Query 004551
Match_columns 745
No_of_seqs 333 out of 2073
Neff 7.5
Searched_HMMs 29240
Date Tue Mar 26 17:44:03 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004551.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1858-1862//hhsearch_pdb/004551hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dfs_A Myosin-5A; myosin-V, in 1.0 1 1 1113.9 52.1 517 1-520 328-864 (1080)
2 1i84_S Smooth muscle myosin he 1.0 1 1 1021.9 37.9 469 1-469 354-841 (1184)
3 1kk8_A Myosin heavy chain, str 1.0 1 1 983.9 34.5 462 1-492 351-825 (837)
4 4anj_A Unconventional myosin-V 1.0 1 1 978.3 23.8 484 1-493 340-845 (1052)
5 1w7j_A Myosin VA; motor protei 1.0 1 1 955.1 31.0 446 1-449 328-794 (795)
6 2ycu_A Non muscle myosin 2C, a 1.0 1 1 954.7 38.3 506 1-507 323-854 (995)
7 1g8x_A Myosin II heavy chain f 1.0 1 1 929.8 44.4 479 1-511 347-836 (1010)
8 2v26_A Myosin VI; calmodulin-b 1.0 1 1 912.6 31.1 428 1-437 336-784 (784)
9 4db1_A Myosin-7; S1DC, cardiac 1.0 1 1 912.5 26.7 418 1-423 352-781 (783)
10 1w9i_A Myosin II heavy chain; 1.0 1 1 904.7 28.5 412 1-427 347-766 (770)
No 1
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=1.00 E-value=1 Score=1113.89 Aligned_cols=517 Identities=40% Similarity=0.683 Sum_probs=470.4
Q ss_pred CHHHHHHHCCCEEEEECCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 92478866291899728988200079689999999709998989985613264555825885079554378899999999
Q 004551 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSI 80 (745)
Q Consensus 1 ilAaIL~LGNi~F~~~~~~~~~~~~~~~~l~~~a~LLGv~~~~L~~aL~~~~~~~~~e~i~~~l~~~~A~~~rdaLak~L 80 (745)
|||||||||||+|...+++......+.+.+..+|.||||++++|..+||++++.+++|.+++++++++|.++||+|||+|
T Consensus 328 ilaaILhLGni~F~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~~~~~e~i~~~~~~~qa~~~rdalak~l 407 (1080)
T 2dfs_A 328 ILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHI 407 (1080)
T ss_dssp HHHHHHHHTTCCCEEETTTEEECCSSCHHHHHHHHHHTCCHHHHHHHHHEEEECC----EEEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEECCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCEEEECCCHHHHHHHHHHHHHHH
T ss_conf 99999952673487358866042388599999999969899999997436689958941885898899999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999998100345798776620256313665446757234567421134677899996523227776422985322
Q 004551 81 YACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAK 160 (745)
Q Consensus 81 Y~~LF~wiV~~IN~~L~~~~~~~~~~I~iLDi~GFE~f~~NsfEQlciNyanE~Lq~~f~~~~f~~eqeey~~EgI~~~~ 160 (745)
|++||+|||.+||.+|.++. ....+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||..|||+|+.
T Consensus 408 Y~~LF~wlV~~iN~~l~~~~-~~~~~IgvLDI~GFE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~ 486 (1080)
T 2dfs_A 408 YANLFNWIVDHVNKALHSTV-KQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTL 486 (1080)
T ss_dssp HHHHHHHHHHHHHHHHCCSS-CCCEEEEEEEECCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHHHHHCCCC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99899999999998623653-45725776326776666757799999875568999999987638899877535986310
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHC-CCCCCCCCCC--CCCEEEEECCCEEEEECCCHH
Q ss_conf 4457957588853128775221430000799998078999998770-7999865789--995389830420278042020
Q 004551 161 VDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHL-NSNPCFRGER--DKSFTVSHYAGEVIYDTTGFL 237 (745)
Q Consensus 161 i~~~dn~~~ldlie~k~~Gll~lLdee~~~p~~td~~f~~kl~~~~-~~~~~~~~~~--~~~F~I~HyaG~V~Y~~~gfl 237 (745)
|+|.||++|||||+++ .|||++|||||++|++||.+|++||++.+ ++||+|..++ +..|+|+||||+|.|+++||+
T Consensus 487 i~f~dn~~~idlie~~-~Gil~lLdee~~~p~~tD~~f~~kl~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfl 565 (1080)
T 2dfs_A 487 IDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFL 565 (1080)
T ss_dssp CCCCCCHHHHHHHHST-TSHHHHHHHHTTSTTCCHHHHHHHHHHHHBTTBSSEECCTTCSSEEEEECSSCEEEEECTTHH
T ss_pred CCCCCCHHHHHHHHCC-CCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEEEEEHHHHH
T ss_conf 3665658899988367-861322431015999872899999999851579885478888995487716257997025588
Q ss_pred HHHCCCCCHHHHHHHHHC-CCCHH-HHHHHCCCCCC---CC-----C----CCCCCC--CCCCCCCCCCCHHHHHHHHHH
Q ss_conf 430020309899999424-88236-88651001259---99-----8----668775--679988787548999999999
Q 004551 238 EKNRDLLHLDSIELLSSC-SCHLP-QIFASNMLSQS---NK-----P----VVGPLY--KAGGADSQKLSVATKFKGQLF 301 (745)
Q Consensus 238 ekN~D~l~~~~~~ll~~S-~~~~~-~lf~~~~~~~~---~~-----~----~~~~~~--~~~~~~~~~~tv~~~f~~sL~ 301 (745)
+||+|+++++++.+|++| +++++ .+|.......+ .. + ...+.+ ..++....++||+++|+.||+
T Consensus 566 eKN~D~l~~~~~~ll~~S~~~~~v~~lf~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~fk~sL~ 645 (1080)
T 2dfs_A 566 EKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLH 645 (1080)
T ss_dssp HHHBCCCCHHHHHHHHTCSSCSHHHHSCC-------------------------------------CCCBHHHHHHHHHH
T ss_pred HHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 74346455999999871243279999845543233555444345564332344654456665546778858999999999
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCHH
Q ss_conf 99999712598246603789989988766279999974219542232330278875454359986501323456789928
Q 004551 302 QLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPL 381 (745)
Q Consensus 302 ~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gile~i~i~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~~d~~ 381 (745)
.||++|.+|.||||||||||+.+.|+.||..+|++||||+||||+++|+|.|||+|++|.+|+.||++|+|...+..|++
T Consensus 646 ~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~~~eF~~RY~~L~~~~~~~~d~k 725 (1080)
T 2dfs_A 646 LLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDRK 725 (1080)
T ss_dssp HHHHHHHSSEEEEEEEECCCSSCCTTCCCHHHHHHHHHTTTHHHHHHHHTTSCCEEEEHHHHHHHHTTTSCGGGCCSSHH
T ss_pred HHHHHHHHCCCEEEEEECCCCCCCCHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 99999970698668875688878810067786287985266177775875387851148899999999777667777747
Q ss_pred HHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999998871869865252021100002334423222233310-066655453023100110111234666777778899
Q 004551 382 SVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLH-GILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEK 460 (745)
Q Consensus 382 ~~~~~ll~~~~~~~~~~~iG~tkVFlr~~~~~~Le~~r~~~l~-aai~IQ~~~Rg~~~R~~~~~~r~a~i~IQs~~Rg~~ 460 (745)
+.|..+|..++++++.|++|+|||||+.|.++.||..|...+. +++.||++||||++|+.|++++.+++.||++|||++
T Consensus 726 ~~~~~il~~~~~~~~~~~~G~TKVF~r~g~l~~LE~~R~~~l~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~ 805 (1080)
T 2dfs_A 726 QTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQ 805 (1080)
T ss_dssp HHHHHHHTTTSCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999836881451430330000220256777778888887777888887788999985012778999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999886678999998775667999999899998899999999539999875341066
Q 004551 461 IRKEYALVLQRHRAAVVIQRQIKSRVARQKLKNIKYSSIMIQSVIRGWLVRRCSGDICLL 520 (745)
Q Consensus 461 aRr~~~~~~~~~~Aa~~IQ~~~R~~~~R~~~~~~~~a~v~iQs~~R~~~aRk~~~~l~~~ 520 (745)
+|+.+..++ ...||++||++||||.+|+.|...+.+++.||+.|||+++|+.++.++..
