Query 004562
Match_columns 745
No_of_seqs 320 out of 1980
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 01:27:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004562.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004562hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02436 cellulose synthase A 100.0 4E-177 9E-182 1530.8 58.4 710 3-739 269-1071(1094)
2 PLN02400 cellulose synthase 100.0 2E-177 4E-182 1539.9 55.7 711 3-739 260-1061(1085)
3 PLN02638 cellulose synthase A 100.0 3E-177 6E-182 1538.1 56.3 712 2-739 252-1056(1079)
4 PLN02189 cellulose synthase 100.0 2E-176 4E-181 1527.6 56.2 711 2-739 234-1017(1040)
5 PLN02195 cellulose synthase A 100.0 3E-176 6E-181 1519.4 57.1 711 2-739 155-952 (977)
6 PLN02190 cellulose synthase-li 100.0 3E-175 7E-180 1484.3 56.0 704 1-740 5-755 (756)
7 PLN02915 cellulose synthase A 100.0 5E-175 1E-179 1515.7 57.1 713 2-739 190-1021(1044)
8 PLN02248 cellulose synthase-li 100.0 6E-174 1E-178 1507.9 56.2 715 4-739 267-1115(1135)
9 PLN02893 Cellulose synthase-li 100.0 3E-173 7E-178 1476.3 60.3 702 2-744 9-733 (734)
10 PF03552 Cellulose_synt: Cellu 100.0 2E-162 4E-167 1376.9 40.5 622 97-739 1-703 (720)
11 TIGR03030 CelA cellulose synth 100.0 4.1E-73 8.9E-78 672.2 53.5 508 20-723 56-574 (713)
12 PRK11498 bcsA cellulose syntha 100.0 2.6E-73 5.7E-78 671.6 51.4 487 22-722 188-686 (852)
13 PRK05454 glucosyltransferase M 100.0 2E-38 4.4E-43 371.0 52.4 360 19-545 40-420 (691)
14 cd04191 Glucan_BSP_ModH Glucan 100.0 1.1E-36 2.4E-41 319.8 23.0 242 97-497 1-253 (254)
15 PRK14583 hmsR N-glycosyltransf 100.0 8.4E-35 1.8E-39 328.9 39.0 230 91-501 71-306 (444)
16 COG1215 Glycosyltransferases, 100.0 7E-35 1.5E-39 326.7 31.1 233 94-501 53-290 (439)
17 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 2.5E-33 5.3E-38 316.5 36.8 282 91-553 45-341 (439)
18 PRK11204 N-glycosyltransferase 100.0 1.6E-32 3.4E-37 307.6 39.7 230 91-501 50-285 (420)
19 PRK14716 bacteriophage N4 adso 100.0 7.9E-30 1.7E-34 289.7 37.4 265 92-526 63-355 (504)
20 cd06437 CESA_CaSu_A2 Cellulose 100.0 2.6E-30 5.6E-35 265.8 22.9 227 95-495 1-232 (232)
21 cd06421 CESA_CelA_like CESA_Ce 100.0 5.8E-30 1.2E-34 261.5 22.1 229 95-499 1-234 (234)
22 cd06427 CESA_like_2 CESA_like_ 100.0 3.6E-29 7.8E-34 259.4 21.5 232 95-501 1-236 (241)
23 PRK11234 nfrB bacteriophage N4 100.0 4.4E-27 9.5E-32 277.2 36.4 239 88-500 57-334 (727)
24 cd06435 CESA_NdvC_like NdvC_li 100.0 8.1E-28 1.7E-32 247.1 21.3 228 98-500 1-233 (236)
25 PF13641 Glyco_tranf_2_3: Glyc 99.9 1.9E-28 4.2E-33 250.2 8.5 224 95-494 1-228 (228)
26 TIGR03472 HpnI hopanoid biosyn 99.9 9.6E-26 2.1E-30 249.6 26.2 227 92-496 38-273 (373)
27 cd04190 Chitin_synth_C C-termi 99.9 1.8E-26 3.9E-31 240.6 14.7 171 270-497 64-243 (244)
28 cd02520 Glucosylceramide_synth 99.9 3.8E-25 8.3E-30 222.2 17.2 193 95-494 1-195 (196)
29 cd06439 CESA_like_1 CESA_like_ 99.9 3.5E-24 7.6E-29 222.2 21.0 226 90-498 24-251 (251)
30 cd04192 GT_2_like_e Subfamily 99.9 3.4E-24 7.3E-29 217.6 20.3 221 99-494 1-229 (229)
31 cd06434 GT2_HAS Hyaluronan syn 99.9 4.9E-24 1.1E-28 218.4 20.8 229 96-497 1-234 (235)
32 PRK15489 nfrB bacteriophage N4 99.9 2.4E-22 5.2E-27 234.6 34.6 236 91-499 67-341 (703)
33 TIGR03469 HonB hopene-associat 99.9 8.4E-22 1.8E-26 219.1 31.6 230 91-493 36-280 (384)
34 COG2943 MdoH Membrane glycosyl 99.9 5.5E-19 1.2E-23 193.1 45.9 270 94-528 143-423 (736)
35 cd02525 Succinoglycan_BP_ExoA 99.9 2.4E-20 5.1E-25 191.8 20.1 225 96-501 1-233 (249)
36 cd06438 EpsO_like EpsO protein 99.8 2.6E-19 5.7E-24 177.7 13.5 161 99-371 1-167 (183)
37 cd06436 GlcNAc-1-P_transferase 99.8 7.7E-19 1.7E-23 176.1 15.1 164 99-371 1-175 (191)
38 PF13632 Glyco_trans_2_3: Glyc 99.7 1.2E-17 2.6E-22 166.9 13.0 137 286-495 1-143 (193)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.7 4.2E-17 9.2E-22 163.0 16.6 193 95-468 1-195 (202)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.7 2.4E-16 5.2E-21 157.6 17.7 188 98-468 1-195 (201)
41 cd06433 GT_2_WfgS_like WfgS an 99.7 1.2E-15 2.6E-20 150.9 15.7 186 98-468 1-188 (202)
42 cd02510 pp-GalNAc-T pp-GalNAc- 99.7 1.5E-15 3.3E-20 162.9 17.2 110 98-311 1-110 (299)
43 PLN02726 dolichyl-phosphate be 99.7 6.6E-15 1.4E-19 153.1 20.5 123 93-324 7-129 (243)
44 cd04196 GT_2_like_d Subfamily 99.6 4.4E-15 9.5E-20 149.1 16.4 161 98-371 1-164 (214)
45 cd02522 GT_2_like_a GT_2_like_ 99.6 1.7E-14 3.6E-19 146.3 16.6 178 97-465 1-178 (221)
46 cd06420 GT2_Chondriotin_Pol_N 99.6 2.3E-14 5.1E-19 140.7 17.0 104 99-309 1-104 (182)
47 cd06442 DPM1_like DPM1_like re 99.6 4.9E-14 1.1E-18 143.1 19.8 114 99-324 1-114 (224)
48 cd06913 beta3GnTL1_like Beta 1 99.6 5.3E-14 1.2E-18 143.4 19.6 111 99-311 1-111 (219)
49 PRK10073 putative glycosyl tra 99.6 2.7E-14 5.9E-19 155.8 17.0 109 94-312 5-113 (328)
50 cd04186 GT_2_like_c Subfamily 99.6 2.2E-14 4.8E-19 137.6 14.5 157 99-468 1-159 (166)
51 PF13506 Glyco_transf_21: Glyc 99.5 4.2E-14 9.2E-19 140.8 13.3 153 264-493 15-175 (175)
52 cd04185 GT_2_like_b Subfamily 99.5 1.9E-13 4.2E-18 137.0 16.7 113 99-322 1-113 (202)
53 cd06423 CESA_like CESA_like is 99.5 6.6E-14 1.4E-18 133.5 12.4 160 99-371 1-166 (180)
54 cd04188 DPG_synthase DPG_synth 99.5 4.7E-13 1E-17 135.6 17.2 108 99-313 1-111 (211)
55 PF03142 Chitin_synth_2: Chiti 99.5 6.4E-12 1.4E-16 143.1 27.6 167 283-500 201-379 (527)
56 PRK10018 putative glycosyl tra 99.5 5.5E-13 1.2E-17 142.4 16.8 109 93-310 3-111 (279)
57 cd02526 GT2_RfbF_like RfbF is 99.5 1.5E-13 3.2E-18 141.0 11.9 142 251-468 49-198 (237)
58 PRK10063 putative glycosyl tra 99.5 1.2E-12 2.7E-17 137.3 18.1 49 95-147 1-50 (248)
59 PF00535 Glycos_transf_2: Glyc 99.5 6.3E-14 1.4E-18 133.6 6.3 163 98-371 1-165 (169)
60 PTZ00260 dolichyl-phosphate be 99.4 2.5E-11 5.5E-16 132.9 24.1 128 92-323 67-200 (333)
61 cd04179 DPM_DPG-synthase_like 99.4 1.9E-12 4.1E-17 127.3 12.7 120 99-329 1-120 (185)
62 TIGR01556 rhamnosyltran L-rham 99.3 2.7E-11 5.8E-16 128.7 13.8 145 249-468 45-195 (281)
63 PRK13915 putative glucosyl-3-p 99.3 1.2E-10 2.6E-15 126.1 17.1 124 92-323 28-152 (306)
64 cd04187 DPM1_like_bac Bacteria 99.3 7.3E-11 1.6E-15 116.4 13.9 50 250-309 56-105 (181)
65 PRK10714 undecaprenyl phosphat 99.2 3.3E-09 7.1E-14 115.9 23.3 111 94-310 5-116 (325)
66 PF10111 Glyco_tranf_2_2: Glyc 99.2 6.4E-10 1.4E-14 118.8 16.9 134 265-468 74-216 (281)
67 cd00761 Glyco_tranf_GTA_type G 99.2 6E-10 1.3E-14 103.5 14.4 113 99-324 1-114 (156)
68 COG1216 Predicted glycosyltran 99.1 2.2E-09 4.7E-14 116.0 18.8 121 94-326 2-123 (305)
69 KOG2571 Chitin synthase/hyalur 99.1 3.8E-09 8.1E-14 124.7 18.1 167 266-494 425-596 (862)
70 COG0463 WcaA Glycosyltransfera 98.8 3.5E-08 7.5E-13 94.3 12.0 47 94-146 2-48 (291)
71 cd02511 Beta4Glucosyltransfera 98.8 4.6E-08 9.9E-13 101.1 12.6 44 264-312 56-99 (229)
72 KOG2547 Ceramide glucosyltrans 98.7 1.5E-07 3.2E-12 101.0 12.3 153 264-493 155-314 (431)
73 KOG2977 Glycosyltransferase [G 98.0 3.1E-05 6.6E-10 81.1 10.7 129 96-329 68-204 (323)
74 cd02514 GT13_GLCNAC-TI GT13_GL 98.0 6.2E-05 1.3E-09 82.3 12.4 44 97-144 2-45 (334)
75 KOG2978 Dolichol-phosphate man 97.9 0.0002 4.4E-09 70.9 14.1 60 250-323 64-123 (238)
76 KOG3737 Predicted polypeptide 97.0 0.0014 3E-08 71.3 6.4 49 91-142 151-199 (603)
77 KOG3738 Predicted polypeptide 95.9 0.022 4.8E-07 62.5 7.8 49 92-143 121-169 (559)
78 PF02364 Glucan_synthase: 1,3- 95.5 0.26 5.6E-06 59.4 15.2 74 444-522 408-482 (817)
79 PF13704 Glyco_tranf_2_4: Glyc 95.3 0.042 9E-07 48.8 6.1 35 107-146 1-35 (97)
80 KOG3736 Polypeptide N-acetylga 94.6 0.028 6E-07 65.6 3.8 48 92-142 139-186 (578)
81 PF13712 Glyco_tranf_2_5: Glyc 92.6 0.33 7.1E-06 50.3 7.2 49 265-321 40-89 (217)
82 PF03071 GNT-I: GNT-I family; 90.3 1.9 4.2E-05 49.0 10.7 49 92-145 90-139 (434)
83 COG4092 Predicted glycosyltran 89.6 4.2 9.1E-05 43.1 11.6 81 248-331 61-142 (346)
84 PF03452 Anp1: Anp1; InterPro 87.5 7.8 0.00017 41.5 12.3 56 92-151 22-79 (269)
85 TIGR02460 osmo_MPGsynth mannos 85.4 5.8 0.00013 43.6 10.1 41 264-307 141-181 (381)
86 PRK14503 mannosyl-3-phosphogly 85.2 5.9 0.00013 43.8 10.1 43 264-309 142-184 (393)
87 PF09488 Osmo_MPGsynth: Mannos 81.7 7.7 0.00017 42.9 9.3 40 264-306 141-180 (381)
88 KOG0916 1,3-beta-glucan syntha 81.5 2.4 5.3E-05 53.5 6.0 71 444-519 1172-1243(1679)
89 PF01644 Chitin_synth_1: Chiti 79.6 19 0.00042 35.7 10.5 39 107-145 2-54 (163)
90 cd00899 b4GalT Beta-4-Galactos 79.0 10 0.00022 39.5 8.8 53 447-499 138-200 (219)
91 PRK14502 bifunctional mannosyl 76.8 15 0.00033 44.3 10.5 41 264-307 146-186 (694)
92 PF13896 Glyco_transf_49: Glyc 57.1 14 0.0003 40.6 4.7 46 271-321 119-164 (317)
93 PF05679 CHGN: Chondroitin N-a 51.6 1.4E+02 0.003 35.0 11.9 47 251-305 316-362 (499)
94 PRK09382 ispDF bifunctional 2- 49.1 41 0.00088 37.9 6.8 40 267-310 83-122 (378)
95 TIGR03584 PseF pseudaminic aci 48.6 2.2E+02 0.0048 29.3 11.7 59 265-323 76-134 (222)
96 PF02709 Glyco_transf_7C: N-te 37.3 31 0.00067 29.8 2.7 22 447-468 46-67 (78)
97 PF11316 Rhamno_transf: Putati 35.8 3.6E+02 0.0078 28.4 10.9 55 248-310 84-140 (234)
98 cd04182 GT_2_like_f GT_2_like_ 29.5 1.5E+02 0.0032 28.6 6.6 44 264-310 73-117 (186)
99 PF02434 Fringe: Fringe-like; 28.7 1.6E+02 0.0036 31.1 7.1 30 282-313 85-114 (252)
100 TIGR02665 molyb_mobA molybdopt 28.3 1.8E+02 0.0038 28.5 6.9 42 264-310 72-114 (186)
101 PF06306 CgtA: Beta-1,4-N-acet 28.0 2E+02 0.0043 31.8 7.5 35 264-302 159-193 (347)
102 COG3548 Predicted integral mem 27.3 7E+02 0.015 25.7 12.4 74 661-738 49-130 (197)
103 cd02540 GT2_GlmU_N_bac N-termi 26.5 2.2E+02 0.0047 28.7 7.4 45 264-311 72-117 (229)
104 PF06638 Strabismus: Strabismu 26.2 2.3E+02 0.005 33.0 8.0 83 657-743 88-182 (505)
105 cd02503 MobA MobA catalyzes th 26.1 2.2E+02 0.0047 27.7 7.1 42 264-309 68-109 (181)
106 PF04724 Glyco_transf_17: Glyc 25.3 1.8E+02 0.0039 32.6 6.9 36 267-304 163-198 (356)
107 PRK02726 molybdopterin-guanine 21.6 3.1E+02 0.0068 27.6 7.4 42 265-310 78-119 (200)
108 TIGR03310 matur_ygfJ molybdenu 21.4 2.3E+02 0.005 27.5 6.3 43 265-310 74-116 (188)
109 KOG4179 Lysyl hydrolase/glycos 21.3 3.3E+02 0.0072 31.1 7.7 36 267-307 98-133 (568)
No 1
>PLN02436 cellulose synthase A
Probab=100.00 E-value=4.2e-177 Score=1530.77 Aligned_cols=710 Identities=33% Similarity=0.646 Sum_probs=656.1
Q ss_pred CCCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 004562 3 SPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (745)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r 81 (745)
..+|||++++.+++. .+||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 269 ~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~----~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R 344 (1094)
T PLN02436 269 GRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVN----DAYGLWLTSVICEIWFAVSWILDQFPKWYPIER 344 (1094)
T ss_pred cCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc----ccHHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 478899999999874 469999999999999999999998543 468999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHh
Q 004562 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRF 154 (745)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~f 154 (745)
.+++++|.+ +++||.||||||||||++|||.+++|||+|+||+|||.|||.|||+|||++.+|+++|.||++|
T Consensus 345 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 424 (1094)
T PLN02436 345 ETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEF 424 (1094)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHH
Confidence 999998863 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-CC---------------C
Q 004562 155 AKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-GE---------------Y 217 (745)
Q Consensus 155 a~~wvpfc~k~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-~~---------------~ 217 (745)
||+||||||||+|||||||+||+.+ +..+++..++|++||++||++|||||+|||.+.+. +. +
T Consensus 425 Ak~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g 504 (1094)
T PLN02436 425 ARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPG 504 (1094)
T ss_pred HHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCC
Confidence 9999999999999999999999998 55677778999999999999999999999998653 11 4
Q ss_pred CCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004562 218 GNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (745)
Q Consensus 218 ~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~ 297 (745)
.+++|||+||||++++++.. |.++.++|+++||+|||||+++||+||||||+++|+||+|||||||||+|||||+|
T Consensus 505 ~~~~dHp~IIqVll~~~~~~----d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiN 580 (1094)
T PLN02436 505 NNVRDHPGMIQVFLGHSGVR----DVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYIN 580 (1094)
T ss_pred CCCCCCccceEEEecCCCCc----ccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccC
Confidence 58899999999999987643 55778899999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccC-Ccc
Q 004562 298 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFK 376 (745)
Q Consensus 298 ~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~ 376 (745)
||+++|++||||+||+.++++||||+||+|+|.+++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| .|+
T Consensus 581 ns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp 660 (1094)
T PLN02436 581 NSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAP 660 (1094)
T ss_pred chHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 543
Q ss_pred ccc----------------------------------------------------------------cchHhhhhhhCCc
Q 004562 377 HKG----------------------------------------------------------------IDLAELKDTFGES 392 (745)
Q Consensus 377 ~~~----------------------------------------------------------------~d~~~~~~~~~~~ 392 (745)
... .+.+.++++||+|
T Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S 740 (1094)
T PLN02436 661 KKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQS 740 (1094)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhccc
Confidence 100 0012355789999
Q ss_pred hhHHhhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCe
Q 004562 393 NLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQ 472 (745)
Q Consensus 393 ~~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~ 472 (745)
.+|++|+..+... .+....+++++++|++|++|.||++|+||+++||.|+|+|||+.||++||++||||+||+|++++
T Consensus 741 ~~fi~S~~~~~~~--~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~A 818 (1094)
T PLN02436 741 PVFVASTLLENGG--VPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPA 818 (1094)
T ss_pred HHHHHHHHHhhcC--CCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchh
Confidence 9999999888732 33333567899999999999999999999999999999999999999999999999999887789
Q ss_pred eEeccCCChHHHHhHhHHhhcccccccccccCccccCC-CCCChhHHHHHHHHhHhhHhhHHHHHHHHHHhHHHHhcCCC
Q 004562 473 FLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGP-SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIP 551 (745)
Q Consensus 473 ~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~r~~pl~~~~-~~l~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~l~Ll~g~~ 551 (745)
|.|+||+|+.+++.||+|||+|++||+++|+||++++. ++|+++||++|+++++|| ++++|.++|+++|++||++|++
T Consensus 819 F~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~-l~Slp~liY~~lP~l~LL~G~~ 897 (1094)
T PLN02436 819 FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYP-WTSIPLIVYCTLPAICLLTGKF 897 (1094)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCe
Confidence 99999999999999999999999999999999999763 689999999999999999 9999999999999999999999
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhCccccchhchhhhHHhHhHHHHHHHHHHHHHHHHcCCCCC
Q 004562 552 LYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKAS 631 (745)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~ 631 (745)
++|+ ++.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.++++++++++++++|+||+++++
T Consensus 898 i~P~---------vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~ 968 (1094)
T PLN02436 898 IVPE---------ISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTN 968 (1094)
T ss_pred ecCc---------cchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCccc
Confidence 9998 7888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCcchhhhcccccceeecccchhHHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHH
Q 004562 632 FLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIV 709 (745)
Q Consensus 632 F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~g--~~~~~~~~~~~~~~~~~~~~p~~ 709 (745)
|.||+|..+++. .+++|+|+ ++++++|+++++++|++|+++|+.+++.+| .|+++++++|+++|+++++|||+
T Consensus 969 F~VTsK~~d~~~----~a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~ 1043 (1094)
T PLN02436 969 FTVTSKAADDGE----FSELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFL 1043 (1094)
T ss_pred ceeccccccccc----ccceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 999999876432 23688999 899999999999999999999999998755 68999999999999999999999
Q ss_pred HHHhhhcCCCCCchhHHHHHHHHHHHHHHh
Q 004562 710 EGMIVRKDKGRISPSAILLSSVFFVTFLFF 739 (745)
Q Consensus 710 ~~l~~r~~~~~~p~~~~~~~~~~~~~~~~~ 739 (745)
+||++| ++++|+++++||++|+++|+++
T Consensus 1044 kgL~gr--~~r~P~~v~v~s~lla~~~~l~ 1071 (1094)
T PLN02436 1044 KGLLGK--QDRMPTIILVWSILLASILTLL 1071 (1094)
T ss_pred HHHhcc--CCCCCeeehHHHHHHHHHHHHH
Confidence 999954 5599999999999999999986
No 2
>PLN02400 cellulose synthase
Probab=100.00 E-value=2.1e-177 Score=1539.92 Aligned_cols=711 Identities=32% Similarity=0.642 Sum_probs=657.7
Q ss_pred CCCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 004562 3 SPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (745)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r 81 (745)
