

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 5/92 (5%)

Query: 3   MVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRE 62
           +V +   +  +    G ++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++
Sbjct: 153 LVCKPDYEAAKTKEGGCLDGDQPNKRPRTTITAKQLETLKMAYNNSPKPARHVREQLSQD 212

Query: 63  CPILSNIEPKQIKVWFQNRRCREKQ-RKEASR 93
               + ++ + ++VWFQNRR +EK+ +K+A R
Sbjct: 213 ----TGLDMRVVQVWFQNRRAKEKRLKKDAGR 240


>gi|195438224|ref|XP_002067037.1| GK24239 [Drosophila willistoni]
 gi|194163122|gb|EDW78023.1| GK24239 [Drosophila willistoni]
          Length = 448

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 168 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 223

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 224 FQNRRAKEKRLKKDAGR 240


>gi|389741606|gb|EIM82794.1| hypothetical protein STEHIDRAFT_170978 [Stereum hirsutum FP-91666
           SS1]
          Length = 1316

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 4/56 (7%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 87
           R +  Q++ LE V+    KPSS+ R+QL  +      + P++++VWFQNRR +EK+
Sbjct: 78  RTSPPQLQRLESVFVVDKKPSSITRKQLAHDL----KMSPREVQVWFQNRRAKEKK 129


>gi|388493514|gb|AFK34823.1| unknown [Lotus japonicus]
          Length = 147

 Score = 50.4 bits (119), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 88
           R++ EQ+ +LE ++    K    ++ QL ++      ++P+Q+ +WFQNRR R K +   
Sbjct: 41  RFSDEQIRSLECIFESESKLEPRKKIQLAKDL----GLQPRQVAIWFQNRRARWKSKRME 96

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           KE  +L+     L +  + L EE + LQ ++ +L
Sbjct: 97  KEYRKLKDEYDNLASRFESLKEEKESLQLELQKL 130


>gi|195164566|ref|XP_002023117.1| GL21131 [Drosophila persimilis]
 gi|194105202|gb|EDW27245.1| GL21131 [Drosophila persimilis]
          Length = 490

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 224 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 279

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 280 FQNRRAKEKRLKKDAGR 296


>gi|449296679|gb|EMC92698.1| hypothetical protein BAUCODRAFT_27052 [Baudoinia compniacensis UAMH
           10762]
          Length = 593

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 9/97 (9%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T  Q   L   ++  P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 190 KRFRLTHNQTRFLMSEFARQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKLK-- 244

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
               RL T +R+    ++ L    D  Q   S    +
Sbjct: 245 ----RLNTDDRERMLRSRALPVNFDMTQALHSPFTSQ 277


>gi|242081691|ref|XP_002445614.1| hypothetical protein SORBIDRAFT_07g022620 [Sorghum bicolor]
 gi|241941964|gb|EES15109.1| hypothetical protein SORBIDRAFT_07g022620 [Sorghum bicolor]
          Length = 377

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 20/146 (13%)

Query: 13  RESSSGSINKHQLDNGKYVRYTAEQVEALERVYSE----CPKPSSLRRQQLIRECPILSN 68
           R SS  S         K +R + EQ   LE  + E     PK  +   +QL        N
Sbjct: 176 RSSSRASDEDDGASARKKLRLSKEQSAFLEESFKEHSTLNPKQKAALAKQL--------N 227

Query: 69  IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGY 128
           + P+Q++VWFQNRR R K ++     + + R      + L EEN RL K++++L      
Sbjct: 228 LRPRQVEVWFQNRRARTKLKQTEVDCEYLKR----CCETLTEENRRLHKELAELRALKAA 283

Query: 129 MKQQLRTAPATTDA---SCDSVVTTP 151
               +R  PATT +   SC+ V + P
Sbjct: 284 PPFFMRL-PATTLSMCPSCERVASGP 308


>gi|2149584|gb|AAC53336.1| LIM-homeobox protein [Mus musculus]
          Length = 190

 Score = 50.4 bits (119), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 4/57 (7%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 90
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ K+
Sbjct: 136 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKK 188


>gi|356523040|ref|XP_003530150.1| PREDICTED: homeobox-leucine zipper protein HAT3-like [Glycine max]
          Length = 308

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 8/118 (6%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K +R + EQ   LE  + E    +  ++Q L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 146 KKLRLSKEQALVLEETFKEHNTLNPKQKQALAKQL----NLMPRQVEVWFQNRRARTKLK 201

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDS 146
           +     + + R        L EEN RLQK+V +L          ++  P TT   C S
Sbjct: 202 QTEVDCEYLKRCCEN----LTEENRRLQKEVQELRALKLSPHLYMQMNPPTTLTMCPS 255


>gi|356572472|ref|XP_003554392.1| PREDICTED: homeobox-leucine zipper protein HAT7-like [Glycine max]
          Length = 292

