BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004552
(745 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L838|COG4_ARATH Conserved oligomeric Golgi complex subunit 4 OS=Arabidopsis
thaliana GN=COG4 PE=2 SV=1
Length = 738
Score = 1251 bits (3237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/726 (82%), Positives = 669/726 (92%), Gaps = 3/726 (0%)
Query: 21 ESSAVKFGTADALAYVRTLTDVGAMTRLLHECIAYQRALDVDLDSLLSQRTDLDKHLLQL 80
+SS VKFGT +AL YVR+LTDVGAMTRLLHECIAYQR+LD DLD+LLSQRT+LD++L+QL
Sbjct: 15 DSSTVKFGTPEALEYVRSLTDVGAMTRLLHECIAYQRSLDSDLDTLLSQRTELDRNLVQL 74
Query: 81 QKSAEVLDIVKADSDHMLSNVRSTSDLADQVSRKVRELDLAQSRVNDTLLRIDAIVDRNN 140
Q+SAE+LDIVKAD+DHML NVRST DLADQVS KVRELDLAQSRVN TL RIDAIV+R N
Sbjct: 75 QRSAEILDIVKADADHMLGNVRSTCDLADQVSGKVRELDLAQSRVNVTLSRIDAIVERGN 134
Query: 141 CLDGVKTALDEENFEAAAKFVQRFVEIDNKYKDSGSDQREQLLTAKKQLEGIVKKRVLAA 200
C++GVKTAL+ E++E+AAKFVQRF++ID +YKDSGSDQ EQL +K+QLEGI KK++LAA
Sbjct: 135 CIEGVKTALESEDYESAAKFVQRFLQIDLQYKDSGSDQSEQLHASKEQLEGIAKKKLLAA 194
Query: 201 VDQRDHGTILRFIKLYSPLGIEEEGLQVYVGYLKKVIGMRWRMEYDNLVELMEQSQDQNQ 260
+DQRDH TILRF++LYSPLG+E EGLQ+YVGYLKKVI +R RMEY+N+VELMEQ Q
Sbjct: 195 IDQRDHPTILRFVRLYSPLGMETEGLQLYVGYLKKVIALRGRMEYENVVELMEQGL--GQ 252
Query: 261 VNFVGCLTNLFKDIVLAIEENDEILRGLCGEDGIVYAICELQEECDSRGCLILKKYMEYR 320
VNFVGCLTNLFKDIV+AIEENDEILRGLCGEDG+ YAICELQEECD RG LILKKYM++R
Sbjct: 253 VNFVGCLTNLFKDIVMAIEENDEILRGLCGEDGVAYAICELQEECDLRGSLILKKYMDFR 312
Query: 321 KLGKLSAEIN-TQNKNLLNVGVSEGPDPREVELYLEEILSLMQLGEDYTEFMVSKIKSLS 379
KL L+++IN + N N+L G SEGPDPREVELY+EEILSLMQLGEDYTEFMVSKIKSL+
Sbjct: 313 KLAILASDINNSPNLNILPGGASEGPDPREVELYVEEILSLMQLGEDYTEFMVSKIKSLT 372
Query: 380 SVDPALVPRATKAFRSGSFSKVVQEITGFYVILEGFFMVENVRKAIRIDEYVPDSLTTSM 439
SVDP L+P ATKAFR+ SFSK +Q++T +YVILEGFFMVENVRKAIRIDE+VPDSLTTSM
Sbjct: 373 SVDPELLPTATKAFRNKSFSKAIQDVTRYYVILEGFFMVENVRKAIRIDEHVPDSLTTSM 432
Query: 440 VDDVFYVLQSCLRRAISTSNISSVIAVLSSASSLLSNEYQEALQQKTREPNLGAKLFLGG 499
VDDVFYVLQSCLRRAISTSNISSVIAVLS A SLL N+Y EALQQK REPNLGA+LFLGG
Sbjct: 433 VDDVFYVLQSCLRRAISTSNISSVIAVLSYAGSLLGNDYHEALQQKIREPNLGARLFLGG 492
Query: 500 VGVQKTGTEIATALNNMDVSSEYVLKLKHEIEEQCAEVFPTPADREKVKSCLSELGDLSK 559
+GV+ TGTEIATALNNMDVS EY+LKLKHEIEEQC EVFP PADRE++KSCLSELG+LS
Sbjct: 493 IGVENTGTEIATALNNMDVSCEYILKLKHEIEEQCTEVFPAPADRERIKSCLSELGELSS 552
Query: 560 MFKQILNMGMEQLVATVTPRIRPVLDSVATISYELSEAEYADNEVNDPWVQRLLHAVETN 619
FKQ+LN GMEQLVATVTPRIRPVLD+VATISYEL+E EYA+NEVNDPWVQRLLH+VETN
Sbjct: 553 TFKQLLNSGMEQLVATVTPRIRPVLDTVATISYELTETEYAENEVNDPWVQRLLHSVETN 612
Query: 620 AAWLQPLMTANNYDSFVHLIIDFIVKRLEVIMMQKKFSQLGGLQLDRDTRASVSHFSSMT 679
AAWLQPLMT+NNYDSF+HLIIDFIVKRLEVIMMQK+FSQLGGLQLDRDTRA VSHFS MT
Sbjct: 613 AAWLQPLMTSNNYDSFLHLIIDFIVKRLEVIMMQKRFSQLGGLQLDRDTRALVSHFSGMT 672
Query: 680 QRTVRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEA 739
QRTVRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWRLTPAEVRRVLGLRV+FKPE+
Sbjct: 673 QRTVRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWRLTPAEVRRVLGLRVEFKPES 732
Query: 740 IALLKL 745
IA LKL
Sbjct: 733 IAALKL 738
>sp|Q3MHG0|COG4_BOVIN Conserved oligomeric Golgi complex subunit 4 OS=Bos taurus GN=COG4
PE=2 SV=1
Length = 785
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 245/759 (32%), Positives = 420/759 (55%), Gaps = 55/759 (7%)
Query: 36 VRTLTDVGAMTRLLHECIAYQRALDVDLDSLLSQRTDLDKHLLQLQKSAEVLDIVKADSD 95
+R+LTD+ + + ++ ++ +LD+LL Q+ ++ ++ L + L +++ D+
Sbjct: 33 IRSLTDLQELEAVYERLCGEEKVVERELDALLEQQNTIESKMVTLHRMGPNLQLIEGDAK 92
Query: 96 HMLSNVRSTSDLADQVSRKVRELDLAQSRVNDTLLRIDAIVDRNNCLDGVKTALDEENFE 155
+ + T +LA+ VS KVR+LDLA++R+ + R D I+D C+DGV+TAL E++E
Sbjct: 93 QLAGMITFTCNLAENVSSKVRQLDLAKNRLYQAIQRADDILDLKFCMDGVQTALRNEDYE 152
Query: 156 AAAKFVQRFVEID------NKYKDSGS--DQREQLLT-AKKQLEGIVKKRVLAAVDQRDH 206
AA + R++ +D ++ GS D +LL A+++L+ IV ++ A + D
Sbjct: 153 QAAAHIHRYLCLDKSVIELSRQGKEGSMIDANLKLLQEAEQRLKAIVTEKFAVATKEGDL 212