..+|||++++.++++ .+||+++++++++++++|+||++|..+ ++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 260 ~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~----~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R 335 (1085)
T PLN02400 260 ARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVK----DAYGLWLTSVICEIWFALSWLLDQFPKWYPINR 335 (1085)
T ss_pred ccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc----ccHHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 368899999998874 679999999999999999999998543 468999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHh
Q 004562 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRF 154 (745)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~f 154 (745)
.+++++|.+ +++||.|||||||+||++|||.+++|||+|+||+|||.|||.|||+|||++.+|+++|.||++|
T Consensus 336 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~F 415 (1085)
T PLN02400 336 ETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEF 415 (1085)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHH
Confidence 999998863 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhh-------hcCC---------C
Q 004562 155 AKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAV-------EDGE---------Y 217 (745)
Q Consensus 155 a~~wvpfc~k~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~-------~~~~---------~ 217 (745)
||+||||||||+|||||||+||+.+ +..+++..|+|++||++||++|||||+|||.+. ++|+ +
T Consensus 416 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g 495 (1085)
T PLN02400 416 ARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPWPG 495 (1085)
T ss_pred HHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCccCCC
Confidence 9999999999999999999999998 556677889999999999999999999999875 2221 4
Q ss_pred CCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004562 218 GNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (745)
Q Consensus 218 ~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~ 297 (745)
.+++|||+||||+++++++. |.++.++|+|+||+|||||+++||+||||||+++|+||+|||||||||+|||||+|
T Consensus 496 ~~~~dHp~iIqVll~~~~~~----d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~N 571 (1085)
T PLN02400 496 NNPRDHPGMIQVFLGHSGGL----DTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFN 571 (1085)
T ss_pred CCCCCCchhhhhhhcCCCCc----ccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccC
Confidence 58899999999999987653 45677899999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccC-Ccc
Q 004562 298 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFK 376 (745)
Q Consensus 298 ~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~ 376 (745)
||+++|++||||+||+.++++||||+||+|+|.+++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| .|+
T Consensus 572 ns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~~p~ 651 (1085)
T PLN02400 572 NSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPV 651 (1085)
T ss_pred CchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 442
Q ss_pred cc-----c---------------------------------------------------------cchHhhhhhhCCchh
Q 004562 377 HK-----G---------------------------------------------------------IDLAELKDTFGESNL 394 (745)
Q Consensus 377 ~~-----~---------------------------------------------------------~d~~~~~~~~~~~~~ 394 (745)
.. . .+.++++++||+|.+
T Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~ 731 (1085)
T PLN02400 652 LTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPV 731 (1085)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccccHH
Confidence 00 0 001235678999999
Q ss_pred HHhhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeE
Q 004562 395 FIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFL 474 (745)
Q Consensus 395 ~v~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~ 474 (745)
||+|+..+. ...++...+++++++|++|+||.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++++.
T Consensus 732 fi~S~~~~~--~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~ 809 (1085)
T PLN02400 732 FIAATFMEQ--GGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFK 809 (1085)
T ss_pred HHHHHHHHh--cCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhc
Confidence 999998553 222334456889999999999999999999999999999999999999999999999999998889999
Q ss_pred eccCCChHHHHhHhHHhhcccccccccccCccccC-CCCCChhHHHHHHHHhHhhHhhHHHHHHHHHHhHHHHhcCCCcc
Q 004562 475 GTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLY 553 (745)
Q Consensus 475 g~aP~~l~~~l~Qr~RWa~G~~qi~~~r~~pl~~~-~~~l~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~l~Ll~g~~~~ 553 (745)
|+||+|+.+++.||+|||+|++||+++|+||++++ .++|++.||++|+++++|| ++++|+++|+++|++||++|++++
T Consensus 810 GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~-~~slp~liY~llP~l~LltG~~i~ 888 (1085)
T PLN02400 810 GSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYP-ITSIPLLAYCVLPAFCLITNKFII 888 (1085)
T ss_pred CcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCccC
Confidence 99999999999999999999999999999999976 3789999999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhCccccchhchhhhHHhHhHHHHHHHHHHHHHHHHcCCCCCee
Q 004562 554 PETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFL 633 (745)
Q Consensus 554 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~ 633 (745)
|. ++++++++|+++|+++++++++|++|+|.++++|||+||+|+|.++++++++++++++|+||+++++|.
T Consensus 889 P~---------vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~ 959 (1085)
T PLN02400 889 PE---------ISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFT 959 (1085)
T ss_pred Cc---------cchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccce
Confidence 98 788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCcchhhhcccccceeecccchhHHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHHHH
Q 004562 634 PTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEG 711 (745)
Q Consensus 634 VT~K~~~~~~~~~y~~~~~~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~g--~~~~~~~~~~~~~~~~~~~~p~~~~ 711 (745)
||+|..+++.. .+|+|+|+ ++++++|+++++++|++|+++|+++++.+| .|+++++++|+++|+++++|||++|
T Consensus 960 VTsK~~d~~~~---~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~kg 1035 (1085)
T PLN02400 960 VTSKASDEDGD---FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKG 1035 (1085)
T ss_pred ecCCccccccc---ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998765431 35899999 899999999999999999999999998755 6899999999999999999999999
Q ss_pred HhhhcCCCCCchhHHHHHHHHHHHHHHh
Q 004562 712 MIVRKDKGRISPSAILLSSVFFVTFLFF 739 (745)
Q Consensus 712 l~~r~~~~~~p~~~~~~~~~~~~~~~~~ 739 (745)
|++|+ +++|+++++||++|+++|+++
T Consensus 1036 L~gR~--~r~P~~v~~~s~lla~~~~l~ 1061 (1085)
T PLN02400 1036 LLGRQ--NRTPTIVIVWSILLASIFSLL 1061 (1085)
T ss_pred HhccC--CCCceeHHHHHHHHHHHHHHH
Confidence 99887 899999999999999999986
No 3
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=2.9e-177 Score=1538.06 Aligned_cols=712 Identities=33% Similarity=0.647 Sum_probs=659.2
Q ss_pred CCCCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 004562 2 ESPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVS 80 (745)
Q Consensus 2 ~~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~ 80 (745)
++.+|||++++.+++. .+||+++++++++++++|+||++|.. .++.|+|+++++||+||+|+|+|+|+.||+|++
T Consensus 252 ~~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~ 327 (1079)
T PLN02638 252 EARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV----RNAYALWLISVICEIWFALSWILDQFPKWLPVN 327 (1079)
T ss_pred cCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 4578899999999874 67999999999999999999999854 356899999999999999999999999999999
Q ss_pred ccCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHH
Q 004562 81 RTVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFR 153 (745)
Q Consensus 81 r~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~ 153 (745)
|.+++++|.+ +++||.||||||||||++|||.+++|||+|+||+|||.|||.|||+|||++.+|+++|.||++
T Consensus 328 R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~ 407 (1079)
T PLN02638 328 RETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSE 407 (1079)
T ss_pred cccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHH
Confidence 9999998864 246999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------
Q 004562 154 FAKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-------GE--------- 216 (745)
Q Consensus 154 fa~~wvpfc~k~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-------~~--------- 216 (745)
|||+||||||||+|||||||+||+.+ +..+++..++|++||++||++|||||+|||.+.++ |+
T Consensus 408 FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~ 487 (1079)
T PLN02638 408 FARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWP 487 (1079)
T ss_pred HHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCC
Confidence 99999999999999999999999998 55677888999999999999999999999987521 11
Q ss_pred CCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 004562 217 YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC 296 (745)
Q Consensus 217 ~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~ 296 (745)
+.+++|||+||||+++++++. |.++.++|+|+||+||||||++||+||||||+++|+||+|||||||||+||||++
T Consensus 488 g~~~~dHp~IiqVll~~~~~~----d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYi 563 (1079)
T PLN02638 488 GNNTRDHPGMIQVFLGHSGGL----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYI 563 (1079)
T ss_pred CCCCCCCHHHHHHHhcCCCcc----ccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCccc
Confidence 457899999999999987653 4567789999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccC-Cc
Q 004562 297 NDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NF 375 (745)
Q Consensus 297 ~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~ 375 (745)
|||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||+++++|+||+|||+||||||+|||+|||| +|
T Consensus 564 Nns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p 643 (1079)
T PLN02638 564 NNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEP 643 (1079)
T ss_pred CchHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 55
Q ss_pred cccc--------------------------c-------------------------------ch-------HhhhhhhCC
Q 004562 376 KHKG--------------------------I-------------------------------DL-------AELKDTFGE 391 (745)
Q Consensus 376 ~~~~--------------------------~-------------------------------d~-------~~~~~~~~~ 391 (745)
+... . +. ..++++||+
T Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~ 723 (1079)
T PLN02638 644 PIKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQ 723 (1079)
T ss_pred cccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccc
Confidence 3210 0 00 134578999
Q ss_pred chhHHhhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCC
Q 004562 392 SNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRP 471 (745)
Q Consensus 392 ~~~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~ 471 (745)
|.+||+|+..+..+.. +..++++++++|++|++|.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++
T Consensus 724 S~~fi~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~ 801 (1079)
T PLN02638 724 SAVFVASTLMENGGVP--QSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRP 801 (1079)
T ss_pred cHHHHHHHHHhhcCCC--CCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCch
Confidence 9999999987774322 33456889999999999999999999999999999999999999999999999999987788
Q ss_pred eeEeccCCChHHHHhHhHHhhcccccccccccCccccC-CCCCChhHHHHHHHHhHhhHhhHHHHHHHHHHhHHHHhcCC
Q 004562 472 QFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGI 550 (745)
Q Consensus 472 ~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~r~~pl~~~-~~~l~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~l~Ll~g~ 550 (745)
++.|+||+|+.+++.||+|||+|++||+++|+||++++ .++|++.||++|+++++|| ++++|.++|+++|++||++|+
T Consensus 802 AF~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp-~~sip~liY~llP~l~Ll~G~ 880 (1079)
T PLN02638 802 AFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYP-ITSIPLLLYCTLPAVCLLTGK 880 (1079)
T ss_pred HhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999976 3789999999999999999 999999999999999999999
Q ss_pred CccccccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhCccccchhchhhhHHhHhHHHHHHHHHHHHHHHHcCCCC
Q 004562 551 PLYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKA 630 (745)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~ 630 (745)
+++|+ ++.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.++++++++++++++|+||++++
T Consensus 881 ~i~P~---------vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~ 951 (1079)
T PLN02638 881 FIIPQ---------ISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDT 951 (1079)
T ss_pred ccCCC---------ccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcc
Confidence 99997 788888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeCCCCCcchhhhcccccceeecccchhHHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHH
Q 004562 631 SFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAI 708 (745)
Q Consensus 631 ~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~g--~~~~~~~~~~~~~~~~~~~~p~ 708 (745)
+|.||+|..++++. ++|+|+|+ ++++++|.++++++|++|+++|+++++.+| .|+++++++|+++|+++++|||
T Consensus 952 ~F~VTsK~~d~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf 1027 (1079)
T PLN02638 952 NFTVTSKASDEDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPF 1027 (1079)
T ss_pred cceecccccccccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHH
Confidence 99999998765432 36899999 899999999999999999999999998755 6899999999999999999999
Q ss_pred HHHHhhhcCCCCCchhHHHHHHHHHHHHHHh
Q 004562 709 VEGMIVRKDKGRISPSAILLSSVFFVTFLFF 739 (745)
Q Consensus 709 ~~~l~~r~~~~~~p~~~~~~~~~~~~~~~~~ 739 (745)
++||++|| +|+|+++++||++|+++|+++
T Consensus 1028 ~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~ 1056 (1079)
T PLN02638 1028 LKGLMGRQ--NRTPTIVVVWSILLASIFSLL 1056 (1079)
T ss_pred HHHHhccC--CCCCeeehHHHHHHHHHHHHH
Confidence 99999997 788999999999999999985
No 4
>PLN02189 cellulose synthase
Probab=100.00 E-value=1.8e-176 Score=1527.63 Aligned_cols=711 Identities=33% Similarity=0.651 Sum_probs=657.1
Q ss_pred CCCCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 004562 2 ESPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVS 80 (745)
Q Consensus 2 ~~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~ 80 (745)
+..+|||++++.+++. ++||+++++++++++++++||++|..+ ++.|+|+++++||+||+|+|+|+|+.||+|++
T Consensus 234 ~~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~----~~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~ 309 (1040)
T PLN02189 234 EARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVH----DAIGLWLTSIICEIWFAVSWILDQFPKWFPID 309 (1040)
T ss_pred cCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcCc----cchHHHHHHHHHHHHHHHHHHHccCccccccc
Confidence 4578999999999874 469999999999999999999998542 35899999999999999999999999999999
Q ss_pred ccCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHH
Q 004562 81 RTVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFR 153 (745)
Q Consensus 81 r~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~ 153 (745)
|.+++++|.+ +++||.||||||||||++|||.+++|||+|+||+|||.|||.|||+|||++.+|+++|.||++
T Consensus 310 R~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~ 389 (1040)
T PLN02189 310 RETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAE 389 (1040)
T ss_pred ceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHH
Confidence 9999998864 234999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------
Q 004562 154 FAKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-------GE--------- 216 (745)
Q Consensus 154 fa~~wvpfc~k~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-------~~--------- 216 (745)
|||+||||||||+|||||||+||+.+ +..+++..++|++||+.||++|||||+||+.+.++ ++
T Consensus 390 FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~ 469 (1040)
T PLN02189 390 FARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWP 469 (1040)
T ss_pred HHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCC
Confidence 99999999999999999999999998 55677888999999999999999999999987521 11
Q ss_pred CCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 004562 217 YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC 296 (745)
Q Consensus 217 ~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~ 296 (745)
+.+++|||+|+||+++++++. |.++.++|+++||+||||||++||+||||||+++|+||+|||||||||+||||++
T Consensus 470 g~~~~dHp~IiQVll~~~~~~----d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~ 545 (1040)
T PLN02189 470 GNNTRDHPGMIQVFLGHSGGH----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYI 545 (1040)
T ss_pred CCCCCCCHHHHHHHhcCCCCc----cccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCcccc
Confidence 457899999999999987653 4567789999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccC-Cc
Q 004562 297 NDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NF 375 (745)
Q Consensus 297 ~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~ 375 (745)
|||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||+++++|+||+|||+||||||+|||+|||| .|
T Consensus 546 Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p 625 (1040)
T PLN02189 546 NNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDP 625 (1040)
T ss_pred CchHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 55
Q ss_pred ccc-------------------cc------------------------chHhhhhhhCCchhHHhhhhhhccccccCCcc
Q 004562 376 KHK-------------------GI------------------------DLAELKDTFGESNLFIKSLHQSYEHKNVNGEN 412 (745)
Q Consensus 376 ~~~-------------------~~------------------------d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~ 412 (745)
... .. ...+++++||+|.+|++|+..+... .+...
T Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~--~~~~~ 703 (1040)
T PLN02189 626 PKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGG--VPPSS 703 (1040)
T ss_pred ccccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcC--CCCCC
Confidence 311 00 0134567899999999999877422 23334
Q ss_pred chhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHHhh
Q 004562 413 LSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWA 492 (745)
Q Consensus 413 ~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~RWa 492 (745)
.+++++++|++|++|.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++++.|+||+|+.+++.||+|||
T Consensus 704 ~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA 783 (1040)
T PLN02189 704 SPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWA 783 (1040)
T ss_pred CcHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHh
Confidence 56789999999999999999999999999999999999999999999999999998789999999999999999999999
Q ss_pred cccccccccccCccccCC--CCCChhHHHHHHHHhHhhHhhHHHHHHHHHHhHHHHhcCCCccccccccccCCCCchhHH
Q 004562 493 SGLIDVSISRFCPLLYGP--SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFF 570 (745)
Q Consensus 493 ~G~~qi~~~r~~pl~~~~--~~l~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~l~Ll~g~~~~~~~~~~~~~~~~~~~~f 570 (745)
+|++||+++|+||++++. ++|++.||++|+++++|| ++++|.++|+++|++||++|++++|+ ++.+++
T Consensus 784 ~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~-~~sip~liY~~lP~l~Ll~g~~i~p~---------vs~~~~ 853 (1040)
T PLN02189 784 LGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYP-FTSLPLLAYCTLPAICLLTGKFIMPP---------ISTFAS 853 (1040)
T ss_pred hhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCcccCc---------cchHHH
Confidence 999999999999999763 679999999999999999 99999999999999999999999998 788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCccccchhchhhhHHhHhHHHHHHHHHHHHHHHHcCCCCCeeeCCCCCcchhhhccccc
Q 004562 571 MVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMG 650 (745)
Q Consensus 571 ~~~~~~~~~~~~~~~l~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~~ 650 (745)
++|+++|+.+++++++|++|+|.+.++|||+||+|+|.++++++++++++++|+||+++++|+||+|..+++. .+|
T Consensus 854 ~~fi~lf~~~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~~----~~~ 929 (1040)
T PLN02189 854 LFFIALFMSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDE----FGE 929 (1040)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceeccccccccc----ccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999876543 248
Q ss_pred ceeecccchhHHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHH
Q 004562 651 QFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILL 728 (745)
Q Consensus 651 ~~~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~g--~~~~~~~~~~~~~~~~~~~~p~~~~l~~r~~~~~~p~~~~~~ 728 (745)
+|+|+ ++++++|.++++++|++|+++|+++++.+| .|+++++++|+++|+++++|||++||++|| +|+|+++++|
T Consensus 930 ly~f~-~s~l~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~ 1006 (1040)
T PLN02189 930 LYAFK-WTTLLIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVIW 1006 (1040)
T ss_pred ceeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHH
Confidence 99999 899999999999999999999999998755 689999999999999999999999999997 7889999999
Q ss_pred HHHHHHHHHHh
Q 004562 729 SSVFFVTFLFF 739 (745)
Q Consensus 729 ~~~~~~~~~~~ 739 (745)
|++|+++|+++
T Consensus 1007 s~ll~~~~~l~ 1017 (1040)
T PLN02189 1007 SVLLASIFSLL 1017 (1040)
T ss_pred HHHHHHHHHHH
Confidence 99999999985
No 5
>PLN02195 cellulose synthase A
Probab=100.00 E-value=2.7e-176 Score=1519.39 Aligned_cols=711 Identities=33% Similarity=0.634 Sum_probs=656.4
Q ss_pred CCCCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 004562 2 ESPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVS 80 (745)
Q Consensus 2 ~~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~ 80 (745)
|..+|||++++.+++. ++||+++++++++++++++||++|..+ ++.|+|+++++||+||+|+|+|+|+.||+|++
T Consensus 155 ~~~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~----~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~ 230 (977)
T PLN02195 155 DAYEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVD----SAFGLWLTSVICEIWFAFSWVLDQFPKWSPIN 230 (977)
T ss_pred cccCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCccc----cchHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 4578999999999874 479999999999999999999988543 45699999999999999999999999999999
Q ss_pred ccCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHH
Q 004562 81 RTVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFR 153 (745)
Q Consensus 81 r~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~ 153 (745)
|.+++++|.+ +++||.||||||||||++|||.+++|||+|+||+|||.|||.|||+|||++.+|+++|.||++
T Consensus 231 R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~ 310 (977)
T PLN02195 231 RETYIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAE 310 (977)
T ss_pred ceECHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHH
Confidence 9999998863 256999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-CC---------------
Q 004562 154 FAKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-GE--------------- 216 (745)
Q Consensus 154 fa~~wvpfc~k~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-~~--------------- 216 (745)
|||+||||||||+|||||||+||+.+ +..+++..|+|++||++||++|||||+|||.+.++ ++
T Consensus 311 FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~ 390 (977)
T PLN02195 311 FARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWP 390 (977)
T ss_pred HHHhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCC
Confidence 99999999999999999999999998 55557778999999999999999999999998644 11
Q ss_pred CCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 004562 217 YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC 296 (745)
Q Consensus 217 ~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~ 296 (745)
+.+++|||+||||+++++++. |.++.++|+++||+||||||++||+||||||+++|+|++|||||||+++||||++
T Consensus 391 g~~~~dHp~IIqVll~~~~~~----d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~ 466 (977)
T PLN02195 391 GNNTRDHPGMIQVFLGETGAR----DIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYV 466 (977)
T ss_pred CCCCCCCcchhhhhccCCCCc----ccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCcccc
Confidence 458899999999999876542 5567789999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccC-Cc
Q 004562 297 NDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NF 375 (745)
Q Consensus 297 ~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~ 375 (745)
|||++++++||||+||+.++++||||+||+|+|.+++|+|++++++||+++++|+||+|||+||||||+|||+|||| +|
T Consensus 467 n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p 546 (977)
T PLN02195 467 NNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGP 546 (977)
T ss_pred CcHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCc
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999 55
Q ss_pred ccc-------------------cc-----------------c---------------------hHhhhhhhCCchhHHhh
Q 004562 376 KHK-------------------GI-----------------D---------------------LAELKDTFGESNLFIKS 398 (745)
Q Consensus 376 ~~~-------------------~~-----------------d---------------------~~~~~~~~~~~~~~v~s 398 (745)
+.. .. + ..+++++||+|.+|++|
T Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S 626 (977)
T PLN02195 547 PSLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIES 626 (977)
T ss_pred cccccccccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHH
Confidence 321 00 0 01355689999999999
Q ss_pred hhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccC
Q 004562 399 LHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST 478 (745)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP 478 (745)
+..+..+... ...+++++++|++|++|.||++|+||+++||.|+|+|||+.||++||++||||+||+|.++++.|+||
T Consensus 627 ~~~~~~~~~~--~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP 704 (977)
T PLN02195 627 TLMENGGVPE--SANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAP 704 (977)
T ss_pred HHHHhcCCCC--CCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCC
Confidence 9877643322 23467899999999999999999999999999999999999999999999999999987789999999
Q ss_pred CChHHHHhHhHHhhcccccccccccCccccCC--CCCChhHHHHHHHHhHhhHhhHHHHHHHHHHhHHHHhcCCCccccc
Q 004562 479 TNLNDVLIQGTRWASGLIDVSISRFCPLLYGP--SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPET 556 (745)
Q Consensus 479 ~~l~~~l~Qr~RWa~G~~qi~~~r~~pl~~~~--~~l~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~l~Ll~g~~~~~~~ 556 (745)
+|+.+++.||+|||+|++|++++|+||++++. ++|++.||++|+++++|| ++++|.++|+++|++||++|++++|+
T Consensus 705 ~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~-~~slp~liY~~lP~l~Ll~G~~i~P~- 782 (977)
T PLN02195 705 INLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYP-FTSLPLIAYCTLPAICLLTGKFIIPT- 782 (977)
T ss_pred CCHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCeeccc-
Confidence 99999999999999999999999999999763 789999999999999999 99999999999999999999999998
Q ss_pred cccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhCccccchhchhhhHHhHhHHHHHHHHHHHHHHHHcCCCCCeeeCC
Q 004562 557 IVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTN 636 (745)
Q Consensus 557 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~ 636 (745)
++.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.++++++++++++++|+||+++++|+||+
T Consensus 783 --------vs~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTs 854 (977)
T PLN02195 783 --------LSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTA 854 (977)
T ss_pred --------chHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceecc
Confidence 778888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchhhhcccccceeecccchhHHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 004562 637 KVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIV 714 (745)
Q Consensus 637 K~~~~~~~~~y~~~~~~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~g--~~~~~~~~~~~~~~~~~~~~p~~~~l~~ 714 (745)
|..++++ +.++|+|+ ++++++|.++++++|++|+++|+++++.+| .|+++++++|+++|+++++|||++||++
T Consensus 855 K~~dd~~----~~~~Y~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~g 929 (977)
T PLN02195 855 KAADDTE----FGELYMVK-WTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMG 929 (977)
T ss_pred ccccccc----hhcceecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9876432 24788999 899999999999999999999999998755 6899999999999999999999999999
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHh
Q 004562 715 RKDKGRISPSAILLSSVFFVTFLFF 739 (745)
Q Consensus 715 r~~~~~~p~~~~~~~~~~~~~~~~~ 739 (745)
|| +|+|+++++||++|+++|+++
T Consensus 930 R~--~r~P~~v~v~s~ll~~~~~l~ 952 (977)
T PLN02195 930 RQ--NRTPTIVVLWSVLLASVFSLV 952 (977)
T ss_pred cC--CCCCeeehHHHHHHHHHHHHH
Confidence 97 788999999999999999985
No 6
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=3.3e-175 Score=1484.33 Aligned_cols=704 Identities=33% Similarity=0.596 Sum_probs=643.5
Q ss_pred CCCCCCceEEeecCchhhHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 004562 1 MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVS 80 (745)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~ 80 (745)
|++++|||++++.+++ ++|++.+++++++++|++||+++.++. + +.|+.+++||+|++++|+|+|+.+|+|++
T Consensus 5 ~~~~~pL~~~~~~~~~--~~r~~~~~vl~~~~~~l~~R~~~~~~~----~-~~W~~~~~~E~wf~~~WlL~q~~kw~pv~ 77 (756)
T PLN02190 5 SSSLPPLCERISHKSY--FLRAVDLTILGLLFSLLLYRILHMSEN----D-TVWLVAFLCESCFSFVWLLITCIKWSPAE 77 (756)
T ss_pred cCCCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHHhCCCcc----c-HHHHHHHHHHHHHHHHHHHhccceeeecC
Confidence 4568899999999998 599999999999999999999998764 2 57899999999999999999999999999
Q ss_pred ccCCCCCCCC-CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhh
Q 004562 81 RTVFPERLPE-DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWI 159 (745)
Q Consensus 81 r~~~~~~l~~-~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wv 159 (745)
|.++|++|.+ -+++|+||||||||||++|||++++||++|+|++|||+|||.|||+|||++++|+++|.||++|||+||
T Consensus 78 r~~~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~Wv 157 (756)
T PLN02190 78 YKPYPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWV 157 (756)
T ss_pred CCCCcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhc
Confidence 9999999875 346999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC-----CCCCCCCccce
Q 004562 160 PFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-------GE-----YGNSRNHSTII 227 (745)
Q Consensus 160 pfc~k~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-------~~-----~~~~~~h~~i~ 227 (745)
||||||+|||||||+||+... ++..++||++||++||++|||||+||+++.+. +. +++++|||+||
T Consensus 158 PFCrK~~IepRaPe~YF~~~~--~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~ii 235 (756)
T PLN02190 158 PFCKKYNVRVRAPFRYFLNPP--VATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIV 235 (756)
T ss_pred ccccccCCCcCCHHHHhcCCC--CCCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccce
Confidence 999999999999999999752 22345799999999999999999999998421 11 57899999999
Q ss_pred eeeccCCCCchhhhhccccCcceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHH
Q 004562 228 EIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (745)
Q Consensus 228 ~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~ 307 (745)
||++|++++ +.++.++|+++||+|||||+++||+||||||+++|+||+|||||||+|+||||++|||++++++||
T Consensus 236 qVll~~~~~-----~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmC 310 (756)
T PLN02190 236 KVVWENKGG-----VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMC 310 (756)
T ss_pred EEEecCCCC-----ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhh
Confidence 999998654 235778999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCC-CcEEEEcCCcccccCCccChHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccC-Ccccccc-----
Q 004562 308 FHLDPKTS-SSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKGI----- 380 (745)
Q Consensus 308 ~f~D~~~~-~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~~~----- 380 (745)
||+|++.+ +++||||+||+|+ |+|+|++++||++.++|+||+|||+|+||||+|||+|||| +|+....