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 8/109 (7%)

Query: 24  QLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 83
           QL   K  R + EQV+ALE+ +    K    R+ QL +       ++P+QI +WFQNRR 
Sbjct: 83  QLLGEKKKRLSLEQVKALEKSFELGNKLEPERKMQLAKAL----GLQPRQIAIWFQNRRA 138

Query: 84  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
           R K ++     + + ++  A+      +ND L+ Q  +L  E   +K++
Sbjct: 139 RWKTKQLEKEYEVLKKQFEAVKA----DNDSLKSQNQKLHTELQTLKRR 183


>gi|293339636|gb|ADE44110.1| tailup [Megaselia abdita]
          Length = 348

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 177 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 232

Query: 96  TVNRK 100
               K
Sbjct: 233 MQQEK 237


>gi|121714349|ref|XP_001274785.1| homeobox transcription factor, putative [Aspergillus clavatus NRRL
           1]
 gi|119402939|gb|EAW13359.1| homeobox transcription factor, putative [Aspergillus clavatus NRRL
           1]
          Length = 573

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 25/126 (19%)

Query: 7   QQQQQQRESSSGSINKHQLDNG----------------KYVRYTAEQVEALERVYSECPK 50
           Q++ Q  E  +G I  H  D G                K  R T  Q   L   ++    
Sbjct: 151 QEESQGDEQENGDIMTHSSDEGGDQKHSSDAKNDKKKMKRFRLTHNQTRFLMSEFTRQAH 210

Query: 51  PSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLME 110
           P +  R++L RE P L+   P+Q++VWFQNRR + K      RL + +R+    ++ L +
Sbjct: 211 PDAAHRERLSREIPGLT---PRQVQVWFQNRRAKLK------RLTSNDRERMLKSRALPD 261

Query: 111 ENDRLQ 116
           + D  Q
Sbjct: 262 DFDTTQ 267


>gi|386769869|ref|NP_001246087.1| Lim3, isoform E [Drosophila melanogaster]
 gi|383291572|gb|AFH03761.1| Lim3, isoform E [Drosophila melanogaster]
          Length = 405

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 133 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 188

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 189 FQNRRAKEKRLKKDAGR 205


>gi|255588212|ref|XP_002534537.1| Homeobox-leucine zipper protein HAT14, putative [Ricinus communis]
 gi|223525092|gb|EEF27847.1| Homeobox-leucine zipper protein HAT14, putative [Ricinus communis]
          Length = 368

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 17/139 (12%)

Query: 12  QRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEP 71
           +R SS  S +       K +R + EQ   LE  + E    +  ++  L ++     N+ P
Sbjct: 169 ERGSSRASDDDENGLTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQL----NLRP 224

Query: 72  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL----VCENG 127
           +Q++VWFQNRR R K ++     + + R      ++L EEN RLQK++ +L      +  
Sbjct: 225 RQVEVWFQNRRARTKLKQTEVDCEYLKR----CCEMLTEENRRLQKELQELRALKTSQPF 280

Query: 128 YMKQQLRTAPATTDASCDS 146
           YM+      PATT   C S
Sbjct: 281 YMQ-----LPATTLTMCPS 294


>gi|225430830|ref|XP_002273007.1| PREDICTED: homeobox-leucine zipper protein ATHB-40 [Vitis vinifera]
 gi|297735199|emb|CBI17561.3| unnamed protein product [Vitis vinifera]
          Length = 211

 Score = 50.1 bits (118), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 15/110 (13%)

Query: 14  ESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
           ESSSG   K +L        + EQV  LE  +    K  S R+ ++  E      ++P+Q
Sbjct: 46  ESSSGCARKRKL--------SEEQVTHLELNFGNEHKLESERKDKIASEL----GLDPRQ 93

Query: 74  IKVWFQNRRCREKQRK---EASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           + VWFQNRR R K +K   E S+L+ V+  +      L  E   L++Q+S
Sbjct: 94  VAVWFQNRRARWKSKKLEEEFSKLKIVHESVVVEKCRLETEVLTLKEQLS 143


>gi|224119128|ref|XP_002317992.1| predicted protein [Populus trichocarpa]
 gi|222858665|gb|EEE96212.1| predicted protein [Populus trichocarpa]
          Length = 268

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T +QV+ LER +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 40  KKRRLTVDQVQFLERSFEVENKLEPERKIQLAKDL----GLQPRQVAIWFQNRRARWKTK 95

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
              K+   LQ+    L A    L +E ++L+ +V+ L  E
Sbjct: 96  QLEKDYEVLQSSYNGLKADYDNLFKEKEKLKAEVNLLTNE 135


>gi|220702719|gb|ACL81158.1| homeobox leucine zipper protein [Mirabilis jalapa]
          Length = 248

