Your job contains 1 sequence.
>004558
MQNSNNDEASVTKTTEKPPLPKRSKTISDDTHFPGPLFPAVRRTDKPFDLRVSIDSDAAA
SSSSLSSSSLSSSNGFNERDWMYPSFLGPHMGRRRIKVKPSKLEFKGNEEKKRIQELGSK
KEEKAVASLAVTQSNSVTQTSSVTQLSGRTRGLKSSLMTYYMLIINCILCVCYAIHLRDR
VEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPF
VLYKYLDYLPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLII
FGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGL
VSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERD
KEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARA
LRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPG
LAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDN
YVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIM
VLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPL
ETFDSMSHWKTRLCILTHVLLPPFS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004558
(745 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q4VY51 - symbol:SYM8 "Probable ion channel SYM8... 2223 1.3e-233 2
TAIR|locus:2158799 - symbol:AT5G49960 species:3702 "Arabi... 2083 1.4e-215 1
TAIR|locus:2151276 - symbol:AT5G02940 species:3702 "Arabi... 276 4.5e-28 2
TAIR|locus:505006671 - symbol:AT5G43745 species:3702 "Ara... 285 1.0e-27 2
UNIPROTKB|O27564 - symbol:mthK "Calcium-gated potassium c... 117 9.0e-10 2
>UNIPROTKB|Q4VY51 [details] [associations]
symbol:SYM8 "Probable ion channel SYM8" species:3888 "Pisum
sativum" [GO:0034220 "ion transmembrane transport" evidence=NAS]
[GO:0042802 "identical protein binding" evidence=NAS] [GO:0044005
"induction by symbiont in host of tumor, nodule, or growth"
evidence=IMP] InterPro:IPR016040 GO:GO:0016021 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0034220 GO:GO:0031965 GO:GO:0042802
GO:GO:0005216 InterPro:IPR010420 Pfam:PF06241 EMBL:EF447276
EMBL:EF447277 EMBL:EF447280 EMBL:EF447283 EMBL:AJ973194
ProteinModelPortal:Q4VY51 TCDB:1.A.1.23.1 GO:GO:0044005
Uniprot:Q4VY51
Length = 894
Score = 2223 (787.6 bits), Expect = 1.3e-233, Sum P(2) = 1.3e-233
Identities = 459/698 (65%), Positives = 524/698 (75%)
Query: 39 PAVRRT----DKP-FDLRVSIXXXXXXXXXXXXXXXXXXXNGFNERDWMYPSFLG-PHMG 92
P ++RT +P +LRVSI F ++ YPSFLG
Sbjct: 17 PPLKRTKTLAQQPSLNLRVSIAAADNGIGNSSSSSTKTD---FEQQQRNYPSFLGIGSTS 73
Query: 93 RRRIKVKPSKLEFKGNEEKKRIQELGSKKEEKAVASLAXXXXXXXXXXXXXXXLSGRTRG 152
R+R P K K + +K + S + +
Sbjct: 74 RKRRPPPPPKPSNITPNVKPPASDFQTKPHSEPKTSPSSSSPPSLPIAITKQ--QQQQHS 131
Query: 153 LKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTD 212
+ S + +Y+ +I C++ V Y+ L+ ++ KL++ L C NG L D
Sbjct: 132 ISSPI--FYLFVITCVIFVPYSAFLQYKLAKLKDMKLQL---CCQIDFCSGNGKTSLQKD 186
Query: 213 NNSDSNFG----NADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPL 268
D +F NAD RT++LY V+ TL++PF+LYKY+DYLPQ+ NFS+RT NKE+VPL
Sbjct: 187 VVDDGSFSYYILNADSRTISLYIVLFTLVLPFILYKYIDYLPQMINFSRRTNSNKEDVPL 246
Query: 269 KKRVAYSVDVCFSVYPYAKXXXXXXXXXXXXXXXXXALYAVSDSSFAEALWLSWTFVADS 328
KKRVAY VDV FS+YPYAK ALYAV+ S AEALW SWT+VAD+
Sbjct: 247 KKRVAYMVDVFFSIYPYAKLLALLFATLFLIAFGGLALYAVTGGSMAEALWHSWTYVADA 306
