Query 004552
Match_columns 745
No_of_seqs 160 out of 280
Neff 7.9
Searched_HMMs 29240
Date Tue Mar 26 18:00:41 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004552.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1858-1862//hhsearch_pdb/004552hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hr0_A COG4; conserved oligome 1.0 1 1 433.0 25.1 245 501-745 14-263 (263)
2 2fji_1 Exocyst complex compone 1.0 1 1 231.1 31.2 319 400-743 7-362 (399)
3 2a2f_X Exocyst complex compone 1.0 1 1 60.1 23.4 239 431-701 68-320 (325)
4 3swh_A MUNC13-1, protein UNC-1 1.0 1 1 58.1 24.4 286 404-711 13-338 (341)
5 3fhn_A Protein transport prote 1.0 1 1 35.0 45.4 177 554-732 504-700 (706)
6 2d2s_A Exocyst complex compone 1.0 1 1 31.9 17.7 150 141-307 21-182 (235)
7 3ns4_A Vacuolar protein sortin 1.0 1 1 25.4 11.3 32 457-488 198-229 (271)
8 1ldj_A Cullin homolog 1, CUL-1 1.0 1 1 20.0 17.3 165 191-377 285-460 (760)
9 1vyk_A Oxygen-evolving enhance 1.0 1 1 17.7 8.4 65 147-212 64-133 (149)
10 4a64_A Cullin-4B, CUL4B, CUL-4 1.0 1 1 16.7 10.9 53 519-572 207-261 (354)
No 1
>3hr0_A COG4; conserved oligomeric golgi complex, intracellular trafficking, vesicle tethering, multisubunit tethering complex, exocyst; 1.90A {Homo sapiens}
Probab=1.00 E-value=1 Score=433.02 Aligned_cols=245 Identities=41% Similarity=0.774 Sum_probs=234.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q ss_conf 6666135798874459989999999999999987511999133----99999999766655999999999999999-993
Q 004552 501 GVQKTGTEIATALNNMDVSSEYVLKLKHEIEEQCAEVFPTPAD----REKVKSCLSELGDLSKMFKQILNMGMEQL-VAT 575 (745)
Q Consensus 501 ~~~~~~~~~l~~LNn~~~s~ey~~~L~~~l~~~~~~~f~~~~d----~~~i~~~l~~l~~~~~~f~~ll~~~i~~L-~~~ 575 (745)
+++..+..|+++|||+++|.+|+.+|++++++.+.+.||++.| .+++.+|++++.+++++|++++++|+++| .++
T Consensus 14 ~~e~~~~~Flv~LNnld~s~eyi~rL~~~l~~~l~~~Fp~~~d~~~~~~kv~~~l~~l~~~~~k~~~ll~~gi~~Lf~~~ 93 (263)
T 3hr0_A 14 STDEAKMSFLVTLNNVEVCSENISTLKKTLESDCTKLFSQGIGGEQAQAKFDSCLSDLAAVSNKFRDLLQEGLTELNSTA 93 (263)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 85788856730226599999999999999988899868986410678999999999999999999999999999999997
Q ss_pred HHHCCHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 21070553411014555569676322005996899999999996998762109346999999999999999999985166
Q 004552 576 VTPRIRPVLDSVATISYELSEAEYADNEVNDPWVQRLLHAVETNAAWLQPLMTANNYDSFVHLIIDFIVKRLEVIMMQKK 655 (745)
Q Consensus 576 i~~rl~~~l~~~~~~~y~l~e~ey~~~~~~d~~~~~f~~~~~~l~~~~~~~Lt~~nf~~ll~~~~~~l~~~lE~~i~~~~ 655 (745)
++|||+|+++.|++++|.++|++|+.++.+|||+++|+..|+.++.||+++||++||+.|+++++.++++.||+++|+++
T Consensus 94 ikprLr~~l~~f~~~~y~l~eee~~~~e~~d~~~~~F~~~w~~ll~p~k~~Lt~~~y~~Ll~~~~~~la~~lE~~i~~~~ 173 (263)
T 3hr0_A 94 IKPQVQPWINSFFSVSHNIEEEEFNDYEANDPWVQQFILNLEQQMAEFKASLSPVIYDSLTGLMTSLVAVELEKVVLKST 173 (263)
T ss_dssp THHHHHHHHHGGGGSCBSCCHHHHHHHHHSCCSHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 69889999998725335677767755101668999999999999999998718579999999999999999999998277
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 55311468758778999998205750156679999999999617881356653237999865656999999998200589
Q 004552 656 FSQLGGLQLDRDTRASVSHFSSMTQRTVRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWRLTPAEVRRVLGLRVDF 735 (745)
Q Consensus 656 fn~lGal~ldkDir~l~s~l~~~~~~~iRekF~rL~QI~~lL~~e~~~e~~d~~~~~~~~~~w~Ls~~e~~~il~lR~Df 735 (745)
||+|||+|||||+|.+++++|+.++|.+||+|+||+||++|||+|+++|+.|||+++.|+++|+|||+|++++|++|+||
T Consensus 174 fn~lGal~LdrDvr~li~~~~~~~~~~lRekF~RL~QI~~lLnle~~eev~d~~~~~~~~~~W~Ls~~E~r~il~lRvDf 253 (263)
T 3hr0_A 174 FNRLGGLQFDKELRSLIAYLTTVTTWTIRDKFARLSQMATILNLERVTEILDYWGPNSGPLTWRLTPAEVRQVLALRIDF 253 (263)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHTTSCTTHHHHTHHHHHHHHHHTCSSGGGGGGTSGGGGTTCCCCSCHHHHHHHHTTBTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 07055899999999999999704661166899999999999847976899987334678853347999999999856369