 Score = 50.1 bits (118), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 88
           R++ EQV +LE +++   K    ++ Q+ +E      ++P+Q+ +WFQN+R R K +   
Sbjct: 59  RFSDEQVRSLETIFATETKLEPKKKVQVAKEL----GLQPRQVAIWFQNKRARWKSKQIE 114

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           K    L+T    L    + + EE + L KQ+ +L
Sbjct: 115 KNYRVLKTNYDSLKVKFETMKEEKESLLKQLQEL 148


>gi|348504454|ref|XP_003439776.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oreochromis niloticus]
          Length = 387

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 166 TAKQLETLKSAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 221

Query: 93  R 93
           R
Sbjct: 222 R 222


>gi|326923371|ref|XP_003207910.1| PREDICTED: LIM/homeobox protein Lhx3-like [Meleagris gallopavo]
          Length = 399

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y+  PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 166 TAKQLETLKNAYNNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 221

Query: 93  R 93
           R
Sbjct: 222 R 222


>gi|195115252|ref|XP_002002178.1| GI17237 [Drosophila mojavensis]
 gi|193912753|gb|EDW11620.1| GI17237 [Drosophila mojavensis]
          Length = 449

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS++  Q +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VW
Sbjct: 168 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 223

Query: 78  FQNRRCREKQ-RKEASR 93
           FQNRR +EK+ +K+A R
Sbjct: 224 FQNRRAKEKRLKKDAGR 240


>gi|140052423|gb|ABE80119.2| Homeodomain-related [Medicago truncatula]
          Length = 142

 Score = 50.1 bits (118), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 8/91 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T+EQ+E+LE  + E  K    R+ +L +E      ++P+QI +WFQNRR R K +
Sbjct: 59  KKKRLTSEQMESLESSFQEEIKLDPQRKMKLSKEL----GLQPRQIAIWFQNRRARWKTK 114

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQV 119
           +    L+ +   L    +++ +E  +LQ +V
Sbjct: 115 Q----LEHLYDSLRHQFEVVSKEKQQLQDEV 141


>gi|357477401|ref|XP_003608986.1| Homeobox-leucine zipper protein ATHB-6 [Medicago truncatula]
 gi|217073494|gb|ACJ85107.1| unknown [Medicago truncatula]
 gi|355510041|gb|AES91183.1| Homeobox-leucine zipper protein ATHB-6 [Medicago truncatula]
 gi|388499834|gb|AFK37983.1| unknown [Medicago truncatula]
          Length = 337

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 7/98 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R + +QV+ LE+ + E  K    R+ +L ++      ++P+Q+ +WFQNRR R K +
Sbjct: 95  KKRRLSVDQVQFLEKSFEEDNKLEPERKTKLAKDL----GLQPRQVAIWFQNRRARWKTK 150

Query: 89  KEASRLQTVN---RKLTAMNKLLMEENDRLQKQVSQLV 123
           +      ++N     L      L++E DRLQ +V+ L 
Sbjct: 151 QLEKDYDSLNDGYESLKTEYDNLLKEKDRLQSEVASLT 188


>gi|148283395|gb|ABQ57278.1| hox16, partial [Oryza sativa Indica Group]
          Length = 175

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 14/100 (14%)

Query: 55  RRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR---KEASRLQTVNRKLTAMNKLLMEE 111
           R+ +L R+      ++P+Q+ VWFQNRR R K +   ++  RL+     L A +  L+++
Sbjct: 2   RKTELARKL----GLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQD 57

Query: 112 NDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVVTTP 151
           N RL  QV  L        ++L+    TT+ S  + V  P
Sbjct: 58  NHRLHSQVMSLT-------EKLQEKETTTEGSAGAAVDVP 90


>gi|224096942|ref|XP_002310795.1| predicted protein [Populus trichocarpa]
 gi|222853698|gb|EEE91245.1| predicted protein [Populus trichocarpa]
          Length = 204

 Score = 50.1 bits (118), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 7/121 (5%)

Query: 4   VIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIREC 63
           ++ QQ + +            L   +  +   EQV  LE  +    K  S R+ +L  E 
Sbjct: 23  MVPQQGESKPRRRRKKNKDADLSGARKRKLNEEQVNLLEMNFGNEHKLESERKDKLASEL 82

Query: 64  PILSNIEPKQIKVWFQNRRCREKQRK---EASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
                ++P+Q+ VWFQNRR R K +K   E ++L+T +  +      L  E  +L++Q+S
Sbjct: 83  ----GLDPRQVAVWFQNRRARWKNKKLEEEYTKLKTSHENIVVEKCQLESEVLKLKEQLS 138

Query: 121 Q 121
           +
Sbjct: 139 E 139


>gi|116787512|gb|ABK24536.1| unknown [Picea sitchensis]
          Length = 358

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 8/110 (7%)