Query: 207 GTILRFIKLYSPLGIEEEGLQVYVGYLKKVIGMRWRMEYDNLVELM--EQSQDQNQVNFV 264
+ RF K++ LG+ EEGL + YL K + + +NL+ ++ + S + V F
Sbjct: 213 PQVERFFKIFPLLGLHEEGLSKFSEYLCKQVASKAE---ENLLLVLGTDMSDRRAAVIFA 269
Query: 265 GCLTNLFKDIVLAIEENDEILRGLCGEDGIVYAICELQEECDSRGCLILKKYMEYRKLGK 324
LT LF+ I +E + I+ G + I LQ ECD + ++ K+++ R +
Sbjct: 270 DTLTLLFEGIARIVETHQPIVETYYGPGRLYTLIKYLQVECDRQVEKVVDKFIKQRDYRQ 329
Query: 325 LSAEINTQNKNLLNVGVSEGPDPREVELYLEEILSLMQLGEDYTEFMVSKIKSLSSVDPA 384
+ + NL+ SE +PRE++ L E+ + E Y F+ +I S V +
Sbjct: 330 QFRHVQS---NLMRNSTSEKIEPRELDPILTEVTLMNARSELYLRFLRKRISSDFEVGDS 386
Query: 385 LVPRATKAFRSGSFSKVV---------QEITGFYVILEGFFMVENVRKAIRIDEYVPDSL 435
+ K K++ QE+ G Y+ +E +FM E V KA+ +D Y L
Sbjct: 387 MASEEVKQEHQKCLDKLLNNCLLSCTMQELIGLYITMEEYFMRETVNKAVALDTYEKGQL 446
Query: 436 TTSMVDDVFYVLQSCLRRAISTSNISSVIAVLSSASSLLSNEYQEALQQKTRE--PNLGA 493
T+SMVDDVFY+++ C+ RA+S+S+I + A+++ A++ L +++++ L K R P
Sbjct: 447 TSSMVDDVFYIVKKCIGRALSSSSIDCLCAMINLATTELESDFRDVLCHKLRMGFPATTL 506
Query: 494 KLFLGGV-------------------GVQKTGT---EIATALNNMDVSSEYVLKLKHEIE 531
+ GV G++ T LNN++V SE + LK +E
Sbjct: 507 QDIQRGVTSAVSIMHSSLQQGKFDTKGIESTDEAKLSFLVTLNNVEVCSENISTLKKTLE 566
Query: 532 EQCAEVFPTPADRE----KVKSCLSELGDLSKMFKQILNMGMEQLVAT-VTPRIRPVLDS 586
C ++F E K SCLS+L +S F+ +L G+ +L +T + P+++P +++
Sbjct: 567 SDCTKLFSQGIGGEQAQAKFDSCLSDLAAVSGKFRDLLQEGLTELNSTAIKPQVQPWINT 626
Query: 587 VATISYELSEAEYADNEVNDPWVQRLLHAVETNAAWLQPLMTANNYDSFVHLIIDFIVKR 646
++S+ + E E++D E NDPWVQ+ + +E A + ++ YDS L+ +
Sbjct: 627 FLSVSHNIEEEEFSDYEANDPWVQQFILNLEQQMAEFKAGLSPVIYDSLTSLMTSLVAVE 686
Query: 647 LEVIMMQKKFSQLGGLQLDRDTRASVSHFSSMTQRTVRDKFARLTQMATILNLEKVSEIL 706
LE ++++ F++LGGLQ D++ R+ +++ +++T T+RDKFARL+QMATILNLE+V+EIL
Sbjct: 687 LEKVVLKSTFNRLGGLQFDKELRSLIAYLTTVTTWTIRDKFARLSQMATILNLERVTEIL 746
Query: 707 DFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIALLKL 745
D+WG NSGP+TWRLTPAEVR+VL LR+DF+ E I L+L
Sbjct: 747 DYWGANSGPLTWRLTPAEVRQVLALRIDFRSEDIKRLRL 785
>sp|Q5R7R6|COG4_PONAB Conserved oligomeric Golgi complex subunit 4 OS=Pongo abelii
GN=COG4 PE=2 SV=1
Length = 785
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 247/759 (32%), Positives = 421/759 (55%), Gaps = 55/759 (7%)
Query: 36 VRTLTDVGAMTRLLHECIAYQRALDVDLDSLLSQRTDLDKHLLQLQKSAEVLDIVKADSD 95
+R+LT++ + + ++ ++ +LD+LL Q+ ++ ++ L + L +++ D+
Sbjct: 33 IRSLTELQELETVYERLCGEEKVVERELDALLEQQNTIESKMVTLHRMGPNLQLIEGDAK 92
Query: 96 HMLSNVRSTSDLADQVSRKVRELDLAQSRVNDTLLRIDAIVDRNNCLDGVKTALDEENFE 155
+ + T +LA+ VS KVR+LDLA++R+ + R D I+D C+DGV+TAL E++E
Sbjct: 93 QLAGMITFTCNLAENVSSKVRQLDLAKNRLYQAIQRADDILDLKFCMDGVQTALRNEDYE 152
Query: 156 AAAKFVQRFVEID------NKYKDSGS--DQREQLLT-AKKQLEGIVKKRVLAAVDQRDH 206
AA + R++ +D ++ GS D +LL A+++L+ IV ++ A + D
Sbjct: 153 QAAAHIHRYLCLDKSVIELSRQGKEGSMIDANLKLLQEAEQRLKAIVAEKFAVATKEGDL 212
Query: 207 GTILRFIKLYSPLGIEEEGLQVYVGYLKKVIGMRWRMEYDNLVELM--EQSQDQNQVNFV 264
+ RF K++ LG+ EEGL+ + YL K + + +NL+ ++ + S + V F
Sbjct: 213 PQVERFFKIFPLLGLHEEGLRKFSEYLCKQVASKAE---ENLLMVLGTDMSDRRAAVIFA 269
Query: 265 GCLTNLFKDIVLAIEENDEILRGLCGEDGIVYAICELQEECDSRGCLILKKYMEYRKLGK 324
LT LF+ I +E + I+ G + I LQ ECD + ++ K+++ R +
Sbjct: 270 DTLTLLFEGIARIVETHQPIVETYYGPGRLYTLIKYLQVECDRQVEKVVDKFIKQRDYHQ 329
Query: 325 LSAEINTQNKNLLNVGVSEGPDPREVELYLEEILSLMQLGEDYTEFMVSKIKSLSSVDPA 384
+ QN NL+ +E +PRE++ L E+ + E Y F+ +I S V +
Sbjct: 330 QFRHV--QN-NLMRNSTTEKIEPRELDPILTEVTLMNARSELYLRFLKKRISSDFEVGDS 386
Query: 385 LVPRATKAFRSGSFSKVV---------QEITGFYVILEGFFMVENVRKAIRIDEYVPDSL 435
+ K K++ QE+ G YV +E +FM E V KA+ +D Y L
Sbjct: 387 MASEEVKQEHQKCLDKLLNNCLLSCTMQELIGLYVTMEEYFMRETVNKAVALDTYEKGQL 446
Query: 436 TTSMVDDVFYVLQSCLRRAISTSNISSVIAVLSSASSLLSNEYQEALQQKTRE--PNLGA 493
T+SMVDDVFY+++ C+ RA+S+S+I + A+++ A++ L +++++ L K R P
Sbjct: 447 TSSMVDDVFYIVKKCIGRALSSSSIDCLCAMINLATTELESDFRDVLCNKLRMGFPATTF 506
Query: 494 KLFLGGV-------------------GVQKT---GTEIATALNNMDVSSEYVLKLKHEIE 531
+ GV G++ T LNN++V SE + LK +E
Sbjct: 507 QDIQRGVTSAVNIMHSSLQQGKFDTKGIESTDEAKMSFLVTLNNVEVCSENISTLKKTLE 566