Q ss_pred CHHHHHCCCC
Q ss_conf 9667741279
Q 004552 736 KPEAIALLKL 745 (745)
Q Consensus 736 ~~~~i~~l~l 745 (745)
+.++|++|||
T Consensus 254 ~~e~I~~l~l 263 (263)
T 3hr0_A 254 RSEDIKRLRL 263 (263)
T ss_dssp CHHHHHHCCC
T ss_pred CHHHHHHCCC
T ss_conf 8989976459
No 2
>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=231.13 Aligned_cols=319 Identities=15% Similarity=0.172 Sum_probs=256.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 89999844589689999999999998204--------58----9998862046789999999999975159998899999
Q 004552 400 KVVQEITGFYVILEGFFMVENVRKAIRID--------EY----VPDSLTTSMVDDVFYVLQSCLRRAISTSNISSVIAVL 467 (745)
Q Consensus 400 ~~~qel~~~Yi~Le~~~l~~Sv~kAi~~d--------e~----~~~~~~SS~vDDvffil~k~l~Ralstg~~~~~~a~i 467 (745)
....+|+..|+......+++-+.++++.| .+ ++|.+.|++++|+|+++++++++|..+++.+.++.++
T Consensus 7 ~~~~~L~~~Y~~~i~~~~~eW~~nil~~E~~~w~~r~~~P~~d~~g~~~t~~~~dvfqml~eql~~a~~~~~~~l~~~v~ 86 (399)
T 2fji_1 7 KEKETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTPPHSDSDGLLFLDGTKTCFQMFTQQVEVAAGTNQAKILVGVV 86 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCEECTTSCEECHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 45999999999999999999999999999999884689998699988528864799999999999998479730099999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHH-------C------CCCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99897778999999997502886321111-------2------887666613579887-445998999999999999998
Q 004552 468 SSASSLLSNEYQEALQQKTREPNLGAKLF-------L------GGVGVQKTGTEIATA-LNNMDVSSEYVLKLKHEIEEQ 533 (745)
Q Consensus 468 n~~~~~L~~~~~~~l~~~l~~~~~~~~~~-------~------~~~~~~~~~~~~l~~-LNn~~~s~ey~~~L~~~l~~~ 533 (745)
+.+++.|. .|....+..+....- +.+ . ...+.......|+++ +||...|.+|+.+|...+.+.
T Consensus 87 ~~~~~~L~-~f~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~liA~~Nn~~~~~e~~~~l~~~~~~~ 163 (399)
T 2fji_1 87 ERFSDLLT-KRQKNWISKISEEIK--KQINYNHKYDIDPESITPEDECPGGLVEYLIAVSNDQMKAADYAVAISSKYGKL 163 (399)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHH--HHHHHHHTTTTGGGSCCTTTCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHH--HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999-999999999999999--875201000124222476545654187865665544888999999999999986
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH-HCCCCCCCCHHHHHHHCCCCHHHHHH
Q ss_conf 75119991339999999976665599999999999999999321070553411-01455556967632200599689999
Q 004552 534 CAEVFPTPADREKVKSCLSELGDLSKMFKQILNMGMEQLVATVTPRIRPVLDS-VATISYELSEAEYADNEVNDPWVQRL 612 (745)
Q Consensus 534 ~~~~f~~~~d~~~i~~~l~~l~~~~~~f~~ll~~~i~~L~~~i~~rl~~~l~~-~~~~~y~l~e~ey~~~~~~d~~~~~f 612 (745)
+...| ...+...+..+.+.|.++.+.|+..|.+.+..+|+|++.. |.+.||. ++++..+
T Consensus 164 ~~~~~--------~~~~~~~l~~~~~~f~~l~~~~~~~L~~~if~dl~p~~~~lft~~W~~------------~~~v~~i 223 (399)
T 2fji_1 164 VSKVY--------EKQITNHLEGTLDGFAEVAQCSSLGLITLMFDDLRKPYQEIFSKTWYM------------GSQAQQI 223 (399)
T ss_dssp SCHHH--------HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTHHHHTTTTSGGGTT------------CCHHHHH
T ss_pred CCHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC------------CCHHHHH
T ss_conf 26778--------888899999999999999999999999999998899999857703008------------7679999
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH-CCCCC---CCHHHHHHHHHHHHHHHHHHCCCCH------
Q ss_conf 9999996998762109346999999999999999999985-16655---3114687587789999982057501------
Q 004552 613 LHAVETNAAWLQPLMTANNYDSFVHLIIDFIVKRLEVIMM-QKKFS---QLGGLQLDRDTRASVSHFSSMTQRT------ 682 (745)
Q Consensus 613 ~~~~~~l~~~~~~~Lt~~nf~~ll~~~~~~l~~~lE~~i~-~~~fn---~lGal~ldkDir~l~s~l~~~~~~~------ 682 (745)
+.+++.++.+|+.+|++.+|+.|+..+...++......++ +.+|+ ..||.++.+|++.+..+|.+++.+.
