BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004546
(745 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P52780|SYQ_LUPLU Glutamine--tRNA ligase OS=Lupinus luteus PE=2 SV=2
Length = 794
Score = 1145 bits (2961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/700 (78%), Positives = 619/700 (88%), Gaps = 13/700 (1%)
Query: 5 SKGDKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVA 64
+ DK + LELFLKIGLD+RTAKNT+ANNKVT NLT+VI++A VTDGC R +GNLLYTVA
Sbjct: 7 TSSDKEKSLELFLKIGLDERTAKNTVANNKVTTNLTSVINDAGVTDGCSRTVGNLLYTVA 66
Query: 65 TKYPTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVS 124
TKYP NAL HRPTLL YIV+SK+KT AQL+AA SF ++TGSEN ++++FEEACGVGVEVS
Sbjct: 67 TKYPANALPHRPTLLQYIVNSKVKTTAQLDAALSFLSATGSENLDLNKFEEACGVGVEVS 126
Query: 125 SEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLG 184
+EDI+ V+EV EENK TILELRYR NVG+L HVRKRLPWAD K+VKQL+DA++YE+LG
Sbjct: 127 TEDIKHAVDEVVEENKATILELRYRVNVGELLGHVRKRLPWADAKVVKQLVDAKLYEILG 186
Query: 185 ERTAAD---IEKLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEENY 241
+RTAAD +K +K K E K P +K EEDL P FP PE+N+
Sbjct: 187 DRTAADNEKPKKKKEKPAKVEDKAAPVATSEKPL---------EEDLNPYLIFPNPEDNF 237
Query: 242 KVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGL 301
KVHTE+PFSDG++L CCNTK +L+KHL+ TGG VLTRFPPEPNGYLHIGHAKAMFVDFGL
Sbjct: 238 KVHTEVPFSDGNILRCCNTKALLEKHLKATGGKVLTRFPPEPNGYLHIGHAKAMFVDFGL 297
Query: 302 AKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELI 361
AK+R G CYLR+DDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTS+YFQELYE AVELI
Sbjct: 298 AKDRNGGCYLRFDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSNYFQELYEFAVELI 357
Query: 362 RRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDM 421
RRGHAYVDHQT +EIKEYREKK+NSPWRDRPI+ESLKLFEDMR G IEEGKATLRMKQDM
Sbjct: 358 RRGHAYVDHQTADEIKEYREKKLNSPWRDRPISESLKLFEDMRRGFIEEGKATLRMKQDM 417
Query: 422 QNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRA 481
Q+DN+NMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIEN+THSLCTLEFETRRA
Sbjct: 418 QSDNYNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENVTHSLCTLEFETRRA 477
Query: 482 SYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRR 541
SY+WLLHALG+YQPYVWEYSRLNVSNTVMSKRKLN LVT K+VDGWDDP LMTLAGLRRR
Sbjct: 478 SYYWLLHALGIYQPYVWEYSRLNVSNTVMSKRKLNRLVTEKWVDGWDDPRLMTLAGLRRR 537
Query: 542 GVTSTSINAFVQGIGISRSD-SLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES 600
G+T T+INAFV+G+GI+RSD +LI ++RLEYH+REELNKTAPR MVVL+PLKVVITN+E+
Sbjct: 538 GMTPTAINAFVRGMGITRSDGTLISVERLEYHVREELNKTAPRAMVVLHPLKVVITNLEA 597
Query: 601 GTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYA 660
+ + +DAK+WPDAQADDASAFYK+PFSNVVYIE SDFRM+DSKDYYGLAPGKSV+LRYA
Sbjct: 598 KSAIEVDAKKWPDAQADDASAFYKIPFSNVVYIERSDFRMQDSKDYYGLAPGKSVILRYA 657
Query: 661 FPIKCTEVILSDDKETILHIRAEYDPSKKTKPKVFLSFIS 700
FPIKCTEVIL+DD ETIL IRAEYDPSKKTKPK L ++S
Sbjct: 658 FPIKCTEVILADDNETILEIRAEYDPSKKTKPKGVLHWVS 697
>sp|P14325|SYQ_DICDI Probable glutamine--tRNA ligase OS=Dictyostelium discoideum GN=glnS
PE=2 SV=2
Length = 779
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/700 (49%), Positives = 454/700 (64%), Gaps = 23/700 (3%)
Query: 8 DKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKY 67
+K E++ LF +IGLD AK T N +++NL +I EA GCE+ +G LLYT+ATKY
Sbjct: 8 NKDELVTLFSQIGLDSSKAKETTNNATLSSNLQEIIKEAGAESGCEKSVGLLLYTLATKY 67
Query: 68 PTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSED 127
P NA+ HR TL+ YI + K L+A + T +E V EFE++CGVGV ++ E
Sbjct: 68 PANAMKHRATLVDYIANKKSVNSINLQACLDYLRRTANEELNVAEFEQSCGVGVVITREQ 127
Query: 128 IELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERT 187
+ V++ +NK+ +LE RY+ N+G + ++ L WA+ K +K+ +DA + LLG +T
Sbjct: 128 VAQAVSDYINKNKSDLLEKRYQFNIGGILMEIKNSLKWANAKDIKEEVDAAILSLLGPKT 187
Query: 188 AADIEKLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEE-DLFPISNFPPPEENYKVHTE 246
AD K KP K DL PI P E E
Sbjct: 188 DAD----------KAPPAKPVKPTTPTAVATTTAATTTTGDLSPII----PAELKPAKEE 233
Query: 247 IPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERG 306
I F D S I NT ++L HL+ TGG ++TRFPPEPNGYLHIGHAKAM ++FG AK+ G
Sbjct: 234 IKFPDPSDNIQ-NTPKLLADHLKTTGGKIVTRFPPEPNGYLHIGHAKAMHLNFGYAKKNG 292
Query: 307 GYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHA 366
G CYLR+DDTNPE E +EYID I + V+W+G EP +ITY+S F LYE+A ELIRRG+A
Sbjct: 293 GKCYLRFDDTNPEKENQEYIDSIIDSVKWLGHEPCEITYSSSQFDTLYEMANELIRRGYA 352
Query: 367 YVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNF 426
YV HQT EI E REK +SP+R+R + E+LKLFEDMR G+ EEGKA LRMK DM++ N
Sbjct: 353 YVCHQTASEISEGREKMTDSPYRNRTVEENLKLFEDMRLGKFEEGKAILRMKGDMKHPNP 412
Query: 427 NMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWL 486
M DLIAYRIK+ HP +GDKWCIYPSYDY HC+VDSIENITHSLCTLEFE RR +Y WL
Sbjct: 413 CMRDLIAYRIKYHHHPMSGDKWCIYPSYDYTHCLVDSIENITHSLCTLEFEIRRLTYNWL 472
Query: 487 LHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTST 546
+ LGLY+P VWEY+RLN+++TV+SKRK+ LV NK V+GWDDP L TL RR+G T
Sbjct: 473 IDVLGLYRPVVWEYARLNLTHTVLSKRKIITLVQNKIVNGWDDPRLSTLNAFRRKGYTPE 532
Query: 547 SINAFVQGIGISRSD-SLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMH 605
+IN IG++R++ + I + LE R++L+ A R M V +P+KVVITN
Sbjct: 533 AINLLCDTIGVTRTNGTTISYELLELCCRQDLDGKATRAMAVFDPIKVVITNYPEDKSEE 592
Query: 606 LDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKC 665
++A P+ + +K+ FS +VYIE SDFRM+D+KD++GLAPGK +LL+YA+ IKC
Sbjct: 593 INA---PNIPSKPEKGTHKIDFSRIVYIERSDFRMEDNKDFFGLAPGKEILLKYAYNIKC 649
Query: 666 TEVIL-SDDKETILHIRAEYDPSKKTKPKVFLSFISCHAG 704
+VI +D K T LH+ YD +K + ++S AG
Sbjct: 650 EKVIQDADGKVTELHV--TYDKDNSSKKLKTIHWVSSVAG 687
>sp|Q9Y105|SYQ_DROME Probable glutamine--tRNA ligase OS=Drosophila melanogaster
GN=Aats-gln PE=1 SV=1
Length = 778
Score = 539 bits (1389), Expect = e-152, Method: Compositional matrix adjust.
Identities = 297/703 (42%), Positives = 419/703 (59%), Gaps = 34/703 (4%)
Query: 11 EILELFLKIGLDDRTAKNTIANNKVTANLT---AVIHEAAVTDGCERRIGNLLYTVATKY 67
+++ F +G+ ++ AK T+ N VT NL A A ++DG G L+Y +ATK
Sbjct: 5 DLIAKFQALGMSEQKAKETLKNANVTKNLQLSLAAAGSATLSDGT----GMLIYHMATKL 60
Query: 68 PTNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSE---NFEVDEFEEACGVGVEVS 124
H P L+ YIV K+ +++AA + G N ++ E+ CGVGV V+
Sbjct: 61 KPQTADHLPLLVRYIVEHKLDNTQRVDAALEYLLKCGQSLNANIDLQALEKECGVGVVVT 120
Query: 125 SEDIELTVNEVFEEN-KNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELL 183
E IE TV + + K +LE RY N + VR L WAD K VK ID +++LL
Sbjct: 121 PEQIERTVQAKIKASYKEALLEQRYHFNSFKILQDVRGELKWADAKSVKAAIDVEIFDLL 180
Query: 184 GERTAADIEKLSKKKEK----KEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEE 239
G +T AD++ +K +K K K E + + A+D + E + +F P E
Sbjct: 181 GPKTEADLKPQTKANDKPKAAKPKAEVTPAAQTAEAASDGATTISELMKTKV-HFHAPGE 239
Query: 240 NYKVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDF 299
N+K +DG V + +T+ +L +HL TGG V TRFPPEPNG LHIGHAKA+ ++F
Sbjct: 240 NFK-------ADGYV-VTEHTERLLKEHLARTGGKVHTRFPPEPNGILHIGHAKAININF 291
Query: 300 GLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVE 359
G A G CYLRYDDTNPE E++++ I+E+V+W+G++PFKITY+SD FQ+LYE AV
Sbjct: 292 GYAAAHDGVCYLRYDDTNPEKEEEKFFLAIKEMVEWLGYKPFKITYSSDNFQQLYEWAVV 351
Query: 360 LIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQ 419
LI +G AYV HQ EE+K + K SPWR+RPI ESL+LFEDM+ G+I+EG ATLRMK
Sbjct: 352 LINKGLAYVCHQKAEELKGFNPKP--SPWRERPIEESLRLFEDMKRGKIDEGAATLRMKV 409
Query: 420 DMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETR 479
++ D +AYRIKF H G WCIYP+YDY HC+ DS+E+ITHSLCT EF++R
Sbjct: 410 TLEEGKM---DPVAYRIKFISHHRTGSDWCIYPTYDYTHCLCDSLEDITHSLCTKEFQSR 466
Query: 480 RASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLR 539
R+SY+WL +ALG+Y P WEY RLN++ ++SKRK+ L+T + V WDDP L TL LR
Sbjct: 467 RSSYYWLCNALGIYCPVQWEYGRLNMNYALVSKRKIAKLITEQIVHDWDDPRLFTLTALR 526
Query: 540 RRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNME 599
RRG + +IN F +G++ + + LE +R+ LN TAPR +VVL PLKV I N
Sbjct: 527 RRGFPAEAINNFCAQMGVTGAQIAVDPAMLEAAVRDVLNVTAPRRLVVLEPLKVTIKNFP 586
Query: 600 SGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRY 659
+ L+ PD + +K+ V+YIE DF+++ K Y LAP +SV LR+
Sbjct: 587 HAAPVQLEV---PDFPQNPQQGTHKITLDKVIYIEQGDFKLEPEKGYRRLAPKQSVGLRH 643
Query: 660 A-FPIKCTEVILSDDKETILHIRAEYDPSKKT-KPKVFLSFIS 700
A I E++ ++ + P+++ KPK F+ ++S
Sbjct: 644 AGLVISVDEIVKDPATGQVVELICTSQPAEQAEKPKAFVQWVS 686
>sp|P47897|SYQ_HUMAN Glutamine--tRNA ligase OS=Homo sapiens GN=QARS PE=1 SV=1
Length = 775
Score = 521 bits (1342), Expect = e-147, Method: Compositional matrix adjust.