Query: 532 EQCAEVFPTPADRE----KVKSCLSELGDLSKMFKQILNMGMEQLVAT-VTPRIRPVLDS 586
C ++F E K SCLS+L +S F+ +L G+ +L +T + P+++P ++S
Sbjct: 567 SDCTKLFSQGIGGEQAQAKFDSCLSDLAAVSNKFRDLLQEGLTELNSTAIKPQVQPWINS 626
Query: 587 VATISYELSEAEYADNEVNDPWVQRLLHAVETNAAWLQPLMTANNYDSFVHLIIDFIVKR 646
++S+ + E E+ D E NDPWVQ+ + +E A + ++ YDS L+ +
Sbjct: 627 FFSVSHNIEEEEFNDYEANDPWVQQFILNLEQQMAEFKASLSPVIYDSLTGLMTSLVTVE 686
Query: 647 LEVIMMQKKFSQLGGLQLDRDTRASVSHFSSMTQRTVRDKFARLTQMATILNLEKVSEIL 706
LE ++++ F++LGGLQ D++ R+ +++ +++T T+RDKFARL+QMATILNLE+V+EIL
Sbjct: 687 LEKVVLKSTFNRLGGLQFDKELRSLIAYLTTVTTWTIRDKFARLSQMATILNLERVTEIL 746
Query: 707 DFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIALLKL 745
D+WG NSGP+TWRLTPAEVR+VL LR+DF+ E I L+L
Sbjct: 747 DYWGPNSGPLTWRLTPAEVRQVLALRIDFRSEDIKRLRL 785
>sp|Q8R1U1|COG4_MOUSE Conserved oligomeric Golgi complex subunit 4 OS=Mus musculus
GN=Cog4 PE=2 SV=1
Length = 785
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 244/759 (32%), Positives = 418/759 (55%), Gaps = 55/759 (7%)
Query: 36 VRTLTDVGAMTRLLHECIAYQRALDVDLDSLLSQRTDLDKHLLQLQKSAEVLDIVKADSD 95
+R+LT++ + + ++A++ +LD+LL Q+ ++ ++ L + L +++ D+
Sbjct: 33 IRSLTELQELEAVYERLCGEEKAVEKELDALLEQQNTIESKMVTLHRMGPSLQLIEGDAK 92
Query: 96 HMLSNVRSTSDLADQVSRKVRELDLAQSRVNDTLLRIDAIVDRNNCLDGVKTALDEENFE 155
+ + T LA+ VS KVR+LDLA++R+ + R D I+D C+DGV+TAL E++E
Sbjct: 93 QLAGMITFTCSLAENVSSKVRQLDLAKNRLYQAIQRADDILDLKFCMDGVQTALRNEDYE 152
Query: 156 AAAKFVQRFVEID------NKYKDSGS--DQREQLLT-AKKQLEGIVKKRVLAAVDQRDH 206
AA + R++ +D ++ GS D +LL A+++L+ IV ++ A + D
Sbjct: 153 QAAAHIHRYLCLDKSVIELSRQGKEGSMIDANLKLLQEAEQRLKAIVAEKFAIATKEGDL 212
Query: 207 GTILRFIKLYSPLGIEEEGLQVYVGYLKKVIGMRWRMEYDNLVELM--EQSQDQNQVNFV 264
+ RF K++ LG+ E+GL + YL K + + +NL+ ++ + S + V F
Sbjct: 213 PQVERFFKIFPLLGLHEDGLSKFSEYLCKQVASKAE---ENLLLVLGSDMSDRRAAVIFA 269
Query: 265 GCLTNLFKDIVLAIEENDEILRGLCGEDGIVYAICELQEECDSRGCLILKKYMEYRKLGK 324
LT LF+ I +E + I+ G + I LQ ECD++ ++ K+++ R +
Sbjct: 270 DTLTLLFEGIARIVETHQPIVETYYGPGRLFTLIKYLQVECDTQVEKVVNKFIKQRDYHQ 329
Query: 325 LSAEINTQNKNLLNVGVSEGPDPREVELYLEEILSLMQLGEDYTEFMVSKIKSLSSVDPA 384
+ NL+ +E +PRE++ L E+ + E Y F+ +I + V +
Sbjct: 330 ---QFRLVQSNLMRNSATEKIEPRELDPVLTEVTLMNARSELYLRFLRKRISADFEVGDS 386
Query: 385 LVPRATKAFRSGSFSKVV---------QEITGFYVILEGFFMVENVRKAIRIDEYVPDSL 435
+ K K++ QE+ GFY+ +E +FM E V KA+ +D Y L
Sbjct: 387 MASEEVKQEHQKCLDKLLNNCLLSCTMQELIGFYITMEEYFMRETVNKAVALDTYEKGQL 446
Query: 436 TTSMVDDVFYVLQSCLRRAISTSNISSVIAVLSSASSLLSNEYQEALQQKTRE--PNLGA 493
T+SMVDDVFY+++ C+ RA+S+SNI + A+++ A+ L ++++ L K R P
Sbjct: 447 TSSMVDDVFYIVKKCIGRALSSSNIDCLCAMINLATRELEADFRDVLCNKLRMGFPATTL 506
Query: 494 KLFLGGV-------------------GVQKTGT---EIATALNNMDVSSEYVLKLKHEIE 531
+ GV G++ T LNN++V SE + LK +E
Sbjct: 507 QDIQRGVTSAVNIMHSSLQQGKFDTKGIESTDEAKLSFLVTLNNVEVCSENISTLKKTLE 566
Query: 532 EQCAEVFPTPADRE----KVKSCLSELGDLSKMFKQILNMGMEQLVAT-VTPRIRPVLDS 586
C ++F E K SCLS+L +S F+ +L G+ +L ++ V P+++P +++
Sbjct: 567 SDCTKLFSQGIGGEQAQAKFDSCLSDLAAVSNKFRDLLQEGLAELNSSAVKPQVQPWINT 626
Query: 587 VATISYELSEAEYADNEVNDPWVQRLLHAVETNAAWLQPLMTANNYDSFVHLIIDFIVKR 646
++S+ + E E+ D E NDPWVQ+ + +E A + ++ YDS L+ +
Sbjct: 627 FLSVSHSIEEEEFNDYEANDPWVQQFILNLEQQMAEFKASLSPVIYDSLTGLMTSLVAVE 686
Query: 647 LEVIMMQKKFSQLGGLQLDRDTRASVSHFSSMTQRTVRDKFARLTQMATILNLEKVSEIL 706
LE ++++ F++LGGLQ D++ R+ +++ +++T T+RDKFARL+QMATILNLE+V+EIL
Sbjct: 687 LEKVVLKSTFNRLGGLQFDKELRSLIAYLTTVTTWTIRDKFARLSQMATILNLERVTEIL 746
Query: 707 DFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIALLKL 745
D+WG NSGP+TWRLTPAEVR+VL LR+DF+ E I L+L
Sbjct: 747 DYWGANSGPLTWRLTPAEVRQVLALRIDFRNEDIKRLRL 785
>sp|Q9H9E3|COG4_HUMAN Conserved oligomeric Golgi complex subunit 4 OS=Homo sapiens
GN=COG4 PE=1 SV=3
Length = 785
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 247/759 (32%), Positives = 420/759 (55%), Gaps = 55/759 (7%)
Query: 36 VRTLTDVGAMTRLLHECIAYQRALDVDLDSLLSQRTDLDKHLLQLQKSAEVLDIVKADSD 95