T Consensus 224 ~~ti~dy~~d~~~~L~~~~~~~l~~~~~~~~v~~Yl~~l~~~~~~~~~~~~~~~~l~~D~~~l~~~f~~~~~~~~~~~~~ 303 (399)
T 2fji_1 224 ADTLDEYLLDIKPQMNSVLFVNFIDNVIGETIIKFLTALSFEHSFKNKNNKFLEAMKRDFEIFYQLFVKVLDGNESKDTL 303 (399)
T ss_dssp HHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHGGGGCCCCCCGGGHHHHHHHHHHHHHHHHHHHHTTTCTTHHHH
T ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 99999999999998086999999999999999999999846777784059999999999999999999855653202577
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCC
Q ss_conf 5667999999999961788135665323799986565699999999820058996677412
Q 004552 683 VRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIALL 743 (745)
Q Consensus 683 iRekF~rL~QI~~lL~~e~~~e~~d~~~~~~~~~~w~Ls~~e~~~il~lR~Df~~~~i~~l 743 (745)
++++|.+|.+|+. |+.|.++.+.++|+... ...|.+++..++++|.+|.||++++++++
T Consensus 304 v~~~~~~l~~l~~-L~~d~~~~i~~~~~~l~-~~ypD~~~~~V~aiL~~R~D~~~~~~k~l 362 (399)
T 2fji_1 304 ITQNFTVMEFFMD-LSCEPIDSILDIWQKYL-EVYWDSRIDLLVGILKCRKDVSSSERKKI 362 (399)
T ss_dssp HHHHHHHHHHHHH-HHHSCGGGHHHHHHHHH-TTCTTCCSHHHHHHHTTCTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHH-HCCCCHHHHHHHHHHHH-HHCCCCCHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 8779999999997-36895777999999999-86899999999999982548998999999
No 3
>2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=60.10 Aligned_cols=239 Identities=14% Similarity=0.179 Sum_probs=160.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHC-C----CCHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCC
Q ss_conf 99988620467899999999999751-5----999889999-99989777899999999750288632111128876666
Q 004552 431 VPDSLTTSMVDDVFYVLQSCLRRAIS-T----SNISSVIAV-LSSASSLLSNEYQEALQQKTREPNLGAKLFLGGVGVQK 504 (745)
Q Consensus 431 ~~~~~~SS~vDDvffil~k~l~Rals-t----g~~~~~~a~-in~~~~~L~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 504 (745)
|-..+.|++|=++...+|+=+..++. . ++...+-.+ .+.+..+|...+.+.|..+++.++....