Identities = 287/653 (43%), Positives = 393/653 (60%), Gaps = 25/653 (3%)
Query: 13 LELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGC--ERRIGNLLYTVATKYPTN 70
L LF +GL ++ A+ T+ N+ ++A L +A T G ++ G LLY +A++
Sbjct: 7 LSLFTSLGLSEQKARETLKNSALSAQLREAATQAQQTLGSTIDKATGILLYGLASRLRDT 66
Query: 71 ALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIEL 130
+ L+ YI S KI T QL AA + S + + +FE CGVGV V+ E IE
Sbjct: 67 RRLS--FLVSYIASKKIHTEPQLSAALEYVRSHPLDPIDTVDFERECGVGVIVTPEQIEE 124
Query: 131 TVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAAD 190
V ++ +L RY N+G L R L WAD K++K +D ++ LLG + AD
Sbjct: 125 AVEAAINRHRPQLLVERYHFNMGLLMGEARAVLKWADGKMIKNEVDMQVLHLLGPKLEAD 184
Query: 191 IEKLSK--KKEKKEKKEKPEKD--EDKKFANDAPVQLPEEDLFPISNFPPPEENYKVHTE 246
+EK K K +E + KD E+ + A D + L E+ F P ENYK
Sbjct: 185 LEKKFKVAKARLEETDRRTAKDVVENGETA-DQTLSLMEQLRGEALKFHKPGENYK---- 239
Query: 247 IPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERG 306
+ G V + +T +L +HLE+TGG V TRFPPEPNG LHIGHAKA+ +FG AK
Sbjct: 240 ---TPGYV-VTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANN 295
Query: 307 GYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHA 366
G C+LR+DDTNPE E+ ++ I ++V W+G+ P+K+TY SDYF +LY AVELIRRG A
Sbjct: 296 GICFLRFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRGLA 355
Query: 367 YVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNF 426
YV HQ EE+K + + SPWRDRP+ ESL LFE MR G+ EG+ATLRMK M++
Sbjct: 356 YVCHQRGEELKGH--NTLPSPWRDRPMEESLLLFEAMRKGKFSEGEATLRMKLVMEDGKM 413
Query: 427 NMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWL 486
D +AYR+K+TPH GDKWCIYP+YDY HC+ DSIE+ITHSLCT EF+ RR+SYFWL
Sbjct: 414 ---DPVAYRVKYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWL 470
Query: 487 LHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTST 546
+AL +Y P WEY RLN+ V+SKRK+ LV V WDDP L TL LRRRG
Sbjct: 471 CNALDVYCPVQWEYGRLNLHYAVVSKRKILQLVATGAVRDWDDPRLFTLTALRRRGFPPE 530
Query: 547 SINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHL 606
+IN F +G++ + + + LE +R+ LN TAPR M VL L+V+ITN + + +
Sbjct: 531 AINNFCARVGVTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLESLRVIITNFPAAKSLDI 590
Query: 607 DAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRY 659
+P AD+ F++VPF+ +V+IE +DF+ + + LA G+ V LR+
Sbjct: 591 QVPNFP---ADETKGFHQVPFAPIVFIERTDFKEEPEPGFKRLAWGQPVGLRH 640
>sp|Q3MHH4|SYQ_BOVIN Glutamine--tRNA ligase OS=Bos taurus GN=QARS PE=2 SV=1
Length = 775
Score = 520 bits (1340), Expect = e-146, Method: Compositional matrix adjust.
Identities = 293/698 (41%), Positives = 405/698 (58%), Gaps = 32/698 (4%)
Query: 13 LELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGC--ERRIGNLLYTVATKYPTN 70
L LF +GL ++ A+ T+ N ++A L +A T G ++ G LLY +A++
Sbjct: 7 LSLFTGLGLSEQKARETLKNTVLSAQLREAATQAQQTLGSSIDKATGTLLYGLASRLRDP 66
Query: 71 ALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIEL 130
+ L+ YI S KI T QL AA + S + ++FE+ CGVGV V+ E IE
Sbjct: 67 RRLS--FLVSYITSRKIHTETQLSAALEYVRSHPLDPINTEDFEQECGVGVVVTPEQIEE 124
Query: 131 TVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAAD 190
V ++ +L RY ++G L R L WAD K++K +D ++ LLG +T D
Sbjct: 125 AVEAAINRHRAKLLVERYHFSMGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPKTETD 184
Query: 191 IEKLSKKKEKKEKKEKPEKDEDKKFANDAPV-----QLPEEDLFPISNFPPPEENYKVHT 245
+EK K K K + E+ ++ K + V L E+ F P ENYK
Sbjct: 185 LEK--KPKVAKARPEETDQRTAKDVVENGEVVVQTLSLMEQLRGEALKFHKPGENYKT-- 240
Query: 246 EIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKER 305
+ +T ++L +HL++TGG V TRFPPEPNG LHIGHAKA+ +FG AK
Sbjct: 241 ------PGYVTTPHTMDLLKQHLDITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKAN 294
Query: 306 GGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGH 365
G C+LR+DDTNPE E+ ++ I ++V W+G+ P+K+TY SDYF +LY AVELIRR
Sbjct: 295 NGICFLRFDDTNPEKEEAKFFTAIYDMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRDQ 354
Query: 366 AYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDN 425
AYV HQ EE+K + + SPWRDRPI ESL LFE MR G+ EG+ATLRMK M++
Sbjct: 355 AYVCHQRGEELKGH--NPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGK 412
Query: 426 FNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFW 485
D +AYR+K+TPH GD WCIYP+YDY HC+ DSIE+ITHSLCT EF+ RR+SYFW
Sbjct: 413 M---DPVAYRVKYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFW 469
Query: 486 LLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTS 545
L +AL +Y P WEY RLN+ V+SKRK+ LV V WDDP L TL LRRRG
Sbjct: 470 LCNALDVYCPVQWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPP 529
Query: 546 TSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMH 605
+IN F +G++ + + + LE +R+ LN TAPR M VL PL+VVITN + +
Sbjct: 530 EAINNFCARVGVTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLEPLQVVITNFPATKALD 589
Query: 606 LDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRY-AFPIK 664
+ +P AD+ F++VPF + V+IE DF+ + Y LA G+ V LR+ + I+
Sbjct: 590 IQVPNFP---ADETKGFHQVPFGSTVFIERMDFKEEPEPGYKRLAWGQPVGLRHTGYVIE 646
Query: 665 CTEVIL--SDDKETILHIRAEYDPSKKTKPKVFLSFIS 700
V+ S E++ D + KPK F+ ++S
Sbjct: 647 LQHVVKGPSGCVESLKVTCRRADAGE--KPKAFIHWVS 682
>sp|O62431|SYQ_CAEEL Probable glutamine--tRNA ligase OS=Caenorhabditis elegans GN=ers-1
PE=2 SV=1
Length = 786
Score = 517 bits (1331), Expect = e-145, Method: Compositional matrix adjust.
Identities = 292/710 (41%), Positives = 425/710 (59%), Gaps = 46/710 (6%)
Query: 14 ELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTNALV 73
E L +GL D T+ N K+T + +++ A+ + ++ G LLY +ATK
Sbjct: 5 EELLSLGLSDSKVAETLKNVKLTETIGSIVKLASESGEISKQKGTLLYQLATKLKPQVAA 64
Query: 74 HRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVN 133
H P ++ YI++ IKT QL AA + S + +V +FE++CGVGV V+ +DIE V
Sbjct: 65 HTPLVVKYIMNDGIKTEPQLSAAIEYLLSHTVKGIQVPDFEKSCGVGVVVTIDDIEAAVT 124
Query: 134 EVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAADIEK 193
+V +++ I+ RY G L +R LPWAD I K+ +D R ELLG +TA D+
Sbjct: 125 KVIGQHREKIVAERYSFPAGKLLGELRALLPWADGAITKKEVDLRFLELLGPKTAEDLAP 184
Query: 194 LSKKKE-------------------KKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNF 234
K+K+ K +K+ PE+ FA+ A +E L ++F
Sbjct: 185 KKKEKKPEGPKPSKDAAAAATAPGTKNQKEASPEE-----FADGAETM--DELLRTRAHF 237
Query: 235 PPPEENYKVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKA 294
EN+K DG V T E+L H+ GG V+TRFPPEPNG LHIGHAKA
Sbjct: 238 HKVGENFK-------QDGYV-TTPKTAELLKAHVAAVGGKVVTRFPPEPNGVLHIGHAKA 289
Query: 295 MFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELY 354
+ ++FG AK GG C LR+DDTNPE E++++ IE+IV W+G++P ++T++SD FQ+LY
Sbjct: 290 ININFGYAKAMGGVCNLRFDDTNPEKEEEKFFSAIEDIVHWLGYDPARVTHSSDNFQQLY 349
Query: 355 ELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKAT 414
AV+LI++G A+V HQ EE++ + + SPWR+RPI E+++LFEDM+NG+ +EG+AT
Sbjct: 350 LWAVKLIQKGLAFVCHQKVEEMRGFEVQL--SPWRERPIEENIQLFEDMKNGKFDEGEAT 407
Query: 415 LRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTL 474
LR+K ++ D +AYRIK+ PH G++WCIYP+YDY HC+ DSIENITHSLCT
Sbjct: 408 LRLKLTLEEGKV---DPVAYRIKYVPHHRTGNQWCIYPTYDYTHCLCDSIENITHSLCTK 464
Query: 475 EFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMT 534
EF++RR+SY+WL +AL +Y P WEY RLNV+ TV+SKRK+ L+T K V+ WDDP L T
Sbjct: 465 EFQSRRSSYYWLCNALDIYCPVQWEYGRLNVNYTVVSKRKILKLITTKTVNDWDDPRLFT 524
Query: 535 LAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVV 594
L LRRRG+ S +IN FV +G++ S +I L+ +R+ LN APRTM VL LK+
Sbjct: 525 LTALRRRGIPSEAINRFVAKLGLTMSQMVIDPHVLDATVRDYLNIHAPRTMAVLEGLKLT 584
Query: 595 ITNM-ESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDS-KDYYGLAPG 652
I N E +D +P D + V ++IE SD++ DS K + L P
Sbjct: 585 IENFSELNLPSSVDVPDFPSDPTDPRK--HSVSVDREIFIEKSDYKPDDSDKSFRRLTPK 642
Query: 653 KSVLLRYAFPIK--CTEVILSDDKETILHIRAEYDPSKKTKPKVFLSFIS 700
++V L++ + EV ++ T + ++AE S+K KPK F+ +++
Sbjct: 643 QAVGLKHIGLVLRFVKEVKDAEGHVTEVVVKAE-KLSEKDKPKAFIHWVA 691
>sp|Q9Y7Y8|SYQ_SCHPO Probable glutamine--tRNA ligase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=qrs1 PE=3 SV=1
Length = 811
Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust.