Query: 329 GNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILIL 388
GNHA+ G G RIVSVSIS+GGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIE+NH+LIL
Sbjct: 307 GNHAETEGMGQRIVSVSISAGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIERNHVLIL 366
Query: 389 GWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPL 448
GWSDKLGSLLKQLA+ANKS+GGGVIVVLAE++KEEMEMDIAKLEFDFMGTSVICRSGSPL
Sbjct: 367 GWSDKLGSLLKQLAIANKSVGGGVIVVLAEKEKEEMEMDIAKLEFDFMGTSVICRSGSPL 426
Query: 449 ILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNE 508
ILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKE LRGHVVVEMSDLDNE
Sbjct: 427 ILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEALRGHVVVEMSDLDNE 486
Query: 509 PLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLR 568
PLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWP+LD L
Sbjct: 487 PLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPELDGLL 546
Query: 569 FEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVV 628
F++++ISFPDAIPCG+KV+A+GGKI++NPDDNYVL++GDEVLVIAEDDDTYAPGPLPEV
Sbjct: 547 FKDILISFPDAIPCGVKVSADGGKIVINPDDNYVLRDGDEVLVIAEDDDTYAPGPLPEVR 606
Query: 629 CKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLT 688
K F +I DPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWM NEVPEK+RE+KL
Sbjct: 607 -KGYFPRIRDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMFNEVPEKQRERKLA 665
Query: 689 DGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSM 726
G LD+ GL NIKLVHREGNAVIRRHLESLPLETFDS+
Sbjct: 666 AGELDVFGLENIKLVHREGNAVIRRHLESLPLETFDSI 703
Score = 53 (23.7 bits), Expect = 1.3e-233, Sum P(2) = 1.3e-233
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 5 NNDEASVTKTTEKPPLPKRSKTIS 28
+N+E + T KPPL KR+KT++
Sbjct: 4 SNEEPNSNLNTNKPPL-KRTKTLA 26
>TAIR|locus:2158799 [details] [associations]
symbol:AT5G49960 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR016040 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0031965 GO:GO:0005216 eggNOG:COG1226
EMBL:AB024032 InterPro:IPR010420 Pfam:PF06241 IPI:IPI00530187
RefSeq:NP_199807.1 UniGene:At.55463 ProteinModelPortal:Q9LTX4
SMR:Q9LTX4 PRIDE:Q9LTX4 EnsemblPlants:AT5G49960.1 GeneID:835060
KEGG:ath:AT5G49960 TAIR:At5g49960 HOGENOM:HOG000238512
InParanoid:Q9LTX4 OMA:ISEDNIT PhylomeDB:Q9LTX4
ProtClustDB:CLSN2687007 Genevestigator:Q9LTX4 GermOnline:AT5G49960
Uniprot:Q9LTX4
Length = 824
Score = 2083 (738.3 bits), Expect = 1.4e-215, P = 1.4e-215
Identities = 424/576 (73%), Positives = 473/576 (82%)
Query: 157 LMTYYMLIINCI--LCVC---YAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHT 211
L T + L +C+ +C C Y + LR +V +LE EN L C+ S + NN ++
Sbjct: 77 LWTQFSLT-HCLKFICSCSFTYVMFLRSKVSRLEAENIILLTRCN--SSSDNNEME---- 129
Query: 212 DNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPLKKR 271
+ NS R V +SVI+T ++PF+LY YLD L +KN +RT + KE+VPLKKR
Sbjct: 130 ETNS---------RAVVFFSVIITFVLPFLLYMYLDDLSHVKNLLRRTNQKKEDVPLKKR 180
Query: 272 VAYSVDVCFSVYPYAKXXXXXXXXXXXXXXXXXALYAVSDSSFAEALWLSWTFVADSGNH 331
+AYS+DVCFSVYPYAK ALYAVSD EALWLSWTFVADSG+H
