Your job contains 1 sequence.
>004549
MTGSRVQVNKSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQ
KRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSSTVSSSK
YRLRTSVLQAPHGDLVGCMEMAKVADLVAFVASASSFSEESMSYYIDSFGNQCLSVFRSL
GLPSTAVLIRDLPTDLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDELHKFLWLFKEQR
LTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLVHISGAGDFQLG
KIEILKDPFPLNARKESDAMESDEIHDLEVIRTLSPDPLKLEPLLVENVPDPLAGEQTWP
TEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIVDDSDEADSDSDNDADDGMVLDQEDR
GFPGYEGTNNSDIDDDQASLNFRYADDGTENDSVMMEGEILTREQIEDEIKKIKEAHAED
EEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVF
ANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVL
HFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVAS
IYAPICFPPLPLIVLKSADGGVAPAVAAVGSLRSIDPDRIILKKIVLTGYPQRVSKLKAI
VRYMFHNPEDVRWFKVKRALFVFVP
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004549
(745 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035893 - symbol:AT1G42440 "AT1G42440" species... 2466 3.6e-256 1
UNIPROTKB|Q5R434 - symbol:TSR1 "Pre-rRNA-processing prote... 622 1.2e-106 2
UNIPROTKB|Q2NL82 - symbol:TSR1 "Pre-rRNA-processing prote... 622 6.5e-106 2
UNIPROTKB|F1NNP8 - symbol:LOC100857289 "Uncharacterized p... 641 4.5e-105 2
UNIPROTKB|Q5XGY1 - symbol:tsr1 "Pre-rRNA-processing prote... 1017 1.3e-102 1
MGI|MGI:2144566 - symbol:Tsr1 "TSR1 20S rRNA accumulation... 590 1.8e-101 2
RGD|2322150 - symbol:Tsr1 "TSR1, 20S rRNA accumulation, h... 579 1.8e-101 2
UNIPROTKB|J9NS98 - symbol:TSR1 "Uncharacterized protein" ... 604 1.8e-99 2
UNIPROTKB|F1PXP0 - symbol:F1PXP0 "Uncharacterized protein... 592 6.8e-98 2
ZFIN|ZDB-GENE-030131-3762 - symbol:tsr1 "TSR1, 20S rRNA a... 574 1.9e-97 3
UNIPROTKB|F1MSR6 - symbol:TSR1 "Uncharacterized protein" ... 966 3.2e-97 1
UNIPROTKB|E2QYA6 - symbol:E2QYA6 "Uncharacterized protein... 603 8.9e-94 2
FB|FBgn0037073 - symbol:CG7338 species:7227 "Drosophila m... 827 1.7e-82 1
DICTYBASE|DDB_G0278331 - symbol:DDB_G0278331 "Pre-rRNA-pr... 524 1.6e-81 3
WB|WBGene00006497 - symbol:tag-151 species:6239 "Caenorha... 540 3.9e-75 2
UNIPROTKB|Q19329 - symbol:tag-151 "Pre-rRNA-processing pr... 540 3.9e-75 2
UNIPROTKB|Q61WR2 - symbol:tag-151 "Pre-rRNA-processing pr... 529 3.3e-71 2
SGD|S000002218 - symbol:TSR1 "Protein required for proces... 527 2.3e-50 1
POMBASE|SPAC23H4.15 - symbol:SPAC23H4.15 "ribosome biogen... 514 6.5e-49 1
UNIPROTKB|G4NCG9 - symbol:MGG_01087 "Ribosome biogenesis ... 388 3.3e-47 2
ASPGD|ASPL0000007982 - symbol:AN6266 species:162425 "Emer... 489 9.9e-45 1
CGD|CAL0002141 - symbol:TSR1 species:5476 "Candida albica... 330 1.8e-29 2
UNIPROTKB|Q5A346 - symbol:tsr1 "Putative uncharacterized ... 330 1.8e-29 2
GENEDB_PFALCIPARUM|PF14_0494 - symbol:PF14_0494 "hypothet... 192 1.2e-21 4
UNIPROTKB|Q8IKV7 - symbol:PF14_0494 "Ribosome biogenesis ... 192 1.2e-21 4
UNIPROTKB|F1PKN2 - symbol:BMS1 "Uncharacterized protein" ... 182 2.0e-21 2
TAIR|locus:2033050 - symbol:AT1G06720 species:3702 "Arabi... 191 2.7e-21 3
POMBASE|SPBC31E1.06 - symbol:bms1 "GTP binding protein Bm... 191 5.0e-21 3
DICTYBASE|DDB_G0287891 - symbol:bms1l "BMS1-like ribosome... 169 1.4e-20 3
UNIPROTKB|F1NH69 - symbol:BMS1 "Uncharacterized protein" ... 171 4.7e-20 3
UNIPROTKB|E9PTV4 - symbol:Bms1 "Protein Bms1" species:101... 173 5.4e-20 3
UNIPROTKB|Q14692 - symbol:BMS1 "Ribosome biogenesis prote... 173 6.9e-20 3
CGD|CAL0002359 - symbol:BMS1 species:5476 "Candida albica... 184 2.1e-19 2
UNIPROTKB|Q5A9Y0 - symbol:BMS1 "Putative uncharacterized ... 184 2.1e-19 2
SGD|S000006138 - symbol:BMS1 "GTPase required for ribosom... 174 2.1e-19 2
ASPGD|ASPL0000005995 - symbol:AN6334 species:162425 "Emer... 168 4.6e-19 3
UNIPROTKB|E1BPP2 - symbol:BMS1 "Uncharacterized protein" ... 174 4.6e-19 3
WB|WBGene00022021 - symbol:Y61A9LA.10 species:6239 "Caeno... 182 1.3e-18 3
ZFIN|ZDB-GENE-060720-2 - symbol:bms1l "BMS1-like, ribosom... 155 1.8e-15 3
FB|FBgn0036686 - symbol:CG7728 species:7227 "Drosophila m... 143 6.2e-13 3
GENEDB_PFALCIPARUM|PFA0330w - symbol:AARP2 "pfAARP2 prote... 146 5.3e-10 3
UNIPROTKB|Q8I275 - symbol:AARP2 "PfAARP2 protein" species... 146 5.3e-10 3
UNIPROTKB|F1RG23 - symbol:BMS1 "Uncharacterized protein" ... 159 2.7e-08 1
UNIPROTKB|I3LND5 - symbol:BMS1 "Uncharacterized protein" ... 155 2.2e-07 1
RGD|1308043 - symbol:Bms1 "BMS1 homolog, ribosome assembl... 140 3.2e-06 1
>TAIR|locus:2035893 [details] [associations]
symbol:AT1G42440 "AT1G42440" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0042254
InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177 HOGENOM:HOG000165026
KO:K14799 OMA:DAEQTWP EMBL:AF361826 EMBL:AY133551 EMBL:BT000755
IPI:IPI00527453 RefSeq:NP_564480.1 UniGene:At.19120
UniGene:At.67019 ProteinModelPortal:Q9ASU6 IntAct:Q9ASU6
STRING:Q9ASU6 PaxDb:Q9ASU6 PRIDE:Q9ASU6 EnsemblPlants:AT1G42440.1
GeneID:840848 KEGG:ath:AT1G42440 TAIR:At1g42440 InParanoid:Q9ASU6
PhylomeDB:Q9ASU6 ProtClustDB:CLSN2688391 ArrayExpress:Q9ASU6
Genevestigator:Q9ASU6 Uniprot:Q9ASU6
Length = 793
Score = 2466 (873.1 bits), Expect = 3.6e-256, P = 3.6e-256
Identities = 478/737 (64%), Positives = 564/737 (76%)
Query: 1 MTGSRVQVNKSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQ 60
M SRVQVNK+HK+RFS+KSSRNLH+T +D RIGKSD N KGAKAARVQR KMLR+Q
Sbjct: 1 MGRSRVQVNKAHKTRFSSKSSRNLHRTNLQDSGRIGKSDSNYVKGAKAARVQRGKMLREQ 60
Query: 61 KRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSSTVSSSK 120
KR A+LKEKRAS GI S PRVIVLF LSASV LNS+ ED+L+ LSS+G+G SSTV+SS+
Sbjct: 61 KRAAVLKEKRASGGINSAPRVIVLFPLSASVELNSLGEDVLKLLSSDGSGIASSTVASSE 120
Query: 121 YRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRSL 180
Y+LR +VL+APHGDL+ CMEMAKVADL S +IDSFG+QCLSVFRS+
Sbjct: 121 YKLRATVLKAPHGDLLTCMEMAKVADLMAFVASASAPWEENSSNFIDSFGSQCLSVFRSI 180
Query: 181 GLPSTAVLIRDLPTDLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDELHKFLWLFKEQR 240
GLPST VLIRDLP+D+KK+ ++KKMC S L SEFPEDCKFY ADT+DELHKF+WLFK QR
Sbjct: 181 GLPSTTVLIRDLPSDVKKKNEMKKMCASQLASEFPEDCKFYPADTRDELHKFMWLFKAQR 240
Query: 241 LTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLVHISGAGDFQLG 300
LTVPHWR+QR +++A+K ++ DD +SGKCTLLL GYLRA LSVNQLVH+SG GDFQ
Sbjct: 241 LTVPHWRSQRSYIVARKAGMLVDDESSGKCTLLLSGYLRARKLSVNQLVHVSGVGDFQFS 300
Query: 301 KIEILKDPFPLNARKESDAMESDEIHDLEVIRTLSPDPLKLEPLLVENVPDPLAGEQTWP 360
KIE+LKDPFPLN RK ++ME D+ HD EV+++L PDP+K EPL++EN PDPLAGEQTWP
Sbjct: 301 KIEVLKDPFPLNERKNQNSMELDDSHDEEVLKSLVPDPMKQEPLVIENTPDPLAGEQTWP 360
Query: 361 TEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIVXXXXXXXXXXXXXXXXGMVLDQ-ED 419
TE EMAEAD+NQK + KK+ LPRGTSEYQAAWIV GMVLD+ ED
Sbjct: 361 TEEEMAEADKNQKQGRLKKKTLPRGTSEYQAAWIVDETDEEDSDNGDSDDNGMVLDRGED 420
Query: 420 RGFPGYEGTNNSDIDDDQASLNFRYADDGTENDSVMMEGEILTRXXXXXXXXXXXXXXXX 479
EG + + +DD SLN R D T+N+S M++ E LT
Sbjct: 421 SN---QEGMYDQEFEDDGKSLNLRDIDTETQNESEMVDDEDLTEEQIKDEIKKIKEAYAD 477
Query: 480 XXXFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHV 539
FPDEV+TP+DVPAR+RFAKYRGLKSFRTSSWDP ESLP +YARIFAFD RTQK V
Sbjct: 478 DEEFPDEVETPIDVPARRRFAKYRGLKSFRTSSWDPNESLPQDYARIFAFDNVARTQKLV 537
Query: 540 FANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAERS-PLIASGLLQHESKMS 598
ALKME+E+ DD VP YVRLHIKEVP G A +L + + P+I GLLQHESKMS
Sbjct: 538 LKQALKMEEEDRDDCVPIGSYVRLHIKEVPLGAASKLSSLVNTTKPIIGFGLLQHESKMS 597
Query: 599 VLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSV 658
VLHFSVKK+D Y+APIK KEEL+FHVGFRQF+ARP+F++DN +SDKHKMERFLH GCFS+
Sbjct: 598 VLHFSVKKYDGYEAPIKTKEELMFHVGFRQFIARPVFATDNFSSDKHKMERFLHPGCFSL 657
Query: 659 ASIYAPICFPPLPLIVLKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLK 718
ASIY PI FPPLPL+VLK SL+S++P++IILKKI+LTGYPQRVSK+K
Sbjct: 658 ASIYGPISFPPLPLVVLKISEGSDPPAIAALGSLKSVEPNKIILKKIILTGYPQRVSKMK 717
Query: 719 AIVRYMFHNPEDVRWFK 735
A VRYMFHNPEDV+WFK
Sbjct: 718 ASVRYMFHNPEDVKWFK 734
>UNIPROTKB|Q5R434 [details] [associations]
symbol:TSR1 "Pre-rRNA-processing protein TSR1 homolog"
species:9601 "Pongo abelii" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 GO:GO:0005730 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 KO:K14799 CTD:55720
HOVERGEN:HBG099515 EMBL:CR861426 RefSeq:NP_001127041.1
UniGene:Pab.787 GeneID:100174068 KEGG:pon:100174068 Uniprot:Q5R434
Length = 805
Score = 622 (224.0 bits), Expect = 1.2e-106, Sum P(2) = 1.2e-106
Identities = 127/253 (50%), Positives = 162/253 (64%)
Query: 483 FPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFAN 542
FPDEVDTP DV AR RF KYRGLKSFRTS WDPKE+LP +YARIF F FT T+K +F
Sbjct: 485 FPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKE 544
Query: 543 ALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHF 602
+ E E + YV LH+ EVP + C + +PLIA LL HE KMSVL+
Sbjct: 545 VEEKEVEGAE----VGCYVTLHVSEVPVSVVE--C-FRQGTPLIAFSLLPHEQKMSVLNM 597
Query: 603 SVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASIY 662
V++ P+KAKEELIFH GFR+F A P+FS +DKHK++RFL A VA++Y
Sbjct: 598 VVRRDPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTA-ADKHKLQRFLTADMALVATVY 656
Query: 663 APICFPPLPLIVLKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVR 722
API FPP +++ K L S+DPDR+++K++VL+G+P ++ A+VR
Sbjct: 657 APITFPPASVLLFKQKSNGMHSLIATGH-LMSVDPDRMVIKRVVLSGHPLKMFTKMAVVR 715
Query: 723 YMFHNPEDVRWFK 735
YMF N EDV WFK
Sbjct: 716 YMFFNREDVLWFK 728
Score = 453 (164.5 bits), Expect = 1.2e-106, Sum P(2) = 1.2e-106
Identities = 140/416 (33%), Positives = 209/416 (50%)
Query: 3 GSRVQVNKSHKSRFSTKSSRNLHKTAAKD-KSRIGKSDCNVAKGAKAARV-QRNK--MLR 58
G+ Q NK+HK R +A +D K R+ + + +RV QR++ LR
Sbjct: 7 GTLKQQNKAHKG--GRHRGRG---SAQRDGKGRLALKTLSKKVRKELSRVDQRHRASQLR 61
Query: 59 DQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSSTVSS 118
QK+ A+L EKR G PP +++ L + ++L + L Q GT L+ ++
Sbjct: 62 KQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISLPEAMQ--LLQDRDTGTVHLNELGNT 119
Query: 119 SKYRL-------RTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGN 171
+ L R A GDL ++MAKVAD DS G+
Sbjct: 120 QSFMLLCPRLKHRWFFTSARPGDLHIVLDMAKVADTILFLLDPLEGW--------DSTGD 171
Query: 172 QCLSVFRSLGLPSTAVLIRDLP-TDLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDELH 230
CLS + GLP+ + ++ + LKK+ D +K ++ FP D K DT+ E
Sbjct: 172 YCLSCLFAQGLPTYTLAVQGISGLPLKKQIDARKKLSKAVEKRFPHD-KLLLLDTQQEAG 230
Query: 231 KFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLVH 290
L Q+ +R++R +L A+ VD VA + N+ TL + GY+R L+VN+L+H
Sbjct: 231 MLLRQLANQKQQHLAFRDRRAYLFARAVDFVASEENNLVGTLKISGYVRGQTLNVNRLLH 290
Query: 291 ISGAGDFQLGKIEILKDPFPLNAR-----KESD-AME---SDEIHDLEV-IRTL-SPDPL 339
I G GDFQ+ +I+ DPFPLN R K+ D AME +D + D+E ++ L DP
Sbjct: 291 IVGHGDFQMKQIDAPGDPFPLNPRGIKPQKDPDMAMEICATDTVDDMEEGLKVLMKADPD 350
Query: 340 KLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIV 395
+ E L E +PDP+ GEQTWPTE E++EA K + + +P+GTS YQA WI+
Sbjct: 351 RQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWIL 406
>UNIPROTKB|Q2NL82 [details] [associations]
symbol:TSR1 "Pre-rRNA-processing protein TSR1 homolog"
species:9606 "Homo sapiens" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 EMBL:CH471108 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP EMBL:AB037822
EMBL:BC019090 EMBL:BC110851 EMBL:BC126110 EMBL:AK001396
IPI:IPI00292894 RefSeq:NP_060598.3 UniGene:Hs.388170
ProteinModelPortal:Q2NL82 IntAct:Q2NL82 MINT:MINT-4860330
STRING:Q2NL82 PhosphoSite:Q2NL82 DMDM:121948971 PaxDb:Q2NL82
PeptideAtlas:Q2NL82 PRIDE:Q2NL82 DNASU:55720
Ensembl:ENST00000301364 GeneID:55720 KEGG:hsa:55720 UCSC:uc002fuj.3
CTD:55720 GeneCards:GC17M002225 HGNC:HGNC:25542 HPA:HPA024434
MIM:611214 neXtProt:NX_Q2NL82 PharmGKB:PA142670691
HOVERGEN:HBG099515 InParanoid:Q2NL82 OrthoDB:EOG4MKNFQ
GenomeRNAi:55720 NextBio:60619 PMAP-CutDB:Q2NL82 Bgee:Q2NL82
CleanEx:HS_TSR1 Genevestigator:Q2NL82 Uniprot:Q2NL82
Length = 804
Score = 622 (224.0 bits), Expect = 6.5e-106, Sum P(2) = 6.5e-106
Identities = 127/253 (50%), Positives = 162/253 (64%)
Query: 483 FPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFAN 542
FPDEVDTP DV AR RF KYRGLKSFRTS WDPKE+LP +YARIF F FT T+K +F
Sbjct: 484 FPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKE 543
Query: 543 ALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHF 602
+ E E + YV LH+ EVP + C + +PLIA LL HE KMSVL+
Sbjct: 544 VEEKEVEGAE----VGWYVTLHVSEVPVSVVE--C-FRQGTPLIAFSLLPHEQKMSVLNM 596
Query: 603 SVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASIY 662
V++ P+KAKEELIFH GFR+F A P+FS +DKHK++RFL A VA++Y
Sbjct: 597 VVRRDPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTA-ADKHKLQRFLTADMALVATVY 655
Query: 663 APICFPPLPLIVLKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVR 722
API FPP +++ K L S+DPDR+++K++VL+G+P ++ A+VR
Sbjct: 656 APITFPPASVLLFKQKSNGMHSLIATGH-LMSVDPDRMVIKRVVLSGHPFKIFTKMAVVR 714
Query: 723 YMFHNPEDVRWFK 735
YMF N EDV WFK
Sbjct: 715 YMFFNREDVLWFK 727
Score = 446 (162.1 bits), Expect = 6.5e-106, Sum P(2) = 6.5e-106
Identities = 139/416 (33%), Positives = 206/416 (49%)
Query: 3 GSRVQVNKSHKSRFSTKSSRNLHKTAAKD-KSRIGKSDCNVAKGAKAARV-QRNK--MLR 58
G Q NK+HK R +A +D K R+ + + +RV QR++ LR
Sbjct: 7 GPLKQQNKAHKG--GRHRGRG---SAQRDGKGRLALKTLSKKVRKELSRVDQRHRASQLR 61
Query: 59 DQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSSTVSS 118
QK+ A+L EKR G PP +++ L + ++L + L Q GT L+ ++
Sbjct: 62 KQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISLPEAMQ--LLQDRDTGTVHLNELGNT 119
Query: 119 SKYRL-------RTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGN 171
+ L R A GDL ++MAKVAD DS G+
Sbjct: 120 QNFMLLCPRLKHRWFFTSARPGDLHVVLDMAKVADTILFLLDPLEGW--------DSTGD 171
Query: 172 QCLSVFRSLGLPSTAVLIRDLP-TDLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDELH 230
CLS + GLP+ + ++ + LKK+ D +K ++ FP D K DT+ E
Sbjct: 172 YCLSCLFAQGLPTYTLAVQGISGLPLKKQIDTRKKLSKAVEKRFPHD-KLLLLDTQQEAG 230
Query: 231 KFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLVH 290
L Q+ +R++R +L A VD V + N+ TL + GY+R L+VN+L+H
Sbjct: 231 MLLRQLANQKQQHLAFRDRRAYLFAHAVDFVPSEENNLVGTLKISGYVRGQTLNVNRLLH 290
Query: 291 ISGAGDFQLGKIEILKDPFPLNAR-----KESD-AME---SDEIHDLEV-IRTL-SPDPL 339
I G GDFQ+ +I+ DPFPLN R K+ D AME +D + D+E ++ L DP
Sbjct: 291 IVGYGDFQMKQIDAPGDPFPLNPRGIKPQKDPDMAMEICATDAVDDMEEGLKVLMKADPG 350
Query: 340 KLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIV 395
+ E L E +PDP+ GEQTWPTE E++EA K + + +P+GTS YQA WI+
Sbjct: 351 RQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWIL 406
>UNIPROTKB|F1NNP8 [details] [associations]
symbol:LOC100857289 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:AADN02025881 IPI:IPI00574494 Ensembl:ENSGALT00000005046
Uniprot:F1NNP8
Length = 803
Score = 641 (230.7 bits), Expect = 4.5e-105, Sum P(2) = 4.5e-105
Identities = 131/253 (51%), Positives = 166/253 (65%)
Query: 483 FPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFAN 542
FPDEVDTP DVPAR RF KYRGLKSFRTS WDPKE+LP +YARI+ F F+RT+K++F
Sbjct: 483 FPDEVDTPRDVPARVRFQKYRGLKSFRTSPWDPKENLPRDYARIYQFQDFSRTRKNIFRQ 542
Query: 543 ALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHF 602
K E E SV YV LH+ VP + E PL+ LL HE KMSVL+F
Sbjct: 543 IEKEETEGA--SV--GWYVTLHVCNVPVSVME---SFKEGKPLVLFSLLPHEQKMSVLNF 595
Query: 603 SVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASIY 662
V++H + P+KAKEELIFH GFR+F A P+FS + ++DKHK+ERFL V ++Y
Sbjct: 596 LVRRHPSNSDPVKAKEELIFHCGFRRFRASPLFSQ-HTSADKHKLERFLRLDAALVVTVY 654
Query: 663 APICFPPLPLIVLKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVR 722
API FPP ++V K SL ++DPDRII+K++VL+G+P ++ A+VR
Sbjct: 655 APITFPPASVLVFKQRSNGMHDLIATG-SLLAVDPDRIIIKRLVLSGHPFKIFTKAAVVR 713
Query: 723 YMFHNPEDVRWFK 735
YMF N EDV WFK
Sbjct: 714 YMFFNREDVMWFK 726
Score = 419 (152.6 bits), Expect = 4.5e-105, Sum P(2) = 4.5e-105
Identities = 136/420 (32%), Positives = 203/420 (48%)
Query: 3 GSRVQVNKSHKS--RFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQ 60
G Q NK+HK T R+ + + K + D N + R + LR Q
Sbjct: 4 GPLKQQNKAHKGGKHRGTAQRRSGGRVSVKALPHRRRRDLN-----RVDRRHQALQLRRQ 58
Query: 61 KRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGAL-------- 112
++ A+L EKR+ PP ++V+ L A + D LR L S+ + +
Sbjct: 59 RKEAVLAEKRSLGSRDGPPHLVVVVPLHA----RAAAHDGLRLLQSQDSAVVHVDEGKAG 114
Query: 113 SSTVSSSKYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQ 172
S + + + R + A GDL M++AKVAD M + DS G
Sbjct: 115 SFAILCPRLKQRWRFVTAQAGDLHAVMDLAKVAD-------SLLFVLDPMDGW-DSTGEH 166
Query: 173 CLSVFRSLGLPSTAVLI---RDLPTDLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDEL 229
CLS + GLPS A+ + DLP KKR D KK ++ FPE K + +T+ E
Sbjct: 167 CLSCLFAQGLPSYALAVPGGTDLPP--KKRIDAKKKVAKAIEKWFPE-VKLFPLNTEQES 223
Query: 230 HKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLV 289
L Q+ +R++R ++A + V + TL + G++R L+VN LV
Sbjct: 224 SVLLRHLATQKQRHLAFRDRRAHMLAYAAEFVPSQESDQVGTLKVSGFVRGQTLNVNSLV 283
Query: 290 HISGAGDFQLGKIEILKDPFPLNAR-----KESDAME--------SDEIH-DLEVIRTLS 335
HI G GDFQ+ +++ DP LN R K+S M+ +DE+ D++++ +
Sbjct: 284 HIVGHGDFQMSQVDAPPDPLSLNPRVVKGQKKSQGMDVQEDSANGTDEMEEDVKIL--MK 341
Query: 336 PDPLKLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIV 395
D K E L E VPDP+ GEQTWPTE E+ EA+ +QK K+ + +P+GTS+YQAAWIV
Sbjct: 342 ADASKQESLQSEVVPDPMEGEQTWPTEEELQEAEASQKENKRVVK-VPKGTSKYQAAWIV 400
>UNIPROTKB|Q5XGY1 [details] [associations]
symbol:tsr1 "Pre-rRNA-processing protein TSR1 homolog"
species:8355 "Xenopus laevis" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 GO:GO:0005730 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 KO:K14799 CTD:55720
HOVERGEN:HBG099515 EMBL:BC084296 RefSeq:NP_001088282.1
UniGene:Xl.8091 ProteinModelPortal:Q5XGY1 PRIDE:Q5XGY1
GeneID:495115 KEGG:xla:495115 Xenbase:XB-GENE-5753645
Uniprot:Q5XGY1
Length = 815
Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
Identities = 277/765 (36%), Positives = 391/765 (51%)
Query: 3 GSRVQVNKSHKS-RFSTKSSR---NLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLR 58
G+ Q NK HKS R + ++ N + AAK + K D K R + +R
Sbjct: 13 GAYKQQNKPHKSGRHRGRGAQDRENKGRVAAKILGKKNKKDLR-----KLDRRHKANQIR 67
Query: 59 DQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQL-SSEG-----TGAL 112
Q++ A+L EKR+ PP +++ L A +V++DL + ++EG +
Sbjct: 68 RQRKDAVLAEKRSLGTKDGPPHLVIAISLHA----RAVKDDLFSLVQNNEGDILHVNDQI 123
Query: 113 SSTVS--SSKYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFG 170
++ K + R +QA DL +++AKVAD DS+G
Sbjct: 124 KGLLALVCPKVKQRWCFIQANRDDLCSLLDLAKVADTLLFLLDPQEGW--------DSYG 175
Query: 171 NQCLSVFRSLGLPSTAVLIRDLP-TDLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDEL 229
+ CLS + GLPS + ++ + +KKR D+KK + + F D K + DT+ E
Sbjct: 176 DYCLSCLFAQGLPSYVLAVQGMNYIPIKKRADIKKQLSKVIENRFT-DAKLFQLDTEQEA 234