T Consensus 68 P~~lPFS~~vP~~c~~ir~fi~~~~~F~~~~~~~~~eidd~lrks~d~LL~~~v~~~L~~~i~~~~~~l~---------- 137 (325)
T 2a2f_X 68 PKKFPFSRMVPEVYHQAKEFMYACMKFAEELTLSPNEVAAMVRKAANLLLTRSFSGCLSVVFRQPSITLT---------- 137 (325)
T ss_dssp CCCSSSBTHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTSCHH----------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH----------
T ss_conf 8125760788999999999999999998733667213889999999999999999999999854478699----------
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 13579887445998999999999999998751199913399999999766655999999999999999993210705534
Q 004552 505 TGTEIATALNNMDVSSEYVLKLKHEIEEQCAEVFPTPADREKVKSCLSELGDLSKMFKQILNMGMEQLVATVTPRIRPVL 584 (745)
Q Consensus 505 ~~~~~l~~LNn~~~s~ey~~~L~~~l~~~~~~~f~~~~d~~~i~~~l~~l~~~~~~f~~ll~~~i~~L~~~i~~rl~~~l 584 (745)
....+++-+.-.+.++.+++++...+.. . +. .. .+. -.+.|++..+.+-+.++..+..||...+
T Consensus 138 qi~Qi~iNl~~le~ac~~le~~l~~~~~---~--~~-~~------~l~----a~~~f~~~r~~Ae~~I~~~v~~KIDdfl 201 (325)
T 2a2f_X 138 QLIQIIIDTQYLEKAGPFLDEFVCHMTN---T--ER-SV------SQT----PSAMFHVARQDAEKQVGLRICSKIDEFF 201 (325)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHT---C--CC------------------CCSCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC---C--CC-CC------CHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999799999999999999999828---8--75-33------111----7899999999999999999998999998
Q ss_pred HHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCHH
Q ss_conf 110145555696763220059968999999999969987621093469999999999999999999851---66553114
Q 004552 585 DSVATISYELSEAEYADNEVNDPWVQRLLHAVETNAAWLQPLMTANNYDSFVHLIIDFIVKRLEVIMMQ---KKFSQLGG 661 (745)
Q Consensus 585 ~~~~~~~y~l~e~ey~~~~~~d~~~~~f~~~~~~l~~~~~~~Lt~~nf~~ll~~~~~~l~~~lE~~i~~---~~fn~lGa 661 (745)
.....||.+++- .+.-+.++..++..++..+.. -..|-++.-+..+...+.+++..+-..+.. +++|.-|-
T Consensus 202 -~la~yDW~~~~~----~~~ps~yi~dli~fL~~~f~s-l~~LP~~v~~~~~~~a~~his~~l~~~Ll~~~vk~in~~av 275 (325)
T 2a2f_X 202 -ELSAYDWLLVEP----PGIASAFITDMISYLKSTFDS-FAFKLPHIAQAACRRTFEHIAEKIYSIMYDEDVKQISTGAL 275 (325)
T ss_dssp -TTCCTTCC--------CCSCCHHHHHHHHHHHHHHHT-TTTTSHHHHHHHHHHHHHHHHHHHHHHHTC------CCTTH
T ss_pred -HHCCCCCCCCCC----CCCCCHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHH
T ss_conf -760368878889----998568999999999999999-87399999999999999999999999864861143299999
Q ss_pred HHHHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 6875877899999820-----575015667999999999961788
Q 004552 662 LQLDRDTRASVSHFSS-----MTQRTVRDKFARLTQMATILNLEK 701 (745)
Q Consensus 662 l~ldkDir~l~s~l~~-----~~~~~iRekF~rL~QI~~lL~~e~ 701 (745)
.+|+.||..+-.+..+ .+...+++.|.-|.|.+.||-.+.
T Consensus 276 ~~~~~Dv~~lE~fa~~~~v~~l~~~~L~~~F~eLrQli~Ll~~~~ 320 (325)
T 2a2f_X 276 TQINLDLMQCEFFAASEPVPGLKEGELSKYFLRNRQLLDLLILEH 320 (325)
T ss_dssp HHHHHHHHHHHHHHTTCSSSSCCSSTTGGGGHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 989999999999987278887552269999899999999987521
No 4
>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus}
Probab=1.00 E-value=1 Score=58.07 Aligned_cols=286 Identities=10% Similarity=0.097 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCC------CCCCCCHHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9844589689999999999998204589------99886204678999999999997--515999889999999897778
Q 004552 404 EITGFYVILEGFFMVENVRKAIRIDEYV------PDSLTTSMVDDVFYVLQSCLRRA--ISTSNISSVIAVLSSASSLLS 475 (745)
Q Consensus 404 el~~~Yi~Le~~~l~~Sv~kAi~~de~~------~~~~~SS~vDDvffil~k~l~Ra--lstg~~~~~~a~in~~~~~L~ 475 (745)
+++...+.........-|++|++.|..+ +...-||.|-|+|-++++++.-- ++-.+......++..+.+.+.
T Consensus 13 ~~V~~Wl~~~~~k~~~~v~~Ai~~Dk~~~~~~~~~~~~hSsSvvDif~~~~Q~~~~~~~L~WpD~~~~~~f~t~l~~~i~ 92 (341)
T 3swh_A 13 PFVIQWLDENEEVSRDFLHGALERDKKDGFQQTSEHALFSCSVVDVFSQLNQSFEIIKKLECPDPQIVGHYMRRFAKTIS 92 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSSSCCSCTHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999989999999999986213587553556765655599999999999999997799988999999999999999
Q ss_pred ---HHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf ---99999999750288632111128876666135798874459989999999999999987511999133999999997
Q 004552 476 ---NEYQEALQQKTREPNLGAKLFLGGVGVQKTGTEIATALNNMDVSSEYVLKLKHEIEEQCAEVFPTPADREKVKSCLS 552 (745)
Q Consensus 476 ---~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~LNn~~~s~ey~~~L~~~l~~~~~~~f~~~~d~~~i~~~l~ 552 (745)
..|.+.+.++++.. .+..+ ....|+++||++..-..+.++..++... ....+ ...