T Consensus 806 aR~~~~~lr-~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~~lr~~ 864 (1080)
T 2dfs_A 806 ARCYATFLR-RTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLRE 864 (1080)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 762022122-00467778788754999999999988889999999889999999999987
No 2
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=1.00 E-value=1 Score=1021.91 Aligned_cols=469 Identities=34% Similarity=0.593 Sum_probs=415.1
Q ss_pred CHHHHHHHCCCEEEEECCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 92478866291899728988200079689999999709998989985613264555825885079554378899999999
Q 004551 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSI 80 (745)
Q Consensus 1 ilAaIL~LGNi~F~~~~~~~~~~~~~~~~l~~~a~LLGv~~~~L~~aL~~~~~~~~~e~i~~~l~~~~A~~~rdaLak~L 80 (745)
|||||||||||+|...++++.+.+.+.+.+..+|.||||++++|..+||++++.+|++.+++++++++|.++||+|||+|
T Consensus 354 ilaaiLhlGni~f~~~~~~~~~~~~~~~~~~~~a~lLg~~~~~l~~~l~~~~~~~~~e~~~~~~~~~~a~~~rdalak~l 433 (1184)
T 1i84_S 354 VVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAK 433 (1184)
T ss_dssp HHHHHHHTTTCCCBCCTTTSCCBCCCSHHHHHHHHHTTSCHHHHHHHHHSCCCCCTTSCCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCEEECCCCHHHHHHHHHHHHHHH
T ss_conf 99999941575154158876751688599999999979899999997558478838804850899999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999998100345798776620256313665446757234567421134677899996523227776422985322
Q 004551 81 YACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAK 160 (745)
Q Consensus 81 Y~~LF~wiV~~IN~~L~~~~~~~~~~I~iLDi~GFE~f~~NsfEQlciNyanE~Lq~~f~~~~f~~eqeey~~EgI~~~~ 160 (745)
|++||+|||.+||.+|++.......+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||..|||+|+.
T Consensus 434 Y~~lF~wlv~~iN~~l~~~~~~~~~~IgvLDi~GFE~f~~NsfeQlciNy~nEkLq~~f~~~~f~~eq~ey~~Egi~~~~ 513 (1184)
T 1i84_S 434 FERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF 513 (1184)
T ss_dssp HHHHHHHHHHHHTTTCC------CEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCSCCC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999988637886677535888624786777744399998899889999999876549999999964997501
Q ss_pred CCC-CCCHHHHHHHHCC--CCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCC----CCCEEEEECCCEEEEEC
Q ss_conf 445-7957588853128--7752214300007999980789999987707999865789----99538983042027804
Q 004551 161 VDF-EDNKDCLNLFEKK--PLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGER----DKSFTVSHYAGEVIYDT 233 (745)
Q Consensus 161 i~~-~dn~~~ldlie~k--~~Gll~lLdee~~~p~~td~~f~~kl~~~~~~~~~~~~~~----~~~F~I~HyaG~V~Y~~ 233 (745)
|+| .||++|||||+++ |.|||++|||||++|++||.+|++||++.+++||+|..++ +..|+|+||||+|.|++
T Consensus 514 i~~~~dn~~~~~lie~~~~~~Gil~lLdee~~~p~~td~~~~~kl~~~~~~~~~~~~~~~~~~~~~F~i~Hyag~V~Y~~ 593 (1184)
T 1i84_S 514 IDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNA 593 (1184)
T ss_dssp CCCCCCCHHHHHTTSCCSSSCCHHHHHHHTTSCTTCCHHHHHHHHHHHTSSCTTEEECSSCTTTCEEEEECSSCEEEEEC
T ss_pred CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEECC
T ss_conf 36577828999998378999972122046518999976999999999737897815798788999279988974698626
Q ss_pred CCHHHHHCCCCCHHHHHHHHHCCCCHH-HHHHHCCCCCCCCCCCCCCCC-----CCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 202043002030989999942488236-886510012599986687756-----79988787548999999999999997
Q 004551 234 TGFLEKNRDLLHLDSIELLSSCSCHLP-QIFASNMLSQSNKPVVGPLYK-----AGGADSQKLSVATKFKGQLFQLMQRL 307 (745)
Q Consensus 234 ~gflekN~D~l~~~~~~ll~~S~~~~~-~lf~~~~~~~~~~~~~~~~~~-----~~~~~~~~~tv~~~f~~sL~~Lm~~L 307 (745)
+||++||+|+++++++.+|++|+++++ .+|.......+.....++... ........+||+++|+.||+.||.+|
T Consensus 594 ~gfl~kN~d~l~~~~~~ll~~s~~~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~~l~~L~~~l 673 (1184)
T 1i84_S 594 SAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTL 673 (1184)
T ss_dssp TTHHHHHHCCCCHHHHHHHHTCSCHHHHHHHSCCTTCCCC---------------------CCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 88134225732199999999585399999850202334332234555556676556668877727999999999999999
Q ss_pred HCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCC--CCHHHHHH
Q ss_conf 1259824660378998998876627999997421954223233027887545435998650132345678--99289999
Q 004551 308 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSV 385 (745)
Q Consensus 308 ~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gile~i~i~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~--~d~~~~~~ 385 (745)
.+|.||||||||||+.+.|+.||..+|++||||+||||+|+|+|.|||+|++|.+|+.||++|.|...+. .|.+..|.
T Consensus 674 ~~t~phfvRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~R~~~~~F~~ry~~L~~~~~~~~~~d~k~~~~ 753 (1184)
T 1i84_S 674 RNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACI 753 (1184)
T ss_dssp TTSEEEECCEECCCSSCCSSCCCHHHHHHHHHHTTHHHHHHHHHHSCCEEEEHHHHHHHTTTTCTTTSCSSCCCHHHHHH
T ss_pred HHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf 83698861565778867898666788799985068647777686358643569999999997463647767778899999
Q ss_pred HHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHCCCCCHHHHHHH---HHHHHHHHHHHHHHH
Q ss_conf 998871869865252021100002334423222233310-0666554530231001101112---346667777788999
Q 004551 386 AILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLH-GILRVQSCFRGHQARLCLKELR---RGIVALQSFIRGEKI 461 (745)
Q Consensus 386 ~ll~~~~~~~~~~~iG~tkVFlr~~~~~~Le~~r~~~l~-aai~IQ~~~Rg~~~R~~~~~~r---~a~i~IQs~~Rg~~a 461 (745)
.+|..++++++.|++|+|+|||+.|.+..||..|...+. .++.||++||||++|+.|.+++ .++++||+.||+|++
T Consensus 754 ~lL~~l~l~~~~~~iG~TKVF~r~g~l~~LE~~r~~~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~ 833 (1184)
T 1i84_S 754 LMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMN 833 (1184)
T ss_dssp HHHHTTTCCTTTCCBCSSEEEECTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99997599912046767589980018999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHH
Q ss_conf 99999886
Q 004551 462 RKEYALVL 469 (745)
Q Consensus 462 Rr~~~~~~ 469 (745)
++.+..++
T Consensus 834 ~k~~~~~r 841 (1184)
T 1i84_S 834 VXHWPWMX 841 (1184)
T ss_dssp HTTCHHHH
T ss_pred HHHHHHHH
T ss_conf 74108999
No 3
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=1.00 E-value=1 Score=983.92 Aligned_cols=462 Identities=40% Similarity=0.680 Sum_probs=412.4
Q ss_pred CHHHHHHHCCCEEEEECCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 92478866291899728988200079689999999709998989985613264555825885079554378899999999
Q 004551 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSI 80 (745)
Q Consensus 1 ilAaIL~LGNi~F~~~~~~~~~~~~~~~~l~~~a~LLGv~~~~L~~aL~~~~~~~~~e~i~~~l~~~~A~~~rdaLak~L 80 (745)
|||||||||||+|...++++.+.+.+.+.+..+|.||||++++|..+||++++.+++|.++++++++||.++||||||+|
T Consensus 351 ilAaILhLGNi~F~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~l 430 (837)
T 1kk8_A 351 CTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSL 430 (837)
T ss_dssp HHHHHHHHTTCCEEC----CCCEESCSHHHHHHHHHHTSCHHHHHHHHHSCEEC----CEECCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCEEEECCCHHHHHHHHHHHHHHH
T ss_conf 99999852563587338877531388799999999979899999997337488728706972899999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999998100345798776620256313665446757234567421134677899996523227776422985322
Q 004551 81 YACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAK 160 (745)
Q Consensus 81 Y~~LF~wiV~~IN~~L~~~~~~~~~~I~iLDi~GFE~f~~NsfEQlciNyanE~Lq~~f~~~~f~~eqeey~~EgI~~~~ 160 (745)
|++||+|||.+||.+|.+. .....+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||..|||+|+.