Identities = 301/714 (42%), Positives = 421/714 (58%), Gaps = 48/714 (6%)
Query: 8 DKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAV-TDGCERRIGNLLYTVAT- 65
D E+ F KIGL++ T K+T+ N K++++L VI E V + GC+R IGNLL+T+A
Sbjct: 4 DYEELRAKFTKIGLNETTVKDTLKNKKLSSSLNKVIEETNVGSSGCDRTIGNLLFTLANA 63
Query: 66 ----KYP-TNALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVG 120
K P +NA H + IVS +KT Q+ AA ++ + + EF++ GVG
Sbjct: 64 SLKQKDPKSNA--HEAFIASKIVSGDLKTNLQVNAAITY--CKDKDTIDESEFDKETGVG 119
Query: 121 VEVSSEDIELTVNEVFEENKNTILELRYR---TNVGDLFAHVRKRLPWADPKIVKQLIDA 177
V ++ E IE V + ENK+ ILE RY+ + L H L WA VKQ +D
Sbjct: 120 VVLTPEQIEQLVGDYVAENKSKILEQRYQLLNPSASALRQHAL--LKWAPQLEVKQTLDR 177
Query: 178 RMYELLGERTAADIEKLSKKK----EKKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISN 233
+ ELLG +T D KK K+K K +++K ++ Q + ++F
Sbjct: 178 KFLELLGPKTEQDAAAGKKKGAKAKNSKQKTVDSGKAKEQKIVSE---QSKKYNMF---- 230
Query: 234 FPPPEENYKVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAK 293
EE + P + ++ E + +HL+ TGG V+TRFPPEPNGYLHIGH+K
Sbjct: 231 ----EEGFLAKLHKPGGNTQLI-----PERMKEHLQATGGGVVTRFPPEPNGYLHIGHSK 281
Query: 294 AMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQEL 353
A+ V+FG A+ G CYLR+DDTNPEAE++ Y + I+++V W+G++P+KITY+SDYF +L
Sbjct: 282 AIAVNFGFARYHNGVCYLRFDDTNPEAEEERYFESIKDLVAWLGFQPYKITYSSDYFDKL 341
Query: 354 YELAVELIRRGHAYVDHQTPEEIKEYREKKMNSP-----WRDRPIAESLKLFEDMRNGRI 408
YELA ELI+R AYV H T EIK+ R + P RDRPI ESL F +MR+G+
Sbjct: 342 YELAEELIKRDKAYVCHCTDAEIKKARGGEERGPRYACVHRDRPIEESLLEFRNMRDGKY 401
Query: 409 EEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENIT 468
+ +A LRMKQD+ + N M+DLIAYR+ +PHP GDKW IYP+YD+ HC+VDS ENI+
Sbjct: 402 QPKEAILRMKQDLSDGNPQMWDLIAYRVLNSPHPRTGDKWKIYPTYDFTHCLVDSFENIS 461
Query: 469 HSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWD 528
HSLCT EF R SY WL +AL +Y P EY RLNV T+MSKRK+ LV YV GW+
Sbjct: 462 HSLCTTEFILSRVSYEWLCNALEVYCPAQREYGRLNVVGTLMSKRKIMKLVKEGYVHGWN 521
Query: 529 DPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVL 588
DP L TL LRRRGV +I FV +G++ + S I + R E +R+ L + PR M +
Sbjct: 522 DPRLYTLVALRRRGVPPGAILEFVSEVGVTTAVSNIEVARFENCVRKFLENSVPRLMFLP 581
Query: 589 NPLKVVITNMESGTIMHLDAKRWP-DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYY 647
+P+KV + N++ ++ P D SAF + +YI+ SDFR + S D++
Sbjct: 582 DPIKVTLENLDDSYREQIEIPFNPKDPSMGSRSAF----LTKHIYIDRSDFREEASSDFF 637
Query: 648 GLAPGKSV-LLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKVFLSFIS 700
L G+ V L R + P+ V+ +D+ E I I AEYD S KPK F+ ++S
Sbjct: 638 RLTLGQPVGLFRASHPVVAKRVVKNDEGEPI-EIIAEYDASSSKKPKTFIQWVS 690
>sp|P13188|SYQ_YEAST Glutamine--tRNA ligase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GLN4 PE=1 SV=2
Length = 809
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 273/706 (38%), Positives = 402/706 (56%), Gaps = 40/706 (5%)
Query: 11 EILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTVATKYPTN 70
E+ +LF ++G +D+ K + N KV+ +L +I E + L++ +A+
Sbjct: 6 ELTQLFSQVGFEDKKVKEIVKNKKVSDSLYKLIKETPSDYQWNKSTRALVHNLASFVKGT 65
Query: 71 ALVHRPTLLLYIVSSKIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIEL 130
L ++ I++ +KT Q++AAF + + G + ++ E GVG+E++ + +
Sbjct: 66 DLPKSELIVNGIINGDLKTSLQVDAAFKYVKANGEASTKMG-MNENSGVGIEITEDQVRN 124
Query: 131 TVNEVFEENKNTILELRYRTNVGDLFAHVR--KRLPWADPKIVKQLIDARMYELLGERTA 188
V + +ENK IL RY+ G +FA V+ K L WADP+ K +ID + +LLG +
Sbjct: 125 YVMQYIQENKERILTERYKLVPG-IFADVKNLKELKWADPRSFKPIIDQEVLKLLGPKDE 183
Query: 189 ADIEKLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEENYKVHTEIP 248
D+ K K +K+K +K D A+ P + + F + + EN + + E+
Sbjct: 184 RDLIKKKTKNNEKKKTNSAKKSSDNS-ASSGPKRTMFNEGF-LGDLHKVGENPQAYPEL- 240
Query: 249 FSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGY 308
+ +HLEVTGG V TRFPPEPNGYLHIGH+KA+ V+FG AK G
Sbjct: 241 ---------------MKEHLEVTGGKVRTRFPPEPNGYLHIGHSKAIMVNFGYAKYHNGT 285
Query: 309 CYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYV 368
CYLR+DDTNPE E EY + I+ +V W+G++P+KITY+SDYF ELY LA LI+ G AYV
Sbjct: 286 CYLRFDDTNPEKEAPEYFESIKRMVSWLGFKPWKITYSSDYFDELYRLAEVLIKNGKAYV 345
Query: 369 DHQTPEEIKEYRE-KKMNSPW--------RDRPIAESLKLFEDMRNGRIEEGKATLRMKQ 419
H T EEIK R K+ +P RD+ I ++L+ F DMR+G+ + G+A LRMKQ
Sbjct: 346 CHCTAEEIKRGRGIKEDGTPGGERYACKHRDQSIEQNLQEFRDMRDGKYKPGEAILRMKQ 405
Query: 420 DMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETR 479
D+ + + M+DLIAYR+ PHP G KW IYP+YD+ HC+VDS+ENITHSLCT EF
Sbjct: 406 DLNSPSPQMWDLIAYRVLNAPHPRTGTKWRIYPTYDFTHCLVDSMENITHSLCTTEFYLS 465
Query: 480 RASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLR 539
R SY WL + +++P EY RLN++ TV+SKRK+ LV K+V GWDDP L TL +R
Sbjct: 466 RESYEWLCDQVHVFRPAQREYGRLNITGTVLSKRKIAQLVDEKFVRGWDDPRLFTLEAIR 525
Query: 540 RRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNME 599
RRGV +I +F+ +G++ S + I++ R E +R+ L T PR M VL+P++VV+ N+
Sbjct: 526 RRGVPPGAILSFINTLGVTTSTTNIQVVRFESAVRKYLEDTTPRLMFVLDPVEVVVDNLS 585
Query: 600 SGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMK-DSKDYYGLAPGKSVLLR 658
+ + P VPF+N YIE SDF D K+++ L P + V L
Sbjct: 586 DD---YEELATIPYRPGTPEFGERTVPFTNKFYIERSDFSENVDDKEFFRLTPNQPVGLI 642
Query: 659 YAFPIKCTEVILSDDKETILHIRAEYD-----PSKKTKPKVFLSFI 699
+ + D+ I+ I YD SK KPK ++ ++
Sbjct: 643 KVSHTVSFKSLEKDEAGKIIRIHVNYDNKVEEGSKPKKPKTYIQWV 688
>sp|A7MT45|SYQ_VIBHB Glutamine--tRNA ligase OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=glnS PE=3 SV=1
Length = 556
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/459 (47%), Positives = 294/459 (64%), Gaps = 18/459 (3%)
Query: 261 KEVLDKHL-EVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 319
++++DK L + +V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNPE
Sbjct: 13 RQIIDKDLADGKHTSVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPE 72
Query: 320 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 378
E EY++ I++ V W+G+E ++ Y+S+YF +LYE A+ELI +G AYVD +PE+I+E
Sbjct: 73 KEDIEYVESIKKDVNWLGFEWDGEVCYSSNYFDKLYEYAIELINKGLAYVDELSPEQIRE 132
Query: 379 YR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 434
YR SP+RDRPI E+L LFE MR G EEGKA LR K DM + M D + Y
Sbjct: 133 YRGTLTAPGKPSPYRDRPIEENLALFEKMRAGEFEEGKACLRAKIDMGSSFMVMRDPVIY 192
Query: 435 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 493
R++F H GDKWCIYP YD+ HCI D++E ITHS+CTLEF R Y W+L + +
Sbjct: 193 RVRFATHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFMDNRRLYDWVLDNITIDC 252
Query: 494 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 553
+P+ +E+SRLN+ TVMSKRKLN LVT K VDGWDDP + T++GLRRRG TS SI F +
Sbjct: 253 RPHQYEFSRLNLEYTVMSKRKLNQLVTEKLVDGWDDPRMPTVSGLRRRGFTSASIREFCK 312
Query: 554 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 613
IG+++ +++I LE IR++LN+ APR M VL+P+K+VI N E G + L P+
Sbjct: 313 RIGVTKQENMIEFGSLESCIRDDLNENAPRAMAVLDPVKIVIENFEEGAVETLTVANHPN 372
Query: 614 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 673
+VPF+ V+IE DFR + +K Y L GK V LR A+ IK E I D
Sbjct: 373 KP---EMGEREVPFTREVWIEREDFREEANKKYKRLVLGKEVRLRGAYVIK-AERIEKDA 428
Query: 674 KETILHIRAEYD-------PSKKTKPKVFLSFISCHAGI 705
+ I I YD P+ K K + ++S +
Sbjct: 429 EGNITTIFCTYDAETLGKNPADGRKVKGVIHWVSADKAL 467
>sp|Q87RG4|SYQ_VIBPA Glutamine--tRNA ligase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=glnS PE=3 SV=1
Length = 556
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/433 (48%), Positives = 286/433 (66%), Gaps = 11/433 (2%)
Query: 261 KEVLDKHL-EVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 319
++++DK L + +V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNPE
Sbjct: 13 RQIIDKDLADGKHTSVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPE 72
Query: 320 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 378
E EY++ I++ V W+G+E ++ Y+S+YF +LYE A+ELI +G AYVD +PE+I+E
Sbjct: 73 KEDIEYVESIKKDVNWLGFEWDGEVCYSSNYFDKLYEYAIELINKGLAYVDELSPEQIRE 132
Query: 379 YR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 434
YR E SP+RDR + E+L LFE MR G EEGKA LR K DM + M D + Y
Sbjct: 133 YRGTLKEPGKPSPYRDRSVEENLALFEKMRAGEFEEGKACLRAKIDMGSSFMVMRDPVLY 192
Query: 435 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 493
R++F H GDKWCIYP YD+ HCI D++E ITHS+CTLEF R Y W+L + +
Sbjct: 193 RVRFATHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFMDNRRLYDWVLDNITIDC 252
Query: 494 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 553
+P+ +E+SRLN+ TVMSKRKLN LVT K V+GWDDP + T++GLRRRG T SI F +
Sbjct: 253 RPHQYEFSRLNLEYTVMSKRKLNQLVTEKLVNGWDDPRMPTVSGLRRRGFTPASIREFCK 312
Query: 554 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 613
IG+++ +++I LE IR++LN+ APR M VL+P+KVVI N E G + +L P+
Sbjct: 313 RIGVTKQENMIEFSSLESCIRDDLNENAPRAMAVLDPVKVVIENFEVGAVENLTLANHPN 372
