BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004544
         (745 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9SE43|REV_ARATH Homeobox-leucine zipper protein REVOLUTA OS=Arabidopsis thaliana
           GN=REV PE=1 SV=2
          Length = 842

 Score = 1264 bits (3271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/738 (83%), Positives = 670/738 (90%), Gaps = 17/738 (2%)

Query: 12  QRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEP 71
            RE SS S+N+H   +GKYVRYTAEQVEALERVY+ECPKPSSLRRQQLIREC IL+NIEP
Sbjct: 8   HRERSSDSMNRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEP 67

Query: 72  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ 131
           KQIKVWFQNRRCR+KQRKEASRLQ+VNRKL+AMNKLLMEENDRLQKQVSQLVCENGYMKQ
Sbjct: 68  KQIKVWFQNRRCRDKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCENGYMKQ 127

Query: 132 QLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 191
           QL T     D SC+SVVTTPQHSLRDAN+PAGLLSIAEETLAEFLSKATGTAVDWVQMPG
Sbjct: 128 QLTTV--VNDPSCESVVTTPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPG 185

Query: 192 MKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPA 251
           MKPGPDSVGIFAISQ C+GVAARACGLVSLEP KIAEILKDRPSWFRDCRSLEVFTMFPA
Sbjct: 186 MKPGPDSVGIFAISQRCNGVAARACGLVSLEPMKIAEILKDRPSWFRDCRSLEVFTMFPA 245

Query: 252 GNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQ 311
           GN GTIEL+Y Q YAPTTLAPARDFWTLRYTT+LDNGS VVCERSLSGSGAGPN ASA+Q
Sbjct: 246 GNGGTIELVYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQ 305

Query: 312 FVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA--- 368
           FVRAEML SG LIRPCDGGGSIIHIVDHLNLEAWSVP+VLRPLYESSKVVAQ+MTI+   
Sbjct: 306 FVRAEMLSSGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALR 365

Query: 369 -------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVII 421
                  E++GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGF DDGWS M CDGAED+I+
Sbjct: 366 YIRQLAQESNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIV 425

Query: 422 AVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           A+NSTK L   +N +NSL+FLGG+LCAKASMLLQNVPPA+L+RFLREHRSEWADFNVDAY
Sbjct: 426 AINSTKHL---NNISNSLSFLGGVLCAKASMLLQNVPPAVLIRFLREHRSEWADFNVDAY 482

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
           SAA+LKAGS+AYPGMRPTRFTGSQIIMPLGHTIEHEE+LEV+RLEGHSLAQEDAF+SRD+
Sbjct: 483 SAATLKAGSFAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDV 542

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA-H 600
           HLLQIC+G+DENAVGACSEL+FAPI+EMFPDD PL+PSGFR+IP+D+KT D  D LTA H
Sbjct: 543 HLLQICTGIDENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANH 602

Query: 601 RTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVI 660
           RTLDLTSSLEVGP+   A+G+S S   +R +LTIAFQFPFE+NLQ+NVA MA QYVRSVI
Sbjct: 603 RTLDLTSSLEVGPSPENASGNSFSSSSSRCILTIAFQFPFENNLQENVAGMACQYVRSVI 662

Query: 661 SSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGG-DS 719
           SSVQRVAMAI PSG+SP+LG KLSPGSPEA+TLA WI QSYS+HLG+ELL  DS+G  DS
Sbjct: 663 SSVQRVAMAISPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSELLTIDSLGSDDS 722

Query: 720 VLKNLWQHSDAILCCSLK 737
           VLK LW H DAILCCSLK
Sbjct: 723 VLKLLWDHQDAILCCSLK 740


>sp|A2Z8L4|HOX9_ORYSI Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. indica
           GN=HOX9 PE=2 SV=2
          Length = 840

 Score = 1086 bits (2809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/747 (71%), Positives = 613/747 (82%), Gaps = 15/747 (2%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MA  +  +     +   G  +K  +D+GKYVRYT EQVEALERVY+ECPKPSS RRQQL+
Sbjct: 1   MAAAVAMRSGSGSDGGGGGYDKAGMDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLL 60

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           R+CPIL+NIEPKQIKVWFQNRRCR+KQRKEASRLQ VNRKLTAMNKLLMEEN+RLQKQVS
Sbjct: 61  RDCPILANIEPKQIKVWFQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVS 120

Query: 121 QLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 180
           QLV EN YMKQQL+      D SC+S VTTPQ+ LRDA+NP+GLL+IAEETL EFLSKAT
Sbjct: 121 QLVHENAYMKQQLQNPSLGNDTSCESNVTTPQNPLRDASNPSGLLTIAEETLTEFLSKAT 180

Query: 181 GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDC 240
           GTAVDWV MPGMKPGPDS GI A+S  C GVAARACGLV+LEPTKI EILKDRPSWFRDC
Sbjct: 181 GTAVDWVPMPGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDC 240

Query: 241 RSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS 300
           RSLEVFTMFPAGN GTIEL+Y Q YAPTTL PARDFWTLRYTTT+D+GSLVVCERSLSGS
Sbjct: 241 RSLEVFTMFPAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMDDGSLVVCERSLSGS 300

Query: 301 GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV 360
           G GP+ ASA QFVRAEMLPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+V
Sbjct: 301 GGGPSTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV 360

Query: 361 VAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL 410
           VAQ+MT A          ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+
Sbjct: 361 VAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSV 420

Query: 411 MTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHR 470
           M  DG EDVIIA N+ K  +T+++  N+    GG++CAKASMLLQ+VPPA+LVRFLREHR
Sbjct: 421 MGGDGIEDVIIACNAKKVRNTSTS-ANAFVTPGGVICAKASMLLQSVPPAVLVRFLREHR 479

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 530
           SEWAD+N DAYSA+SLK  S + PG+RP RF+GSQIIMPL HT+E+EE+LEV+RLEG +L
Sbjct: 480 SEWADYNFDAYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQAL 539

Query: 531 AQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
             +D  +SRDIHLLQ+C+G+DE ++G+C +LVFAPIDE+FPDD PL+ SGFR+IPLD KT
Sbjct: 540 THDDGLMSRDIHLLQLCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKT 599

Query: 591 PDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
             TP    A RTLDL SSLEVG    P    S    + RSVLTIAFQFP+E +LQD+VAT
Sbjct: 600 DGTP----AGRTLDLASSLEVGSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVAT 655

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELL 710
           MARQYVRS++SSVQRV+MAI PS      G K+  G PEA TLA WICQSY +HLG ELL
Sbjct: 656 MARQYVRSIVSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELL 715

Query: 711 RSDSVGGDSVLKNLWQHSDAILCCSLK 737
           R     G+++LK LW + DAILCCS K
Sbjct: 716 RQADDAGEALLKMLWDYEDAILCCSFK 742


>sp|Q9AV49|HOX9_ORYSJ Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp.
           japonica GN=HOX9 PE=2 SV=1
          Length = 840

 Score = 1080 bits (2794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/747 (71%), Positives = 612/747 (81%), Gaps = 15/747 (2%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MA  +  +     +   G  +K  +D+GKYVRYT EQVEALERVY+ECPKPSS RRQQL+
Sbjct: 1   MAAAVAMRSGSGSDGGGGGYDKAGMDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLL 60

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           R+CPIL+NIEPKQIKVWFQNRRCR+KQRKEASRLQ VNRKLTAMNKLLMEEN+RLQKQVS
Sbjct: 61  RDCPILANIEPKQIKVWFQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVS 120

Query: 121 QLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT 180
           QLV EN YMKQQL+      D SC+S VTTPQ+ LRDA+NP+GLL+IAEETL EFLSKAT
Sbjct: 121 QLVHENAYMKQQLQNPSLGNDTSCESNVTTPQNPLRDASNPSGLLTIAEETLTEFLSKAT 180

Query: 181 GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDC 240
           GTAVDWV MPGMKPGPDS GI A+S  C GVAARACGLV+LEPTKI EILKDRPSWFRDC
Sbjct: 181 GTAVDWVPMPGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDC 240

Query: 241 RSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS 300
           RSLEVFTMFPAGN GTIEL+Y Q YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGS
Sbjct: 241 RSLEVFTMFPAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGS 300

Query: 301 GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV 360
           G GP+ ASA QFVRAEMLPSG L+RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+V
Sbjct: 301 GGGPSTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV 360

Query: 361 VAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL 410
           VAQ+MT A          ETSGEVVY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+
Sbjct: 361 VAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSV 420

Query: 411 MTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHR 470
           M  DG EDVIIA N+ K  +T+++  N+    GG++CAKASMLLQ+VPPA+LVRFLREHR
Sbjct: 421 MGGDGIEDVIIACNAKKVRNTSTS-ANAFVTPGGVICAKASMLLQSVPPAVLVRFLREHR 479

Query: 471 SEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSL 530
           SEWAD+N DAYSA+SLK  S + PG+RP RF+GSQIIMPL HT+E+EE+LEV+RLEG +L
Sbjct: 480 SEWADYNFDAYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQAL 539

Query: 531 AQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKT 590
             +D  +SRDIHLLQ+C+G+DE ++G+C +LV APIDE+FPDD PL+ SGFR+IPLD KT
Sbjct: 540 THDDGLMSRDIHLLQLCTGIDEKSMGSCFQLVSAPIDELFPDDAPLISSGFRVIPLDMKT 599

Query: 591 PDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVAT 650
             TP    A RTLDL SSLEVG    P    S    + RSVLTIAFQFP+E +LQD+VAT
Sbjct: 600 DGTP----AGRTLDLASSLEVGSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVAT 655

Query: 651 MARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELL 710
           MARQYVRS++SSVQRV+MAI PS      G K+  G PEA TLA WICQSY +HLG ELL
Sbjct: 656 MARQYVRSIVSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELL 715

Query: 711 RSDSVGGDSVLKNLWQHSDAILCCSLK 737
           R     G+++LK LW + DAILCCS K
Sbjct: 716 RQADDAGEALLKMLWDYEDAILCCSFK 742


>sp|Q6AST1|HOX32_ORYSJ Homeobox-leucine zipper protein HOX32 OS=Oryza sativa subsp.
           japonica GN=HOX32 PE=2 SV=1
          Length = 859

 Score = 1069 bits (2765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/757 (70%), Positives = 612/757 (80%), Gaps = 29/757 (3%)

Query: 11  QQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           +Q  SS G     Q+D GKYVRYT EQVEALERVY ECPKPSSLRRQQLIRECPILSNIE
Sbjct: 14  RQDRSSPGGGGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIE 73

Query: 71  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMK 130
           PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS+LV ENGYM+
Sbjct: 74  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMR 133

Query: 131 QQLRT-APATTDASCDSVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKA 179
           QQL   + ATTD SC+SVVT+ QH            RDANNPAGLL+IAEETLAEFLSKA
Sbjct: 134 QQLHNPSVATTDTSCESVVTSGQHHQQQNPAATRPQRDANNPAGLLAIAEETLAEFLSKA 193

Query: 180 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD 239
           TGTAVDWVQM GMKPGPDS+GI A+S +CSGVAARACGLVSLEPTK+AEILKDRPSW+RD
Sbjct: 194 TGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRD 253

Query: 240 CRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG 299
           CR ++V  + P GN GTIEL+Y Q YAPTTLA  RDFW LRYT+ L++GSLV+CERSL+ 
Sbjct: 254 CRCVDVLHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQ 313

Query: 300 SGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 359
           S  GP+  +   FVRAE+LPSG LIRPC+GGGS+IHIVDH++L+AWSVPEVLRPLYES K
Sbjct: 314 STGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPK 373

Query: 360 VVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS 409
           ++AQ+MTIA          E+SGE+ YG GRQPAVLRTFSQRLSRGFNDAVNGF DDGWS
Sbjct: 374 ILAQKMTIAALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWS 433

Query: 410 LMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFL 466
           LM+ DGAEDV IA NS+ +    S+  +S  F    GGILCAKASMLLQNVPPALLVRFL
Sbjct: 434 LMSSDGAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFL 493

Query: 467 REHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLE 526
           REHRSEWAD  VDAYSAA+L+A  YA PG+R   F GSQ+I+PL HT+EHEE LEVIRLE
Sbjct: 494 REHRSEWADPGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLE 553

Query: 527 GHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPL 586
           GHSL  ++  +SRD++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPL
Sbjct: 554 GHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPL 613

Query: 587 DSKTPDTPDTLTAHRTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQ 645
           D KT    D  +A RTLDL S+LEVG   T  A+ D+SS  +TRSVLTIAFQF +E++L+
Sbjct: 614 DGKT----DAPSATRTLDLASTLEVGSGGTTRASSDTSSTCNTRSVLTIAFQFSYENHLR 669

Query: 646 DNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHL 705
           ++VA MARQYVR+V++SVQRVAMAI PS L   +  K  PGSPEA TLA WI +SY +H 
Sbjct: 670 ESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHT 729

Query: 706 GAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
           GA+LLR+DS   DS LK +WQHSD+I+CCSLK    F
Sbjct: 730 GADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKAAPVF 766


>sp|A2XK30|HOX32_ORYSI Homeobox-leucine zipper protein HOX32 OS=Oryza sativa subsp. indica
           GN=HOX32 PE=2 SV=1
          Length = 859

 Score = 1069 bits (2764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/757 (70%), Positives = 612/757 (80%), Gaps = 29/757 (3%)

Query: 11  QQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
           +Q  SS G     Q+D GKYVRYT EQVEALERVY ECPKPSSLRRQQLIRECPILSNIE
Sbjct: 14  RQDRSSPGGGGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIE 73

Query: 71  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMK 130
           PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS+LV ENGYM+
Sbjct: 74  PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMR 133