T Consensus 431 Y~rLF~wlV~~IN~~l~~~-~~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~ 509 (837)
T 1kk8_A 431 YDRMFNWLVRRVNKTLDTK-AKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEF 509 (837)
T ss_dssp HHHHHHHHHHHHHHHHCCC-CCCCEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHHHHHHHHHHHHCCCC-CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 9999999999999860588-878626898735775656644189999887568999998775208889876304876243
Q ss_pred CCC-CCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHH-HHHCCCCCCCCCCC--------CCCEEEEECCCEEE
Q ss_conf 445-795758885312877522143000079999807899999-87707999865789--------99538983042027
Q 004551 161 VDF-EDNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKL-KQHLNSNPCFRGER--------DKSFTVSHYAGEVI 230 (745)
Q Consensus 161 i~~-~dn~~~ldlie~k~~Gll~lLdee~~~p~~td~~f~~kl-~~~~~~~~~~~~~~--------~~~F~I~HyaG~V~ 230 (745)
|+| .||++|+|||++ |.|||++|||||++|++||.+|++|| .+++++||+|..++ ...|+|+||||+|.
T Consensus 510 i~f~~dn~~~idLiek-p~GIlslLDEec~~p~~tD~tf~~kl~~~~~~~~~~f~~p~~~~~k~~~~~~F~I~HyAG~V~ 588 (837)
T 1kk8_A 510 IDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVP 588 (837)
T ss_dssp CCCCHHHHHHHHHHHS-TTSHHHHHHHHTTCTTCCHHHHHHHHHHHHTTTCSSEECCCSCSSTTCCCCSEEEEETTEEEE
T ss_pred CCCCCCHHHHHHHHHC-CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
T ss_conf 2666677999999726-876888878875499987589999999986078967157886444566678348761067646
Q ss_pred EECCCHHHHHCCCCCHHHHHHHHHCCCCHH-HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 804202043002030989999942488236-8865100125999866877567998878754899999999999999712
Q 004551 231 YDTTGFLEKNRDLLHLDSIELLSSCSCHLP-QIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLES 309 (745)
Q Consensus 231 Y~~~gflekN~D~l~~~~~~ll~~S~~~~~-~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~Lm~~L~~ 309 (745)
|+++||++||+|+++++++++|++|+++++ .+|..... .++. +. +..+.....+||+++|+.||+.||++|.+
T Consensus 589 Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~Lf~~~~~-~~g~---~~--~~k~~~~~~~Tv~~~fk~sL~~Lm~~L~~ 662 (837)
T 1kk8_A 589 YSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEE-PAGG---GK--KKKGKSSAFQTISAVHRESLNKLMKNLYS 662 (837)
T ss_dssp ECCSSHHHHHSCCCCHHHHHHHHTCSSHHHHHHTCC------------------------CCHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHCCCCC-CCCC---CC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 367778774145334999999874648899998356632-2477---88--87888888882699999999999999870
Q ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCC--CCHHHHHHHH
Q ss_conf 59824660378998998876627999997421954223233027887545435998650132345678--9928999999
Q 004551 310 TTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSVAI 387 (745)
Q Consensus 310 t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gile~i~i~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~--~d~~~~~~~l 387 (745)
|.||||||||||+.+.|+.||..+|++||||+||||+++|+|.|||+|++|.+|+.||++|.+..++. .|+++.|+.+
T Consensus 663 t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~R~~f~eF~~RY~~L~~~~~~~~~~d~k~~~~~l 742 (837)
T 1kk8_A 663 THPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKI 742 (837)
T ss_dssp EEEEEEEEECCCSSCCTTCCCHHHHHHHHTTSSSCC-----CCCSCEEEEHHHHHHHHGGGSGGGCCC---CHHHHHHHH
T ss_pred CCCEEEEEECCCCCCCCCCCCCHHEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf 59731441478865781002612110224156751899999874001366999999999963232556788889999999
Q ss_pred HHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88718698652520211000023344232222333100666554530231001101112346667777788999999998
Q 004551 388 LHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYAL 467 (745)
Q Consensus 388 l~~~~~~~~~~~iG~tkVFlr~~~~~~Le~~r~~~l~aai~IQ~~~Rg~~~R~~~~~~r~a~i~IQs~~Rg~~aRr~~~~ 467 (745)
|..++++++.|++|+|||||+.+.++.||..|...+.. .++.||++||||++|++|.+
T Consensus 743 l~~~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~----------------------~~~~iQa~~Rg~l~R~~~~k 800 (837)
T 1kk8_A 743 LAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSK----------------------IISMFQAHIRGYLIRKAYKK 800 (837)
T ss_dssp HHHHTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCEEECCEEEEEHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHH
T ss_conf 99739982005666779996152999999999998876----------------------79999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8667899999877566799999989
Q 004551 468 VLQRHRAAVVIQRQIKSRVARQKLK 492 (745)
Q Consensus 468 ~~~~~~Aa~~IQ~~~R~~~~R~~~~ 492 (745)
++.+..|+++||++||+|++|+.|.
T Consensus 801 ~~~~r~a~~~IQ~~~R~~~~~r~~~ 825 (837)
T 1kk8_A 801 LQDQRIGLSVIQRNIRKWLVLRNWQ 825 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 9999999999999999999973539
No 4
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=1.00 E-value=1 Score=978.34 Aligned_cols=484 Identities=31% Similarity=0.520 Sum_probs=424.0
Q ss_pred CHHHHHHHCCCEEEEECCC---CCEEECCHHHHHHHHHHCCCCHHHHHHHHCCCEEE-----ECCCEEEECCCHHHHHHH
Q ss_conf 9247886629189972898---82000796899999997099989899856132645-----558258850795543788
Q 004551 1 MLAAVLWLGNVSFTVIDNE---NHVEPVADEGLITVAKLIGCDIGELKLALSTRKMR-----VGNDTIVQNLTLSQATDT 72 (745)
Q Consensus 1 ilAaIL~LGNi~F~~~~~~---~~~~~~~~~~l~~~a~LLGv~~~~L~~aL~~~~~~-----~~~e~i~~~l~~~~A~~~ 72 (745)
|||||||||||+|...++. ..+.+.+.+.+..+|.||||++++|..+||++++. ++++.+++++++++|.++
T Consensus 340 iLAaILhLGNi~F~~~~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~aLt~r~~~~~~~~~~~e~i~~~l~~~qA~~~ 419 (1052)
T 4anj_A 340 VVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNA 419 (1052)
T ss_dssp HHHHHHHHHTCCEEC-------CEECGGGHHHHHHHHHHTTCCHHHHHHHHHEEC-------------CEECCHHHHHHH
T ss_pred HHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCEEEECCCCCCCEEEEECCCHHHHHHH
T ss_conf 99999961652677547778875235688589999999839999999998753534311335685289966999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999981003457987766202563136654467572345674211346778999965232277764
Q 004551 73 RDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYI 152 (745)
Q Consensus 73 rdaLak~LY~~LF~wiV~~IN~~L~~~~~~~~~~I~iLDi~GFE~f~~NsfEQlciNyanE~Lq~~f~~~~f~~eqeey~ 152 (745)
||||||+||++||+|||++||.+|.+. ....+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||.