Query: 614 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 673
+VPF+ V+IE DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 373 KP---EMGEREVPFTREVWIEREDFREEANKKYKRLVLGKEVRLRGAYVIK-AERVEKDA 428
Query: 674 KETILHIRAEYDP 686
+ I I YDP
Sbjct: 429 EGNITTIYCTYDP 441
>sp|A5N6Y3|SYQ_CLOK5 Glutamine--tRNA ligase OS=Clostridium kluyveri (strain ATCC 8527 /
DSM 555 / NCIMB 10680) GN=glnS PE=3 SV=1
Length = 556
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/420 (48%), Positives = 273/420 (65%), Gaps = 9/420 (2%)
Query: 275 VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQ 334
V+TRFPPEPNGYLHIGHAK++ ++F LA E G LR+DDTNP E EY++ I+E V+
Sbjct: 27 VVTRFPPEPNGYLHIGHAKSIVLNFSLADEFEGKVNLRFDDTNPSKEDVEYVESIKEDVK 86
Query: 335 WMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYR----EKKMNSPWRD 390
W+G+ + + S YF+ +YE AV LI++G AYV T +EI+EYR + SP+R+
Sbjct: 87 WLGYNWDNLCFASSYFERMYEYAVFLIKKGKAYVCDLTADEIREYRGTLTKPGKESPYRN 146
Query: 391 RPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCI 450
R + E+ KLFE M+NG ++G+ LR K DM + N NM D + YRI H + GD+WCI
Sbjct: 147 RDVEENFKLFEGMKNGEFKDGEKVLRAKIDMASPNINMRDPVLYRIAHASHHNTGDRWCI 206
Query: 451 YPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-YQPYVWEYSRLNVSNTV 509
YP YD+AH + D+IE +THS+CTLEFE R Y W++ + +P E++RLN++NTV
Sbjct: 207 YPMYDFAHPLEDAIEGVTHSICTLEFEDHRPLYDWIIQECEIENRPKQIEFARLNMTNTV 266
Query: 510 MSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRL 569
MSKRKL LV +VDGWDDP + T+AGLRRRG T SI F + IG+S++ S++ L
Sbjct: 267 MSKRKLKQLVDENFVDGWDDPRMPTIAGLRRRGFTPESIRNFCRAIGVSKASSIVDSQML 326
Query: 570 EYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSN 629
+Y +R++L K APRTM +LNPLKVVITN G + PD D ++ +VPFS
Sbjct: 327 DYFLRDDLEKEAPRTMAILNPLKVVITNYPEGKTETFKIENNPD---DASAGVREVPFSR 383
Query: 630 VVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKK 689
+YIE DF K YY L PG V L+ A+ IKCTE I D ++ +R YDP+ K
Sbjct: 384 EIYIEQEDFMENPPKKYYRLFPGNEVRLKSAYFIKCTEAI-KDKDGNVIELRCTYDPASK 442
>sp|A5F2T1|SYQ_VIBC3 Glutamine--tRNA ligase OS=Vibrio cholerae serotype O1 (strain ATCC
39541 / Ogawa 395 / O395) GN=glnS PE=3 SV=1
Length = 556
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/459 (45%), Positives = 295/459 (64%), Gaps = 18/459 (3%)
Query: 261 KEVLDKHL-EVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 319
++++DK L + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNPE
Sbjct: 13 RQIIDKDLADGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPE 72
Query: 320 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 378
E EY++ I++ V W+G++ ++ Y+SDYF +LYE A+ELI++G AYVD TPE+I+E
Sbjct: 73 KENLEYVESIKKDVTWLGFDWSGEVCYSSDYFDKLYEYAIELIQKGLAYVDELTPEQIRE 132
Query: 379 YR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 434
YR E +SP+RDR + E+L LFE MR G EG+A LR K DM + M D + Y
Sbjct: 133 YRGTLTEPGKHSPYRDRSVEENLALFEKMRAGEFAEGQACLRAKIDMASSFIVMRDPVLY 192
Query: 435 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 493
R++F H GDKWCIYP YD+ HCI D++E ITHS+CTLEF+ R Y W+L + +
Sbjct: 193 RVRFAEHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYDWVLDNITIPC 252
Query: 494 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 553
P +E+SRLN+ TVMSKRKLN LVT K V GWDDP + T++GLRRRG T ++I F +
Sbjct: 253 HPRQYEFSRLNLEYTVMSKRKLNQLVTEKLVTGWDDPRMPTISGLRRRGFTPSAIREFCK 312
Query: 554 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 613
IG+++ +++I LE IR++LN+ APR M VL+P+K+VI N +GT+ L P+
Sbjct: 313 RIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFAAGTVETLTLANHPN 372
Query: 614 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 673
+VPF+ ++IE DFR + +K Y L GK V LR A+ IK E I D+
Sbjct: 373 KP---EMGDREVPFTRELWIEREDFREEANKKYKRLVLGKEVRLRGAYVIK-AERIEKDE 428
Query: 674 KETILHIRAEYD-------PSKKTKPKVFLSFISCHAGI 705
+ I I YD P+ K K + ++S G+
Sbjct: 429 QGNITTIFCSYDPETLGKNPADGRKVKGVIHWVSAEKGV 467
>sp|Q7N743|SYQ_PHOLL Glutamine--tRNA ligase OS=Photorhabdus luminescens subsp. laumondii
(strain TT01) GN=glnS PE=3 SV=1
Length = 555
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/456 (47%), Positives = 294/456 (64%), Gaps = 23/456 (5%)
Query: 261 KEVLDKHLEVTG--GNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L TG +V TRFPPEPNGYLHIGHAK++ ++FG+AK+ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ATGKHTSVHTRFPPEPNGYLHIGHAKSICLNFGVAKDYQGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ VQW+G+E I Y+S+YF LY+ A+ELI +G AYVD +PEEI+
Sbjct: 72 VKEDVEYVDSIKNDVQWLGFEWSGDIRYSSNYFDTLYQYAIELINKGLAYVDQLSPEEIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR E NSP+RDR I E+L LFE MR G +EGKA LR K DM + M D +
Sbjct: 132 EYRGTLKEPGKNSPYRDRTIEENLVLFEKMRAGEFDEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQCGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLENITID 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
+P +E+SRLN+ TVMSKRKLN LV +K V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 CRPRQYEFSRLNLEYTVMSKRKLNLLVADKIVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESG-TIMHLDAKRW 611
+ IG+++ D+ + + LE IR++LN+ APR M VL+P+++VI NM G I+ +
Sbjct: 312 RRIGVTKQDNNVEMAALESCIRDDLNENAPRAMAVLDPVRLVIENMPEGEQILSM----- 366
Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
P+ +VPFS +YI+ +DFR + ++ Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSREVPFSREIYIDRADFREEANRQYKRLVLGKEVRLRNAYIIK-AERVEK 425
Query: 672 DDKETILHIRAEY-------DPSKKTKPKVFLSFIS 700
D + I I Y DP+ K K + ++S
Sbjct: 426 DADDNITTIYCSYDDQTLNKDPADGRKVKGVIHWVS 461
>sp|C3LTP5|SYQ_VIBCM Glutamine--tRNA ligase OS=Vibrio cholerae serotype O1 (strain
M66-2) GN=glnS PE=3 SV=1
Length = 556
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/459 (45%), Positives = 295/459 (64%), Gaps = 18/459 (3%)
Query: 261 KEVLDKHL-EVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 319
++++DK L + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNPE
Sbjct: 13 RQIIDKDLADGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPE 72
Query: 320 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 378
E EY++ I++ V W+G++ ++ Y+SDYF +LYE A+ELI++G AYVD TPE+I+E
Sbjct: 73 KENLEYVESIKKDVTWLGFDWSGEVCYSSDYFDKLYEYAIELIQKGLAYVDELTPEQIRE 132
Query: 379 YR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 434
YR E +SP+RDR + E+L LFE MR G EG+A LR K DM + M D + Y
Sbjct: 133 YRGTLTEPGKHSPYRDRSVEENLALFEKMRAGEFAEGQACLRAKIDMASSFIVMRDPVLY 192
Query: 435 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 493
R++F H GDKWCIYP YD+ HCI D++E ITHS+CTLEF+ R Y W+L + +
Sbjct: 193 RVRFAEHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYDWVLDNITIPC 252
Query: 494 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 553
P +E+SRLN+ TVMSKRKLN LVT K V GWDDP + T++GLRRRG T ++I F +
Sbjct: 253 HPRQYEFSRLNLEYTVMSKRKLNQLVTEKLVTGWDDPRMPTISGLRRRGFTPSAIREFCK 312
Query: 554 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 613
IG+++ +++I LE IR++LN+ APR M VL+P+K+VI N +GT+ L P+
Sbjct: 313 RIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFAAGTVETLTLANHPN 372
Query: 614 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 673
+VPF+ ++IE DFR + +K Y L GK V LR A+ IK E I D+
Sbjct: 373 KP---EMGDREVPFTRELWIEREDFREEANKKYKRLVLGKEVRLRGAYVIK-AERIEKDE 428
Query: 674 KETILHIRAEYD-------PSKKTKPKVFLSFISCHAGI 705
+ I I YD P+ K K + ++S G+
Sbjct: 429 QGNITTIFCSYDPETLGKNPADGRKVKGVIHWVSAEKGV 467
>sp|Q9KTA6|SYQ_VIBCH Glutamine--tRNA ligase OS=Vibrio cholerae serotype O1 (strain ATCC
39315 / El Tor Inaba N16961) GN=glnS PE=3 SV=1
Length = 556
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/459 (45%), Positives = 295/459 (64%), Gaps = 18/459 (3%)
Query: 261 KEVLDKHL-EVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 319
++++DK L + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNPE
Sbjct: 13 RQIIDKDLADGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPE 72
Query: 320 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 378
E EY++ I++ V W+G++ ++ Y+SDYF +LYE A+ELI++G AYVD TPE+I+E
Sbjct: 73 KENLEYVESIKKDVTWLGFDWSGEVCYSSDYFDKLYEYAIELIQKGLAYVDELTPEQIRE 132
Query: 379 YR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 434
YR E +SP+RDR + E+L LFE MR G EG+A LR K DM + M D + Y
Sbjct: 133 YRGTLTEPGKHSPYRDRSVEENLALFEKMRAGEFAEGQACLRAKIDMASSFIVMRDPVLY 192
Query: 435 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 493
R++F H GDKWCIYP YD+ HCI D++E ITHS+CTLEF+ R Y W+L + +
Sbjct: 193 RVRFAEHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYDWVLDNITIPC 252
Query: 494 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 553
P +E+SRLN+ TVMSKRKLN LVT K V GWDDP + T++GLRRRG T ++I F +
Sbjct: 253 HPRQYEFSRLNLEYTVMSKRKLNQLVTEKLVTGWDDPRMPTISGLRRRGFTPSAIREFCK 312