Query: 131 QQLRT-APATTDASCDSVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKA 179
           QQL   + ATTD SC+SVVT+ QH            RDANNPAGLL+IAEETLAEFLSKA
Sbjct: 134 QQLHNPSVATTDTSCESVVTSGQHHQQQNPAATRPQRDANNPAGLLAIAEETLAEFLSKA 193

Query: 180 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRD 239
           TGTAVDWVQM GMKPGPDS+GI A+S +CSGVAARACGLVSLEPTK+AEILKDRPSW+RD
Sbjct: 194 TGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRD 253

Query: 240 CRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG 299
           CR ++V  + P GN GTIEL+Y Q YAPTTLA  RDFW LRYT+ L++GSLV+CERSL+ 
Sbjct: 254 CRCVDVLHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQ 313

Query: 300 SGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 359
           S  GP+  +   FVRAE+LPSG LIRPC+GGGS+IHIVDH++L+AWSVPEVLRPLYES K
Sbjct: 314 STGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPK 373

Query: 360 VVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS 409
           ++AQ+MTIA          E+SGE+ YG GRQPAVLRTFSQRLSRGFNDAVNGF DDGWS
Sbjct: 374 ILAQKMTIAALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWS 433

Query: 410 LMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFL 466
           LM+ DGAEDV IA NS+ +    S+  +S  F    GGILCAKASMLLQNVPPALLVRFL
Sbjct: 434 LMSSDGAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFL 493

Query: 467 REHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLE 526
           REHRSEWAD  VDAYSAA+L+A  YA PG+R   F GSQ+I+PL HT+EHEE LEVIRLE
Sbjct: 494 REHRSEWADPGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLE 553

Query: 527 GHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPL 586
           GHSL  ++  +SRD++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+IPL
Sbjct: 554 GHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPL 613

Query: 587 DSKTPDTPDTLTAHRTLDLTSSLEVGP-ATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQ 645
           D KT    D  +A RTLDL S+LEVG   T  A+ D+SS  +TRSVLTIAFQF +E++L+
Sbjct: 614 DGKT----DAPSATRTLDLASTLEVGSGGTTRASSDTSSTCNTRSVLTIAFQFSYENHLR 669

Query: 646 DNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHL 705
           ++VA MARQYVR+V++SVQRVAMAI PS L   +  K  PGSPEA TLA WI +SY +H 
Sbjct: 670 ESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHT 729

Query: 706 GAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQF 742
           GA+LLR+DS   DS LK +WQHSD+I+CCSLK    F
Sbjct: 730 GADLLRTDSQSMDSSLKAMWQHSDSIMCCSLKAAPVF 766


>sp|A2XBL9|HOX10_ORYSI Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. indica
           GN=HOX10 PE=2 SV=2
          Length = 839

 Score = 1065 bits (2753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/725 (71%), Positives = 609/725 (84%), Gaps = 18/725 (2%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+GKYVRYT EQVEALERVY++CPKP+S RRQQL+RECPIL+NIEPKQIKVWFQNRRCR
Sbjct: 23  MDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCR 82

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL+  P   D SC
Sbjct: 83  DKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTPLANDTSC 142

Query: 145 DSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAI 204
           +S VTTPQ+ LRDA+NP+GLLSIAEETL EFLSKATGTA+DWVQMPGMKPGPDSVGI AI
Sbjct: 143 ESNVTTPQNPLRDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAI 202

Query: 205 SQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQA 264
           S  C GVAARACGLV+LEPTK+ EILKDRPSWFRDCR+LEVFTM PAGN GT+EL+YTQ 
Sbjct: 203 SHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCRNLEVFTMIPAGNGGTVELVYTQL 262

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
           YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GP+ ASA Q+VRAEMLPSG L+
Sbjct: 263 YAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVRAEMLPSGYLV 322

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEV 374
           RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT A          ETSGEV
Sbjct: 323 RPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEV 382

Query: 375 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
           VY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV+IA NSTK + + SN
Sbjct: 383 VYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDGVEDVVIACNSTKKIRSNSN 442

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYP 494
              +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A++LK  + + P
Sbjct: 443 AGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLASTLKTSACSLP 502

Query: 495 GMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENA 554
           G+RP RF+GSQII+PL HT+E+EE+LEV+RLEG  L  ++A +SRDIHLLQ+C+G+DE +
Sbjct: 503 GLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKS 562

Query: 555 VGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPA 614
           VG+  +LVFAPID+ FPD+ PL+ SGFR+IPLD KT    D  ++ RTLDL SSLEVG A
Sbjct: 563 VGSSFQLVFAPIDD-FPDETPLISSGFRVIPLDMKT----DGASSGRTLDLASSLEVGSA 617

Query: 615 TNPAAGDSSS--CHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICP 672
           T  A+GD+S+  C + RSVLTIAFQFP+E +LQD+VA MARQYVRS++S+VQRV+MAI P
Sbjct: 618 TAQASGDASADDC-NLRSVLTIAFQFPYELHLQDSVAAMARQYVRSIVSAVQRVSMAISP 676

Query: 673 SGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAIL 732
           S      G ++  G PEA TLA W+CQSY YHLG ELL       + +LK LW + DAIL
Sbjct: 677 SQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGDAEQLLKMLWHYQDAIL 736

Query: 733 CCSLK 737
           CCS K
Sbjct: 737 CCSFK 741


>sp|Q6TAQ6|HOX10_ORYSJ Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp.
           japonica GN=HOX10 PE=2 SV=1
          Length = 839

 Score = 1063 bits (2748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/725 (71%), Positives = 608/725 (83%), Gaps = 18/725 (2%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D+GKYVRYT EQVEALERVY++CPKP+S RRQQL+RECPIL+NIEPKQIKVWFQNRRCR
Sbjct: 23  MDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCR 82

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +KQRKE+SRLQ VNRKLTAMNKLLMEEN+RLQKQVSQLV EN +M+QQL+  P   D SC
Sbjct: 83  DKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTPLANDTSC 142

Query: 145 DSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAI 204
           +S VTTPQ+ LRDA+NP+GLLSIAEETL EFLSKATGTA+DWVQMPGMKPGPDSVGI AI
Sbjct: 143 ESNVTTPQNPLRDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAI 202

Query: 205 SQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQA 264
           S  C GVAARACGLV+LEPTK+ EILKDRPSWFRDCR+LEVFTM PAGN GT+EL+YTQ 
Sbjct: 203 SHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCRNLEVFTMIPAGNGGTVELVYTQL 262

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
           YAPTTL PARDFWTLRYTTT+++GSLVVCERSLSGSG GP+ ASA Q+VRAEMLPSG L+
Sbjct: 263 YAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVRAEMLPSGYLV 322

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----------ETSGEV 374
           RPC+GGGSI+HIVDHL+LEAWSVPEVLRPLYESS+VVAQ+MT A          ETSGEV
Sbjct: 323 RPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEV 382

Query: 375 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASN 434
           VY LGRQPAVLRTFSQRLSRGFNDA++GFNDDGWS+M  DG EDV+IA NSTK + + SN
Sbjct: 383 VYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDGVEDVVIACNSTKKIRSNSN 442

Query: 435 PTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYP 494
              +    GGI+CAKASMLLQ+VPPA+LVRFLREHRSEWAD+N+DAY A++LK  + +  
Sbjct: 443 AGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYLASTLKTSACSLT 502

Query: 495 GMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENA 554
           G+RP RF+GSQII+PL HT+E+EE+LEV+RLEG  L  ++A +SRDIHLLQ+C+G+DE +
Sbjct: 503 GLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKS 562

Query: 555 VGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPA 614
           VG+  +LVFAPID+ FPD+ PL+ SGFR+IPLD KT    D  ++ RTLDL SSLEVG A
Sbjct: 563 VGSSFQLVFAPIDD-FPDETPLISSGFRVIPLDMKT----DGASSGRTLDLASSLEVGSA 617

Query: 615 TNPAAGDSSS--CHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICP 672
           T  A+GD+S+  C + RSVLTIAFQFP+E +LQD+VA MARQYVRS++S+VQRV+MAI P
Sbjct: 618 TAQASGDASADDC-NLRSVLTIAFQFPYELHLQDSVAAMARQYVRSIVSAVQRVSMAISP 676

Query: 673 SGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAIL 732
           S      G ++  G PEA TLA W+CQSY YHLG ELL       + +LK LW + DAIL
Sbjct: 677 SQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGDAEQLLKMLWHYQDAIL 736

Query: 733 CCSLK 737
           CCS K
Sbjct: 737 CCSFK 741


>sp|Q2QM96|HOX33_ORYSJ Homeobox-leucine zipper protein HOX33 OS=Oryza sativa subsp.
           japonica GN=HOX33 PE=2 SV=1
          Length = 855

 Score = 1033 bits (2670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/761 (67%), Positives = 605/761 (79%), Gaps = 28/761 (3%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MA      + ++  SSS +    Q+D GKYVRYT EQVEALERVY+ECPKPSSLRRQQLI
Sbjct: 1   MAAAAVGGRGERLSSSSPTAAAPQVDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLI 60

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKL AMNKLLMEENDRLQKQVS
Sbjct: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVS 120

Query: 121 QLVCENGYMKQQLRT-APATTDASCDSVVTTPQHSL----------RDANNPAGLLSIAE 169
           +LV ENGYM+ QL   + ATTD SC+SVVT+ QH            RDANNPAGLL+IAE
Sbjct: 121 RLVYENGYMRTQLHNPSAATTDTSCESVVTSGQHHQQQNPAVLHPQRDANNPAGLLAIAE 180

Query: 170 ETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEI 229
           ETLAEF+SKATGTAV+WVQM GMKPGPDS+GI A+S +CSGVAARACGLVSLEPTK+AEI
Sbjct: 181 ETLAEFMSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEI 240

Query: 230 LKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGS 289
           LKDRPSW+RDCR +++  + P GN GTIEL+Y Q YAPTTLA  RDFWTLRYT+ L++GS
Sbjct: 241 LKDRPSWYRDCRCVDIIHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGS 300

Query: 290 LVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPE 349
           LV+CERSL+ S  GP+  +   F+RAE+LPSG LIRPC+GGGS+I+IVDH++L+AWSVPE
Sbjct: 301 LVICERSLTQSTGGPSGPNTPNFIRAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPE 360

Query: 350 VLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDA 399
           VLRPLYES K++AQ+MTIA          E+SGE+ YG GRQPAV RTFSQRLSRGFNDA
Sbjct: 361 VLRPLYESPKILAQKMTIAALRHIRQIAHESSGEIPYGAGRQPAVFRTFSQRLSRGFNDA 420

Query: 400 VNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQN 456
           V+GF DDGWSL++ DG+ED+ I+VNS+ +    S+ + +  F    GGILCAKASMLLQN
Sbjct: 421 VSGFPDDGWSLLSSDGSEDITISVNSSPNKLVGSHVSPNPLFSTVGGGILCAKASMLLQN 480

Query: 457 VPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEH 516
           VPPALLVRFLREHRSEWAD  VDAYSAASL+A  YA PG+R + F GSQ+I+PL HT+EH
Sbjct: 481 VPPALLVRFLREHRSEWADPGVDAYSAASLRASPYAVPGLRTSGFMGSQVILPLAHTLEH 540

Query: 517 EELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPL 576
           EE LEVIRLEGH  + ++  +SRD++LLQ+CSGVDENA  A ++LVFAPIDE F DD PL
Sbjct: 541 EEFLEVIRLEGHGFSHDEVLLSRDMYLLQLCSGVDENATSASAQLVFAPIDESFADDAPL 600

Query: 577 LPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAF 636
           LPSGFR+IPLD+K     D  +A RTLDL S+LEVGP     A   +S    RSVLTIAF
Sbjct: 601 LPSGFRVIPLDTKM----DGPSATRTLDLASALEVGPGGASRASVEASGTCNRSVLTIAF 656

Query: 637 QFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHW 696
           QF +E++L+++VA MAR YVR+V++SVQRVA+AI PS L P +G K  P SPEALTLA W
Sbjct: 657 QFSYENHLRESVAAMARSYVRAVMASVQRVAVAIAPSRLGPQIGMKHPPASPEALTLASW 716

Query: 697 ICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           I +SY  H GA++  SD+   DS L  LW+HSDAILCCSLK
Sbjct: 717 IGRSYRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLK 757


>sp|A2ZMN9|HOX33_ORYSI Homeobox-leucine zipper protein HOX33 OS=Oryza sativa subsp. indica
           GN=HOX33 PE=2 SV=2
          Length = 855

 Score = 1033 bits (2670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/761 (67%), Positives = 605/761 (79%), Gaps = 28/761 (3%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           MA      + ++  SSS +    Q+D GKYVRYT EQVEALERVY+ECPKPSSLRRQQLI
Sbjct: 1   MAAAAVGGRGERLSSSSPTAAAPQVDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLI 60

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKL AMNKLLMEENDRLQKQVS
Sbjct: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVS 120

Query: 121 QLVCENGYMKQQLRT-APATTDASCDSVVTTPQHSL----------RDANNPAGLLSIAE 169
           +LV ENGYM+ QL   + ATTD SC+SVVT+ QH            RDANNPAGLL+IAE
Sbjct: 121 RLVYENGYMRTQLHNPSAATTDTSCESVVTSGQHHQQQNPAVLHPQRDANNPAGLLAIAE 180

Query: 170 ETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEI 229
           ETLAEF+SKATGTAV+WVQM GMKPGPDS+GI A+S +CSGVAARACGLVSLEPTK+AEI
Sbjct: 181 ETLAEFMSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEI 240

Query: 230 LKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGS 289
           LKDRPSW+RDCR +++  + P GN GTIEL+Y Q YAPTTLA  RDFWTLRYT+ L++GS
Sbjct: 241 LKDRPSWYRDCRCVDIIHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGS 300

Query: 290 LVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPE 349
           LV+CERSL+ S  GP+  +   F+RAE+LPSG LIRPC+GGGS+I+IVDH++L+AWSVPE
Sbjct: 301 LVICERSLTQSTGGPSGPNTPNFIRAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPE 360