T Consensus 93 ~~~~~Y~~~l~~~~~~~-------~~~e~----~~~~Cv~lNNie~lR~~L~~l~~~l~~~-----~l~~~---~~~--- 150 (341)
T 3swh_A 93 NVLLQYADIVSKDFASY-------CSKEK----EKVPCILMNNTQQLRVQLEKMFEAMGGK-----ELDAE---ASG--- 150 (341)
T ss_dssp HHHHHHHHHHHHHHHHH-------CCTTS----CHHHHHHHHHHHHHHHHHHHHHHHTTTT-----TSCHH---HHH---
T ss_pred HHHHHHHHHHHHHHHHH-------HHHHC----CCCHHHHCCCHHHHHHHHHHHHHHCCHH-----HHHHH---HHH---
T ss_conf 99999999999998765-------23321----2464564161999999999988861643-----57899---999---
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHH-------HHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 6665599999999999999999321070553411014555569676-------322005996899999999996998762
Q 004552 553 ELGDLSKMFKQILNMGMEQLVATVTPRIRPVLDSVATISYELSEAE-------YADNEVNDPWVQRLLHAVETNAAWLQP 625 (745)
Q Consensus 553 ~l~~~~~~f~~ll~~~i~~L~~~i~~rl~~~l~~~~~~~y~l~e~e-------y~~~~~~d~~~~~f~~~~~~l~~~~~~ 625 (745)
.+.++..+++.++......+.+.+.++|+..+..+...=+.+...+ -......+..+..+...++.-+..+..
T Consensus 151 ~~~~lq~~l~~vl~~l~~~~~~~~~~~i~~~v~~m~~~l~~i~~~~~~~~~~~~~~~~~~~~ai~PLm~yLd~~L~~l~~ 230 (341)
T 3swh_A 151 TLKELQVKLNNVLDELSHVFATSFQPHIEECVRQMGDILSQVKGTGNVPASACSSVAQDADNVLQPIMDLLDSNLTLFAK 230 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCC-----------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999888899999999999976105566784323543346788999999999999999999
Q ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHH----------------CCCCCCCHHHHHHHHHHHHHHHHHHCCCC----HH-H
Q ss_conf 109346999999999999999999985----------------16655311468758778999998205750----15-6
Q 004552 626 LMTANNYDSFVHLIIDFIVKRLEVIMM----------------QKKFSQLGGLQLDRDTRASVSHFSSMTQR----TV-R 684 (745)
Q Consensus 626 ~Lt~~nf~~ll~~~~~~l~~~lE~~i~----------------~~~fn~lGal~ldkDir~l~s~l~~~~~~----~i-R 684 (745)
.|...||..++..+-..+...++..+. .+.++.-=.-.|+.++..+..||..-+.. .+ +
T Consensus 231 ~L~~~~f~rvL~~lW~~~l~~l~~~i~lP~~~~~~~~~~~~~~~r~~~~~~~~~l~~~L~~L~~fFhA~G~GL~~~~Lek 310 (341)
T 3swh_A 231 ICEKTVLKRVLKELWKLVMNTMERTIVLPPEFSKLKDHMVREEAKSLTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEK 310 (341)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCSSSCC----------CTTHHHHHHHHHHHHHHHHGGGTSCCHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC
T ss_conf 98788899999999999999999997366224566766404556799999999999999999998645999999788704
Q ss_pred -HHHHHHHHHHHHHCCCCHHHHHHHHCC
Q ss_conf -679999999999617881356653237
Q 004552 685 -DKFARLTQMATILNLEKVSEILDFWGE 711 (745)
Q Consensus 685 -ekF~rL~QI~~lL~~e~~~e~~d~~~~ 711 (745)
+.+.+|.++..+...+..+-+..|+..