Query: 230 HKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKC-TLLLHGYLRAHCLSVNQL 288
+ Q+ +R++R +++AQ+ D D SG TL L GY+R L+VN+L
Sbjct: 235 AVLIRQISTQKQRHLAFRSRRSYMLAQRADFQPTD-ESGLVGTLKLSGYVRGQELNVNRL 293
Query: 289 VHISGAGDFQLGKIEILKDPFPLNAR------KESDAME-SDEI---HDLEV-IRTL-SP 336
VHI G GDF + +I+ DP+PLN R K ME SDE ++E I+ L
Sbjct: 294 VHIVGHGDFHMSQIDAPPDPYPLNPRVHKPKTKSGQDMEMSDEPATGSEMEQDIKVLMKA 353
Query: 337 DPLKLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIVX 396
DP E L E VPDP+ GEQTWPTE E+ EA+ K + + +P+GTS YQAAWI+
Sbjct: 354 DPSAQESLQCEVVPDPMEGEQTWPTEEELKEAEDALKGTSKVVKKVPKGTSAYQAAWILD 413
Query: 397 XXXXXXXXXXXXXXXGMVLDQEDRGFPGY----EGTNNSDIDDDQA-SLNFRYADDG-TE 450
M D ED Y +G+ N + ++ + ++ DD E
Sbjct: 414 DEGDGEEESDDDDDEDMEEDAEDAMDDAYSEEEDGSGNEEAEESETLTIPDSTRDDKYDE 473
Query: 451 NDSVMMEGEILTRXXXXXXXXXXXXXXXXXXXFPDEVDTPLDVPARKRFAKYRGLKSFRT 510
N E ++L + FPDEVDTP D AR RF KYRGLKSFRT
Sbjct: 474 NVDEQEEEQMLEKYKLQRQDEV----------FPDEVDTPRDQIARIRFQKYRGLKSFRT 523
Query: 511 SSWDPKESLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPA 570
S WD KE+LP +YARIF F F RT+K VF E+E D+ YV +HI VP
Sbjct: 524 SPWDVKENLPRDYARIFQFHDFFRTRKRVFK-----EEEEKDEGAMVGWYVTVHISAVPV 578
Query: 571 GIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFV 630
+ PL+ LL HE KMSV++ V++H + PIKAKEELIFH GFR+F
Sbjct: 579 SVMEHF---KHGLPLVLCSLLPHEQKMSVMNMLVRRHPGNNEPIKAKEELIFHCGFRRFR 635
Query: 631 ARPIFSSDNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLKSXXXXXXXXXXXXX 690
A P+FS + ++DKHK ERFL + V ++YAPI FPP ++V K
Sbjct: 636 ASPLFSQHS-SADKHKSERFLRSDTSVVVTVYAPITFPPASVLVFKQRYNGMQDLVATG- 693
Query: 691 SLRSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFK 735
SL +++PDRI++K+IVL+G+P ++ K A+VRYMF N EDV WFK
Sbjct: 694 SLLNVNPDRIVIKRIVLSGHPFKIMKRTAVVRYMFFNREDVLWFK 738
>MGI|MGI:2144566 [details] [associations]
symbol:Tsr1 "TSR1 20S rRNA accumulation" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 MGI:MGI:2144566 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 EMBL:AL604066
UniGene:Mm.220843 eggNOG:COG5177 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 CTD:55720 HOVERGEN:HBG099515
OrthoDB:EOG4MKNFQ EMBL:AK030545 EMBL:AK134365 EMBL:AK154063
EMBL:AK162686 EMBL:AK165662 EMBL:BC031531 EMBL:AK129350
IPI:IPI00420546 IPI:IPI00875206 IPI:IPI00875360 RefSeq:NP_796299.2
ProteinModelPortal:Q5SWD9 IntAct:Q5SWD9 STRING:Q5SWD9
PhosphoSite:Q5SWD9 PaxDb:Q5SWD9 PRIDE:Q5SWD9
Ensembl:ENSMUST00000045807 GeneID:104662 KEGG:mmu:104662
UCSC:uc007kcm.1 UCSC:uc007kcn.1 UCSC:uc007kco.1 InParanoid:Q5SWD9
NextBio:357196 Bgee:Q5SWD9 CleanEx:MM_TSR1 Genevestigator:Q5SWD9
Uniprot:Q5SWD9
Length = 803
Score = 590 (212.7 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 121/253 (47%), Positives = 158/253 (62%)
Query: 483 FPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFAN 542
FPDE+DTP DV AR RF KYRGLKSFRTS WDPKE+LP +YARIF F F T+K +F
Sbjct: 483 FPDEMDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPRDYARIFQFQNFVNTRKRIFKE 542
Query: 543 ALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHF 602
+ E E + YV LH+ +VP + + A PLIA LL +E KMSVL+
Sbjct: 543 IEEKEAEGAE----VGWYVTLHVSDVPVSVVEYFRQGA---PLIAFSLLPYEQKMSVLNM 595
Query: 603 SVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASIY 662
V ++ P+KAKEELIFH GFR+F A P+FS +DKHK +RFL A V +++
Sbjct: 596 VVSRNPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTA-ADKHKFQRFLTADAAFVVTVF 654
Query: 663 APICFPPLPLIVLKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVR 722
API FPP +++ K L S+DPDR+++K++VL+G+P ++ A+VR
Sbjct: 655 APITFPPASVLLFKQRRNGMHSLIATGH-LFSVDPDRMVIKRVVLSGHPFKIFTKMAVVR 713
Query: 723 YMFHNPEDVRWFK 735
YMF N EDV WFK
Sbjct: 714 YMFFNREDVMWFK 726
Score = 436 (158.5 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 142/418 (33%), Positives = 204/418 (48%)
Query: 2 TGSRVQVNKSHKSRFSTKSSRNLHKTAAKD-KSRIG-KSDCNVAKGAKAARV-QRNK--M 56
+G Q NK+HK + +A +D K R+G K C K + +R+ QR++
Sbjct: 6 SGPLKQQNKAHKG-----GRHHGGGSAQRDSKGRVGPKILCKKLK-RQLSRIDQRHRASQ 59
Query: 57 LRDQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSSTV 116
LR QKR ++L EKR PP +++ L + ++L + L Q GT LS
Sbjct: 60 LRKQKRESVLAEKRQLGSKDGPPHQVLVVPLHSRISLPEAFK--LLQNEDLGTVYLSERG 117
Query: 117 SSSKYRLRTSVLQ-------APHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSF 169
S+ + L L+ A GDL ++MAKVAD DS
Sbjct: 118 STQSFMLLCPSLKHRWFFTYARPGDLHTLLDMAKVADTILFLLDPLEGW--------DST 169
Query: 170 GNQCLSVFRSLGLPSTAVLIRDLPT-DLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDE 228
G+ CLS + GLP+ + ++ L KK+ D +K + FPED K DT+ E
Sbjct: 170 GDYCLSCLFAQGLPTYTLAVQGLSGFPPKKQIDARKKLSKMVEKRFPED-KLLLLDTQQE 228
Query: 229 LHKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQL 288
L Q+ +R++R +L A D V + + TL + GY+R L+VN L
Sbjct: 229 SGMLLRQLANQKQRHLAFRDRRAYLFAHVADFVPSEESDLVGTLKISGYVRGRTLNVNSL 288
Query: 289 VHISGAGDFQLGKIEILKDPFPLNAR------KESDAME---SDEIHDLEV-IRTL-SPD 337
+HI G GDFQ+ +I+ DPFPLN R K + AME +D D+E ++ L D
Sbjct: 289 LHIVGHGDFQMNQIDAPVDPFPLNPRVIKSQKKPNMAMEVCVTDAAPDMEEDLKVLMKAD 348
Query: 338 PLKLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIV 395
P E L E +PDP+ GEQTWPTE E+ EAD K R + + +P+GTS YQA WI+
Sbjct: 349 PDHQESLQTEAIPDPMEGEQTWPTEEELDEADDLLKQRSRVVKKVPKGTSSYQAEWIL 406
>RGD|2322150 [details] [associations]
symbol:Tsr1 "TSR1, 20S rRNA accumulation, homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
RGD:2322150 GO:GO:0005634 GO:GO:0042254 EMBL:CH473948
InterPro:IPR007034 Pfam:PF04950 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 CTD:55720 OrthoDB:EOG4MKNFQ
IPI:IPI00370294 RefSeq:XP_002724564.1 RefSeq:XP_002727820.1
UniGene:Rn.101331 Ensembl:ENSRNOT00000003992 GeneID:100360406
KEGG:rno:100360406 Uniprot:D3ZEM8
Length = 804
Score = 579 (208.9 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 118/253 (46%), Positives = 156/253 (61%)
Query: 483 FPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFAN 542
FPDE+DTP DV AR RF KYRGLKSFRTS WDPKE+LP +YARIF F F T+K +F
Sbjct: 484 FPDEMDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPRDYARIFQFQNFVNTRKRIFKE 543
Query: 543 ALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHF 602
+ E E + YV LH+ VP + + +PLIA LL +E KMSVL+
Sbjct: 544 IEEKETEGAE----VGWYVTLHVSNVPVSVVE---SFRQGAPLIAFSLLPYEQKMSVLNM 596
Query: 603 SVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASIY 662
V + P+KAKEELIFH GFR+F A P+FS +DKHK +RFL A V +++
Sbjct: 597 VVSRSPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTA-ADKHKFQRFLTADAALVVTVF 655
Query: 663 APICFPPLPLIVLKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVR 722
API FPP +++ K L S+DPDR+++K++VL+G+P ++ A+VR
Sbjct: 656 APITFPPASVLLFKQRRNGMHSLIATGH-LFSVDPDRMVIKRVVLSGHPFKIFTKTAVVR 714
Query: 723 YMFHNPEDVRWFK 735
YMF + +DV WFK
Sbjct: 715 YMFFSRDDVLWFK 727
Score = 447 (162.4 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 142/416 (34%), Positives = 205/416 (49%)
Query: 2 TGSRVQVNKSHKSRFSTKSSRNLHKTAAKD-KSRIG-KSDCNVAKGAKAARV-QRNK--M 56
+G Q NK+HK + +A +D K R+G K C K + +RV QR++
Sbjct: 6 SGPLKQQNKAHKG-----GRHHGGGSAQRDSKGRVGPKILCKKLK-KQLSRVDQRHRASQ 59
Query: 57 LRDQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSV-----REDLLRQLSSEGTGA 111
LR QKR A+L EKR PP +++ L + L EDL +E
Sbjct: 60 LRKQKREAVLAEKRQLGSKDGPPHQVLVVPLHNRICLPEAFKLLQNEDLGTVYLNERGST 119
Query: 112 LSSTVSSSKYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGN 171
S + S + R S A GDL ++MAKVAD DS G+
Sbjct: 120 HSFMLLSPSLKHRWSFTYARPGDLHTLLDMAKVADTILFLLDPLEGW--------DSTGD 171
Query: 172 QCLSVFRSLGLPSTAVLIRDLPTDLKKRK-DLKKMCISSLTSEFPEDCKFYAADTKDELH 230
CLS + GLP+ + ++ LP+ KR+ D +K ++ FPED K DT+ E
Sbjct: 172 YCLSCLFAQGLPTYMLAVQGLPSLPPKRQTDARKKLNKTVEKRFPED-KLLLLDTQQESG 230
Query: 231 KFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLVH 290
L Q+ +R++R +L A D + + + TL + GY+R L+VN L+H
Sbjct: 231 MLLRQLANQKQRHLAFRDRRAYLFAHDADFMPSEESDLVGTLKISGYIRGRTLNVNSLLH 290
Query: 291 ISGAGDFQLGKIEILKDPFPLNAR------KESDAME---SDEIHDLEV-IRTL-SPDPL 339
I G GDFQ+ +I+ DPFPLN R K S +ME +D D+E ++ L DP
Sbjct: 291 IVGHGDFQMNQIDAPVDPFPLNPRVVKSQKKPSMSMEVCVTDAAADMEEGLKVLMKADPD 350
Query: 340 KLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIV 395
+ E L E +PDP+ GEQTWPTE E+ EA+ + K R + + +P+GTS YQA WI+
Sbjct: 351 QQETLQTEVIPDPMEGEQTWPTEEELDEANDSLKQRSRVVKKVPKGTSNYQAEWIL 406
>UNIPROTKB|J9NS98 [details] [associations]
symbol:TSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 KO:K14799 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:AAEX03008382 RefSeq:XP_852531.1 Ensembl:ENSCAFT00000003327
GeneID:610048 KEGG:cfa:610048 Uniprot:J9NS98
Length = 801
Score = 604 (217.7 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 126/254 (49%), Positives = 160/254 (62%)
Query: 483 FPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFAN 542
FPDE+DTP DV AR RF KYRGLKSFRTS WDPKE+LP +YARIF F FT T+K +F
Sbjct: 481 FPDEIDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKRIFKE 540
Query: 543 ALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAER-SPLIASGLLQHESKMSVLH 601
+ E E + YV LH+ EVP + E +R +PLIA LL HE KMSVL+
Sbjct: 541 IEEKEVEGAE----VGWYVTLHVSEVPLSVV----EYFKRGAPLIAFSLLPHEQKMSVLN 592
Query: 602 FSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASI 661
V +H P+KAKE+LIFH GFR+F A P+FS +DKHK +RFL A V +I
Sbjct: 593 MVVSRHPGNIEPVKAKEDLIFHCGFRRFRASPLFSQHTA-ADKHKFQRFLTADVALVVTI 651
Query: 662 YAPICFPPLPLIVLKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIV 721
Y PI FPP +++ K L S+DPDR+++K+IVL+G+P ++ A+V
Sbjct: 652 YGPITFPPASVLLFKQNSNGMHSLIATGYLL-SVDPDRMVIKRIVLSGHPFKIFTKMAVV 710
Query: 722 RYMFHNPEDVRWFK 735
RYMF + EDV WFK
Sbjct: 711 RYMFFSREDVLWFK 724
Score = 403 (146.9 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 133/416 (31%), Positives = 194/416 (46%)
Query: 2 TGSRVQVNKSHKS-RFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQ 60
+G Q NK+HK R + S K S+ + + + K + R LR Q
Sbjct: 6 SGPLKQQNKAHKGGRHRGRGSAQRDGKGLKILSKKVRKELS-----KVDQRHRASQLRKQ 60
Query: 61 KRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSSTVSSSK 120
K+ A+L EKR PP +++ L ++L L Q + GT L+ S+
Sbjct: 61 KKEAVLAEKRQLGSKDGPPHQVLVVPLHDKISLPEAFR--LLQDTDTGTVHLNECGSTHS 118
Query: 121 YRL-------RTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQC 173
+ L R A GDL ++MAKVAD DS G+ C
Sbjct: 119 FMLLCPRLKHRWFFTSARPGDLHTVLDMAKVADTILFLLDPLEGW--------DSIGDYC 170
Query: 174 LSVFRSLGLPSTAVLIRDLPTDLKKRK--DLKKMCISSLTSEFPEDCKFYAADTKDELHK 231
LS + GLP+ + ++ + + L RK D +K ++ FP D K DT+ E
Sbjct: 171 LSCLFAQGLPTYTLAVQGI-SGLPPRKQIDARKKLSKTVEKRFPSD-KLLLLDTQQEAEM 228
Query: 232 FLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLVHI 291
L Q+ +R++R +L A D V + N+ TL + GY+R L+VN L+HI
Sbjct: 229 LLRQLANQKQRHLAFRDRRAYLFAHAADFVPSEENNLVGTLKISGYVRGQTLNVNSLLHI 288
Query: 292 SGAGDFQLGKIEILKDPFPLNAR-----KESDA--ME---SDEIHDLEV-IRT-LSPDPL 339
G GDFQ+ +I+ DPFPLN R KE ME D + D+E ++ + DP
Sbjct: 289 IGQGDFQMKQIDAPMDPFPLNFRMIKSQKEDPGVTMEICAMDAVADMEEDLKVVMKADPD 348
Query: 340 KLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIV 395
K E L E DP+ GEQTWPTE E++EA+ K + + +P+GTS YQA WI+
Sbjct: 349 KQESLQTEVNLDPMEGEQTWPTEEELSEANDFLKESSKVVKKVPKGTSSYQAEWIL 404
>UNIPROTKB|F1PXP0 [details] [associations]
symbol:F1PXP0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074945 EMBL:AAEX03006702
Ensembl:ENSCAFT00000030598 OMA:THEVERF Uniprot:F1PXP0
Length = 725
Score = 592 (213.5 bits), Expect = 6.8e-98, Sum P(2) = 6.8e-98
Identities = 124/252 (49%), Positives = 158/252 (62%)
Query: 483 FPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFAN 542
FPDE+DTP DV AR RF KYRGLKSFRTS WDPKE+LP +YARIF F FT T+K +F
Sbjct: 484 FPDEIDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPRDYARIFQFQNFTNTRKRIFKE 543
Query: 543 ALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAER-SPLIASGLLQHESKMSVLH 601
+ E E + YV LH+ EVP + E +R +PLIA LL HE KMSVL+
Sbjct: 544 IEEKEVEGAE----VGWYVTLHVSEVPLSVV----EYFKRGAPLIAFSLLPHEQKMSVLN 595
Query: 602 FSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASI 661
V +H P+KAKE+LIFH GFR+F A P+FS +DKHK +RFL A V +I
Sbjct: 596 MVVSRHPGNIEPVKAKEDLIFHCGFRRFRASPLFSQHTA-ADKHKFQRFLTADVALVVTI 654
Query: 662 YAPICFPPLPLIVLKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIV 721
Y PI FPP +++ K L S+DPDR+++K+IVL+G+P ++ A+V
Sbjct: 655 YGPITFPPASVLLFKQNSNGMHSLIATGYLL-SVDPDRMVIKRIVLSGHPFKIFTKMAVV 713
Query: 722 RYMFHNPEDVRW 733
RYMF + EDV W
Sbjct: 714 RYMFFSREDVLW 725
Score = 400 (145.9 bits), Expect = 6.8e-98, Sum P(2) = 6.8e-98
Identities = 134/418 (32%), Positives = 197/418 (47%)
Query: 2 TGSRVQVNKSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARV-QRNK--MLR 58
+G Q NK+HK R + K + IG + + ++V QR++ LR
Sbjct: 5 SGPLKQQNKAHKG--GRHRGRGSAQRDGKGEE-IGLKILSKKVRKELSKVDQRHRASQLR 61
Query: 59 DQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSSTVSS 118
QK+ A+L EKR PP +++ L ++L L Q + GT L+ S+
Sbjct: 62 KQKKEAVLAEKRQLGSKDGPPHQVLVVPLHDKISLPEAFR--LLQDTDTGTVHLNECGST 119
Query: 119 SKYRL-------RTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGN 171
+ L R A GDL ++MAKVAD DS G+
Sbjct: 120 HSFMLLCPRLKHRWFFTSARPGDLHTVLDMAKVADTILFLLDPLEGW--------DSIGD 171
Query: 172 QCLSVFRSLGLPSTAVLIRDLPTDLKKRK--DLKKMCISSLTSEFPEDCKFYAADTKDEL 229
CLS + GLP+ + ++ + + L RK D +K ++ FP D K DT+ E
Sbjct: 172 YCLSCLFAQGLPTYTLAVQGI-SGLPPRKQIDARKKLSKTVEKRFPSD-KLLLLDTQQEA 229
Query: 230 HKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLV 289
L Q+ +R++R +L A D V + N+ TL + GY+R L+VN L+
Sbjct: 230 EMLLRQLANQKQRHLAFRDRRAYLFAHAADFVPSEENNLVGTLKISGYVRGQTLNVNSLL 289
Query: 290 HISGAGDFQLGKIEILKDPFPLNAR-----KESDA--ME---SDEIHDLEV-IRT-LSPD 337
HI G GDFQ+ +I+ DPFPLN R KE ME D + D+E ++ + D
Sbjct: 290 HIIGQGDFQMKQIDAPMDPFPLNFRMIKSQKEDPGVTMEICAMDAVADMEEDLKVVMKAD 349
Query: 338 PLKLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIV 395
P K E L E DP+ GEQTWPTE E++EA+ K + + +P+GTS YQA WI+
Sbjct: 350 PDKQESLQTEVNLDPMEGEQTWPTEEELSEANDFLKESSKVVKKVPKGTSSYQAEWIL 407
>ZFIN|ZDB-GENE-030131-3762 [details] [associations]
symbol:tsr1 "TSR1, 20S rRNA accumulation, homolog
(yeast)" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
ZFIN:ZDB-GENE-030131-3762 GO:GO:0005634 GO:GO:0042254
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074945
EMBL:CT027805 IPI:IPI00817275 PRIDE:E7FCX4
Ensembl:ENSDART00000052645 ArrayExpress:E7FCX4 Bgee:E7FCX4
Uniprot:E7FCX4
Length = 836
Score = 574 (207.1 bits), Expect = 1.9e-97, Sum P(3) = 1.9e-97
Identities = 117/253 (46%), Positives = 156/253 (61%)
Query: 483 FPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFAN 542
FPDEVDTPLDVP+R RF +YRGLKSFR+S WDP E+LP Y+RIF F F R ++ + A+
Sbjct: 517 FPDEVDTPLDVPSRTRFQRYRGLKSFRSSPWDPLENLPSNYSRIFQFQNFERMRRRILAD 576
Query: 543 ALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHF 602
A N +D YV LHI +VP + PL+ LL HE KMSV++
Sbjct: 577 AA-----NEEDGAMVGWYVTLHIVDVPPSVME---SFQTGKPLVLVSLLPHEQKMSVMNV 628
Query: 603 SVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASIY 662
V++H + PIK+KEEL+F GFR+F A IFS + DKHK+ERFL ++ S Y
Sbjct: 629 LVRQHPSNTEPIKSKEELVFQCGFRRFRASAIFSQ-HTTGDKHKLERFLRPDAPTIMSFY 687
Query: 663 APICFPPLPLIVLKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVR 722
API FP ++V K SL S DP R++LK+IVL+G+P ++++ A+VR
Sbjct: 688 APITFPTAGVLVFKQRDNGMQDLVATG-SLLSCDPRRVVLKRIVLSGHPFKINRRSAVVR 746
Query: 723 YMFHNPEDVRWFK 735
YMF N +D+ WFK
Sbjct: 747 YMFFNRDDILWFK 759
Score = 385 (140.6 bits), Expect = 1.9e-97, Sum P(3) = 1.9e-97
Identities = 129/414 (31%), Positives = 199/414 (48%)
Query: 7 QVNKSHK-SRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQKRLAL 65
Q NK HK + TK + K + K R N++ R++K L +
Sbjct: 19 QKNKQHKHGKHRTKGEIGRENKGRVAIVALTKKQRREMR-KKDRRNTANQLRRNKKDL-V 76
Query: 66 LKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQ------LSSEG-TGALSST-VS 117
L EKR PP ++ + L + V+ +V + L + +G TGA S +
Sbjct: 77 LTEKRKLGSRDGPPHLVAVIALHSRVDAGAVTKMLRGEGVGGVVREDQGVTGAKDSFGLV 136
Query: 118 SSKYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVF 177
+++ R + + DL +++AK+AD DS+G CLS
Sbjct: 137 LPRFKQRFTFYRPDTDDLHSLLDVAKIADSLVFVLDSNEGW--------DSYGEYCLSCL 188
Query: 178 RSLGLPSTAVLIRDLPTDL--KKRKDLKKMCISSLTSEFPEDCKFYAADTKDE---LHKF 232
+ GLPS A++ + + DL KKR + ++ + S FPE + + D + L +
Sbjct: 189 FAQGLPSHALVCQGV-ADLAVKKRTESRRALSRLVESRFPE-ARLFPVDCDQDAVLLLRH 246
Query: 233 LWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKC--TLLLHGYLRAHCLSVNQLVH 290
L K++RL +R++R L+AQ+ V ++ SG TL + GY+R L VN+LVH
Sbjct: 247 LSAQKQRRLG---FRSRRSHLLAQRATYVPNNSQSGTGLGTLCVSGYIRGCPLQVNRLVH 303
Query: 291 ISGAGDFQLGKIEILKDPFPLNARKESDAMESDEIH-----DLEV---IRTL-SPDPLKL 341
I+G GDFQL +I+ DP P+ A ++ D EV +R L DP +
Sbjct: 304 ITGHGDFQLSQIDAPADPLPIVLSTSRPAKPGRDVEMMDGGDGEVNGDVRVLMKADPAQR 363
Query: 342 EPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIV 395
E L E DP+ GEQTWPTEAE+ EA++ K R+ K +P+GTS+YQA WI+
Sbjct: 364 ESLQAEAEVDPMEGEQTWPTEAELEEAEEASKKRRVMK--VPKGTSDYQATWII 415
Score = 49 (22.3 bits), Expect = 1.9e-97, Sum P(3) = 1.9e-97
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 426 EGTNNSDIDDDQASLNFRYADDGTENDSVMMEGEI 460
EG D DDD S DD ++D MM+ E+
Sbjct: 422 EGDGGDDGDDDDDS-----CDDDDDDDDEMMDDEM 451
Score = 43 (20.2 bits), Expect = 8.1e-97, Sum P(3) = 8.1e-97
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 414 VLDQ--EDRGFPGYEGTNNSDIDDDQASLNFRYADDGTENDS 453
++D+ E+ G G +G ++ D DD + DD + D+
Sbjct: 414 IIDENAEEEGDGGDDGDDDDDSCDDDDDDDDEMMDDEMDGDN 455
>UNIPROTKB|F1MSR6 [details] [associations]
symbol:TSR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:DAAA02048673 EMBL:DAAA02048672 IPI:IPI00867224
Ensembl:ENSBTAT00000005534 ArrayExpress:F1MSR6 Uniprot:F1MSR6
Length = 804
Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
Identities = 263/759 (34%), Positives = 376/759 (49%)
Query: 2 TGSRVQVNKSHKSRFSTKSSRNLHKTAAKD-KSRIGKSDCNVAKGAKAARV-QRNK--ML 57
+G Q NK+HK R +A +D K R+ + +RV QR++ L
Sbjct: 6 SGPLKQQNKAHKG--GRHRGRG---SAQRDGKGRLAPKTLSKKVRKDLSRVDQRHRASQL 60
Query: 58 RDQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSSTVS 117
R QK+ A+L EKR PP +++ L ++L + L Q GT L+ S
Sbjct: 61 RKQKKEAVLAEKRQLGSKDGPPHQVLVVPLHNRISLPEAFQ--LLQDRDTGTVHLNEWGS 118
Query: 118 SSKYRL-------RTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFG 170
+ + L R A GDL ++MAKVAD DS G
Sbjct: 119 THSFMLLCPRLKHRWFFTSARPGDLHTVLDMAKVADTILFLLDPLEGW--------DSTG 170
Query: 171 NQCLSVFRSLGLPSTAVLIRDLPT-DLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDEL 229
+ CLS + GLP+ + ++ + + KK+ D +K ++ FPED K DT+ E
Sbjct: 171 DYCLSCLFAQGLPTYTLAVQGISSLPPKKQIDARKKLSKAVEKRFPED-KLLLLDTQQEA 229
Query: 230 HKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLV 289