+R+LT++ + + ++ ++ +LD+LL Q+ ++ ++ L + L +++ D+
Sbjct: 33 IRSLTELQELEAVYERLCGEEKVVERELDALLEQQNTIESKMVTLHRMGPNLQLIEGDAK 92
Query: 96 HMLSNVRSTSDLADQVSRKVRELDLAQSRVNDTLLRIDAIVDRNNCLDGVKTALDEENFE 155
+ + T +LA+ VS KVR+LDLA++R+ + R D I+D C+DGV+TAL E++E
Sbjct: 93 QLAGMITFTCNLAENVSSKVRQLDLAKNRLYQAIQRADDILDLKFCMDGVQTALRSEDYE 152
Query: 156 AAAKFVQRFVEID------NKYKDSGS--DQREQLLT-AKKQLEGIVKKRVLAAVDQRDH 206
AA R++ +D ++ GS D +LL A+++L+ IV ++ A + D
Sbjct: 153 QAAAHTHRYLCLDKSVIELSRQGKEGSMIDANLKLLQEAEQRLKAIVAEKFAIATKEGDL 212
Query: 207 GTILRFIKLYSPLGIEEEGLQVYVGYLKKVIGMRWRMEYDNLVELM--EQSQDQNQVNFV 264
+ RF K++ LG+ EEGL+ + YL K + + +NL+ ++ + S + V F
Sbjct: 213 PQVERFFKIFPLLGLHEEGLRKFSEYLCKQVASKAE---ENLLMVLGTDMSDRRAAVIFA 269
Query: 265 GCLTNLFKDIVLAIEENDEILRGLCGEDGIVYAICELQEECDSRGCLILKKYMEYRKLGK 324
LT LF+ I +E + I+ G + I LQ ECD + ++ K+++ R +
Sbjct: 270 DTLTLLFEGIARIVETHQPIVETYYGPGRLYTLIKYLQVECDRQVEKVVDKFIKQRDYHQ 329
Query: 325 LSAEINTQNKNLLNVGVSEGPDPREVELYLEEILSLMQLGEDYTEFMVSKIKSLSSVDPA 384
+ QN NL+ +E +PRE++ L E+ + E Y F+ +I S V +
Sbjct: 330 QFRHV--QN-NLMRNSTTEKIEPRELDPILTEVTLMNARSELYLRFLKKRISSDFEVGDS 386
Query: 385 LVPRATKAFRSGSFSKVV---------QEITGFYVILEGFFMVENVRKAIRIDEYVPDSL 435
+ K K++ QE+ G YV +E +FM E V KA+ +D Y L
Sbjct: 387 MASEEVKQEHQKCLDKLLNNCLLSCTMQELIGLYVTMEEYFMRETVNKAVALDTYEKGQL 446
Query: 436 TTSMVDDVFYVLQSCLRRAISTSNISSVIAVLSSASSLLSNEYQEALQQKTRE--PNLGA 493
T+SMVDDVFY+++ C+ RA+S+S+I + A+++ A++ L +++++ L K R P
Sbjct: 447 TSSMVDDVFYIVKKCIGRALSSSSIDCLCAMINLATTELESDFRDVLCNKLRMGFPATTF 506
Query: 494 KLFLGGV-------------------GVQKT---GTEIATALNNMDVSSEYVLKLKHEIE 531
+ GV G++ T LNN++V SE + LK +E
Sbjct: 507 QDIQRGVTSAVNIMHSSLQQGKFDTKGIESTDEAKMSFLVTLNNVEVCSENISTLKKTLE 566
Query: 532 EQCAEVFPTPADRE----KVKSCLSELGDLSKMFKQILNMGMEQLVAT-VTPRIRPVLDS 586
C ++F E K SCLS+L +S F+ +L G+ +L +T + P+++P ++S
Sbjct: 567 SDCTKLFSQGIGGEQAQAKFDSCLSDLAAVSNKFRDLLQEGLTELNSTAIKPQVQPWINS 626
Query: 587 VATISYELSEAEYADNEVNDPWVQRLLHAVETNAAWLQPLMTANNYDSFVHLIIDFIVKR 646
++S+ + E E+ D E NDPWVQ+ + +E A + ++ YDS L+ +
Sbjct: 627 FFSVSHNIEEEEFNDYEANDPWVQQFILNLEQQMAEFKASLSPVIYDSLTGLMTSLVAVE 686
Query: 647 LEVIMMQKKFSQLGGLQLDRDTRASVSHFSSMTQRTVRDKFARLTQMATILNLEKVSEIL 706
LE ++++ F++LGGLQ D++ R+ +++ +++T T+RDKFARL+QMATILNLE+V+EIL
Sbjct: 687 LEKVVLKSTFNRLGGLQFDKELRSLIAYLTTVTTWTIRDKFARLSQMATILNLERVTEIL 746
Query: 707 DFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIALLKL 745
D+WG NSGP+TWRLTPAEVR+VL LR+DF+ E I L+L
Sbjct: 747 DYWGPNSGPLTWRLTPAEVRQVLALRIDFRSEDIKRLRL 785
>sp|Q95TN4|COG4_DROME Conserved oligomeric Golgi complex subunit 4 OS=Drosophila
melanogaster GN=CG7456 PE=1 SV=1
Length = 776
Score = 291 bits (745), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 208/742 (28%), Positives = 388/742 (52%), Gaps = 60/742 (8%)
Query: 63 LDSLLSQRTDLDKHLLQLQKSAEVLDIVKADSDHMLSNVRSTSDLADQVSRKVRELDLAQ 122
L+SLL+++ ++ + + +S +L V +DS+ + + +T+ LA+ VS KVR LDLA+
Sbjct: 36 LESLLAKQCQIEAKMSGIGRSLSLLHTVDSDSNKLNDQIVNTAQLAESVSAKVRRLDLAR 95
Query: 123 SRVNDTLLRIDAIVDRNNCLDGVKTALDEENFEAAAKFVQRFVEIDNKYKDSGSDQREQL 182
R ++ R+ ++D + C GV A+ EE++E +A + RF+ +D + +D +
Sbjct: 96 CRASECQQRVHDLIDLHLCSQGVVKAIGEEDYEKSATHIARFLAMDQQLLRRTADDVQGS 155
Query: 183 LT----AKKQLEG-------IVKKRVLAAVDQRDHGTILRFIKLYSPLGIEEEGLQVYVG 231
+T A K LE ++ KR AV D ++ RF K++ +G G++ +
Sbjct: 156 ITSVSDAVKTLEDATEKTRVLIAKRFDEAVKADDLASVERFFKIFPLVGCHRTGIEKFSL 215
Query: 232 YLKKVIGMRWRMEYDNLVELMEQSQDQNQVNFVGCLTNLFKDIVLAIEENDEILRGLCGE 291
Y+ + + + + E N ++ +++ + Q+ + LT + ++ +E N I+ G+
Sbjct: 216 YICQKLANKAQKELRNAQDIA-KAESRLQLAYADRLTAILENFARVVEVNQPIIEAFYGQ 274
Query: 292 --DGIVYAICELQEECDSRGCLILKKYMEYRKLGKLSAEIN--TQ---------NKNLLN 338
++ + LQ ECD+ +L ++ + R++ S ++N TQ + ++
Sbjct: 275 ASSSLIDMVSILQHECDTEVKNLLMEFNKNRQIQYRSKQVNESTQRSAGGGNLGSNSIQA 334
Query: 339 VGVSEGP--------DPREVELYLEEILSLMQLGEDYTEFMVSKIK-SLSSVDPA----- 384
+G P +P+E++ + EI + E Y FM +++ + + P