Query: 350 VLRPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDA 399
           VLRPLYES K++AQ+MTIA          E+SGE+ YG GRQPAV RTFSQRLSRGFNDA
Sbjct: 361 VLRPLYESPKILAQKMTIAALRHIRQIAHESSGEIPYGAGRQPAVFRTFSQRLSRGFNDA 420

Query: 400 VNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQN 456
           V+GF DDGWSL++ DG+ED+ I+VNS+ +    S+ + +  F    GGILCAKASMLLQN
Sbjct: 421 VSGFPDDGWSLLSSDGSEDITISVNSSPNKLVGSHVSPNPLFSTVGGGILCAKASMLLQN 480

Query: 457 VPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEH 516
           VPPALLVRFLREHRSEWAD  VDAYSAASL+A  YA PG+R + F GSQ+I+PL HT+EH
Sbjct: 481 VPPALLVRFLREHRSEWADPGVDAYSAASLRASPYAVPGLRTSGFMGSQVILPLAHTLEH 540

Query: 517 EELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPL 576
           EE LEVIRLEGH  + ++  +SRD++LLQ+CSGVDENA  A ++LVFAPIDE F DD PL
Sbjct: 541 EEFLEVIRLEGHGFSHDEVLLSRDMYLLQLCSGVDENATSASAQLVFAPIDESFADDAPL 600

Query: 577 LPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAF 636
           LPSGFR+IPLD+K     D  +A RTLDL S+LEVGP     A   +S    RSVLTIAF
Sbjct: 601 LPSGFRVIPLDTKM----DGPSATRTLDLASALEVGPGGASRASVEASGTCNRSVLTIAF 656

Query: 637 QFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHW 696
           QF +E++L+++VA MAR YVR+V++SVQRVA+AI PS L P +G K  P SPEALTLA W
Sbjct: 657 QFSYENHLRESVAAMARSYVRAVMASVQRVAVAIAPSRLGPQIGMKHPPASPEALTLASW 716

Query: 697 ICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLK 737
           I +SY  H GA++  SD+   DS L  LW+HSDAILCCSLK
Sbjct: 717 IGRSYRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLK 757


>sp|O04291|ATB14_ARATH Homeobox-leucine zipper protein ATHB-14 OS=Arabidopsis thaliana
           GN=ATHB-14 PE=1 SV=1
          Length = 852

 Score = 1013 bits (2618), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/737 (69%), Positives = 588/737 (79%), Gaps = 29/737 (3%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LD+GKYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 21  LDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 80

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT-DAS 143
           EKQRKEA+RLQTVNRKL AMNKLLMEENDRLQKQVS LV ENG+MK QL TA  TT D S
Sbjct: 81  EKQRKEAARLQTVNRKLNAMNKLLMEENDRLQKQVSNLVYENGHMKHQLHTASGTTTDNS 140

Query: 144 CDSVVTT----------PQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           C+SVV +          PQH  RDANNPAGLLSIAEE LAEFLSKATGTAVDWVQM GMK
Sbjct: 141 CESVVVSGQQHQQQNPNPQHQQRDANNPAGLLSIAEEALAEFLSKATGTAVDWVQMIGMK 200

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDS+GI AIS++CSG+AARACGLVSLEP K+AEILKDRPSW RDCRS++  ++ PAGN
Sbjct: 201 PGPDSIGIVAISRNCSGIAARACGLVSLEPMKVAEILKDRPSWLRDCRSVDTLSVIPAGN 260

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+YTQ YAPTTLA ARDFWTLRY+T L++GS VVCERSL+ +  GP    ++ FV
Sbjct: 261 GGTIELIYTQMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSLTSATGGPTGPPSSNFV 320

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RAEM PSG LIRPCDGGGSI+HIVDH++L+AWSVPEV+RPLYESSK++AQ+MT+A     
Sbjct: 321 RAEMKPSGFLIRPCDGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAALRHV 380

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEV YG GRQPAVLRTFSQRL RGFNDAVNGF DDGWS M  DGAEDV + +
Sbjct: 381 RQIAQETSGEVQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMGSDGAEDVTVMI 440

Query: 424 NSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           N +      S   NS   +F  G+LCAKASMLLQNVPPA+LVRFLREHRSEWAD+ VDAY
Sbjct: 441 NLSPGKFGGSQYGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLREHRSEWADYGVDAY 500

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
           +AASL+A  +A P  R   F  +Q+I+PL  T+EHEE LEV+RLEGH+ + ED  ++RD+
Sbjct: 501 AAASLRASPFAVPCARAGGFPSNQVILPLAQTVEHEESLEVVRLEGHAYSPEDMGLARDM 560

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
           +LLQ+CSGVDEN VG C++LVFAPIDE F DD PLLPSGFRIIPL+ K+  TP+  +A+R
Sbjct: 561 YLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRIIPLEQKS--TPNGASANR 618

Query: 602 TLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           TLDL S+LE G        D + C+  RSVLTIAFQF F+++ +D+VA+MARQYVRS++ 
Sbjct: 619 TLDLASALE-GSTRQAGEADPNGCNF-RSVLTIAFQFTFDNHSRDSVASMARQYVRSIVG 676

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS-VGGDSV 720
           S+QRVA+AI P   S  + P   P SPEALTL  WI +SYS H GA+L  SDS   GD++
Sbjct: 677 SIQRVALAIAPRPGS-NISPISVPTSPEALTLVRWISRSYSLHTGADLFGSDSQTSGDTL 735

Query: 721 LKNLWQHSDAILCCSLK 737
           L  LW HSDAILCCSLK
Sbjct: 736 LHQLWNHSDAILCCSLK 752


>sp|O04292|ATBH9_ARATH Homeobox-leucine zipper protein ATHB-9 OS=Arabidopsis thaliana
           GN=ATHB-9 PE=1 SV=1
          Length = 841

 Score =  990 bits (2560), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/738 (67%), Positives = 578/738 (78%), Gaps = 38/738 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
            D+GKYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPIL NIEP+QIKVWFQNRRCR
Sbjct: 17  FDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCR 76

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT-DAS 143
           EKQRKE++RLQTVNRKL+AMNKLLMEENDRLQKQVS LV ENG+MK ++ TA  TT D S
Sbjct: 77  EKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVYENGFMKHRIHTASGTTTDNS 136

Query: 144 CDSVVT----------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
           C+SVV           T QH  RD NNPA LLSIAEETLAEFL KATGTAVDWVQM GMK
Sbjct: 137 CESVVVSGQQRQQQNPTHQHPQRDVNNPANLLSIAEETLAEFLCKATGTAVDWVQMIGMK 196

Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
           PGPDS+GI A+S++CSG+AARACGLVSLEP K+AEILKDRPSWFRDCR +E   + P GN
Sbjct: 197 PGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRPSWFRDCRCVETLNVIPTGN 256

Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV 313
            GTIEL+ TQ YAPTTLA ARDFWTLRY+T+L++GS VVCERSL+ +  GPN   ++ FV
Sbjct: 257 GGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGPLSSSFV 316

Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
           RA+ML SG LIRPCDGGGSIIHIVDH++L+  SVPEVLRPLYESSK++AQ+MT+A     
Sbjct: 317 RAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALRHV 376

Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
                ETSGEV Y  GRQPAVLRTFSQRL RGFNDAVNGF DDGWS M+ DG ED+ I +
Sbjct: 377 RQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMSSDGGEDITIMI 436

Query: 424 NSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           NS+ +    S   +S   +F  G+LCAKASMLLQNVPP +L+RFLREHR+EWAD+ VDAY
Sbjct: 437 NSSSAKFAGSQYGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLREHRAEWADYGVDAY 496

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
           SAASL+A  YA P +R   F  +Q+I+PL  T+EHEE LEV+RL GH+ + ED  +SRD+
Sbjct: 497 SAASLRATPYAVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLGGHAYSPEDMGLSRDM 556

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
           +LLQ+CSGVDEN VG C++LVFAPIDE F DD PLLPSGFR+IPLD KT +  D  +A R
Sbjct: 557 YLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPLDQKT-NPNDHQSASR 615

Query: 602 TLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
           T DL SSL+    T+       S  ++R VLTIAFQF F+++ +DNVATMARQYVR+V+ 
Sbjct: 616 TRDLASSLDGSTKTD-------SETNSRLVLTIAFQFTFDNHSRDNVATMARQYVRNVVG 668

Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSD--SVGGDS 719
           S+QRVA+AI P   S  L     P SPEALTL  WI +SYS H GA+L  +D  S GGD+
Sbjct: 669 SIQRVALAITPRPGSMQL-----PTSPEALTLVRWITRSYSIHTGADLFGADSQSCGGDT 723

Query: 720 VLKNLWQHSDAILCCSLK 737
           +LK LW HSDAILCCSLK
Sbjct: 724 LLKQLWDHSDAILCCSLK 741


>sp|Q9ZU11|ATB15_ARATH Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis thaliana
           GN=ATHB-15 PE=1 SV=1
          Length = 836

 Score =  954 bits (2465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/739 (65%), Positives = 572/739 (77%), Gaps = 39/739 (5%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           LDNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 13  LDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR--TAPATTDA 142
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN Y +Q     + PA  D 
Sbjct: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQHTPNPSLPAK-DT 131

Query: 143 SCDSVVTTPQHSL------RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGP 196
           SC+SVVT+ QH L      RDA+ PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKPGP
Sbjct: 132 SCESVVTSGQHQLASQNPQRDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGP 190

Query: 197 DSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGT 256
           DS+GI AIS  C+GVAARACGLV LEPT++AEI+KDRPSWFR+CR++EV  + P  N GT
Sbjct: 191 DSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVMNVLPTANGGT 250

Query: 257 IELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAE 316
           +ELLY Q YAPTTLAP RDFW LRYT+ L++GSLVVCERSL  +  GP+      FVRAE
Sbjct: 251 VELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAE 310

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ET 370
           ML SG LIRPCDGGGSIIHIVDH++LEA SVPEVLRPLYES KV+AQ+ T+A      + 
Sbjct: 311 MLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQLKQI 370

Query: 371 SGEV------VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
           + EV      V G GR+PA LR  SQRLSRGFN+AVNGF D+GWS++  D  +DV I VN
Sbjct: 371 AQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-DSMDDVTITVN 429

Query: 425 STKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
           S+       N T +  F      +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+DAY
Sbjct: 430 SSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAY 489

Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
            AA++K G    P        G Q+I+PL HTIEHEE +EVI+LEG   + EDA V RDI
Sbjct: 490 LAAAVKVG----PCSARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDI 545

Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
            LLQ+CSG+DENAVG C+EL+FAPID  F DD PLLPSGFRIIPLDS      +  + +R
Sbjct: 546 FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS----AKEVSSPNR 601

Query: 602 TLDLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRS 658
           TLDL S+LE+G A   A+ D   +S+C   RSV+TIAF+F  ES++Q++VA+MARQYVR 
Sbjct: 602 TLDLASALEIGSAGTKASTDQSGNSTC--ARSVMTIAFEFGIESHMQEHVASMARQYVRG 659

Query: 659 VISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD 718
           +ISSVQRVA+A+ PS +S  +G +   G+PEA TLA WICQSY  ++G ELL+S+S G +
Sbjct: 660 IISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSDGNE 719

Query: 719 SVLKNLWQHSDAILCCSLK 737
           S+LKNLW H+DAI+CCS+K
Sbjct: 720 SILKNLWHHTDAIICCSMK 738


>sp|Q39123|ATHB8_ARATH Homeobox-leucine zipper protein ATHB-8 OS=Arabidopsis thaliana
           GN=ATHB-8 PE=1 SV=1
          Length = 833

 Score =  937 bits (2421), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/743 (63%), Positives = 574/743 (77%), Gaps = 36/743 (4%)

Query: 18  GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
           GS N H +DNGKYVRYT EQVEALER+Y++CPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 4   GSNNSHNMDNGKYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVW 63

Query: 78  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ--QLRT 135
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LV EN Y +Q  Q + 
Sbjct: 64  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSYFRQHPQNQG 123

Query: 136 APATTDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
             ATTD SC+SVVT      TPQH  RDA+ PAGLLSIA+ETL EF+SKATGTAV+WVQM
Sbjct: 124 NLATTDTSCESVVTSGQHHLTPQHQPRDAS-PAGLLSIADETLTEFISKATGTAVEWVQM 182

Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
           PGMKPGPDS+GI AIS  C+G+AARACGLV L+PT++AEILKD+P W RDCRSL++  + 
Sbjct: 183 PGMKPGPDSIGIVAISHGCTGIAARACGLVGLDPTRVAEILKDKPCWLRDCRSLDIVNVL 242

Query: 250 PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASA 309
              N GT+EL+Y Q YAPTTLAPARDFW LRYT+ +++GSLV+CERSL+ +  GP+   +
Sbjct: 243 STANGGTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGPSMPPS 302

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA- 368
             FVRAE+LPSG LIRPC+GGGSI+HIVDH +LE WSVPEVLR LYESS ++AQR T+A 
Sbjct: 303 PHFVRAEILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRTTMAA 362

Query: 369 ---------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                    E S   V G GR+PA LR  SQRLS+GFN+AVNGF+D+GWS++  DG +DV
Sbjct: 363 LRYLRQISQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFSDEGWSILESDGIDDV 422

Query: 420 IIAVNS--TKSLSTASNP--TNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWAD 475
            + VNS  TK + T+S P      +    +LCAKASMLLQNVPP++L+RFLREHR EWAD
Sbjct: 423 TLLVNSSPTKMMMTSSLPFANGYTSMPSAVLCAKASMLLQNVPPSILLRFLREHRQEWAD 482