T Consensus 420 rDaLAK~LY~rLF~wiV~~IN~~l~~~--~~~~~IGILDI~GFE~f~~NsFEQLCINyaNEkLQq~Fn~~vF~~EqeeY~ 497 (1052)
T 4anj_A 420 RDALAKTVYSHLFDHVVNRVNQCFPFE--TSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQ 497 (1052)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCS--CCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999987653156655--665257997147875435473999999887899999999860188999998
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCC------------CCCE
Q ss_conf 2298532244579575888531287752214300007999980789999987707999865789------------9953
Q 004551 153 QDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGER------------DKSF 220 (745)
Q Consensus 153 ~EgI~~~~i~~~dn~~~ldlie~k~~Gll~lLdee~~~p~~td~~f~~kl~~~~~~~~~~~~~~------------~~~F 220 (745)
+|||+|+.|+|.||++|||||+++|.|||++|||||++|++||.+|++||++.+++|++|..++ +..|
T Consensus 498 ~EgI~w~~I~f~DN~~~idLie~kp~GIl~lLDEe~~~p~~tD~~f~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F 577 (1052)
T 4anj_A 498 KEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGF 577 (1052)
T ss_dssp HTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHSSSCCHHHHHHHHHHTTTTCTTEECGGGCSCSTTTTCCTTSEE
T ss_pred HCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 54877665776893899999872763279998887568988578999999987166745467764555545566788971
Q ss_pred EEEECCCEEEEECCCHHHHHCCCCCHHHHHHHHHCCCCHH-HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 8983042027804202043002030989999942488236-886510012599986687756799887875489999999
Q 004551 221 TVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLP-QIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQ 299 (745)
Q Consensus 221 ~I~HyaG~V~Y~~~gflekN~D~l~~~~~~ll~~S~~~~~-~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~s 299 (745)
+|+||||+|.|+++||++||+|+++++++++|++|+++++ .+|..........+ ........+||+++|+.|
T Consensus 578 ~I~HyAG~V~Y~~~gfleKNrD~l~~~~~~ll~~S~~~~i~~Lf~~~~~~~~~~~-------~~~~~~~~~Tv~~~fk~s 650 (1052)
T 4anj_A 578 IIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDTK-------QKAGKLSFISVGNKFKTQ 650 (1052)
T ss_dssp EEEETTEEEEEECTTHHHHHBCCCCHHHHHHHHTCSCHHHHHTTCC-----------------------CCBHHHHHHHH
T ss_pred EEECCCCCEEEECCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC-------CCCCCCCCCCHHHHHHHH
T ss_conf 7876785288964772653643013999999995876878986120023565556-------788899876689999999
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999997125982466037899899887662799999742195422323302788754543599865013234567899
Q 004551 300 LFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQD 379 (745)
Q Consensus 300 L~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gile~i~i~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~~d 379 (745)
|+.||++|.+|.||||||||||+.+.|+.||..+|++||||+||||+|||+|.|||+|++|.+|+.||++|+|...+..|
T Consensus 651 L~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvLE~irI~r~Gyp~R~~f~eF~~RY~~L~~~~~~~~d 730 (1052)
T 4anj_A 651 LNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLD 730 (1052)
T ss_dssp HHHHHHHHHTSEEEEEEEECCCSSCCSSCCCHHHHHHHHHHHTHHHHHHHTTTCCCEEEEHHHHHHHHHTTSCSSGGGSC
T ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 99999997086897999878886578876788999999987457999999855798707199999999986855246899
Q ss_pred HHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 28999999887186986525202110000233442322223331006665545302310011011123466677777889
Q 004551 380 PLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGE 459 (745)
Q Consensus 380 ~~~~~~~ll~~~~~~~~~~~iG~tkVFlr~~~~~~Le~~r~~~l~aai~IQ~~~Rg~~~R~~~~~~r~a~i~IQs~~Rg~ 459 (745)
+++.|+.||..+++++++|++|+|||||+.+.++.||..|...+..++.+|..+|||++|++|++++.+++.||..+|++
T Consensus 731 ~k~~~~~iL~~l~l~~~~y~iG~TKVFlr~~~~~~LE~~r~~~~~~~~~~iq~~r~~l~r~~~~k~~~~a~~i~~~~r~~ 810 (1052)
T 4anj_A 731 PRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWLICSRWKKVQWCSLSVIKLKNKI 810 (1052)
T ss_dssp HHHHHHHHHHHTSCCGGGEEECSSEEEECTTCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999997694956699559779657189999999999889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999886-678999998775667999999899
Q 004551 460 KIRKEYALVL-QRHRAAVVIQRQIKSRVARQKLKN 493 (745)
Q Consensus 460 ~aRr~~~~~~-~~~~Aa~~IQ~~~R~~~~R~~~~~ 493 (745)
..|+.+.... +...++.-+++.||++..|++|..
T Consensus 811 ~~r~~~~~~w~~l~~~v~pll~~~~~~~~~r~~~~ 845 (1052)
T 4anj_A 811 KYRAEAVSKGEELFTGVVPILVELDGDVNGHKFSV 845 (1052)
T ss_dssp HHHHHHHHHHHHTTSSCEEEEEEEEEEETTEEEEE
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99997425999999753300898889987313410
No 5
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=1.00 E-value=1 Score=955.13 Aligned_cols=446 Identities=41% Similarity=0.708 Sum_probs=395.2
Q ss_pred CHHHHHHHCCCEEEEECCCCCEEE-CCHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCEEEECCCHHHHHHHHHHHHHH
Q ss_conf 924788662918997289882000-7968999999970999898998561326455582588507955437889999999
Q 004551 1 MLAAVLWLGNVSFTVIDNENHVEP-VADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKS 79 (745)
Q Consensus 1 ilAaIL~LGNi~F~~~~~~~~~~~-~~~~~l~~~a~LLGv~~~~L~~aL~~~~~~~~~e~i~~~l~~~~A~~~rdaLak~ 79 (745)
|||||||||||+|...+++ .+.+ .+.+.++.+|.||||++++|..+||++++.+++|.+++++++++|.++||+|||+
T Consensus 328 ilaaILhLGNi~F~~~~~~-~~~v~~~~~~l~~~a~LLgv~~~~L~~aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~ 406 (795)
T 1w7j_A 328 ILAGILHLGNVEFASRDSD-SCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKH 406 (795)
T ss_dssp HHHHHHHHHTCCCEEEETT-EEECCTTCHHHHHHHHHHTCCHHHHHHHHSEEEEECSSCEEEEECCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEECCCC-CEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCEECCCCCHHHHHHHHHHHHHH
T ss_conf 9999985067337634886-515308848999999996989999999742568984894033789989999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999999999810034579877662025631366544675723456742113467789999652322777642298532
Q 004551 80 IYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWA 159 (745)
Q Consensus 80 LY~~LF~wiV~~IN~~L~~~~~~~~~~I~iLDi~GFE~f~~NsfEQlciNyanE~Lq~~f~~~~f~~eqeey~~EgI~~~ 159 (745)
||++||+|||.+||.+|.+.. ....+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||.+|||+|+
T Consensus 407 lY~rLF~wlV~~IN~~l~~~~-~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~ 485 (795)
T 1w7j_A 407 IYANLFNWIVDHVNKALHSTV-KQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWT 485 (795)
T ss_dssp HHHHHHHHHHHHHHHHHCCSS-CCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHHHHHHCCCC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999889999999998616886-6660578513676555676779999877456899999998887999998885598621
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHC-CCCCCCCCCC--CCCEEEEECCCEEEEECCCH
Q ss_conf 24457957588853128775221430000799998078999998770-7999865789--99538983042027804202
Q 004551 160 KVDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHL-NSNPCFRGER--DKSFTVSHYAGEVIYDTTGF 236 (745)
Q Consensus 160 ~i~~~dn~~~ldlie~k~~Gll~lLdee~~~p~~td~~f~~kl~~~~-~~~~~~~~~~--~~~F~I~HyaG~V~Y~~~gf 236 (745)
.|+|.||++|||||+++ .|||++|||||++|++||.+|++||++.+ ++||+|..++ ...|+|+||||+|.|+++||
T Consensus 486 ~i~f~DN~~~idLie~~-~GIlslLDEec~~p~~tD~~f~~kl~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~gf 564 (795)
T 1w7j_A 486 LIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGF 564 (795)
T ss_dssp GCCCCCCHHHHHHHHST-TSHHHHHHHHHTSTTCCHHHHHHHHHHHHTTTCTTEECCTTCSSEEEEECSSCEEEEECTTH
T ss_pred CCCCCCCHHHHHHHHHC-CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEEEEECHHH
T ss_conf 24765649999999703-77787632221699987499999999986245876336877888437774425799803558
Q ss_pred HHHHCCCCCHHHHHHHHHCC-CCHH-HHHHHCCCCCC-C--C---------CCCCCCC--CCCCCCCCCCCHHHHHHHHH
Q ss_conf 04300203098999994248-8236-88651001259-9--9---------8668775--67998878754899999999
Q 004551 237 LEKNRDLLHLDSIELLSSCS-CHLP-QIFASNMLSQS-N--K---------PVVGPLY--KAGGADSQKLSVATKFKGQL 300 (745)
Q Consensus 237 lekN~D~l~~~~~~ll~~S~-~~~~-~lf~~~~~~~~-~--~---------~~~~~~~--~~~~~~~~~~tv~~~f~~sL 300 (745)
++||+|+++++++++|++|+ ++++ .+|.......+ . . ....+.+ ...+....++||+++|+.||
T Consensus 565 leKNkD~l~~~~~~ll~~S~~~~~v~~lf~~~~~~~~~~~~~~s~~~~~s~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL 644 (795)