Query: 554 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 613
IG+++ +++I LE IR++LN+ APR M VL+P+K+VI N +GT+ L P+
Sbjct: 313 RIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFAAGTVETLTLANHPN 372
Query: 614 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 673
+VPF+ ++IE DFR + +K Y L GK V LR A+ IK E I D+
Sbjct: 373 KP---EMGDREVPFTRELWIEREDFREEANKKYKRLVLGKEVRLRGAYVIK-AERIEKDE 428
Query: 674 KETILHIRAEYD-------PSKKTKPKVFLSFISCHAGI 705
+ I I YD P+ K K + ++S G+
Sbjct: 429 QGNITTIFCSYDPETLGKNPADGRKVKGVIHWVSAEKGV 467
>sp|B5FC12|SYQ_VIBFM Glutamine--tRNA ligase OS=Vibrio fischeri (strain MJ11) GN=glnS
PE=3 SV=1
Length = 552
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/459 (45%), Positives = 292/459 (63%), Gaps = 18/459 (3%)
Query: 261 KEVLDKHLEVTG-GNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 319
++++D+ L+ +V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNPE
Sbjct: 13 RQIIDEDLKSGKHSSVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPE 72
Query: 320 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 378
E EY++ I+ V W+G++ I Y+S+YF +LY AVELI +G AYVD TPE+++E
Sbjct: 73 KEDIEYVESIKNDVNWLGFQWSGDIQYSSNYFDKLYGYAVELIEKGLAYVDELTPEQMRE 132
Query: 379 YR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 434
YR E NSP+RDR + E+L LFE MR+G+ +EG LR K DM + + D + Y
Sbjct: 133 YRGSLKEPGKNSPYRDRSVEENLALFEQMRDGKFKEGTICLRAKIDMASSFIVLRDPVIY 192
Query: 435 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 493
R++F H GDKWCIYP YD+ HCI D++E ITHS+CTLEF+ R Y W+L + +
Sbjct: 193 RVRFATHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYDWVLENITIDC 252
Query: 494 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 553
QP +E+SRLN+ TVMSKRKLN LVT K V+GWDDP + T++GLRRRG TS SI F +
Sbjct: 253 QPRQYEFSRLNLEYTVMSKRKLNQLVTEKLVNGWDDPRMPTVSGLRRRGFTSASIREFCK 312
Query: 554 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 613
IG+++ +++I LE IR++LN++APR M VL P+K+VI N E G + L+ P+
Sbjct: 313 RIGVTKQENMIEFSSLESCIRDDLNESAPRAMAVLEPVKLVIENYEEGKVETLNIANHPN 372
Query: 614 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 673
+VPF+ VYIE DFR + +K Y L GK V LR A+ I+ I D+
Sbjct: 373 KP---EMGTREVPFTREVYIEQDDFREEANKKYKRLVLGKEVRLRGAYVIQANR-IEKDE 428
Query: 674 KETILHIRAEYD-------PSKKTKPKVFLSFISCHAGI 705
I I YD P+ K K + ++S +
Sbjct: 429 AGNITTIFCSYDEDTLGKNPADGRKVKGVIHWVSADKAL 467
>sp|Q5E6P2|SYQ_VIBF1 Glutamine--tRNA ligase OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=glnS PE=3 SV=1
Length = 552
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/459 (45%), Positives = 292/459 (63%), Gaps = 18/459 (3%)
Query: 261 KEVLDKHLEVTG-GNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 319
++++D+ L+ +V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNPE
Sbjct: 13 RQIIDEDLKSGKHSSVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPE 72
Query: 320 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 378
E EY++ I+ V W+G++ I Y+S+YF +LY AVELI +G AYVD TPE+++E
Sbjct: 73 KEDIEYVESIKNDVNWLGFQWSGDIQYSSNYFDKLYGYAVELIEKGLAYVDELTPEQMRE 132
Query: 379 YR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 434
YR E NSP+RDR + E+L LFE MR+G+ +EG LR K DM + + D + Y
Sbjct: 133 YRGSLKEPGKNSPYRDRSVEENLALFEQMRDGKFKEGTICLRAKIDMASSFIVLRDPVIY 192
Query: 435 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 493
R++F H GDKWCIYP YD+ HCI D++E ITHS+CTLEF+ R Y W+L + +
Sbjct: 193 RVRFATHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYDWVLENITIDC 252
Query: 494 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 553
QP +E+SRLN+ TVMSKRKLN LVT K V+GWDDP + T++GLRRRG TS SI F +
Sbjct: 253 QPRQYEFSRLNLEYTVMSKRKLNQLVTEKLVNGWDDPRMPTVSGLRRRGFTSASIREFCK 312
Query: 554 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 613
IG+++ +++I LE IR++LN++APR M VL P+K+VI N E G + L+ P+
Sbjct: 313 RIGVTKQENMIEFSSLESCIRDDLNESAPRAMAVLEPVKLVIENYEEGKVETLNIANHPN 372
Query: 614 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 673
+VPF+ VYIE DFR + +K Y L GK V LR A+ I+ I D+
Sbjct: 373 KP---EMGTREVPFTREVYIEQDDFREEANKKYKRLVLGKEVRLRGAYVIQANR-IEKDE 428
Query: 674 KETILHIRAEYD-------PSKKTKPKVFLSFISCHAGI 705
I I YD P+ K K + ++S +
Sbjct: 429 AGNITTIFCSYDEDTLGKNPADGRKVKGVIHWVSADKAL 467
>sp|Q88IU5|SYQ_PSEPK Glutamine--tRNA ligase OS=Pseudomonas putida (strain KT2440)
GN=glnS PE=3 SV=1
Length = 567
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/419 (49%), Positives = 270/419 (64%), Gaps = 11/419 (2%)
Query: 274 NVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIV 333
+++TRFPPEPNGYLHIGHAK++ V+FGLAKE GG C+LR+DDTNP E +EYID I+ V
Sbjct: 40 SIVTRFPPEPNGYLHIGHAKSICVNFGLAKEFGGVCHLRFDDTNPAKEDQEYIDAIQSDV 99
Query: 334 QWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYR----EKKMNSPW 388
+W+G+E + Y SDYF +L++ AVELI+RG AYV TPE+ KEYR E NSP+
Sbjct: 100 KWLGFEWGGDVRYASDYFDQLHDWAVELIKRGKAYVCDLTPEQAKEYRGNLKEPGKNSPF 159
Query: 389 RDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKW 448
R+R + E+L LF M+ G ++G+ LR K DM + N N+ D I YRI+ H GDKW
Sbjct: 160 RERSVEENLDLFARMKAGEFKDGERVLRAKIDMASPNMNLRDPILYRIRHAHHHQTGDKW 219
Query: 449 CIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-YQPYVWEYSRLNVSN 507
CIYP+YD+ H D+IE ITHS+CTLEFE R Y W L L + P +E+SRLN++
Sbjct: 220 CIYPNYDFTHGQSDAIEGITHSICTLEFEGHRPLYDWFLDNLPVPAHPRQYEFSRLNLNY 279
Query: 508 TVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLD 567
T+ SKRKL LV K+VD WDDP + TL+G RRRG T SI F + IG +RSD ++ +
Sbjct: 280 TITSKRKLKQLVDEKHVDAWDDPRMSTLSGFRRRGYTPASIRNFCEMIGTNRSDGVVDMS 339
Query: 568 RLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPF 627
LE+ IR++L++TAPR M VL PLKVVITN G + L+ R P +PF
Sbjct: 340 MLEFSIRDDLDRTAPRAMCVLRPLKVVITNYPEGQVEQLELPRHPKEDM----GVRVLPF 395
Query: 628 SNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDP 686
S +YI+ DF + K Y L P V LR ++ I+ E I D I+ +R YDP
Sbjct: 396 SRELYIDRDDFMEEPPKGYKRLEPAGEVRLRGSYVIRADEAI-KDADGNIVELRCSYDP 453
>sp|B4EV71|SYQ_PROMH Glutamine--tRNA ligase OS=Proteus mirabilis (strain HI4320) GN=glnS
PE=3 SV=1
Length = 555
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 286/438 (65%), Gaps = 12/438 (2%)
Query: 261 KEVLDKHLEVTGGN-VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 319
++++D+ L N V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDLATGKHNSVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGKCNLRFDDTNPV 72
Query: 320 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 378
E EYI+ I++ VQW+G++ + Y+SDYF +LY+ A+ELI +G AYVD + EEI+E
Sbjct: 73 KEDVEYINSIQKDVQWLGFQWDGNVHYSSDYFDQLYQYAIELINKGLAYVDELSAEEIRE 132
Query: 379 YR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 434
YR E NSP+R R + E+L LFE MR G EEGKA LR K DM + M D + Y
Sbjct: 133 YRGTLKEPGKNSPYRSRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 435 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 493
RIKF H G+KWCIYP YD+ HCI D++ENITHSLCTLEF+ R Y W+L + +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALENITHSLCTLEFQDNRRLYDWVLDNITIPC 252
Query: 494 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 553
P +E+SRLN+ TVMSKRKLN LVT VDGWDDP + T++GLRRRG T+ SI F Q
Sbjct: 253 HPRQYEFSRLNLEYTVMSKRKLNQLVTENIVDGWDDPRMPTISGLRRRGYTAESIREFCQ 312
Query: 554 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 613
IG+++ D+ + + LE IR++LN+ APR M V++P+++VI NM G + L A P+
Sbjct: 313 RIGVTKQDNNVEMASLEACIRDDLNENAPRAMAVIDPVRLVIENMPEGEEI-LTAPNHPN 371
Query: 614 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 673
+VPFS +YI+ +DF+ + ++ Y L GK V LR A+ IK E + D+
Sbjct: 372 KP---EMGTREVPFSREIYIDRADFKEEANRQYKRLVLGKEVRLRNAYVIK-AERVEKDE 427
Query: 674 KETILHIRAEYDPSKKTK 691
+ I I YDP K
Sbjct: 428 QGEITTIYCTYDPQTLNK 445
>sp|P57847|SYQ_PASMU Glutamine--tRNA ligase OS=Pasteurella multocida (strain Pm70)
GN=glnS PE=3 SV=1
Length = 559
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/436 (48%), Positives = 287/436 (65%), Gaps = 18/436 (4%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 23 RQIIDEDL-ASGKHTGVQTRFPPEPNGYLHIGHAKSICLNFGIAEDYQGLCNLRFDDTNP 81
Query: 319 EAEKKEYIDHIEEIVQWMG--WEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEI 376
E EY+D I++ V+W+G WE + Y SDYF +LY A+ELI +G AYVD +PEE+
Sbjct: 82 VKEDVEYVDSIKQDVEWLGFKWEG-EPRYASDYFDQLYGYAIELIEKGLAYVDELSPEEM 140
Query: 377 KEYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLI 432
+EYR E NSP+RDR I E+L LFE M+NG I EGKA LR K DM + M D +
Sbjct: 141 REYRGTLTEPGKNSPYRDRSIEENLALFEKMKNGEIAEGKACLRAKIDMASPFIVMRDPV 200
Query: 433 AYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL 492
YRIKF H GDKWCIYP YD+ HCI D+IE ITHSLCTLEF+ R Y W+L + +
Sbjct: 201 IYRIKFATHHQTGDKWCIYPMYDFTHCISDAIERITHSLCTLEFQDNRRLYDWVLENISI 260