Query: 476 FNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDA 535
            ++DAYSAA++KAG  + P  RP  F G Q+I+PL HTIE+EE +EVI+LE     QED 
Sbjct: 483 NSIDAYSAAAIKAGPCSLPIPRPGSF-GGQVILPLAHTIENEEFMEVIKLESLGHYQEDM 541

Query: 536 FVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPD 595
            +  DI LLQ+CSGVDENAV +C+EL+FAPID  F DD P++PSGFRIIPLDSK+    +
Sbjct: 542 MMPADIFLLQMCSGVDENAVESCAELIFAPIDASFSDDAPIIPSGFRIIPLDSKS----E 597

Query: 596 TLTAHRTLDLTSSLEVGPATNPAAGDS-SSCHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
            L+ +RTLDL S+L+VG  T   AGDS  S  +++SV+TIAFQ  FE ++Q+NVA+MARQ
Sbjct: 598 GLSPNRTLDLASALDVGSRT---AGDSCGSRGNSKSVMTIAFQLAFEMHMQENVASMARQ 654

Query: 655 YVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS 714
           YVRSVI+SVQRVA+A+ PS    + G +  P SPEA TLA WI  SY  +LG +LL+   
Sbjct: 655 YVRSVIASVQRVALALSPSSHQLS-GLRPPPASPEAHTLARWISHSYRCYLGVDLLKPH- 712

Query: 715 VGGDSVLKNLWQHSDAILCCSLK 737
             G  +LK+LW H DA++CCSLK
Sbjct: 713 --GTDLLKSLWHHPDAVMCCSLK 733


>sp|A2WLR5|HOX29_ORYSI Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. indica
           GN=HOX29 PE=2 SV=2
          Length = 861

 Score =  858 bits (2218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/772 (58%), Positives = 554/772 (71%), Gaps = 69/772 (8%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D  KYVRYT EQVEALER+Y ECPKPSSLRRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 1   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 60

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENG----------------- 127
           EKQRKE+SRLQ +NRKLTAMNKLLMEENDRLQKQVSQLV ++G                 
Sbjct: 61  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 120

Query: 128 -----YMKQQLRTAPATTDASCDSVVTTP-----------QHSLRDANNPAGLLSIAEET 171
                    QL TA   TD SC+SVVT+            Q   RDA+ PAGL+SIAEET
Sbjct: 121 PQAAAAAGHQLATA---TDTSCESVVTSGHHHQQQQHNVVQPPPRDAS-PAGLMSIAEET 176

Query: 172 LAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILK 231
           L EFLSKATGTAV+W+QMPGMKPGPDS+GI AIS  C+GVAARACGLV +EP K+AEILK
Sbjct: 177 LTEFLSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILK 236

Query: 232 DRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLV 291
           DRP W RDCRS++V  + PAG  GTIELLY Q YAPTTLAPARDFW LRYT+ LD+GSLV
Sbjct: 237 DRPLWLRDCRSMDVVNVLPAGANGTIELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLV 296

Query: 292 VCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL 351
           VCERSLS    GP+      F+R EMLPSG LIRP DGGGS+IHIVDH++LE WSVPEV+
Sbjct: 297 VCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGGGSVIHIVDHMDLEPWSVPEVV 356

Query: 352 RPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVN 401
           RPLYESS +VAQ++++A          E +  V+ G GRQPA LR  SQ+L+RGFN+A+N
Sbjct: 357 RPLYESSAMVAQKISMAALRYLRQVAHEDTRSVITGWGRQPAALRALSQKLTRGFNEALN 416

Query: 402 GFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLG-GILCAKASMLLQNVPPA 460
           G  DDGWS++  DG +DV I+VNS+K +   +  ++ L  +  G+LCAKASMLLQ+V P 
Sbjct: 417 GLADDGWSVIESDGVDDVCISVNSSKVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPP 476

Query: 461 LLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELL 520
            L++FLREHRS+WAD N+DA+ A+++K      P  R   F+G Q+I+PL HT E EE L
Sbjct: 477 SLLQFLREHRSQWADSNLDAFFASAMKPNFCNLPMSRLGGFSG-QVILPLAHTFEPEEFL 535

Query: 521 EVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSG 580
           EVI+L G++   +D  V RD+ LLQ+ +GV+E++ G CSEL+FAPID  F DD PLLPSG
Sbjct: 536 EVIKL-GNASNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSPLLPSG 594

Query: 581 FRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVG-PATNPAA--GDSSSC------HHTRSV 631
           FRIIP+DS      DT + + TLDL S+LE   P +  +   G   +C        +++V
Sbjct: 595 FRIIPIDSPL----DTSSPNCTLDLASTLEAATPRSRISGVNGGGGTCAAAAASSSSKAV 650

Query: 632 LTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSP----TLGPKLSPGS 687
           +TIAFQF F+ +LQD+VA MARQY+R++ISSVQR+A+A+  S L P        +LSP +
Sbjct: 651 MTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAAAAAAQLSPVT 710

Query: 688 PEALTLAHWICQSYSYHLGAELLRS--DSVGGDSVLKNLWQHSDAILCCSLK 737
           PEA TL  WICQSY +H GAEL++S   +   +S+LK +W H  AILCCSLK
Sbjct: 711 PEAATLPRWICQSYRFHFGAELIKSVDANSSNESILKAVWHHPSAILCCSLK 762


>sp|Q5QMZ9|HOX29_ORYSJ Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp.
           japonica GN=HOX29 PE=2 SV=2
          Length = 868

 Score =  848 bits (2190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/772 (57%), Positives = 551/772 (71%), Gaps = 69/772 (8%)

Query: 25  LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           +D  KYVRYT EQVEALER+Y ECPKPSSLRRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 8   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 67

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENG--------YMKQ----- 131
           EKQRKE+SRLQ +NRKLTAMNKLLMEENDRLQKQVSQLV ++G         M++     
Sbjct: 68  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 127

Query: 132 ---------QLRTAPATTDASCDSVVTTP-----------QHSLRDANNPAGLLSIAEET 171
                    QL TA   TD SC+SVVT+            Q   RDA+ PAGL+SIAEET
Sbjct: 128 PQAAAAAGHQLATA---TDTSCESVVTSGHHHQQQQHNVVQPPPRDAS-PAGLMSIAEET 183

Query: 172 LAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILK 231
           L EFLSKATGTAV+W+QMPGMKPGPDS+GI AIS  C+GVAARACGLV +EP K+AEILK
Sbjct: 184 LTEFLSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILK 243

Query: 232 DRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLV 291
           DRP W RDCRS++V  + PAG  GTIELLY Q YAPTTLAPARDFW LRYT+ LD+GSLV
Sbjct: 244 DRPLWLRDCRSMDVVNVLPAGANGTIELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLV 303

Query: 292 VCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL 351
           VCERSLS    GP+      F+R EMLPSG LIRP D GGS+IHIVDH++LE WSVPEV+
Sbjct: 304 VCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDVGGSVIHIVDHMDLEPWSVPEVV 363

Query: 352 RPLYESSKVVAQRMTIA----------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVN 401
           RPLYESS +VAQ++++A          E +  V+ G GRQPA LR  SQ+L+RGFN+A+N
Sbjct: 364 RPLYESSAMVAQKISMAALRYLRQVAHEDTRSVITGWGRQPAALRALSQKLTRGFNEALN 423

Query: 402 GFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLG-GILCAKASMLLQNVPPA 460
           G  DDGWS++  DG +DV I+VNS+K +   +  ++ L  +  G+LCAKASMLLQ+V P 
Sbjct: 424 GLADDGWSVIESDGVDDVCISVNSSKVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPP 483

Query: 461 LLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELL 520
            L++FLREHRS+WAD N+DA+ A+++K      P  R   F+G Q+I+PL HT E EE L
Sbjct: 484 SLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSRLGGFSG-QVILPLAHTFEPEEFL 542

Query: 521 EVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSG 580
           EVI+L G++   +D  V RD+ LLQ+ +GV+E++ G CSEL+FAPID  F DD PLLPSG
Sbjct: 543 EVIKL-GNASNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSPLLPSG 601

Query: 581 FRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP---------ATNPAAGDSSSCHHTRSV 631
           FRIIP+DS      DT + + TLDL S+LE                    +++   +++V
Sbjct: 602 FRIIPIDSPL----DTSSPNCTLDLASTLEAATPRSRISGVNGGGGGCAAAAASSSSKAV 657

Query: 632 LTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGL----SPTLGPKLSPGS 687
           +TIAFQF F+ +LQD+VA MARQY+R++ISSVQR+A+A+  S L    +     +LSP +
Sbjct: 658 MTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAGAAAAQLSPVT 717

Query: 688 PEALTLAHWICQSYSYHLGAELLRSDSVG--GDSVLKNLWQHSDAILCCSLK 737
           PEA TL  WICQSY +H G EL++S       +S+LK +W H  AILCCSLK
Sbjct: 718 PEAATLPRWICQSYRFHFGDELIKSVDANSSNESILKAVWHHPSAILCCSLK 769


>sp|P46607|HGL2_ARATH Homeobox-leucine zipper protein GLABRA 2 OS=Arabidopsis thaliana
           GN=GL2 PE=2 SV=3
          Length = 747

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 156/637 (24%), Positives = 272/637 (42%), Gaps = 116/637 (18%)

Query: 16  SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
           ++G+   ++    KY R+T +Q+  +E ++ E P P   +RQQL ++      + P+Q+K
Sbjct: 91  AAGNKGTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVK 146

Query: 76  VWFQNRRCREK---QRKEASRLQTVNRKLTAMNKLLMEEN--------------DRLQKQ 118
            WFQNRR + K   +R E S L+    KL   NK + E                D L  +
Sbjct: 147 FWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGPDDLHLE 206

Query: 119 VSQLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSK 178
            S+L  E   ++  L   P    ASC       +H L   +   G+ ++ +  +AE  ++
Sbjct: 207 NSKLKAELDKLRAALGRTPYPLQASCSD---DQEHRLGSLDFYTGVFALEKSRIAEISNR 263

Query: 179 AT------GTAVDWVQMPGMKPGPDSVGI------FAISQSCSG------VAARACGLVS 220
           AT       T+ + + +  ++ G + +        F  +Q+ S        A+R  G+V 
Sbjct: 264 ATLELQKMATSGEPMWLRSVETGREILNYDEYLKEFPQAQASSFPGRKTIEASRDAGIVF 323

Query: 221 LEPTKIAEILKDRPSW-------FRDCRSLEVFTM--FPAGNAGTIELLYTQAYAPTTLA 271
           ++  K+A+   D   W            +++V      P+   G I+L++ +    T + 
Sbjct: 324 MDAHKLAQSFMDVGQWKETFACLISKAATVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVV 383

Query: 272 PARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGG 331
           P R+ + +R    L      + + S+S   +  N    A  ++   LPSGC+I     G 
Sbjct: 384 PTREVYFVRSCRQLSPEKWAIVDVSVSVEDS--NTEKEASLLKCRKLPSGCIIEDTSNGH 441

Query: 332 SIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-------------------ETSG 372
           S +  V+HL++ A +V  + R L  +      R  +A                   + S 
Sbjct: 442 SKVTWVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSL 501

Query: 373 EVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTA 432
            V    GR+ +VL+  +QR+++ F  A+   +   W+ +T    +D  + V+S K+L   
Sbjct: 502 GVTTLAGRK-SVLK-MAQRMTQSFYRAIAASSYHQWTKITTKTGQD--MRVSSRKNLHDP 557

Query: 433 SNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAY--SAASLKA 488
             PT      G I+CA +S+ L  V PALL  F R+   R EW   +  A+  S A+L  
Sbjct: 558 GEPT------GVIVCASSSLWLP-VSPALLFDFFRDEARRHEWDALSNGAHVQSIANLSK 610

Query: 489 GSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICS 548
           G          +  G+ + +    T++  E   +  L+  S    ++ V        + +
Sbjct: 611 G----------QDRGNSVAI---QTVKSRE-KSIWVLQDSSTNSYESVV--------VYA 648

Query: 549 GVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIP 585
            VD N     ++LV A  D   P +  +LPSGF IIP
Sbjct: 649 PVDIN----TTQLVLAGHD---PSNIQILPSGFSIIP 678


>sp|Q9LTK3|HDG7_ARATH Homeobox-leucine zipper protein HDG7 OS=Arabidopsis thaliana
           GN=HDG7 PE=2 SV=1
          Length = 682

 Score = 85.5 bits (210), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 146/367 (39%), Gaps = 57/367 (15%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+T+ Q++ LE  + ECP P+  +R +L ++      +E KQIK WFQNRR + K   
Sbjct: 61  YHRHTSYQIQELESFFKECPHPNEKQRLELGKKL----TLESKQIKFWFQNRRTQMKTQL 116

Query: 87  QRKEASRLQTVNRKLTAMNKLLMEEN--------------DRLQKQVSQLVCENGYMKQQ 132
           +R E   L+  N KL   N  L E                  +  +  QL  EN  +K++
Sbjct: 117 ERHENVILKQENEKLRLENSFLKESMRGSLCIDCGGAVIPGEVSFEQHQLRIENAKLKEE 176

Query: 133 LRTAPATTDASCDSVVTTPQHS---LRDANNPAG----------LLSIAEETLAEFLSKA 179
           L    A  +      ++  Q S   +   + P G           + +A E + E L  A
Sbjct: 177 LDRICALANRFIGGSISLEQPSNGGIGSQHLPIGHCVSGGTSLMFMDLAMEAMDELLKLA 236

Query: 180 TGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSW--F 237
                 W      K    S+  F          +R  GLV +    + E L D   W   
Sbjct: 237 ELETSLWSS----KSEKGSMNHFP--------GSRETGLVLINSLALVETLMDTNKWAEM 284