Query: 13  RESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPK 72
           R+ S GS  +      K +R + EQ   LE  + E    +  ++  L ++     N+ P+
Sbjct: 182 RDCSRGSDEEEGGGTRKKLRLSKEQSAYLEESFKEHNTLNPKQKLALAKQL----NLRPR 237

Query: 73  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           Q++VWFQNRR R K ++     + + R      + L EEN RLQK + +L
Sbjct: 238 QVEVWFQNRRARTKLKQTEVDCEYLKR----CYETLTEENRRLQKDIQEL 283


>gi|357113670|ref|XP_003558624.1| PREDICTED: homeobox-leucine zipper protein HOX13-like [Brachypodium
           distachyon]
          Length = 315

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 8/107 (7%)

Query: 27  NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 86
            GK  R   EQV ALER +    K    R+ ++ R+  +    +P+Q+ VWFQNRR R K
Sbjct: 52  GGKKRRLALEQVRALERSFEVDNKLDPERKARIARDLAL----QPRQVAVWFQNRRARWK 107

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
            ++    L+     L A +  L  + D L++    L  E   ++++L
Sbjct: 108 TKQ----LERDFNALRARHDALRSDCDALRRDKDALAAEIRELREKL 150


>gi|307209962|gb|EFN86739.1| Insulin gene enhancer protein ISL-1 [Harpegnathos saltator]
          Length = 407

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 4/60 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++  A + Q
Sbjct: 204 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIALKQQ 259


>gi|224130632|ref|XP_002320889.1| predicted protein [Populus trichocarpa]
 gi|222861662|gb|EEE99204.1| predicted protein [Populus trichocarpa]
          Length = 238

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 19/149 (12%)

Query: 33  YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK--- 89
           ++ EQ+++LE ++    +    ++ QL RE      ++P+Q+ +WFQN+R R K ++   
Sbjct: 35  FSDEQIKSLETMFESETRLEPRKKMQLAREL----GLQPRQVAIWFQNKRARWKSKQLER 90

Query: 90  -----------EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQ-LVCENGYMKQQLRTAP 137
                       ASR +T+ ++  A+   L + ND ++K V +   C  G          
Sbjct: 91  DYSMLRANYNSLASRFETLKKEKQALAIQLQKLNDLMKKPVEEGECCGQGAAVNSSEGES 150

Query: 138 ATTDASCDSVVTTPQHSLRDANNPAGLLS 166
              DA+     T P+ S+    +  G+LS
Sbjct: 151 ENGDATKGESETKPRLSIEQPEHGLGVLS 179


>gi|441636332|ref|XP_003259172.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4 [Nomascus
           leucogenys]
          Length = 415

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 191 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 246

Query: 93  R 93
           R
Sbjct: 247 R 247


>gi|332023208|gb|EGI63464.1| Insulin gene enhancer protein ISL-1 [Acromyrmex echinatior]
          Length = 432

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 4/60 (6%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K++  A + Q
Sbjct: 228 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIAMKQQ 283


>gi|386778765|gb|AFJ23867.1| HB-1 [Malus x domestica]
          Length = 336

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 8/120 (6%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T++QV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 79  KKRRLTSDQVHMLEKSFETENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 134

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
              ++   L++    L +    +++EN +L+ QV  +  + G  K+Q  +  AT  A+ D
Sbjct: 135 QLERDYDLLKSSYDTLLSDYDSILKENQKLKSQVVSINEKLG-GKEQASSTKATAFAADD 193


>gi|148707455|gb|EDL39402.1| LIM homeobox protein 4, isoform CRA_a [Mus musculus]
          Length = 329

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 104 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 159

Query: 93  R 93
           R
Sbjct: 160 R 160


>gi|118488004|gb|ABK95823.1| unknown [Populus trichocarpa]
          Length = 314

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T +QV+ LE+ +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 86  KKRRLTVDQVQFLEKSFELENKLEPERKIQLAKDL----GLQPRQVAIWFQNRRARWKTK 141

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
              K+   LQ+    L A    L++E ++L+ +V+ L 
Sbjct: 142 QLEKDYDVLQSSYNSLKADYDNLLKEKEKLKAEVNLLT 179


>gi|158299816|ref|XP_319836.3| AGAP009088-PA [Anopheles gambiae str. PEST]
 gi|157013700|gb|EAA14726.3| AGAP009088-PA [Anopheles gambiae str. PEST]
          Length = 389

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 5/79 (6%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           S GS++    +       TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++
Sbjct: 166 SDGSLDGESSNKRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQD----TGLDMRVVQ 221

Query: 76  VWFQNRRCREKQ-RKEASR 93
           VWFQNRR +EK+ +K+A R
Sbjct: 222 VWFQNRRAKEKRLKKDAGR 240


>gi|125605524|gb|EAZ44560.1| hypothetical protein OsJ_29180 [Oryza sativa Japonica Group]
          Length = 183