L Q+ +R++R +L A + V + + TL + GY+R L+VN ++
Sbjct: 230 GMLLRQLANQKQRHLAFRDRRAYLFAHAAEFVPSEESDLVGTLKISGYVRGQALNVNSVL 289
Query: 290 HISGAGDFQLGKIEILKDPFPLNAR-----KESD-AME---SDEI----HDLEVIRTLSP 336
HI G GDFQ+ +++ DPFPLN R K+S AME +D + DL+V+ P
Sbjct: 290 HIIGHGDFQMKQVDAPVDPFPLNPRVIKSSKDSGTAMEICAADAVARMEEDLKVLMKADP 349
Query: 337 DPLKLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIVX 396
D + E L E +PDP+ GEQTWPTE E++EA K + + +P+GTS YQA WI+
Sbjct: 350 D--RQESLQTEVIPDPMEGEQTWPTEEELSEAHDLLKESSKVVKKVPKGTSSYQAEWILD 407
Query: 397 XXXXXXXXXXXXXXXGMVLDQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTENDSVMM 456
++ ED F E + ++++ + +D +
Sbjct: 408 EDGESGGEGDEYDD----IEHED--FMEEESQDEGSEEEEEEECETMTIGESVRDD--LY 459
Query: 457 EGEILTRXXXXXXXXXXXXXXXXXXXFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPK 516
+ ++ FPDEVDTP DV AR RF KYRGLKSFRTS WDPK
Sbjct: 460 DEKV--DEEAEEKMLEKYKQQRLEEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPK 517
Query: 517 ESLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRL 576
E+LP +YARIF F F T++ +F + E E + YV LH+ EVP +
Sbjct: 518 ENLPRDYARIFQFQNFINTRRRIFKEIEEKEVEGAE----VGWYVTLHVSEVPVSVVEHF 573
Query: 577 CEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFS 636
+PLIA LL HE KMSVL+ V +H P+KAKEELIFH GFR+F A P+FS
Sbjct: 574 ---KRGTPLIAFSLLPHEQKMSVLNMVVSRHPGNTEPVKAKEELIFHCGFRRFRASPLFS 630
Query: 637 SDNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLKSXXXXXXXXXXXXXSLRSID 696
+DKHK +RFL A V ++YAPI FPP +++ K L S+D
Sbjct: 631 QHTA-ADKHKFQRFLTADTALVVTVYAPITFPPASVLLFKQNSNGMHSLIATGHLL-SVD 688
Query: 697 PDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFK 735
PDR+++K++VL+G+P ++ A+VRYMF N EDV WFK
Sbjct: 689 PDRMVIKRVVLSGHPFKIFTKTAVVRYMFFNREDVLWFK 727
>UNIPROTKB|E2QYA6 [details] [associations]
symbol:E2QYA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074945 EMBL:AAEX03006702
Ensembl:ENSCAFT00000030599 Uniprot:E2QYA6
Length = 656
Score = 603 (217.3 bits), Expect = 8.9e-94, Sum P(2) = 8.9e-94
Identities = 126/254 (49%), Positives = 160/254 (62%)
Query: 483 FPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFAN 542
FPDE+DTP DV AR RF KYRGLKSFRTS WDPKE+LP +YARIF F FT T+K +F
Sbjct: 336 FPDEIDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPRDYARIFQFQNFTNTRKRIFKE 395
Query: 543 ALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAER-SPLIASGLLQHESKMSVLH 601
+ E E + YV LH+ EVP + E +R +PLIA LL HE KMSVL+
Sbjct: 396 IEEKEVEGAE----VGWYVTLHVSEVPLSVV----EYFKRGAPLIAFSLLPHEQKMSVLN 447
Query: 602 FSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASI 661
V +H P+KAKE+LIFH GFR+F A P+FS +DKHK +RFL A V +I
Sbjct: 448 MVVSRHPGNIEPVKAKEDLIFHCGFRRFRASPLFSQHTA-ADKHKFQRFLTADVALVVTI 506
Query: 662 YAPICFPPLPLIVLKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIV 721
Y PI FPP +++ K L S+DPDR+++K+IVL+G+P ++ A+V
Sbjct: 507 YGPITFPPASVLLFKQNSNGMHSLIATGYLL-SVDPDRMVIKRIVLSGHPFKIFTKMAVV 565
Query: 722 RYMFHNPEDVRWFK 735
RYMF + EDV WFK
Sbjct: 566 RYMFFSREDVLWFK 579
Score = 350 (128.3 bits), Expect = 8.9e-94, Sum P(2) = 8.9e-94
Identities = 90/243 (37%), Positives = 130/243 (53%)
Query: 167 DSFGNQCLSVFRSLGLPSTAVLIRDLPTDLKKRK--DLKKMCISSLTSEFPEDCKFYAAD 224
DS G+ CLS + GLP+ + ++ + + L RK D +K ++ FP D K D
Sbjct: 19 DSIGDYCLSCLFAQGLPTYTLAVQGI-SGLPPRKQIDARKKLSKTVEKRFPSD-KLLLLD 76
Query: 225 TKDELHKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLS 284
T+ E L Q+ +R++R +L A D V + N+ TL + GY+R L+
Sbjct: 77 TQQEAEMLLRQLANQKQRHLAFRDRRAYLFAHAADFVPSEENNLVGTLKISGYVRGQTLN 136
Query: 285 VNQLVHISGAGDFQLGKIEILKDPFPLNAR-----KESDA--ME---SDEIHDLEV-IRT 333
VN L+HI G GDFQ+ +I+ DPFPLN R KE ME D + D+E ++
Sbjct: 137 VNSLLHIIGQGDFQMKQIDAPMDPFPLNFRMIKSQKEDPGVTMEICAMDAVADMEEDLKV 196
Query: 334 -LSPDPLKLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAA 392
+ DP K E L E DP+ GEQTWPTE E++EA+ K + + +P+GTS YQA
Sbjct: 197 VMKADPDKQESLQTEVNLDPMEGEQTWPTEEELSEANDFLKESSKVVKKVPKGTSSYQAE 256
Query: 393 WIV 395
WI+
Sbjct: 257 WIL 259
>FB|FBgn0037073 [details] [associations]
symbol:CG7338 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 EMBL:AE014296
GO:GO:0005730 GO:GO:0022008 GO:GO:0042255 InterPro:IPR007034
Pfam:PF04950 eggNOG:COG5177 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 EMBL:BT003192 EMBL:BT044092
EMBL:AY058591 RefSeq:NP_649304.1 UniGene:Dm.1034
ProteinModelPortal:Q9VP47 IntAct:Q9VP47 MINT:MINT-823454
STRING:Q9VP47 PaxDb:Q9VP47 PRIDE:Q9VP47 EnsemblMetazoa:FBtr0078342
GeneID:40360 KEGG:dme:Dmel_CG7338 UCSC:CG7338-RA
FlyBase:FBgn0037073 InParanoid:Q9VP47 OrthoDB:EOG4QFTVF
PhylomeDB:Q9VP47 GenomeRNAi:40360 NextBio:818374 Bgee:Q9VP47
Uniprot:Q9VP47
Length = 814
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 243/758 (32%), Positives = 358/758 (47%)
Query: 3 GSRVQVNKSHKSRFSTKSSRNLHKTAAKDKSRIG-KSDCNVAKGAKAARVQRNKM--LRD 59
G Q NK+HK+ S+ A K K IG + + K + +RN+M LR
Sbjct: 10 GPLKQANKAHKT--GRHRSKGAIDNAQKGK--IGLRPISHKHKQQQRKEQRRNQMNQLRK 65
Query: 60 QKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSST---- 115
KR +L++KR G + P ++ L + ++ S E +L+ SE S +
Sbjct: 66 NKREEVLEQKRKLGGQNTAPFLVCLLPMHEQIDPMSALE-ILKSCDSELVVENSPSGIVY 124
Query: 116 VSSSKYRLRTSVLQAPHG---DLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQ 172
++ +++ R + + P G +L+ ++ KV D D +G +
Sbjct: 125 INLPRFKQRFAFVTPPVGRGNELIA-LDYLKVCDTTLLLTTAAFGDDEIF----DRWGQR 179
Query: 173 CLSVFRSLGLPSTAVLIRDLPTDLKKRKDLKKMCISSLTSEF-PEDCKFYAADTKDELHK 231
++ + G+P+ V + DL + KR+ K + S+ PE+ K DT E
Sbjct: 180 IFNMMSAQGIPTPVVALMDLESINPKRRPAAKQAAQKVISKLLPEE-KIMQLDTASEALN 238
Query: 232 FLWLFKEQRLTVPHWRNQRPFLMAQKVDVV-ADDCNSGKCTLLLHGYLRAHCLSVNQLVH 290
+ Q+ + H RP L V+ D + TL + G+LR L+VN LVH
Sbjct: 239 VMRRIGGQKKRILHNVANRPHLFGDVVEFKPGSDPSDDLGTLEVTGFLRGQSLNVNGLVH 298
Query: 291 ISGAGDFQLGKIEILKDPFPLNARKESDAMESDEIHDLEVIRTLSPDPLKLEPLLVENVP 350
I G GDFQL ++ DP+ L+ K D E+ E+ L+ R+ DP K L EN+P
Sbjct: 299 IPGLGDFQLSQVVAPPDPYKLD--KSRDG-ENSEVRLLD--RS---DPSKRTSLQSENIP 350
Query: 351 DPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIVXXXXXXXXXXXXXXX 410
DP+ EQTWPTE E+A + K K KR +P+G SEYQAAWI
Sbjct: 351 DPMDAEQTWPTEDEIAASQAETKKMKLVKR-VPKGYSEYQAAWIPDVEEVEDPDGKDDDD 409
Query: 411 XGMVLDQEDRGFPGYEGTNNSDIDDDQASLNFRYA--DDGTEN--DSVMMEGEILTRXXX 466
M D +D E N + D S Y D TE D+V + E
Sbjct: 410 --MSEDDDD----DKEDDNEDFMSCDNKSFEDEYEKRDSDTEEFQDTVSVASEAAINDEK 463
Query: 467 XXX---------XXXXXXXXXXXXXFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKE 517
+PDE+DTPLDVPAR+RF KYRGL+SFRTS WD KE
Sbjct: 464 YDQQMDFQEERETLKKLQQARTDQLWPDEIDTPLDVPARERFQKYRGLESFRTSPWDAKE 523
Query: 518 SLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLC 577
+LP +YARI+ F F RT++ + A + E V LYV L++ VP +
Sbjct: 524 NLPADYARIYQFQNFDRTKRRILNEAKEFE------GVLPGLYVTLYVINVPESRWNAFK 577
Query: 578 EMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSS 637
+I G+L HE +M V++ +++ + P+K+KE+LI G+R+FV PI+S
Sbjct: 578 SAQLMDNIIVYGMLPHEHQMCVMNVVLQRMPDSEVPLKSKEQLIIQCGYRRFVVNPIYSQ 637
Query: 638 DNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLKSXXXXXXXXXXXXXSLRSIDP 697
+ N DKHK ER+ A+ YAPI FPP P++ K L S +P
Sbjct: 638 -HTNGDKHKFERYFRPYETVCATFYAPIQFPPAPVLAFK-VNPDSTLALVARGRLLSCNP 695
Query: 698 DRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFK 735
DRI+LK++VL+G+P R+++ A +RYMF EDV +FK
Sbjct: 696 DRIVLKRVVLSGHPMRINRKSASIRYMFFYKEDVEYFK 733
>DICTYBASE|DDB_G0278331 [details] [associations]
symbol:DDB_G0278331 "Pre-rRNA-processing protein TSR1
homolog" species:44689 "Dictyostelium discoideum" [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
dictyBase:DDB_G0278331 GO:GO:0005730 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 GO:GO:0042254 InterPro:IPR007034 Pfam:PF04950
eggNOG:COG5177 KO:K14799 OMA:DAEQTWP RefSeq:XP_642295.1
STRING:Q54YA7 EnsemblProtists:DDB0205380 GeneID:8621502
KEGG:ddi:DDB_G0278331 ProtClustDB:CLSZ2729113 Uniprot:Q54YA7
Length = 826
Score = 524 (189.5 bits), Expect = 1.6e-81, Sum P(3) = 1.6e-81
Identities = 108/256 (42%), Positives = 159/256 (62%)
Query: 483 FPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFAN 542
+PDEVDTP +VP+R RF+K+RGLKSFR+S WD KE+LP +YA+IF F F ++ + A
Sbjct: 522 YPDEVDTPGNVPSRIRFSKFRGLKSFRSSPWDVKENLPIDYAKIFQFHSFNQSMRASIA- 580
Query: 543 ALKMEQENMDDSVPAS--LYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVL 600
+ D+ PA +YVR+H+ P + R P +A GL ++E+K+S+L
Sbjct: 581 --------ILDNAPAKPDMYVRIHLVNGPKQLVERNTTAITTKPEVAVGLYRYENKISLL 632
Query: 601 HFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVAS 660
HFSV+KH +Y+ +++KEE+ FH G+R+F PI+S + N DK K E+FL ++A+
Sbjct: 633 HFSVEKHKSYEETVRSKEEVYFHFGWRKFSTSPIYSISSPNCDKQKFEKFLLPARNTMAT 692
Query: 661 IYAPICFPPLPLIVLKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGY-PQRVSKLKA 719
IY PI +PP PL++ L S++PDRII K+I+LTG + +SK
Sbjct: 693 IYGPITYPPAPLLIFNGKDCNELVATGY---LSSVNPDRIICKRIILTGVIAKSISKKFV 749
Query: 720 IVRYMFHNPEDVRWFK 735
V+ MF+ PED+ WFK
Sbjct: 750 TVKDMFYYPEDINWFK 765
Score = 304 (112.1 bits), Expect = 1.6e-81, Sum P(3) = 1.6e-81
Identities = 112/424 (26%), Positives = 188/424 (44%)
Query: 1 MTGSRVQVNKSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGA-KAARVQRNKMLRD 59
M+ R + H+ K ++ K A K +++ GK + N A+ + K + NK
Sbjct: 1 MSEHRHRSGDLHQQNKGFKGGKHDSKGAIKRRAQ-GKIETNGARQSIKNLAIVNNKDAMR 59
Query: 60 QKRLALLKEK------RASSGIASP--PRVIVLFGLSASVNLNSVREDLLRQLSSE-GTG 110
QK L+K K R G+ PRV+ + LS S N V+E LL++ TG
Sbjct: 60 QKHQKLVKSKKNELLERKRLGLPDQVAPRVVTIIKLSESCNTKKVKEMLLQKFKLNINTG 119
Query: 111 ALS----STVSSSKYR----LRTSVLQAPHGDLVGCMEMA--KVADLXXXXXXXXXXXXX 160
+ T+++ S+ L+ C MA +V +
Sbjct: 120 EMEMDNEETLNNKNNNNDNFTTISLTSKVRMMLLECQTMAYDQVIEFCKLSDIILFVIDA 179
Query: 161 XMSYYIDSFGNQCLSVFRSLGLPSTAVLIRDLP-TDLKKRKDLKKMCISSLTSEFPEDCK 219
+ ++S + ++ ++ +P+ +I++L T +KKR +LKK S FP + K
Sbjct: 180 NQAK-LNSEAERIFTIVKAQSVPTVIEIIQNLDQTPIKKRNELKKSIQSVFHFHFPNEPK 238
Query: 220 FYAADTKDELHKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLR 279
DT DE + L + + WR RP+++ +K + + K + + G++R
Sbjct: 239 VLPMDTNDECSQVLRYIENIHVNEIIWRKVRPYMLIEKSSYIPET----K-VVTIDGFIR 293
Query: 280 AHCLSVNQLVHISGAGDFQLGKIEILKDP-------FPLNARKESDAMESD--EIHDLEV 330
+ LS Q++HI GDFQ+ KIE++ DP + N S+ + E+ +
Sbjct: 294 GNNLSAKQIIHIPDYGDFQIEKIELIDDPHIRKKSYYTNNNNNNSNNNNTGGGEMEQDKK 353
Query: 331 IRTLSP-DPLKLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEY 389
I L D + L NVPDP+ EQ PT EM E + N+K K+ +P+GTS Y
Sbjct: 354 INILDKVDQKDKDTLQTWNVPDPMDNEQALPTAEEMKEIEANKK-----KKLVPKGTSGY 408
Query: 390 QAAW 393
Q++W
Sbjct: 409 QSSW 412
Score = 37 (18.1 bits), Expect = 1.6e-81, Sum P(3) = 1.6e-81
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 420 RGFPGYEGTNNSDIDDDQASLNFRYAD 446
+G GY+ + D + D+ NF D
Sbjct: 403 KGTSGYQSSWYLDNESDEEEENFENED 429
>WB|WBGene00006497 [details] [associations]
symbol:tag-151 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
GO:GO:0009792 GO:GO:0040010 GO:GO:0005730 GO:GO:0040011
EMBL:FO081114 GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
eggNOG:COG5177 HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP
PIR:C88131 RefSeq:NP_494840.1 ProteinModelPortal:Q19329
STRING:Q19329 PaxDb:Q19329 EnsemblMetazoa:F10G7.1.1
EnsemblMetazoa:F10G7.1.2 GeneID:173812 KEGG:cel:CELE_F10G7.1
UCSC:F10G7.1.2 CTD:173812 WormBase:F10G7.1
GeneTree:ENSGT00550000074945 InParanoid:Q19329 NextBio:881217
Uniprot:Q19329
Length = 785
Score = 540 (195.1 bits), Expect = 3.9e-75, Sum P(2) = 3.9e-75
Identities = 142/421 (33%), Positives = 214/421 (50%)
Query: 333 TLSPDPLKL-----EPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRA------ 381
T+ P PLK E ++ D +T T M + +Q R++ + A
Sbjct: 304 TVDPHPLKAHNKTPEAQIIAKSDDKRQNTETEITPDSM-DGEQTWPTREELEEADKELRR 362
Query: 382 LPRGTSEYQAAWIVXXXXXXXXXXXXXXXXGMVLDQEDRGFPGYEGTNNSDIDDD---QA 438
+P+GTS YQAAWI+ D+ED + ++N +++DD +
Sbjct: 363 VPKGTSSYQAAWILDDEDDE--------------DEEDSD-EDMDDSDNEEVEDDSEEEE 407
Query: 439 SLNFRYADDGTENDSVMMEGEILTRXXXXXXXXXXXXXXXXXXXFPDEVDTPLDVPARKR 498
++ ++ G S MM + + +PDEVDTP+D+PAR
Sbjct: 408 PMDDLKSEAGETTASEMMFDDGIDEDINMAEVEKYRKERENAQ-WPDEVDTPMDMPARIA 466
Query: 499 FAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFAN--ALKMEQENMDDSVP 556
F KYRGLKSFRTS+WDPKE+LP +YARIF F + T+K+V + ++ +++ D
Sbjct: 467 FQKYRGLKSFRTSTWDPKENLPLDYARIFQFANYRNTKKNVMSKIGGNDVDADSVADKKF 526
Query: 557 ASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKA 616
+ + I+ VP + L + L+ LL HE KMSVL+ +KKH + PI +
Sbjct: 527 NGAFASVFIENVPVAV---LEAYKDAKNLVLFQLLPHEHKMSVLNMVLKKHPSCTIPITS 583
Query: 617 --KEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIV 674
++ IF+VGFRQF A +FSS N DK K+ERF+ VA++YAPI F P ++
Sbjct: 584 DQNQKFIFYVGFRQFEANAVFSS-NTPGDKFKLERFMPTEKTFVATVYAPITFNPATVLC 642
Query: 675 LKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWF 734
+ L S +PDRI+LK+ VL G+P ++++ +VRYMF N ED+ WF
Sbjct: 643 FRQDDKGRQELVATGSILDS-NPDRIVLKRTVLAGHPYKINRRAVVVRYMFFNREDIEWF 701
Query: 735 K 735
K
Sbjct: 702 K 702
Score = 240 (89.5 bits), Expect = 3.9e-75, Sum P(2) = 3.9e-75
Identities = 97/385 (25%), Positives = 177/385 (45%)
Query: 2 TGSRVQV-NKSHKSRFSTKSSRNLHKTAAKDKSRIG-KSDCNVAKG-----AKAARVQRN 54
TG R V K K S K R + ++++ R G K A +K AR +
Sbjct: 4 TGHRAGVFKKPSKPHKSWKGKRTKGEITSENRGREGVKQLTRSAHSTHRTISKDARRNQL 63
Query: 55 KMLRDQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSS 114
KM RDQK ++ +R S+ +P V V+ S+ + + + +++L++ + +
Sbjct: 64 KMARDQKMADAMERRRTSN---APCLVTVV-----SLGVGARPTEFIKKLATCDETIIQT 115
Query: 115 TVSSS------KYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDS 168
T S+ +++ R S L ++ G ++ + +D+ MS +
Sbjct: 116 TSPSTIDFAIPRFKSRVSFLTPDKDNVDGVLDAIRASDVLCFLWP--------MSAELSE 167
Query: 169 FGNQCLSVFRSLGLPSTAVLIRDLPT--DLKKRKDLKKMCISSLTSEFP-EDCKFYAADT 225
+ Q L++ ++ GLP+ ++ L + + KK++D++K I + S++ + AD+
Sbjct: 168 WDEQLLTIIKANGLPTIVSVVPGLGSIANHKKKEDVRKG-IEFIISKWSMSNAGVMPADS 226
Query: 226 KDELHKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSV 285
+ + L + E + + + +++ + ++ D CTL+ GYLR +
Sbjct: 227 VTDNLQLLRILNETKKKPLTLQARHSYMLVENLE--CSDKTGETCTLVAQGYLRGPEWNA 284
Query: 286 NQLVHISGAGDFQLGKIEILKDPFPLNARKESDAMESDEIHDLEVIRTLSPDPLKLEPLL 345
N LVH+ G GDFQ+ KIE DP PL A ++ + ++I S D K +
Sbjct: 285 NNLVHLPGFGDFQISKIESTVDPHPLKAHNKTP--------EAQIIAK-SDD--KRQNTE 333
Query: 346 VENVPDPLAGEQTWPTEAEMAEADQ 370
E PD + GEQTWPT E+ EAD+
Sbjct: 334 TEITPDSMDGEQTWPTREELEEADK 358
>UNIPROTKB|Q19329 [details] [associations]
symbol:tag-151 "Pre-rRNA-processing protein TSR1 homolog"
species:6239 "Caenorhabditis elegans" [GO:0042255 "ribosome
assembly" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0009792
GO:GO:0040010 GO:GO:0005730 GO:GO:0040011 EMBL:FO081114
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP PIR:C88131
RefSeq:NP_494840.1 ProteinModelPortal:Q19329 STRING:Q19329
PaxDb:Q19329 EnsemblMetazoa:F10G7.1.1 EnsemblMetazoa:F10G7.1.2
GeneID:173812 KEGG:cel:CELE_F10G7.1 UCSC:F10G7.1.2 CTD:173812
WormBase:F10G7.1 GeneTree:ENSGT00550000074945 InParanoid:Q19329
NextBio:881217 Uniprot:Q19329
Length = 785
Score = 540 (195.1 bits), Expect = 3.9e-75, Sum P(2) = 3.9e-75
Identities = 142/421 (33%), Positives = 214/421 (50%)
Query: 333 TLSPDPLKL-----EPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRA------ 381
T+ P PLK E ++ D +T T M + +Q R++ + A
Sbjct: 304 TVDPHPLKAHNKTPEAQIIAKSDDKRQNTETEITPDSM-DGEQTWPTREELEEADKELRR 362
Query: 382 LPRGTSEYQAAWIVXXXXXXXXXXXXXXXXGMVLDQEDRGFPGYEGTNNSDIDDD---QA 438
+P+GTS YQAAWI+ D+ED + ++N +++DD +
Sbjct: 363 VPKGTSSYQAAWILDDEDDE--------------DEEDSD-EDMDDSDNEEVEDDSEEEE 407
Query: 439 SLNFRYADDGTENDSVMMEGEILTRXXXXXXXXXXXXXXXXXXXFPDEVDTPLDVPARKR 498
++ ++ G S MM + + +PDEVDTP+D+PAR
Sbjct: 408 PMDDLKSEAGETTASEMMFDDGIDEDINMAEVEKYRKERENAQ-WPDEVDTPMDMPARIA 466
Query: 499 FAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFAN--ALKMEQENMDDSVP 556
F KYRGLKSFRTS+WDPKE+LP +YARIF F + T+K+V + ++ +++ D
Sbjct: 467 FQKYRGLKSFRTSTWDPKENLPLDYARIFQFANYRNTKKNVMSKIGGNDVDADSVADKKF 526
Query: 557 ASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKA 616
+ + I+ VP + L + L+ LL HE KMSVL+ +KKH + PI +
Sbjct: 527 NGAFASVFIENVPVAV---LEAYKDAKNLVLFQLLPHEHKMSVLNMVLKKHPSCTIPITS 583
Query: 617 --KEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIV 674
++ IF+VGFRQF A +FSS N DK K+ERF+ VA++YAPI F P ++
Sbjct: 584 DQNQKFIFYVGFRQFEANAVFSS-NTPGDKFKLERFMPTEKTFVATVYAPITFNPATVLC 642
Query: 675 LKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWF 734
+ L S +PDRI+LK+ VL G+P ++++ +VRYMF N ED+ WF
Sbjct: 643 FRQDDKGRQELVATGSILDS-NPDRIVLKRTVLAGHPYKINRRAVVVRYMFFNREDIEWF 701
Query: 735 K 735
K
Sbjct: 702 K 702
Score = 240 (89.5 bits), Expect = 3.9e-75, Sum P(2) = 3.9e-75
Identities = 97/385 (25%), Positives = 177/385 (45%)
Query: 2 TGSRVQV-NKSHKSRFSTKSSRNLHKTAAKDKSRIG-KSDCNVAKG-----AKAARVQRN 54
TG R V K K S K R + ++++ R G K A +K AR +
Sbjct: 4 TGHRAGVFKKPSKPHKSWKGKRTKGEITSENRGREGVKQLTRSAHSTHRTISKDARRNQL 63
Query: 55 KMLRDQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSS 114
KM RDQK ++ +R S+ +P V V+ S+ + + + +++L++ + +
Sbjct: 64 KMARDQKMADAMERRRTSN---APCLVTVV-----SLGVGARPTEFIKKLATCDETIIQT 115
Query: 115 TVSSS------KYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDS 168
T S+ +++ R S L ++ G ++ + +D+ MS +
Sbjct: 116 TSPSTIDFAIPRFKSRVSFLTPDKDNVDGVLDAIRASDVLCFLWP--------MSAELSE 167
Query: 169 FGNQCLSVFRSLGLPSTAVLIRDLPT--DLKKRKDLKKMCISSLTSEFP-EDCKFYAADT 225
+ Q L++ ++ GLP+ ++ L + + KK++D++K I + S++ + AD+
Sbjct: 168 WDEQLLTIIKANGLPTIVSVVPGLGSIANHKKKEDVRKG-IEFIISKWSMSNAGVMPADS 226
Query: 226 KDELHKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSV 285
+ + L + E + + + +++ + ++ D CTL+ GYLR +
Sbjct: 227 VTDNLQLLRILNETKKKPLTLQARHSYMLVENLE--CSDKTGETCTLVAQGYLRGPEWNA 284
Query: 286 NQLVHISGAGDFQLGKIEILKDPFPLNARKESDAMESDEIHDLEVIRTLSPDPLKLEPLL 345
N LVH+ G GDFQ+ KIE DP PL A ++ + ++I S D K +
Sbjct: 285 NNLVHLPGFGDFQISKIESTVDPHPLKAHNKTP--------EAQIIAK-SDD--KRQNTE 333
Query: 346 VENVPDPLAGEQTWPTEAEMAEADQ 370
E PD + GEQTWPT E+ EAD+
Sbjct: 334 TEITPDSMDGEQTWPTREELEEADK 358
>UNIPROTKB|Q61WR2 [details] [associations]
symbol:tag-151 "Pre-rRNA-processing protein TSR1 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0005730 "nucleolus"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 EMBL:HE600920
RefSeq:XP_002630359.1 STRING:Q61WR2 EnsemblMetazoa:CBG04291
GeneID:8571874 KEGG:cbr:CBG04291 CTD:8571874 WormBase:CBG04291
eggNOG:COG5177 HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP
Uniprot:Q61WR2
Length = 788
Score = 529 (191.3 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 138/413 (33%), Positives = 203/413 (49%)
Query: 336 PDPLKLEPLL-VENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKK--------RALPRGT 386