Query: 238 RDC-----RSLEVFTMFPAGN-AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLV 291
            +C      +LEV +    G+  G+I L+  +    + L P +    LRY     +G   
Sbjct: 285 FECIVAVASTLEVISNGSDGSRNGSILLMQAEFQVMSPLVPIKQKKFLRYCKQHGDGLWA 344

Query: 292 VCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL 351
           V + S   +    N  S   +  ++M PSGC+I+    G S +  ++H   E      + 
Sbjct: 345 VVDVSYDINRGNENLKS---YGGSKMFPSGCIIQDIGNGCSKVTWIEHSEYEESHTHSLY 401

Query: 352 RPLYESS 358
           +PL  SS
Sbjct: 402 QPLLSSS 408


>sp|A3BPF2|ROC7_ORYSJ Homeobox-leucine zipper protein ROC7 OS=Oryza sativa subsp.
           japonica GN=ROC7 PE=2 SV=1
          Length = 749

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 166/416 (39%), Gaps = 90/416 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQ 263
           A+R   +V +    + E+L D   W            +LEV +   AGN  G ++L+  +
Sbjct: 318 ASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAE 377

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL----SGSGAGPNPASAAQFVRAEMLP 319
              P+ L P R+   LRY     +G+  V + SL    +G+G G  PA+A    R    P
Sbjct: 378 FQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR---P 434

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAE---------- 369
           SGCLI+    G S +  V+H+  +   V  + +P+  S      R  +A           
Sbjct: 435 SGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLAS 494

Query: 370 ----------TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                      +G +    GR+   +   ++R+   F   V       W+ ++  GAEDV
Sbjct: 495 AMASNVASSGDAGVITTSEGRRS--MLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDV 552

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFN 477
              V + KS+     P        GI+   A+     VPP+ +  FLR+   RSEW    
Sbjct: 553 --RVMTRKSVDDPGRPP-------GIILNAATSFWLPVPPSRVFDFLRDDSTRSEW---- 599

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
            D  S   +                  Q +  + +  +H   + ++R+   +  Q +  +
Sbjct: 600 -DILSNGGV-----------------VQEMAHIANGRDHGNAVSLLRVNNANSNQSNMLI 641

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRII 584
                L + C+    +A G  S +++AP+D +          PD   LLPSGF I+
Sbjct: 642 -----LQECCT----DATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 686



 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 91  RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 146

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E    +  N  L A N+ L  EN R ++ ++   C N
Sbjct: 147 HE----RHENNALRAENEKLRAENMRYKEALANASCPN 180


>sp|A2YR02|ROC7_ORYSI Homeobox-leucine zipper protein ROC7 OS=Oryza sativa subsp. indica
           GN=ROC7 PE=3 SV=1
          Length = 749

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 165/416 (39%), Gaps = 90/416 (21%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGNA-GTIELLYTQ 263
           A+R   +V +    + E+L D   W            +LEV +   AGN  G ++L+  +
Sbjct: 318 ASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAE 377

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSL----SGSGAGPNPASAAQFVRAEMLP 319
              P+ L P R+   LRY     +G+  V + SL    +G+G G  PA+A    R    P
Sbjct: 378 FQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR---P 434

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAE---------- 369
           SGCLI+    G S +  V+H+  +   V  + +P+  S      R  +A           
Sbjct: 435 SGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLAS 494

Query: 370 ----------TSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
                      +G +    GR+   +   ++R+   F   V       W+ ++  GAEDV
Sbjct: 495 AMASNVASSGDAGVITTSEGRRS--MLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDV 552

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFN 477
              V + KS+     P        GI+   A+     VPP+ +  FLR+   RSEW    
Sbjct: 553 --RVMTRKSVDDPGRPP-------GIVLNAATSFWLPVPPSRVFDFLRDDSTRSEW---- 599

Query: 478 VDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFV 537
            D  S   +                  Q +  + +  +H   + ++R+   +  Q +  +
Sbjct: 600 -DILSNGGV-----------------VQEMAHIANGRDHGNAVSLLRVNNANSNQSNMLI 641

Query: 538 SRDIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRII 584
                 LQ C     +A G  S +++AP+D +          PD   LLPSGF I+
Sbjct: 642 ------LQECC---TDATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 686



 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 91  RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 146

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E    +  N  L A N+ L  EN R ++ ++   C N
Sbjct: 147 HE----RHENNALRAENEKLRAENMRYKEALANASCPN 180


>sp|Q8L7H4|HDG4_ARATH Homeobox-leucine zipper protein HDG4 OS=Arabidopsis thaliana
           GN=HDG4 PE=1 SV=1
          Length = 709

 Score = 80.1 bits (196), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 181/436 (41%), Gaps = 76/436 (17%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ E   P +  R +L ++      + P Q+K WFQN+R + K  
Sbjct: 91  RYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKL----GLSPIQVKFWFQNKRTQIK-- 144

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENGYMKQQ---LRTA 136
             A + ++ N KL A N+ L  E+  +Q     L C         EN  ++Q+   LR+ 
Sbjct: 145 --AQQSRSDNAKLKAENETLKTESQNIQSNFQCLFCSTCGHNLRLENARLRQELDRLRSI 202

Query: 137 PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM---- 192
            +  + S    + TP+    + NN   +L IAEE  A  +  A   A +  +M  +    
Sbjct: 203 VSMRNPSPSQEI-TPE---TNKNNNDNML-IAEEEKAIDMELAVSCARELAKMCDINEPL 257

Query: 193 --KPGPDSVGIFAISQSCSGV---------------AARACGLVSLEPTKIAEILKDRPS 235
             K   D+  +    +    +               A+RA  ++ L    + +   D   
Sbjct: 258 WNKKRLDNESVCLNEEEYKKMFLWPLMNDDDRFRREASRANAVIMLNCITLVKAFLDADK 317

Query: 236 W-------FRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTT-TLDN 287
           W           ++ ++ +   +G +GT+ L++ +    + L P R+ + LRY     + 
Sbjct: 318 WSEMFFPIVSSAKTAQIISSGASGPSGTLLLMFAELQVVSPLVPTREAYFLRYVEQNAEE 377

Query: 288 GSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSV 347
           G  +V +  +        PASA    +    PSGC+I+    G S +  V+H+ +E   V
Sbjct: 378 GKWMVVDFPIDRI----KPASATTTDQYRRKPSGCIIQAMRNGYSQVTWVEHVEVEEKHV 433

Query: 348 -PEVLRPLYES----------SKVVAQRMTIAETSGEVVYGLGRQPAV-----LRTFSQR 391
             EV+R   ES          S +  Q   +A      +  LG  P+V     L   SQR
Sbjct: 434 QDEVVREFVESGVAFGAERWLSVLKRQCERMASLMATNITDLGVIPSVEARKNLMKLSQR 493

Query: 392 LSRGFNDAVNGFNDDG 407
           + + F   +N  N  G
Sbjct: 494 MVKTF--CLNIINSHG 507


>sp|Q6ZAR0|ROC1_ORYSJ Homeobox-leucine zipper protein ROC1 OS=Oryza sativa subsp.
           japonica GN=ROC1 PE=2 SV=1
          Length = 784

 Score = 77.8 bits (190), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 200/501 (39%), Gaps = 117/501 (23%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSL-------EVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +  + + EIL D   +     S+       EV +   AGN  G ++++  +
Sbjct: 354 ASRHGAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYNGALQVMSME 413

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P+P       +    PSGCL
Sbjct: 414 FQVPSPLVPTRESYFVRYCKNNSDGTWAVVDVSLDS--LRPSPVQ-----KCRRRPSGCL 466

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA------------QRMTIAETS 371
           I+    G S +  V+H+ ++  SV  + +PL  S                 +R+  A  S
Sbjct: 467 IQEMPNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMAS 526

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 527 NIPNGDLGVITSVEGRKS--MLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDV--RVM 582

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+   A+     VPPA +  FLR+   RSEW     D  S
Sbjct: 583 TRKSVDDPGRPP-------GIVLNAATSFWLPVPPAAVFDFLRDETSRSEW-----DILS 630

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
                                 Q +  + +  +H   + ++R+   +  Q +  +     
Sbjct: 631 NGG-----------------AVQEMAHIANGRDHGNSVSLLRVNSANSNQSNMLI----- 668

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDT 593
           L + C+    +A G  S +V+AP+D +          PD   LLPSGF I+P        
Sbjct: 669 LQESCT----DASG--SYVVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-------- 714

Query: 594 PDTLTAHRTLDLTSSLEVGPATN--PAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATM 651
                             GP+ N   A G++ S     S+LT+AFQ   +S     ++  
Sbjct: 715 -----------------DGPSGNAQAAVGENGSGSGGGSLLTVAFQILVDSVPTAKLSLG 757

Query: 652 ARQYVRSVIS-SVQRVAMAIC 671
           +   V S+I+ +V+R+  A+C
Sbjct: 758 SVATVNSLIACTVERIKAAVC 778



 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 109 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 164

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E       N +L A N  L  EN R ++ +S   C N
Sbjct: 165 HERHE----NAQLRAENDKLRAENMRYKEALSSASCPN 198


>sp|Q9ZV65|HDG3_ARATH Homeobox-leucine zipper protein HDG3 OS=Arabidopsis thaliana
           GN=HDG3 PE=2 SV=2
          Length = 725

 Score = 77.0 bits (188), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 121/537 (22%), Positives = 201/537 (37%), Gaps = 120/537 (22%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           KY R+T  Q+  +E  + ECP P   +R  L  +      ++P QIK WFQN+R + K  
Sbjct: 71  KYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQL----GLDPVQIKFWFQNKRTQNKNQ 126

Query: 87  -QRKEASRLQTVNRKL----------------------TAMNKLLMEE------NDRLQK 117
            +R E S L+ +N  L                      TA+ ++  EE      N RL +
Sbjct: 127 QERFENSELRNLNNHLRSENQRLREAIHQALCPKCGGQTAIGEMTFEEHHLRILNARLTE 186

Query: 118 QVSQLVCENGYMKQ----QLRTAPATT--------DASCDSVVTTPQHSLR-----DANN 160
           ++ QL      + +     +R+ P  +        +    S      HS       DAN 
Sbjct: 187 EIKQLSVTAEKISRLTGIPVRSHPRVSPPNPPPNFEFGMGSKGNVGNHSRETTGPADANT 246

Query: 161 PAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSC-SGV-------- 211
              ++ +A   + E L  A      W  M G      ++ +    ++  +G+        
Sbjct: 247 KPIIMELAFGAMEELLVMAQVAEPLW--MGGFNGTSLALNLDEYEKTFRTGLGPRLGGFR 304

Query: 212 --AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLY 261
             A+R   LV++ PT I E+L     W           R+ E      AGN  G ++++ 
Sbjct: 305 TEASRETALVAMCPTGIVEMLMQENLWSTMFAGIVGRARTHEQIMADAAGNFNGNLQIMS 364

Query: 262 TQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSG 321
            +    + L   R+ + +RY      G   V + S+       N       ++    PSG
Sbjct: 365 AEYQVLSPLVTTRESYFVRYCKQQGEGLWAVVDISIDHLLPNIN-------LKCRRRPSG 417

Query: 322 CLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQ 381
           CLI+    G S +  V+H+ ++      +   L  + +  A    +    G +V    R 
Sbjct: 418 CLIQEMHSGYSKVTWVEHVEVDDAGSYSIFEKLICTGQAFAANRWV----GTLVRQCERI 473

Query: 382 PAVLRT-----------------------FSQRLSRGFNDAVNGFNDDGWSLMTCDGAED 418
            ++L T                        ++R++R F   +   N  G ++ +  G E 
Sbjct: 474 SSILSTDFQSVDSGDHITLTNHGKMSMLKIAERIARTFFAGMT--NATGSTIFS--GVEG 529

Query: 419 VIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE--HRSEW 473
             I V + KS++    P       G I+CA  S  L   PP  +  FLRE  HR  W
Sbjct: 530 EDIRVMTMKSVNDPGKPP------GVIICAATSFWLP-APPNTVFDFLREATHRHNW 579


>sp|Q93V99|PDF2_ARATH Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 OS=Arabidopsis
           thaliana GN=PDF2 PE=2 SV=1
          Length = 743

 Score = 74.3 bits (181), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 111/496 (22%), Positives = 199/496 (40%), Gaps = 104/496 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++  +
Sbjct: 307 ASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVMTAE 366

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +GS  V + SL       +   +   +R    PSGCL
Sbjct: 367 FQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLD------SLRPSTPILRTRRRPSGCL 420

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGE---------- 373
           I+    G S +  ++H+ ++  SV  + +PL +S      +  +A    +          
Sbjct: 421 IQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMAS 480

Query: 374 -------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNST 426
                  V+     + ++L+  ++R+   F   V       W+ M+  G++DV   V + 
Sbjct: 481 NIPGDLSVITSPEGRKSMLK-LAERMVMSFCSGVGASTAHAWTTMSTTGSDDV--RVMTR 537

Query: 427 KSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSAA 484
           KS+     P        GI+ + A+     V P  +  FLR+   R EW     D  S  
Sbjct: 538 KSMDDPGRPP-------GIVLSAATSFWIPVAPKRVFDFLRDENSRKEW-----DILSNG 585

Query: 485 SLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLL 544
            +                  Q +  + +  E    + ++R+   + +Q +  +     L 
Sbjct: 586 GM-----------------VQEMAHIANGHEPGNCVSLLRVNSGNSSQSNMLI-----LQ 623

Query: 545 QICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIPLDSKTPDTPD 595
           + C+    +A G  S +++AP+D +          PD   LLPSGF I+P  S      +
Sbjct: 624 ESCT----DASG--SYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGSVGGGDGN 677

Query: 596 TLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQY 655
               H+ +  T+S             S SC    S+LT+AFQ   +S     ++  +   
Sbjct: 678 Q---HQEMVSTTS-------------SGSCGG--SLLTVAFQILVDSVPTAKLSLGSVAT 719