Sbjct: 181 LAYSLDVCFSVYPYAKLLALLLATVVLIVYGGLALYAVSDCGVDEALWLSWTFVADSGSH 240
Query: 332 ADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWS 391
ADRVG G RIVSV+IS+GGMLIFA MLGL+SDAIS+ VDSLRKGKSEV+E NHILILGWS
Sbjct: 241 ADRVGVGARIVSVAISAGGMLIFATMLGLISDAISKMVDSLRKGKSEVLESNHILILGWS 300
Query: 392 DKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILA 451
DKLGSLLKQLA+ANKSIGGGV+VVLAERDKEEME DIAK EFD MGTSVICRSGSPLILA
Sbjct: 301 DKLGSLLKQLAIANKSIGGGVVVVLAERDKEEMETDIAKFEFDLMGTSVICRSGSPLILA 360
Query: 452 DLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLV 511
DLKKVSVS ARAIIVL SDENADQSDARALRVVLSLTGVKEG +GHVVVEM DLDNEPLV
Sbjct: 361 DLKKVSVSNARAIIVLGSDENADQSDARALRVVLSLTGVKEGWKGHVVVEMCDLDNEPLV 420
Query: 512 KLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEE 571
KLVGGE IETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIK+WPQLD FE+
Sbjct: 421 KLVGGERIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKKWPQLDGYCFED 480
Query: 572 VVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEV-VCK 630
V+ISFP+AIPCG+KVAA+G KI+LNP D+YVLKEGDE+LVIAEDDDTYAPG LPEV +C
Sbjct: 481 VLISFPNAIPCGVKVAADG-KIVLNPSDDYVLKEGDEILVIAEDDDTYAPGSLPEVRMCH 539
Query: 631 RSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDG 690
F K+ DPPKYPEKILFCGWRRDIDDMI VLEA LAPGSELWM NEVP++EREKKLTD
Sbjct: 540 --FPKMQDPPKYPEKILFCGWRRDIDDMIKVLEALLAPGSELWMFNEVPDQEREKKLTDA 597
Query: 691 GLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSM 726
GL+IS L+NIKLVHR+GNAVIRRHLESLPLETFDS+
Sbjct: 598 GLNISKLVNIKLVHRQGNAVIRRHLESLPLETFDSI 633
>TAIR|locus:2151276 [details] [associations]
symbol:AT5G02940 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0019252
"starch biosynthetic process" evidence=RCA] InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0009941 EMBL:AL162973 UniGene:At.4984 EMBL:AY048284
EMBL:AY064004 IPI:IPI00533711 PIR:T48315 RefSeq:NP_195914.2
ProteinModelPortal:Q8VZM7 PRIDE:Q8VZM7 EnsemblPlants:AT5G02940.1
GeneID:831426 KEGG:ath:AT5G02940 TAIR:At5g02940
HOGENOM:HOG000083588 InParanoid:Q8VZM7 OMA:ETICNKL PhylomeDB:Q8VZM7
ProtClustDB:CLSN2917732 Genevestigator:Q8VZM7 InterPro:IPR010420
Pfam:PF06241 Uniprot:Q8VZM7
Length = 813
Score = 276 (102.2 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 72/312 (23%), Positives = 158/312 (50%)
Query: 311 DSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVD 370
D+S + LW +W + ++ H ++ R++ ++ G++ ++ +L +++ +
Sbjct: 186 DTSLEDCLWEAWACLVNADTHLEQKTRFERLIGFVLAIWGIVFYSRLLSTMTEQFRYHMK 245
Query: 371 SLRKGKS-EVIEKNHILILGWSDKLGSLLKQL-AVANKSIGGGV-------IVVLAERDK 421
+R+G +V+E +HI+I G + L +LKQL + ++ G ++++++ +
Sbjct: 246 KVREGAHMQVLESDHIIICGINSHLPFILKQLNSYQQHAVRLGTTTARKQTLLLMSDTPR 305
Query: 422 EEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARAL 481
+EM+ DF ++ +S S + ++ + ARAII+L + + + D A
Sbjct: 306 KEMDKLAEAYAKDFDQLDILTKSCSLNMTKSFERAAACMARAIIILPTKGDRYEVDTDAF 365
Query: 482 RVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGL 541
VL+L +++ +VE+S + L+K + G +E V + +L +QC+ Q L
Sbjct: 366 LSVLALEPIQKMESIPTIVEVSSSNMYDLLKSISGLKVEPV--ENSTSKLFVQCSRQKDL 423