Query: 493 YQ--PYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINA 550
+ P+ +E+SRLN+ +T+ SKRKL LV VDGW+DP + T++GLRRRG T S+
Sbjct: 261 ARPLPHQYEFSRLNLESTLTSKRKLLQLVNEGIVDGWNDPRMPTISGLRRRGYTPASLRE 320
Query: 551 FVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKR 610
F + IG+++ D+++ LE IRE+LN+ APR M V+NPLK+VI N SG M L A
Sbjct: 321 FCRRIGVTKQDNMVEFSALEACIREDLNENAPRAMAVINPLKIVIENF-SGKEM-LTAPN 378
Query: 611 WPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVIL 670
P+ D ++PF+ +YI+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 379 HPNR---DELGVRELPFTRELYIDQADFREEANKQYKRLVLGKEVRLRNAYVIKA-ERVE 434
Query: 671 SDDKETILHIRAEYDP 686
D +E I + YDP
Sbjct: 435 KDAEENITTVYCTYDP 450
>sp|B6EHL7|SYQ_ALISL Glutamine--tRNA ligase OS=Aliivibrio salmonicida (strain LFI1238)
GN=glnS PE=3 SV=1
Length = 552
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/455 (45%), Positives = 292/455 (64%), Gaps = 18/455 (3%)
Query: 261 KEVLDKHLEVTG-GNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 319
++++D+ L+ +V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNPE
Sbjct: 13 RQIIDEDLKSGKHSSVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPE 72
Query: 320 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 378
E EY++ I+ V+W+G++ I Y+S+YF +LY+ AVELI +G AYVD T ++I+E
Sbjct: 73 KEDIEYVESIKNDVKWLGFDWSGDIHYSSNYFDKLYDYAVELIEKGLAYVDELTSDQIRE 132
Query: 379 YR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 434
YR E NSP+RDR + E+L LFE MR+G+ +EG LR K DM + M D + Y
Sbjct: 133 YRGSLKEPGKNSPYRDRSVEENLALFEQMRDGKFKEGTICLRAKIDMASSFIVMRDPVIY 192
Query: 435 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 493
RI+F H GDKWCIYP YD+ HCI D++E ITHS+CTLEF+ R Y W+L + +
Sbjct: 193 RIRFATHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYDWVLENITIDC 252
Query: 494 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 553
QP+ +E+SRLN+ T+MSKRKLN LVT K V+GWDDP + T++GLRRRG T+ SI F +
Sbjct: 253 QPHQYEFSRLNLEYTIMSKRKLNELVTEKLVNGWDDPRMPTVSGLRRRGFTAGSIREFCK 312
Query: 554 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 613
IG+++ +++I LE IR++LN+ APR M VL P+KVVI N E G + L+ P+
Sbjct: 313 RIGVTKQENMIEFGSLESCIRDDLNENAPRAMAVLEPVKVVIENYEEGKVETLNVANHPN 372
Query: 614 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 673
+VPF+ +YIE DFR + +K Y L GK V LR A+ I+ I D+
Sbjct: 373 KP---EMGTREVPFTREIYIEQDDFREEANKKYKRLVLGKEVRLRGAYVIQANR-IEKDE 428
Query: 674 KETILHIRAEYD-------PSKKTKPKVFLSFISC 701
I I YD P+ K K + ++S
Sbjct: 429 AGNITTIFCSYDTETLGKNPADGRKVKGVIHWVSA 463
>sp|Q7MMQ4|SYQ_VIBVY Glutamine--tRNA ligase OS=Vibrio vulnificus (strain YJ016) GN=glnS
PE=3 SV=1
Length = 556
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/459 (46%), Positives = 293/459 (63%), Gaps = 18/459 (3%)
Query: 261 KEVLDKHL-EVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 319
++++DK L + +V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNPE
Sbjct: 13 RQIIDKDLADGKHTSVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGKCNLRFDDTNPE 72
Query: 320 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 378
E EY++ I+ V W+G+E +I Y+S+YF +LYE AVELI +G AYVD +PE+I+E
Sbjct: 73 KEDIEYVESIKNDVSWLGFEWDDEICYSSNYFDKLYEYAVELINKGLAYVDELSPEQIRE 132
Query: 379 YR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 434
YR SP+RDR E+L LFE MR+G EEGKA LR K DM + M D + Y
Sbjct: 133 YRGTLTAPGKPSPYRDRSAEENLALFEKMRDGGFEEGKACLRAKIDMASSFMVMRDPVLY 192
Query: 435 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 493
R++F H GDKWCIYP YD+ HCI D++E ITHS+CTLEF R Y W+L + +
Sbjct: 193 RVRFASHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFMDNRRLYDWVLDNITIDC 252
Query: 494 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 553
+P+ +E+SRLN+ TVMSKRKLN LVT K V+GWDDP + T++GLRRRG T SI F +
Sbjct: 253 RPHQYEFSRLNLEYTVMSKRKLNQLVTEKLVNGWDDPRMPTISGLRRRGFTPASIREFCK 312
Query: 554 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 613
IG+++ +++I LE IR++LN+ APR M VL+P+K+VI N +G + +L P+
Sbjct: 313 RIGVTKQENMIEFSSLESCIRDDLNENAPRAMAVLDPVKLVIENFPAGEVENLTVANHPN 372
Query: 614 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 673
+VPFS ++IE DFR + +K Y L G V LR A+ IK E + DD
Sbjct: 373 KP---EMGEREVPFSREIWIEREDFREEANKKYKRLVLGSEVRLRGAYVIK-AERVEKDD 428
Query: 674 KETILHIRAEYD-------PSKKTKPKVFLSFISCHAGI 705
+ I I YD P+ K + + ++S G+
Sbjct: 429 EGNITTIFCTYDSETLGVNPADGRKVRGVIHWVSADKGV 467
>sp|Q6LTD1|SYQ_PHOPR Glutamine--tRNA ligase OS=Photobacterium profundum GN=glnS PE=3
SV=1
Length = 555
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/459 (45%), Positives = 295/459 (64%), Gaps = 19/459 (4%)
Query: 261 KEVLDKHLEVTG-GNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 319
++++D L+ +V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNPE
Sbjct: 14 RQIIDADLDSGKHKSVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPE 73
Query: 320 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 378
E EY++ I+ V W+G++ +I Y+S+YF +LY AVELI +G AYVD +PE+++E
Sbjct: 74 KEDIEYVESIKNDVNWLGFDWSGEICYSSNYFDKLYGFAVELINKGLAYVDELSPEQMRE 133
Query: 379 YR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 434
YR E SP+RDR +AE+L+LFE M+NG +EEG +LR K DM + + D + Y
Sbjct: 134 YRGNLTEPGKPSPYRDRSVAENLELFEKMKNGEVEEGIMSLRAKIDMASSFMVLRDPVIY 193
Query: 435 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 493
R++F H GDKWCIYP YD+ HCI D++E ITHS+CTLEF+ R Y W+L + +
Sbjct: 194 RVRFATHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYDWVLDNITIDC 253
Query: 494 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 553
QP +E+SRLN+ TVMSKRKLN LVT+ V GWDDP + T++GLRRRG TS SI F +
Sbjct: 254 QPRQYEFSRLNLEYTVMSKRKLNQLVTDNLVSGWDDPRMPTVSGLRRRGFTSASIREFCK 313
Query: 554 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 613
IG+++ ++ I + LE IR++LN+ APR M VL+P+K+VI N +G L P+
Sbjct: 314 RIGVTKQENTIEMSSLESCIRDDLNENAPRAMAVLDPVKIVIENF-TGDTEVLTVSNHPN 372
Query: 614 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 673
+ +VPF+ ++IE DFR + +K Y L GK V LR A+ IK E I D
Sbjct: 373 ---NSEMGTREVPFTREIWIEREDFREEANKKYKRLVLGKEVRLRGAYVIKA-ERIEKDA 428
Query: 674 KETILHIRAEYD-------PSKKTKPKVFLSFISCHAGI 705
+ I I YD PS K K + ++S AG+
Sbjct: 429 EGNITTIFCSYDNETLGVNPSDGRKVKGVIHWVSADAGL 467
>sp|Q89KR6|SYQ_BRAJA Glutamine--tRNA ligase OS=Bradyrhizobium japonicum (strain USDA
110) GN=glnS PE=3 SV=1
Length = 558
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/421 (47%), Positives = 275/421 (65%), Gaps = 10/421 (2%)
Query: 275 VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQ 334
++TRFPPEPNGYLHIGHAK++ ++FG+A+E G C+LR+DDTNP E++EYID I+ V
Sbjct: 30 IVTRFPPEPNGYLHIGHAKSIALNFGIAQEFPGRCHLRFDDTNPVKEEQEYIDSIQADVH 89
Query: 335 WMGWEPFK-ITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYR----EKKMNSPWR 389
W+G++ K + + SDYF LYE A LIR G AYVD QT EEI+ R E NSP+R
Sbjct: 90 WLGFDWGKNLFFASDYFDRLYEWAETLIRDGLAYVDDQTQEEIRTSRGTLTEPGKNSPFR 149
Query: 390 DRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWC 449
DR + E+L LF M+ G G LR K DM N N+ D + YRI HP G+ WC
Sbjct: 150 DRSVDENLDLFRRMKAGEFPNGARVLRAKIDMAAGNINLRDPVLYRILHAHHPRTGNAWC 209
Query: 450 IYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-YQPYVWEYSRLNVSNT 508
IYPSYDYAH D+IE ITHS+CTLEFE R Y W + L + +P+ +E++RLN++ T
Sbjct: 210 IYPSYDYAHGQSDAIEGITHSICTLEFEDHRPLYDWFIEKLPVPSKPHQYEFARLNLTYT 269
Query: 509 VMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDR 568
++SKR L LV +V GWDDP + T+AG+RRRGV ++ FV+ IG+++++S++ +
Sbjct: 270 LLSKRVLTQLVREGHVAGWDDPRMPTMAGMRRRGVPPAALREFVKRIGVAKANSVVDVGM 329
Query: 569 LEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFS 628
LE+ IREELN+TA R M VL PLKVVI N G L+A PD D ++ K+ F
Sbjct: 330 LEFCIREELNRTAQRRMAVLKPLKVVIENYPEGQTEELEAINHPD---DPSAGTRKITFG 386
Query: 629 NVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSK 688
+YIE DF K ++ L+PG V LRYA+ +KCT VI ++ E ++ +R YDP+
Sbjct: 387 RELYIEQDDFMENPPKKFFRLSPGNEVRLRYAYFVKCTGVIKNESGE-VVELRCTYDPAT 445
Query: 689 K 689
+
Sbjct: 446 R 446
>sp|B7VIH6|SYQ_VIBSL Glutamine--tRNA ligase OS=Vibrio splendidus (strain LGP32) GN=glnS
PE=3 SV=1
Length = 555
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/459 (46%), Positives = 290/459 (63%), Gaps = 18/459 (3%)
Query: 261 KEVLDKHL-EVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 319
++++DK L + T +V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNPE
Sbjct: 13 RQIIDKDLADGTHSSVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPE 72
Query: 320 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 378
E EY++ I+ V W+G+E I Y+S+YF LY AVELI +G AYVD +P++I+E
Sbjct: 73 KEDVEYVESIKNDVSWLGFEWSGDICYSSNYFDTLYAYAVELINKGLAYVDELSPDQIRE 132