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 8/93 (8%)

Query: 32  RYTAEQVEALERVYSECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK- 89
           R TAEQV ALER + E   K    R+ +L R       I P+Q+ VWFQNRR R K ++ 
Sbjct: 85  RLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWKTKQL 140

Query: 90  --EASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
             +  RL+  + +L A    L  +N+ L+ Q S
Sbjct: 141 ELDFDRLRAAHDELLAGRTALAADNESLRSQNS 173


>gi|18858909|ref|NP_571039.1| insulin gene enhancer protein isl-2b [Danio rerio]
 gi|1708564|sp|P53407.1|ISL2B_DANRE RecName: Full=Insulin gene enhancer protein isl-2b; Short=Islet-2B;
           AltName: Full=Insulin gene enhancer protein isl-3;
           Short=Islet-3
 gi|1037168|dbj|BAA07485.1| zfIsl-3 [Danio rerio]
 gi|55962547|emb|CAI11499.1| islet 3 [Danio rerio]
 gi|63100507|gb|AAH95011.1| Islet2b [Danio rerio]
          Length = 358

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 36/53 (67%), Gaps = 4/53 (7%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 201 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 249


>gi|350537501|ref|NP_001234296.1| homeodomain leucine zipper protein [Solanum lycopersicum]
 gi|211853240|emb|CAP16664.1| homeodomain leucine zipper protein [Solanum lycopersicum]
          Length = 285

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 66  KKRRLTPEQVHLLEKSFETENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 121

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
              ++  +L++    L +    + ++ND+L+ +V  L+
Sbjct: 122 QLERDYDQLKSSYDSLLSDFDSVRKDNDKLKSEVVSLM 159


>gi|359497258|ref|XP_002271511.2| PREDICTED: homeobox-leucine zipper protein HAT22 [Vitis vinifera]
 gi|147778182|emb|CAN60988.1| hypothetical protein VITISV_022980 [Vitis vinifera]
          Length = 283

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 15/141 (10%)

Query: 12  QRESSSGSINKHQLDNG-KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           +R SS  S       NG K +R T EQ   LE  + +    +  ++Q L ++     N+ 
Sbjct: 122 ERLSSRVSDEDEDGSNGRKKLRLTKEQSALLEESFKQHSTLNPKQKQALAKQL----NLR 177

Query: 71  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL----VCEN 126
           P+Q++VWFQNRR R K ++     + + +   +    L +EN RLQK++ +L    + + 
Sbjct: 178 PRQVEVWFQNRRARTKLKQTEVDCEFLKKCCES----LTDENRRLQKELQELKALKLAQP 233

Query: 127 GYMKQQLRTAPATTDASCDSV 147
            YM  QL  A  T   SC+ +
Sbjct: 234 LYM--QLPAATLTMCPSCERI 252


>gi|1708557|sp|P53408.1|ISL2A_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2A; Short=Islet-2A
          Length = 358

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 36/53 (67%), Gaps = 4/53 (7%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 200 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 248


>gi|3868847|dbj|BAA34244.1| CRHB10 [Ceratopteris richardii]
          Length = 214

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 16/112 (14%)

Query: 15  SSSGSINKHQLDNGKYVRYTAEQVEALERVYSE----CPKPSSLRRQQLIRECPILSNIE 70
           SS  S  +      K +R T EQ   LE  + E     PK  S   +QL        N  
Sbjct: 46  SSRASDEEDGASTRKKLRLTKEQSAFLEESFKEHSTFNPKQKSALAKQL--------NFR 97

Query: 71  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK+V +L
Sbjct: 98  PRQVEVWFQNRRARTKLKQTEVDCELLKRCCES----LTEENRRLQKEVQEL 145


>gi|47225657|emb|CAG08000.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 363

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 140 TAKQLETLKSAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 195

Query: 93  R 93
           R
Sbjct: 196 R 196


>gi|357141086|ref|XP_003572077.1| PREDICTED: homeobox-leucine zipper protein HOX1-like [Brachypodium
           distachyon]
          Length = 272

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 8/120 (6%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K +R + +Q   LE  +++    +  ++  L R+      + P+Q++VWFQNRR R K +
Sbjct: 125 KKLRLSKDQSAVLEDSFNQHSTLNPKQKAALARQL----GLRPRQVEVWFQNRRARTKLK 180

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
           +     + + R+  A    L EEN RL ++V  L     + +  +R  P T   SC+ V 
Sbjct: 181 QTEVDCEALRRRCDA----LTEENRRLLREVQALKLPLPHPQLYMRAPPLTMCPSCERVA 236


>gi|354475897|ref|XP_003500163.1| PREDICTED: LIM/homeobox protein Lhx4 [Cricetulus griseus]
          Length = 390

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 165 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 220