T 1w7j_A 565 LEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSL 644 (795)
T ss_dssp HHHHHCCCCHHHHHHHHTCSSCSHHHHTTC---------------------------------------CCHHHHHHHHH
T ss_pred HHHCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 86403533199999997266437999973344333455554334455444334455456655455777872899999999
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCH
Q ss_conf 99999971259824660378998998876627999997421954223233027887545435998650132345678992
Q 004551 301 FQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDP 380 (745)
Q Consensus 301 ~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gile~i~i~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~~d~ 380 (745)
+.||++|.+|.||||||||||+.+.|+.||..+|++||||+||||++||+|.|||+|++|.+|+.||++|++...+..|+
T Consensus 645 ~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~~~~~~~d~ 724 (795)
T 1w7j_A 645 HLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDR 724 (795)
T ss_dssp HHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHTTHHHHHHHHHHSCCEEEEHHHHHHHHGGGSCGGGCCSCH
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCH
T ss_conf 99999986279867887578876781221711034455317708999999718874033999999999867765677787
Q ss_pred HHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 89999998871869865252021100002334423222233310-0666554530231001101112346
Q 004551 381 LSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLH-GILRVQSCFRGHQARLCLKELRRGI 449 (745)
Q Consensus 381 ~~~~~~ll~~~~~~~~~~~iG~tkVFlr~~~~~~Le~~r~~~l~-aai~IQ~~~Rg~~~R~~~~~~r~a~ 449 (745)
++.|+.+|..++++++.|++|+||||||.+.+..||..|...+. +++.||++||||++|++|++++.++
T Consensus 725 k~~~~~il~~~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~~~~~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 725 KQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHHCCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHCCCCCCEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 8999999998278953057768269974349999999999999999999999999999999999999743
No 6
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=1.00 E-value=1 Score=954.74 Aligned_cols=506 Identities=34% Similarity=0.541 Sum_probs=436.6
Q ss_pred CHHHHHHHCCCEEEEECCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 92478866291899728988200079689999999709998989985613264555825885079554378899999999
Q 004551 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSI 80 (745)
Q Consensus 1 ilAaIL~LGNi~F~~~~~~~~~~~~~~~~l~~~a~LLGv~~~~L~~aL~~~~~~~~~e~i~~~l~~~~A~~~rdaLak~L 80 (745)
|||||||||||+|...++++.+.+.+.+.+..+|.||||++++|..+||++++.+++|.+++++++++|.++||+|||+|
T Consensus 323 ilaaILhlGni~F~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~~~~~e~v~~~~~~~qa~~~rdalak~l 402 (995)
T 2ycu_A 323 MVSAVLQFGNIALKRERNTDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEALAKAT 402 (995)
T ss_dssp HHHHHHHGGGCCCEECSSSCCEECSCCHHHHHHHHHTTCCHHHHHHHHHSCEEESSSSEEECCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCEECCCCCHHHHHHHHHHHHHHH
T ss_conf 99999964364476237876523078699999999979899999997338488738832347999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999998100345798776620256313665446757234567421134677899996523227776422985322
Q 004551 81 YACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAK 160 (745)
Q Consensus 81 Y~~LF~wiV~~IN~~L~~~~~~~~~~I~iLDi~GFE~f~~NsfEQlciNyanE~Lq~~f~~~~f~~eqeey~~EgI~~~~ 160 (745)
|++||+|||.+||.+|.........+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||..|||+|+.
T Consensus 403 Y~~LF~wlV~~iN~~l~~~~~~~~~~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~ 482 (995)
T 2ycu_A 403 YERLFRWLVLRLNRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTF 482 (995)
T ss_dssp HHHHHHHHHHHHHHHHCCCSCCCSEEEEEEECCCBCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999726887776433887336430335434089998876678999999874018888987604887420
Q ss_pred CCC-CCCHHHHHHHHC--CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCC----CCCEEEEECCCEEEEEC
Q ss_conf 445-795758885312--87752214300007999980789999987707999865789----99538983042027804
Q 004551 161 VDF-EDNKDCLNLFEK--KPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGER----DKSFTVSHYAGEVIYDT 233 (745)
Q Consensus 161 i~~-~dn~~~ldlie~--k~~Gll~lLdee~~~p~~td~~f~~kl~~~~~~~~~~~~~~----~~~F~I~HyaG~V~Y~~ 233 (745)
|+| .||++|||||++ +|.|||++|||||++|++||.+|++||...+++||+|..++ +..|+|+||||+|.|++
T Consensus 483 i~f~~dn~~~idlie~~~~p~Gil~lLdee~~~p~~tD~~f~~kl~~~~~~~~~f~~~~~~~~~~~F~i~HyAG~V~Y~~ 562 (995)
T 2ycu_A 483 LDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKATDKSFVEKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVDYKA 562 (995)
T ss_dssp CCCSCCCHHHHHHHHCCSSSCCHHHHHHHSSSSTTCCHHHHHHHHHHHHTTSTTEECCCTTTCCSSEEEEETTEEEEECC
T ss_pred CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
T ss_conf 35566759999998266899846556578736999866999999998517887711688667888058777877735551
Q ss_pred CCHHHHHCCCCCHHHHHHHHHCCCCHH-HHHHHCCCCCCCCCCCC--CCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 202043002030989999942488236-88651001259998668--775-67998878754899999999999999712
Q 004551 234 TGFLEKNRDLLHLDSIELLSSCSCHLP-QIFASNMLSQSNKPVVG--PLY-KAGGADSQKLSVATKFKGQLFQLMQRLES 309 (745)
Q Consensus 234 ~gflekN~D~l~~~~~~ll~~S~~~~~-~lf~~~~~~~~~~~~~~--~~~-~~~~~~~~~~tv~~~f~~sL~~Lm~~L~~ 309 (745)
+||++||+|+++++++.+|++|+++++ .+|.......+.....+ +.. .........+||+++|+.||+.||++|.+
T Consensus 563 ~gfleKN~D~l~~~~~~ll~~S~~~~v~~lf~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~tv~~~fk~sL~~Lm~~L~~ 642 (995)
T 2ycu_A 563 NEWLMKNMDPLNDNVAALLHQSTDRLTAEIWKDVEGIVGLEQVSSLGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSN 642 (995)
T ss_dssp TTHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSSCCSSCSCCC-------------CCCSSCCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 16455415643399999998471789999840533334432123566666666767898774489999999999999982
Q ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCC--CCHHHHHHHH
Q ss_conf 59824660378998998876627999997421954223233027887545435998650132345678--9928999999
Q 004551 310 TTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSVAI 387 (745)
Q Consensus 310 t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gile~i~i~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~--~d~~~~~~~l 387 (745)
|.||||||||||+.+.|+.||..+|++||||+||||++||+|.|||+|++|.+|+.||++|.+..++. .|+++.|..+
T Consensus 643 t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~r~~~~~F~~RY~~L~~~~~~~~~~d~~~~~~~l 722 (995)
T 2ycu_A 643 TNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRILFQEFRQRYEILTPNAIPKGFMDGKQACEKM 722 (995)
T ss_dssp SEEEEEEEECCCSSCCTTCCCTTTHHHHHHHHTHHHHHHHHHHSCCEEEEHHHHHHHHGGGSTTTSCSCCCCSCCSCCCS
T ss_pred CCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf 59600363568864432660778878884144528879899746875365999999999708252556677779999999
Q ss_pred HHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHH------HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88718698652520211000023344232222333100------666554530231001101112346667777788999
Q 004551 388 LHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHG------ILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKI 461 (745)
Q Consensus 388 l~~~~~~~~~~~iG~tkVFlr~~~~~~Le~~r~~~l~a------ai~IQ~~~Rg~~~R~~~~~~r~a~i~IQs~~Rg~~a 461 (745)
|..++++++.|++|+|||||+.+.+..||..|.+.+.. +..++.|+|+..++..+...+.+++.||+.||++.+
T Consensus 723 l~~~~~~~~~~~~G~tkVF~r~~~~~~LE~~R~~~l~~~eYe~~a~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~ 802 (995)
T 2ycu_A 723 IQALELDPNLYRVGQSKIFFRAGVLAQLEEERASEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKE 802 (995)
T ss_dssp CCCSSEEESSEEEESSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCCHHHEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99759980122643468998222055489999997534467778889999999999999887776549999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHH-HHHHHHHHHHHH
Q ss_conf 9999988667899999877566799------999989999-889999999953
Q 004551 462 RKEYALVLQRHRAAVVIQRQIKSRV------ARQKLKNIK-YSSIMIQSVIRG 507 (745)
Q Consensus 462 Rr~~~~~~~~~~Aa~~IQ~~~R~~~------~R~~~~~~~-~a~v~iQs~~R~ 507 (745)
++...... .......||..++... .+..|..-. .....|+..|..