T Consensus 311 f~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~ 385 (756)
T PLN02190 311 IFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLS 385 (756)
T ss_pred hhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCccccccccccc
Confidence 99998754 5899999999998 7899999999999999999999999999999999999999 6653211
Q ss_pred --------chHhhhhhhCCchhHHhhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHH
Q 004562 381 --------DLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFT 452 (745)
Q Consensus 381 --------d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t 452 (745)
..++.+++||+|.+|++|+..+..... ++...+++++++|++|++|.||++|+||+++||.|+|+|||+.|
T Consensus 386 ~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~-~~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~T 464 (756)
T PLN02190 386 SVATREFLAEDSLAREFGNSKEMVKSVVDALQRKP-NPQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNT 464 (756)
T ss_pred ccccccccchhhhhhhcCCcHHHHHHHHHHhccCC-CCccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHH
Confidence 123456899999999999988774322 22334578999999999999999999999999999999999999
Q ss_pred HHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHHhhcccccccccccCccccC-CCCCChhHHHHHHHHhHhhHhh
Q 004562 453 GFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLY 531 (745)
Q Consensus 453 ~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~r~~pl~~~-~~~l~~~qrl~Y~~~~~~~~l~ 531 (745)
|++||++||||+||+++++++.|.+|+++.+.+.||+||++|++|++++|+||++++ .++|++.||++|++.++ | ++
T Consensus 465 Gl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~-~~ 542 (756)
T PLN02190 465 SIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-C-LR 542 (756)
T ss_pred HHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-H-HH
Confidence 999999999999999888999999999999999999999999999999999999975 58999999999999877 8 99
Q ss_pred HHHHHHHHHHhHHHHhcCCCccccccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhCccccchhchhhhHHhHhHH
Q 004562 532 CLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVT 611 (745)
Q Consensus 532 ~~~~l~~~~~P~l~Ll~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~g~~~~~w~~~~~~w~i~~~~ 611 (745)
++|+++|+++|++||++|.+++|+ . +++++++++++.+++++++|++|+|+++++|||+||+|+|.+++
T Consensus 543 sip~l~Y~~lP~l~Ll~g~~i~P~---------~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~s 611 (756)
T PLN02190 543 SIPELIYCLLPAYCLLHNSALFPK---------G--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATS 611 (756)
T ss_pred HHHHHHHHHHHHHHHHcCCccccC---------c--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecch
Confidence 999999999999999999999997 2 67888888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCeeeCCCCCc-------------chhhhcccccceeecccchhHHHHHHHHHHHHHHHHHH
Q 004562 612 SHFYGSMDAIMKLLGLRKASFLPTNKVLD-------------NEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCG 678 (745)
Q Consensus 612 ~~~~~~~~al~~~l~~~~~~F~VT~K~~~-------------~~~~~~y~~~~~~f~~~~~l~~P~~~l~~l~l~al~~g 678 (745)
+++++++++++|+||+++++|+||+|+.+ +++.++|++|+|+|+ ++++++|.++++++|++|+++|
T Consensus 612 a~l~a~~~~~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~-~S~lfiP~tti~~~Nl~a~~~g 690 (756)
T PLN02190 612 SWLFSIQDIILKLLGISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGKFEFD-GSLYFLPGTFIVLVNLAALAGF 690 (756)
T ss_pred HHHHHHHHHHHHHhccccceEEEeeccccccccccccccccccccchhhhcceeEec-ceehHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999754 344578899999999 8999999999999999999999
Q ss_pred HHhhhhc-----CCchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHHHHHHHHHhh
Q 004562 679 VIRMIAV-----GNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFG 740 (745)
Q Consensus 679 ~~r~~~~-----g~~~~~~~~~~~~~~~~~~~~p~~~~l~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 740 (745)
++++... +.++.+ +++++|+|+|++++||++||+ |||||+||+|++++|++|+++|+++.
T Consensus 691 ~~~~~~~~~s~~~~~~~l-~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s~~~~s~~l~~~f~~~~ 755 (756)
T PLN02190 691 LVGLQRSSYSHGGGGSGL-AEACGCILVVMLFLPFLKGLF-EKGKYGIPLSTLSKAAFLAVLFVVFS 755 (756)
T ss_pred HHHHhhhhhccCcccccH-HHHHHHHHHHHHHHHHHHHHh-cCCCCCCChhHHHHHHHHHHHHHhcc
Confidence 9987642 455554 999999999999999999998 99999999999999999999999874
No 7
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=5.3e-175 Score=1515.65 Aligned_cols=713 Identities=33% Similarity=0.635 Sum_probs=654.1
Q ss_pred CCCCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 004562 2 ESPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVS 80 (745)
Q Consensus 2 ~~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~ 80 (745)
+..+|||++++.+++. .+||+++++++++++++++||++| ++.++.|+|+++++||+||+|+|+|+|+.||+|++
T Consensus 190 ~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~----~~~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~ 265 (1044)
T PLN02915 190 EARQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILT----PAYDAYPLWLISVICEIWFALSWILDQFPKWFPIN 265 (1044)
T ss_pred ccCCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcC----cCCCchHHHHHHHHHHHHHHHHHHHccCccccccc
Confidence 3478899999999874 479999999999999999999998 23457899999999999999999999999999999
Q ss_pred ccCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHH
Q 004562 81 RTVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFR 153 (745)
Q Consensus 81 r~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~ 153 (745)
|.+++++|.+ +++||.||||||||||++|||.+++|||+|+||+|||.|||.|||+|||++.+|+++|.||++
T Consensus 266 R~t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~ 345 (1044)
T PLN02915 266 RETYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAE 345 (1044)
T ss_pred cccCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHH
Confidence 9999998863 235999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------
Q 004562 154 FAKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-------GE--------- 216 (745)
Q Consensus 154 fa~~wvpfc~k~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-------~~--------- 216 (745)
|||+||||||||+|||||||+||+.+ +..+++..++|++||++||++|||||+|||.+.++ |+
T Consensus 346 FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~ 425 (1044)
T PLN02915 346 FARRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWP 425 (1044)
T ss_pred HHHhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCC
Confidence 99999999999999999999999998 55667878999999999999999999999988644 11
Q ss_pred CCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 004562 217 YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC 296 (745)
Q Consensus 217 ~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~ 296 (745)
+...+|||+||||++++++.. |.++.++|+||||+|||||+++||+||||||+++|+||+|||||||||+|||||+
T Consensus 426 g~~~~dHp~IIqVll~~~~~~----d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~ 501 (1044)
T PLN02915 426 GNNTRDHPGMIQVYLGSEGAL----DVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYI 501 (1044)
T ss_pred CCCCCCCccceEEeecCCCCc----ccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeecccccc
Confidence 346689999999999986642 5567789999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccC-Cc
Q 004562 297 NDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NF 375 (745)
Q Consensus 297 ~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~ 375 (745)
|||+++|++||||+||+.++++||||+||+|+|.+++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| .|
T Consensus 502 Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~p 581 (1044)
T PLN02915 502 NNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDP 581 (1044)
T ss_pred CcchhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 55
Q ss_pred cccc--------------------------------c-------------------------------------------
Q 004562 376 KHKG--------------------------------I------------------------------------------- 380 (745)
Q Consensus 376 ~~~~--------------------------------~------------------------------------------- 380 (745)
+..+ .
T Consensus 582 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (1044)
T PLN02915 582 PVSEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIE 661 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4200 0
Q ss_pred ---------------chHhhhhhhCCchhHHhhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCC
Q 004562 381 ---------------DLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQS 445 (745)
Q Consensus 381 ---------------d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~s 445 (745)
..+.++++||+|.+|++|+..+.. ..+...++++++++|++|++|.||++|+||+++||.|+|
T Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~--~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGS 739 (1044)
T PLN02915 662 EGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDG--GLPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGS 739 (1044)
T ss_pred cccccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhc--CCCCCCCcHHHHHHHHhccccCCCccCchhHhhCccccc
Confidence 012355689999999999988553 233344678899999999999999999999999999999
Q ss_pred ccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHHhhcccccccccccCccccC-CCCCChhHHHHHHHH
Q 004562 446 VSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEM 524 (745)
Q Consensus 446 vtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~r~~pl~~~-~~~l~~~qrl~Y~~~ 524 (745)
+|||+.||++||++||||+||+|+++++.|++|+|+.++++||+|||+|++||+++++||++++ .++|+++||++|+++
T Consensus 740 vTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~ 819 (1044)
T PLN02915 740 VTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINT 819 (1044)
T ss_pred cccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHH
Confidence 9999999999999999999999878899999999999999999999999999999999999975 379999999999999
Q ss_pred hHhhHhhHHHHHHHHHHhHHHHhcCCCccccccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhCccccchhchhhh
Q 004562 525 SLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRI 604 (745)
Q Consensus 525 ~~~~~l~~~~~l~~~~~P~l~Ll~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~g~~~~~w~~~~~~ 604 (745)
++|| +.++|.++|+++|++||++|++++|. ++......++++|+++++++++|++|+|.++++|||+||+
T Consensus 820 ~~yp-~~slp~liY~llP~l~LLtG~~i~P~---------~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~ 889 (1044)
T PLN02915 820 IVYP-FTSIPLLAYCTIPAVCLLTGKFIIPT---------LNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQF 889 (1044)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHcCCcccCc---------cchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhH
Confidence 9999 99999999999999999999999986 5555556667888999999999999999999999999999
Q ss_pred HHhHhHHHHHHHHHHHHHHHHcCCCCCeeeCCCCCcchhhhcccccceeecccchhHHHHHHHHHHHHHHHHHHHHhhhh
Q 004562 605 WMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIA 684 (745)
Q Consensus 605 w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~ 684 (745)
|+|.++++++++++++++|+||+++++|+||+|+.+++..+. +++|+|+ ++++++|+++++++|++|+++|+++++.
T Consensus 890 w~I~~tSa~Lfavl~~iLKvLg~se~~F~VTsK~~d~~~d~~--~ely~F~-~S~l~iP~ttllllNlvalv~Gi~~~i~ 966 (1044)
T PLN02915 890 WVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAADDEADEF--GELYLFK-WTTLLIPPTTLIILNMVGVVAGVSDAIN 966 (1044)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCcceecCCccccchhhh--ccceeec-ceehHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999886554332 5899999 9999999999999999999999999986
Q ss_pred c--CCchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHHHHHHHHHh
Q 004562 685 V--GNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF 739 (745)
Q Consensus 685 ~--g~~~~~~~~~~~~~~~~~~~~p~~~~l~~r~~~~~~p~~~~~~~~~~~~~~~~~ 739 (745)
. +.|+++++++++++|++++++||++||++|+ +|+|+++++||++|+++|+++
T Consensus 967 ~~~~~~g~l~~~l~~~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll 1021 (1044)
T PLN02915 967 NGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLV 1021 (1044)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHH
Confidence 4 4688999999999999999999999999997 788999999999999999986
No 8
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=6.3e-174 Score=1507.87 Aligned_cols=715 Identities=31% Similarity=0.581 Sum_probs=647.2
Q ss_pred CCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 004562 4 PLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (745)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (745)
.+|||++++.++.. ++||+++++++++++++|+||++| ++.++.|+|+++++||+||+|+|+|+|+.||+|++|.
T Consensus 267 ~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~----~~~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~ 342 (1135)
T PLN02248 267 WRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRN----PNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRA 342 (1135)
T ss_pred CCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcC----CCCcchHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 57899999999874 469999999999999999999998 2335699999999999999999999999999999999
Q ss_pred CCCCCCCC------------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHH
Q 004562 83 VFPERLPE------------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMRE 150 (745)
Q Consensus 83 ~~~~~l~~------------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~E 150 (745)
+++++|.+ +++||.||||||||||++|||.+++|||+|+||.|||.|||.|||+|||++.+|+++|.|
T Consensus 343 t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~E 422 (1135)
T PLN02248 343 TDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAE 422 (1135)
T ss_pred cCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHH
Confidence 99987753 136999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc---------------
Q 004562 151 AFRFAKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED--------------- 214 (745)
Q Consensus 151 a~~fa~~wvpfc~k~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~--------------- 214 (745)
|++|||+||||||||+|||||||+||+.+ +..+++..+||++||++||++|||||+|||.+.+.
T Consensus 423 Aa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~ 502 (1135)
T PLN02248 423 AASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIK 502 (1135)
T ss_pred HHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHH
Confidence 99999999999999999999999999988 55667778999999999999999999999987320
Q ss_pred ---------------------------CC-----------CCCCCCCccceeeeccCCCCch----------hhhhcccc
Q 004562 215 ---------------------------GE-----------YGNSRNHSTIIEIIQDTSGENE----------TIRQADLV 246 (745)
Q Consensus 215 ---------------------------~~-----------~~~~~~h~~i~~v~~~~~~~~~----------~~~~~~~~ 246 (745)
|. +++++|||+||||++++++.++ .+++..+.
T Consensus 503 ~~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~ 582 (1135)
T PLN02248 503 AKKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDI 582 (1135)
T ss_pred hhhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCccccccccccccccc
Confidence 01 3578899999999998765221 12234455
Q ss_pred CcceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcc
Q 004562 247 EMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQK 326 (745)
Q Consensus 247 ~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~ 326 (745)
++|+||||+|||||+++||+||||||+++|+||+|||||||||+||||++|||++++++||||+||+ ++++||||+||+
T Consensus 583 ~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQr 661 (1135)
T PLN02248 583 RLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQR 661 (1135)
T ss_pred ccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcc
Confidence 8999999999999999999999999999999999999999999999999999999999999999997 899999999999
Q ss_pred cccCCccChHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccC-Cccccc--------------------------
Q 004562 327 FHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKG-------------------------- 379 (745)
Q Consensus 327 f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~~-------------------------- 379 (745)
|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+|||| +|+...