Query: 93  R 93
           R
Sbjct: 221 R 221


>gi|326475795|gb|EGD99804.1| hypothetical protein TESG_07141 [Trichophyton tonsurans CBS 112818]
          Length = 566

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 13/125 (10%)

Query: 5   IQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           IQ    + + +    I++ ++   K  R T  Q   L   ++    P +  R++L RE P
Sbjct: 147 IQDADDEPKPTGGEKIDRKKM---KRFRLTHNQTRYLMSEFTRQAHPDAAHRERLSREIP 203

Query: 65  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            LS   P+Q++VWFQNRR + K      RL   +R+    ++ L ++ D  Q   S    
Sbjct: 204 GLS---PRQVQVWFQNRRAKLK------RLSLDDRERVLKSRALPDDFDMAQSLQSSYAT 254

Query: 125 E-NGY 128
           E +GY
Sbjct: 255 EHHGY 259


>gi|255571291|ref|XP_002526595.1| Homeobox protein GLABRA2, putative [Ricinus communis]
 gi|223534089|gb|EEF35807.1| Homeobox protein GLABRA2, putative [Ricinus communis]
          Length = 546

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 26/193 (13%)

Query: 211 VAARACGLVS--LEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN-AGTIELLYTQAYAP 267
           VA  A  LV   L+P K  ++    P+       ++V      GN +G+++L+Y Q +  
Sbjct: 117 VAINALNLVEIFLDPNKWVDLF---PTIVTKASIIQVLETGMLGNRSGSLQLMYEQMHIL 173

Query: 268 TTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPC 327
           + L P R+F+ LR+   ++  + V+ + S                 R+  LPSGC+I   
Sbjct: 174 SPLVPPREFYFLRHCQQIEGATWVIADVSYDCL------KETILSSRSWKLPSGCMIEEL 227

Query: 328 DGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPAVLRT 387
             G S +  ++H+ ++               K    R+      G   YG  R  A L+ 
Sbjct: 228 PNGFSKVTWIEHVEVD--------------DKTQTHRLYRDLICGSSAYGAERWIAALQR 273

Query: 388 FSQRLSRGFNDAV 400
             +RL+  F + +
Sbjct: 274 VCERLAFSFRETL 286


>gi|431915961|gb|ELK16215.1| LIM/homeobox protein Lhx4 [Pteropus alecto]
          Length = 329

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 104 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 159

Query: 93  R 93
           R
Sbjct: 160 R 160


>gi|9759299|dbj|BAB09805.1| unnamed protein product [Arabidopsis thaliana]
          Length = 225

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 17/146 (11%)

Query: 12  QRESSSGSINKHQLDNG---KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSN 68
           +R +S  S   +  +NG   K +R + +Q   LE  + E    S+L  +Q I     L N
Sbjct: 59  ERSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKE---HSTLNPKQKIALAKQL-N 114

Query: 69  IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL----VC 124
           + P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK+V +L      
Sbjct: 115 LRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTLKTS 170

Query: 125 ENGYMKQQLRTAPATTDASCDSVVTT 150
              YM  QL     T   SC+ V T+
Sbjct: 171 TPFYM--QLPATTLTMCPSCERVATS 194


>gi|302398833|gb|ADL36711.1| HD domain class transcription factor [Malus x domestica]
          Length = 286

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 81  KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 136

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQL 122
           +       + R+  A+   N  L  +N +LQ ++  L
Sbjct: 137 QLEKDYDLLKRQFDAIKADNDALQSQNQKLQAEIMAL 173


>gi|300837159|gb|ADK38611.1| LIM homeodomain protein 3 isoform M2-LHX3 [Canis lupus
          familiaris]
          Length = 265

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 5/61 (8%)

Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
          TA+Q+E L+  Y+  PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 32 TAKQLETLKSAYNTSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 87

Query: 93 R 93
          R
Sbjct: 88 R 88


>gi|157820803|ref|NP_001101818.1| LIM/homeobox protein Lhx4 [Rattus norvegicus]
 gi|149058350|gb|EDM09507.1| LIM homeobox protein 4 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 329

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 104 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 159

Query: 93  R 93
           R
Sbjct: 160 R 160


>gi|301611522|ref|XP_002935283.1| PREDICTED: LIM/homeobox protein Lhx3-like [Xenopus (Silurana)
           tropicalis]
          Length = 362

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y+  PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 129 TAKQLETLKNAYNNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 184

Query: 93  R 93
           R
Sbjct: 185 R 185


>gi|242794178|ref|XP_002482319.1| homeobox transcription factor, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|242794183|ref|XP_002482320.1| homeobox transcription factor, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218718907|gb|EED18327.1| homeobox transcription factor, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218718908|gb|EED18328.1| homeobox transcription factor, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 566

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T  Q   L   ++    P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 188 KRFRLTHNQTRFLMSEFTRQAHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKLK-- 242