T Consensus 803 fr~~ekpp-~~~ek~rLeal~~~iqtkLrl~~~~~y~p~~gl~~~~L~~~W~~ 854 (995)
T 2ycu_A 803 YKKTEKPP-KGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSA 854 (995)
T ss_dssp HHHHTHHH-HHHHHHHHCSSSCCCCCSSCSSTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHH
T ss_conf 98875462-57789899999999999998606777896011019999999998
No 7
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=1.00 E-value=1 Score=929.79 Aligned_cols=479 Identities=36% Similarity=0.612 Sum_probs=413.2
Q ss_pred CHHHHHHHCCCEEEEECCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 92478866291899728988200079689999999709998989985613264555825885079554378899999999
Q 004551 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSI 80 (745)
Q Consensus 1 ilAaIL~LGNi~F~~~~~~~~~~~~~~~~l~~~a~LLGv~~~~L~~aL~~~~~~~~~e~i~~~l~~~~A~~~rdaLak~L 80 (745)
|||||||||||+|...++ +.+.+.+.+.+..+|.||||++++|..+||++++.+++|.+++++++++|.++||+|||+|
T Consensus 347 ilaaILhLGni~F~~~~~-~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~~~~~e~v~~~~~~~qa~~~rdalak~l 425 (1010)
T 1g8x_A 347 IIAGILHLGNIKFEKGAG-EGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKAL 425 (1010)
T ss_dssp HHHHHHHHTTCCCBCCTT-SSCBCSCCHHHHHHHHHHTSCHHHHHHHHHSCEEESSSSEEECCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEECCC-CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 999999746644773588-7642587599999999979899999998708677848816984899999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999998100345798776620256313665446757234567421134677899996523227776422985322
Q 004551 81 YACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAK 160 (745)
Q Consensus 81 Y~~LF~wiV~~IN~~L~~~~~~~~~~I~iLDi~GFE~f~~NsfEQlciNyanE~Lq~~f~~~~f~~eqeey~~EgI~~~~ 160 (745)
|++||+|||.+||.+|.+.. ...+||||||||||+|+.|||||||||||||+|||+||+++|+.||+||..|||+|+.
T Consensus 426 Y~~LF~wlV~~IN~~l~~~~--~~~~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~ 503 (1010)
T 1g8x_A 426 YGRLFLWLVKKINNVLCSER--KAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTF 503 (1010)
T ss_dssp HHHHHHHHHHHHHHHHCCSS--CSEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHCCCC--CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999998716787--6754563267653357767599999875358999999987658888886215888650
Q ss_pred CCCC-CCHHHHHHHHC-CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCC-CCCCCCCCC--CCCEEEEECCCEEEEECCC
Q ss_conf 4457-95758885312-87752214300007999980789999987707-999865789--9953898304202780420
Q 004551 161 VDFE-DNKDCLNLFEK-KPLGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTTG 235 (745)
Q Consensus 161 i~~~-dn~~~ldlie~-k~~Gll~lLdee~~~p~~td~~f~~kl~~~~~-~~~~~~~~~--~~~F~I~HyaG~V~Y~~~g 235 (745)
|+|. ||++|||||++ +|.|||++|||||++|++||.+|++|+.++++ +||+|..++ ...|+|+||||+|.|+++|
T Consensus 504 i~f~~dn~~~idlie~~~~~Gil~lLdee~~~p~~td~~f~~kl~~~~~~~~~~f~~~~~~~~~F~i~HyAG~V~Y~~~g 583 (1010)
T 1g8x_A 504 IDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQD 583 (1010)
T ss_dssp CCCCCCSHHHHHHHHCTTTTCHHHHHHHHTTSSSCCHHHHHHHHHHHHTTTCTTEECCTTCSSEEEEEETTEEEEEECTT
T ss_pred CCCCCCHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECEEEEEEECC
T ss_conf 56666769999998367998100001677479999738899999988367897844688889977776403278983368
Q ss_pred HHHHHCCCCCHHHHHHHHHCCCCHH-HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 2043002030989999942488236-886510012599986687756799887875489999999999999971259824
Q 004551 236 FLEKNRDLLHLDSIELLSSCSCHLP-QIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTTPHF 314 (745)
Q Consensus 236 flekN~D~l~~~~~~ll~~S~~~~~-~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~Lm~~L~~t~~hf 314 (745)
|++||+|+++++++.+|++|+++++ .+|.... ..+ + .+.....+||+++|+.||+.||++|.+|.|||
T Consensus 584 fleKN~D~l~~~~~~ll~~S~~~~~~~lf~~~~-~~~-~---------~~k~~~~~tv~~~fk~sL~~Lm~~L~~t~phf 652 (1010)
T 1g8x_A 584 WLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPN-IAS-R---------AKKGANFITVAAQYKEQLASLMATLETTNPHF 652 (1010)
T ss_dssp HHHHHHCCCCHHHHHHHTTCSCHHHHHHHHCHH-HHS-C---------CCCSSSCCCHHHHHHHHHHHHHHHHTTSEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCC-CCC-C---------CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 142035644499999998581789999840535-335-7---------87788787369999999999999997259743
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCC--CCHHHHHHHHHHHCC
Q ss_conf 660378998998876627999997421954223233027887545435998650132345678--992899999988718
Q 004551 315 IRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSVAILHQFN 392 (745)
Q Consensus 315 IrCIkPN~~~~p~~fd~~~V~~QLr~~gile~i~i~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~--~d~~~~~~~ll~~~~ 392 (745)
|||||||+.+.|+.||..+|++||||+||||++||+|.|||+|++|.+|+.||++|.+. ++. .|+++.|..+|..++
T Consensus 653 VRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~r~~~~~F~~RY~~L~~~-~~~~~~d~~~~~~~ll~~~~ 731 (1010)
T 1g8x_A 653 VRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPN-VPRDAEDSQKATDAVLKHLN 731 (1010)
T ss_dssp EEEECSCSSCCTTCCCHHHHHHHHHHSSHHHHHHHHTTSCCEEEEHHHHHHHHGGGSTT-CCTTCSCHHHHHHHHHHHTT
T ss_pred EEEECCCCCCCCCCCCHHHCCHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC-CCCCCCCHHHHHHHHHHHCC
T ss_conf 55346876555577573422225056765788879971886026099999999874777-77677888999999999749
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHH-HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 69865252021100002334423222233310066-65545302310011011123466677777889999999988667
Q 004551 393 ILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGIL-RVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQR 471 (745)
Q Consensus 393 ~~~~~~~iG~tkVFlr~~~~~~Le~~r~~~l~aai-~IQ~~~Rg~~~R~~~~~~r~a~i~IQs~~Rg~~aRr~~~~~~~~ 471 (745)
++++.|++|+|||||+.+.+..||..|...+..++ .||-..+ +..++.|+++..++..... .
T Consensus 732 ~~~~~~~~G~tkVF~r~~~l~~LE~~R~~~l~~~~~~iQY~~~--------------a~~L~~WIr~kqa~l~~r~---~ 794 (1010)
T 1g8x_A 732 IDPEQYRFGITKIFFRAGQLARIEEAREQRLGSEQTKSDYLKR--------------ANELVQWINDKQASLESRD---F 794 (1010)
T ss_dssp CCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHCCC---C
T ss_pred CCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHH---C
T ss_conf 9941055301554413331068899999899999999999999--------------9999999999999987621---1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Q ss_conf 8999998775667999999899--998899999999539999
Q 004551 472 HRAAVVIQRQIKSRVARQKLKN--IKYSSIMIQSVIRGWLVR 511 (745)
Q Consensus 472 ~~Aa~~IQ~~~R~~~~R~~~~~--~~~a~v~iQs~~R~~~aR 511 (745)
..+...||+.++.+...+.-.. .......+...+.....+
T Consensus 795 ~~sl~~IQ~ll~~f~~fk~~~kp~r~~ek~~Le~l~~~iqtk 836 (1010)
T 1g8x_A 795 GDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTK 836 (1010)
T ss_dssp CSSHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 245999999999999987503771677899999999999999
No 8
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=1.00 E-value=1 Score=912.58 Aligned_cols=428 Identities=34% Similarity=0.579 Sum_probs=384.2
Q ss_pred CHHHHHHHCCCEEEEECC-CCCEEE--CCHHHHHHHHHHCCCCHHHHHHHHCCCEEE-----ECCCEEEECCCHHHHHHH
Q ss_conf 924788662918997289-882000--796899999997099989899856132645-----558258850795543788
Q 004551 1 MLAAVLWLGNVSFTVIDN-ENHVEP--VADEGLITVAKLIGCDIGELKLALSTRKMR-----VGNDTIVQNLTLSQATDT 72 (745)
Q Consensus 1 ilAaIL~LGNi~F~~~~~-~~~~~~--~~~~~l~~~a~LLGv~~~~L~~aL~~~~~~-----~~~e~i~~~l~~~~A~~~ 72 (745)
|||||||||||+|...++ ++.+.+ .+.+.+..+|.||||++++|..+||++++. ++|+.+++++++++|.++
T Consensus 336 ilaaILhLGNi~F~~~~~~~~~~~v~~~~~~~l~~~a~LLgv~~~~L~~aL~~r~~~t~~g~~~ge~i~~~l~~~qA~~~ 415 (784)
T 2v26_A 336 VVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNA 415 (784)
T ss_dssp HHHHHHHHHTCCEEECTTTTSSEEECGGGHHHHHHHHHHHTCCHHHHHHHHHEEEC-----------CEEECCHHHHHHH
T ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCEEECCCCCCCCCEEEECCCHHHHHHH
T ss_conf 99999820552264136777763013688799999999849899999999742188533457788768615999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999981003457987766202563136654467572345674211346778999965232277764
Q 004551 73 RDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYI 152 (745)
Q Consensus 73 rdaLak~LY~~LF~wiV~~IN~~L~~~~~~~~~~I~iLDi~GFE~f~~NsfEQlciNyanE~Lq~~f~~~~f~~eqeey~ 152 (745)
||||||+||++||+|||.+||.+|... ....+||||||||||+|+.|||||||||||||+|||+|++|+|+.||+||.