Query: 656 VRSVIS-SVQRVAMAI 670
           V S+I  +V+R+  A+
Sbjct: 720 VNSLIKCTVERIKAAV 735



 Score = 70.9 bits (172), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L R+     N+EP Q+K WFQN+R + K +
Sbjct: 65  RYHRHTQRQIQELESFFKECPHPDDKQRKELSRDL----NLEPLQVKFWFQNKRTQMKAQ 120

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E       N+ L + N  L  EN+R ++ +S   C N
Sbjct: 121 SERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 154


>sp|A2ZAI7|ROC3_ORYSI Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp. indica
           GN=ROC3 PE=3 SV=2
          Length = 882

 Score = 73.6 bits (179), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 18/116 (15%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 137 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 192

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN----------GYMKQQLR 134
           ++    +  N  L A N+ L  +N RLQ  +  +VC N           Y +QQLR
Sbjct: 193 QD----RADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLR 244



 Score = 36.2 bits (82), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 66/166 (39%), Gaps = 21/166 (12%)

Query: 206 QSCSGVAARACG-----LVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPA-G 252
           Q   G  ARA G     +V +    + +   D   W           R++++     A G
Sbjct: 396 QGDGGAVARAEGTRDNAVVIMNSINLVDAFLDANKWMELFPSIVCKARTIQIINHGAASG 455

Query: 253 NAGTIELLYTQAYAP--TTLAPARDFWTLRYTT-TLDNGSLVVCERSLSGSGAGPNPASA 309
           + G+  LL  QA     + L  AR+    RY     D GS  + +    G   G   AS 
Sbjct: 456 HLGSGTLLLMQAEVQFLSPLVAAREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQAS- 514

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLY 355
              VR    PSGC+I+    G S +  V+H+ +     P  L+P++
Sbjct: 515 --VVRCRRRPSGCIIQDMPNGYSRVVWVEHMEMVGEEKP--LQPVF 556


>sp|Q336P2|ROC3_ORYSJ Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp.
           japonica GN=ROC3 PE=2 SV=1
          Length = 882

 Score = 73.6 bits (179), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 18/116 (15%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA Q++ +E ++ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 137 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 192

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN----------GYMKQQLR 134
           ++    +  N  L A N+ L  +N RLQ  +  +VC N           Y +QQLR
Sbjct: 193 QD----RADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLR 244



 Score = 36.2 bits (82), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 66/166 (39%), Gaps = 21/166 (12%)

Query: 206 QSCSGVAARACG-----LVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPA-G 252
           Q   G  ARA G     +V +    + +   D   W           R++++     A G
Sbjct: 396 QGDGGAVARAEGTRDNAVVIMNSINLVDAFLDANKWMELFPSIVCKARTIQIINHGAASG 455

Query: 253 NAGTIELLYTQAYAP--TTLAPARDFWTLRYTT-TLDNGSLVVCERSLSGSGAGPNPASA 309
           + G+  LL  QA     + L  AR+    RY     D GS  + +    G   G   AS 
Sbjct: 456 HLGSGTLLLMQAEVQFLSPLVAAREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQAS- 514

Query: 310 AQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLY 355
              VR    PSGC+I+    G S +  V+H+ +     P  L+P++
Sbjct: 515 --VVRCRRRPSGCIIQDMPNGYSRVVWVEHMEMVGEEKP--LQPVF 556


>sp|Q8RWU4|ATML1_ARATH Homeobox-leucine zipper protein MERISTEM L1 OS=Arabidopsis thaliana
           GN=ATML1 PE=2 SV=1
          Length = 762

 Score = 72.4 bits (176), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 112/506 (22%), Positives = 196/506 (38%), Gaps = 103/506 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   W            +LEV +   AGN  G ++++  +
Sbjct: 316 ASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLSTGVAGNYNGALQVMTAE 375

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G   V + SL      P         R+   PSGCL
Sbjct: 376 FQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSP-------ITRSRRRPSGCL 428

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGE---------- 373
           I+    G S +  V+H+ ++  SV  + +PL  +      +  +A    +          
Sbjct: 429 IQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMAS 488

Query: 374 --------VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
                   V+     + ++L+  ++R+   F   V       W+ ++  G++DV   V +
Sbjct: 489 NIPACDLSVITSPEGRKSMLK-LAERMVMSFCTGVGASTAHAWTTLSTTGSDDV--RVMT 545

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYSA 483
            KS+     P        GI+ + A+     V P  +  FLR+   RSEW     D  S 
Sbjct: 546 RKSMDDPGRPP-------GIVLSAATSFWIPVAPKRVFDFLRDENSRSEW-----DILSN 593

Query: 484 ASL-KAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
             L +  ++   G  P            G+++       ++R+   +  Q +  +     
Sbjct: 594 GGLVQEMAHIANGRDP------------GNSV------SLLRVNSGNSGQSNMLI----- 630

Query: 543 LLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP----LDSK 589
           L + C+    +A G  S +++AP+D +          PD   LLPSGF I+P        
Sbjct: 631 LQESCT----DASG--SYVIYAPVDIIAMNVVLSGGDPDYVALLPSGFAILPDGSARGGG 684

Query: 590 TPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVA 649
                            ++LEV   T    G         S+LT+AFQ   +S     ++
Sbjct: 685 GSANASAGAGVEGGGEGNNLEVVTTTGSCGG---------SLLTVAFQILVDSVPTAKLS 735

Query: 650 TMARQYVRSVIS-SVQRVAMAICPSG 674
             +   V S+I  +V+R+  A+   G
Sbjct: 736 LGSVATVNSLIKCTVERIKAALACDG 761



 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE  + ECP P   +R++L RE     ++EP Q+K WFQN+R + K +
Sbjct: 65  RYHRHTQRQIQELESFFKECPHPDDKQRKELSREL----SLEPLQVKFWFQNKRTQMKAQ 120

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            E       N+ L + N  L  EN+R +  +S   C N
Sbjct: 121 HERHE----NQILKSENDKLRAENNRYKDALSNATCPN 154


>sp|Q5ZAY0|TF1_ORYSJ Homeobox-leucine zipper protein TF1 OS=Oryza sativa subsp. japonica
           GN=TF1 PE=2 SV=1
          Length = 709

 Score = 70.5 bits (171), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 110/516 (21%), Positives = 198/516 (38%), Gaps = 95/516 (18%)

Query: 19  SINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 78
           S N ++    +  R T +Q E LE  +S C  P   +++ L       + +   Q+K WF
Sbjct: 59  SSNTNEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSET----TGLGLDQVKFWF 114

Query: 79  QNRRCREKQR--KEASRLQTVNRKLTAMNKLLMEENDR---------------------L 115
           QN+R + K    KE       N KL+  N++L +EN R                     L
Sbjct: 115 QNKRTQVKTMCWKEE------NYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQL 168

Query: 116 QKQVSQLVCENGYMKQQLRTAPATTDAS--CDSVVTTPQHSLRDANNPAGLLSIAEETLA 173
             ++ +L+ ++ +++Q++  +  T  A+     + ++  +     ++   +  +A+  + 
Sbjct: 169 AVEMERLMGQSEWLQQEIARSNGTPPAANLAFQLNSSADYVFSGQHDQQMIAELAKNAMH 228

Query: 174 EFLSKATGTAVDWVQMPGMK-------------PGPDSVGIFAISQSCSGVAARACGLVS 220
             +  A      W  +PG               PG +S             A RA  +V 
Sbjct: 229 ALIILAESHVALWFPVPGCSYEVLNKMAYDQAYPGDNSANAIGFKTE----ATRAVSMVM 284

Query: 221 LEPTKIAEILKD-------RPSWFRDCRSLEVFTMFPA--GNAGTIELLYTQAYAPTTLA 271
           ++   + + L D        P       +  ++T +P   G  G I+L+  +   P+ L 
Sbjct: 285 MDYKSVVDFLMDPYNYRTFFPEVISGAVTNRIYT-WPTSDGYNGVIQLMTVEMMFPSPLV 343

Query: 272 PARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGG 331
           PAR    LRY   L+ G +VV + SL            + F +   +PSG LI+      
Sbjct: 344 PARKCTFLRYCNVLNEGLVVVIDVSLD---------DGSIFSKCRKMPSGFLIQSIRPNS 394

Query: 332 SIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQR--MTIAETSGEV--VYGLGRQPAVLRT 387
             +  ++H+  +   V E+ +P        A+R   T+A  S  +  V+     P V   
Sbjct: 395 CKVTAIEHVLADDTGVHELYQPCMNGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTK 454

Query: 388 FSQRLSRGFNDAVNGF-------NDDGWSLMTCDGAE-DVIIAVNSTKSLSTASNPTNSL 439
             + L +  +D +  F           W+++   G E D+ +A   T   S++ N     
Sbjct: 455 GRKNLMKLADDLLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRRTTEGSSSYN----- 509

Query: 440 AFLGGILCAKASMLLQNVPPALLVRFLRE--HRSEW 473
                IL   AS+ L  +P       LR   HR +W
Sbjct: 510 ----AILSVTASLRLP-LPMRKTFDLLRNLTHRCKW 540


>sp|Q9FFI0|HDG9_ARATH Homeobox-leucine zipper protein HDG9 OS=Arabidopsis thaliana
           GN=HDG9 PE=2 SV=1
          Length = 718

 Score = 70.1 bits (170), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 8/124 (6%)

Query: 1   MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI 60
           M          +RE+   +   ++ +   Y R+T EQ+  LE  + ECP P   +R+ L 
Sbjct: 1   MDFTRDDNSSDERENDVDANTNNRHEKKGYHRHTNEQIHRLETYFKECPHPDEFQRRLLG 60

Query: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS 120
            E     N++PKQIK WFQN+R + K   E +     N  L A N  +  EN+ ++  ++
Sbjct: 61  EEL----NLKPKQIKFWFQNKRTQAKSHNEKAD----NAALRAENIKIRRENESMEDALN 112

Query: 121 QLVC 124
            +VC
Sbjct: 113 NVVC 116


>sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp.
           japonica GN=ROC8 PE=2 SV=2
          Length = 710

 Score = 68.9 bits (167), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 17/128 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K +
Sbjct: 18  RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENGYMKQQLRTAPAT 139
            E    +  N  L A N  +  EN  +++ +  ++C         E+ + +Q+LR   A 
Sbjct: 74  HE----RADNCFLRAENDKIRCENIAIREALKNVICPTCGGPPVGEDYFDEQKLRMENAR 129

Query: 140 TDASCDSV 147
                D V
Sbjct: 130 LKEELDRV 137



 Score = 49.3 bits (116), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 114/291 (39%), Gaps = 46/291 (15%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGNAGTIELLYTQA 264
            +R  GLV +    +A++  D   W            +++V      G + ++ L+Y + 
Sbjct: 268 GSRESGLVLMSAVALADVFMDTNKWMEFFPSIVSKAHTIDVLVNGMGGRSESLILMYEEL 327

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS----GSGAGPNPASAAQFVRAEMLPS 320
           +  T   P R+   +RY   ++ G   + + S+          P P       R+  LPS
Sbjct: 328 HIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGAPPP-------RSRRLPS 380

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVL-RPLYESSKVVAQRMTIA-------ETSG 372
           GCLI     G S +  V+H+ +E  S   VL R L  S         +A         + 
Sbjct: 381 GCLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYAS 440

Query: 373 EVVYGL-----GRQPAVLRT---FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
            V  G+     G  P   R+    SQR+   F  ++       W+  T  G+ +V + V 
Sbjct: 441 LVALGVPHHIAGVTPEGKRSMMKLSQRMVNSFCSSLGASQMHQWT--TLSGSNEVSVRVT 498

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
             +S    ++P        G++ + A+ +   VP   +  F+R+   RS+W
Sbjct: 499 MHRS----TDPGQP----NGVVLSAATSIWLPVPCDHVFAFVRDENTRSQW 541


>sp|Q0J9X2|ROC2_ORYSJ Homeobox-leucine zipper protein ROC2 OS=Oryza sativa subsp.
           japonica GN=ROC2 PE=2 SV=1
          Length = 784

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 14/101 (13%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 162

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
            +R E S+L++ N KL A       EN R ++ +S   C N
Sbjct: 163 HERHENSQLRSDNEKLRA-------ENMRYKEALSSASCPN 196



 Score = 65.1 bits (157), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 116/291 (39%), Gaps = 47/291 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW---FRDCRS----LEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    + EIL D   +   F +  S    LEV +   AGN  G ++++  +
Sbjct: 355 ASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVE 414

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ + +RY     +G+  V + SL      P        ++    PSGCL
Sbjct: 415 FQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP-------VLKCRRRPSGCL 467

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETS------------ 371
           I+    G S +  V+H+ ++  SV  + + L  S      R  +                
Sbjct: 468 IQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMAS 527

Query: 372 -------GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
                  G +    GR+   +   ++R+   F   V       W+ ++  GAEDV   V 
Sbjct: 528 NIPTSDIGVITSSEGRKS--MLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDV--RVM 583

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           + KS+     P        GI+   A+     VPP  +  FLR+   RSEW
Sbjct: 584 TRKSVDDPGRPP-------GIVLNAATSFWLPVPPKRVFDFLRDESSRSEW 627


>sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2 OS=Arabidopsis thaliana
           GN=HDG2 PE=2 SV=1
          Length = 721

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 10/118 (8%)

Query: 11  QQRESSSGSINK--HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSN 68
           + +E  SG+     H     +Y R+T  Q++ +E  + ECP P   +R+QL RE     N
Sbjct: 47  ENQEGGSGNDQDPLHPNKKKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSREL----N 102

Query: 69  IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
           +EP Q+K WFQN+R + K   E       N  L A N+ L  +N R ++ ++   C N
Sbjct: 103 LEPLQVKFWFQNKRTQMKNHHERHE----NSHLRAENEKLRNDNLRYREALANASCPN 156