Sbjct: 335 LGHYRKPSGGSVDKLNPKEIDAIIAEITVMHARVELYFRFMRRRLQVHVETCVPEKEQFD 394
Query: 385 LVPRATKAFRSGSFSKVVQEITGFYVILEGFFMVENVRKAIRIDEYVPDSLTTSMVDDVF 444
++ R K ++ + +QEI Y++LE +FM E+V KAI +D Y +SMVDDVF
Sbjct: 395 IMERYEKIMKNSDLRRQMQEILSTYLLLERYFMEESVLKAIGLDTYESGQQCSSMVDDVF 454
Query: 445 YVLQSCLRRAISTSNISSVIAVLSSASSLLSNEYQEALQQ--KTREPNLGAKLFLGGVGV 502
++L+ +RRA++T +I+ AV+++ ++ L ++ AL+ K+ P+ L +
Sbjct: 455 FILRKSIRRALTTQSINGTCAVINNVAACLDGDFVNALKAPLKSGYPSGYIDLAQAYNAI 514
Query: 503 Q--------------KTGTEIATALNNMDVSSEYVLKLKHEIEEQCAEVFP--TPADREK 546
Q + LNN D+S+EY+ L +E++ A FP T +R+
Sbjct: 515 QTSLQQGKLHSSDADRGRANFLVQLNNADISTEYIETLCQTMEQEIAGTFPQTTQVERQM 574
Query: 547 VKSCLSELGDLSKMFKQILNMGMEQLVATV-TPRIRPVLDSVATISYELSEAEYADNEVN 605
+ SCL+EL + K ++ GM+QL ++V PR+ P ++ S+ L+E E A E
Sbjct: 575 LDSCLTELKAVRDALKATVDFGMQQLRSSVIKPRLNPWINQFLNYSHNLNEEELAAYEAG 634
Query: 606 DPWVQRLLHAVETNAAWLQPLMTANNYDSFVHLIIDFIVKRLEVIMMQKKFSQLGGLQLD 665
+ +VQ + ++ + ++ NYD+ V ++ + +LE + + F++LGGL LD
Sbjct: 635 ETFVQFFIVQLDGLLNSFKNSLSPRNYDALVSILATEVTIQLERAIKKISFNRLGGLVLD 694
Query: 666 RDTRASVSHFSSMTQRTVRDKFARLTQMATILNLEKVSEILDFWG-ENSGPM-TWRLTPA 723
++ RA S+ + T +VRDK R++Q+AT+LNL+K++E+ ++W EN+ M +W LTP
Sbjct: 695 QEVRALGSYLTGATSWSVRDKMTRISQIATLLNLDKITELSEYWNPENNKEMSSWHLTPN 754
Query: 724 EVRRVLGLRVDFKPEAIALLKL 745
EVR L LR DF+ E I L+L
Sbjct: 755 EVRTFLTLRNDFRIEDIKRLQL 776
>sp|Q95XZ0|COG4_CAEEL Conserved oligomeric Golgi complex subunit 4 OS=Caenorhabditis
elegans GN=cogc-4 PE=3 SV=1
Length = 801
Score = 212 bits (540), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 187/728 (25%), Positives = 349/728 (47%), Gaps = 74/728 (10%)
Query: 71 TDLDKHLLQLQKSAEVLDIVKADSDHMLSNVRSTSDLADQVSRKVRELDLAQSRVNDTLL 130
T L+ H+L ++ SA+ + S +++ S LAD +S +V LD+A++RV L
Sbjct: 86 TRLNNHMLVVENSAK----------QLTSALKNISVLADTISGRVSALDVAKTRVVGCLQ 135
Query: 131 RIDAIVDRNNCLDGVKTALDEENFEAAAKFVQRFVEIDN--------KYKDSGSDQR--- 179
+ D C +G+ A+ E+FE A++ + RF+ +D K KD+ R
Sbjct: 136 LAGDMRDLGVCAEGIDDAIRSEDFETASQHIHRFLTLDQAVFQIREFKQKDATDSIRHSY 195
Query: 180 EQLLTAKKQLEGIVKKRVLAAVDQRDHGTILRFIKLYSPLGIEEEGLQVYVGYLKKVIGM 239
E L +AK++L I+K R+ +V + D + RFIK++ + +EGLQ Y +L + I
Sbjct: 196 EVLSSAKERLSKILKSRLTESVQKGDVAEMQRFIKMFPLIHEPDEGLQRYSVFLNQKID- 254
Query: 240 RWRMEYDNLVELMEQSQDQNQVN--FVGCLTNLFKDIVLAIEENDEILRGLCGEDGIVYA 297
++ DNL + D N+ N + L F+ + IE N +L G + ++
Sbjct: 255 --KLAEDNLAIMKAGGTDDNRRNVLYADTLFMFFEGVAEIIESNLPVLEHSYGLEKLLDF 312
Query: 298 ICELQEECDSRGCLILKKYMEYRKL---GKLSAEINTQNKNLLNVGVSEGPDPREVELYL 354
+ LQ D + +++ R+L +L ++ Q K V + PDP E++
Sbjct: 313 MFILQARIDEFFRRLHEEFDTRRRLSHFNRLVDDVIHQKKAA--EAVEDAPDPMEIDAIA 370
Query: 355 EEILSLMQLGEDYTEFMVSKIKSLSSV-----------------------DPALVPRATK 391
EI + E Y F+ +I + A + +
Sbjct: 371 SEICMMNTSAEMYWRFVSRRIGKNEVIRSPSGDGDDEENEEARQERHRLRKEAKEQKMDQ 430
Query: 392 AFRSGSFSKVVQEITGFYVILEGFFMVENVRKAIRID-EYVPDSLTTSMVDDVFYVLQSC 450
+QE+ G Y +LE F+M+++V+KAI+ D + LT+S+VDDV ++++
Sbjct: 431 LLNRSRVGTKMQELIGNYCLLEHFYMLKSVQKAIKSDVKEDAGGLTSSIVDDVVFIIRKS 490
Query: 451 LRRAISTSNISSVIAVLSSASSLLSNEYQEALQQKTRE-----PNLGAKLFLG---GVGV 502
+RRA + N+ SV A +++A++L+ L+Q ++ N ++ F G V
Sbjct: 491 IRRAAGSGNVDSVCATINNATALIDTVVHGHLRQSIQQGYVTSSNFASEAFTAYQQGKPV 550
Query: 503 QKTG----TEIATALNNMDVSSEYVLKLKHEIEEQCAEVFPTPADREKVKSCLSELGDLS 558
++ + ALNN SE +++L+ + + A V ++ K++ +++ + +
Sbjct: 551 KEAADAQKEQFLLALNNSAKLSELLIELQKGLITEWAGVKRPDVEKNKLEHSTTQIEESA 610
Query: 559 KMFKQILNMGMEQLVATV-TPRIRPVLDSVATISYELSEAEYADNEVNDPWVQRLLHAVE 617
K + G+E+L + +I+ D I +++ + E +DP++++ L ++
Sbjct: 611 KKLASLAKHGVEELFKSAFKNKIKQGADPYQEIDRQMTMQDVEYYEAHDPFMEQFLAQID 670
Query: 618 TNAAWLQPLMTANNYDSFVHLIIDFIVKRLEVIMMQKKFSQLGGLQLDRDTRASVSHFSS 677
+PL+ A+NY + + L I +++E + + +F++ G LQLDR+ R ++ ++
Sbjct: 671 RLLVENEPLLFADNYQTLLLLTSSEIARQIEQSLAKCQFNRYGALQLDREYRQICAYLTN 730
Query: 678 MTQRTVRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWR-----LTPAEVRRVLGLR 732
