Citrus Sinensis ID: 004544

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-----

MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQFHQR

ccccccHHHHHcccccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHcccccccccccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccEEEECcccccccHHHHHHHHHccccccccccEEEEEEEEEEcccccEEEEEEEccccccccccccccccccEECcccccEEEEcccccEEEEEEEEccccccccccHHHHHHHcHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEECccccccccccccccccccEEEEEEccccccccHHHHHHHHHHcccHHHHccccccccccccccccccccccccccccccEEEEcccccccccEEEEEEEccccccccccccHHHHHHHHHHccccccccccccEEEEccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHccccEEEEEccccccccccc

****************************KYVRYTAEQVEALERVYSECPK*****RQQLIRECPILSNIEPKQIKVWFQNRR**************VNRKLTAMNKLLMEENDRLQK***QLVCENGYM**************C*SV*******LRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGA********QFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKS*******TNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIP*****************************************HTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPS****************ALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQFH**

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MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVxxxxxxxxxxxxxxxxxxxxxxxxxxxxNGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVLKNLWQHSDAILCCSLKVPLQFHQR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Homeobox-leucine zipper protein HOX9	Probable transcription factor.	confident	Q9AV49
Homeobox-leucine zipper protein REVOLUTA	Probable transcription factor involved in the regulation of interfascicular fiber (cortical cells) and secondary xylem differentiation in the inflorescence stems. Required for lateral shoot meristems (LSMs) and flower meristems (FMs) initiation. May be involved in the determination of vascular patterning and organ polarity.	confident	Q9SE43
Homeobox-leucine zipper protein HOX10	Probable transcription factor.	probable	A2XBL9

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2PSO, chain A
Confidence level:probable
Coverage over the Query: 166-365
View the alignment between query and template
View the model in PyMOL

Template: 1AU7, chain A
Confidence level:probable
Coverage over the Query: 7-15,32-89
View the alignment between query and template
View the model in PyMOL

Template: 1CI6, chain A
Confidence level:probable
Coverage over the Query: 79-134
View the alignment between query and template
View the model in PyMOL