Query: 542 AQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNY 601
+I+ +L + F + +P L +++ ++ + F + + CGI GK+ +P+D+
Sbjct: 424 IKIYRHLLNYSKNVFNLCSFPNLTGMKYRQLRLGFQEVVVCGI---LRDGKVNFHPNDDE 480
Query: 602 VLKEGDEVLVIA 613
L E D++L IA
Sbjct: 481 ELMETDKLLFIA 492
Score = 121 (47.7 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 608 EVLVIAEDDDT----YAP--GPLPEVVCK--RSFLKIPDPPKYP-EKILFCGWRRDIDDM 658
E + + E DDT Y L +++ + +S K D K P E IL GWR D+ +M
Sbjct: 506 ENMTVDETDDTRKQVYEEKKSRLEKIITRPSKSLSKGSDSFKGPKESILLLGWRGDVVNM 565
Query: 659 IMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGN 708
I +++L PGS L +L++VP ++R D + + NI++ H GN
Sbjct: 566 IKEFDSYLGPGSSLEILSDVPLEDRRG--VDQSIATGKIKNIQVSHSVGN 613
>TAIR|locus:505006671 [details] [associations]
symbol:AT5G43745 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0009941 EMBL:AB026651 HOGENOM:HOG000083588
ProtClustDB:CLSN2917732 InterPro:IPR010420 Pfam:PF06241
EMBL:AY052350 EMBL:AY059653 EMBL:AY062646 EMBL:AY093257
IPI:IPI00527936 RefSeq:NP_568628.1 UniGene:At.26498
ProteinModelPortal:Q940Y9 PRIDE:Q940Y9 EnsemblPlants:AT5G43745.1
GeneID:834395 KEGG:ath:AT5G43745 TAIR:At5g43745 InParanoid:Q940Y9
OMA:RIAQKIC PhylomeDB:Q940Y9 Genevestigator:Q940Y9 Uniprot:Q940Y9
Length = 817
Score = 285 (105.4 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 79/312 (25%), Positives = 154/312 (49%)
Query: 311 DSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVD 370
D + LW +W + S H + R++ ++ G+L ++ +L +++ +
Sbjct: 190 DLPLEDCLWEAWACLISSSTHLKQKTRIERVIGFVLAIWGILFYSRLLSTMTEQFRYNMT 249
Query: 371 SLRKG-KSEVIEKNHILILGWSDKLGSLLKQL-AVANKSIGGGVIVVLAER-----DKEE 423
LR+G + +V+E +HI+I G + L +LKQL + ++ G +R D
Sbjct: 250 KLREGAQMQVLEADHIIICGINSHLPFILKQLNSYHEHAVRLGTATARKQRLLLMSDTPR 309
Query: 424 MEMD-IAKL-EFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARAL 481
+MD +A+ DF ++ +S S + ++ + S ARAII+L + + + D A
Sbjct: 310 KQMDKLAEAYSKDFNHIDILTKSCSLNLTKSFERAAASMARAIIILPTKGDRYEVDTDAF 369
Query: 482 RVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGL 541
VL+L +++ +VE+S + L+K + G +E V +V +L +QC+ Q L
Sbjct: 370 LSVLALQPIQKMESIPTIVEVSSPNTYDLLKSISGLKVEPV--ENVTSKLFVQCSRQKDL 427
Query: 542 AQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNY 601
+I+ +L + F + +P L ++ ++ + F + + CG+ GK+ +P+DN
Sbjct: 428 IKIYRHLLNYSKNVFNLCSFPNLVGTKYRQLRLGFQEVVVCGL---LRDGKVNFHPNDNE 484
Query: 602 VLKEGDEVLVIA 613
L E D++L IA
Sbjct: 485 ELMETDKLLFIA 496
Score = 108 (43.1 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 630 KRSFLKIPDPPKYP-EKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLT 688
++S K D K P E IL GWR D+ MI + +L PGS + +L++V ++R +++
Sbjct: 541 RKSLSKGSDSVKGPTESILLLGWRGDVVQMIEEFDNYLGPGSSMEILSDVSLEDR-RRVG 599
Query: 689 DGGLDISGLMNIKLVHREGN 708
D + + NI++ H+ GN
Sbjct: 600 DSIGSVK-IKNIQVSHKVGN 618
Score = 47 (21.6 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 585 KVAAEGGKIILNPDDNYVLK--EGDEVLVIAEDDDTYAPGPLPEVV 628
K ++G + P ++ +L GD V +I E D+ PG E++