P PLK P E + Q+ TE + D Q Q++ R +P+GT
Sbjct: 309 PHPLKTSPPKGAEVIAKADEKRQSLETEITLDAMDGEQTWPTQEELEEADKEMRRVPKGT 368
Query: 387 SEYQAAWIVXXXXXXXXXXXXXXXXGMVLDQEDRGFPGYEGTNNSDIDDDQASLNFRYAD 446
S YQAAWI+ M ++ED+ D +++ ++ +
Sbjct: 369 SSYQAAWILDDSEDDEDEEDEDED--MDDEEEDKDL-------EEDDEEEDTPMDLKSEA 419
Query: 447 DGTENDSVMMEGEILTRXXXXXXXXXXXXXXXXXXXFPDEVDTPLDVPARKRFAKYRGLK 506
T +M EI +PDEVDTP+D PAR RF KYRGLK
Sbjct: 420 GETTASEMMFHDEI--DEDINLAEVEKYRKERENAQWPDEVDTPIDQPARIRFQKYRGLK 477
Query: 507 SFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFANALKMEQENMD---DSVPASLYVRL 563
SFRTS+WD KE+LP +YARIF F + T+K+V + + + D D ++ +
Sbjct: 478 SFRTSTWDAKENLPVDYARIFQFANYKNTKKNVMSKIGGNDVDAGDAVIDKKFNGVFASV 537
Query: 564 HIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEE-LIF 622
+I+ VP + E L+ LL HE KMS+L+ +KKH + PI ++++ IF
Sbjct: 538 YIENVPVSVMEAY---KETKNLVLFQLLPHEQKMSILNMVLKKHPSCTVPIGSEDQKFIF 594
Query: 623 HVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLKSXXXXX 682
+VGFRQF A + SS N DK K+ERF+ VA++YAPI F P ++ +
Sbjct: 595 YVGFRQFEAHAVLSS-NTPGDKFKLERFMPTEKTFVATVYAPITFNPATVLCFRQDDKGR 653
Query: 683 XXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFK 735
S+ +PDRI+LK+ VL+G+P ++++ +VRYMF N ED+ WFK
Sbjct: 654 QELVATG-SVLDTNPDRIVLKRTVLSGHPYKINRRAVVVRYMFFNREDIDWFK 705
Score = 216 (81.1 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 92/387 (23%), Positives = 172/387 (44%)
Query: 2 TGSRVQV-NKSHKSRFSTKSSRNLHKTAAKDKSRIG-----KSDCNVAKG-AKAARVQRN 54
TG R V K K S K R + +++ R G +S + + +K AR +
Sbjct: 4 TGHRAGVFKKPAKPHKSWKGKRTKGEITTENRGREGVKQLTRSAHSTHRAVSKDARRNQL 63
Query: 55 KMLRDQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSS-EGTGALS 113
KM RD+K ++ +R S+ +P V +L S+ + + + L++L++ + T +
Sbjct: 64 KMARDRKMADAMERRRTSN---APCLVTIL-----SLGVGARPSEFLKKLATCDETIVQT 115
Query: 114 ---STVSSS--KYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDS 168
ST+ + +++ R S L ++ ++ + +D+ +S +
Sbjct: 116 HSPSTIDFAIPRFKSRISFLTPDKENVDSVLDAIRASDVLCFLWP--------LSAELSE 167
Query: 169 FGNQCLSVFRSLGLPSTAVLIRDLP--TDLKKRKDLKKMCISSLTSEFPEDCKFYAADTK 226
+ Q L++ ++ GLP+ ++ L + KK++D++K +++ + AD+
Sbjct: 168 WDEQLLTICKAAGLPTIVSVVPGLGGIQNHKKKEDVRKGIEFTISKWSMSNAGVMPADSV 227
Query: 227 DELHKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVN 286
+ + L E + + + +++ + ++ +S K TL GYLR + N
Sbjct: 228 TDNLQLLRTLNETKKKPLTLQARHSYMLVENLEATESPEDSSKITLKAQGYLRGPEWNAN 287
Query: 287 QLVHISGAGDFQLGKIEILKDPFPLNARKESDAMESDEIHDLEVIRTLSPDPLKLEPLLV 346
L+H+ G GDFQ+ KIE DP PL A EVI K + L
Sbjct: 288 NLIHLPGFGDFQISKIETAADPHPLKTSPPKGA---------EVIAKADE---KRQSLET 335
Query: 347 ENVPDPLAGEQTWPTEAEMAEADQNQK 373
E D + GEQTWPT+ E+ EAD+ +
Sbjct: 336 EITLDAMDGEQTWPTQEELEEADKEMR 362
>SGD|S000002218 [details] [associations]
symbol:TSR1 "Protein required for processing of 20S pre-rRNA
in the cytoplasm" species:4932 "Saccharomyces cerevisiae"
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA;IDA] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
SGD:S000002218 GO:GO:0005737 GO:GO:0005730 EMBL:BK006938
GO:GO:0043021 GO:GO:0030686 GO:GO:0006364 InterPro:IPR007034
Pfam:PF04950 EMBL:U53668 eggNOG:COG5177 HOGENOM:HOG000165026
KO:K14799 OMA:DAEQTWP GeneTree:ENSGT00550000074945
OrthoDB:EOG4BS0TS EMBL:Z74108 PIR:S67595 RefSeq:NP_010223.1
ProteinModelPortal:Q07381 DIP:DIP-6294N IntAct:Q07381
MINT:MINT-616207 STRING:Q07381 PaxDb:Q07381 PeptideAtlas:Q07381
EnsemblFungi:YDL060W GeneID:851499 KEGG:sce:YDL060W CYGD:YDL060w
NextBio:968840 Genevestigator:Q07381 GermOnline:YDL060W
Uniprot:Q07381
Length = 788
Score = 527 (190.6 bits), Expect = 2.3e-50, P = 2.3e-50
Identities = 204/760 (26%), Positives = 336/760 (44%)
Query: 9 NKSHKSRFSTKSS-RNLHK-TAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQKRLALL 66
+KS+KS+ ++K + + L+K K+ GK D V+K R + K LR Q+ L +
Sbjct: 14 HKSYKSKHASKGALKRLYKGKVEKEPVGTGKPDKQVSK---LQRKNKAKQLRAQRILDSI 70
Query: 67 KEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEG--TGALSS----TVSSSK 120
+ ++ G ++I + L ++ + LL+ EG + S V K
Sbjct: 71 ENRKLFEGKNGAAKIITIVPLVNDLDPLDILYKLLKCADDEGIMVQEVDSKRIFNVHIKK 130
Query: 121 YRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRSL 180
++ ++ + + ++ AKVAD + FG Q +
Sbjct: 131 FKSNLKIIIPDMTNFLNILDCAKVADFVVFGLSGVQEVD-------EEFGEQIIRALELQ 183
Query: 181 GLPSTAVLIRDLPTDLKKRK---DLKKMCISSLTSEFPEDCKFYAAD-TKDELHKFLWLF 236
G+ S +I +L +K K D+K+ S FP + + Y + D L+ L
Sbjct: 184 GIASYIGVISNLSAVHEKEKFQLDVKQSLESYFKHFFPSEERVYNLEKNSDALNVLRTLC 243
Query: 237 KEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLVHISGAGD 296
+ ++ +WR+ R +++A VD V +SG L++ G +R + N+LVHI GD
Sbjct: 244 QRLPRSI-NWRDNRGYVVADFVDFVETSPDSGD--LVIEGTVRGIGFNANRLVHIPDFGD 300
Query: 297 FQLGKIEILKDPFPLNARKESDAMESDEIHDLEV-IRTLSPDPLKLEPLLVENVPDPLAG 355
FQL KIE + + RK +D + LE+ ++T+ + + L E P+ G
Sbjct: 301 FQLNKIEKISESS--QKRKIIKEKATDSL-SLELDLQTVFESNMNRDTL-DEYAPE---G 353
Query: 356 EQTWPTEAEMAEAD-----QNQKH-----RKQ--KKRALPRGTSEYQAAWIVXXXXXXXX 403
+ W E E D + H R+Q KK A+P+GTS+YQA W +
Sbjct: 354 TEDWSDYDEDFEYDGLTTARYDDHGFLPGREQTSKKAAVPKGTSDYQAKWYLDDVIDANE 413
Query: 404 XXXXXXXXGMVLDQEDRGFPGYEGTNNSDIDDDQA--SLNFRYADDGTENDSVMMEG-EI 460
++E G + T +IDD+ N A D E D EG E
Sbjct: 414 ------------EEEAEQTNGKDETM-MEIDDEMMVEQDNEEVAGD-EEYDIEDNEGFEE 459
Query: 461 LTRXXXXXXXXXXXXXXXXXXXFPDEVDTPLDVPARKRFAKYRGLKSFRTSSW--DPKE- 517
L+ FPDE++ A +R +YRGLK+ W D K+
Sbjct: 460 LSPEEEERQLREFRDMEKEDREFPDEIELEPSESAIERLKRYRGLKNLYNCDWQVDEKDP 519
Query: 518 SLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLC 577
S P E+ R+ + T+ + +K E +N ++ A +R+ I+ P + ++
Sbjct: 520 SSPAEWKRLLRIGNYKNTKNRI----IK-ETKNEAQAI-AGDRIRMFIR-FPKFLLEKIQ 572
Query: 578 EMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSS 637
+ ++ GLL HE K +V++FS+++ + YD P+ ++E ++ G R++ +P+FS
Sbjct: 573 D-PKQLLFAVYGLLLHEHKNAVVNFSLQRWEQYDKPVPSQEPIVVQYGVRRYTIQPLFSQ 631
Query: 638 -DNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLK-SXXXXXXXXXXXXXSLRSI 695
N ++ HK ERFLH SVA+ AP+ F P I K S + +
Sbjct: 632 GSNSPNNVHKYERFLHPDTVSVATCIAPVDFTQSPAIFFKPSPTDAKNIELIGHGTFLNA 691
Query: 696 DPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFK 735
D RI+ K+ +LTG+P R K VRYMF PEDV WFK
Sbjct: 692 DHSRILAKRAILTGHPFRFHKTVVTVRYMFFRPEDVEWFK 731
>POMBASE|SPAC23H4.15 [details] [associations]
symbol:SPAC23H4.15 "ribosome biogenesis protein Tsr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
[GO:0043021 "ribonucleoprotein complex binding" evidence=ISO]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 PomBase:SPAC23H4.15
GO:GO:0005737 EMBL:CU329670 GO:GO:0005730 GO:GO:0043021
GO:GO:0006364 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP PIR:T38313
RefSeq:NP_593391.1 STRING:O13956 EnsemblFungi:SPAC23H4.15.1
GeneID:2541779 KEGG:spo:SPAC23H4.15 OrthoDB:EOG4BS0TS
NextBio:20802869 Uniprot:O13956
Length = 783
Score = 514 (186.0 bits), Expect = 6.5e-49, P = 6.5e-49
Identities = 164/589 (27%), Positives = 275/589 (46%)
Query: 166 IDSFGNQCLSVFRSLGLPSTAVLIRDLPT--DLKKRKDLKKMCISSLTSEFPEDCKFYAA 223
+D FG + + G+ S ++ DL LK R ++KK S + F + + +AA
Sbjct: 165 VDEFGELIVRTTQGQGISSVLSMVHDLSEVDSLKTRNEVKKSLQSFMNFFFSDQERVFAA 224
Query: 224 DTKDELHKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCL 283
D + + HWR+ R +L++Q++ ++G LL+ G +R L
Sbjct: 225 DVSQDALNVMRALCTSHPRGIHWRDSRSYLLSQEISY-----SNGN--LLVRGIVRGKGL 277
Query: 284 SVNQLVHISGAGDFQLGKIEILKDPFPL-NARKESDAMESDEIHDLEVIRTLSP----DP 338
N+L+HI G GDF + +I + P + N+R S M+ D ++ SP D
Sbjct: 278 DPNRLIHIQGFGDFAINRI--YEAPQGIQNSRGIS--MDEDTNLTGGLVELCSPTQEQDS 333
Query: 339 LK-LEPLL--VENVPDPLAGEQTWPTEA--EMAEADQNQKHRKQKKRALPRGTSEYQAAW 393
L+ L P++ ++ D G++ + D ++ KR +P+GTS YQA W
Sbjct: 334 LESLGPIIDDMDTDMDSEVGKEASRGVRLDDFYYFDDEEEPVAVAKR-VPKGTSTYQATW 392
Query: 394 IVXXXXXXXXXXXXXXXXGMVLDQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTENDS 453
I ++ DQ+++ + D D+++ DD
Sbjct: 393 IPDEDEESDQYSDVEDTEVIIEDQDNQEISNHVAEEKIDSDEEET------IDDAKSEMF 446
Query: 454 VMMEGEILTRXXXXXXXXXXXXXXXXXXXFPDEVDTPLDVPARKRFAKYRGLKSFRTSSW 513
V + E R FPDEV+ + AR+RF KYRGL+S TS W
Sbjct: 447 VDLSEEEEVRQYEEYRKKQKELQEELE--FPDEVELQPNELARERFKKYRGLRSLYTSQW 504
Query: 514 DPKE---SLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPA-SLYVRLHIKEVP 569
D E + P E+ ++F F+ + R K+ F ++Q + ++ P ++YV L + VP
Sbjct: 505 DADEYDPNEPREWRQLFKFENY-RNLKNKF-----LKQPFIGEAKPGKAVYVEL--RNVP 556
Query: 570 AGIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQF 629
I + + L+ LLQ+E+K++V F+ +H Y+ PI++KEEL+ +G R+F
Sbjct: 557 IEIFEYYNK--PWNLLVLYSLLQYENKLTVSQFTAMQHSEYEEPIESKEELLLQIGPRRF 614
Query: 630 VARPIFS---SDNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLKSXXXXXXXXX 686
+ RP++S + +++ K R+L +AS+ +PI F +P+I+ K
Sbjct: 615 MVRPLYSDPTASGASNNLQKYHRYLPPKQAVIASVISPIVFGNVPIIMFKKSSDNSLRLA 674
Query: 687 XXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFK 735
S + D + +I K+ VLTG+P +V K +RYMF NPEDV WFK
Sbjct: 675 ATG-SYVNCDTNSVIAKRAVLTGHPFKVHKKLVTIRYMFFNPEDVIWFK 722
Score = 319 (117.4 bits), Expect = 3.0e-25, P = 3.0e-25
Identities = 148/592 (25%), Positives = 254/592 (42%)
Query: 4 SRVQVNKSHKSRFSTKSS-RNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQKR 62
S + K KS+ ++KSS + +K + R G + V KA R K ++ KR
Sbjct: 7 STFKAKKPFKSKHASKSSLKEKYKNEV-EPHRSGPKNI-VHTSTKADRRNTAKQIQLNKR 64
Query: 63 LALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGT----GALSSTVSS 118
+ R G P+VI + L +V+ +V +LLR + E + S + S+
Sbjct: 65 TEVAMNNRIFGGKNGAPKVITIVPLCNNVDSWNVLTNLLRSIDPEASLPKFDKDSISYST 124
Query: 119 SKYRLRTSVL-QAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVF 177
+ R + ++L P + ++ KV+D +D FG +
Sbjct: 125 TIDRFKQNLLFLLPKREFYSLIDACKVSDYVIFVLSAVQE--------VDEFGELIVRTT 176
Query: 178 RSLGLPSTAVLIRDLPT--DLKKRKDLKKMCISSLTSEFPEDCKFYAAD-TKDELHKFLW 234
+ G+ S ++ DL LK R ++KK S + F + + +AAD ++D L+
Sbjct: 177 QGQGISSVLSMVHDLSEVDSLKTRNEVKKSLQSFMNFFFSDQERVFAADVSQDALNVMRA 236
Query: 235 LFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLVHISGA 294
L + HWR+ R +L++Q++ ++G LL+ G +R L N+L+HI G
Sbjct: 237 LCTSHPRGI-HWRDSRSYLLSQEISY-----SNGN--LLVRGIVRGKGLDPNRLIHIQGF 288
Query: 295 GDFQLGKIEILKDPFPL-NARKESDAMESDEIHDLEVIRTLSP----DPLK-LEPLL--V 346
GDF + +I + P + N+R S M+ D ++ SP D L+ L P++ +
Sbjct: 289 GDFAINRI--YEAPQGIQNSRGIS--MDEDTNLTGGLVELCSPTQEQDSLESLGPIIDDM 344
Query: 347 ENVPDPLAGEQTWPTEA--EMAEADQNQKHRKQKKRALPRGTSEYQAAWIVXXXXXXXXX 404
+ D G++ + D ++ KR +P+GTS YQA WI
Sbjct: 345 DTDMDSEVGKEASRGVRLDDFYYFDDEEEPVAVAKR-VPKGTSTYQATWIPDEDEESDQY 403
Query: 405 XXXXXXXGMVLDQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTENDSVMMEGEILTRX 464
++ DQ+++ + D D+++ DD V + E R
Sbjct: 404 SDVEDTEVIIEDQDNQEISNHVAEEKIDSDEEET------IDDAKSEMFVDLSEEEEVRQ 457
Query: 465 XXXXXXXXXXXXXXXXXXFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKE---SLPP 521
FPDEV+ + AR+RF KYRGL+S TS WD E + P
Sbjct: 458 YEEYRKKQKELQEELE--FPDEVELQPNELARERFKKYRGLRSLYTSQWDADEYDPNEPR 515
Query: 522 EYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPA-SLYVRLHIKEVPAGI 572
E+ ++F F+ + R K+ F ++Q + ++ P ++YV L + VP I
Sbjct: 516 EWRQLFKFENY-RNLKNKF-----LKQPFIGEAKPGKAVYVEL--RNVPIEI 559
>UNIPROTKB|G4NCG9 [details] [associations]
symbol:MGG_01087 "Ribosome biogenesis protein TSR1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
[GO:0043021 "ribonucleoprotein complex binding" evidence=ISS]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 GO:GO:0005737 GO:GO:0005730
EMBL:CM001235 GO:GO:0043581 GO:GO:0043021 GO:GO:0006364
InterPro:IPR007034 Pfam:PF04950 KO:K14799 RefSeq:XP_003717850.1
EnsemblFungi:MGG_01087T0 GeneID:2674231 KEGG:mgr:MGG_01087
Uniprot:G4NCG9
Length = 810
Score = 388 (141.6 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 87/259 (33%), Positives = 135/259 (52%)
Query: 483 FPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESL---PPEYARIFAFDKFTRTQKHV 539
FPDE++ +V AR+R A+YRGLKS RTS W+ +E P ++ R+ + ++
Sbjct: 484 FPDEIELHPNVLARERLARYRGLKSLRTSKWEEEEDRAHEPEDWRRLLQVPDYNGSKS-- 541
Query: 540 FANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSV 599
+ +E + V V +H+K VPA +A R P+ LL+HE+K SV
Sbjct: 542 -----RCTREALVGGVAPGTRVAVHLKGVPASVA---ASYDGRKPITMFSLLRHENKQSV 593
Query: 600 LHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSD-NMNSDKHKMERFLHAGCFSV 658
++F + + +KAKEEL+ G R+ V P+FS N +D HK RFLH G +V
Sbjct: 594 VNFLINLSSEFPRSLKAKEELVIQYGPRRLVINPLFSQGGNTPNDVHKYGRFLHPGQSAV 653
Query: 659 ASIYAPICFPPLPLIVLKSXXXXXXXXXXXXXSLRSIDPD--RIILKKIVLTGYPQRVSK 716
A+ P+ + P+P + K + ++ P R++ K+++LTG+P + K
Sbjct: 654 ATFVGPVIWGPVPALFFKKQEGSDDLSLTLVGTGTALPPSTGRVVAKRVILTGHPYHIHK 713
Query: 717 LKAIVRYMFHNPEDVRWFK 735
+RYMF N EDV WFK
Sbjct: 714 KIVTIRYMFFNREDVEWFK 732
Score = 182 (69.1 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 96/408 (23%), Positives = 165/408 (40%)
Query: 9 NKSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQKRLALLKE 68
NK KSR +TK + +T AK K K +++ R R QK L +E
Sbjct: 16 NKPFKSRKATKGAI---RTLAKGKVPTEKGQRKTQHQQVMSKLDRRNQSR-QKLLNKQRE 71
Query: 69 KRASS----GIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSST-VSSSKYRL 123
R+ + G PR + + L A + L L E + T VS +++
Sbjct: 72 HRSDNQVFAGRDGAPRNVAVIPLCADGDAADAIRSLNLSLDIETEVSPGCTRVSVDRFKQ 131
Query: 124 RTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRSLGLP 183
+ + DL C++ A+VAD +D G L S G+
Sbjct: 132 KLAYFPVVR-DLATCLDAARVADFVVLVLSAEVE--------VDQLGELILRSVESQGVS 182
Query: 184 STAVLIRDLPT--DLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDELHKFLWLFKEQRL 241
+ +++ L +K+R + S + P+ K Y+ D + E L +
Sbjct: 183 TVFTVVQGLNKVEPVKQRLSIVDSLKSYIKYYHPDQDKIYSLDNRQECSN---LMRSVCS 239
Query: 242 TVPH---WRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLVHISGAGDFQ 298
T P WR++R +++ + V A + + T G +R L ++LV + G FQ
Sbjct: 240 TTPKGVVWRDERSWMLVEDVQFPASESDLTVVT----GVVRGKGLKADRLVQVGDWGTFQ 295
Query: 299 LGKIEILKDPFPLNARKESD-AMESDEIHDLEVIRTLSPDPLKLEPLLVENV----PDPL 353
+ KI PL+ +K + +M D+ E + + D L+ L E + D +
Sbjct: 296 IEKIMAA----PLSTKKAKEGSMAVDDAPSQEPLDVPTDDRDDLDELAPEEIVMEDDDEM 351
Query: 354 AGEQTW---PTEAEMAEADQN-----QKHRKQKKRALPRGTSEYQAAW 393
QT PT+ + D + ++ + Q ++ LP+GTS+YQ+AW
Sbjct: 352 DDAQTSASAPTKKGVLLDDHHYFSDDEEGQPQIRKRLPKGTSKYQSAW 399
Score = 40 (19.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 550 NMDDSVPASLYVRLHI-KEVPAGIAHRLCEMAERSPLIASGLLQHE 594
N DSV SLY R+ K VP L E L+ +G + +
Sbjct: 765 NPQDSVGVSLYKRVWPRKSVP--FRGELVGAEEAPKLVEAGAMDED 808
>ASPGD|ASPL0000007982 [details] [associations]
symbol:AN6266 species:162425 "Emericella nidulans"
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
GO:GO:0005634 GO:GO:0042254 EMBL:AACD01000107 EMBL:BN001301
InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177 HOGENOM:HOG000165026
KO:K14799 OMA:DAEQTWP OrthoDB:EOG4BS0TS RefSeq:XP_663870.1
STRING:Q5AZL4 EnsemblFungi:CADANIAT00006724 GeneID:2871002
KEGG:ani:AN6266.2 Uniprot:Q5AZL4
Length = 810
Score = 489 (177.2 bits), Expect = 9.9e-45, P = 9.9e-45
Identities = 193/784 (24%), Positives = 330/784 (42%)
Query: 5 RVQVNKSHKSRFSTKSSRNLHKTAAKDK-SRIGKSDCNVAKGAKAARVQRNKMLRDQKRL 63
R +HK S +S+ K AK K R + +++ R R QK+
Sbjct: 12 RSTTKTTHKPYKSGHASKRALKDQAKGKVERAERGTRKTPHQQLMSKLDRRNQAR-QKQQ 70
Query: 64 ALLKEKRAS----SGIASPPRVIVLFGLSASVNLNSVREDLLRQL--SSEGTGALSSTVS 117
+E+ + SG PR + + LS ++ ++ + L + +S+ S V
Sbjct: 71 NKQQERAQAISIFSGQNGAPRHVAIVPLSIDIDTTAIIKALNESVDVTSDVFPDTISRVR 130
Query: 118 SSKYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVF 177
++R + A + DL+ ++ ++AD ++ G L
Sbjct: 131 IDRFRQNLQYIPAKY-DLMSALDACRMADFVVLAISAHLE--------VEEQGELLLRSI 181
Query: 178 RSLGLPSTAVLIRDLP--TDLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDELHKFLWL 235
G+ + +++ L KKR + S L +P K + D++ E +
Sbjct: 182 EGQGVSNVIAVVQGLDKINPPKKRPQVAGSLKSFLNHFYPSIDKVLSIDSRQECSNAIRS 241
Query: 236 FKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCT-LLLHGYLRAHCLSVNQLVHISGA 294
WR+ R +++ + DV + S + ++L G +R L ++LVH+ G
Sbjct: 242 LCTATPKGIRWRDDRSWMLIE--DVKWPESASPEVDDVVLTGVVRGKGLKADRLVHVPGW 299
Query: 295 GDFQLGKIEILKDPFPLNARKESDAMESDEIH----------DLEVIRTLSPDPLKLEPL 344
GDFQ+ I P P K DAM DE D + + T++P+ +++E
Sbjct: 300 GDFQIDSITAA--PLPTARSKRDDAMNVDESEAPQLLDSPSADRDDLATVAPEEIEMEDD 357
Query: 345 LVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIVXXXXXXXXX 404
+E++PD ++ D H K + LP+GTSEYQ+ W +
Sbjct: 358 -IESMPDTDRKGVLLDDHHYFSDDDD---HIPAKPKRLPKGTSEYQSHWFLDDVSDSGSD 413
Query: 405 XXXXXXX-GMVLD----QEDRGFP-GYEG-TNNSDIDDDQASLNFRYADDGTENDSVMME 457
M +D ED FP ++ T + Q+ + + D E+++ +E
Sbjct: 414 VMDDDDEEDMQMDVSGAPEDGVFPDNHDAMTEGGPSEYPQSEM---FLDPSPEDEAQQLE 470
Query: 458 GEILTRXXXXXXXXXXXXXXXXXXXFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKE 517
+R FPDE++ +V AR+R A+YRG+KS +TS W+ E
Sbjct: 471 EYRASRRNEAKDDLE----------FPDEIELHPNVLARERLARYRGMKSLKTSPWNTAE 520
Query: 518 SLP--PE-YARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAH 574
P PE + R+ F + ++ + AL V V +H++ VPA + +
Sbjct: 521 DRPHEPEDWRRLLQFGDYKGSKNRILREALV-------GGVNPGTRVDVHLRAVPALLRN 573
Query: 575 RLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPI 634
R PL LL+HE K +V++ ++ + + PIK+K+ELI G R+ + P+
Sbjct: 574 R------PQPLSLFSLLRHEHKHTVVNINMHLNAAVEEPIKSKQELIVQYGPRRLIVNPV 627
Query: 635 FSS-DNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLKSXXXXX----------- 682
FSS DN ++ HK +RFLH G +VA+ P+ + +P++V KS
Sbjct: 628 FSSADNTPNNVHKFDRFLHPGRSAVATWIGPLTWGSVPVLVFKSRKTSADPEILDSADAP 687
Query: 683 ---XXXXXXXXSLRSI--------DPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDV 731
+L I DP R++ K+ ++TG+P ++ K VRYMF N EDV
Sbjct: 688 ESTTAVGFSTSTLELIGTGTVVAPDPTRVVAKRAIITGHPYKIHKRVVTVRYMFFNAEDV 747
Query: 732 RWFK 735
WFK
Sbjct: 748 NWFK 751
>CGD|CAL0002141 [details] [associations]
symbol:TSR1 species:5476 "Candida albicans" [GO:0043021
"ribonucleoprotein complex binding" evidence=IGI] [GO:0006364 "rRNA
processing" evidence=IGI] [GO:0030686 "90S preribosome"
evidence=IGI] [GO:0005737 "cytoplasm" evidence=IGI] [GO:0005730
"nucleolus" evidence=IGI] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 CGD:CAL0002141 GO:GO:0005737 GO:GO:0005730
EMBL:AACQ01000073 EMBL:AACQ01000072 GO:GO:0043021 GO:GO:0030686
GO:GO:0006364 InterPro:IPR007034 Pfam:PF04950 InterPro:IPR009000
SUPFAM:SSF50447 eggNOG:COG5177 KO:K14799 RefSeq:XP_716172.1
RefSeq:XP_716255.1 ProteinModelPortal:Q5A346 STRING:Q5A346
GeneID:3642135 GeneID:3642187 KEGG:cal:CaO19.13775
KEGG:cal:CaO19.6417 Uniprot:Q5A346
Length = 842
Score = 330 (121.2 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 103/378 (27%), Positives = 167/378 (44%)
Query: 379 KRALPRGTSEYQAAWIVXXXXXXXXXXXXXXXXGMVLDQEDRGFPGYEGTNNSDIDDDQA 438