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQ 116
               RL + +R     ++ L +  DR Q
Sbjct: 243 ----RLTSQDRDRVLKSRALPDHFDRTQ 266


>gi|410921498|ref|XP_003974220.1| PREDICTED: LIM/homeobox protein Lhx4-like [Takifugu rubripes]
          Length = 389

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 166 TAKQLETLKSAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 221

Query: 93  R 93
           R
Sbjct: 222 R 222


>gi|3868833|dbj|BAA34237.1| CRHB3 [Ceratopteris richardii]
          Length = 212

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           S GS  +      K +R + EQ   LE  + E    +S ++  L ++     N+ P+Q++
Sbjct: 45  SRGSDEEEGNSTRKKLRLSKEQSALLEESFKEYNTLNSKQKSALAKQL----NLRPRQVE 100

Query: 76  VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           VWFQNRR R K ++     + + R   +    L EEN RLQK+V +L
Sbjct: 101 VWFQNRRARTKLKQTEVDCELLKRCCES----LTEENRRLQKEVQEL 143


>gi|242011200|ref|XP_002426343.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
 gi|212510420|gb|EEB13605.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
          Length = 366

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 5/63 (7%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y+  PKP+   R+QL ++    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 163 TAKQLETLKSAYNNSPKPARHVREQLSQD----TGLDMRVVQVWFQNRRAKEKRLKKDAG 218

Query: 93  RLQ 95
           R +
Sbjct: 219 RTK 221


>gi|296090659|emb|CBI41059.3| unnamed protein product [Vitis vinifera]
          Length = 266

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 15/141 (10%)

Query: 12  QRESSSGSINKHQLDNG-KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           +R SS  S       NG K +R T EQ   LE  + +    +  ++Q L ++     N+ 
Sbjct: 105 ERLSSRVSDEDEDGSNGRKKLRLTKEQSALLEESFKQHSTLNPKQKQALAKQL----NLR 160

Query: 71  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL----VCEN 126
           P+Q++VWFQNRR R K ++     + + +   +    L +EN RLQK++ +L    + + 
Sbjct: 161 PRQVEVWFQNRRARTKLKQTEVDCEFLKKCCES----LTDENRRLQKELQELKALKLAQP 216

Query: 127 GYMKQQLRTAPATTDASCDSV 147
            YM  QL  A  T   SC+ +
Sbjct: 217 LYM--QLPAATLTMCPSCERI 235


>gi|449451407|ref|XP_004143453.1| PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cucumis
           sativus]
 gi|449533808|ref|XP_004173863.1| PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cucumis
           sativus]
          Length = 324

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 7/108 (6%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GSI +H     K  R + +QV+ALE+ +    K    R+ +L +E      ++P+Q+ VW
Sbjct: 46  GSIEEHCHVGEKKRRLSVDQVKALEKTFEIENKLEPERKVKLAQEL----GLQPRQVAVW 101

Query: 78  FQNRRCREKQR---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
           FQNRR R K +   ++   L+     L      L ++ND L K++ +L
Sbjct: 102 FQNRRARWKTKQLERDYGLLKANYESLKRSFDTLQQDNDALLKEIKEL 149


>gi|449269080|gb|EMC79889.1| LIM/homeobox protein Lhx3, partial [Columba livia]
          Length = 342

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y+  PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 109 TAKQLETLKNAYNNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 164

Query: 93  R 93
           R
Sbjct: 165 R 165


>gi|403266388|ref|XP_003925368.1| PREDICTED: LIM/homeobox protein Lhx4 [Saimiri boliviensis
           boliviensis]
          Length = 390

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 165 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 220

Query: 93  R 93
           R
Sbjct: 221 R 221


>gi|356571260|ref|XP_003553797.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ATHB-7-like [Glycine max]
          Length = 209

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 16/145 (11%)

Query: 32  RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 88
           R   EQ+++LE ++    +    ++ QL RE      ++P+Q+ +WFQN+R R K +   
Sbjct: 8   RLNDEQIKSLESIFEADARLEPTKKLQLAREL----GLQPRQVAIWFQNKRARWKSKRLQ 63

Query: 89  KEASRLQTVNRKLTAMNK-------LLMEENDRLQKQVSQL-VCENGYMKQQLRTAPATT 140
           ++ + L+     L A+NK        L E +DR+QK + Q   C  GY K    T   TT
Sbjct: 64  RDYTILRASYNNLXALNKEHQSLPTQLQELDDRIQKPLEQAQSCTTGY-KAANSTESETT 122

Query: 141 DASCDSVVTTPQHSLRDANNPAGLL 165
               +  V     S+  + +  G+L
Sbjct: 123 TMKSEQEVKQSNTSIERSQHIVGVL 147


>gi|334321803|ref|XP_001374523.2| PREDICTED: LIM/homeobox protein Lhx4-like [Monodelphis domestica]
          Length = 391