T Consensus 416 rdalaK~lY~rLF~wlV~~IN~~l~~~--~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~F~~~~f~~EqeeY~ 493 (784)
T 2v26_A 416 RDALAKTVYSHLFDHVVNRVNQCFPFE--TSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQ 493 (784)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCS--CCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999761756--666444410267766677678999978777789999999745566788888
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCC------------CCCE
Q ss_conf 2298532244579575888531287752214300007999980789999987707999865789------------9953
Q 004551 153 QDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGER------------DKSF 220 (745)
Q Consensus 153 ~EgI~~~~i~~~dn~~~ldlie~k~~Gll~lLdee~~~p~~td~~f~~kl~~~~~~~~~~~~~~------------~~~F 220 (745)
+|||+|+.|+|.||++|+|||+++|.|||++|||||++|++||.+|++||++++++|++|..++ +..|
T Consensus 494 ~EgI~w~~i~f~DN~~~idLie~kp~GIlslLDEe~~~p~~tD~~f~~kl~~~~~~~~~~~~p~~~~~~~~~~~~~~~~F 573 (784)
T 2v26_A 494 KEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGF 573 (784)
T ss_dssp HTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHSSSCCHHHHHHHHHHHTTTCTTEECGGGCSSGGGTTSCTTSEE
T ss_pred HCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 60887432456570999999861156387889998468998758999999997278855035787654434334677853
Q ss_pred EEEECCCEEEEECCCHHHHHCCCCCHHHHHHHHHCCCCHH-HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 8983042027804202043002030989999942488236-886510012599986687756799887875489999999
Q 004551 221 TVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLP-QIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQ 299 (745)
Q Consensus 221 ~I~HyaG~V~Y~~~gflekN~D~l~~~~~~ll~~S~~~~~-~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~s 299 (745)
+|+||||+|.|+++||++||+|+++++++.+|++|+++++ .+|....... ..+ .+. ......+||+++|+.|
T Consensus 574 ~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~l~~Lf~~~~~~~-~~~-----~~~-~~~~~~~Tv~~~fk~s 646 (784)
T 2v26_A 574 IIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESSTNNN-KDT-----KQK-AGKLSFISVGNKFKTQ 646 (784)
T ss_dssp EEEETTEEEEEECTTHHHHTBCCCCHHHHHHHHTCSCHHHHHHC-----------------------CCCCBHHHHHHHH
T ss_pred EEEECCCCEEEECCCHHHHCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCC-CCC-----CCC-CCCCCCCCHHHHHHHH
T ss_conf 766147207662147787525233399999998460247999704312356-676-----667-7777556389999999
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999997125982466037899899887662799999742195422323302788754543599865013234567899
Q 004551 300 LFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQD 379 (745)
Q Consensus 300 L~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gile~i~i~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~~d 379 (745)
|+.||++|.+|.||||||||||+.+.|+.||..+|++||||+||||++||+|.|||+|++|.+|+.||++|++..++..|
T Consensus 647 L~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~~~~~~~d 726 (784)
T 2v26_A 647 LNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLD 726 (784)
T ss_dssp HHHHHHHHHTSEEEEEEEECCCSSCCSSCCCHHHHHHHHHHTTHHHHHHHHTSCCSEEEEHHHHHHHHGGGCCHHHHTSC
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999998705974589866786223586453253402663653799999985188554299999998523886567789
Q ss_pred HHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 2899999988718698652520211000023344232222333100666554530231
Q 004551 380 PLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQ 437 (745)
Q Consensus 380 ~~~~~~~ll~~~~~~~~~~~iG~tkVFlr~~~~~~Le~~r~~~l~aai~IQ~~~Rg~~ 437 (745)
+++.|+.+|..++++++.|++|+||||||.|.++.||..+.........|++.+|+|+
T Consensus 727 ~~~~~~~ll~~~~~~~~~~~~G~TKVF~r~g~~~~le~~~~~~~~~~~~ii~~v~~wl 784 (784)
T 2v26_A 727 PRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWL 784 (784)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECSSEEEECTTCHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHC
T ss_conf 8999999999759795757837930887488899999997528999999999998449
No 9
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=1.00 E-value=1 Score=912.46 Aligned_cols=418 Identities=39% Similarity=0.681 Sum_probs=380.8
Q ss_pred CHHHHHHHCCCEEEEECCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 92478866291899728988200079689999999709998989985613264555825885079554378899999999
Q 004551 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSI 80 (745)
Q Consensus 1 ilAaIL~LGNi~F~~~~~~~~~~~~~~~~l~~~a~LLGv~~~~L~~aL~~~~~~~~~e~i~~~l~~~~A~~~rdaLak~L 80 (745)
|||||||||||+|...++++.+.+.+.+.+..+|.||||++++|..+||++++.+++|.++++++++||.++||+|||+|
T Consensus 352 ilaaILhLGNi~F~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~aL~~~~i~~~~e~v~~~~~~~qA~~~rdalAK~l 431 (783)
T 4db1_A 352 LTGAIMHFGNMKFKLKQREEQAEPDGTEEADKSAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAV 431 (783)
T ss_dssp HHHHHHHHTTCCEEECTTSSCEEESCCHHHHHHHHHTTCCHHHHHHHHHSCC------CCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 99999941564565057776542588699999999849999999986405089858814860799999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999998100345798776620256313665446757234567421134677899996523227776422985322
Q 004551 81 YACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAK 160 (745)
Q Consensus 81 Y~~LF~wiV~~IN~~L~~~~~~~~~~I~iLDi~GFE~f~~NsfEQlciNyanE~Lq~~f~~~~f~~eqeey~~EgI~~~~ 160 (745)
|++||+|||.+||.+|.+. .....+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||.+|||+|+.
T Consensus 432 Y~rLF~wlV~~IN~~l~~~-~~~~~~IGvLDI~GFE~f~~NsFEQlCINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~ 510 (783)
T 4db1_A 432 YERMFNWMVTRINATLETK-QPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTF 510 (783)
T ss_dssp HHHHHHHHHHHHHHHHCCS-CCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHHHHHHHHCCCC-CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 9999999999998752899-888845999436642345647799999888789999999998767778776640777654
Q ss_pred CCCC-CCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHC-CCCCCCCCCC------CCCEEEEECCCEEEEE
Q ss_conf 4457-957588853128775221430000799998078999998770-7999865789------9953898304202780
Q 004551 161 VDFE-DNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHL-NSNPCFRGER------DKSFTVSHYAGEVIYD 232 (745)
Q Consensus 161 i~~~-dn~~~ldlie~k~~Gll~lLdee~~~p~~td~~f~~kl~~~~-~~~~~~~~~~------~~~F~I~HyaG~V~Y~ 232 (745)
|+|. ||++|+|||++ |.|||++|||||++|++||.+|++||++.+ ++||+|..++ ...|+|+||||+|.|+
T Consensus 511 i~f~~Dn~~~idLiek-p~Gil~lLDEec~~p~~tD~tf~~kl~~~~~~~~~~f~~~~~~k~~~~~~F~I~HyAG~V~Y~ 589 (783)
T 4db1_A 511 IDFGMDLQACIDLIEK-PMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFSLIHYAGIVDYN 589 (783)
T ss_dssp CCGGGGGHHHHHHHHS-TTSHHHHHCC-TTCTTCCHHHHHHHHHHHHTTTCTTEECCCC----C-CCEEEEETTEEEEEC
T ss_pred CCCCCCHHHHHHHHHC-CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEE
T ss_conf 5656771999999967-873676526876589897799999999985378977467887777779973886767766784
Q ss_pred CCCHHHHHCCCCCHHHHHHHHHCCCCHH-HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 4202043002030989999942488236-886510012599986687756799887875489999999999999971259
Q 004551 233 TTGFLEKNRDLLHLDSIELLSSCSCHLP-QIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTT 311 (745)
Q Consensus 233 ~~gflekN~D~l~~~~~~ll~~S~~~~~-~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~Lm~~L~~t~ 311 (745)
++||++||+|+++++++++|++|++.++ .+|.......+ +. ++........+..+||+++|+.||+.||++|.+|.