T Consensus 662 F~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1135)
T PLN02248 662 FEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEE 741 (1135)
T ss_pred cCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999 564320
Q ss_pred ---------cchHhhhhhhCCchhHHhhhhhhccccc------------------cCCccchhhHHHhhhhhcccccccc
Q 004562 380 ---------IDLAELKDTFGESNLFIKSLHQSYEHKN------------------VNGENLSNVLQQETEVLASCSYEHQ 432 (745)
Q Consensus 380 ---------~d~~~~~~~~~~~~~~v~s~~~~~~~~~------------------~~~~~~~~~~~~~~~~v~~c~ye~~ 432 (745)
.+...++++||+|.+|++|+..+..... .+....+++++++|+.|++|.||++
T Consensus 742 ~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~ 821 (1135)
T PLN02248 742 QPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDK 821 (1135)
T ss_pred cccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccC
Confidence 0012345689999999999976652100 0112245688999999999999999
Q ss_pred ccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHHhhcccccccccccCccccCCCC
Q 004562 433 TKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSR 512 (745)
Q Consensus 433 t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~r~~pl~~~~~~ 512 (745)
|+||+++||.|+|+|||+.||++||++||||+||+++++++.|++|+|+.++++||+|||+|++||+++|+||++.+ ++
T Consensus 822 T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~ 900 (1135)
T PLN02248 822 TEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RR 900 (1135)
T ss_pred CchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CC
Confidence 99999999999999999999999999999999998778999999999999999999999999999999999998875 79
Q ss_pred CChhHHHHHHHHhHhhHhhHHHHHHHHHHhHHHHhcCCCccccccccccCCCCchhHHHHHH-HHHHHHHHHHHHHHHHh
Q 004562 513 MSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFS-FIFLSAICKHLQEVIST 591 (745)
Q Consensus 513 l~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~l~Ll~g~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~~~l~~~~~ 591 (745)
|++.||++|+++++|| +.+++.++|+++|++||++|++++++ . .++|++++ .+++.+++++++|++|+
T Consensus 901 Lsl~QRL~Yl~~~lyp-f~Slp~liY~llP~l~LLtGi~~~p~---------~-~~~fl~yll~l~l~~~~~sllE~~ws 969 (1135)
T PLN02248 901 LKFLQRIAYLNVGIYP-FTSIFLIVYCFLPALSLFSGQFIVQT---------L-NVTFLVYLLIITITLCLLAVLEIKWS 969 (1135)
T ss_pred CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCccccc---------c-cHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999 99999999999999999999999987 3 45666555 34578889999999999
Q ss_pred CccccchhchhhhHHhHhHHHHHHHHHHHHHHHHcCCCCCeeeCCCCCcchhhhcccccceeecccchhHHHHHHHHHHH
Q 004562 592 GGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILN 671 (745)
Q Consensus 592 g~~~~~w~~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~P~~~l~~l~ 671 (745)
|.+.++|||+||+|+|.++++++++++++++|+|++++.+|+||+|+.+++..++| +|.|+|+ ++++++|+++++++|
T Consensus 970 Gvsl~~WWrnQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~-a~ly~f~-wS~L~iP~ttl~llN 1047 (1135)
T PLN02248 970 GITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEF-ADLYIVK-WTSLMIPPITIMMVN 1047 (1135)
T ss_pred cccHHHHhhhhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCccccccccccc-chheecC-cchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887766677 6899999 899999999999999
Q ss_pred HHHHHHHHHhhhhc--CCchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHHHHHHHHHh
Q 004562 672 VAALVCGVIRMIAV--GNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF 739 (745)
Q Consensus 672 l~al~~g~~r~~~~--g~~~~~~~~~~~~~~~~~~~~p~~~~l~~r~~~~~~p~~~~~~~~~~~~~~~~~ 739 (745)
++|+++|++|++.+ +.|+.+++++++++|+++++|||++||++| |+|+|+++++||++++++++++
T Consensus 1048 LvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR--~gr~P~iv~v~s~ll~~~~sll 1115 (1135)
T PLN02248 1048 LIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGR--RGRTPTIVYVWSGLLSITISLL 1115 (1135)
T ss_pred HHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCeehHHHHHHHHHHHHHH
Confidence 99999999999875 357889999999999999999999999999 7788999999999999999986
No 9
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=3.4e-173 Score=1476.35 Aligned_cols=702 Identities=39% Similarity=0.764 Sum_probs=646.5
Q ss_pred CCCCCceEEeecCchhhHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 004562 2 ESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (745)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r 81 (745)
+..+||||+++.+++ .+||+++++++++++++++||+++.... ...|.|+++++||+||+++|+++|+.||+|++|
T Consensus 9 ~~~~pL~~~~~~~~~-~~~R~~~~~~~~~i~~ll~~r~~~~~~~---~~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r 84 (734)
T PLN02893 9 TGAPPLHTCHPMRRT-IANRVFAVVYSCAILALLYHHVIALLHS---TTTLITLLLLLADIVLAFMWATTQAFRMCPVHR 84 (734)
T ss_pred CCCCCceeeeecCCc-hHHHHHHHHHHHHHHHHHHHHhcccccc---cchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 457899999998886 4699999999999999999999987653 237899999999999999999999999999999
Q ss_pred cCCCCCCCC---CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhh
Q 004562 82 TVFPERLPE---DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWW 158 (745)
Q Consensus 82 ~~~~~~l~~---~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~w 158 (745)
.+++++|.+ ++++|+||||||||||++|||.+++|||+|+|+.|||.||+.|||+|||++.+|+++|.||++|||+|
T Consensus 85 ~~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~W 164 (734)
T PLN02893 85 RVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHW 164 (734)
T ss_pred ccCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhh
Confidence 999999874 45799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCC--------------------CC
Q 004562 159 IPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGE--------------------YG 218 (745)
Q Consensus 159 vpfc~k~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~--------------------~~ 218 (745)
|||||||+|||||||+||+.+ .+++.+||++||++|||||+|||++.+++. ++
T Consensus 165 vPFCrk~~ie~R~P~~YF~~~-------~~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~ 237 (734)
T PLN02893 165 LPFCKKNKIVERCPEAYFSSN-------SHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKF 237 (734)
T ss_pred cccccccCCCcCCHHHHhccC-------CCccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCC
Confidence 999999999999999999986 245678999999999999999999853322 35
Q ss_pred CCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCc
Q 004562 219 NSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (745)
Q Consensus 219 ~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~ 298 (745)
+++|||+||||+++++++. |.++.++|+++|++||||||++||+||||||+++|+|++|||||||+|+||||++||
T Consensus 238 ~~~dH~~ivqV~l~~~~~~----d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~ 313 (734)
T PLN02893 238 TRQDHPTVIQVLLESGKDK----DITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSND 313 (734)
T ss_pred CCCCCCceeeeeccCCCcc----chhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCc
Confidence 7899999999999987543 456778999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccCCcccc
Q 004562 299 PTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHK 378 (745)
Q Consensus 299 p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~ 378 (745)
|++++++||||+||+.++++||||+||+|+|.+++|+|++++++||+++++|+||+|||+||||||+|||+||+|.+...
T Consensus 314 p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~ 393 (734)
T PLN02893 314 PQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSL 393 (734)
T ss_pred hhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999854310
Q ss_pred ccchHhhhhhhCCchhHHhhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHH
Q 004562 379 GIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHC 458 (745)
Q Consensus 379 ~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~ 458 (745)
.. +....++.+. ...+....++++++|++|++|.||++|+||+++||.|+|+|||++||++||+
T Consensus 394 ~~---~~~~~~~~~~-------------~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~ 457 (734)
T PLN02893 394 IL---PEIPELNPDH-------------LVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQC 457 (734)
T ss_pred cc---hhhhhccccc-------------ccccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHh
Confidence 00 0000111110 0011123577899999999999999999999999999999999999999999
Q ss_pred CCCeEEEeCCCCCeeEeccCCChHHHHhHhHHhhcccccccccccCccccCCCCCChhHHHHHHHHhHhhHhhHHHHHHH
Q 004562 459 KGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCF 538 (745)
Q Consensus 459 ~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~r~~pl~~~~~~l~~~qrl~Y~~~~~~~~l~~~~~l~~ 538 (745)
+||||+||+++++++.|++|+|+.++++||+|||+|++|++++|+||++++.++|++.||++|++.++|+ ++++|+++|
T Consensus 458 ~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~-~~slp~liY 536 (734)
T PLN02893 458 EGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWP-IWSIPITIY 536 (734)
T ss_pred cCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHH-HhHHHHHHH
Confidence 9999999998778999999999999999999999999999999999999877899999999999999999 999999999
Q ss_pred HHHhHHHHhcCCCccccccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhCccccchhchhhhHHhHhHHHHHHHHH
Q 004562 539 ATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSM 618 (745)
Q Consensus 539 ~~~P~l~Ll~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~ 618 (745)
+++|++||++|++++|+ ++.++|+++++++++.++++++|++|+|.++++|||+||+|+|.++++++++++
T Consensus 537 ~~~P~l~Ll~g~~i~p~---------~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l 607 (734)
T PLN02893 537 AFLPQLALLNGVSIFPK---------ASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLV 607 (734)
T ss_pred HHHHHHHHHcCCccccc---------ccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHH
Confidence 99999999999999998 688999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCeeeCCCCCcchhhhcccccceeecccchhHHHHHHHHHHHHHHHHHHHHhhhhcCCchHHHHHHHHH
Q 004562 619 DAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLS 698 (745)
Q Consensus 619 ~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~g~~~~~~~~~~~~ 698 (745)
++++|++|+++.+|+||+|+.+.++.++|++|+|+|+.++++++|+++++++|++|+++|+++++.++.++++++|++||
T Consensus 608 ~~iLk~lg~s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~~~~~~~~~~~~~~ 687 (734)
T PLN02893 608 EFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLA 687 (734)
T ss_pred HHHHHHhcccCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 99999999999999999999887778899999999998899999999999999999999999998877788999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHHHHHHHHHhhhccc
Q 004562 699 LYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIIL 744 (745)
Q Consensus 699 ~~~~~~~~p~~~~l~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 744 (745)
+|++++++||++||++|||||+||+|+++||++|+++++.+.++++
T Consensus 688 ~~~v~~~~P~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~~~~ 733 (734)
T PLN02893 688 GFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLAWALYLASSFAF 733 (734)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCCccHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999999999999998875
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=2e-162 Score=1376.90 Aligned_cols=622 Identities=43% Similarity=0.810 Sum_probs=581.1
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccc
Q 004562 97 IDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYF 176 (745)
Q Consensus 97 VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf 176 (745)
|||||||+||++|||.+++|||+|+|++|||.|||+|||+|||++++|+++|.||++|||+||||||||+||||||++||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------CCCCCCCccceeeeccCCCCchh
Q 004562 177 SEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-------GE---------YGNSRNHSTIIEIIQDTSGENET 239 (745)
Q Consensus 177 ~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-------~~---------~~~~~~h~~i~~v~~~~~~~~~~ 239 (745)
+.+ +..+++.+++|++||++||++|||||+|||.+.++ ++ +++++|||+||||+++++++.
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~-- 158 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGK-- 158 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCc--
Confidence 998 66778889999999999999999999999987532 22 467999999999999987654
Q ss_pred hhhccccCcceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEE
Q 004562 240 IRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLA 319 (745)
Q Consensus 240 ~~~~~~~~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg 319 (745)
|.++.++|+++||+|||||+++||+||||||+++|+|++|||||||+|+||||++|||++++++||||+||+.++++|
T Consensus 159 --~~~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~ 236 (720)
T PF03552_consen 159 --DVDGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIA 236 (720)
T ss_pred --ccccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeE
Confidence 677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCcccccCCccChHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccC-Cccccc-------------------
Q 004562 320 FVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKG------------------- 379 (745)
Q Consensus 320 ~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~~------------------- 379 (745)
|||+||+|+|.+++|+|+|++++||+++++|+||+|||+|+||||+|||+|||| +|+...
T Consensus 237 ~vQfpq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~ 316 (720)
T PF03552_consen 237 FVQFPQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKK 316 (720)
T ss_pred EEeCCceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccc
Confidence 999999999999999999999999999999999999999999999999999999 665310
Q ss_pred c-----------------------------------------chHhhhhhhCCchhHHhhhhhhccccccCCccchhhHH
Q 004562 380 I-----------------------------------------DLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQ 418 (745)
Q Consensus 380 ~-----------------------------------------d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~~~~~ 418 (745)
. +.++++++||+|.+||+|+..+.. ..++....++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~--~~~~~~~~~~~L 394 (720)
T PF03552_consen 317 KKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQG--GVPRSPSPASLL 394 (720)
T ss_pred ccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhc--CCCCCCChHHHH
Confidence 0 014666899999999999986543 233344568899
Q ss_pred HhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHHhhcccccc
Q 004562 419 QETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDV 498 (745)
Q Consensus 419 ~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi 498 (745)
+||++|++|.||++|+||+++||.|+++|||+.||++||++||||+||+|++++|.|.||+|+.+.+.|++|||.|++||
T Consensus 395 ~EA~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI 474 (720)
T PF03552_consen 395 EEAIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEI 474 (720)
T ss_pred HHHHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccccC-CCCCChhHHHHHHHHhHhhHhhHHHHHHHHHHhHHHHhcCCCccccccccccCCCCchhHHHHHHHHH
Q 004562 499 SISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSFIF 577 (745)
Q Consensus 499 ~~~r~~pl~~~-~~~l~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~l~Ll~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 577 (745)
+++|+||++++ +++|+++||++|++.++|+ ++++|.++|+++|++||++|++++|+ ++.+++++|+++|
T Consensus 475 ~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~yp-l~Sipll~Y~~lPalcLLtG~~i~Pk---------~s~~~~~~f~~lf 544 (720)
T PF03552_consen 475 FFSRHCPLWYGYGGRLKFLQRLAYLNYMLYP-LTSIPLLCYCFLPALCLLTGIFIFPK---------VSSPWFIYFLALF 544 (720)
T ss_pred ehhcCCchhccCCCCCcHHHHHHHHHHhhhH-HHHHHHHHHHHhHHHHhhCCCcccCc---------cccchhHHHHHHH
Confidence 99999999997 5799999999999999999 99999999999999999999999998 7889999999999
Q ss_pred HHHHHHHHHHHHHhCccccchhchhhhHHhHhHHHHHHHHHHHHHHHHcCCCCCeeeCCCCCcchhhhcccccceeeccc
Q 004562 578 LSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTS 657 (745)
Q Consensus 578 ~~~~~~~~l~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~ 657 (745)
+++++++++|++|+|.++++|||+||+|+|.++++++++++++++|++|+++++|+||+|+.++++.+. .+.|+|+ +
T Consensus 545 ~~~~~~~llE~~wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~--~ely~f~-w 621 (720)
T PF03552_consen 545 VSIYAYSLLEFRWSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDDKY--AELYIFK-W 621 (720)
T ss_pred HHHHHHHHHHHHhccCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeecccccccccccc--ccccccc-c
Confidence 999999999999999999999999999999999999999999999999999999999999987544333 3678888 7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHHHHHH
Q 004562 658 SVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVT 735 (745)
Q Consensus 658 ~~l~~P~~~l~~l~l~al~~g~~r~~~~g--~~~~~~~~~~~~~~~~~~~~p~~~~l~~r~~~~~~p~~~~~~~~~~~~~ 735 (745)
+++++|.++++++|++|+++|+++.+..+ +|+++++++|+++|+++++|||++||++||+ |+|+|+++||++||++
T Consensus 622 S~LfiP~tTllilNLva~v~Gi~r~i~~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i 699 (720)
T PF03552_consen 622 SPLFIPPTTLLILNLVAFVVGISRAINSGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASI 699 (720)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHH
Confidence 88999999999999999999999988754 6899999999999999999999999999976 5999999999999999
Q ss_pred HHHh
Q 004562 736 FLFF 739 (745)
Q Consensus 736 ~~~~ 739 (745)
|+++
T Consensus 700 ~~ll 703 (720)
T PF03552_consen 700 FSLL 703 (720)
T ss_pred HHHH
Confidence 9987
No 11
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=4.1e-73 Score=672.15 Aligned_cols=508 Identities=26% Similarity=0.344 Sum_probs=411.8
Q ss_pred HHHHHHHHHHH-HHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCCCCCCceE
Q 004562 20 NKLHAFLHCIA-IALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAID 98 (745)
Q Consensus 20 ~r~~~~~~~~~-~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~Vd 98 (745)
-|++.++..++ .+.|++||++.++|..+.....++++++++|+++.+..+++.+..++|.+|++.+.. .+++.+|+||
T Consensus 56 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~P~Vs 134 (713)
T TIGR03030 56 PRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPLP-LDPEEWPTVD 134 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCCC-CCcccCCeeE
Confidence 46665555555 578999999999997666667788899999999999988888888888877643322 1256789999
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004562 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (745)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~~ 178 (745)
|+||| |||+++++++|+.+++++|||+||++|+|+|||++|.|.....+.++
T Consensus 135 ViIP~---yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~------------------------- 186 (713)
T TIGR03030 135 VFIPT---YNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQA------------------------- 186 (713)
T ss_pred EEEcC---CCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhh-------------------------
Confidence 99999 99999899999999999999999999999999999987532211111
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccC
Q 004562 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (745)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~k 258 (745)
|..+.+.++++..++ .++.|+.|++
T Consensus 187 ----------~~~~~~~~~~~l~~~---------------------------------------------~~v~yi~r~~ 211 (713)
T TIGR03030 187 ----------EAAQRREELKEFCRK---------------------------------------------LGVNYITRPR 211 (713)
T ss_pred ----------hhhhhHHHHHHHHHH---------------------------------------------cCcEEEECCC
Confidence 000011112222111 1478999887
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc-CCCCCCcEEEEcCCcccccCCcc----
Q 004562 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEH---- 333 (745)
Q Consensus 259 rp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~---- 333 (745)
+ +|+||||+|+|+++ ++||+|+++|||+++. ||+|++++++|. ||+ +|+||+||.|+|.+.-
T Consensus 212 n----~~~KAgnLN~al~~----a~gd~Il~lDAD~v~~-pd~L~~~v~~f~~dp~----v~~Vqtp~~f~~p~~~~~nl 278 (713)
T TIGR03030 212 N----VHAKAGNINNALKH----TDGELILIFDADHVPT-RDFLQRTVGWFVEDPK----LFLVQTPHFFVSPDPIERNL 278 (713)
T ss_pred C----CCCChHHHHHHHHh----cCCCEEEEECCCCCcC-hhHHHHHHHHHHhCCC----EEEEeCCeeccCCCHHhhhh
Confidence 5 78999999999999 8999999999999986 999999999994 666 9999999999986421
Q ss_pred ---ChHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCC
Q 004562 334 ---DIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNG 410 (745)
Q Consensus 334 ---d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~ 410 (745)
+.+.++.+.||+.++.|.|.++++++||+|+++||+++.