K+ +PRGTSEYQ W V L+++ G G E + + +DDD
Sbjct: 423 KKLVPRGTSEYQGRWFVDDVLDEDASD---------LEEQREG-EGEEEEDANIVDDDMM 472
Query: 439 SLNFRYADDGTEN--DSVMMEGEILTRXXXXXXXXXXXXXXXXXXXFPDEVDTPLDVPAR 496
+ ADD T++ DS MM + L+ FPDE++ + A
Sbjct: 473 VEDNMEADDITDSIHDSEMMHVD-LSPEEESRQLEEYRSLAKDDLEFPDEIELHPNESAI 531
Query: 497 KRFAKYRGLKSFRTSSWDPKE---SLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDD 553
+R +RG+KS WD E P R+F + T+ V +K +
Sbjct: 532 ERLKGFRGVKSLGNCDWDYDEYDPEAPSILKRLFQVSNYKATKNKVNKQFIKQTE----- 586
Query: 554 SVPASLYVRLHIKEVPAGIAHRLCEM---AERSPLIASGLLQHESKMSVLHFSVKKHDTY 610
+ A VRL+I +P G ++ + + P LL+HE K+ V +FS + Y
Sbjct: 587 -ITAGNRVRLYII-IPPGASNNVSSVIGSCSSVPFPVYELLEHEHKLGVCNFSFEAWQDY 644
Query: 611 DAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDK-HKMERFLH----AGCFSVASIYAPI 665
+ PI KE++I G R+ + +P+++ N N + HK+E F+H G +A+ P+
Sbjct: 645 EKPIINKEQIIVQYGPRRQIIQPLYNQANNNPNNVHKLENFVHHNQGGGGAIIATAITPV 704
Query: 666 CFPPLPLIVLKSXXXXXXXXXXXXXSLRSI--------DPDRIILKKIVLTGYPQRVSKL 717
F P + K S+ + D RI+++++VLTG+P ++ K
Sbjct: 705 LFTNSPTLFFKIHPDADDSSNSNGGSVEFVGKGTYLGSDAKRIMVQRVVLTGHPIKIHKR 764
Query: 718 KAIVRYMFHNPEDVRWFK 735
+RYMF N ED+ +FK
Sbjct: 765 VVTIRYMFFNREDINYFK 782
Score = 319 (117.4 bits), Expect = 3.1e-28, Sum P(2) = 3.1e-28
Identities = 121/463 (26%), Positives = 202/463 (43%)
Query: 246 WRNQRPFLMAQKVDVVADD---CNSGKCTLLLHGYLRAHCLSVNQLVHISGAGDFQLGKI 302
WR+ R +L+A KV++ + + + +++ G +R +VN+LVH+ G GDFQL K+
Sbjct: 271 WRDSRGWLVADKVEIFNPNGMPVENQQQMMVVEGMVRGVGFNVNRLVHLPGLGDFQLHKL 330
Query: 303 EILKDPFPLNA-RKESDAMESDEIHDLEVIRTLSPDPLK--LEPL---------LVENVP 350
E L N+ R M+ D +D + T P+ + L+ L +E+
Sbjct: 331 EKLARKARGNSSRNHRGGMDIDTGNDGDAEETFLPNEQQESLDELNPDEGIDMGTMEDDD 390
Query: 351 DPLAGEQTWP-TEAEMAEADQNQKHRKQK---KRALPRGTSEYQAAWIVXXXXXXXXXXX 406
D L + +E ++ + N K+ +PRGTSEYQ W V
Sbjct: 391 DFLNNDNFGVRSEGKIYFDNGNSNGTSSSSTGKKLVPRGTSEYQGRWFVDDVLDEDASD- 449
Query: 407 XXXXXGMVLDQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTEN--DSVMMEGEILTRX 464
L+++ G G E + + +DDD + ADD T++ DS MM + L+
Sbjct: 450 --------LEEQREG-EGEEEEDANIVDDDMMVEDNMEADDITDSIHDSEMMHVD-LSPE 499
Query: 465 XXXXXXXXXXXXXXXXXXFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKE---SLPP 521
FPDE++ + A +R +RG+KS WD E P
Sbjct: 500 EESRQLEEYRSLAKDDLEFPDEIELHPNESAIERLKGFRGVKSLGNCDWDYDEYDPEAPS 559
Query: 522 EYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEM-- 579
R+F + T+ V +K + + A VRL+I +P G ++ + +
Sbjct: 560 ILKRLFQVSNYKATKNKVNKQFIKQTE------ITAGNRVRLYII-IPPGASNNVSSVIG 612
Query: 580 -AERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSD 638
P LL+HE K+ V +FS + Y+ PI KE++I G R+ + +P+++
Sbjct: 613 SCSSVPFPVYELLEHEHKLGVCNFSFEAWQDYEKPIINKEQIIVQYGPRRQIIQPLYNQA 672
Query: 639 NMNSDK-HKMERFLH----AGCFSVASIYAPICFPPLPLIVLK 676
N N + HK+E F+H G +A+ P+ F P + K
Sbjct: 673 NNNPNNVHKLENFVHHNQGGGGAIIATAITPVLFTNSPTLFFK 715
Score = 77 (32.2 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 47/229 (20%), Positives = 98/229 (42%)
Query: 11 SHKS--RFSTKSSRNLHKTAAKDKSRI-GKSD--CNVAKGAKAARV-----QRN--KMLR 58
SH++ + K ++ H T + K+RI GK + N + G+K+++V ++N K R
Sbjct: 4 SHRNTLKHDHKPFKSKHATKGQIKARIKGKVEKSSNSSGGSKSSKVVSKLERKNLSKQQR 63
Query: 59 DQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQ---LSSEGT-----G 110
D K L K+ G + +++ + L+ ++ + L + S+E G
Sbjct: 64 DNKILETKLTKKLFEGNSGAEKIVTIITLTNDLSAVDIANRLFNEQEDTSNESITRFDFG 123
Query: 111 ALSST-VSSSKYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSF 169
S T ++ +K++ V+ +++ ++ A+V+D +SF
Sbjct: 124 YPSVTNINIAKFKTNLKVIIPKQNNMISILDAAQVSDFVLLGISATEEIGE------NSF 177
Query: 170 GNQCLSVFRSLGLPSTAVLIRDLPTDLKKRK---DLKKMCISSLTSEFP 215
G L + G+ +T ++ ++ + KR D+K+ S FP
Sbjct: 178 GETVLRALIAQGISTTIGVLPNIVSAYPKRNLQLDVKQSLQSFYHHFFP 226
Score = 38 (18.4 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 7 QVNKSHKSRFSTKSSRNLHKTAAKDKSR 34
+V KS S +KSS+ + K K+ S+
Sbjct: 33 KVEKSSNSSGGSKSSKVVSKLERKNLSK 60
>UNIPROTKB|Q5A346 [details] [associations]
symbol:tsr1 "Putative uncharacterized protein TSR1"
species:237561 "Candida albicans SC5314" [GO:0005730 "nucleolus"
evidence=IGI] [GO:0005737 "cytoplasm" evidence=IGI] [GO:0006364
"rRNA processing" evidence=IGI] [GO:0030686 "90S preribosome"
evidence=IGI] [GO:0043021 "ribonucleoprotein complex binding"
evidence=IGI] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
CGD:CAL0002141 GO:GO:0005737 GO:GO:0005730 EMBL:AACQ01000073
EMBL:AACQ01000072 GO:GO:0043021 GO:GO:0030686 GO:GO:0006364
InterPro:IPR007034 Pfam:PF04950 InterPro:IPR009000 SUPFAM:SSF50447
eggNOG:COG5177 KO:K14799 RefSeq:XP_716172.1 RefSeq:XP_716255.1
ProteinModelPortal:Q5A346 STRING:Q5A346 GeneID:3642135
GeneID:3642187 KEGG:cal:CaO19.13775 KEGG:cal:CaO19.6417
Uniprot:Q5A346
Length = 842
Score = 330 (121.2 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 103/378 (27%), Positives = 167/378 (44%)
Query: 379 KRALPRGTSEYQAAWIVXXXXXXXXXXXXXXXXGMVLDQEDRGFPGYEGTNNSDIDDDQA 438
K+ +PRGTSEYQ W V L+++ G G E + + +DDD
Sbjct: 423 KKLVPRGTSEYQGRWFVDDVLDEDASD---------LEEQREG-EGEEEEDANIVDDDMM 472
Query: 439 SLNFRYADDGTEN--DSVMMEGEILTRXXXXXXXXXXXXXXXXXXXFPDEVDTPLDVPAR 496
+ ADD T++ DS MM + L+ FPDE++ + A
Sbjct: 473 VEDNMEADDITDSIHDSEMMHVD-LSPEEESRQLEEYRSLAKDDLEFPDEIELHPNESAI 531
Query: 497 KRFAKYRGLKSFRTSSWDPKE---SLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDD 553
+R +RG+KS WD E P R+F + T+ V +K +
Sbjct: 532 ERLKGFRGVKSLGNCDWDYDEYDPEAPSILKRLFQVSNYKATKNKVNKQFIKQTE----- 586
Query: 554 SVPASLYVRLHIKEVPAGIAHRLCEM---AERSPLIASGLLQHESKMSVLHFSVKKHDTY 610
+ A VRL+I +P G ++ + + P LL+HE K+ V +FS + Y
Sbjct: 587 -ITAGNRVRLYII-IPPGASNNVSSVIGSCSSVPFPVYELLEHEHKLGVCNFSFEAWQDY 644
Query: 611 DAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDK-HKMERFLH----AGCFSVASIYAPI 665
+ PI KE++I G R+ + +P+++ N N + HK+E F+H G +A+ P+
Sbjct: 645 EKPIINKEQIIVQYGPRRQIIQPLYNQANNNPNNVHKLENFVHHNQGGGGAIIATAITPV 704
Query: 666 CFPPLPLIVLKSXXXXXXXXXXXXXSLRSI--------DPDRIILKKIVLTGYPQRVSKL 717
F P + K S+ + D RI+++++VLTG+P ++ K
Sbjct: 705 LFTNSPTLFFKIHPDADDSSNSNGGSVEFVGKGTYLGSDAKRIMVQRVVLTGHPIKIHKR 764
Query: 718 KAIVRYMFHNPEDVRWFK 735
+RYMF N ED+ +FK
Sbjct: 765 VVTIRYMFFNREDINYFK 782
Score = 319 (117.4 bits), Expect = 3.1e-28, Sum P(2) = 3.1e-28
Identities = 121/463 (26%), Positives = 202/463 (43%)
Query: 246 WRNQRPFLMAQKVDVVADD---CNSGKCTLLLHGYLRAHCLSVNQLVHISGAGDFQLGKI 302
WR+ R +L+A KV++ + + + +++ G +R +VN+LVH+ G GDFQL K+
Sbjct: 271 WRDSRGWLVADKVEIFNPNGMPVENQQQMMVVEGMVRGVGFNVNRLVHLPGLGDFQLHKL 330
Query: 303 EILKDPFPLNA-RKESDAMESDEIHDLEVIRTLSPDPLK--LEPL---------LVENVP 350
E L N+ R M+ D +D + T P+ + L+ L +E+
Sbjct: 331 EKLARKARGNSSRNHRGGMDIDTGNDGDAEETFLPNEQQESLDELNPDEGIDMGTMEDDD 390
Query: 351 DPLAGEQTWP-TEAEMAEADQNQKHRKQK---KRALPRGTSEYQAAWIVXXXXXXXXXXX 406
D L + +E ++ + N K+ +PRGTSEYQ W V
Sbjct: 391 DFLNNDNFGVRSEGKIYFDNGNSNGTSSSSTGKKLVPRGTSEYQGRWFVDDVLDEDASD- 449
Query: 407 XXXXXGMVLDQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTEN--DSVMMEGEILTRX 464
L+++ G G E + + +DDD + ADD T++ DS MM + L+
Sbjct: 450 --------LEEQREG-EGEEEEDANIVDDDMMVEDNMEADDITDSIHDSEMMHVD-LSPE 499
Query: 465 XXXXXXXXXXXXXXXXXXFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKE---SLPP 521
FPDE++ + A +R +RG+KS WD E P
Sbjct: 500 EESRQLEEYRSLAKDDLEFPDEIELHPNESAIERLKGFRGVKSLGNCDWDYDEYDPEAPS 559
Query: 522 EYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEM-- 579
R+F + T+ V +K + + A VRL+I +P G ++ + +
Sbjct: 560 ILKRLFQVSNYKATKNKVNKQFIKQTE------ITAGNRVRLYII-IPPGASNNVSSVIG 612
Query: 580 -AERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSD 638
P LL+HE K+ V +FS + Y+ PI KE++I G R+ + +P+++
Sbjct: 613 SCSSVPFPVYELLEHEHKLGVCNFSFEAWQDYEKPIINKEQIIVQYGPRRQIIQPLYNQA 672
Query: 639 NMNSDK-HKMERFLH----AGCFSVASIYAPICFPPLPLIVLK 676
N N + HK+E F+H G +A+ P+ F P + K
Sbjct: 673 NNNPNNVHKLENFVHHNQGGGGAIIATAITPVLFTNSPTLFFK 715
Score = 77 (32.2 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 47/229 (20%), Positives = 98/229 (42%)
Query: 11 SHKS--RFSTKSSRNLHKTAAKDKSRI-GKSD--CNVAKGAKAARV-----QRN--KMLR 58
SH++ + K ++ H T + K+RI GK + N + G+K+++V ++N K R
Sbjct: 4 SHRNTLKHDHKPFKSKHATKGQIKARIKGKVEKSSNSSGGSKSSKVVSKLERKNLSKQQR 63
Query: 59 DQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQ---LSSEGT-----G 110
D K L K+ G + +++ + L+ ++ + L + S+E G
Sbjct: 64 DNKILETKLTKKLFEGNSGAEKIVTIITLTNDLSAVDIANRLFNEQEDTSNESITRFDFG 123
Query: 111 ALSST-VSSSKYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSF 169
S T ++ +K++ V+ +++ ++ A+V+D +SF
Sbjct: 124 YPSVTNINIAKFKTNLKVIIPKQNNMISILDAAQVSDFVLLGISATEEIGE------NSF 177
Query: 170 GNQCLSVFRSLGLPSTAVLIRDLPTDLKKRK---DLKKMCISSLTSEFP 215
G L + G+ +T ++ ++ + KR D+K+ S FP
Sbjct: 178 GETVLRALIAQGISTTIGVLPNIVSAYPKRNLQLDVKQSLQSFYHHFFP 226
Score = 38 (18.4 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 7 QVNKSHKSRFSTKSSRNLHKTAAKDKSR 34
+V KS S +KSS+ + K K+ S+
Sbjct: 33 KVEKSSNSSGGSKSSKVVSKLERKNLSK 60
>GENEDB_PFALCIPARUM|PF14_0494 [details] [associations]
symbol:PF14_0494 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
GO:GO:0005634 GO:GO:0042254 EMBL:AE014187 InterPro:IPR007034
Pfam:PF04950 KO:K14799 RefSeq:XP_001348668.1
ProteinModelPortal:Q8IKV7 IntAct:Q8IKV7 MINT:MINT-1637214
EnsemblProtists:PF14_0494:mRNA GeneID:812076 KEGG:pfa:PF14_0494
EuPathDB:PlasmoDB:PF3D7_1451900 HOGENOM:HOG000282050
ProtClustDB:CLSZ2501080 Uniprot:Q8IKV7
Length = 1029
Score = 192 (72.6 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 58/189 (30%), Positives = 91/189 (48%)
Query: 492 DVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFANALKMEQENM 551
++ AR+RF KYR L+SFRTS D E LP EY+RI+ ++ K+ ++ +
Sbjct: 624 NISARERFKKYRSLQSFRTSYVDVYEDLPLEYSRIYDYESSENLIKYSRKKFVQNCKIVN 683
Query: 552 DDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYD 611
+ Y IK + ++L P+I S LL E K++VL+ V + Y
Sbjct: 684 GEFTLTDTYCIFVIKN-DGKLLNKLNNKRNDIPVIVSSLLPFERKVTVLNMEVNRTIFYS 742
Query: 612 APIKAKEELIFHV--GFRQFVARPIFSSDNMNS--DKHKMERFLHAGCFSVASIYAPICF 667
+++K+ IF + GFR F+ P+FS + K K E+ L G VASI+
Sbjct: 743 DKVESKD--IFEIICGFRHFIGCPVFSEQIIKGPQSKGKYEKHLKHGKKYVASIFGFTTV 800
Query: 668 PPLPLIVLK 676
P+ +K
Sbjct: 801 TAAPVFFIK 809
Score = 104 (41.7 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 694 SIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFK 735
S D RII+K+I L G ++ K KA++R MF+NP+D+ +FK
Sbjct: 907 SCDCKRIIMKRISLCGKIFKIHKKKAVIRNMFYNPKDINYFK 948
Score = 98 (39.6 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 67/321 (20%), Positives = 131/321 (40%)
Query: 7 QVNKSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQKRLALL 66
Q K + KS +N+ K K+K+ I + N+ + + ++ L++++
Sbjct: 13 QFKKIKNQKKKKKSIKNIQKK--KNKNDINEKYSNILQRKVQSYYSKSDQLKNER----- 65
Query: 67 KEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSS---------TVS 117
+EK + + +L V++ S +++ ++ L E + TV
Sbjct: 66 EEKAKHIPFYNCLNICLLV-FHEDVDILSFKKEFIKYLCEENDEHIDIDNIKLYDIYTVH 124
Query: 118 SS--KYRLRTS--VLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQC 173
S+ K + R S V P D+ G ++ K AD+ D G +
Sbjct: 125 SNDKKKKKRKSFVVYDIPR-DIYGIIDGTKCADVVLCLFKDGSIENSCF----DELGYKL 179
Query: 174 LSVFRSLGLPSTAVLIRDLPTDLKKRKDLKKMCISSLTSEFPEDCK-FYAADTKD-ELHK 231
LSV + G+PS ++ T++ K K + SEF D K F+ ++ K+ + K
Sbjct: 180 LSVLKIQGVPS--IIGIGYNTNMSN-KGSHKFVMRYFNSEFTMDDKIFFISENKNSDFQK 236
Query: 232 FLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDC--NSGKCTLLLHGYLRAHCLSVNQLV 289
++ +R R ++MA D C NS + + G+++ + + +
Sbjct: 237 LYNEITNMKIKNVSYREGRGYMMA-------DSCAYNSENDCIYIKGFIKGVGFNYHNPI 289
Query: 290 HISGAGDFQLGKI---EILKD 307
HI+ GD+ + I +ILK+
Sbjct: 290 HITDVGDYYIDNIYLIDILKE 310
Score = 37 (18.1 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 429 NNSDIDDDQA-SLNFRYADDGTE--NDSVMME 457
NN DI DD ++ D+ +E ND +E
Sbjct: 579 NNDDISDDITDNITVNETDNKSEDYNDDSCIE 610
>UNIPROTKB|Q8IKV7 [details] [associations]
symbol:PF14_0494 "Ribosome biogenesis protein tsr1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
GO:GO:0005634 GO:GO:0042254 EMBL:AE014187 InterPro:IPR007034
Pfam:PF04950 KO:K14799 RefSeq:XP_001348668.1
ProteinModelPortal:Q8IKV7 IntAct:Q8IKV7 MINT:MINT-1637214
EnsemblProtists:PF14_0494:mRNA GeneID:812076 KEGG:pfa:PF14_0494
EuPathDB:PlasmoDB:PF3D7_1451900 HOGENOM:HOG000282050
ProtClustDB:CLSZ2501080 Uniprot:Q8IKV7
Length = 1029
Score = 192 (72.6 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 58/189 (30%), Positives = 91/189 (48%)
Query: 492 DVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFANALKMEQENM 551
++ AR+RF KYR L+SFRTS D E LP EY+RI+ ++ K+ ++ +
Sbjct: 624 NISARERFKKYRSLQSFRTSYVDVYEDLPLEYSRIYDYESSENLIKYSRKKFVQNCKIVN 683
Query: 552 DDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYD 611
+ Y IK + ++L P+I S LL E K++VL+ V + Y
Sbjct: 684 GEFTLTDTYCIFVIKN-DGKLLNKLNNKRNDIPVIVSSLLPFERKVTVLNMEVNRTIFYS 742
Query: 612 APIKAKEELIFHV--GFRQFVARPIFSSDNMNS--DKHKMERFLHAGCFSVASIYAPICF 667
+++K+ IF + GFR F+ P+FS + K K E+ L G VASI+
Sbjct: 743 DKVESKD--IFEIICGFRHFIGCPVFSEQIIKGPQSKGKYEKHLKHGKKYVASIFGFTTV 800
Query: 668 PPLPLIVLK 676
P+ +K
Sbjct: 801 TAAPVFFIK 809
Score = 104 (41.7 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 694 SIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFK 735
S D RII+K+I L G ++ K KA++R MF+NP+D+ +FK
Sbjct: 907 SCDCKRIIMKRISLCGKIFKIHKKKAVIRNMFYNPKDINYFK 948
Score = 98 (39.6 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 67/321 (20%), Positives = 131/321 (40%)
Query: 7 QVNKSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQKRLALL 66
Q K + KS +N+ K K+K+ I + N+ + + ++ L++++
Sbjct: 13 QFKKIKNQKKKKKSIKNIQKK--KNKNDINEKYSNILQRKVQSYYSKSDQLKNER----- 65
Query: 67 KEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSS---------TVS 117
+EK + + +L V++ S +++ ++ L E + TV
Sbjct: 66 EEKAKHIPFYNCLNICLLV-FHEDVDILSFKKEFIKYLCEENDEHIDIDNIKLYDIYTVH 124
Query: 118 SS--KYRLRTS--VLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQC 173
S+ K + R S V P D+ G ++ K AD+ D G +
Sbjct: 125 SNDKKKKKRKSFVVYDIPR-DIYGIIDGTKCADVVLCLFKDGSIENSCF----DELGYKL 179
Query: 174 LSVFRSLGLPSTAVLIRDLPTDLKKRKDLKKMCISSLTSEFPEDCK-FYAADTKD-ELHK 231
LSV + G+PS ++ T++ K K + SEF D K F+ ++ K+ + K
Sbjct: 180 LSVLKIQGVPS--IIGIGYNTNMSN-KGSHKFVMRYFNSEFTMDDKIFFISENKNSDFQK 236
Query: 232 FLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDC--NSGKCTLLLHGYLRAHCLSVNQLV 289
++ +R R ++MA D C NS + + G+++ + + +
Sbjct: 237 LYNEITNMKIKNVSYREGRGYMMA-------DSCAYNSENDCIYIKGFIKGVGFNYHNPI 289
Query: 290 HISGAGDFQLGKI---EILKD 307
HI+ GD+ + I +ILK+
Sbjct: 290 HITDVGDYYIDNIYLIDILKE 310
Score = 37 (18.1 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 429 NNSDIDDDQA-SLNFRYADDGTE--NDSVMME 457
NN DI DD ++ D+ +E ND +E
Sbjct: 579 NNDDISDDITDNITVNETDNKSEDYNDDSCIE 610
>UNIPROTKB|F1PKN2 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 CTD:9790 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950
GeneTree:ENSGT00550000074774 EMBL:AAEX03015389 EMBL:AAEX03015390
RefSeq:XP_534956.2 Ensembl:ENSCAFT00000011417 GeneID:477760
KEGG:cfa:477760 Uniprot:F1PKN2
Length = 1287
Score = 182 (69.1 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 64/263 (24%), Positives = 117/263 (44%)
Query: 485 DEVDTPLDVPARKRFA-KYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFANA 543
+E+D + ARK+ K R LK + +D ES Y FD + + H A
Sbjct: 816 EEIDPSTEESARKKHLDKKRKLKEMFDAEYDEGEST---Y-----FDDL-KGEMHKQAQL 866
Query: 544 LKMEQENMDDSVPAS-------LYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESK 596
+ E E+ DD +YVR+ I+ VP + P+I GL E
Sbjct: 867 NRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEF---VLNFDPHYPIILGGLGNSEGN 923
Query: 597 MSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKME---RFLHA 653
+ + +KKH Y +K+++ +IF VG+R+F P++ ++ N + ++ + +H
Sbjct: 924 VGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHC 983
Query: 654 GCFSVASIYAPICFPPLPLIVLKSXXXXXXXXXXXXXS-LRSIDPDRIILKKIVLTGYPQ 712
G A+ + PI + ++S + +D I+KK+ LTG+P
Sbjct: 984 G----ATFWGPITPQGTGFLAVQSVSDIMPDFRIAATGVILDLDKSIKIVKKLKLTGFPY 1039
Query: 713 RVSKLKAIVRYMFHNPEDVRWFK 735
++ K + ++ MF++ +V F+
Sbjct: 1040 KIFKNTSFIKGMFNSALEVAKFE 1062
Score = 161 (61.7 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 82/344 (23%), Positives = 151/344 (43%)
Query: 10 KSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRN-KMLRDQKRLALLKE 68
K H+ + S + K +D ++G + + KA VQ +M R R LK
Sbjct: 7 KKHRKKHSGPKAEKKKKRHLQDL-QLGDEEDARKRNPKAFAVQSAVRMARSFHRTQDLKT 65
Query: 69 KRASSGIAS------PPRVIVLFG---LSASVNLNSVREDLLRQLSSEGTGALSSTVSSS 119
K+ + PP V+V+ G + S + + + RQ +E G + T+ S
Sbjct: 66 KKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPV--TIVSG 123
Query: 120 KYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRS 179
K R R ++++ D+ +++AKVADL + +++F + L++ +
Sbjct: 124 KKR-RLTIIECGC-DINMMIDLAKVADLVLMLIDAS------FGFEMETF--EFLNICQV 173
Query: 180 LGLPSTAVLIRDLPTDLKKRKDLKK----MCISSLTSEFPEDCKFYAADT------KDEL 229
G P ++ L + K K LKK + T +P FY + E+
Sbjct: 174 HGFPKIMGILTHLDS-FKYNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEI 232
Query: 230 H---KFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVA--DDCNSG-KCT--LLLHGYLR-A 280
H +F+ + K + LT W+ P+++A +++ + +D + KC + L+GYLR A
Sbjct: 233 HNLGRFITVMKFRPLT---WQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGA 289
Query: 281 HCLSVNQLVHISGAGDFQLGKIEILKDPFPLNARKESDAMESDE 324
H + +Q +H+ G GDF + + L DP L +++ + E
Sbjct: 290 HLKNKSQ-IHMPGVGDFAVSDVSFLPDPCALPEQQKKRCLNEKE 332
>TAIR|locus:2033050 [details] [associations]
symbol:AT1G06720 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=RCA] [GO:0006606 "protein import into
nucleus" evidence=RCA] InterPro:IPR000795 InterPro:IPR012948
Pfam:PF00009 Pfam:PF08142 SMART:SM00785 GO:GO:0005525 EMBL:CP002684
GO:GO:0005634 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950 IPI:IPI00521552
RefSeq:NP_172157.1 UniGene:At.12092 ProteinModelPortal:F4IDR3
SMR:F4IDR3 PRIDE:F4IDR3 EnsemblPlants:AT1G06720.1 GeneID:837182
KEGG:ath:AT1G06720 Uniprot:F4IDR3
Length = 1147
Score = 191 (72.3 bits), Expect = 2.7e-21, Sum P(3) = 2.7e-21
Identities = 93/344 (27%), Positives = 155/344 (45%)
Query: 11 SHKSRFSTKSSRNLHKTAAKDKSRIGKS---DCNV-AKGAK----AARVQRNKMLRDQKR 62
SH+S + KS K + DK + G S N+ A G K A + + + ++QKR
Sbjct: 9 SHRSHRTPKSGPTARKKSELDKKKRGISVDKQKNLKAFGVKSVVHAKKAKHHAAEKEQKR 68
Query: 63 LALLKEKRASSGIASPPRVIVLFG---LSASVNLNSVREDLLRQLSSEGTGALSSTVSSS 119
L L K R + G A PP V+V+ G + S+ + S+ ++ +Q E G + T+
Sbjct: 69 LHLPKIDR-NYGEA-PPFVVVVQGPPGVGKSLVIKSLVKEFTKQNVPEVRGPI--TIVQG 124
Query: 120 KYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRS 179
K R R ++ P+ D+ ++ AKVADL + +++F + L++ +