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 166 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 221

Query: 93  R 93
           R
Sbjct: 222 R 222


>gi|209171589|gb|ACI42915.1| tendril-less [Vicia narbonensis]
          Length = 237

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 23/123 (18%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR 93
           T+ QV+ALER + E  K    R+ +L  E      ++P+Q+ VWFQNRR R K       
Sbjct: 78  TSNQVDALERSFHEEIKLDPERKMKLSAEL----GLQPRQVAVWFQNRRTRWK------- 126

Query: 94  LQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR-TAPATTDASCDSVVTTPQ 152
                ++L     +L +EN +LQ +V +L       K++L+  A   T    D  V +P 
Sbjct: 127 ----TKQLEQSYDVLKQENQKLQDEVMEL-------KEKLKEKADCRTQTFGDETVESPL 175

Query: 153 HSL 155
             L
Sbjct: 176 EGL 178


>gi|426332930|ref|XP_004028045.1| PREDICTED: LIM/homeobox protein Lhx4 [Gorilla gorilla gorilla]
          Length = 390

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 165 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 220

Query: 93  R 93
           R
Sbjct: 221 R 221


>gi|29028870|gb|AAO64814.1| At5g06710 [Arabidopsis thaliana]
          Length = 336

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 17/146 (11%)

Query: 12  QRESSSGSINKHQLDNG---KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSN 68
           +R +S  S   +  +NG   K +R + +Q   L+  + E    S+L  +Q I     L N
Sbjct: 170 ERSASRASNEDNDDENGSTRKKLRLSKDQSAFLKDSFKE---HSTLNPKQKIALAKQL-N 225

Query: 69  IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL----VC 124
           + P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK+V +L      
Sbjct: 226 LRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTLKTS 281

Query: 125 ENGYMKQQLRTAPATTDASCDSVVTT 150
              YM  QL     T   SC+ V T+
Sbjct: 282 TPFYM--QLPATTLTMCPSCERVATS 305


>gi|391340116|ref|XP_003744391.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Metaseiulus
           occidentalis]
          Length = 460

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 36/53 (67%), Gaps = 4/53 (7%)

Query: 36  EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Q+  L   Y+  P+P +L ++QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 284 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 332


>gi|388491340|gb|AFK33736.1| unknown [Lotus japonicus]
          Length = 279

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 14/119 (11%)

Query: 10  QQQRESSSGSINKHQLDNG------KYVRYTAEQVEALERVYSECPKPSSLRRQQLIREC 63
           +++R+  S  ++  ++D        K +R T EQ   LE  + +    +  ++Q L R+ 
Sbjct: 110 KRERDHGSEEVDTAEIDEDGATAARKKLRLTKEQSAMLEESFKQHSTLNPKQKQALARQL 169

Query: 64  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
               N+ P+Q++VWFQNRR R K ++       + +      + L +EN RLQK++ +L
Sbjct: 170 ----NLRPRQVEVWFQNRRARTKLKQTEVDCDFLKK----CCETLTDENMRLQKELQEL 220


>gi|302398841|gb|ADL36715.1| HD domain class transcription factor [Malus x domestica]
          Length = 289

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 81  KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 136

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQL 122
           +       + R+  A+   N  L  +N +LQ ++  L
Sbjct: 137 QLEKDYDLLKRQFDAIKADNDALQSQNQKLQAEIMAL 173


>gi|301770851|ref|XP_002920842.1| PREDICTED: LIM/homeobox protein Lhx4-like [Ailuropoda melanoleuca]
          Length = 390

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 165 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 220

Query: 93  R 93
           R
Sbjct: 221 R 221


>gi|297662584|ref|XP_002809779.1| PREDICTED: LIM/homeobox protein Lhx4 [Pongo abelii]
          Length = 390

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 165 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 220

Query: 93  R 93
           R
Sbjct: 221 R 221


>gi|18026224|gb|AAL07260.1| LIM homeodomain protein [Homo sapiens]
          Length = 390

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 165 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 220

Query: 93  R 93
           R
Sbjct: 221 R 221


>gi|296229653|ref|XP_002760359.1| PREDICTED: LIM/homeobox protein Lhx4 [Callithrix jacchus]
          Length = 390

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)

Query: 34  TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
           TA+Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 165 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 220

Query: 93  R 93
           R
Sbjct: 221 R 221


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.132    0.391 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,614,739,113
Number of Sequences: 23463169
Number of extensions: 492039717
Number of successful extensions: 1494648
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 4891
Number of HSP's that attempted gapping in prelim test: 1487299
Number of HSP's gapped (non-prelim): 7080
length of query: 745
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 595
effective length of database: 8,839,720,017
effective search space: 5259633410115
effective search space used: 5259633410115
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)