T Consensus 279 ~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~-------------------------------------- 320 (713)
T TIGR03030 279 GTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALD-------------------------------------- 320 (713)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHH--------------------------------------
Confidence 233456678999999999999999999999999999992
Q ss_pred ccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHH
Q 004562 411 ENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTR 490 (745)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~R 490 (745)
+.+||++++++||++++++||++||+++|+++ +.+.|++|+|++++++||.|
T Consensus 321 --------------------------~iGGf~~~~vtED~~l~~rL~~~G~~~~y~~~--~~~~g~~p~sl~~~~~Qr~R 372 (713)
T TIGR03030 321 --------------------------EIGGIAGETVTEDAETALKLHRRGWNSAYLDR--PLIAGLAPETLSGHIGQRIR 372 (713)
T ss_pred --------------------------HcCCCCCCCcCcHHHHHHHHHHcCCeEEEecc--ccccccCCCCHHHHHHHHHH
Confidence 24689999999999999999999999999996 68899999999999999999
Q ss_pred hhcccccccccccCccccCCCCCChhHHHHHHHHhHhhHhhHHHHHHHHHHhHHHHhcCCCccccccccccCCCCchhHH
Q 004562 491 WASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFF 570 (745)
Q Consensus 491 Wa~G~~qi~~~r~~pl~~~~~~l~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~l~Ll~g~~~~~~~~~~~~~~~~~~~~f 570 (745)
|++|++|+++. .||++. +++++.||++|+++++|+ +++++.++|+++|++++++|.+++++ +. .
T Consensus 373 Wa~G~~qi~~~-~~pl~~--~gl~~~qrl~y~~~~~~~-~~~~~~~~~~~~P~~~l~~~~~~~~~----------~~--~ 436 (713)
T TIGR03030 373 WAQGMMQIFRL-DNPLLK--RGLSFPQRLCYLNAMLFW-FFPLPRVIFLTAPLAYLFFGLNIFVA----------SA--L 436 (713)
T ss_pred HhcChHHHHhh-hCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCcceeC----------CH--H
Confidence 99999999874 589874 799999999999999999 99999999999999999999999876 11 1
Q ss_pred HHHHHHHHHHHHHHHHHHH-HhCccccchhchhhhHHhHhHHHHHHHHHHHHHHHHcCCCCCeeeCCCCCcchhhhcccc
Q 004562 571 MVFSFIFLSAICKHLQEVI-STGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEM 649 (745)
Q Consensus 571 ~~~~~~~~~~~~~~~l~~~-~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~ 649 (745)
..+ +.++|+++.+++.+. ..|.....||++ ++.++ ..++.+..++.+++++++.+|+||||++..++
T Consensus 437 ~~~-~~~lp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~------ 504 (713)
T TIGR03030 437 EIL-AYALPHMLHSLLTNSYLFGRVRWPFWSE----VYETV-LAVYLLPPVLVTLLNPKKPKFNVTPKGELLDE------ 504 (713)
T ss_pred HHH-HHHHHHHHHHHHHHHHHcCCeecchHHH----HHHHH-HHHHHHHHHHHHHhCcCCCCceecCCCccccc------
Confidence 122 234677777766643 457677889988 33333 55677788888899999999999999986543
Q ss_pred cceeecccchhHHHHHHHHHHHHHHHHHHHHhhhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCch
Q 004562 650 GQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG-NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISP 723 (745)
Q Consensus 650 ~~~~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~g-~~~~~~~~~~~~~~~~~~~~p~~~~l~~r~~~~~~p~ 723 (745)
+. .++++.|++++++++++|+++|++++.... ....+.++++|++|+++.+...+.+...|+++++-|.
T Consensus 505 ~~-----~~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~QrR~~~R 574 (713)
T TIGR03030 505 DY-----FSPLSRPYLILFALILAGLAFGLYRIYGYPIERGVLLVVLGWNLLNLILLGAALAVVAERRQRRSSPR 574 (713)
T ss_pred cc-----cchHHHHHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHccCCCCCCccc
Confidence 11 237899999999999999999999987533 2356789999999999999999999988888777553
No 12
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=2.6e-73 Score=671.60 Aligned_cols=487 Identities=25% Similarity=0.343 Sum_probs=397.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCC-CCCCCceEEE
Q 004562 22 LHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPE-DDKLPAIDVF 100 (745)
Q Consensus 22 ~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~-~~~~P~VdV~ 100 (745)
+++++.+++.+.|++||++.|+|..+..+..++++++++|+|+.+..+++.+..+.|..|++. .++. .+.+|+|||+
T Consensus 188 ~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~--~~~~~~~~~P~VsVi 265 (852)
T PRK11498 188 MLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPV--PLPKDMSLWPTVDIF 265 (852)
T ss_pred HHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC--CCCcccCCCCcEEEE
Confidence 344555666789999999999997666778888999999999998888888888888877632 2333 4578999999
Q ss_pred EecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccccc
Q 004562 101 ICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAE 180 (745)
Q Consensus 101 I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~~~~ 180 (745)
||| ||||.+++++|+.+++++|||++|++|||+|||++|.|.+ +|+++
T Consensus 266 IPt---YNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~--------------la~~~--------------- 313 (852)
T PRK11498 266 VPT---YNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQ--------------FAQEV--------------- 313 (852)
T ss_pred Eec---CCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHH--------------HHHHC---------------
Confidence 999 9999889999999999999999999999999999985421 11111
Q ss_pred cccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccCCC
Q 004562 181 SDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSP 260 (745)
Q Consensus 181 ~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~krp 260 (745)
++.|+.|+++
T Consensus 314 ---------------------------------------------------------------------~v~yI~R~~n- 323 (852)
T PRK11498 314 ---------------------------------------------------------------------GVKYIARPTH- 323 (852)
T ss_pred ---------------------------------------------------------------------CcEEEEeCCC-
Confidence 2588888764
Q ss_pred CCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhh-cCCCCCCcEEEEcCCcccccCCccC-----
Q 004562 261 EHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHD----- 334 (745)
Q Consensus 261 ~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d----- 334 (745)
.|+||||+|+|+++ ++||||+++|||+++. ||+|++++++| .||+ +|+||+||.|+|.++-.
T Consensus 324 ---~~gKAGnLN~aL~~----a~GEyIavlDAD~ip~-pdfL~~~V~~f~~dP~----VglVQtp~~f~n~dp~~rnl~~ 391 (852)
T PRK11498 324 ---EHAKAGNINNALKY----AKGEFVAIFDCDHVPT-RSFLQMTMGWFLKDKK----LAMMQTPHHFFSPDPFERNLGR 391 (852)
T ss_pred ---CcchHHHHHHHHHh----CCCCEEEEECCCCCCC-hHHHHHHHHHHHhCCC----eEEEEcceeccCCchHHHhhHH
Confidence 68999999999999 8999999999999976 99999999876 5777 99999999999864311
Q ss_pred --hHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCCcc
Q 004562 335 --IYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGEN 412 (745)
Q Consensus 335 --~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~ 412 (745)
.+.++.+.||+.++.|.+.++++++||+++++||+++.
T Consensus 392 ~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLe---------------------------------------- 431 (852)
T PRK11498 392 FRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLD---------------------------------------- 431 (852)
T ss_pred HhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHH----------------------------------------
Confidence 12235567899999999999999999999999999992
Q ss_pred chhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHHhh
Q 004562 413 LSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWA 492 (745)
Q Consensus 413 ~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~RWa 492 (745)
+.+||++++++||+++++++|++||+++|+++ +.+.|++|+|++++++||.||+
T Consensus 432 ------------------------eVGGfd~~titED~dlslRL~~~Gyrv~yl~~--~~a~glaPesl~~~~~QR~RWa 485 (852)
T PRK11498 432 ------------------------EIGGIAVETVTEDAHTSLRLHRRGYTSAYMRI--PQAAGLATESLSAHIGQRIRWA 485 (852)
T ss_pred ------------------------HhcCCCCCccCccHHHHHHHHHcCCEEEEEec--cceeEECCCCHHHHHHHHHHHH
Confidence 24689999999999999999999999999986 6889999999999999999999
Q ss_pred cccccccccccCccccCCCCCChhHHHHHHHHhHhhHhhHHHHHHHHHHhHHHHhcCCCccccccccccCCCCchhHHHH
Q 004562 493 SGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMV 572 (745)
Q Consensus 493 ~G~~qi~~~r~~pl~~~~~~l~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~l~Ll~g~~~~~~~~~~~~~~~~~~~~f~~ 572 (745)
+|++|+++ ++||++. +++++.||++|+++++++ +.++|.++|+++|++|+++|+.++.+ +...+
T Consensus 486 rG~lQi~r-~~~pl~~--~gL~~~qRl~y~~~~l~~-l~g~~~l~~l~~Pl~~l~~gi~~i~a------------~~~~i 549 (852)
T PRK11498 486 RGMVQIFR-LDNPLTG--KGLKLAQRLCYANAMLHF-LSGIPRLIFLTAPLAFLLLHAYIIYA------------PALMI 549 (852)
T ss_pred HHHHHHHH-HhChhcc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCChheeC------------ChHHH
Confidence 99999987 5789874 799999999999999999 99999999999999999999988754 22222
Q ss_pred HHHHHHHHHHHHHHHH-HHhCccccchhchhhhHHhHhHHHHHHHHHHHHHHHHcCCCCCeeeCCCCCcchhhhcccccc
Q 004562 573 FSFIFLSAICKHLQEV-ISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQ 651 (745)
Q Consensus 573 ~~~~~~~~~~~~~l~~-~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~ 651 (745)
++ .++|+++...+.. ..+|.....||++ ++.++ ..++....++..++++++.+|+||||++..++ ++
T Consensus 550 ~~-y~lP~~~~~~l~~~~~~g~~r~~~wse----iye~v-~a~~l~~~~~~~ll~p~~~~F~VTpKg~~~~~------~~ 617 (852)
T PRK11498 550 AL-FVLPHMIHASLTNSRIQGKYRHSFWSE----IYETV-LAWYIAPPTTVALFNPHKGKFNVTAKGGLVEE------EY 617 (852)
T ss_pred HH-HHHHHHHHHHHHHHHhcCcchHhHHHH----HHHHH-HHHHHHHHHHHHHcCccCCCcccCCCCccccc------cc
Confidence 33 2356555443333 3456666778887 34444 34444555667789999999999999976554 66
Q ss_pred eeecccchhHHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCc
Q 004562 652 FDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRIS 722 (745)
Q Consensus 652 ~~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~g--~~~~~~~~~~~~~~~~~~~~p~~~~l~~r~~~~~~p 722 (745)
|+|+ +..|+++++++|++|+++|++++..+. ....+.+|++|++|+++++...+.+..-++..++-|
T Consensus 618 ~~~~----~~~P~~~L~~L~l~gl~~g~~r~~~~~~~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~~~~r~~~ 686 (852)
T PRK11498 618 VDWV----ISRPYIFLVLLNLVGVAVGIWRYFYGPPNEILTVIVSLVWVFYNLIILGGAVAVSVESKQVRRSH 686 (852)
T ss_pred eehH----HHHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhhHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 7765 567999999999999999999987632 234667999999999999998888888776655443
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=2e-38 Score=371.00 Aligned_cols=360 Identities=16% Similarity=0.145 Sum_probs=250.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccch--hh---HHHHHHHHHHHHHHHHHHHHHHHhhccccccCCC---CC--C
Q 004562 19 LNKLHAFLHCIAIALLIYYRASYLLQETRAI--SI---IPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFP---ER--L 88 (745)
Q Consensus 19 ~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~--~~---~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r~~~~---~~--l 88 (745)
+.|++.++..++...|..|+....++..+.+ .. .+-.+++..+.+.....+++.+...+ .|+..+ +. -
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~~~~~~~~~~ 117 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKYSISASAAGD 117 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcccCCcccccC
Confidence 5788888888888999999999988764321 11 11223345555555555555444322 121111 10 0
Q ss_pred CCCCCCCceEEEEecCCCCCCchHH----HHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhh
Q 004562 89 PEDDKLPAIDVFICTADPEKEPTFG----VMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRR 164 (745)
Q Consensus 89 ~~~~~~P~VdV~I~t~~pynEp~~~----v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k 164 (745)
+.....|+|+|+||+ |||+++. ++.+++|+.++|||. +++++|+|||++|.+... |
T Consensus 118 ~~~~~~~~VaVliP~---yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~--e-------------- 177 (691)
T PRK05454 118 PPPPPEARTAILMPI---YNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAA--E-------------- 177 (691)
T ss_pred CCCCCCCceEEEEeC---CCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHH--H--------------
Confidence 113457999999999 9999864 566666777799984 799999999999865221 1
Q ss_pred cccccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhcc
Q 004562 165 YRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQAD 244 (745)
Q Consensus 165 ~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~ 244 (745)
. +.++++.++.
T Consensus 178 -----------------------------~----~~~~~L~~~~------------------------------------ 188 (691)
T PRK05454 178 -----------------------------E----AAWLELRAEL------------------------------------ 188 (691)
T ss_pred -----------------------------H----HHHHHHHHhc------------------------------------
Confidence 0 1122221110
Q ss_pred ccCcceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc-CCCCCCcEEEEcC
Q 004562 245 LVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQF 323 (745)
Q Consensus 245 ~~~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~ 323 (745)
..-+++.|.+|++| .++||||+|++++.++ .++|||+++|||++++ ||++++++.+|. ||+ +|.||+
T Consensus 189 -~~~~~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m~-~d~L~~lv~~m~~dP~----vGlVQt 256 (691)
T PRK05454 189 -GGEGRIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSLMS-GDTLVRLVRLMEANPR----AGLIQT 256 (691)
T ss_pred -CCCCcEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCCCC-HHHHHHHHHHHhhCcC----EEEEeC
Confidence 00135789888775 6789999999999976 6789999999999987 999999999986 776 999999
Q ss_pred CcccccCCccChHHHH----HHHhhhhhHhhhhhcC--CccccccccchhhhhccCCccccccchHhhhhhhCCchhHHh
Q 004562 324 PQKFHNFNEHDIYDGS----LRSGYRLQWPGMDGLK--GPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIK 397 (745)
Q Consensus 324 Pq~f~n~~~~d~~~~~----~~~f~~~~~~g~d~~~--~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~ 397 (745)
++.+.|.+ ..++.- .+++......|.+.++ ...|+|+|+++||+++..
T Consensus 257 ~~~~~n~~--slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~------------------------ 310 (691)
T PRK05454 257 LPVAVGAD--TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAE------------------------ 310 (691)
T ss_pred CccCcCCC--CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHH------------------------
Confidence 99988763 334332 2333445667887766 356899999999999942
Q ss_pred hhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEecc
Q 004562 398 SLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTS 477 (745)
Q Consensus 398 s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~a 477 (745)
.|... .....+||..++++||+++|.+++++|||++|+++ .+.+++++
T Consensus 311 ----------------------------~~glp---~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd-~~~~~ee~ 358 (691)
T PRK05454 311 ----------------------------HCGLP---PLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPD-LPGSYEEL 358 (691)
T ss_pred ----------------------------hcCCc---cccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCc-cccccccC
Confidence 00000 00023578889999999999999999999999986 24689999
Q ss_pred CCChHHHHhHhHHhhcccccccccccCccccCCCCCChhHHHHHHHHhHhhHhhHHHHHHHHHHhHHH
Q 004562 478 TTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLC 545 (745)
Q Consensus 478 P~~l~~~l~Qr~RWa~G~~qi~~~r~~pl~~~~~~l~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~l~ 545 (745)
|+|+.++++||.||++|++|.+.. +. .+++++.+|+.|++..+.++...++.+++++.|++.
T Consensus 359 P~tl~~~~~qr~RW~~G~lQ~l~~----l~--~~gl~~~~R~~~l~g~~~yl~~P~wll~l~l~~~~~ 420 (691)
T PRK05454 359 PPNLLDELKRDRRWCQGNLQHLRL----LL--AKGLHPVSRLHFLTGIMSYLSAPLWLLFLLLGTALA 420 (691)
T ss_pred CCCHHHHHHHHHHHHhchHHHHHH----HH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998752 22 268999999998876665523333333344444433
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=1.1e-36 Score=319.78 Aligned_cols=242 Identities=16% Similarity=0.207 Sum_probs=184.3
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHc----CCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004562 97 IDVFICTADPEKEPTFGVMNTVLSAMA----LDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (745)
Q Consensus 97 VdV~I~t~~pynEp~~~v~~Tv~s~~~----~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p 172 (745)
|+|+||+ |||+++++.+|+.+... +||+. +++|+|+|||+++....