+ + R+K RL Q+ ++LN+E + E ++ W NS MT LT EVR+VL LR
Sbjct: 731 VAGWSAREKVGRLGQIVSLLNVETIDEAMEVW-HNSKAMTSSATIRTLTLPEVRKVLALR 789
Query: 733 VDFKPEAI 740
DF AI
Sbjct: 790 ADFPTVAI 797
>sp|Q55FT5|COG4_DICDI Conserved oligomeric Golgi complex subunit 4 OS=Dictyostelium
discoideum GN=cog4 PE=3 SV=1
Length = 911
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 129/204 (63%), Gaps = 1/204 (0%)
Query: 543 DREKVKSCLSELGDLSKMFKQILNMGMEQLVATVTPRIRPVLDSVATISYELSEAEYADN 602
DR++V +E + SK F +IL +E L +V PR++ VL+ ++YE+++ EY +N
Sbjct: 707 DRDQVNILSNEFLNCSKSFNKILQEEIESLFKSVQPRLKNVLNQFTLVNYEINQLEYDNN 766
Query: 603 EVNDPWVQRLLHAVETNAAWLQPLMTANNYDSFVHLIIDFIVKRLE-VIMMQKKFSQLGG 661
++NDP+V + + Q ++ NYD VH I FI+K++E + + QKKF+ LGG
Sbjct: 767 DINDPFVLQFTLEISHFFKPFQEHLSNTNYDYLVHQTIQFILKKIEGITIQQKKFTLLGG 826
Query: 662 LQLDRDTRASVSHFSSMTQRTVRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWRLT 721
LQ +D RA ++F+ ++Q T+RDKF++L Q+++ L LE +SE+ D W EN TW+L+
Sbjct: 827 LQFGKDLRAISTYFTKISQSTIRDKFSKLNQISSFLILESISEVEDHWNENRNSPTWKLS 886
Query: 722 PAEVRRVLGLRVDFKPEAIALLKL 745
+EV+++L R+DF + I LK
Sbjct: 887 SSEVQKILMTRIDFNHDQILKLKF 910
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 134/623 (21%), Positives = 262/623 (42%), Gaps = 132/623 (21%)
Query: 47 RLLHECIAYQRALDVDLDSLLSQRTDLDKHLLQLQKS-AEVLDIVKADSDHMLSNVRSTS 105
+ L I+ +A++++L + + DL+ + E L + S+ + + + ST
Sbjct: 22 KYLQNLISRDKAIEINLKQHIKLKDDLEIQMESFDNEIPEYLTLSLKKSNELNNRISSTC 81
Query: 106 DLADQVSRKVRELDLAQSRVNDTLLRIDAIVDRNNCLDGVKTALDEENFEAAAKFVQRFV 165
LA+ +S KV++LD + R+ DTL ++D I+D NC++GV+ ++++E++E AA + R++
Sbjct: 82 QLAENLSSKVKKLDNIRERIKDTLKKVDDIIDLKNCIEGVQISIEKEDYEGAAFHINRYL 141
Query: 166 EIDNKYKDSGSDQREQLLTAKKQLEGIVKKRVLAAVDQRDHGTILRFIKLYSPLGIEEEG 225
ID + S E+L A+K+L +++ + ++ D +LRF LY PL EG
Sbjct: 142 SIDKSVLEDNSS--EKLSIAEKKLLSMIESKYQQSLQDNDQKQVLRFCILYVPLEKPLEG 199
Query: 226 LQVYVGYLKKVIGMRWRM--EYDNLVELMEQSQDQNQVNFVGCLTNLFKDIVLAIEENDE 283
+ Y YLK M Y N ++ + ++ V +T +F+ IE++
Sbjct: 200 IDKYCNYLKNQSKKLDAMITHYRNYIQ---SPKTIKPISAVSVITKIFEHFAAIIEDDLP 256
Query: 284 ILRGLCGEDGIVYAICELQEECDSRGCLILKKYMEYRKLGKLSAEINTQNKNL------- 336
I++ G + I + ++CD + + + + K +I + L
Sbjct: 257 IIKSEFGVLHCPHFILNITQQCDYYSSKVYDSFNDQFQTNKNVNDILVYKQQLEKSQQSI 316
Query: 337 ---------LNVGVSEGPDPREVELYLEEILSLMQLGEDYTEFMV--------------- 372
VSE DPR +L+E + + + Y ++++
Sbjct: 317 QDSGSGSGGGGGKVSEKIDPRNFAQFLDETSMISKATKFYEKYLIRKEHLIKSDIYQYYS 376
Query: 373 ----SKIKSLSSVDPALVPRA--------------------------------------- 389
KI+ L+S+ ++ +
Sbjct: 377 KLEKEKIEKLNSIKSLIITNSRNQQLQQLPQPQQLQQQQQYQQQLQTQENKENELLKKLT 436
Query: 390 ---TKAFRSGSFSKVVQE----ITGFYVILEGFFMVENVRKAIRIDE------------- 429
K + +S V ++ + G Y++LE +FMVE+V KAI++D
Sbjct: 437 QEKDKQMKQTIYSNVTKQKMNQLLGNYILLEEYFMVESVNKAIQMDSLQSLDFENNINSS 496
Query: 430 ------------------------YVPDSLTTSMVDDVFYVLQSCLRRAISTSNISSVIA 465
S +M+D +F+VLQ L+RAI + +I ++
Sbjct: 497 NSNSSSVSGSGIGGSNTLSSSNSQQSQQSTDNTMIDFIFFVLQKSLQRAIDSHSIQTLNV 556
Query: 466 VLSSASSLLSNEYQEALQQKTREPNLGAKLFLGGVGVQKTGTEIATALNNMDVSSEYVLK 525
+ + +LS + ++ L++ RE + + V + + LNN++ SSEY+++
Sbjct: 557 ICNRLCRILS-QTRDNLKRIFREYIIRS----SSKSVMDYQSSLQ-VLNNLETSSEYIIR 610
Query: 526 LKHEIEEQCAEVFPTPADREKVK 548
LK E + +C +++P EK K
Sbjct: 611 LKKEFDSKCLKIYPIYKLDEKSK 633
>sp|O74990|COG4_SCHPO Conserved oligomeric Golgi complex subunit 4 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cog4 PE=3 SV=1
Length = 738
Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 147/704 (20%), Positives = 293/704 (41%), Gaps = 54/704 (7%)
Query: 40 TDVGAMTRLLHECIAYQRALDVDLDSLLSQRTDLDKHLLQLQKSAEVLDIVKADSDHMLS 99
TD+ + + H+ + D L+ LLS +K ++ AE L + + +
Sbjct: 9 TDISQIKQRFHDLQVESQRTDEKLERLLSDAQPTEKFNSLIKNMAERLVLFVGQIEELKD 68
Query: 100 NVRSTSDLADQVSRKVRELDLAQSRVNDTLLRIDAIVDRNNCLDGVKTALDEENFEAAAK 159
+T+ ++++V +++ +D Q+R+ + LL + + D CL + A+ + +E AA
Sbjct: 69 AFCNTTIVSEEVIERIKSVDREQNRIKECLLFVRQVRDFKECLQDLNRAMHHQQWEKAAD 128