Query: 379 YR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 434
YR E SP+RDR E+L LFE MR+G EEGKA LR K DM + M D + Y
Sbjct: 133 YRGTLKEPGKASPYRDRSPEENLALFEKMRDGGFEEGKACLRAKIDMSSSFMVMRDPVIY 192
Query: 435 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 493
R++F H DKWCIYP YD+ HCI D++E ITHS+CTLEF+ R Y W+L + +
Sbjct: 193 RVRFAHHHQTADKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYDWVLDNITIDC 252
Query: 494 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 553
QP +E+SRLN+ TVMSKRKLN LV V+GWDDP + T++GLRRRG TS+SI F +
Sbjct: 253 QPRQYEFSRLNLEYTVMSKRKLNQLVVENLVEGWDDPRMPTISGLRRRGFTSSSIREFCK 312
Query: 554 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 613
IG+++ +++I LE IR++LN+ APR M VL+P+KVVI N ++ T+ L P+
Sbjct: 313 RIGVTKQENMIEFGSLESCIRDDLNENAPRAMAVLDPIKVVIENYDADTVETLTVANHPN 372
Query: 614 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 673
+VPF+ V+IE DFR + +K Y L GK V LR A+ IK E I D
Sbjct: 373 KP---EMGTREVPFTREVWIERDDFREEANKKYKRLVLGKEVRLRGAYVIK-AERIEKDA 428
Query: 674 KETILHIRAEYD-------PSKKTKPKVFLSFISCHAGI 705
+ I I YD P+ K K + ++S +
Sbjct: 429 EGNITTIFCSYDNETLGKNPADGRKVKGVIHWVSADKAL 467
>sp|B5YQM4|SYQ_ECO5E Glutamine--tRNA ligase OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=glnS PE=3 SV=1
Length = 554
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/440 (47%), Positives = 288/440 (65%), Gaps = 16/440 (3%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 611
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
P+ +VPFS ++I+ SDFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRSDFREEANKQYKRLVLGKEVRLRNAYVIKA-ERVEK 425
Query: 672 DDKETILHIRAEYDPSKKTK 691
D + I I YD +K
Sbjct: 426 DAEGNITTIFCTYDADTLSK 445
>sp|Q8X9H8|SYQ_ECO57 Glutamine--tRNA ligase OS=Escherichia coli O157:H7 GN=glnS PE=3
SV=3
Length = 554
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/440 (47%), Positives = 288/440 (65%), Gaps = 16/440 (3%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 611
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
P+ +VPFS ++I+ SDFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRSDFREEANKQYKRLVLGKEVRLRNAYVIKA-ERVEK 425
Query: 672 DDKETILHIRAEYDPSKKTK 691
D + I I YD +K
Sbjct: 426 DAEGNITTIFCTYDADTLSK 445
>sp|A7MQT2|SYQ_CROS8 Glutamine--tRNA ligase OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=glnS PE=3 SV=1
Length = 555
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/439 (47%), Positives = 284/439 (64%), Gaps = 13/439 (2%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + + TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTICTRFPPEPNGYLHIGHAKSICLNFGIAQDYHGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E E+++ I+ VQW+G+ + Y+SDYF +LY AVELI +G AYVD +PE+I+
Sbjct: 72 VKEDLEFVESIKNDVQWLGFHWSGDVRYSSDYFDQLYNYAVELINKGLAYVDELSPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 612
+ IG+++ D+ + + LE IRE+LN+ APR M V++P+K+VI N G H + P
Sbjct: 312 KRIGVTKQDNTVEMAALEACIREDLNENAPRAMAVIDPVKLVIENYPQG---HSEMVSMP 368
Query: 613 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 672
+ VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 369 NHPNKPEMGNRDVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKD 427
Query: 673 DKETILHIRAEYDPSKKTK 691
D I I YD +K
Sbjct: 428 DAGEITTIYCTYDAETLSK 446
>sp|A8GB43|SYQ_SERP5 Glutamine--tRNA ligase OS=Serratia proteamaculans (strain 568)
GN=glnS PE=3 SV=1
Length = 554
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/424 (48%), Positives = 275/424 (64%), Gaps = 11/424 (2%)
Query: 274 NVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIV 333
+V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP E E+++ I+ V
Sbjct: 27 SVHTRFPPEPNGYLHIGHAKSICLNFGIARDYQGQCNLRFDDTNPVKEDIEFVESIKHDV 86
Query: 334 QWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYR----EKKMNSPW 388
+W+G+E + Y+SDYF +L+ AVELI +G AYVD +PE+I+EYR +SP+
Sbjct: 87 EWLGFEWSGNVRYSSDYFDQLHNYAVELINKGLAYVDELSPEQIREYRGSLTAPGKDSPY 146
Query: 389 RDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKW 448
R R + E+L LFE MRNG EG A LR K DM + M D + YRIKF H G+KW
Sbjct: 147 RGRSVEENLALFEKMRNGEFAEGTACLRAKIDMASSFIVMRDPVLYRIKFAEHHQTGNKW 206
Query: 449 CIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-YQPYVWEYSRLNVSN 507
CIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + + P +E+SRLN+
Sbjct: 207 CIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPCHPRQYEFSRLNLEY 266
Query: 508 TVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLD 567
+MSKRKLN LVT K V+GWDDP + T++GLRRRG T+ SI F Q IG+++ D+ + +
Sbjct: 267 AIMSKRKLNLLVTEKIVEGWDDPRMPTVSGLRRRGYTAASIREFCQRIGVTKQDNNVEMM 326
Query: 568 RLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPF 627
LE IREELN+ APR M VL+P+KVVI N+ +G M P+ + +VPF
Sbjct: 327 ALEACIREELNENAPRAMAVLDPVKVVIENLTTGVEM----VTMPNHPSKPEMGSREVPF 382
Query: 628 SNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPS 687
S +YI+ +DFR + +K Y L GK V LR A+ IK E I D + I I YDP
Sbjct: 383 SRDIYIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERIEKDAEGEITTIFCSYDPD 441
Query: 688 KKTK 691
+K
Sbjct: 442 TLSK 445
>sp|Q57RP8|SYQ_SALCH Glutamine--tRNA ligase OS=Salmonella choleraesuis (strain SC-B67)
GN=glnS PE=3 SV=1
Length = 555
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 285/439 (64%), Gaps = 13/439 (2%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 612
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 613 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 672
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKD 427
Query: 673 DKETILHIRAEYDPSKKTK 691
+ I I YD +K
Sbjct: 428 AEGNITTIFCTYDADTLSK 446
>sp|Q1REN7|SYQ_ECOUT Glutamine--tRNA ligase OS=Escherichia coli (strain UTI89 / UPEC)
GN=glnS PE=3 SV=1
Length = 554
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/440 (47%), Positives = 288/440 (65%), Gaps = 16/440 (3%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 611
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA-ERVEK 425
Query: 672 DDKETILHIRAEYDPSKKTK 691
D + I I YD +K
Sbjct: 426 DAEGNITTIFCTYDADTLSK 445
>sp|Q8FJW4|SYQ_ECOL6 Glutamine--tRNA ligase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=glnS PE=3 SV=3
Length = 554
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/440 (47%), Positives = 288/440 (65%), Gaps = 16/440 (3%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 611
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA-ERVEK 425
Query: 672 DDKETILHIRAEYDPSKKTK 691
D + I I YD +K
Sbjct: 426 DAEGNITTIFCTYDADTLSK 445
>sp|Q0TK03|SYQ_ECOL5 Glutamine--tRNA ligase OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=glnS PE=3 SV=1
Length = 554
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/440 (47%), Positives = 288/440 (65%), Gaps = 16/440 (3%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 611
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA-ERVEK 425
Query: 672 DDKETILHIRAEYDPSKKTK 691
D + I I YD +K
Sbjct: 426 DAEGNITTIFCTYDADTLSK 445
>sp|A1A8U7|SYQ_ECOK1 Glutamine--tRNA ligase OS=Escherichia coli O1:K1 / APEC GN=glnS
PE=3 SV=1
Length = 554
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/440 (47%), Positives = 288/440 (65%), Gaps = 16/440 (3%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 611
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA-ERVEK 425
Query: 672 DDKETILHIRAEYDPSKKTK 691
D + I I YD +K
Sbjct: 426 DAEGNITTIFCTYDADTLSK 445
>sp|B7MPI5|SYQ_ECO81 Glutamine--tRNA ligase OS=Escherichia coli O81 (strain ED1a)
GN=glnS PE=3 SV=1
Length = 554
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/440 (47%), Positives = 288/440 (65%), Gaps = 16/440 (3%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 611
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA-ERVEK 425
Query: 672 DDKETILHIRAEYDPSKKTK 691
D + I I YD +K
Sbjct: 426 DAEGNITTIFCTYDADTLSK 445
>sp|B7MFU7|SYQ_ECO45 Glutamine--tRNA ligase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=glnS PE=3 SV=1
Length = 554
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/440 (47%), Positives = 288/440 (65%), Gaps = 16/440 (3%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 611
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA-ERVEK 425
Query: 672 DDKETILHIRAEYDPSKKTK 691
D + I I YD +K
Sbjct: 426 DAEGNITTIFCTYDADTLSK 445
>sp|B7UKW1|SYQ_ECO27 Glutamine--tRNA ligase OS=Escherichia coli O127:H6 (strain E2348/69
/ EPEC) GN=glnS PE=3 SV=1
Length = 554
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/440 (47%), Positives = 288/440 (65%), Gaps = 16/440 (3%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 611