T Consensus 1 ~SIliP~---~ne~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~~-------------------------- 50 (254)
T cd04191 1 TAIVMPV---YNEDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIWL-------------------------- 50 (254)
T ss_pred CEEEEeC---CCCCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHHH--------------------------
Confidence 6899999 99999989999999875 56632 49999999999872110
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEE
Q 004562 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (745)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~ 252 (745)
.+...+.+..+++ ...++++
T Consensus 51 -------------------~~~~~~~~l~~~~-----------------------------------------~~~~~v~ 70 (254)
T cd04191 51 -------------------AEEAAWLDLCEEL-----------------------------------------GAQGRIY 70 (254)
T ss_pred -------------------HHHHHHHHHHHHh-----------------------------------------CCCCcEE
Confidence 0111111111111 0124789
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc-CCCCCCcEEEEcCCcccccCC
Q 004562 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFN 331 (745)
Q Consensus 253 Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~ 331 (745)
|+.|+++ .|.||||||+++...+ +++|||+++|||+.++ |++|++++.+|. ||+ +|+||+|+++.|.+
T Consensus 71 ~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~~-p~~l~~~v~~~~~~~~----vg~vq~~~~~~n~~ 139 (254)
T cd04191 71 YRRRREN----TGRKAGNIADFCRRWG--SRYDYMVVLDADSLMS-GDTIVRLVRRMEANPR----AGIIQTAPKLIGAE 139 (254)
T ss_pred EEEcCCC----CCccHHHHHHHHHHhC--CCCCEEEEEeCCCCCC-HHHHHHHHHHHHhCCC----EEEEeCCceeECCC
Confidence 9999886 6889999999998744 6789999999999987 999999999996 877 99999999999863
Q ss_pred ccChHHH----HHHHhhhhhHhhhhhcCC--ccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccc
Q 004562 332 EHDIYDG----SLRSGYRLQWPGMDGLKG--PFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEH 405 (745)
Q Consensus 332 ~~d~~~~----~~~~f~~~~~~g~d~~~~--~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~ 405 (745)
..+.+ +...|...++.|++.+++ .+|+|++.++||++|.. .
T Consensus 140 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~-----------~-------------------- 186 (254)
T cd04191 140 --TLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFME-----------H-------------------- 186 (254)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHH-----------h--------------------
Confidence 22222 234455667788877644 57899999999999931 0
Q ss_pred cccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHH
Q 004562 406 KNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVL 485 (745)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l 485 (745)
|.. ...|..+||.+++++||+++|++++.+|||++|+++. ..+.+++|+|+++++
T Consensus 187 ---------------------~~~---~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~-~~~~~~~p~~~~~~~ 241 (254)
T cd04191 187 ---------------------CAL---PVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDL-EGSYEECPPTLIDFL 241 (254)
T ss_pred ---------------------cCC---ccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCC-cceEeECCCCHHHHH
Confidence 000 0012235788899999999999999999999999862 336899999999999
Q ss_pred hHhHHhhccccc
Q 004562 486 IQGTRWASGLID 497 (745)
Q Consensus 486 ~Qr~RWa~G~~q 497 (745)
+||.||++|++|
T Consensus 242 ~qr~RW~~G~~q 253 (254)
T cd04191 242 KRDRRWCQGNLQ 253 (254)
T ss_pred HHHHHHHhhcCc
Confidence 999999999998
No 15
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=8.4e-35 Score=328.86 Aligned_cols=230 Identities=19% Similarity=0.188 Sum_probs=184.7
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004562 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (745)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r 170 (745)
.+..|.|+|+||+ |||+. .+.+|+.|+++++||+ ++|+|+|||++|.|.+.+.+..+
T Consensus 71 ~~~~p~vsViIP~---yNE~~-~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~~~~~~~~~----------------- 127 (444)
T PRK14583 71 LKGHPLVSILVPC---FNEGL-NARETIHAALAQTYTN--IEVIAINDGSSDDTAQVLDALLA----------------- 127 (444)
T ss_pred cCCCCcEEEEEEe---CCCHH-HHHHHHHHHHcCCCCC--eEEEEEECCCCccHHHHHHHHHH-----------------
Confidence 3457999999999 99995 7899999999999995 89999999999987654332110
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcce
Q 004562 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (745)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~ 250 (745)
..|+
T Consensus 128 ----------------------------------------------------------------------------~~~~ 131 (444)
T PRK14583 128 ----------------------------------------------------------------------------EDPR 131 (444)
T ss_pred ----------------------------------------------------------------------------hCCC
Confidence 0123
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc-CCCCCCcEEEEcCCccccc
Q 004562 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHN 329 (745)
Q Consensus 251 l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n 329 (745)
+.++.+++ +++||+|+|.|++. +++|+++++|||++++ ||++++++..|. ||+ +|.||+.....|
T Consensus 132 v~vv~~~~-----n~Gka~AlN~gl~~----a~~d~iv~lDAD~~~~-~d~L~~lv~~~~~~~~----~g~v~g~~~~~~ 197 (444)
T PRK14583 132 LRVIHLAH-----NQGKAIALRMGAAA----ARSEYLVCIDGDALLD-KNAVPYLVAPLIANPR----TGAVTGNPRIRT 197 (444)
T ss_pred EEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCcC-HHHHHHHHHHHHhCCC----eEEEEccceecC
Confidence 45555443 46799999999999 8999999999999986 999999998775 554 999999876655
Q ss_pred CCccChHHH----HHHHhhhhhHhhhhhcCCccc-cccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhcc
Q 004562 330 FNEHDIYDG----SLRSGYRLQWPGMDGLKGPFL-TGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYE 404 (745)
Q Consensus 330 ~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~~-~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~ 404 (745)
. +..++. +...+++.+.++.+..+..++ +|+++.+||+++.
T Consensus 198 ~--~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~-------------------------------- 243 (444)
T PRK14583 198 R--STLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALA-------------------------------- 243 (444)
T ss_pred C--CcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHH--------------------------------
Confidence 3 222222 333445556666666666554 6889999999992
Q ss_pred ccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHH
Q 004562 405 HKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDV 484 (745)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~ 484 (745)
+.+||+.++++||++++++++.+||++.|+++ +.+++++|+|++++
T Consensus 244 --------------------------------~vGg~~~~~i~ED~dl~~rl~~~G~~i~~~p~--a~~~~~~p~t~~~~ 289 (444)
T PRK14583 244 --------------------------------DVGYWSPDMITEDIDISWKLQLKHWSVFFEPR--GLCWILMPETLRGL 289 (444)
T ss_pred --------------------------------HcCCCCCCcccccHHHHHHHHHcCCeEEEeec--cEEeeeCCCCHHHH
Confidence 24679999999999999999999999999996 79999999999999
Q ss_pred HhHhHHhhccccccccc
Q 004562 485 LIQGTRWASGLIDVSIS 501 (745)
Q Consensus 485 l~Qr~RWa~G~~qi~~~ 501 (745)
++||.||++|.+|++++
T Consensus 290 ~~Qr~RW~~G~~~~~~~ 306 (444)
T PRK14583 290 WKQRLRWAQGGAEVFLK 306 (444)
T ss_pred HHHHHHHhCcHHHHHHH
Confidence 99999999999999875
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=7e-35 Score=326.70 Aligned_cols=233 Identities=25% Similarity=0.315 Sum_probs=182.3
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcc
Q 004562 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQ 173 (745)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~ 173 (745)
+|.|||+||+ |||+++++++|+.|++++|||. ++|+|+|||++|.|.+.+.| ++.+
T Consensus 53 ~p~vsviiP~---ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~~--------------~~~~----- 108 (439)
T COG1215 53 LPKVSVIIPA---YNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILEE--------------LGAE----- 108 (439)
T ss_pred CCceEEEEec---CCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHHH--------------HHhh-----
Confidence 5999999999 9999889999999999999998 89999999999977653322 2110
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEE
Q 004562 174 AYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVY 253 (745)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Y 253 (745)
+ + |.++-
T Consensus 109 ---------------------------~----------------------~------------------------~~~~~ 115 (439)
T COG1215 109 ---------------------------Y----------------------G------------------------PNFRV 115 (439)
T ss_pred ---------------------------c----------------------C------------------------cceEE
Confidence 0 0 11122
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCcc
Q 004562 254 VSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEH 333 (745)
Q Consensus 254 v~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~ 333 (745)
+..++ .+++|+||+|.++.. +++|+|+++|||++++ ||+|++++..|.|+.. +|.+|.|+.+.+.+..
T Consensus 116 ~~~~~----~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~~-~d~l~~~~~~f~~~~~---~~v~~~~~~~~~~~~~ 183 (439)
T COG1215 116 IYPEK----KNGGKAGALNNGLKR----AKGDVVVILDADTVPE-PDALRELVSPFEDPPV---GAVVGTPRIRNRPDPS 183 (439)
T ss_pred Eeccc----cCccchHHHHHHHhh----cCCCEEEEEcCCCCCC-hhHHHHHHhhhcCCCe---eEEeCCceeeecCChh
Confidence 21112 378999999999999 8899999999999987 9999999999998762 4689999887765321
Q ss_pred ChHHHHHHHhh-----hhhHhhhhhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhcccccc
Q 004562 334 DIYDGSLRSGY-----RLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNV 408 (745)
Q Consensus 334 d~~~~~~~~f~-----~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~ 408 (745)
...+......| .....+.+.....+++|++.++||++|.
T Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~------------------------------------ 227 (439)
T COG1215 184 NLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALE------------------------------------ 227 (439)
T ss_pred hhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHH------------------------------------
Confidence 12222222222 1222223333456789999999999992
Q ss_pred CCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHh
Q 004562 409 NGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQG 488 (745)
Q Consensus 409 ~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr 488 (745)
+.+||..+++|||.++++++|.+|||+.|+++ +.+++++|+|+.++++||
T Consensus 228 ----------------------------~~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr 277 (439)
T COG1215 228 ----------------------------EVGGWLEDTITEDADLTLRLHLRGYRVVYVPE--AIVWTEAPETLKELWRQR 277 (439)
T ss_pred ----------------------------HhCCCCCCceeccHHHHHHHHHCCCeEEEeec--ceEeeeCcccHHHHHHHH
Confidence 24579999999999999999999999999996 689999999999999999
Q ss_pred HHhhccccccccc
Q 004562 489 TRWASGLIDVSIS 501 (745)
Q Consensus 489 ~RWa~G~~qi~~~ 501 (745)
.||++|.+|++..
T Consensus 278 ~RW~~g~~~~~~~ 290 (439)
T COG1215 278 LRWARGGLQVLLL 290 (439)
T ss_pred HHHHcccceeeeh
Confidence 9999999999874
No 17
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=2.5e-33 Score=316.47 Aligned_cols=282 Identities=17% Similarity=0.186 Sum_probs=202.1
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004562 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (745)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r 170 (745)
++..|.|+|+||+ |||+ +.+.+||.|+.+++||.++++|+|+|||++|.|.+.+.|+.+
T Consensus 45 ~~~~P~vsVIIP~---yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~----------------- 103 (439)
T TIGR03111 45 IGKLPDITIIIPV---YNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQN----------------- 103 (439)
T ss_pred cCCCCCEEEEEEe---CCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHH-----------------
Confidence 3568999999999 9999 799999999999999999999999999999988654443211
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcce
Q 004562 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (745)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~ 250 (745)
. .|+
T Consensus 104 -----------------------------~-----------------------------------------------~~~ 107 (439)
T TIGR03111 104 -----------------------------E-----------------------------------------------FPG 107 (439)
T ss_pred -----------------------------h-----------------------------------------------CCC
Confidence 0 011
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc-CCCCCCcEEEEcCCccccc
Q 004562 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHN 329 (745)
Q Consensus 251 l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n 329 (745)
+..+.-++ ++|||+|+|.|++. ++||+|+++|||+++. ||++++++..|. ||+ ++.|++.+.-..
T Consensus 108 v~v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD~~~~-~d~L~~l~~~f~~~~~----v~~v~g~~~~~~ 173 (439)
T TIGR03111 108 LSLRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSDGKLH-KDAIKNMVTRFENNPD----IHAMTGVILTDK 173 (439)
T ss_pred eEEEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCCCCcC-hHHHHHHHHHHHhCCC----eEEEEeEEecCc
Confidence 22211122 47999999999999 8999999999999985 999999999986 665 777765432211
Q ss_pred C--Ccc-C---hHHHHHHHhhhhhH-----hhhh-hcCCcc-ccccccchhhhhccCCccccccchHhhhhhhCCchhHH
Q 004562 330 F--NEH-D---IYDGSLRSGYRLQW-----PGMD-GLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFI 396 (745)
Q Consensus 330 ~--~~~-d---~~~~~~~~f~~~~~-----~g~d-~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v 396 (745)
. +.. . .+..+.. +++..+ +... ..+..+ .+|+++++||+++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~-~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~------------------------ 228 (439)
T TIGR03111 174 ELIEKTKGRFLKLIRRCE-YFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETIL------------------------ 228 (439)
T ss_pred hhhhhhcchhhhHhHHhH-HHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHH------------------------
Confidence 0 000 0 1111111 121111 1111 223332 35788889999992
Q ss_pred hhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHH-CCCeEEEeCCCCCeeEe
Q 004562 397 KSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHC-KGWTSTYLDPSRPQFLG 475 (745)
Q Consensus 397 ~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~-~Gwrsvy~~~~~~~~~g 475 (745)
+.+||+.++++||++++++++. .|+++.|+++ +.++.
T Consensus 229 ----------------------------------------~vggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~--a~~~~ 266 (439)
T TIGR03111 229 ----------------------------------------KTQLYNSETVGEDTDMTFQIRELLDGKVYLCEN--AIFYV 266 (439)
T ss_pred ----------------------------------------HhCCCCCCCcCccHHHHHHHHHhcCCeEEECCC--CEEEE
Confidence 2468999999999999999985 6999999986 78999
Q ss_pred ccCCChHHHHhHhHHhhcccccccccccCccccCCCCCChhHHHHHHHHhHhhHhhHHHHHHHHHHhHHHHhcCCCcc
Q 004562 476 TSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLY 553 (745)
Q Consensus 476 ~aP~~l~~~l~Qr~RWa~G~~qi~~~r~~pl~~~~~~l~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~l~Ll~g~~~~ 553 (745)
++|+|++++++||.||++|.+|++....++... .+.++.++..+....... ...+|.+++.++++++.++|.++.
T Consensus 267 ~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 267 DPIDGLNKLYTQRQRWQRGELEVSHMFFESANK--SIKGFFSNFMVRRIMYDH-TFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred ECCcCHHHHHHHHHHHhccHHHHHHHHHhhhhh--chhhhhhHHHHHHHHhhH-hhHHHHHHHHHHHHHHHHhccHHH
Confidence 999999999999999999999998643333321 345566666654444444 557788888888888888776554
No 18
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.6e-32 Score=307.59 Aligned_cols=230 Identities=22% Similarity=0.266 Sum_probs=182.0
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004562 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (745)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r 170 (745)
....|.|+|+||+ |||+ +.+++|+.|+++++||. ++|+|+|||++|.|.+.+.+.++
T Consensus 50 ~~~~p~vsViIp~---yne~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~~~l~~~~~----------------- 106 (420)
T PRK11204 50 LKEYPGVSILVPC---YNEG-ENVEETISHLLALRYPN--YEVIAINDGSSDNTGEILDRLAA----------------- 106 (420)
T ss_pred cCCCCCEEEEEec---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHHHH-----------------
Confidence 4567999999999 9998 68999999999999994 89999999999977543322110
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcce
Q 004562 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (745)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~ 250 (745)
..|+
T Consensus 107 ----------------------------------------------------------------------------~~~~ 110 (420)
T PRK11204 107 ----------------------------------------------------------------------------QIPR 110 (420)
T ss_pred ----------------------------------------------------------------------------hCCc
Confidence 1234
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc-CCCCCCcEEEEcCCccccc
Q 004562 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHN 329 (745)
Q Consensus 251 l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n 329 (745)
+.++.+++ +++||+|+|.|++. +++|+++++|||.+++ ||++.+++..|. ||+ ++.||+.....|
T Consensus 111 v~~i~~~~-----n~Gka~aln~g~~~----a~~d~i~~lDaD~~~~-~d~L~~l~~~~~~~~~----v~~v~g~~~~~~ 176 (420)
T PRK11204 111 LRVIHLAE-----NQGKANALNTGAAA----ARSEYLVCIDGDALLD-PDAAAYMVEHFLHNPR----VGAVTGNPRIRN 176 (420)
T ss_pred EEEEEcCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-hhHHHHHHHHHHhCCC----eEEEECCceecc
Confidence 67776554 46799999999999 8999999999999986 999999999984 665 999999877665
Q ss_pred CCccChHHH----HHHHhhhhhHhhhhhcCCcc-ccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhcc
Q 004562 330 FNEHDIYDG----SLRSGYRLQWPGMDGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYE 404 (745)
Q Consensus 330 ~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~ 404 (745)
.. ...+. +....+.....+....+... .+|+++++||+++.