T Consensus 311 s~~~~~l~~~L~L~~~~T~~LI~~f~~~ 338 (341)
T 3swh_A 311 SPDLQSLRYALSLYTQATDLLIKTFVQT 338 (341)
T ss_dssp CHHHHHHHHHHHHC--------------
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHC
T ss_conf 7669999999988649989999999853
No 5
>3fhn_A Protein transport protein TIP20; TIP20P, vesicle tethering, endoplasmic reticulum, ER-golgi transport, membrane, phosphoprotein; 3.00A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=35.03 Aligned_cols=177 Identities=14% Similarity=0.133 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHCC-CCC-CCCHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 66559999999999-9999999321070553411014-555-569676322005---9968999999999969987621-
Q 004552 554 LGDLSKMFKQILNM-GMEQLVATVTPRIRPVLDSVAT-ISY-ELSEAEYADNEV---NDPWVQRLLHAVETNAAWLQPL- 626 (745)
Q Consensus 554 l~~~~~~f~~ll~~-~i~~L~~~i~~rl~~~l~~~~~-~~y-~l~e~ey~~~~~---~d~~~~~f~~~~~~l~~~~~~~- 626 (745)
|.++...|..+.+. ..+.++..+..-++..+.++.. ..| .+.+..-...+. -.+-....+..+...+..+...
T Consensus 504 FDetIs~Y~~L~~~~~~~~Iv~~v~~eik~~lK~Y~k~s~W~s~~~~~~~~~~~~lspSaEL~~~L~~L~~~L~~L~~~l 583 (706)
T 3fhn_A 504 FQNVENDYEKAMSTDMQNSIVHRIQKLLKETLRNYFKISTWSTLEMSVDENIGPSSVPSAELVNSINVLRRLINKLDSMD 583 (706)
T ss_dssp THHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTHHHHHCCGGGTCCCC------CCCCCCGGGHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 89999999999988899999999999999999877481668566787766655568898889999999999999999813
Q ss_pred CCHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 09346999999999999999-99998516655311468758778999998205750156679999999999617881356
Q 004552 627 MTANNYDSFVHLIIDFIVKR-LEVIMMQKKFSQLGGLQLDRDTRASVSHFSSMTQRTVRDKFARLTQMATILNLEKVSEI 705 (745)
Q Consensus 627 Lt~~nf~~ll~~~~~~l~~~-lE~~i~~~~fn~lGal~ldkDir~l~s~l~~~~~~~iRekF~rL~QI~~lL~~e~~~e~ 705 (745)
|.+..|..+...++..+..+ ++..++..+||.-||.||..|+..+.+.+. .+.....-.|.+|...+.||++.-+.--
T Consensus 584 L~~~~f~~IwR~ia~~Ld~yL~e~IL~~nkFS~~Ga~Qf~~D~~~L~~v~~-lp~~~~~~~~~~L~E~l~LL~L~~d~~~ 662 (706)
T 3fhn_A 584 IPLAISLKVKNELLNVIVNYFTESILKLNKFNQNGLNQFLHDFKSLSSILS-LPSHATNYKCMSLHELVKILKLKYDPNN 662 (706)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTTSCBCHHHHHHHHHHHHHHHTTSC-CCTTCCCHHHHHHHHHHHHHGGGGCGGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf 777899999999999999999999986086488889999999999999856-8884145677999999998179887422
Q ss_pred HHHH-----CCC-C------CCCCCCCCHHHHHHHHHCC
Q ss_conf 6532-----379-9------9865656999999998200
Q 004552 706 LDFW-----GEN-S------GPMTWRLTPAEVRRVLGLR 732 (745)
Q Consensus 706 ~d~~-----~~~-~------~~~~w~Ls~~e~~~il~lR 732 (745)
.+|. ..+ . -++ -.|++.|+.-+|-+.
T Consensus 663 ~~f~~~~y~~~~~~~~l~~~~~i-~~l~~~~i~d~lyr~ 700 (706)
T 3fhn_A 663 QQFLNPEYIKTGNFTSLKEAYSI-KYLKDTKIQDALYRI 700 (706)
T ss_dssp TTTTSHHHHHHCCCSHHHHHHTC-SSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHHHHHCCC-CCCCHHHHHHHHHHH
T ss_conf 06778988701774889986486-468878999999999
No 6
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=1.00 E-value=1 Score=31.91 Aligned_cols=150 Identities=13% Similarity=0.140 Sum_probs=106.2
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC----C----CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 49989974251149999999999980210027988----4----289999999999999999999999972994578998
Q 004552 141 CLDGVKTALDEENFEAAAKFVQRFVEIDNKYKDSG----S----DQREQLLTAKKQLEGIVKKRVLAAVDQRDHGTILRF 212 (745)
Q Consensus 141 ~~~~v~~al~~~d~e~AA~~i~r~l~i~~~~~~~~----~----~~~~~L~~~~~~L~~~~~~~F~~A~~~~D~~~i~r~ 212 (745)
-.+.+...+..++|+.|...+.+..+.......++ + .....+++-+..|.+.+.+.... ..+..++.+.