 Score = 65.5 bits (158), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 160/415 (38%), Gaps = 95/415 (22%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFTMFPAGN-AGTIELLYTQ 263
           A+R   +V +    I EIL D   W            +L V +   AGN  G ++++  +
Sbjct: 300 ASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQVMSAE 359

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
              P+ L P R+ +  RY     +GS  V + SL      PNP +     R     SGCL
Sbjct: 360 FQVPSPLVPTRETYFARYCKQQGDGSWAVVDISL--DSLQPNPPA-----RCRRRASGCL 412

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV----------------VAQRMTI 367
           I+    G S +  V+H+ ++   V  + + +  +                   +A  M  
Sbjct: 413 IQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMAT 472

Query: 368 AETSGEV---VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
             +SGEV       GR+   +   ++R+   F   V+      W+ ++  GAEDV   V 
Sbjct: 473 NISSGEVGVITNQEGRRS--MLKLAERMVISFCAGVSASTAHTWTTLSGTGAEDV--RVM 528

Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEWADFNVDAYS 482
           + KS+     P        GI+ + A+     VPP  +  FLR+   R+EW         
Sbjct: 529 TRKSVDDPGRPP-------GIVLSAATSFWIPVPPKRVFDFLRDENSRNEW--------- 572

Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEEL---LEVIRLEGHSLAQEDAFVSR 539
                              +   ++  + H     +    + ++R+   + +Q +  +  
Sbjct: 573 ----------------DILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLI-- 614

Query: 540 DIHLLQICSGVDENAVGACSELVFAPIDEMF---------PDDGPLLPSGFRIIP 585
              L + C+  D  A    S +++AP+D +          PD   LLPSGF I+P
Sbjct: 615 ---LQESCT--DPTA----SFVIYAPVDIVAMNIVLNGGDPDYVALLPSGFAILP 660


>sp|Q9FX31|HDG11_ARATH Homeobox-leucine zipper protein HDG11 OS=Arabidopsis thaliana
           GN=HDG11 PE=1 SV=1
          Length = 722

 Score = 68.2 bits (165), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 22/108 (20%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+TA+Q++ LE  + ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 35  RYHRHTAQQIQRLESSFKECPHPDEKQRNQLSREL----GLAPRQIKFWFQNRRTQLKAQ 90

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA 136
            E            A N  L  END+++       CEN  +++ L+ A
Sbjct: 91  HE-----------RADNSALKAENDKIR-------CENIAIREALKHA 120



 Score = 48.1 bits (113), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 118/294 (40%), Gaps = 55/294 (18%)

Query: 212 AARACGLVSLEPTKIAEILKD-------RPSWFRDCRSLEVFTMFPAG-NAGTIELLYTQ 263
           A+R+ G+V +    + ++  D        PS     ++L V +    G + G + LLY +
Sbjct: 291 ASRSSGIVFMNAMALVDMFMDCVKWTELFPSIIAASKTLAVISSGMGGTHEGALHLLYEE 350

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCL 323
               + L   R+F  LRY    + GS +V   S       P   S +Q  R    PSGCL
Sbjct: 351 MEVLSPLVATREFCELRYCQQTEQGSWIVVNVSYD----LPQFVSHSQSYR---FPSGCL 403

Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPA 383
           I+    G S +  V+H+  E     E++  LY   + +  R         + +G  R   
Sbjct: 404 IQDMPNGYSKVTWVEHIETEE---KELVHELY---REIIHR--------GIAFGADRWVT 449

Query: 384 VLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI-----------IAVN-STKSLST 431
            L+   +R +   +   +   D G  +++ +G   ++           ++V+ S  + ST
Sbjct: 450 TLQRMCERFA-SLSVPASSSRDLGGVILSPEGKRSMMRLAQRMISNYCLSVSRSNNTRST 508

Query: 432 ASNPTNSLAFL----------GGILCAKASMLLQNVPPALLVRFLREHRS--EW 473
             +  N +             G +LCA  +  L N P  +   FL++ R+  +W
Sbjct: 509 VVSELNEVGIRVTAHKSPEPNGTVLCAATTFWLPNSPQNVF-NFLKDERTRPQW 561


>sp|Q7Y0V7|ROC6_ORYSJ Homeobox-leucine zipper protein ROC6 OS=Oryza sativa subsp.
           japonica GN=ROC6 PE=2 SV=2
          Length = 872

 Score = 67.4 bits (163), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 8/86 (9%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 87
           +Y R+T +Q++ LE V+ ECP P   +R +L R      N+E +Q+K WFQNRR + KQ 
Sbjct: 125 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKQT 180

Query: 88  ---RKEASRLQTVNRKLTAMNKLLME 110
              R E + L+  N KL A N  + E
Sbjct: 181 QIERHENALLRQENDKLRAENMTIRE 206



 Score = 38.9 bits (89), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/177 (20%), Positives = 73/177 (41%), Gaps = 12/177 (6%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSW--------FRDCRSLEVFTMFPAGNAGTIELLYTQ 263
           A R  G+  +    + + L D P W         R   +  + +      +G+I+L++ +
Sbjct: 404 ATRESGIAIISSVDLVDSLMDAPRWSEMFPCVVARASTTDIISSGMGGTRSGSIQLMHAE 463

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNG----SLVVCERSLSGSGAGPNPASAAQFVRAEMLP 319
               + L P R+   LR+      G      V  +  L     G   +S++ ++   +LP
Sbjct: 464 LQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGGGGSSSSSYMGCRLLP 523

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVY 376
           +GC+++  + G S +  V H   +  +  ++ RPL  S + +  R  +A    +  Y
Sbjct: 524 TGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGARRWLASLQRQCQY 580


>sp|Q7Y0V9|ROC4_ORYSJ Homeobox-leucine zipper protein ROC4 OS=Oryza sativa subsp.
           japonica GN=ROC4 PE=2 SV=2
          Length = 813

 Score = 65.1 bits (157), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 14/99 (14%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K  
Sbjct: 107 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 162

Query: 87  -QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
            +R E S L+  N KL +       EN  +++  S  VC
Sbjct: 163 LERHENSLLKQENDKLRS-------ENLSIREATSNAVC 194



 Score = 39.7 bits (91), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 91/230 (39%), Gaps = 37/230 (16%)

Query: 270 LAPARDFWTLRYTTTLDNGSLVVCERSLSG--SGAGPNPASAAQFVRAEMLPSGCLIRPC 327
           L P R+   LR++  L +G   V + S        G   AS+   +    LPSGC+++  
Sbjct: 448 LVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRLPSGCVLQDT 507

Query: 328 DGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVA--------QR-----------MTIA 368
             G   +  V+H   +  SV  + RPL  S   +         QR           + + 
Sbjct: 508 PNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLALLMSSIALP 567

Query: 369 ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSL---MTCDGAEDVIIAVNS 425
           E     ++  G++   +   ++R++  F   V+  +   WS    +T +  EDV   V +
Sbjct: 568 ENDSSAIHPEGKRS--MLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIGEDV--HVMA 623

Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
            KS+     P        G++ + A+ +   V P  L  FL     R+EW
Sbjct: 624 RKSVDEPGTPP-------GVVLSAATSVWMPVMPERLFNFLHNKGLRAEW 666


>sp|Q6YWR4|HOX16_ORYSJ Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp.
           japonica GN=HOX16 PE=2 SV=1
          Length = 343

 Score = 64.7 bits (156), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 14/126 (11%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 132

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
              ++  RL+     L A +  L+++N RL  QV  L        ++L+    TT+ S  
Sbjct: 133 QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLT-------EKLQEKETTTEGSAG 185

Query: 146 SVVTTP 151
           + V  P
Sbjct: 186 AAVDVP 191


>sp|A2X980|HOX16_ORYSI Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica
           GN=HOX16 PE=2 SV=1
          Length = 345

 Score = 64.7 bits (156), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 14/126 (11%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R T EQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 79  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 134

Query: 89  ---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCD 145
              ++  RL+     L A +  L+++N RL  QV  L        ++L+    TT+ S  
Sbjct: 135 QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLT-------EKLQEKETTTEGSAG 187

Query: 146 SVVTTP 151
           + V  P
Sbjct: 188 AAVDVP 193


>sp|Q9M9P4|HDG8_ARATH Homeobox-leucine zipper protein HDG8 OS=Arabidopsis thaliana
           GN=HDG8 PE=2 SV=2
          Length = 699

 Score = 64.7 bits (156), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 21/121 (17%)

Query: 27  NGKYV--RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
           NGK    R+T +Q++ LE  + ECP P   +R QL RE      +EP QIK WFQN+R +
Sbjct: 22  NGKRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCREL----KLEPDQIKFWFQNKRTQ 77

Query: 85  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC-----------ENGYMKQQL 133
            K +++ S     N  L   N+ L  +N+ +   +  ++C           E G+  Q+L
Sbjct: 78  SKTQEDRS----TNVLLRGENETLQSDNEAMLDALKSVLCPACGGPPFGREERGHNLQKL 133

Query: 134 R 134
           R
Sbjct: 134 R 134



 Score = 41.6 bits (96), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 14/143 (9%)

Query: 205 SQSCSGVAARACGLVS--LEPTKIAEILKDRPSWFRDCRSLEVF-TMFPA-GNAGTIELL 260
           S++ + V   A  L+   L+P K  E+    P+      ++ V  +  P  GN   ++++
Sbjct: 269 SKAVTVVHVEAINLIQMFLDPEKWKELF---PTIVNKANTIHVLGSGLPIRGNCNVLQVM 325

Query: 261 YTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPS 320
           + Q +  + L PAR+F  +R    ++ G  ++ + S     A  +  +AA + R    PS
Sbjct: 326 WEQLHILSPLVPAREFMVVRCCQEIEKGIWIIADVS---HRANFDFGNAACYKR----PS 378

Query: 321 GCLIRPCDGGGSIIHIVDHLNLE 343
           GCLI+      S +  ++H+ ++
Sbjct: 379 GCLIQALPDAHSKVMWIEHVEVD 401


>sp|Q9LMT8|HDG12_ARATH Homeobox-leucine zipper protein HDG12 OS=Arabidopsis thaliana
           GN=HDG12 PE=2 SV=1
          Length = 687

 Score = 64.3 bits (155), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 24/133 (18%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           ++ R+T  Q++ LE  ++EC  P   +R QL RE      + P+QIK WFQNRR ++K +
Sbjct: 24  RFHRHTPHQIQRLESTFNECQHPDEKQRNQLSREL----GLAPRQIKFWFQNRRTQKKAQ 79

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTA--PATTDASCDS 146
            E            A N  L EEND+++       CEN  +++ ++ A  P+  D+  + 
Sbjct: 80  HER-----------ADNCALKEENDKIR-------CENIAIREAIKHAICPSCGDSPVNE 121

Query: 147 VVTTPQHSLRDAN 159
                +  LR  N
Sbjct: 122 DSYFDEQKLRIEN 134



 Score = 45.1 bits (105), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/298 (20%), Positives = 116/298 (38%), Gaps = 62/298 (20%)

Query: 212 AARACGLVSLEPTKIAEILKDR-------PSWFRDCRSLEVFTMFPAGNAG-TIELLYTQ 263
           A+R+ G+V      + ++L +        PS     ++L V +    GN G  + L+  +
Sbjct: 271 ASRSSGVVFTNAITLVDMLMNSVKLTELFPSIVASSKTLAVISSGLRGNHGDALHLMIEE 330

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFV---RAEMLPS 320
               + L   R+F  LRY   +++G+  +   S              QF+   R+   PS
Sbjct: 331 LQVLSPLVTTREFCVLRYCQQIEHGTWAIVNVSYE----------FPQFISQSRSYRFPS 380

Query: 321 GCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGR 380
           GCLI+    G S +  V+H   E         P++E  K +  +         + +G  R
Sbjct: 381 GCLIQDMSNGYSKVTWVEHGEFEEQ------EPIHEMFKDIVHK--------GLAFGAER 426

Query: 381 QPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI-----IAVNSTKSLSTASNP 435
             A L+   +R +     A +   D G  + + +G   ++     +  N   S+ T++N 
Sbjct: 427 WIATLQRMCERFTNLLEPATSSL-DLGGVIPSPEGKRSIMRLAHRMVSNFCLSVGTSNNT 485

Query: 436 TNSLAF------------------LGGILCAKASMLLQNVPPALLVRFLREHRS--EW 473
            +++                     G +LCA  S  L  + P  +  FL++ R+  +W
Sbjct: 486 RSTVVSGLDEFGIRVTSHKSRHEPNGMVLCAATSFWLP-ISPQNVFNFLKDERTRPQW 542


>sp|Q6ZA74|HOX5_ORYSJ Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp.
           japonica GN=HOX5 PE=1 SV=1
          Length = 349

 Score = 63.9 bits (154), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R TAEQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 86  KKRRLTAEQVQMLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 141

Query: 89  K---EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
           +   +  RL+     L A +  L+ +NDRL+ QV  L 
Sbjct: 142 QLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLT 179


>sp|Q9XH36|HOX5_ORYSI Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica
           GN=HOX5 PE=1 SV=1
          Length = 350

 Score = 63.9 bits (154), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R TAEQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 86  KKRRLTAEQVQMLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 141

Query: 89  K---EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 123
           +   +  RL+     L A +  L+ +NDRL+ QV  L 
Sbjct: 142 QLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLT 179


>sp|Q9M2E8|HDG1_ARATH Homeobox-leucine zipper protein HDG1 OS=Arabidopsis thaliana
           GN=HDG1 PE=2 SV=1
          Length = 808

 Score = 62.0 bits (149), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE V+ EC  P   +R  L R      N++P+Q+K WFQNRR + K  
Sbjct: 113 RYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRL----NLDPRQVKFWFQNRRTQMKTQ 168

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 169 IERHENALLRQENDKLRAENMSVRE 193