Sbjct: 125 KQR-RFQFVECPN-DINAMVDCAKVADLALLVVDGSY------GFEMETF--EFLNIMQV 174
Query: 180 LGLPSTAVLIRDLP--TDLKKRKDLKKMCISSLTSEFPEDCK-FYAAD------TKDELH 230
G P ++ L D+KK + K +E K FY + T E+H
Sbjct: 175 HGFPRVMGVLTHLDKFNDVKKLRKTKHHLKHRFWTEIYHGAKLFYLSGLIHGKYTPREVH 234
Query: 231 ---KFLWLFKEQRLTVPHWRNQRPFLMAQKV-DVVADDC--NSGKC--TLLLHGYLRAHC 282
+F+ + K Q LT WR P+++ ++ DV + KC + + GYLR
Sbjct: 235 NLARFVIVIKPQPLT---WRTAHPYVLVDRLEDVTPPEKVQMDKKCDRNITVFGYLRGCN 291
Query: 283 LSVNQLVHISGAGDFQLGKIEILKDPFPL-NARKESDAMESDEI 325
VHI+G GDF + + L DP PL +A K+ + D++
Sbjct: 292 FKKRMKVHIAGVGDFIVAGVTALTDPCPLPSAGKKKGLRDRDKL 335
Score = 153 (58.9 bits), Expect = 2.7e-21, Sum P(3) = 2.7e-21
Identities = 46/218 (21%), Positives = 96/218 (44%)
Query: 521 PEYA-RIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEM 579
P YA ++ + T+ + + N L E Y+RL I VP + + E
Sbjct: 715 PGYADKLKEAQEITKQRNELEYNDLDEETRIELAGFRTGTYLRLEIHNVP----YEMVEF 770
Query: 580 AERS-PLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSD 638
+ P++ G+ E + + +KKH + +K ++ +I +G+R++ P+F+ +
Sbjct: 771 FDPCHPILVGGIGFGEDNVGYMQARLKKHRWHKKVLKTRDPIIVSIGWRRYQTIPVFAIE 830
Query: 639 NMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLKSXXXXXXXXXXXXXSL-RSIDP 697
+ N +H+M ++ +AS + P+ P + ++ S+ +
Sbjct: 831 DRNG-RHRMLKYTPEHMHCLASFWGPLVPPNTGFVAFQNLSNNQAGFRITATSVVLEFNH 889
Query: 698 DRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFK 735
I+KKI L G P ++ K A ++ MF + ++ F+
Sbjct: 890 QARIVKKIKLVGTPCKIKKKTAFIKDMFTSDLEIARFE 927
Score = 43 (20.2 bits), Expect = 2.7e-21, Sum P(3) = 2.7e-21
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 425 YEGTNNSDIDD-DQASLNFRYADDGTENDSVMMEG 458
+E ++ ++D D + +F ADD +D+ + +G
Sbjct: 481 FEEADDLELDSYDPDTYDFEEADDAESDDNEVEDG 515
Score = 41 (19.5 bits), Expect = 7.1e-10, Sum P(3) = 7.1e-10
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 590 LLQHESKMSVLHFSVKKHDTYDAPIKAKEELI 621
LLQH + KK Y+A KAK E I
Sbjct: 1089 LLQHHTMKKKKATDQKKRKEYEAE-KAKNEEI 1119
Score = 40 (19.1 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 8/20 (40%), Positives = 16/20 (80%)
Query: 362 EAEMAEADQ-NQKHRKQKKR 380
EAE A+ ++ N+K R++++R
Sbjct: 1110 EAEKAKNEEINKKRRREERR 1129
>POMBASE|SPBC31E1.06 [details] [associations]
symbol:bms1 "GTP binding protein Bms1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005730 "nucleolus" evidence=ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005819 "spindle" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0042255 "ribosome assembly"
evidence=ISS] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 PomBase:SPBC31E1.06 GO:GO:0005525
GO:GO:0005739 GO:GO:0005524 GO:GO:0005730 GO:GO:0005819
EMBL:CU329671 GO:GO:0003924 GO:GO:0006184 eggNOG:COG5192
GO:GO:0006364 HOGENOM:HOG000166882 KO:K14569 OMA:ASYGFEM
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 RefSeq:NP_595102.2
ProteinModelPortal:O94653 STRING:O94653 EnsemblFungi:SPBC31E1.06.1
GeneID:2540390 KEGG:spo:SPBC31E1.06 OrthoDB:EOG4GTPN1
NextBio:20801517 Uniprot:O94653
Length = 1121
Score = 191 (72.3 bits), Expect = 5.0e-21, Sum P(3) = 5.0e-21
Identities = 57/222 (25%), Positives = 102/222 (45%)
Query: 530 DKFTRTQKHVFANALKMEQENMDDSVP----------ASLYVRLHIKEVPAGIAHRLCEM 579
D +T +K A L + +E +D P A YVR+ I +VP
Sbjct: 686 DWYTE-EKEKIARQLVINREAFEDMDPESRAEIEGYRAGTYVRIVINDVPFEFVEHF--- 741
Query: 580 AERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDN 639
R P++ GLL +E + ++ +K+H + +K + LIF +G+R+F + P++S +
Sbjct: 742 DSRYPVVVGGLLPNEQRYGLVQVRIKRHRWHKKILKTNDPLIFSMGWRRFQSIPVYSISD 801
Query: 640 MNSDKHKMERFL--HAGCFSVASIYAPICFPPLPLIVLKSXXXXXXXXXX----XXXSLR 693
+ +++M ++ H CF + Y P P ++S S+
Sbjct: 802 SRT-RNRMLKYTPEHMHCFG--TFYGPFVAPNSGFCAVQSVANSFAKAGSFRIAATGSVL 858
Query: 694 SIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFK 735
+ID I+KK+ LTG P ++ K A ++ MF +P +V F+
Sbjct: 859 NIDQSTDIVKKLKLTGVPYKIFKNTAFIKKMFSSPLEVAKFE 900
Score = 148 (57.2 bits), Expect = 5.0e-21, Sum P(3) = 5.0e-21
Identities = 80/316 (25%), Positives = 137/316 (43%)
Query: 25 HKTAAKDKSRIGK-SDCNVAKGAKAARV-QRNKMLRDQKRLALLKEKRASSGIA------ 76
H +K ++ K SD + + KA V +M R R A + +K+ +
Sbjct: 11 HSGPKAEKKKLKKVSDGSASNNPKAFAVASAGRMARQAMRTADISQKKLHVPMVDRTPDE 70
Query: 77 SPPRVIVLFGLSASVNLNSVREDLLRQLS----SEGTGALSSTVSSSKYRLRTSVLQAPH 132
+PP VIV +++ + L+R+ S S+ TG + TV + K R R + L+ P+
Sbjct: 71 APPPVIVAVMGPPGTGKSTLIKSLVRRYSKYTISQITGPI--TVVAGKKR-RITFLECPN 127
Query: 133 GDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRSLGLPST-AVLIR- 190
DL +++AK+ADL + +++ + L++ G+P VL
Sbjct: 128 -DLSSMIDVAKIADLVLLLIDAN------FGFEMETM--EFLNILAPHGMPRIMGVLTHL 178
Query: 191 DLPTDLKKRKDLKKMCISSLTSEFPEDCK-FYAADTKD---------ELHKFLWLFKEQR 240
DL ++ KK +E + K FY + + L +F+ + K +
Sbjct: 179 DLFKKTSTLREAKKRLKHRFWTELYQGAKLFYLSGVLNGRYPDREILNLSRFISVMKFRP 238
Query: 241 LTVPHWRNQRPFLMAQKVD---VVADDCNSGKC--TLLLHGYLRAHCLSVNQL-VHISGA 294
L WRNQ P+L+A +++ + D + K + L+GYL L + VHI G
Sbjct: 239 L---RWRNQHPYLLADRMEDLTLPVDIEQNPKVGRKITLYGYLHGTNLPKHDASVHIPGV 295
Query: 295 GDFQLGKIEILKDPFP 310
GDF + L+DP P
Sbjct: 296 GDFVTSDVSSLEDPCP 311
Score = 45 (20.9 bits), Expect = 5.0e-21, Sum P(3) = 5.0e-21
Identities = 24/104 (23%), Positives = 39/104 (37%)
Query: 416 DQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGT-----ENDSVMMEGEILTRXXXXXXX 470
+ ED F G G N++ + D + F +D + DS + E L
Sbjct: 445 ENEDVDFTGKIGAINNEDESDNEEVAFADSDSDLGGQFDDEDSNLRWKEGLASKAALAYS 504
Query: 471 XXXXXXXXXXXXFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWD 514
F DE +P D +A+Y+G +S ++S D
Sbjct: 505 QSGKRRRNIQKIFYDESLSPKDA-----YAEYKG-ESAKSSESD 542
>DICTYBASE|DDB_G0287891 [details] [associations]
symbol:bms1l "BMS1-like ribosome biogenesis protein"
species:44689 "Dictyostelium discoideum" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 dictyBase:DDB_G0287891 GO:GO:0005525 GO:GO:0005739
GO:GO:0005730 GO:GO:0003924 GO:GO:0006184 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 eggNOG:COG5192 GO:GO:0006364 KO:K14569
OMA:ASYGFEM GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
RefSeq:XP_637074.1 ProteinModelPortal:Q54JS8 STRING:Q54JS8
EnsemblProtists:DDB0234115 GeneID:8626329 KEGG:ddi:DDB_G0287891
InParanoid:Q54JS8 ProtClustDB:CLSZ2846661 Uniprot:Q54JS8
Length = 1205
Score = 169 (64.5 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 76/337 (22%), Positives = 144/337 (42%)
Query: 7 QVNKSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAA-RVQRNKMLRDQKRLAL 65
+V+K+ ++ + K + L K + + +++ A A+ R+ + R+ KR+ L
Sbjct: 12 RVSKAG-AKANKKKAAKLKKLEQNEALKGRNPKAFISQAAYASNRLTIRNLDREAKRVNL 70
Query: 66 LKEKRASSGIASPPRVIVLFG---LSASVNLNSVREDLLRQLSSEGTGALSSTVSSSKYR 122
R+ + + +PP VI + G + + S+ ++ R S+ G + T+ + K R
Sbjct: 71 PVIDRSGTAVETPPYVIAVVGPPKCGKTTLIRSLIKNYTRHSISDVKGPI--TIVAGKKR 128
Query: 123 LRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRSLGL 182
R + ++ + DL ++ AKVADL + +++F + L+V ++ G
Sbjct: 129 -RLTFIEC-NNDLNSMIDTAKVADLVLLLIDASY------GFEMETF--EFLNVLKTHGF 178
Query: 183 PSTAVLIRDLP--TDLKKRKDLKKMCISSLTSEFPEDCK-FYAADT------KDELHKFL 233
P ++ L + KK K KK +E E K FY + K E+H
Sbjct: 179 PKVIGILTHLDGFKNNKKLKKTKKKFKDRFWTEIYEGAKLFYLSGIIHGKYPKVEIHNLA 238
Query: 234 WLFKEQRLTVPHWRNQRPFLMAQKV-DVVADDC--NSGKC--TLLLHGYLRAHCLSVNQL 288
WRN P++ + D + + K + L+GY+R L +
Sbjct: 239 RFISVANFIPLSWRNTHPYVYVDRFEDTTEPELVRQNPKIDRNICLYGYVRGTYLKPHMK 298
Query: 289 VHISGAGDFQLGKIEILKDPFPLNARKESDAMESDEI 325
VHI G+GD+ + + L DP PL ++ E + +
Sbjct: 299 VHIPGSGDYLMKSVTSLPDPCPLPTERKKTLNEKERL 335
Score = 167 (63.8 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 46/189 (24%), Positives = 90/189 (47%)
Query: 553 DSVPASLYVRLHIKEVPAGIAHRLCEMAE----RSPLIASGLLQHESKMSVLHFSVKKHD 608
+ P +YVR+ +++P CE +E + P++ GLL E + +++ S+KKH
Sbjct: 809 EGFPIGVYVRIEFEKIP-------CEFSEYFDPKFPVVVGGLLSSEENLGMINVSLKKHR 861
Query: 609 TYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFL--HAGCFSVASIYAPIC 666
+ +K+ + L+ VG+R+F ++S+ ++N +++M ++ H C AS Y P+
Sbjct: 862 WHKRILKSNDPLMISVGWRRFQTIVLYSTKDING-RNRMLKYTPEHMHCH--ASFYGPLT 918
Query: 667 FPPLPLI-VLKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMF 725
P I + ++ +D ++KK+ L G P ++ K V MF
Sbjct: 919 PPGTGFIGFTNANNNQAGFRVSATGTVLDLDSSINVVKKLKLIGQPDKIMKKTCFVNGMF 978
Query: 726 HNPEDVRWF 734
+ +V F
Sbjct: 979 TSRLEVAKF 987
Score = 46 (21.3 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 416 DQEDRGFPGYEGTNNSDIDDDQASLNFRYA----DDGTENDSVMMEGE 459
++ED G E D DDD ++N DD E D + + E
Sbjct: 478 EEEDDDEDGDEEDEEEDDDDDDENVNSSKVEFDDDDDLEEDEELSDEE 525
Score = 37 (18.1 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 424 GYEGTNNSDIDDDQASLNFRYADDGTENDS 453
G G NN++ +D+ +F + G + DS
Sbjct: 682 GLIGKNNAEGEDEVLFGDFEDLETGKKYDS 711
>UNIPROTKB|F1NH69 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:AADN02035303 EMBL:AADN02035304 IPI:IPI00604102
Ensembl:ENSGALT00000004133 Uniprot:F1NH69
Length = 1304
Score = 171 (65.3 bits), Expect = 4.7e-20, Sum P(3) = 4.7e-20
Identities = 55/230 (23%), Positives = 99/230 (43%)
Query: 516 KESLPPEYARIFA--FDKFTRTQKHVFANALKMEQENMDDSVPAS-------LYVRLHIK 566
KE EY A FD + + H A K E E+ DD +YVR+ I+
Sbjct: 853 KEMFDAEYDEGDATYFDDL-KEEMHKQAQLNKTEFEDQDDETRVQYEGFRPGMYVRIEIE 911
Query: 567 EVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGF 626
VP + P+I GL E + + +KKH Y +K ++ LI G+
Sbjct: 912 NVPCEF---VLNFDPHYPIILGGLGNSEGNVGYVQLRLKKHRWYKKILKTRDPLILSFGW 968
Query: 627 RQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLKSXXXXXXXXX 686
R+F P+F ++ N +H++ ++ A+ + PI + ++S
Sbjct: 969 RRFQTIPVFYIEDHNG-RHRLLKYTPQHMHCGATFWGPITPQGTGFLAVQSVSGTTPDFR 1027
Query: 687 XXXXSL-RSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFK 735
+ +D ++KK+ LTG+P ++ K + ++ MF++ +V F+
Sbjct: 1028 IAATGVVLDLDKSITVVKKLKLTGFPFKIFKNTSFIKGMFNSQLEVAKFE 1077
Score = 165 (63.1 bits), Expect = 4.7e-20, Sum P(3) = 4.7e-20
Identities = 82/343 (23%), Positives = 149/343 (43%)
Query: 10 KSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRN-KMLRDQKRLALLKE 68
K H+++ S + K D IG+ + + +A VQ +M R R LK
Sbjct: 9 KKHRAKHSGPKAEKKRKRHLNDLG-IGEEEDARKRNPQAFTVQSAVRMARTFHRTQDLKT 67
Query: 69 KRASSGIAS------PPRVIVLFG---LSASVNLNSVREDLLRQLSSEGTGALSSTVSSS 119
K+ + PP V+V+ G + S + + ++ RQ E G + T+ S
Sbjct: 68 KKHHIPVVDRTPLEPPPVVVVVVGPPKVGKSTLIKCLIKNFTRQKLVEIRGPV--TIVSG 125
Query: 120 KYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRS 179
K R R ++++ D+ +++AKVADL + +++F + L++ +
Sbjct: 126 KKR-RLTIIECGC-DVNTMIDLAKVADLVLMLIDAS------FGFEMETF--EFLNICQV 175
Query: 180 LGLPSTAVLIRDLPTDLKKRKDLKK----MCISSLTSEFPEDCKFYAADT------KDEL 229
G P ++ L T K K LKK + T +P FY + K E+
Sbjct: 176 HGFPKIMGILTHLDT-FKNNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQKQEI 234
Query: 230 H---KFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVA--DDCN-SGKCT--LLLHGYLRAH 281
H +F+ + K + LT W+ P+++A +++ + +D + KC + L+GYLR
Sbjct: 235 HNLGRFISVMKFRPLT---WQTSHPYVLADRMEDLTNPEDIRLNPKCDRKISLYGYLRGA 291
Query: 282 CLSVNQLVHISGAGDFQLGKIEILKDPFPLNARKESDAMESDE 324
L +H+ G GDF + + L DP L +++ ++ E
Sbjct: 292 YLKNKSQIHMPGVGDFTVSDVSFLPDPCALPEQQKKRSLSEKE 334
Score = 42 (19.8 bits), Expect = 4.7e-20, Sum P(3) = 4.7e-20
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 350 PDPLAGEQTWPTEAEMAEADQN 371
P P ++T P E E EA+ +
Sbjct: 636 PQPKKADRTRPVEPESIEAEDD 657
Score = 37 (18.1 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 366 AEADQNQKHRKQKKRAL 382
AE ++ +K R KKR L
Sbjct: 836 AEEEEAKKERLDKKRKL 852
>UNIPROTKB|E9PTV4 [details] [associations]
symbol:Bms1 "Protein Bms1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074774 IPI:IPI00358418
Ensembl:ENSRNOT00000008741 ArrayExpress:E9PTV4 Uniprot:E9PTV4
Length = 1282
Score = 173 (66.0 bits), Expect = 5.4e-20, Sum P(3) = 5.4e-20
Identities = 83/344 (24%), Positives = 148/344 (43%)
Query: 9 NKSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRN-KMLRDQKRLALLK 67
+K H+ + S + K +D ++G + + KA VQ +M R R LK
Sbjct: 6 HKKHRKKHSGPKAEKKKKRHLQDL-QLGDEEDARKRNPKAFAVQSAVRMARSFHRTQDLK 64
Query: 68 EKRASSGIAS------PPRVIVLFG---LSASVNLNSVREDLLRQLSSEGTGALSSTVSS 118
KR + PP V+V+ G + S + + + RQ SE G + T+ S
Sbjct: 65 TKRHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIRCLIRNFTRQKLSEIRGPV--TIVS 122
Query: 119 SKYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFR 178
K R R ++++ D+ +++AKVADL + +++F + L++ +
Sbjct: 123 GKKR-RLTIIECGC-DINVMIDLAKVADLVLMLIDAS------FGFEMETF--EFLNICQ 172
Query: 179 SLGLPSTAVLIRDLPTDLKKRKDLKK----MCISSLTSEFPEDCKFYAADT------KDE 228
G P ++ L + K K LKK + T +P FY + E
Sbjct: 173 VHGFPKIMGVLTHLDS-FKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQE 231
Query: 229 LH---KFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVA--DDCNSG-KCT--LLLHGYLRA 280
+H +F+ + K + LT W+ P+++A +++ + +D + KC + L+GYLR
Sbjct: 232 IHNLGRFITVMKFRPLT---WQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRG 288
Query: 281 HCLSVNQLVHISGAGDFQLGKIEILKDPFPLNARKESDAMESDE 324
L N +H+ G GDF + L DP L +++ + E
Sbjct: 289 AYLKTNSQIHMPGVGDFVASDVSFLPDPCALPEQQKKRCLNEKE 332
Score = 158 (60.7 bits), Expect = 5.4e-20, Sum P(3) = 5.4e-20
Identities = 57/249 (22%), Positives = 107/249 (42%)
Query: 497 KRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFT-RTQKHVFANALKMEQENMDDSV 555
K K R LK + +D ES Y FD Q+ N + E ++ + V
Sbjct: 826 KHLNKKRKLKELFDAEYDEGEST---Y-----FDDLKGEMQRQAQLNQAEFEDQDDETRV 877
Query: 556 P-----ASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTY 610
+YVR+ I+ +P P+I GL E + + +KKH Y
Sbjct: 878 QYEGFRPGMYVRIEIENIPCEFVQNF---DPHYPIILGGLGNSEGTVGYVQMRLKKHRWY 934
Query: 611 DAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKME---RFLHAGCFSVASIYAPICF 667
+K+++ +IF VG+R+F P++ ++ N + ++ + +H G A+ + PI
Sbjct: 935 KKILKSRDPVIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCG----ATFWGPITP 990
Query: 668 PPLPLIVLKSXXXXXXXXXXXXXSL-RSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFH 726
+ ++S + +D I+KK+ LTG+P ++ K + ++ MF+
Sbjct: 991 QGTGFLAIQSVSGAMPEFRIAATGVVLDLDKSIKIVKKLKLTGFPFKIFKNTSFIKGMFN 1050
Query: 727 NPEDVRWFK 735
+ +V F+
Sbjct: 1051 SALEVAKFE 1059
Score = 46 (21.3 bits), Expect = 5.4e-20, Sum P(3) = 5.4e-20
Identities = 26/84 (30%), Positives = 33/84 (39%)
Query: 297 FQLGKIEILKDPFPLNARKESDAMESDEIHDLEVIRTLSPDP-LKLEPLLVENVPDPLAG 355
F GK E KD L A E + + D DLE P L + +E +
Sbjct: 758 FVTGKWEDDKDAAKLLA--EDEELYGD-FEDLETGDVHKGKPGLDTQSEDIEEEEE--VK 812
Query: 356 EQTWPTEAEMAEADQNQKHRKQKK 379
E+T P E E A K RK K+
Sbjct: 813 EETGPAEEESAREKHLNKKRKLKE 836
Score = 40 (19.1 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 427 GTNNSDIDDDQASLNFRYADDGTENDS 453
G ++S+ D+D+ S DDG EN S
Sbjct: 443 GDDDSEGDEDEMS-----DDDGMENGS 464
>UNIPROTKB|Q14692 [details] [associations]
symbol:BMS1 "Ribosome biogenesis protein BMS1 homolog"
species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISS;IDA] [GO:0042255 "ribosome assembly" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000795
InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142 SMART:SM00785
GO:GO:0005525 GO:GO:0005524 GO:GO:0005730 GO:GO:0003924
GO:GO:0006184 eggNOG:COG5192 EMBL:D80009 EMBL:AL022344
EMBL:CH471160 EMBL:BC043345 EMBL:BC150252 IPI:IPI00006099
RefSeq:NP_055568.3 UniGene:Hs.10848 ProteinModelPortal:Q14692
SMR:Q14692 IntAct:Q14692 STRING:Q14692 PhosphoSite:Q14692
DMDM:27151474 PaxDb:Q14692 PeptideAtlas:Q14692 PRIDE:Q14692
Ensembl:ENST00000374518 GeneID:9790 KEGG:hsa:9790 UCSC:uc001jaj.3
CTD:9790 GeneCards:GC10P043277 H-InvDB:HIX0059462
H-InvDB:HIX0172328 H-InvDB:HIX0172329 HGNC:HGNC:23505 HPA:HPA036589
MIM:611448 neXtProt:NX_Q14692 PharmGKB:PA162377556
HOGENOM:HOG000166882 HOVERGEN:HBG023890 InParanoid:Q14692 KO:K14569
OMA:ASYGFEM OrthoDB:EOG4KWJS4 PhylomeDB:Q14692 ChiTaRS:BMS1
GenomeRNAi:9790 NextBio:36866 Bgee:Q14692 CleanEx:HS_BMS1
Genevestigator:Q14692 GermOnline:ENSG00000165733 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 Uniprot:Q14692
Length = 1282
Score = 173 (66.0 bits), Expect = 6.9e-20, Sum P(3) = 6.9e-20
Identities = 62/262 (23%), Positives = 115/262 (43%)
Query: 485 DEVDTPLDVPARKRFA-KYRGLKSFRTSSWDPKESLPPEYARIFAFDKFT-RTQKHVFAN 542
+E+D + A+K+ K R LK + +D ES Y FD QK N
Sbjct: 811 EEIDPDEEESAKKKHLDKKRKLKEMFDAEYDEGEST---Y-----FDDLKGEMQKQAQLN 862
Query: 543 ALKMEQENMDDSVP-----ASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKM 597
+ E ++ + V +YVR+ I+ VP P+I GL E +
Sbjct: 863 RAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQNF---DPHYPIILGGLGNSEGNV 919
Query: 598 SVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKME---RFLHAG 654
+ +KKH Y +K+++ +IF VG+R+F P++ ++ N + ++ + +H G
Sbjct: 920 GYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCG 979
Query: 655 CFSVASIYAPICFPPLPLIVLKSXXXXXXXXXXXXXSL-RSIDPDRIILKKIVLTGYPQR 713
A+ + PI + ++S + +D I+KK+ LTG+P +
Sbjct: 980 ----AAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKSIKIVKKLKLTGFPYK 1035
Query: 714 VSKLKAIVRYMFHNPEDVRWFK 735
+ K + ++ MF++ +V F+
Sbjct: 1036 IFKNTSFIKGMFNSALEVAKFE 1057
Score = 160 (61.4 bits), Expect = 6.9e-20, Sum P(3) = 6.9e-20
Identities = 83/344 (24%), Positives = 151/344 (43%)
Query: 10 KSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRN-KMLRDQKRLALLKE 68
K H+ + S + K +D ++G + + KA VQ +M R R LK
Sbjct: 7 KKHRKKNSGPKAAKKKKRLLQDL-QLGDEEDARKRNPKAFAVQSAVRMARSFHRTQDLKT 65
Query: 69 KRASSGIAS------PPRVIVLFG---LSASVNLNSVREDLLRQLSSEGTGALSSTVSSS 119
K+ + PP V+V+ G + S + + + RQ +E G + T+ S
Sbjct: 66 KKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPV--TIVSG 123
Query: 120 KYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRS 179
K R R ++++ D+ +++AKVADL + +++F + L++ +
Sbjct: 124 KKR-RLTIIECGC-DINMMIDLAKVADLVLMLIDAS------FGFEMETF--EFLNICQV 173
Query: 180 LGLPSTAVLIRDLPTDLKKRKDLKK----MCISSLTSEFPEDCKFYAADT------KDEL 229
G P ++ L + K K LKK + T +P FY + E+
Sbjct: 174 HGFPKIMGVLTHLDS-FKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEI 232
Query: 230 H---KFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVA--DDCNSG-KCT--LLLHGYLR-A 280
H +F+ + K + LT W+ P+++A +++ + +D + KC + L+GYLR A
Sbjct: 233 HNLGRFITVMKFRPLT---WQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGA 289
Query: 281 HCLSVNQLVHISGAGDFQLGKIEILKDPFPLNARKESDAMESDE 324
H + +Q +H+ G GDF + I L DP L +++ + E
Sbjct: 290 HLKNKSQ-IHMPGVGDFAVSDISFLPDPCALPEQQKKRCLNEKE 332
Score = 43 (20.2 bits), Expect = 6.9e-20, Sum P(3) = 6.9e-20
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 426 EGTNNSDIDDDQASLNFRYADDGTENDSVMMEGE 459
E ++ D +DD+ S DDG EN S E E
Sbjct: 438 ESGDSDDEEDDEMS-----EDDGLENGSSDEEAE 466
>CGD|CAL0002359 [details] [associations]