T Consensus 590 ~~gfleKNkD~l~~~~~~ll~~S~~~~v~~lf~~~~~~~~--~~-~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~ 666 (783)
T 4db1_A 590 IIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYAGADA--PI-EKGKGKAKKGSSFQTVSALHRENLNKLMTNLRSTH 666 (783)
T ss_dssp CTTHHHHHHCCCCHHHHHHHHTCSSHHHHHHHHSCC---------------------CCCHHHHHHHHHHHHHHHHHTSE
T ss_pred CCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCC--CC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 7684654545101889999997765899998641234544--44-57667777688776689999989999999987249
Q ss_pred CEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCC---CCHHHHHHHHH
Q ss_conf 824660378998998876627999997421954223233027887545435998650132345678---99289999998
Q 004551 312 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS---QDPLSVSVAIL 388 (745)
Q Consensus 312 ~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gile~i~i~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~---~d~~~~~~~ll 388 (745)
||||||||||+.+.|+.||..+|++||||+||||++||+|.|||+|++|.+|+.||++|.+..++. .|+++.|+.||
T Consensus 667 phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~~~~~~~~~~d~k~~~~~ll 746 (783)
T 4db1_A 667 PHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLL 746 (783)
T ss_dssp EEEEEEECCCSSCCTTCCCHHHHHHHHHHSSHHHHHHHHHTSCCEEEEC--------------------------CCHHH
T ss_pred CEEEEEECCCCCCCCCCCCCHHHHEECCCCCHHHHEEEHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf 77887157876568776465354000100373756020322788657089999999975944367777779999999999
Q ss_pred HHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87186986525202110000233442322223331
Q 004551 389 HQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTL 423 (745)
Q Consensus 389 ~~~~~~~~~~~iG~tkVFlr~~~~~~Le~~r~~~l 423 (745)
..++++++.|++|+||||||.|.++.||.+|.+.+
T Consensus 747 ~~~~~~~~~~~~G~TKVFlr~g~~~~LE~~R~~~l 781 (783)
T 4db1_A 747 SSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERL 781 (783)
T ss_dssp HSSSSCGGGEEECSSEEEECTTHHHHHHHHC----
T ss_pred HHCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHH
T ss_conf 96798957099878899977589999999999985
No 10
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=1.00 E-value=1 Score=904.68 Aligned_cols=412 Identities=41% Similarity=0.698 Sum_probs=380.4
Q ss_pred CHHHHHHHCCCEEEEECCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 92478866291899728988200079689999999709998989985613264555825885079554378899999999
Q 004551 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSI 80 (745)
Q Consensus 1 ilAaIL~LGNi~F~~~~~~~~~~~~~~~~l~~~a~LLGv~~~~L~~aL~~~~~~~~~e~i~~~l~~~~A~~~rdaLak~L 80 (745)
|||||||||||+|. .++++.+.+.+.+.+..+|.||||++++|..+||++++.+++|.+++++++++|.++||+|||+|
T Consensus 347 ilaaILhLGNi~F~-~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~l 425 (770)
T 1w9i_A 347 IIAGILHLGNIKFE-KGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKAL 425 (770)
T ss_dssp HHHHHHHHHTCCCE-ECSSSSEECSCCHHHHHHHHHHTCCHHHHHHHHHSCEEEETTEEEECCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEE-CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 99999962672574-27887344688699999999969899999998607678838806985889999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999998100345798776620256313665446757234567421134677899996523227776422985322
Q 004551 81 YACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAK 160 (745)
Q Consensus 81 Y~~LF~wiV~~IN~~L~~~~~~~~~~I~iLDi~GFE~f~~NsfEQlciNyanE~Lq~~f~~~~f~~eqeey~~EgI~~~~ 160 (745)
|++||+|||.+||.+|..... ..+||||||||||+|+.|||||||||||||+|||+|++|+|+.||+||..|||+|+.
T Consensus 426 Y~rLF~wlV~~IN~~l~~~~~--~~~IGvLDI~GFE~F~~NsFEQlCINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~ 503 (770)
T 1w9i_A 426 YGRLFLWLVKKINNVLCQERK--AYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTF 503 (770)
T ss_dssp HHHHHHHHHHHHHHHHCCSCC--SEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHCCCCC--CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 999999999999987158877--775663057653445647899999876378999999864027788876215877303
Q ss_pred CCCC-CCHHHHHHHHCC-CCCCCCCCHHHCCCCCCCCHHHHHHH-HHHCCCCCCCCCCCC--CCEEEEECCCEEEEECCC
Q ss_conf 4457-957588853128-77522143000079999807899999-877079998657899--953898304202780420
Q 004551 161 VDFE-DNKDCLNLFEKK-PLGLLSLLDEESTFPNGTDLTFANKL-KQHLNSNPCFRGERD--KSFTVSHYAGEVIYDTTG 235 (745)
Q Consensus 161 i~~~-dn~~~ldlie~k-~~Gll~lLdee~~~p~~td~~f~~kl-~~~~~~~~~~~~~~~--~~F~I~HyaG~V~Y~~~g 235 (745)
|+|. ||++|+|||+++ |.|||++|||||++|++||.+|++|| .+++++||+|..++. ..|+|+||||+|.|+++|
T Consensus 504 i~f~~dn~~~idLiek~~p~GilslLDEec~~p~~tD~~f~~kL~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~g 583 (770)
T 1w9i_A 504 IDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQD 583 (770)
T ss_dssp CCGGGGGHHHHHHHHCTTTTCHHHHHHHHHSSSSCCHHHHHHHHHHHHTTTSTTEECCSSCSSEEEEEETTEEEEEECTT
T ss_pred ECCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
T ss_conf 02356728999997278987022433666079998768999999998557897845788888855753147653242368
Q ss_pred HHHHHCCCCCHHHHHHHHHCCCCHH-HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 2043002030989999942488236-886510012599986687756799887875489999999999999971259824
Q 004551 236 FLEKNRDLLHLDSIELLSSCSCHLP-QIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTTPHF 314 (745)
Q Consensus 236 flekN~D~l~~~~~~ll~~S~~~~~-~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~Lm~~L~~t~~hf 314 (745)
|++||+|+++++++++|++|+++++ .+|....+. +.+ + .....+||+++|+.||+.||++|.+|.|||
T Consensus 584 fleKNkD~l~~~~~~ll~~S~~~~v~~Lf~~~~~~-~~~-------~---k~~~~~Tv~~~fk~sL~~Lm~~L~~t~phf 652 (770)
T 1w9i_A 584 WLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIA-SRA-------K---KGANFITVAAQYKEQLASLMATLETTNPHF 652 (770)
T ss_dssp HHHHHHCCCCHHHHHHHHTCSSTTHHHHHHCHHHH-CCC-------E---ETTEECCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCC-CCC-------C---CCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 34442572309999999856478999984055788-877-------7---778776236989999999999997149644
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCC--CCHHHHHHHHHHHCC
Q ss_conf 660378998998876627999997421954223233027887545435998650132345678--992899999988718
Q 004551 315 IRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSVAILHQFN 392 (745)
Q Consensus 315 IrCIkPN~~~~p~~fd~~~V~~QLr~~gile~i~i~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~--~d~~~~~~~ll~~~~ 392 (745)
|||||||+.+.|+.||..+|++||||+||||++||+|+|||+|++|.+|+.||++|++ .++. .|+++.|+.+|..++
T Consensus 653 VRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~-~~~~~~~d~k~~~~~lL~~~~ 731 (770)
T 1w9i_A 653 VRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAP-NVPRDAEDSQKATDAVLKHLN 731 (770)
T ss_dssp EEEECSCSSCCSSCCCHHHHHHHHHHSSHHHHHHHTTSSCCEEEESCC--------------------------------
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHHCC
T ss_conf 6645688644347617441086745632699999998568633529999999998561-234678898999999999639
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 69865252021100002334423222233310066
Q 004551 393 ILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGIL 427 (745)
Q Consensus 393 ~~~~~~~iG~tkVFlr~~~~~~Le~~r~~~l~aai 427 (745)
++++.|++|+|||||+.+.++.||..|.+.+..++
T Consensus 732 ~~~~~~~~G~TKVF~r~~~l~~LE~~R~~~l~~~~ 766 (770)
T 1w9i_A 732 IDPEQFRFGITKIFFRAGQLARIEEARELRGDYKD 766 (770)
T ss_dssp ----CCCCCSSEEEECTTTTTC-------------
T ss_pred CCCCCEEECCEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 99452776781189610599999999999999874
Done!