Query: 160 FVQRFVE-----IDNKYKDSGSDQREQLLTAKKQLEGIVK-------KRVLAAVDQRDHG 207
V R I+ K+ + EQ L L+ I + + A +D
Sbjct: 129 LVHRASSTSPAIIEGKFAHAVVPTAEQPLAPMDTLKEITESLHTLFWREFHKAARNQDQK 188
Query: 208 TILRFIKLYSPLGIEEEGLQVYVGYLKKVIGMRWRMEYDNLVELMEQSQDQNQVNFVGCL 267
I R+ KL+ +G E+EGL+ Y + +I + R D + + F
Sbjct: 189 EITRYFKLFPLIGKEKEGLEAYWHFFGGIIASKARATLD--------EPPTHALFFAQAF 240
Query: 268 TNLFKDIVLAIEENDEILRGLCGEDGIVYAICELQEECDSRGCLILKKYMEYRKLGKLSA 327
T L + + I + +++ + I +LQ +CD +G +I+ + R++ L +
Sbjct: 241 TGLVEHVASIIRAHTPLVQKYYKAKNTITVIEKLQGDCDRQGSIIVNTMFDVRRIDNLVS 300
Query: 328 EINTQNKNLLNVGVSEGP---DPREVELYLEEILS--LMQLGEDYTEFMVSKI------- 375
I + LL+ + D +E+E + L L ++ +++ +SKI
Sbjct: 301 SIASYKYILLHAKLKNRAFVSDQKELERVSLQTLHPILNEMSAIVSKWNISKIFISRLVL 360
Query: 376 ----KSLSSVDPALVPRATKA--FRSGSFSKVV-QEITGFYVILEGFFMVENVRKAIRID 428
+S DP++ A F S ++ +++ + LE ++ ++ ++ ++
Sbjct: 361 RLSQSDGTSNDPSVQDNLICASIFNSSKMELLLKKQLLPSLLQLETYYFRRSIETSLELE 420
Query: 429 EYVP--DSLTTSMVDDVFYVLQSCLRRAIST-SNISSVIAVLSSASSLLSNEYQEALQQK 485
EY +S+VDDV YV + +RA T S++ V S +L N+Y L
Sbjct: 421 EYYTKVSPWMSSIVDDVMYVTKQVFQRAFFTVSSLFFTRFVNESLIPILRNDYYVYLSHN 480
Query: 486 TRE-PNLGAKLF-----LGGVGVQKTGTEIATALNNMDVSSEYVLKLKHEIEEQCAEVFP 539
N+ F + ++ I T +N+ +S +Y+ + + + EVF
Sbjct: 481 LLTVCNIIKAQFQRLKNANSIPAKQVENYI-TLVNSASLSKQYLKSIVDGVSSRLEEVFA 539
Query: 540 TPADREKVKSCLSELGDLSKMFKQILNMGMEQLVAT-VTPRIRPVL-DSVATISYELSEA 597
D++ VK + L+ F+ + + PRI + DS I+Y LS
Sbjct: 540 FAKDQKLVKKSIDNFLQLTVNFENLCKTSFNMYFPIFLLPRIEQCIDDSFDGINYVLSYE 599
Query: 598 EYADNEVNDPWVQRLLHAVETNAAWLQPLMTANNYDSFVHLIIDFIVKRLEVIMMQK-KF 656
+Y ++ V L +V L+ T N S + + +E +++ K ++
Sbjct: 600 DYTKETEHERLVVTRLRSVWDRVLLLEQF-TPENQLSLRSMACEKAASYIENLILYKIQW 658
Query: 657 SQLGGLQLDRDTRASVSHFSSMTQRTVRDKFARLTQMATILNLE 700
+ G + L+ D + ++ FS+ Q +R F RL ++ +L E
Sbjct: 659 NDYGAMALENDISSLITIFSN-DQANLRHSFERLQEILILLVWE 701
>sp|Q06096|COG4_YEAST Conserved oligomeric Golgi complex subunit 4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=COG4 PE=1
SV=1
Length = 861
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 89/473 (18%), Positives = 191/473 (40%), Gaps = 71/473 (15%)
Query: 56 QRALDVDLDSLLSQRTDLDKHLLQLQKSAEVLDIVKADSDHMLSNVRSTSDLADQVSRKV 115
Q +L+ + L QRT+L L Q ++ ++ + S++ A + +
Sbjct: 65 QSSLNKESRKLELQRTNLTTTLTQFHET--------------VATISSSNARAKAIHDDI 110
Query: 116 RELDLAQSRVNDTLLRIDAIVDRNNCLDGVKTALDEENFEAAAKFVQRF----------V 165
+D ++ VN TL + + N + +AL+ +++ AA +
Sbjct: 111 ETVDQERALVNKTLQFVKDVRTLKNNISLAHSALETKDYLVAATAINEIRSLPDKKLIVS 170
Query: 166 EIDNKYKDSGSDQREQLLTAK---KQLEGIVKKRVLAAVDQRDHGTILRFIKLYSPLGIE 222
E K S E + K K+L + +++ + A +D + K++ +G +
Sbjct: 171 EFAKKVVPSSEIPEEPAILIKNWCKELTSLFQEQFMEATRTQDIKELTLMFKMFPMIGQD 230
Query: 223 EEGLQVYVGYLKKVIGMRWRMEYDNLVELMEQSQDQNQVNFVGCLTNLFKDIVLAIEEND 282
GL +Y Y+ +I R N +E + + Q F L +LFK + I ++
Sbjct: 231 VLGLDLYSKYVCDIIADESRKIMSNSME----NSTKFQGFFSQVLLHLFKIVSTIINDHS 286
Query: 283 EILRGLCGEDGIVYAICELQEECDSRGCLILKKYMEYRKLGKLSAEINTQNKNLLNVGVS 342
+++ G+ +V+ + ++++E D + LIL +ME RK+ + +IN + N V+
Sbjct: 287 KVIATCYGKKHMVHVMEKVEKEADLQASLILDIFMETRKIERTIHDINEWEHSQKNEDVN 346
Query: 343 EGPDPREVE-----------------LYLEEILSLMQLGEDYTEFMVSKIKSLSSVDPAL 385
+ ++E L + E ++Q Y+ F K S + P +
Sbjct: 347 IDSNQSDIETDGETEKSSIISIHDLALLIMEFSQILQNWSMYSRFYSVKWNEFSDLHPHV 406
Query: 386 VPRATKAFRSGSFS------KVVQEITGFY-----------VILEGFFMVENVRKAIRID 428
+ + G F+ KV E F + LE + ++ A+ ++
Sbjct: 407 L-QPPPPIADGKFALKLKQDKVFDEFQVFVLNHLQRSFRNSISLEELPSLNDLITAVPLN 465
Query: 429 EYVPDSLT---TSMVDDVFYVLQSCLRRAISTSNISSVIAVLSSASSLLSNEY 478
++ D+++ TS++DD+ +++ L ++T + + L+ N +
Sbjct: 466 DH--DNISYPVTSVLDDLILLVRKNLISVVNTGQFKLLASFLNELVKFFQNRF 516
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 619 NAAWLQPLMTANN------YDSFVHLIIDFIVKRLEVIMMQKKFSQLGGLQLDRDTRASV 672
N+ W Q ++ N Y + +I+D+IV LE + +F++LG +LDR+ +
Sbjct: 735 NSKWNQLIIPYKNILHNEAYAELLSVIVDYIVTTLEQRIWTLEFNELGVTKLDRELSLFI 794