T Consensus 21 ~~deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~~---~~~~~~~r~~ 97 (235)
T 2d2s_A 21 GVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS---SNEIVHLKSG 97 (235)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT---CSSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCHHHHHHH
T ss_conf 6298899999976999999999999998728444565536789999999999999999999999870---5877999999
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHCC
Q ss_conf 7730368862356887998998899888887689999865410367754189999999-999999999737998851086
Q 004552 213 IKLYSPLGIEEEGLQVYVGYLKKVIGMRWRMEYDNLVELMEQSQDQNQVNFVGCLTNL-FKDIVLAIEENDEILRGLCGE 291 (745)
Q Consensus 213 fKLfp~ig~~~eGl~~y~~yv~~~i~~~ar~~l~~~~~~~~~~~~~~~~~~~~~L~~L-fe~ia~ii~~h~~iI~~~yg~ 291 (745)
+.++-.+|.++.+.+.|.+.-...|....|.. +....++.|...|..+ |..|+.++.+...+ ||+
T Consensus 98 v~~L~rLg~~~~A~~lfL~~rs~~i~~~~r~l----------~~~gd~~~Yi~~Ls~i~Fs~I~~t~~~f~~~----F~~ 163 (235)
T 2d2s_A 98 TENMIKLGLPEQALDLFLQNRSNFIQDLILQI----------GSVDNPTNYLTQLAVIRFQTIKKTVEDFQDI----FKE 163 (235)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHH----STT
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH----------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----HCC
T ss_conf 99998879816999999999999999998872----------1468789999999999999999999999998----478
Q ss_pred ---CCHHHHHHHHHHHHHH
Q ss_conf ---2089999999999989
Q 004552 292 ---DGIVYAICELQEECDS 307 (745)
Q Consensus 292 ---~~m~~vi~~lq~e~d~ 307 (745)
..+-.++.=.-.|.+.
T Consensus 164 ~~~~~~S~lV~Wa~~eve~ 182 (235)
T 2d2s_A 164 LGAKISSILVDWCSDEVDN 182 (235)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHH
T ss_conf 9843133899999999999
No 7
>3ns4_A Vacuolar protein sorting-associated protein 53; GARP complex component, helical bundle, membrane tethering C membrane traffic, VPS51; HET: MSE; 2.90A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=25.41 Aligned_cols=32 Identities=3% Similarity=0.000 Sum_probs=25.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 59998899999998977789999999975028
Q 004552 457 TSNISSVIAVLSSASSLLSNEYQEALQQKTRE 488 (745)
Q Consensus 457 tg~~~~~~a~in~~~~~L~~~~~~~l~~~l~~ 488 (745)
.++...+..+.+++.++=+-.|..++...++-
T Consensus 198 ~w~~~~l~~F~~nl~ri~dp~W~~fi~~~l~i 229 (271)
T 3ns4_A 198 KWDKVLLGQFENNLARMQDPNWSKFVRQDLKI 229 (271)
T ss_dssp GGCHHHHHHHHHHHHTCCSHHHHHHHHHTTC-
T ss_pred ECCHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
T ss_conf 16889999999886706884298999976377
No 8
>1ldj_A Cullin homolog 1, CUL-1; cullin, ROC1, HRT1, zinc ring finger, ligase, ubiquitin, ubiquitination, SCF; 3.00A {Homo sapiens} SCOP: a.4.5.34 a.118.17.1 e.40.1.1 PDB: 1u6g_A 1ldk_A 1ldk_B 3rtr_A
Probab=1.00 E-value=1 Score=20.02 Aligned_cols=165 Identities=15% Similarity=0.211 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 99999999999729945789987730368862356887998998899888887689999865410367754189999999
Q 004552 191 GIVKKRVLAAVDQRDHGTILRFIKLYSPLGIEEEGLQVYVGYLKKVIGMRWRMEYDNLVELMEQSQDQNQVNFVGCLTNL 270 (745)
Q Consensus 191 ~~~~~~F~~A~~~~D~~~i~r~fKLfp~ig~~~eGl~~y~~yv~~~i~~~ar~~l~~~~~~~~~~~~~~~~~~~~~L~~L 270 (745)
..+...|..-...++.+.+.|+++||..+ .+|++.....+.++|.......+.... .+....+..|++.|..+
T Consensus 285 ~~l~~~~~~ll~~~~~~dL~~my~L~~rv---~~gl~~l~~~~~~~i~~~G~~~v~~~~----~~~~~~~~~~V~~ll~l 357 (760)
T 1ldj_A 285 EIFHTEFQNLLDADKNEDLGRMYNLVSRI---QDGLGELKKLLETHIHNQGLAAIEKCG----EAALNDPKMYVQTVLDV 357 (760)
T ss_dssp HHHHHHHHHHHHSCCTTHHHHHHHHHHHS---TTCHHHHHHHHHHHHHHHHHHHHHHHT----TSGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHH
T ss_conf 99999899999738888999999986747---543899999999999998799998763----03345779999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHH--HHH-HHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99999999973799885108620-8999999999998999999999--998-4446678999853002344678889999
Q 004552 271 FKDIVLAIEENDEILRGLCGEDG-IVYAICELQEECDSRGCLILKK--YME-YRKLGKLSAEINTQNKNLLNVGVSEGPD 346 (745)
Q Consensus 271 fe~ia~ii~~h~~iI~~~yg~~~-m~~vi~~lq~e~d~q~~~Il~~--f~~-~R~i~~~~~~i~~~~~~~~~~~~~~~~d 346 (745)
++- ...+|..+|+.+. +...+ +.-...+++. +.. ...-.+...-+..|....+..+ .-+.+
T Consensus 358 ~~k-------~~~lv~~~F~~d~~f~~al-------~~af~~~iN~~~~~~~~~~~~~~~E~la~y~D~~Lkk~-~k~~~ 422 (760)
T 1ldj_A 358 HKK-------YNALVMSAFNNDAGFVAAL-------DKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS-SKNPE 422 (760)
T ss_dssp HHH-------HHHHHHTTTTTCHHHHHHH-------HHHHHHHHHSSHHHHHHTSTTHHHHHHHHHHHHHHBCC-SSCCC
T ss_pred HHH-------HHHHHHHHCCCCHHHHHHH-------HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-CCCCC
T ss_conf 999-------9999999767868999999-------99999985688543444444332899988869987178-88897
Q ss_pred HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHCC
Q ss_conf 364889999999999758-------9999999987512
Q 004552 347 PREVELYLEEILSLMQLG-------EDYTEFMVSKIKS 377 (745)
Q Consensus 347 ~~~~d~ll~Eis~il~~~-------~lY~rFl~~~~~~ 377 (745)
..+++..++.+..+.... ..|.+++++|+-.
T Consensus 423 e~e~e~~L~~i~~lf~~i~~KDvF~~~Y~~~LakRLL~ 460 (760)
T 1ldj_A 423 EAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVH 460 (760)
T ss_dssp HHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
T ss_conf 88899999999999998088899999999999998457
No 9
>1vyk_A Oxygen-evolving enhancer protein 3; photosystem II, oxygen-enhancer evolving complex, water oxidizing complex, PSBQ, OEE3, photosynthesis; 1.49A {Spinacia oleracea} PDB: 1nze_A
Probab=1.00 E-value=1 Score=17.71 Aligned_cols=65 Identities=9% Similarity=0.107 Sum_probs=44.1
Q ss_pred HHHCCCCHHHHHHHHHHHHCCCC-CCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 74251149999999999980210-027----9884289999999999999999999999972994578998
Q 004552 147 TALDEENFEAAAKFVQRFVEIDN-KYK----DSGSDQREQLLTAKKQLEGIVKKRVLAAVDQRDHGTILRF 212 (745)
Q Consensus 147 ~al~~~d~e~AA~~i~r~l~i~~-~~~----~~~~~~~~~L~~~~~~L~~~~~~~F~~A~~~~D~~~i~r~ 212 (745)
..+++++|..+-.+||.=..... .+. .-+++-+..+.+...+|-.-+ .++|.|++.+|...+..+
T Consensus 64 ~lI~k~~W~~vrn~LR~~~~~Lr~Dl~~li~slp~~~kk~l~~La~~Lf~~l-e~LD~AAr~kd~~~a~~~ 133 (149)
T 1vyk_A 64 QFIDRKAWPSLQNDLRLRASYLRYDLKTVISAKPKDEKKSLQELTSKLFSSI-DNLDHAAKIKSPTEAEKY 133 (149)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH-HHHHHHHHTTCHHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCHHHHHHH
T ss_conf 8864553999999999768899999999987388977899999999999999-999999985799999999
No 10
>4a64_A Cullin-4B, CUL4B, CUL-4B; cell cycle; 2.57A {Homo sapiens}
Probab=1.00 E-value=1 Score=16.68 Aligned_cols=53 Identities=17% Similarity=0.349 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999987--51199913399999999766655999999999999999
Q 004552 519 SSEYVLKLKHEIEEQC--AEVFPTPADREKVKSCLSELGDLSKMFKQILNMGMEQL 572 (745)
Q Consensus 519 s~ey~~~L~~~l~~~~--~~~f~~~~d~~~i~~~l~~l~~~~~~f~~ll~~~i~~L 572 (745)
+.+|+.+....+.++. ...|-.+.-..++..++.... +.+....++..|+..|
T Consensus 207 ~~~Yl~~ve~rl~eE~~R~~~yL~~~T~~~l~~~~e~~L-I~~h~~~ll~~~~~~l 261 (354)
T 4a64_A 207 VPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQL-LGEHLTAILQKGLNNL 261 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHH-TGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_conf 999999999999999999998678604899999999999-9999999999879999
Done!