 Score = 43.9 bits (102), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/289 (20%), Positives = 111/289 (38%), Gaps = 43/289 (14%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSL-------EVFTMFPAGNAGTIELLYTQA 264
           A++  G V +    + E L D   W     S+       E+ +    G  G + L++ + 
Sbjct: 374 ASKEAGTVIINSLALVETLMDSERWAEMFPSMVSRTSTTEIISSGMGGRNGALHLMHAEL 433

Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLI 324
              + L P R    LR+      G   V + S+     G + +          LPSGCL+
Sbjct: 434 QLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS-------CRRLPSGCLV 486

Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPL------YESSKVVA--QRM----------T 366
           +    G S +  ++H   +   +  + RPL      + + + +A  QR           T
Sbjct: 487 QDMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILMSST 546

Query: 367 IAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNST 426
           ++ ++         + ++L+  ++R++  F   V   +   WS +   G  D  + + + 
Sbjct: 547 VSTSTNPSPINCNGRKSMLK-LAKRMTDNFCGGVCASSLQKWSKLNV-GNVDEDVRIMTR 604

Query: 427 KSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           KS++    P        GI+   A+ +   V P  L  FL     RSEW
Sbjct: 605 KSVNNPGEPP-------GIILNAATSVWMPVSPRRLFDFLGNERLRSEW 646


>sp|Q0WV12|ANL2_ARATH Homeobox-leucine zipper protein ANTHOCYANINLESS 2 OS=Arabidopsis
           thaliana GN=ANL2 PE=2 SV=1
          Length = 802

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 40/172 (23%)

Query: 4   VIQQQQQQQRESSSGSINKHQLD------------NGKYVRYTAEQVEALERVYSECPKP 51
           V ++ ++++ ES SGS N   +               +Y R+T +Q++ LE ++ ECP P
Sbjct: 100 VNRRSREEEHESRSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHP 159

Query: 52  SSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLME 110
              +R +L  R C     +E +Q+K WFQNRR + K + E              N LL +
Sbjct: 160 DEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKTQLERHE-----------NALLRQ 203

Query: 111 ENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSV---VTTPQHSLRDAN 159
           END+L+        EN  +++ +R  P  T+    ++   V+  +H LR  N
Sbjct: 204 ENDKLR-------AENMSIREAMRN-PICTNCGGPAMLGDVSLEEHHLRIEN 247



 Score = 48.5 bits (114), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 116/293 (39%), Gaps = 49/293 (16%)

Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR--DCRSLEVFT--MFPAGNAGTI----ELLYTQ 263
           A+R  G+V +    + E L D   W     C      T  +   G AGTI    +L+  +
Sbjct: 376 ASRTSGMVIINSLALVETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAE 435

Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLS----GSGAGPNPASAAQFVRAEMLP 319
               + L P R+   LR+      G   V + S+      SG  P        +R   LP
Sbjct: 436 LQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSGGAP-------VIRR--LP 486

Query: 320 SGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS----------------KVVAQ 363
           SGC+++    G S +  V+H   +   + ++ RPL  S                 + +A 
Sbjct: 487 SGCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAI 546

Query: 364 RMTIAETSGE-VVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
            ++ + TS +      G + ++L+  +QR++  F   ++  +   WS +T  G  D  + 
Sbjct: 547 LISSSVTSHDNTSITPGGRKSMLK-LAQRMTFNFCSGISAPSVHNWSKLTV-GNVDPDVR 604

Query: 423 VNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
           V + KS+     P        GI+ + A+ +     P  L  FLR    R EW
Sbjct: 605 VMTRKSVDDPGEPP-------GIVLSAATSVWLPAAPQRLYDFLRNERMRCEW 650


>sp|Q6EPF0|ROC5_ORYSJ Homeobox-leucine zipper protein ROC5 OS=Oryza sativa subsp.
           japonica GN=ROC5 PE=2 SV=1
          Length = 804

 Score = 60.8 bits (146), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
           +Y R+T +Q++ LE ++ ECP P   +R +L R      +++ +Q+K WFQNRR + K  
Sbjct: 101 RYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL----SLDARQVKFWFQNRRTQMKTQ 156

Query: 87  -QRKEASRLQTVNRKLTAMNKLLME 110
            +R E + L+  N KL A N  + E
Sbjct: 157 LERHENALLKQENDKLRAENMTIRE 181



 Score = 55.8 bits (133), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 117/301 (38%), Gaps = 54/301 (17%)

Query: 212 AARACGLVSLEPT-KIAEILKDRPSWFRDCRSL--------EVFTMFPAGNAGTIELLYT 262
           A+R  GLV ++ +  + E L D   W      +        EV T       G + L+  
Sbjct: 371 ASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNGALLLMKA 430

Query: 263 QAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSG------SGAGPNPASAAQFVRAE 316
           +    + L P R+   LR+   L  G+  V + S+ G      SG  P   +    V+  
Sbjct: 431 ELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGN----VKCR 486

Query: 317 MLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQR------------ 364
            +PSGC+++    G   +  V+H   +  SV ++ RPL  S      R            
Sbjct: 487 RVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCEC 546

Query: 365 -------MTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAE 417
                   T+       +   G++   +   ++R++  F   V+  +   WS +  DGA 
Sbjct: 547 LAILMSSATVTANDSTAISQEGKRS--MLKLARRMTENFCAGVSASSAREWSKL--DGAT 602

Query: 418 DVI---IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSE 472
             I   + V + KS+S    P        G++ + A+ +   V P  L  FLR+   R+E
Sbjct: 603 GSIGEDVRVMARKSVSEPGEPP-------GVVLSAATSVWVPVAPEKLFNFLRDEQLRAE 655

Query: 473 W 473
           W
Sbjct: 656 W 656


>sp|Q9FJS2|HDG5_ARATH Homeobox-leucine zipper protein HDG5 OS=Arabidopsis thaliana
           GN=HDG5 PE=2 SV=3
          Length = 826

 Score = 57.4 bits (137), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 8/96 (8%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           +Y R+T  Q++ +E ++ E P P   +R++L  E      ++P+Q+K WFQNRR + K +
Sbjct: 114 RYHRHTNRQIQEMEALFKENPHPDDKQRKRLSAEL----GLKPRQVKFWFQNRRTQMKAQ 169

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
           ++ +     N  L A N  L  EN  LQ ++  L C
Sbjct: 170 QDRNE----NVMLRAENDNLKSENCHLQAELRCLSC 201



 Score = 33.1 bits (74), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 85/215 (39%), Gaps = 32/215 (14%)

Query: 259 LLYTQAYAPTTLAPARDFWTLRYTT-TLDNGSLVVCERSLSGSGAGPNPASAA--QFVRA 315
           L++ +    + L P R+ + LRY     + G+  + +  +        P +    ++ R 
Sbjct: 438 LMFAELQVLSPLVPTREAYFLRYVEQNAETGNWAIVDFPIDSFHDQMQPMNTITHEYKRK 497

Query: 316 EMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV--------VAQRMT- 366
              PSGC+I+    G S +  V+H+ ++   V E      +S           V QR   
Sbjct: 498 ---PSGCIIQDMPNGYSQVKWVEHVEVDEKHVHETFAEYVKSGMAFGANRWLDVLQRQCE 554

Query: 367 -IAETSGEVVYGLG------RQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
            IA      +  LG       +  ++R  SQRL + F   ++      W+ ++    + V
Sbjct: 555 RIASLMARNITDLGVISSAEARRNIMR-LSQRLVKTFCVNISTAYGQSWTALSETTKDTV 613

Query: 420 IIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLL 454
            I   +T+ +     PT      G +LCA ++  L
Sbjct: 614 RI---TTRKMCEPGQPT------GVVLCAVSTTWL 639


>sp|Q5JMF3|ROC9_ORYSJ Homeobox-leucine zipper protein ROC9 OS=Oryza sativa subsp.
           japonica GN=ROC9 PE=2 SV=1
          Length = 816

 Score = 57.0 bits (136), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 119/310 (38%), Gaps = 45/310 (14%)

Query: 155 LRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD------SVGIFAISQSC 208
           LR  ++   +L +A   L E +   +     WV+  G++ G D       V +F      
Sbjct: 300 LRHDDDKPRILELATRALDELVGMCSSGEPVWVR--GVETGRDILNYDEYVRLFRRDHGG 357

Query: 209 SG--------VAARACGLVSLEPTKIAEILKDRPSW-------FRDCRSLEVFT-MFPAG 252
           SG         A+R CGLV L+   +     D   W            +LE+ +     G
Sbjct: 358 SGDQMAGWTVEASRECGLVYLDTMHLVHTFMDVDKWKDLFPTMISKAATLEMISNREDDG 417

Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQF 312
             G ++L+Y +    T + P R+ +  RY   L      + + S   S  G + +SA   
Sbjct: 418 RDGVLQLMYAELQTLTPMVPTRELYFARYCKKLAAERWAIVDVSFDESETGVHASSA--- 474

Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSG 372
           VR    PSGCLI   + G   +  V+H      +V     PLY            A T+ 
Sbjct: 475 VRCWKNPSGCLIEEQNNGRCKMTWVEHTRCRRCTVA----PLYR-----------AVTAS 519

Query: 373 EVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI-IAVNSTKSLST 431
            V +G  R  A L+   +R+   F  A N    D   + T  G   V+ +A   T SL  
Sbjct: 520 GVAFGARRWVAALQLQCERMV--FAVATNVPTRDSTGVSTLAGRRSVLKLAHRMTSSLCR 577

Query: 432 ASNPTNSLAF 441
            +  +  +A+
Sbjct: 578 TTGGSCDMAW 587



 Score = 52.8 bits (125), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 30  YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 86
           Y R+TAEQ+  +E ++ E P P   +RQQ+ ++      +  +Q+K WFQNRR + K   
Sbjct: 99  YHRHTAEQIRIMEALFKESPHPDERQRQQVSKQL----GLSARQVKFWFQNRRTQIKAVQ 154

Query: 87  QRKEASRLQTVNRKLTAMNKLLME 110
           +R E S L++   KL   ++ + E
Sbjct: 155 ERHENSLLKSELEKLQDEHRAMRE 178


>sp|Q10QP3|HOX13_ORYSJ Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp.
           japonica GN=HOX13 PE=2 SV=1
          Length = 311

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV ALER +    K    R+ ++ R+      ++P+Q+ VWFQNRR R K +
Sbjct: 72  KKRRLALEQVRALERSFDTDNKLDPDRKARIARDL----GLQPRQVAVWFQNRRARWKTK 127

Query: 89  KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDAS 143
           +    L+     L A +  L  + D L++    L  E   ++++L T PA T AS
Sbjct: 128 Q----LERDFAALRARHDALRADCDALRRDKDALAAEIRELREKLPTKPADTAAS 178


>sp|O23208|ATB40_ARATH Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana
           GN=ATHB-40 PE=2 SV=3
          Length = 216

 Score = 55.8 bits (133), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 17/132 (12%)

Query: 7   QQQQQQRESSSGSINKHQLDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECP 64
           +Q +++R+ + GS+      NG + +   T EQV  LE  + +  K  S R+ +L  E  
Sbjct: 31  KQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAEL- 89

Query: 65  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
               ++P+Q+ VWFQNRR R K +    RL+    KL   +  ++ +  RL+ +V QL  
Sbjct: 90  ---GLDPRQVAVWFQNRRARWKNK----RLEEEYNKLKNSHDNVVVDKCRLESEVIQL-- 140

Query: 125 ENGYMKQQLRTA 136
                K+QL  A
Sbjct: 141 -----KEQLYDA 147


>sp|A2XDD6|HOX13_ORYSI Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. indica
           GN=HOX13 PE=2 SV=2
          Length = 312

 Score = 55.1 bits (131), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 15/119 (12%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV ALER +    K    R+ ++ R+      ++P+Q+ VWFQNRR R K +
Sbjct: 72  KKRRLALEQVRALERSFDTDNKLDPDRKARIARDL----GLQPRQVAVWFQNRRARWKTK 127

Query: 89  KEASRLQTVNRKLTAM----NKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDAS 143
           +       + R   A+    N  L  + D L++    L  E   ++++L T PA T AS
Sbjct: 128 Q-------LERDFAALRAQHNDALRADCDALRRDKDALAAEIRELREKLPTKPADTAAS 179


>sp|A3BYC1|HOX25_ORYSJ Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp.
           japonica GN=HOX25 PE=2 SV=2
          Length = 320

 Score = 55.1 bits (131), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 8/92 (8%)

Query: 32  RYTAEQVEALERVYSECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK- 89
           R TAEQV ALER + E   K    R+ +L R       I P+Q+ VWFQNRR R K ++ 
Sbjct: 85  RLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWKTKQL 140

Query: 90  --EASRLQTVNRKLTAMNKLLMEENDRLQKQV 119
             +  RL+  + +L A    L  +N+ L+ QV
Sbjct: 141 ELDFDRLRAAHDELLAGRTALAADNESLRSQV 172


>sp|Q8S7W9|HOX21_ORYSJ Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp.
           japonica GN=HOX21 PE=2 SV=1
          Length = 366

 Score = 53.9 bits (128), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 9/119 (7%)

Query: 29  KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 130 KKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRRARWKTK 185

Query: 89  KEASRLQTVNRKLTAM---NKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASC 144
           +       + R+L A+   N  L+  N +LQ ++  L         +L      T+ASC
Sbjct: 186 QLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREA--ASELINLNKETEASC 242


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.132    0.391 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 272,828,370
Number of Sequences: 539616
Number of extensions: 11544697
Number of successful extensions: 36229
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 699
Number of HSP's that attempted gapping in prelim test: 35204
Number of HSP's gapped (non-prelim): 1266
length of query: 745
length of database: 191,569,459
effective HSP length: 125
effective length of query: 620
effective length of database: 124,117,459
effective search space: 76952824580
effective search space used: 76952824580
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)