Query: 673 SHFSSMTQRTVRDKFARLTQMATILNLEKVSEIL---DFWGENSGPMTWRLTPAEVRRVL 729
+ + +R+KF +LTQ+ +L L+ + L D + +G W + E +
Sbjct: 795 GNMCGLN-YNLREKFLKLTQIVLLLGLDDDNFDLTTGDIKDDFNGTFDWVINSQERIKAR 853
Query: 730 GLRVD 734
+++D
Sbjct: 854 NMKID 858
>sp|Q2T703|BOPA_BURTA Effector protein BopA OS=Burkholderia thailandensis (strain E264 /
ATCC 700388 / DSM 13276 / CIP 106301) GN=bopA PE=3 SV=1
Length = 512
Score = 38.5 bits (88), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 54 AYQRALDVDLDSLLSQRTDLDKHLLQLQKSAEVLDIVKADSDHMLSNVRSTSDLADQVSR 113
AY A+ +D+L QR D+++H +L+ SA V +A S+ + S S LADQ R
Sbjct: 345 AYALAVQARIDALNQQRADVERHCARLRGSASVRQAWRAFSE---AGNASGSPLADQAGR 401
Query: 114 KVRELDLAQSRVNDTLLRIDAI 135
Q+R+++ ++ I
Sbjct: 402 GRASAHTRQARLDEHAREVERI 423
>sp|Q88X53|SYR_LACPL Arginine--tRNA ligase OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=argS PE=3 SV=1
Length = 562
Score = 37.0 bits (84), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 19/86 (22%)
Query: 55 YQRALDVDLDSL---------LSQRTDL--DKHLLQLQKSAEVLDIVKADSDHML----- 98
YQR LD+D DS + + D+ DKHLLQ + AEV+D+ K D + L
Sbjct: 243 YQR-LDIDFDSFKGEAFYNDKMQEVVDILEDKHLLQESQGAEVVDLSKYDLNPALIKKSD 301
Query: 99 -SNVRSTSDLADQVSRKVRELDLAQS 123
+ + T DLA + RK R D QS
Sbjct: 302 GATLYITRDLAAAIYRK-RTYDFVQS 326
>sp|B6EP29|AROE_ALISL Shikimate dehydrogenase OS=Aliivibrio salmonicida (strain LFI1238)
GN=aroE PE=3 SV=1
Length = 273
Score = 33.9 bits (76), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 16/118 (13%)
Query: 477 EYQEALQQKTREPNLGAKLFLGGVGVQKTGTEIATALNNMDVSSEYVLKLKHEIEEQCAE 536
+YQ LQ K ++ L G G G + L + SS V+ +E E AE
Sbjct: 112 QYQVPLQDK--------RILLIGAGGAARG--VLLPLLKQNPSSITVVNRTYEKAEALAE 161
Query: 537 VFPTPADREKVKSCLSELGDLSKMFKQILNMGMEQLVATVTPRIRPVLDSVATISYEL 594
+F E V+ + D+++ F I+N L + P I PV+ S +ISY++
Sbjct: 162 IFSAYGAVEAVR-----MSDVTRSFDVIINSTSASLSGEL-PNISPVIFSKGSISYDM 213
>sp|Q8K440|ABC8B_MOUSE ATP-binding cassette sub-family A member 8-B OS=Mus musculus
GN=Abca8b PE=2 SV=2
Length = 1620
Score = 33.5 bits (75), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 362 QLGEDYTEFMVSKIKSLSSVDPA------LVPRATKAFRSGSFSKVVQEITGFYVILEGF 415
+ G+DY + K+K+L V+P L P+A++ R S + + + F
Sbjct: 1506 KFGKDY--LLEMKVKTLEQVEPLNTEILRLFPQASRQERYSSLMAYKLPVEAVQPLSQAF 1563
Query: 416 FMVENVRKAIRIDEYVPDSLTTSMVDDVF 444
F +E V++ ++EY SL+ S ++ VF
Sbjct: 1564 FKLEKVKQTFDLEEY---SLSQSTLEQVF 1589
>sp|A4QP72|FA83D_DANRE Protein FAM83D OS=Danio rerio GN=fam83d PE=2 SV=1
Length = 534
Score = 33.5 bits (75), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 372 VSKIKSLSSVDPALVPRATKAFRSGSFSKVVQEITGFYVIL-EGFFMV-ENVRKAIRIDE 429
V+ +S ++P ++ AF +GS+ V + + F E + E R+ IR +
Sbjct: 98 VTYFPEVSDIEPPVLENGWPAFTTGSYRGVTRAVAYFQPSYGECIYSCKEAARRMIRNAK 157
Query: 430 YVPDSLTTSMVD-DVFYVL-QSCLRRAISTS---NISSVIAVLSSASSLLSNEYQEALQQ 484
V +T SM D D+F+ L ++C RR + + SSV + L +L + E LQ
Sbjct: 158 EVIAIVTDSMTDLDIFHDLREACTRRRVPVYILLDQSSVASFLQMCKNLCVH-LDELLQM 216
Query: 485 KTR 487
K R
Sbjct: 217 KVR 219
>sp|Q5EAB4|CHID1_BOVIN Chitinase domain-containing protein 1 OS=Bos taurus GN=CHID1 PE=2
SV=1
Length = 393
Score = 33.1 bits (74), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 579 RIRPVLDSVATISYELSEAEYADNEVNDPWVQRLLHAVETNAAWLQPLMTANNY 632
++ PVLD + ++Y+ S A+ A PWV+ + ++ + W ++ N+
Sbjct: 248 QLAPVLDGFSLMTYDYSTAQPAGPNAPLPWVRACVQVLDPKSKWRSKILLGLNF 301
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 246,751,207
Number of Sequences: 539616
Number of extensions: 9863231
Number of successful extensions: 33784
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 33682
Number of HSP's gapped (non-prelim): 191
length of query: 745
length of database: 191,569,459
effective HSP length: 125
effective length of query: 620
effective length of database: 124,117,459
effective search space: 76952824580
effective search space used: 76952824580
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)