Sbjct: 542 KSLSKGSDSVKGPTESILLLGWRGDVVQMIEEFDNYLGPGSSMEIL 587
>UNIPROTKB|O27564 [details] [associations]
symbol:mthK "Calcium-gated potassium channel MthK"
species:187420 "Methanothermobacter thermautotrophicus str. Delta
H" [GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR003148 InterPro:IPR006037 Pfam:PF02080 Pfam:PF02254
PROSITE:PS51201 PROSITE:PS51202 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005886 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0046872
GO:GO:0006813 GO:GO:0005216 eggNOG:COG1226 EMBL:AE000666
GenomeReviews:AE000666_GR GO:GO:0008324 KO:K10716
InterPro:IPR013099 Pfam:PF07885 PIR:H69069 RefSeq:NP_276634.1
PDB:1LNQ PDB:2AEF PDB:2AEJ PDB:2AEM PDB:2FY8 PDB:2OGU PDB:3KXD
PDB:3LDC PDB:3LDD PDB:3LDE PDB:3OUS PDB:3R65 PDB:3RBX PDB:3RBZ
PDB:4EI2 PDB:4HYO PDB:4HZ3 PDBsum:1LNQ PDBsum:2AEF PDBsum:2AEJ
PDBsum:2AEM PDBsum:2FY8 PDBsum:2OGU PDBsum:3KXD PDBsum:3LDC
PDBsum:3LDD PDBsum:3LDE PDBsum:3OUS PDBsum:3R65 PDBsum:3RBX
PDBsum:3RBZ PDBsum:4EI2 PDBsum:4HYO PDBsum:4HZ3
ProteinModelPortal:O27564 SMR:O27564 DIP:DIP-37842N STRING:O27564
TCDB:1.A.1.13.2 GeneID:1471789 KEGG:mth:MTH1520 OMA:SETIHCI
ProtClustDB:CLSK2750601 BioCyc:MTHE187420:GJNM-1522-MONOMER
EvolutionaryTrace:O27564 Uniprot:O27564
Length = 336
Score = 117 (46.2 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 42/177 (23%), Positives = 87/177 (49%)
Query: 445 GSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSD 504
G P ++DL+K +V ARA+IV D +SD+ + +L + + E +R ++ E
Sbjct: 162 GDPTRVSDLEKANVRGARAVIV---DL---ESDSETIHCILGIRKIDESVR--IIAEAER 213
Query: 505 LDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGL-AQIWEDILGFENAEFYIKRWPQ 563
+N +++ G + + + + GRLM + ++ G A +D+L E+ ++ P
Sbjct: 214 YENIEQLRMAGAD--QVISPFVISGRLMSR-SIDDGYEAMFVQDVLAEESTRRMVEV-PI 269
Query: 564 LDDLRFEEVVISFPDAIPC-GIKV--AAEGGKIILNPDDNYVLKEGDEVLVIAEDDD 617
+ + E V + D G+ + G ++I++P +Y + GD +L I + ++
Sbjct: 270 PEGSKLEGVSVLDADIHDVTGVIIIGVGRGDELIIDPPRDYSFRAGDIILGIGKPEE 326
Score = 101 (40.6 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 45/174 (25%), Positives = 79/174 (45%)
Query: 306 LYAVSDSSFAEA-LW---LSWTFVADS----GNHADRVGTGPRIVSVSISSGGMLIFAMM 357
+Y + F E W L WTFV + G+++ G +V++ G+ FA+
Sbjct: 32 IYGTAGFHFIEGESWTVSLYWTFVTIATVGYGDYSPSTPLG-MYFTVTLIVLGIGTFAVA 90
Query: 358 LGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLA 417
+ + + + + G +V + H++I GWS+ L++L G + VLA
Sbjct: 91 VERLLEFLINREQMKLMGLIDVAKSRHVVICGWSESTLECLRELR-------GSEVFVLA 143
Query: 418 ERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIV-LASD 470
E E + + + +F+ G P ++DL+K +V ARA+IV L SD
Sbjct: 144 E--DENVRKKVLRSGANFV-------HGDPTRVSDLEKANVRGARAVIVDLESD 188
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 745 694 0.00081 121 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 624 (66 KB)
Total size of DFA: 356 KB (2177 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.96u 0.51s 59.47t Elapsed: 00:00:03
Total cpu time: 58.96u 0.51s 59.47t Elapsed: 00:00:03
Start: Mon May 20 21:37:37 2013 End: Mon May 20 21:37:40 2013