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA-ERVEK 425
Query: 672 DDKETILHIRAEYDPSKKTK 691
D + I I YD +K
Sbjct: 426 DAEGNITTIFCTYDADTLSK 445
>sp|Q8ZQX5|SYQ_SALTY Glutamine--tRNA ligase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=glnS PE=3 SV=3
Length = 555
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 285/439 (64%), Gaps = 13/439 (2%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 612
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 613 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 672
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIKA-ERVEKD 427
Query: 673 DKETILHIRAEYDPSKKTK 691
+ I I YD +K
Sbjct: 428 AEGNITTIFCTYDADTLSK 446
>sp|B5BCC3|SYQ_SALPK Glutamine--tRNA ligase OS=Salmonella paratyphi A (strain AKU_12601)
GN=glnS PE=3 SV=1
Length = 555
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 285/439 (64%), Gaps = 13/439 (2%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 612
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 613 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 672
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIKA-ERVEKD 427
Query: 673 DKETILHIRAEYDPSKKTK 691
+ I I YD +K
Sbjct: 428 AEGNITTIFCTYDADTLSK 446
>sp|C0PWA7|SYQ_SALPC Glutamine--tRNA ligase OS=Salmonella paratyphi C (strain RKS4594)
GN=glnS PE=3 SV=1
Length = 555
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 285/439 (64%), Gaps = 13/439 (2%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 612
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 613 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 672
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIKA-ERVEKD 427
Query: 673 DKETILHIRAEYDPSKKTK 691
+ I I YD +K
Sbjct: 428 AEGNITTIFCTYDADTLSK 446
>sp|Q5PCH8|SYQ_SALPA Glutamine--tRNA ligase OS=Salmonella paratyphi A (strain ATCC 9150
/ SARB42) GN=glnS PE=3 SV=1
Length = 555
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 285/439 (64%), Gaps = 13/439 (2%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 612
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 613 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 672
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIKA-ERVEKD 427
Query: 673 DKETILHIRAEYDPSKKTK 691
+ I I YD +K
Sbjct: 428 AEGNITTIFCTYDADTLSK 446
>sp|B4TB84|SYQ_SALHS Glutamine--tRNA ligase OS=Salmonella heidelberg (strain SL476)
GN=glnS PE=3 SV=1
Length = 555
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 285/439 (64%), Gaps = 13/439 (2%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 612
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 613 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 672
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIKA-ERVEKD 427
Query: 673 DKETILHIRAEYDPSKKTK 691
+ I I YD +K
Sbjct: 428 AEGNITTIFCTYDADTLSK 446
>sp|B5R651|SYQ_SALG2 Glutamine--tRNA ligase OS=Salmonella gallinarum (strain 287/91 /
NCTC 13346) GN=glnS PE=3 SV=1
Length = 555
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 285/439 (64%), Gaps = 13/439 (2%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 612
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 613 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 672
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIKA-ERVEKD 427
Query: 673 DKETILHIRAEYDPSKKTK 691
+ I I YD +K
Sbjct: 428 AEGNITTIFCTYDADTLSK 446
>sp|B5QWD0|SYQ_SALEP Glutamine--tRNA ligase OS=Salmonella enteritidis PT4 (strain
P125109) GN=glnS PE=3 SV=1
Length = 555
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 285/439 (64%), Gaps = 13/439 (2%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 612
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 613 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 672
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIKA-ERVEKD 427
Query: 673 DKETILHIRAEYDPSKKTK 691
+ I I YD +K
Sbjct: 428 AEGNITTIFCTYDADTLSK 446
>sp|B5FNC1|SYQ_SALDC Glutamine--tRNA ligase OS=Salmonella dublin (strain CT_02021853)
GN=glnS PE=3 SV=1
Length = 555
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 285/439 (64%), Gaps = 13/439 (2%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 612
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 613 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 672
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIKA-ERVEKD 427
Query: 673 DKETILHIRAEYDPSKKTK 691
+ I I YD +K
Sbjct: 428 AEGNITTIFCTYDADTLSK 446
>sp|B5EZC3|SYQ_SALA4 Glutamine--tRNA ligase OS=Salmonella agona (strain SL483) GN=glnS
PE=3 SV=1
Length = 555
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 285/439 (64%), Gaps = 13/439 (2%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 612
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 613 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 672
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIKA-ERVEKD 427
Query: 673 DKETILHIRAEYDPSKKTK 691
+ I I YD +K
Sbjct: 428 AEGNITTIFCTYDADTLSK 446
>sp|Q83LY4|SYQ_SHIFL Glutamine--tRNA ligase OS=Shigella flexneri GN=glnS PE=3 SV=1
Length = 554
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/440 (47%), Positives = 288/440 (65%), Gaps = 16/440 (3%)
Query: 261 KEVLDKHLEVTGGNVL--TRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G ++ TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHITVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 611
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA-ERVEK 425
Query: 672 DDKETILHIRAEYDPSKKTK 691
D + I I YD +K
Sbjct: 426 DAEGNITTIFCTYDADTLSK 445
>sp|Q0T6S8|SYQ_SHIF8 Glutamine--tRNA ligase OS=Shigella flexneri serotype 5b (strain
8401) GN=glnS PE=3 SV=1
Length = 554
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/440 (47%), Positives = 288/440 (65%), Gaps = 16/440 (3%)
Query: 261 KEVLDKHLEVTGGNVL--TRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G ++ TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHITVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 611
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA-ERVEK 425
Query: 672 DDKETILHIRAEYDPSKKTK 691
D + I I YD +K
Sbjct: 426 DAEGNITTIFCTYDADTLSK 445
>sp|B4SYN9|SYQ_SALNS Glutamine--tRNA ligase OS=Salmonella newport (strain SL254) GN=glnS
PE=3 SV=1
Length = 555
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 285/439 (64%), Gaps = 13/439 (2%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 612
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 613 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 672
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIKA-ERVEKD 427
Query: 673 DKETILHIRAEYDPSKKTK 691
+ I I YD +K
Sbjct: 428 AEGNITTIFCTYDADTLSK 446
>sp|Q324M4|SYQ_SHIBS Glutamine--tRNA ligase OS=Shigella boydii serotype 4 (strain Sb227)
GN=glnS PE=3 SV=1
Length = 554
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/440 (47%), Positives = 289/440 (65%), Gaps = 16/440 (3%)
Query: 261 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 318
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 319 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 377
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 378 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 433
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 434 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 492
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 493 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 552
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 553 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 611
+ IG++R D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTRQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 612 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 671
P+ +VPFS+ ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSSEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA-ERVEK 425
Query: 672 DDKETILHIRAEYDPSKKTK 691
D + I I YD +K
Sbjct: 426 DAEGNITTIFCTYDADTLSK 445
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 286,155,595
Number of Sequences: 539616
Number of extensions: 12770952
Number of successful extensions: 58247
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 54154
Number of HSP's gapped (non-prelim): 2532
length of query: 745
length of database: 191,569,459
effective HSP length: 125
effective length of query: 620
effective length of database: 124,117,459
effective search space: 76952824580
effective search space used: 76952824580
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)