symbol:BMS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0034511 "U3 snoRNA binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR012948 Pfam:PF00004 Pfam:PF08142
SMART:SM00382 SMART:SM00785 CGD:CAL0002359 GO:GO:0005524
GO:GO:0005634 GO:GO:0042254 GO:GO:0035690 GO:GO:0017111
eggNOG:COG5192 EMBL:AACQ01000041 EMBL:AACQ01000040 KO:K14569
InterPro:IPR007034 Pfam:PF04950 RefSeq:XP_718522.1
RefSeq:XP_718605.1 ProteinModelPortal:Q5A9Y0 STRING:Q5A9Y0
GeneID:3639801 GeneID:3639857 KEGG:cal:CaO19.10040
KEGG:cal:CaO19.2504 Uniprot:Q5A9Y0
Length = 1210
Score = 184 (69.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 52/215 (24%), Positives = 105/215 (48%)
Query: 536 QKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRL------CEMAERS----PL 585
QK+ A L++ + ++ P +R+ I+ AG ++ CE + PL
Sbjct: 780 QKNKMAKQLEINKVQYEEMTPE---MRIKIEGYRAGSYVKIVFDNIPCEFIDNFDPAYPL 836
Query: 586 IASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKH 645
+ GLL ES+ +++ +++H + +K+++ LI +G+R+F PI+++ + + ++
Sbjct: 837 VLGGLLTTESRFGIMNARIRRHRWHKKILKSQDPLILSLGWRRFQTLPIYTTSDSRT-RN 895
Query: 646 KMERFL--HAGCFSVASIYAPICFPPLPLI---VLKSXXXXXXXXXXXXXSLRSIDPDRI 700
+M ++ HA CF AS Y P+ P + ++ S + I+
Sbjct: 896 RMLKYTPEHAYCF--ASFYGPLVAPNTTFVGFNIVDSKSTTGAFRVAASGIIEDINSSVE 953
Query: 701 ILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFK 735
I+KK+ L GYP ++ + A ++ MF N +V F+
Sbjct: 954 IVKKLKLVGYPYKIFRNTAFIKDMFSNSLEVAKFE 988
Score = 139 (54.0 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 78/325 (24%), Positives = 139/325 (42%)
Query: 7 QVNKSHKSRFSTK---SSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQKRL 63
Q NK+H+ TK + + LH+ K+ V+ K R+ R ++K+L
Sbjct: 6 QSNKAHRG--GTKKPGAKKKLHQDGQNKKAFA------VSAPRKLERMARRSHDVNEKKL 57
Query: 64 ALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSS--TVSSSKY 121
+ R PP +I + G +++ + L+R+L+ ++ TV S K
Sbjct: 58 HVPMVDRTPDD-DPPPVIIAVVG-PPGTGKSTLIKSLIRRLTKTTLTEINGPITVVSGKR 115
Query: 122 RLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRSLG 181
R R + ++ + DL +++AKVADL +++ + + R LG
Sbjct: 116 R-RLTFIEV-NNDLNSMIDIAKVADLVLLLIDGNYGLEMETMEFLNIAQHHGMP--RVLG 171
Query: 182 LPSTAVLIRDLPTDLKKRKDLKKMCISSLTSEFPEDCK-FYAADTKD---------ELHK 231
+ + L + T +K LK +E + K FY + + L +
Sbjct: 172 VATHLDLFKSQSTLRTSKKRLKHR----FWTEVYQGAKLFYLSGVINGRYPDREILNLSR 227
Query: 232 FLWLFKEQRLTVPHWRNQRPFLMAQKV-DVVADD--CNSGKCT--LLLHGYLRAHCLSV- 285
F+ + K + L WRN+ P+L+A ++ D+ + KC + ++GYL L V
Sbjct: 228 FISVMKFRPLK---WRNEHPYLLADRITDLTHPQKIAENSKCDRKVAIYGYLHGTPLPVE 284
Query: 286 NQLVHISGAGDFQLGKIEILKDPFP 310
N +HI+G GD + +E L DP P
Sbjct: 285 NAHIHIAGVGDHYVHSVEKLPDPCP 309
Score = 43 (20.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 192 LPTDLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDE 228
+ T+ K++ + K + E ED +F A+D +DE
Sbjct: 736 MTTEEKRQLNAAKKAKLKMQFEEEEDREFGASDPEDE 772
>UNIPROTKB|Q5A9Y0 [details] [associations]
symbol:BMS1 "Putative uncharacterized protein BMS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR012948 Pfam:PF00004 Pfam:PF08142
SMART:SM00382 SMART:SM00785 CGD:CAL0002359 GO:GO:0005524
GO:GO:0005634 GO:GO:0042254 GO:GO:0035690 GO:GO:0017111
eggNOG:COG5192 EMBL:AACQ01000041 EMBL:AACQ01000040 KO:K14569
InterPro:IPR007034 Pfam:PF04950 RefSeq:XP_718522.1
RefSeq:XP_718605.1 ProteinModelPortal:Q5A9Y0 STRING:Q5A9Y0
GeneID:3639801 GeneID:3639857 KEGG:cal:CaO19.10040
KEGG:cal:CaO19.2504 Uniprot:Q5A9Y0
Length = 1210
Score = 184 (69.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 52/215 (24%), Positives = 105/215 (48%)
Query: 536 QKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRL------CEMAERS----PL 585
QK+ A L++ + ++ P +R+ I+ AG ++ CE + PL
Sbjct: 780 QKNKMAKQLEINKVQYEEMTPE---MRIKIEGYRAGSYVKIVFDNIPCEFIDNFDPAYPL 836
Query: 586 IASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKH 645
+ GLL ES+ +++ +++H + +K+++ LI +G+R+F PI+++ + + ++
Sbjct: 837 VLGGLLTTESRFGIMNARIRRHRWHKKILKSQDPLILSLGWRRFQTLPIYTTSDSRT-RN 895
Query: 646 KMERFL--HAGCFSVASIYAPICFPPLPLI---VLKSXXXXXXXXXXXXXSLRSIDPDRI 700
+M ++ HA CF AS Y P+ P + ++ S + I+
Sbjct: 896 RMLKYTPEHAYCF--ASFYGPLVAPNTTFVGFNIVDSKSTTGAFRVAASGIIEDINSSVE 953
Query: 701 ILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFK 735
I+KK+ L GYP ++ + A ++ MF N +V F+
Sbjct: 954 IVKKLKLVGYPYKIFRNTAFIKDMFSNSLEVAKFE 988
Score = 139 (54.0 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 78/325 (24%), Positives = 139/325 (42%)
Query: 7 QVNKSHKSRFSTK---SSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQKRL 63
Q NK+H+ TK + + LH+ K+ V+ K R+ R ++K+L
Sbjct: 6 QSNKAHRG--GTKKPGAKKKLHQDGQNKKAFA------VSAPRKLERMARRSHDVNEKKL 57
Query: 64 ALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSS--TVSSSKY 121
+ R PP +I + G +++ + L+R+L+ ++ TV S K
Sbjct: 58 HVPMVDRTPDD-DPPPVIIAVVG-PPGTGKSTLIKSLIRRLTKTTLTEINGPITVVSGKR 115
Query: 122 RLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRSLG 181
R R + ++ + DL +++AKVADL +++ + + R LG
Sbjct: 116 R-RLTFIEV-NNDLNSMIDIAKVADLVLLLIDGNYGLEMETMEFLNIAQHHGMP--RVLG 171
Query: 182 LPSTAVLIRDLPTDLKKRKDLKKMCISSLTSEFPEDCK-FYAADTKD---------ELHK 231
+ + L + T +K LK +E + K FY + + L +
Sbjct: 172 VATHLDLFKSQSTLRTSKKRLKHR----FWTEVYQGAKLFYLSGVINGRYPDREILNLSR 227
Query: 232 FLWLFKEQRLTVPHWRNQRPFLMAQKV-DVVADD--CNSGKCT--LLLHGYLRAHCLSV- 285
F+ + K + L WRN+ P+L+A ++ D+ + KC + ++GYL L V
Sbjct: 228 FISVMKFRPLK---WRNEHPYLLADRITDLTHPQKIAENSKCDRKVAIYGYLHGTPLPVE 284
Query: 286 NQLVHISGAGDFQLGKIEILKDPFP 310
N +HI+G GD + +E L DP P
Sbjct: 285 NAHIHIAGVGDHYVHSVEKLPDPCP 309
Score = 43 (20.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 192 LPTDLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDE 228
+ T+ K++ + K + E ED +F A+D +DE
Sbjct: 736 MTTEEKRQLNAAKKAKLKMQFEEEEDREFGASDPEDE 772
>SGD|S000006138 [details] [associations]
symbol:BMS1 "GTPase required for ribosomal subunit synthesis
and rRNA processing" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0034511 "U3 snoRNA binding" evidence=IDA] [GO:0042255 "ribosome
assembly" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IEA;IDA;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;IDA;IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0030686 "90S preribosome" evidence=IDA]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 SGD:S000006138 GO:GO:0005525 GO:GO:0005739
GO:GO:0005524 GO:GO:0005730 GO:GO:0003924 EMBL:BK006949
eggNOG:COG5192 GO:GO:0030686 GO:GO:0006364 HOGENOM:HOG000166882
KO:K14569 OMA:ASYGFEM GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
OrthoDB:EOG4GTPN1 EMBL:Z73573 PIR:S65236 RefSeq:NP_015107.1
ProteinModelPortal:Q08965 SMR:Q08965 DIP:DIP-6562N IntAct:Q08965
MINT:MINT-647500 STRING:Q08965 PaxDb:Q08965 PeptideAtlas:Q08965
PRIDE:Q08965 EnsemblFungi:YPL217C GeneID:855884 KEGG:sce:YPL217C
CYGD:YPL217c GeneTree:ENSGT00550000074774 NextBio:980544
Genevestigator:Q08965 GermOnline:YPL217C GO:GO:0034511
Uniprot:Q08965
Length = 1183
Score = 174 (66.3 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 43/192 (22%), Positives = 89/192 (46%)
Query: 547 EQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKK 606
EQ + A YVR+ ++VP + P++ GLL E K ++ +++
Sbjct: 775 EQRQRIEGFKAGSYVRIVFEKVPMEFVKNF---NPKFPIVMGGLLPTEIKFGIVKARLRR 831
Query: 607 HDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASIYAPIC 666
H + +K + L+ +G+R+F PI+++ + + + +M ++ + A+ Y P+C
Sbjct: 832 HRWHKKILKTNDPLVLSLGWRRFQTLPIYTTTDSRT-RTRMLKYTPEHTYCNAAFYGPLC 890
Query: 667 FPPLPLI---VLKSXXXXXXXXXXXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVRY 723
P P ++ + + ID + I+KK+ L G+P ++ K A ++
Sbjct: 891 SPNTPFCGVQIVANSDTGNGFRIAATGIVEEIDVNIEIVKKLKLVGFPYKIFKNTAFIKD 950
Query: 724 MFHNPEDVRWFK 735
MF + +V F+
Sbjct: 951 MFSSAMEVARFE 962
Score = 149 (57.5 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 75/325 (23%), Positives = 137/325 (42%)
Query: 7 QVNKSH-KSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQKRLAL 65
Q NK H K++ + + LH + K+ A G A +QR+ + ++K
Sbjct: 3 QSNKQHRKAKEKNTAKKKLHT-----QGHNAKAFAVAAPGKMARTMQRSSDVNERKLHVP 57
Query: 66 LKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSS--TVSSSKYRL 123
+ ++ PP ++ + G + +R L+R+++ + TV S K+R
Sbjct: 58 MVDRTPEDD--PPPFIVAVVGPPGTGKTTLIRS-LVRRMTKSTLNDIQGPITVVSGKHR- 113
Query: 124 RTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRSLGLP 183
R + L+ P DL +++AK+ADL +++ + + R LG+
Sbjct: 114 RLTFLECPADDLNAMIDIAKIADLVLLLIDGNFGFEMETMEFLNIAQHHGMP--RVLGVA 171
Query: 184 STAVLIRDLPTDLKKRKDLKKMCISSLTSEFPEDCK-FYAADTKD---------ELHKFL 233
+ L + T +K LK +E + K FY + + L +F+
Sbjct: 172 THLDLFKSQSTLRASKKRLKHR----FWTEVYQGAKLFYLSGVINGRYPDREILNLSRFI 227
Query: 234 WLFKEQRLTVPHWRNQRPFLMAQK-VDVVADDC--NSG---KCTLLLHGYLRAHCL--SV 285
+ K + L WRN+ P+++A + D+ + G + ++GYL L +
Sbjct: 228 SVMKFRPLK---WRNEHPYMLADRFTDLTHPELIETQGLQIDRKVAIYGYLHGTPLPSAP 284
Query: 286 NQLVHISGAGDFQLGKIEILKDPFP 310
VHI+G GDF + +IE L DP P
Sbjct: 285 GTRVHIAGVGDFSVAQIEKLPDPCP 309
Score = 37 (18.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 352 PLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQA 391
P A ++ P ++++ + +K KRA+ G E +A
Sbjct: 1070 PKAVQKELPFKSQIHQMKPQKKKTYMAKRAVVLGGDEKKA 1109
>ASPGD|ASPL0000005995 [details] [associations]
symbol:AN6334 species:162425 "Emericella nidulans"
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR000795
InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142 SMART:SM00785
GO:GO:0005525 GO:GO:0005739 GO:GO:0005634 GO:GO:0003924
GO:GO:0006184 GO:GO:0042254 EMBL:AACD01000107 EMBL:BN001301
eggNOG:COG5192 GO:GO:0030686 HOGENOM:HOG000166882 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950 OrthoDB:EOG4GTPN1
GO:GO:0034511 RefSeq:XP_663938.1 ProteinModelPortal:Q5AZE6
STRING:Q5AZE6 EnsemblFungi:CADANIAT00006652 GeneID:2871229
KEGG:ani:AN6334.2 Uniprot:Q5AZE6
Length = 1179
Score = 168 (64.2 bits), Expect = 4.6e-19, Sum P(3) = 4.6e-19
Identities = 44/182 (24%), Positives = 87/182 (47%)
Query: 557 ASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKA 616
A Y R+ ++ VP + + R P+I GL E + + +K+H + +K+
Sbjct: 779 AGTYARIVLERVPCEFSTKF---NPRYPVIVGGLAPTEDRFGYVQVRIKRHRWHKKILKS 835
Query: 617 KEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFL--HAGCFSVASIYAPICFPPLPLIV 674
+ LIF +G+R+F P++S+ + N +++M ++ H CF + Y P+ P
Sbjct: 836 NDPLIFSLGWRRFQTLPMYSTSD-NRTRNRMLKYTPEHMHCFG--TFYGPLVAPNTGFCC 892
Query: 675 LKSXXXXXXXXXXXXXSL-RSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRW 733
++S + S+D I+KK+ LTG ++ K A ++ MF++ ++
Sbjct: 893 VQSFSNKNPGFRIAATGVVLSVDEHTEIVKKLKLTGVAYKIFKNTAFIKDMFNSSLEIAK 952
Query: 734 FK 735
F+
Sbjct: 953 FE 954
Score = 162 (62.1 bits), Expect = 4.6e-19, Sum P(3) = 4.6e-19
Identities = 80/293 (27%), Positives = 131/293 (44%)
Query: 41 NVAKGAKAARVQRNKMLRDQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDL 100
N KG KA R+ +++ KRL + R +PP V+ + G V ++ + L
Sbjct: 30 NPGKGNKAGA--RSHDIKE-KRLHVPLVDRLPE--EAPPLVVAVVG-PPGVGKTTLIKSL 83
Query: 101 LRQLSSEGTGALSS--TVSSSKYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXX 158
+R+ + + + TV +SK R R ++L+ P L +++AK+AD+
Sbjct: 84 IRRYTKQTLSTPNGPLTVVTSKKR-RLTILECPSDSLAAMIDVAKIADIVLLMIDG---- 138
Query: 159 XXXMSYYIDSFGNQCLSVFRSLGLPSTAV-LIRDLPTDL-KKRKDL---KKMCISSLTSE 213
+Y + + L+V + G+P ++ L DL KK+ L KK SE
Sbjct: 139 ----NYGFEMETMEFLNVLSTSGMPGNVFGILTHL--DLFKKQSTLRAAKKRLKHRFWSE 192
Query: 214 FPEDCK-FYAADTKD------ELH---KFLWLFKEQRLTVPHWRNQRPFLMAQK-VDVV- 261
K FY + + E+H +FL + K R V WRN P+ +A + +D+
Sbjct: 193 LYNGAKLFYLSGVINGRYPDREVHNLSRFLSVMKNPRPLV--WRNSHPYALADRFLDITP 250
Query: 262 -ADDCNSGKC--TLLLHGYLRA-HCLSVNQLVHISGAGDFQLGKIEILKDPFP 310
+ KC T+ L+GYLR + + VH+ G GD + IE L DP P
Sbjct: 251 PTEIEKDPKCDRTIALYGYLRGTNFPAQGARVHVPGVGDLTVSGIEALPDPCP 303
Score = 37 (18.1 bits), Expect = 4.6e-19, Sum P(3) = 4.6e-19
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 361 TEAEMAEADQNQKHRKQKKRA 381
T+A+ + D +KHR++ + A
Sbjct: 401 TKADDEDNDTGRKHRREVRFA 421
Score = 37 (18.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 302 IEILKDPFPLNARKESDAMESDEIHDLEVIRTLSPDP 338
+ ++K+P PL R +D D+ + DP
Sbjct: 222 LSVMKNPRPLVWRNSHPYALADRFLDITPPTEIEKDP 258
>UNIPROTKB|E1BPP2 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:DAAA02061559 EMBL:DAAA02061560 IPI:IPI00838890
Ensembl:ENSBTAT00000048816 Uniprot:E1BPP2
Length = 1290
Score = 174 (66.3 bits), Expect = 4.6e-19, Sum P(3) = 4.6e-19
Identities = 62/262 (23%), Positives = 115/262 (43%)
Query: 485 DEVDTPLDVPARKRFA-KYRGLKSFRTSSWDPKESLPPEYARIFAFDKFT-RTQKHVFAN 542
+E+D + A+K+ K R LK + +D ES Y FD QK N
Sbjct: 819 EEIDPSAEESAKKKHLDKKRKLKEMFDAEYDEGEST---Y-----FDDLKGEMQKQAQLN 870
Query: 543 ALKMEQENMDDSVP-----ASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKM 597
+ E + + V +YVR+ I+ VP + P+I GL E +
Sbjct: 871 RAEFEDQEDEARVQYEGFRPGMYVRIEIENVPCEF---VLNFDPHYPIILGGLGNSEGNV 927
Query: 598 SVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKME---RFLHAG 654
+ +KKH Y +K+++ +IF VG+R+F P++ ++ N + ++ + +H G
Sbjct: 928 GYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCG 987
Query: 655 CFSVASIYAPICFPPLPLIVLKSXXXXXXXXXXXXXSL-RSIDPDRIILKKIVLTGYPQR 713
A+ + PI + ++S + +D I+KK+ LTG+P +
Sbjct: 988 ----ATFWGPITPQGTGFLAVQSVSGSMPDFRIAATGVVLDLDKSIKIVKKLKLTGFPYK 1043
Query: 714 VSKLKAIVRYMFHNPEDVRWFK 735
+ K + ++ MF++ +V F+
Sbjct: 1044 IFKNTSFIKGMFNSALEVAKFE 1065
Score = 154 (59.3 bits), Expect = 4.6e-19, Sum P(3) = 4.6e-19
Identities = 82/343 (23%), Positives = 147/343 (42%)
Query: 10 KSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQKRLALLKEK 69
K+ + K R+L D+ K + A R+ R+ R R LK K
Sbjct: 12 KNSGPKAEKKKKRHLQDLQLGDEEDARKRNPKAFAVQSAVRMARS-FHRKTNRTQDLKTK 70
Query: 70 RASSGIAS------PPRVIVLFG---LSASVNLNSVREDLLRQLSSEGTGALSSTVSSSK 120
+ + PP V+V+ G + S + + + RQ +E G + T+ S K
Sbjct: 71 KHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPV--TIVSGK 128
Query: 121 YRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRSL 180
R R ++++ D+ +++AKVADL + +++F + L++ +
Sbjct: 129 KR-RLTIIECGC-DINMMIDLAKVADLVLMLIDAS------FGFEMETF--EFLNICQVH 178
Query: 181 GLPSTAVLIRDLPTDLKKRKDLKK----MCISSLTSEFPEDCKFYAADT------KDELH 230
G P ++ L + K K LKK + T +P FY + E+H
Sbjct: 179 GFPKIMGVLTHLDS-FKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIH 237
Query: 231 ---KFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVA--DDCNSG-KCT--LLLHGYLR-AH 281
+F+ + K + LT W+ P+++A +++ + +D + KC + L+GYLR AH
Sbjct: 238 NLGRFITVMKFRPLT---WQTSHPYILADRMEDLTNPEDIRTNTKCDRKVSLYGYLRGAH 294
Query: 282 CLSVNQLVHISGAGDFQLGKIEILKDPFPLNARKESDAMESDE 324
+ +Q VHI G GDF + + L DP L +++ + E
Sbjct: 295 LKNKSQ-VHIPGVGDFAVSDVSFLPDPCALPEQQKKRCLNEKE 336
Score = 40 (19.1 bits), Expect = 4.6e-19, Sum P(3) = 4.6e-19
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 428 TNNSDIDDDQAS----LNFRYADDGTE 450
+ SD +DD+ S L Y+DD TE
Sbjct: 447 SGESDDEDDEMSDGDRLENSYSDDETE 473
>WB|WBGene00022021 [details] [associations]
symbol:Y61A9LA.10 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 GO:GO:0005525 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254
eggNOG:COG5192 HOGENOM:HOG000166882 KO:K14569 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:FO081464 RefSeq:NP_504245.3 ProteinModelPortal:Q9N306
SMR:Q9N306 STRING:Q9N306 PaxDb:Q9N306 EnsemblMetazoa:Y61A9LA.10
GeneID:178851 KEGG:cel:CELE_Y61A9LA.10 UCSC:Y61A9LA.10 CTD:178851
WormBase:Y61A9LA.10 InParanoid:Q9N306 NextBio:902832 Uniprot:Q9N306
Length = 1055
Score = 182 (69.1 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 52/202 (25%), Positives = 94/202 (46%)
Query: 537 KHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESK 596
+ VF + E+E ++ + YVR+ I VP A P I GLL E
Sbjct: 637 RQVFEGMDEEEREKVE-GFRSGRYVRIEISSVPCEFVDHFDTSA---PYIIGGLLPGEQN 692
Query: 597 MSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFL--HAG 654
M V+ VK+H ++ +K+++ LI G+R+F I+S + N + + ++ H
Sbjct: 693 MGVVQARVKRHRWFERTLKSRDPLIISCGWRRFQTIAIYSVQDHNM-RLRFLKYTPEHMH 751
Query: 655 CFSVASIYAPICFPPLPLIVLKSXXXXX-XXXXXXXXSLRSIDPDRIILKKIVLTGYPQR 713
C AS + P+C L+ ++S + +D ++KK+ L G+P++
Sbjct: 752 CH--ASFFGPVCAQNTGLLAIQSIADKTPGYRIVATGGVLDLDKSTQVVKKLKLIGHPEK 809
Query: 714 VSKLKAIVRYMFHNPEDVRWFK 735
+ K A V+ MF++ +V F+
Sbjct: 810 IFKKTAFVKGMFNSALEVAKFE 831
Score = 135 (52.6 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 65/328 (19%), Positives = 136/328 (41%)
Query: 23 NLHKTAAKDKSRIGKSDCNVAKGAKA----ARVQRNKMLR------DQKRLALLKEKRAS 72
N+HKT K K R K KA + V K +R ++K+ L+ +++
Sbjct: 16 NVHKTGGKAKKRNEKEPRVKGNNLKAFTFHSAVSAGKAIRRAADLNEKKKHVLMMDRKP- 74
Query: 73 SGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSS--TVSSSKYRLRTSVLQA 130
I +PP ++ + G S V ++ L++ +G G ++ T+ + K R R ++
Sbjct: 75 --IETPPIIVAIVGPS-KVGKTTLLRGLVKYYLRDGFGEINGPVTIVTGKKR-RVQFIEV 130
Query: 131 PHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRSLGLPSTAVLIR 190
+ D+ +++AKVADL + +++F + L++ + G+P ++
Sbjct: 131 KN-DINHMIDIAKVADLVLLMVDASY------GFEMETF--EFLNICQVHGMPRIMGVLN 181
Query: 191 --DLPTDLKKRKDLKKMCISSLTSEFPEDCK-FYAADTK------DELHKFLWLFKEQRL 241
DL + + KK+ +E + K FY +E+H +
Sbjct: 182 HLDLLDGISRVNKTKKILKHRFWTELYQGAKLFYMTGMMHGQYKYNEIHNLCRFISVMKF 241
Query: 242 TVPHWRNQRPFLMAQKVDVVADDCNSGKCTLL-----LHGYLRAHCLSVNQLVHISGAGD 296
W++ P+++ + + + + L+ ++G++ L + +H+ G GD
Sbjct: 242 RPMVWKDAHPYVLCDRFEDITNVETLRTDPLIDRHIAMYGWVHGAHLKNHSSIHVPGVGD 301
Query: 297 FQLGKIEILKDPFPLNARKESDAMESDE 324
++ + L DP PL + A+ E
Sbjct: 302 MRISNVTSLPDPCPLPDEIKKRALNEKE 329
Score = 43 (20.2 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 325 IHDLEVIRTLSPDPLKLEPL--LVENVPDPLAGEQTWPTEAEMAEADQNQK 373
+ LE +++ D LK L L ++V + E WP E E D +++
Sbjct: 367 VEALEGVKSGIDDKLKKSSLQLLGDSVALDIDQESDWPEPGEEDEEDLDEE 417
Score = 42 (19.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 197 KKRKDLKKMCISSLTSEFPEDCKFYAADTKDEL 229
+KR + K ++ E CKFY K+E+
Sbjct: 598 QKRLEAKIKLKQRFNDDYDETCKFYNK-AKNEM 629
Score = 37 (18.1 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 323 DEIHDLEVIRTLSPDPL 339
D D+ + TL DPL
Sbjct: 256 DRFEDITNVETLRTDPL 272
>ZFIN|ZDB-GENE-060720-2 [details] [associations]
symbol:bms1l "BMS1-like, ribosome assembly protein
(yeast)" species:7955 "Danio rerio" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 ZFIN:ZDB-GENE-060720-2 GO:GO:0005525
GO:GO:0005634 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:BX248124 IPI:IPI00919984 RefSeq:NP_001104620.2
UniGene:Dr.76844 Ensembl:ENSDART00000053761
Ensembl:ENSDART00000130032 GeneID:553241 KEGG:dre:553241 CTD:553241
NextBio:20880021 Uniprot:E7F349
Length = 1221
Score = 155 (59.6 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 59/253 (23%), Positives = 107/253 (42%)
Query: 492 DVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRT-QKHVFANALKMEQEN 550
+V KR K R LK + +D ++ Y FD QK N + E E+
Sbjct: 759 EVQKNKRLEKKRRLKERFDAQYDDGDAT---Y-----FDDLKEEMQKQAELN--RQEFED 808
Query: 551 MDDSVPAS-------LYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHFS 603
+DD + +YVR+ I VP + P I GL E + L
Sbjct: 809 VDDEIRVQYEGFRPGMYVRVEIPAVPCEF---VTNFDPHYPTILGGLGASEGNVGYLQMR 865
Query: 604 VKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASIYA 663
+KKH ++ +K ++ LI +G+R+F P++ ++ N +H++ ++ A+I+
Sbjct: 866 LKKHRWHNRILKTRDPLILSLGWRRFQTIPLYYIEDHNG-RHRLLKYTPEHMHCGATIWG 924
Query: 664 PICFPPLPLIVLKSXXXXXXXXXXXXXSL-RSIDPDRIILKKIVLTGYPQRVSKLKAIVR 722
PI + +++ + +D I+KK+ L GYP ++ K ++
Sbjct: 925 PITPQGTGFLAVQTIGGVKANFRIAATGVVLDLDKSVSIVKKLKLIGYPYKIFKNTCFIQ 984
Query: 723 YMFHNPEDVRWFK 735
MF+ +V F+
Sbjct: 985 GMFNTILEVAKFE 997
Score = 141 (54.7 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 66/256 (25%), Positives = 117/256 (45%)
Query: 78 PPRVIVLFG---LSASVNLNSVREDLLRQLSSEGTGALSSTVSSSKYRLRTSVLQAPHGD 134
PP VIV+ G + S + + ++ RQ S+ G + T+ S K R R + ++ + D
Sbjct: 82 PPVVIVVMGPPKVGKSTLIRCLIKNFTRQKLSDICGPV--TIVSGKKR-RLTFIEC-NND 137
Query: 135 LVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRSLGLPSTAVLIRDLPT 194
+ +++AKVADL + +++F + L++ + G P ++ L +
Sbjct: 138 INSMIDLAKVADLVLMLIDAS------FGFEMETF--EFLNICQVHGFPRIMGVLTHLDS 189
Query: 195 DLKKRKDL---KKMCISSLTSEFPEDCK-FYAA----------DTKDELHKFLWLFKEQR 240
K K L KK +E + K FY + + K+ L +F+ + K +
Sbjct: 190 -FKNNKTLRKTKKRLKDRFWTEVFQGAKLFYLSGMVYGEYQIQEVKN-LGRFISVMKFRP 247
Query: 241 LTVPHWRNQRPFLMAQKVDVVADDCN---SGKC--TLLLHGYLRAHCLSVNQLVHISGAG 295
L W+ P+++A +++ + D + KC T+ L+GYLR + VHI G G
Sbjct: 248 LV---WQTSHPYVLADRMEDLTDPEAIRLNPKCDRTVSLYGYLRGTFMKNKSQVHIPGVG 304
Query: 296 DFQLGKIEILKDPFPL 311
DF + + L DP PL
Sbjct: 305 DFTVSDVGFLPDPCPL 320
Score = 37 (18.1 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 446 DDGTENDSVMMEGE 459
DD E+DS M E E
Sbjct: 555 DDDEEDDSDMQEDE 568
Score = 37 (18.1 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 426 EGTNNSDIDDDQASLNFRYADDGTENDSVMMEGE 459
EG ++ D DDD + +D E + EGE
Sbjct: 439 EGEDDGDEDDDDDDDDEEEVEDEDEENE---EGE 469
>FB|FBgn0036686 [details] [associations]
symbol:CG7728 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0005634
EMBL:AE014296 GO:GO:0022008 GO:GO:0042254 eggNOG:COG5192 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950
GeneTree:ENSGT00550000074774 EMBL:AY061447 RefSeq:NP_648945.1
UniGene:Dm.3597 SMR:Q9VVC9 STRING:Q9VVC9 EnsemblMetazoa:FBtr0075274
GeneID:39904 KEGG:dme:Dmel_CG7728 UCSC:CG7728-RA
FlyBase:FBgn0036686 InParanoid:Q9VVC9 OrthoDB:EOG4ZGMT9
GenomeRNAi:39904 NextBio:816019 Uniprot:Q9VVC9
Length = 1159
Score = 143 (55.4 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 73/334 (21%), Positives = 150/334 (44%)
Query: 10 KSHKSRFSTKSSRNLHKTAAKDKSRIGKSDC-NVAKGAKAARVQRNKMLRDQKRLALLKE 68
K+ K + K N + + R K+ N A+ A+ +R + L +K+ + +
Sbjct: 21 KADKKKLKAKKDSNQKEPELTARQRNPKAFAINSAQRAER-NFRRKEDLTAKKQHIPVVD 79
Query: 69 KRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSS--TVSSSKYRLRTS 126
+ + PP +I + G V ++ +DL++ + + T+ +SK R R +
Sbjct: 80 QTPN---VPPPVLIAVVG-PPKVGKTTLIKDLIKSFTRTNVTDIKGPITIVTSKKR-RIT 134
Query: 127 VLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRSLGLPSTA 186
+L+ + D+ +++AK ADL + +++ Q + + +G+ +
Sbjct: 135 LLEC-NNDVNSMIDVAKCADLVLLLCDASYGFEMEIFEFLNIC--QVHGMPKIMGVLTHL 191
Query: 187 VLIRDLPTDLKKRKDLKKMCISSLTSEFPEDCKFYAADT------KDE---LHKFLWLFK 237
+I++ P L+KRK K++ T + FY + ++E L +F+ + K
Sbjct: 192 DMIKN-PKQLRKRK--KELKHRFWTEVYDGAKLFYLSGLLHGEYLRNEVKNLGRFISVMK 248
Query: 238 EQRLTVPHWRNQRPFLMAQKV-DVVADDC--NSGKCT--LLLHGYLRAHCLSVNQLVHIS 292
+ L WR +L+ ++ DV D KC ++L+GY+R L +VHI+
Sbjct: 249 FRPL---QWRGAHSYLLVDRIEDVTNTDRVRRDPKCDREVVLYGYVRGVPLKQEHMVHIA 305
Query: 293 GAGDFQLGKIEILKDPFPL-NARKESDAMESDEI 325
G GD ++ ++ ++ DP PL K+ +E + +
Sbjct: 306 GLGDARIDELNVIPDPCPLPGTEKKRSLLEKERL 339
Score = 123 (48.4 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 48/186 (25%), Positives = 81/186 (43%)
Query: 559 LYVRLHIKEVPAGIAHRLCEMAERS-PLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAK 617
LYVRL K++PA E + S P++ L E + ++ VKKH Y +K
Sbjct: 769 LYVRLGFKQLPA----EFIENFDASYPVLVGALNMTEENVGYVNCKVKKHRWYKKILKTG 824
Query: 618 EELIFHVGFRQFVARPIFSS--DNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVL 675
+ LI +G+R+F I++ DN K H C S+ + + PI + L
Sbjct: 825 DPLIISMGWRRFQTVAIYAKVEDNFRQRYLKYTPN-HVTC-SM-TFWGPITPQNTGFLAL 881
Query: 676 KSXXXXXXXXX------XXXXSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPE 729
++ + +D I+KK+ L G+P ++ K A V+ MF++
Sbjct: 882 QTVRQDQEEMRRLGFRIAATGCVTEVDKSSQIMKKLKLVGHPFKIYKKTAFVKDMFNSSL 941
Query: 730 DVRWFK 735
+V F+
Sbjct: 942 EVAKFE 947
Score = 42 (19.8 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 416 DQEDRGFPGYEGTNNSDIDDDQA 438
D+E + + +N SD DD++A
Sbjct: 481 DEEYQSLGNVKTSNESDSDDEEA 503
Score = 38 (18.4 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 8/36 (22%), Positives = 19/36 (52%)
Query: 705 IVLTGYPQRVSKLKAIVRYMFHNPEDVRWFKVKRAL 740
+V + Y Q+VSK+ ++ F + ++K+ +
Sbjct: 1086 VVNSPYEQKVSKMMKMIETNFKDKRQRERMEMKKRI 1121
>GENEDB_PFALCIPARUM|PFA0330w [details] [associations]
symbol:AARP2 "pfAARP2 protein" species:5833
"Plasmodium falciparum" [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 GO:GO:0005525 GO:GO:0005886 GO:GO:0005634
GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 EMBL:AL844501
GenomeReviews:AL844501_GR RefSeq:XP_001350998.1
ProteinModelPortal:Q8I275 IntAct:Q8I275 MINT:MINT-1623490
EnsemblProtists:PFA0330w:mRNA GeneID:813203 KEGG:pfa:PFA_0330w
HOGENOM:HOG000065791 ProtClustDB:CLSZ2514882 Uniprot:Q8I275
Length = 1434
Score = 146 (56.5 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 50/221 (22%), Positives = 101/221 (45%)
Query: 516 KESLPP-EYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAH 574
KE+L + ++ +KF T+K N+ SV YVR+ + I
Sbjct: 1017 KENLKKLKEEKLIEKEKFRETEKIGVLNS------GYGSSVNIGEYVRIELN-----IEK 1065
Query: 575 RLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPI 634
+ + + + +I G+ +E K S++H +KKH + +++ + LIF VG+R++ + PI
Sbjct: 1066 KKLAILKNNLIICGGIQTYEEKDSLIHCRIKKHRWFPKLLRSNDPLIFSVGWRRYQSIPI 1125
Query: 635 FSSDNMNSDKHKMERF----LHAGCFSVASIYAPICFPPLPLIVLKSXXXXXXXXXXXXX 690
+S N+ + + ++ +H C + Y P+ ++ L +
Sbjct: 1126 YSISERNNVRLRYLKYTTEHMHCNC----TFYGPLASVNSGILALYNYKKVPFYRICING 1181
Query: 691 SLRSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDV 731
+ + + I+KK+ L G P ++ K A V+ MF++ +V
Sbjct: 1182 LIIETNNNLNIMKKLKLIGEPYKIFKNTAFVKNMFNSDLEV 1222
Score = 93 (37.8 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 62/301 (20%), Positives = 123/301 (40%)
Query: 10 KSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLR-DQKRLALLKE 68
K HK + K S+ + + K+ + G K+A ++ + ++K+L + +
Sbjct: 6 KHHKKKKVGKKSKKKKINKNGNNKKYHKAFA-FSGGIKSAHRRKQHLFELEEKKLRV--Q 62
Query: 69 KRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSSTVSSSKYRLRTSVL 128
K G S P ++V+ G + V +++ + L++ + +S L+
Sbjct: 63 KVYKEGNKSSPLIVVIQG-AKGVGKSTLLKSLIKYYVGITINNIKGPISIFTKNLKRYTF 121
Query: 129 QAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRSLGLPSTAVL 188
+ D++ +++AK+AD+ SY I+ + L++ + GLP +
Sbjct: 122 IEVNDDILHMIDVAKIADICILVIDG--------SYGIELETLEFLNILYTHGLPKVLGV 173
Query: 189 IRDLPT--DLKKRKDLKKMCISSLTSEFPEDCK-FYAAD------TKDELH---KFLWLF 236
+ L D K + KK + E E K F+ + K E+ KFL +
Sbjct: 174 VTHLDKFKDSKSIRKRKKKLNKRYSEELVEGSKLFFLSGIQNNRYNKTEIRNLCKFLSVI 233
Query: 237 KEQRLTVPHWRNQRPFLMAQKVDVVADDCN-SGKCTLLLHGYLRAHCLSVNQLVHISGAG 295
K+ ++ WR Q +++ K+DV DD + + T + H + N + H S
Sbjct: 234 KKPIIS---WREQHGYILGLKLDV--DDLLINNQITSQKNNLQSEHVHNENYVNHASYDN 288
Query: 296 D 296
D
Sbjct: 289 D 289
Score = 91 (37.1 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 264 DCNSGKCTLLLHGYLRAHCLSVNQLVHISGAGDFQLGKIEILKDPFPLNARKES 317
+C+ K + + GY+ + NQ VHI GD ++ I+IL++PF L+ +K++
Sbjct: 306 NCDE-KIKISIEGYVYGSKIYKNQKVHIPNIGDVEIDNIQILQEPFKLDEQKKN 358
Score = 43 (20.2 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 416 DQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTENDS 453
D +D G + + +D DDD + DD ++D+
Sbjct: 444 DDDDVGDDNVDDDDGNDDDDDDNDDDDNDDDDNDDDDN 481
Score = 42 (19.8 bits), Expect = 6.7e-10, Sum P(3) = 6.7e-10
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 416 DQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTEND 452
D +D G + ++ D DDD + DDG ++D
Sbjct: 427 DDDDDDV-GDDNVDDGDDDDDDVGDDNVDDDDGNDDD 462
Score = 41 (19.5 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 426 EGTNNSDIDDDQASLNFRYADDGTEND 452
EG + D DDD + DDG ++D
Sbjct: 421 EGGGDGDDDDDDVGDD--NVDDGDDDD 445
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 426 EGTNNSDIDDDQASLNFRYADDGTEND 452
E ++ + DDD+ + DD END
Sbjct: 689 ENDDDEENDDDENDDDEENDDDDDEND 715
Score = 39 (18.8 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 416 DQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTEND 452
D +D G E ++ + DDD+ + DD ++D
Sbjct: 668 DYDDDENVGDENDDDEENDDDENDDDEENDDDENDDD 704
Score = 38 (18.4 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 429 NNSDIDDDQASLNFRYADDGTEND 452
N+ D +DD + DD END
Sbjct: 685 NDDDENDDDEENDDDENDDDEEND 708
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 440 LNFRYADDGTENDSVMMEGE 459
LN +DDG ND + G+
Sbjct: 627 LNADMSDDGGNNDINIYNGQ 646
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 418 EDRGFPGYEGTNNSDIDDDQASLNFRYADDGTEN 451
+D + +NSD ++ + N +DD N
Sbjct: 948 DDNNINSDDNNSNSDDNNSNSDDNNSNSDDNNSN 981
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 416 DQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTEND 452
D D G + + ++DDD + + +D +ND
Sbjct: 436 DNVDDGDDDDDDVGDDNVDDDDGNDDDDDDNDDDDND 472
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 415 LDQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTENDS 453
+D +D + ++ D DDD + DD +N++
Sbjct: 453 VDDDDGNDDDDDDNDDDDNDDDDNDDDDNDDDDDDDNEN 491
>UNIPROTKB|Q8I275 [details] [associations]
symbol:AARP2 "PfAARP2 protein" species:36329 "Plasmodium
falciparum 3D7" [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 GO:GO:0005525 GO:GO:0005886 GO:GO:0005634
GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 EMBL:AL844501
GenomeReviews:AL844501_GR RefSeq:XP_001350998.1
ProteinModelPortal:Q8I275 IntAct:Q8I275 MINT:MINT-1623490
EnsemblProtists:PFA0330w:mRNA GeneID:813203 KEGG:pfa:PFA_0330w
HOGENOM:HOG000065791 ProtClustDB:CLSZ2514882 Uniprot:Q8I275
Length = 1434
Score = 146 (56.5 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 50/221 (22%), Positives = 101/221 (45%)
Query: 516 KESLPP-EYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAH 574
KE+L + ++ +KF T+K N+ SV YVR+ + I
Sbjct: 1017 KENLKKLKEEKLIEKEKFRETEKIGVLNS------GYGSSVNIGEYVRIELN-----IEK 1065
Query: 575 RLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPI 634
+ + + + +I G+ +E K S++H +KKH + +++ + LIF VG+R++ + PI
Sbjct: 1066 KKLAILKNNLIICGGIQTYEEKDSLIHCRIKKHRWFPKLLRSNDPLIFSVGWRRYQSIPI 1125
Query: 635 FSSDNMNSDKHKMERF----LHAGCFSVASIYAPICFPPLPLIVLKSXXXXXXXXXXXXX 690
+S N+ + + ++ +H C + Y P+ ++ L +
Sbjct: 1126 YSISERNNVRLRYLKYTTEHMHCNC----TFYGPLASVNSGILALYNYKKVPFYRICING 1181
Query: 691 SLRSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDV 731
+ + + I+KK+ L G P ++ K A V+ MF++ +V
Sbjct: 1182 LIIETNNNLNIMKKLKLIGEPYKIFKNTAFVKNMFNSDLEV 1222
Score = 93 (37.8 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 62/301 (20%), Positives = 123/301 (40%)
Query: 10 KSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLR-DQKRLALLKE 68
K HK + K S+ + + K+ + G K+A ++ + ++K+L + +
Sbjct: 6 KHHKKKKVGKKSKKKKINKNGNNKKYHKAFA-FSGGIKSAHRRKQHLFELEEKKLRV--Q 62
Query: 69 KRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSSTVSSSKYRLRTSVL 128
K G S P ++V+ G + V +++ + L++ + +S L+
Sbjct: 63 KVYKEGNKSSPLIVVIQG-AKGVGKSTLLKSLIKYYVGITINNIKGPISIFTKNLKRYTF 121
Query: 129 QAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVFRSLGLPSTAVL 188
+ D++ +++AK+AD+ SY I+ + L++ + GLP +
Sbjct: 122 IEVNDDILHMIDVAKIADICILVIDG--------SYGIELETLEFLNILYTHGLPKVLGV 173
Query: 189 IRDLPT--DLKKRKDLKKMCISSLTSEFPEDCK-FYAAD------TKDELH---KFLWLF 236
+ L D K + KK + E E K F+ + K E+ KFL +
Sbjct: 174 VTHLDKFKDSKSIRKRKKKLNKRYSEELVEGSKLFFLSGIQNNRYNKTEIRNLCKFLSVI 233
Query: 237 KEQRLTVPHWRNQRPFLMAQKVDVVADDCN-SGKCTLLLHGYLRAHCLSVNQLVHISGAG 295
K+ ++ WR Q +++ K+DV DD + + T + H + N + H S
Sbjct: 234 KKPIIS---WREQHGYILGLKLDV--DDLLINNQITSQKNNLQSEHVHNENYVNHASYDN 288
Query: 296 D 296
D
Sbjct: 289 D 289
Score = 91 (37.1 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 264 DCNSGKCTLLLHGYLRAHCLSVNQLVHISGAGDFQLGKIEILKDPFPLNARKES 317
+C+ K + + GY+ + NQ VHI GD ++ I+IL++PF L+ +K++
Sbjct: 306 NCDE-KIKISIEGYVYGSKIYKNQKVHIPNIGDVEIDNIQILQEPFKLDEQKKN 358
Score = 43 (20.2 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 416 DQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTENDS 453
D +D G + + +D DDD + DD ++D+
Sbjct: 444 DDDDVGDDNVDDDDGNDDDDDDNDDDDNDDDDNDDDDN 481
Score = 42 (19.8 bits), Expect = 6.7e-10, Sum P(3) = 6.7e-10
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 416 DQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTEND 452
D +D G + ++ D DDD + DDG ++D
Sbjct: 427 DDDDDDV-GDDNVDDGDDDDDDVGDDNVDDDDGNDDD 462
Score = 41 (19.5 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 426 EGTNNSDIDDDQASLNFRYADDGTEND 452
EG + D DDD + DDG ++D
Sbjct: 421 EGGGDGDDDDDDVGDD--NVDDGDDDD 445
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 426 EGTNNSDIDDDQASLNFRYADDGTEND 452
E ++ + DDD+ + DD END
Sbjct: 689 ENDDDEENDDDENDDDEENDDDDDEND 715
Score = 39 (18.8 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 416 DQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTEND 452
D +D G E ++ + DDD+ + DD ++D
Sbjct: 668 DYDDDENVGDENDDDEENDDDENDDDEENDDDENDDD 704
Score = 38 (18.4 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 429 NNSDIDDDQASLNFRYADDGTEND 452
N+ D +DD + DD END
Sbjct: 685 NDDDENDDDEENDDDENDDDEEND 708
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 440 LNFRYADDGTENDSVMMEGE 459
LN +DDG ND + G+
Sbjct: 627 LNADMSDDGGNNDINIYNGQ 646
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 418 EDRGFPGYEGTNNSDIDDDQASLNFRYADDGTEN 451
+D + +NSD ++ + N +DD N
Sbjct: 948 DDNNINSDDNNSNSDDNNSNSDDNNSNSDDNNSN 981
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 416 DQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTEND 452
D D G + + ++DDD + + +D +ND
Sbjct: 436 DNVDDGDDDDDDVGDDNVDDDDGNDDDDDDNDDDDND 472
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 415 LDQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTENDS 453
+D +D + ++ D DDD + DD +N++
Sbjct: 453 VDDDDGNDDDDDDNDDDDNDDDDNDDDDNDDDDDDDNEN 491
>UNIPROTKB|F1RG23 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:CU407077 Ensembl:ENSSSCT00000011164 OMA:DIAFVRT Uniprot:F1RG23
Length = 399
Score = 159 (61.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 43/181 (23%), Positives = 86/181 (47%)
Query: 559 LYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKE 618
+YVR+ I+ VP + P+I GL E + + +KKH Y +K+++
Sbjct: 1 MYVRIEIENVPCEF---VLNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRD 57
Query: 619 ELIFHVGFRQFVARPIFSSDNMNSDKHKME---RFLHAGCFSVASIYAPICFPPLPLIVL 675
+IF VG+R+F P++ ++ N + ++ + +H G A+ + PI + +
Sbjct: 58 PIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCG----ATFWGPITPQGTGFLAI 113
Query: 676 KSXXXXXXXXXXXXXSL-RSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWF 734
+S + +D I+KK+ LTG+P ++ K + ++ MF++ +V F
Sbjct: 114 QSVSGIMPDFRIAATGVVLDLDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVARF 173
Query: 735 K 735
+
Sbjct: 174 E 174
>UNIPROTKB|I3LND5 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 GO:GO:0005525 GO:GO:0005634 GO:GO:0003924
GO:GO:0006184 GO:GO:0042254 GeneTree:ENSGT00550000074774
EMBL:CU407077 Ensembl:ENSSSCT00000026474 OMA:HEESDHE Uniprot:I3LND5
Length = 763
Score = 155 (59.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 83/346 (23%), Positives = 152/346 (43%)
Query: 10 KSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRN-KMLRD--QKRLALL 66
K H+ + S + K +D ++G + + KA VQ +M R + R L
Sbjct: 7 KKHRKKNSGPKAEKKKKRHLQDL-QLGDEEDARKRNPKAFAVQSAVRMARSFHRNRTQDL 65
Query: 67 KEKRASSGIAS------PPRVIVLFG---LSASVNLNSVREDLLRQLSSEGTGALSSTVS 117
K K+ + PP V+V+ G + S + + + RQ +E G + T+
Sbjct: 66 KTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPV--TIV 123
Query: 118 SSKYRLRTSVLQAPHGDLVGCMEMAKVADLXXXXXXXXXXXXXXMSYYIDSFGNQCLSVF 177
S K R R ++++ D+ +++AKVADL + +++F + L++
Sbjct: 124 SGKKR-RLTIIECGC-DINMMIDLAKVADLVLMLIDAS------FGFEMETF--EFLNIC 173
Query: 178 RSLGLPSTAVLIRDLPTDLKKRKDLKK----MCISSLTSEFPEDCKFYAADT------KD 227
+ G P ++ L + K K LKK + T +P FY +
Sbjct: 174 QVHGFPKIMGVLTHLDS-FKYNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQ 232
Query: 228 ELH---KFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVA--DDCNSG-KCT--LLLHGYLR 279
E+H +F+ + K + LT W+ P+++A +++ + +D + KC + L+GYLR
Sbjct: 233 EIHNLGRFITVMKFRPLT---WQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLR 289
Query: 280 -AHCLSVNQLVHISGAGDFQLGKIEILKDPFPLNARKESDAMESDE 324
AH + +Q +HI G GDF + + L DP L +++ + E
Sbjct: 290 GAHLKNKSQ-IHIPGVGDFAVSDVSFLPDPCALPEQQKKRCLNEKE 334
>RGD|1308043 [details] [associations]
symbol:Bms1 "BMS1 homolog, ribosome assembly protein (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1308043
InterPro:IPR007034 Pfam:PF04950 IPI:IPI00358418 EMBL:BC092659
UniGene:Rn.41094 STRING:Q561Z9 UCSC:RGD:1308043
Genevestigator:Q561Z9 Uniprot:Q561Z9
Length = 392
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 37/156 (23%), Positives = 76/156 (48%)
Query: 584 PLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSD 643
P+I GL E + + +KKH Y +K+++ +IF VG+R+F P++ ++ N
Sbjct: 18 PIILGGLGNSEGTVGYVQMRLKKHRWYKKILKSRDPVIFSVGWRRFQTIPLYYIEDHNGR 77
Query: 644 KHKME---RFLHAGCFSVASIYAPICFPPLPLIVLKSXXXXXXXXXXXXXSL-RSIDPDR 699
+ ++ + +H G A+ + PI + ++S + +D
Sbjct: 78 QRLLKYTPQHMHCG----ATFWGPITPQGTGFLAIQSVSGAMPEFRIAATGVVLDLDKSI 133
Query: 700 IILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFK 735
I+KK+ LTG+P ++ K + ++ MF++ +V F+
Sbjct: 134 KIVKKLKLTGFPFKIFKNTSFIKGMFNSALEVAKFE 169
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 745 683 0.00079 121 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 45
No. of states in DFA: 625 (66 KB)
Total size of DFA: 354 KB (2178 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 56.71u 0.11s 56.82t Elapsed: 00:00:02
Total cpu time: 56.73u 0.11s 56.84t Elapsed: 00:00:02
Start: Mon May 20 20:33:58 2013 End: Mon May 20 20:34:00 2013