T Consensus 177 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~-------------------------------- 222 (420)
T PRK11204 177 RS--TLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALH-------------------------------- 222 (420)
T ss_pred ch--hHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHH--------------------------------
Confidence 32 22222 11222233333334444443 35888999999992
Q ss_pred ccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHH
Q 004562 405 HKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDV 484 (745)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~ 484 (745)
+.+||+++.++||++++++++++||++.|+++ +.++++.|+|++++
T Consensus 223 --------------------------------~vgg~~~~~~~ED~~l~~rl~~~G~~i~~~p~--~~~~~~~p~t~~~~ 268 (420)
T PRK11204 223 --------------------------------EVGYWSTDMITEDIDISWKLQLRGWDIRYEPR--ALCWILMPETLKGL 268 (420)
T ss_pred --------------------------------HhCCCCCCcccchHHHHHHHHHcCCeEEeccc--cEEEeECcccHHHH
Confidence 24679999999999999999999999999986 78999999999999
Q ss_pred HhHhHHhhccccccccc
Q 004562 485 LIQGTRWASGLIDVSIS 501 (745)
Q Consensus 485 l~Qr~RWa~G~~qi~~~ 501 (745)
++||.||++|++|.+++
T Consensus 269 ~~Qr~RW~~G~~~~l~~ 285 (420)
T PRK11204 269 WKQRLRWAQGGAEVLLK 285 (420)
T ss_pred HHHHHHHhcCHHHHHHH
Confidence 99999999999999874
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.98 E-value=7.9e-30 Score=289.71 Aligned_cols=265 Identities=18% Similarity=0.151 Sum_probs=183.0
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHH-HcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004562 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSA-MALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (745)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~-~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r 170 (745)
...|+|+|+||+ |||+ +++.+||.++ .++|||. ++|+|+||+++|.|.+.+.+.++
T Consensus 63 ~~~p~vaIlIPA---~NE~-~vI~~~l~s~L~~ldY~~--~eIiVv~d~ndd~T~~~v~~l~~----------------- 119 (504)
T PRK14716 63 VPEKRIAIFVPA---WREA-DVIGRMLEHNLATLDYEN--YRIFVGTYPNDPATLREVDRLAA----------------- 119 (504)
T ss_pred CCCCceEEEEec---cCch-hHHHHHHHHHHHcCCCCC--eEEEEEECCCChhHHHHHHHHHH-----------------
Confidence 458999999999 9999 6999999986 4789974 99999999999988654433211
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcce
Q 004562 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (745)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~ 250 (745)
+| |+
T Consensus 120 ---------------------------------------------------~~-------------------------p~ 123 (504)
T PRK14716 120 ---------------------------------------------------RY-------------------------PR 123 (504)
T ss_pred ---------------------------------------------------HC-------------------------CC
Confidence 11 22
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcC--CCCCC---CEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCc
Q 004562 251 LVYVSREKSPEHLHHFKGGALNVLLRVSG--VISNS---PYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQ 325 (745)
Q Consensus 251 l~Yv~R~krp~~~~~~KAGaLN~~l~~s~--~~s~g---~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq 325 (745)
++.+. .+++| .++||+|||.+++..- ....| |+|+++|||.++. |++|+.....+.| .++||.|.
T Consensus 124 v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~-Pd~Lr~~~~~~~~------~~~VQ~pv 193 (504)
T PRK14716 124 VHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIH-PLELRLYNYLLPR------HDFVQLPV 193 (504)
T ss_pred eEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcC-ccHHHHHHhhcCC------CCEEecce
Confidence 32222 12222 3689999999997621 00244 9999999999986 9999876555443 56899998
Q ss_pred ccccCCccCh----HHHHHHHhhhhhHhhhhhcCCcc-ccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhh
Q 004562 326 KFHNFNEHDI----YDGSLRSGYRLQWPGMDGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLH 400 (745)
Q Consensus 326 ~f~n~~~~d~----~~~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~ 400 (745)
...+.+.+.. |..+....+...+..++.++++. ++|+|+.+||++|.. +
T Consensus 194 ~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~-----------l--------------- 247 (504)
T PRK14716 194 FSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALER-----------L--------------- 247 (504)
T ss_pred eccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHH-----------H---------------
Confidence 7655432221 11111112233355678888765 679999999999921 0
Q ss_pred hhccccccCCccchhhHHHhhhhhccccccccccccccc-cccCCCccchHHHHHHHHHCCCeEEEeCCCC---------
Q 004562 401 QSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVSEDFFTGFILHCKGWTSTYLDPSR--------- 470 (745)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~-G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~--------- 470 (745)
.++ ..+ +|+.+++|||+++|++++.+|||++|++.+.
T Consensus 248 -----------------~~~----------------~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~ 294 (504)
T PRK14716 248 -----------------AAE----------------RGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDR 294 (504)
T ss_pred -----------------Hhh----------------cCCCCCCCCCcchHHHHHHHHHHCCCEEEEeccccccccccccc
Confidence 000 012 3999999999999999999999999998630
Q ss_pred ----CeeEeccCCChHHHHhHhHHhhccc-ccccccc-c-CccccCCCCCChhHHHHHHHHhH
Q 004562 471 ----PQFLGTSTTNLNDVLIQGTRWASGL-IDVSISR-F-CPLLYGPSRMSLLLSMCYGEMSL 526 (745)
Q Consensus 471 ----~~~~g~aP~~l~~~l~Qr~RWa~G~-~qi~~~r-~-~pl~~~~~~l~~~qrl~Y~~~~~ 526 (745)
....+++|+|++++++||.||+.|. +|...+. . .++. .+.+.+++|..-+...+
T Consensus 295 ~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~--~~~~~~rdr~~~~~~~~ 355 (504)
T PRK14716 295 RGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA--TKYMLWRDRKGLLTNLL 355 (504)
T ss_pred ccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh--hhhhHHHHHHHHHHHHH
Confidence 1345889999999999999999995 7875421 0 1111 23466778877765433
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.97 E-value=2.6e-30 Score=265.77 Aligned_cols=227 Identities=26% Similarity=0.356 Sum_probs=175.8
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004562 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (745)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~ 174 (745)
|+|+|+||+ |||+ +.+.++|.|+++++||.++++|+|+|| ++|.|.+.+.+..+
T Consensus 1 p~vSViIp~---yNe~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~--------------------- 54 (232)
T cd06437 1 PMVTVQLPV---FNEK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVE--------------------- 54 (232)
T ss_pred CceEEEEec---CCcH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHH---------------------
Confidence 689999999 9998 699999999999999999999999998 88888765443211
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEE
Q 004562 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (745)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv 254 (745)
.+.+ .-++++++
T Consensus 55 -------------------------~~~~-------------------------------------------~~~~i~~~ 66 (232)
T cd06437 55 -------------------------EYAA-------------------------------------------QGVNIKHV 66 (232)
T ss_pred -------------------------HHhh-------------------------------------------cCCceEEE
Confidence 0000 01246777
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccC
Q 004562 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD 334 (745)
Q Consensus 255 ~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d 334 (745)
.+.++ +++|++|+|.|++. ++||||+++|||++++ |++|+++..++.|++ +++||++..+.|.+.+
T Consensus 67 ~~~~~----~G~k~~a~n~g~~~----a~~~~i~~~DaD~~~~-~~~l~~~~~~~~~~~----v~~v~~~~~~~~~~~~- 132 (232)
T cd06437 67 RRADR----TGYKAGALAEGMKV----AKGEYVAIFDADFVPP-PDFLQKTPPYFADPK----LGFVQTRWGHINANYS- 132 (232)
T ss_pred ECCCC----CCCchHHHHHHHHh----CCCCEEEEEcCCCCCC-hHHHHHhhhhhcCCC----eEEEecceeeEcCCCc-
Confidence 66554 46799999999999 8999999999999986 999999888887776 9999987766554221
Q ss_pred hHHH----HHHHhhhhhHhhhhhcCCc-cccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccC
Q 004562 335 IYDG----SLRSGYRLQWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN 409 (745)
Q Consensus 335 ~~~~----~~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~ 409 (745)
.... ....++...+.+....+.. .++|+++++||+++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~------------------------------------- 175 (232)
T cd06437 133 LLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIE------------------------------------- 175 (232)
T ss_pred hhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHH-------------------------------------
Confidence 1111 1112333334444433433 357999999999982
Q ss_pred CccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhH
Q 004562 410 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT 489 (745)
Q Consensus 410 ~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~ 489 (745)
+.+||+..+..||+++++|++.+||++.|++. +.+++..|+|+.++++||.
T Consensus 176 ---------------------------~vgg~~~~~~~ED~~l~~rl~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~ 226 (232)
T cd06437 176 ---------------------------DAGGWNHDTLTEDLDLSYRAQLKGWKFVYLDD--VVVPAELPASMSAYRSQQH 226 (232)
T ss_pred ---------------------------HhCCCCCCcchhhHHHHHHHHHCCCeEEEecc--ceeeeeCCcCHHHHHHHHH
Confidence 23579888899999999999999999999986 7899999999999999999
Q ss_pred Hhhccc
Q 004562 490 RWASGL 495 (745)
Q Consensus 490 RWa~G~ 495 (745)
||++|.
T Consensus 227 rW~~g~ 232 (232)
T cd06437 227 RWSKGP 232 (232)
T ss_pred HhccCC
Confidence 999994
No 21
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.97 E-value=5.8e-30 Score=261.49 Aligned_cols=229 Identities=37% Similarity=0.527 Sum_probs=185.8
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004562 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (745)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~ 174 (745)
|.|+|+||+ |||+++.+++++.|+++++||.++++|+|+|||++|.|.+.+.+..
T Consensus 1 p~vsviip~---~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~---------------------- 55 (234)
T cd06421 1 PTVDVFIPT---YNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELG---------------------- 55 (234)
T ss_pred CceEEEEec---CCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhh----------------------
Confidence 789999999 9998789999999999999999999999999999996653222100
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEE
Q 004562 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (745)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv 254 (745)
. . .++.++
T Consensus 56 -------------------------------~----------------------------------------~-~~~~~~ 63 (234)
T cd06421 56 -------------------------------V----------------------------------------E-YGYRYL 63 (234)
T ss_pred -------------------------------c----------------------------------------c-cCceEE
Confidence 0 0 023555
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcC-CCCCCcEEEEcCCcccccCCcc
Q 004562 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD-PKTSSSLAFVQFPQKFHNFNEH 333 (745)
Q Consensus 255 ~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D-~~~~~~vg~VQ~Pq~f~n~~~~ 333 (745)
.++++ .++|+||+|.|++. ++||||+++|+|.+++ |+++.+++..|.+ ++ ++.|++++.+.+.+..
T Consensus 64 ~~~~~----~~~~~~~~n~~~~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~~----~~~v~~~~~~~~~~~~ 130 (234)
T cd06421 64 TRPDN----RHAKAGNLNNALAH----TTGDFVAILDADHVPT-PDFLRRTLGYFLDDPK----VALVQTPQFFYNPDPF 130 (234)
T ss_pred EeCCC----CCCcHHHHHHHHHh----CCCCEEEEEccccCcC-ccHHHHHHHHHhcCCC----eEEEecceEEecCCcc
Confidence 55543 57899999999998 7999999999999986 9999999999975 55 9999999888766432
Q ss_pred C----hHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccC
Q 004562 334 D----IYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN 409 (745)
Q Consensus 334 d----~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~ 409 (745)
+ .+......++.....+...++...++|++.++||+++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~------------------------------------- 173 (234)
T cd06421 131 DWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALD------------------------------------- 173 (234)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHH-------------------------------------
Confidence 1 22333344555566666666677888999999999992
Q ss_pred CccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhH
Q 004562 410 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT 489 (745)
Q Consensus 410 ~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~ 489 (745)
+.+||+...+.||++++++++++||++.|.++ +.+.+..|++++++++|+.
T Consensus 174 ---------------------------~ig~~~~~~~~eD~~l~~r~~~~g~~i~~~~~--~~~~~~~~~~~~~~~~q~~ 224 (234)
T cd06421 174 ---------------------------EIGGFPTDSVTEDLATSLRLHAKGWRSVYVPE--PLAAGLAPETLAAYIKQRL 224 (234)
T ss_pred ---------------------------HhCCCCccceeccHHHHHHHHHcCceEEEecC--ccccccCCccHHHHHHHHH
Confidence 23568878889999999999999999999997 6889999999999999999
Q ss_pred Hhhccccccc
Q 004562 490 RWASGLIDVS 499 (745)
Q Consensus 490 RWa~G~~qi~ 499 (745)
||..|++|++
T Consensus 225 rw~~~~~~~~ 234 (234)
T cd06421 225 RWARGMLQIL 234 (234)
T ss_pred HHhcCCeeeC
Confidence 9999999964
No 22
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.97 E-value=3.6e-29 Score=259.43 Aligned_cols=232 Identities=24% Similarity=0.297 Sum_probs=178.5
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004562 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (745)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~ 174 (745)
|.|+|+||+ |||+ +.+.+|+.|+++++||.++++|+|+|||++|.|.+.+.+...
T Consensus 1 p~vsIiIp~---~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~--------------------- 55 (241)
T cd06427 1 PVYTILVPL---YKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRL--------------------- 55 (241)
T ss_pred CeEEEEEec---CCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhcc---------------------
Confidence 789999999 9998 699999999999999988999999999999977643321100
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEE
Q 004562 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (745)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv 254 (745)
....+++++
T Consensus 56 -----------------------------------------------------------------------~~~~~i~~~ 64 (241)
T cd06427 56 -----------------------------------------------------------------------PSIFRVVVV 64 (241)
T ss_pred -----------------------------------------------------------------------CCCeeEEEe
Confidence 000123444
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccC
Q 004562 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD 334 (745)
Q Consensus 255 ~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d 334 (745)
...+ ..+|++|+|.|++. ++||+|+++|+|.+++ |+++.+++.+|.+. ++++++||++..+.|...+-
T Consensus 65 ~~~~-----~~G~~~a~n~g~~~----a~gd~i~~~DaD~~~~-~~~l~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~ 132 (241)
T cd06427 65 PPSQ-----PRTKPKACNYALAF----ARGEYVVIYDAEDAPD-PDQLKKAVAAFARL--DDKLACVQAPLNYYNARENW 132 (241)
T ss_pred cCCC-----CCchHHHHHHHHHh----cCCCEEEEEcCCCCCC-hHHHHHHHHHHHhc--CCCEEEEeCceEeeCCCccH
Confidence 3222 46899999999999 8999999999999987 99999999998631 23599999987777643211
Q ss_pred ---hHHHHHHHhhhhhHhhhhhcCCcc-ccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCC
Q 004562 335 ---IYDGSLRSGYRLQWPGMDGLKGPF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNG 410 (745)
Q Consensus 335 ---~~~~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~ 410 (745)
.+..+....++...++....+.+. ++|+++++||+++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~-------------------------------------- 174 (241)
T cd06427 133 LTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLR-------------------------------------- 174 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHH--------------------------------------
Confidence 011112233444556666556554 46888899999992
Q ss_pred ccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHH
Q 004562 411 ENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTR 490 (745)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~R 490 (745)
+.+||+....+||++.++|++++|||+.+++. ...+..|+|++++++||.|
T Consensus 175 --------------------------~vgg~~~~~~~eD~~l~~rl~~~G~r~~~~~~---~~~~~~~~~~~~~~~q~~R 225 (241)
T cd06427 175 --------------------------ELGGWDPFNVTEDADLGLRLARAGYRTGVLNS---TTLEEANNALGNWIRQRSR 225 (241)
T ss_pred --------------------------HcCCCCcccchhhHHHHHHHHHCCceEEEecc---cccccCcHhHHHHHHHHHH
Confidence 23578877889999999999999999999974 4578999999999999999
Q ss_pred hhccccccccc
Q 004562 491 WASGLIDVSIS 501 (745)
Q Consensus 491 Wa~G~~qi~~~ 501 (745)
|+.|.+|++..
T Consensus 226 w~~g~~~~~~~ 236 (241)
T cd06427 226 WIKGYMQTWLV 236 (241)
T ss_pred HhccHHHHHHH
Confidence 99999999863
No 23
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.96 E-value=4.4e-27 Score=277.17 Aligned_cols=239 Identities=19% Similarity=0.225 Sum_probs=172.1
Q ss_pred CCCCCCCCceEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcc
Q 004562 88 LPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAM-ALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYR 166 (745)
Q Consensus 88 l~~~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~-~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~ 166 (745)
++ .++.|+|+|+||+ |||+ .++.+|+.+++ ++|||+ ++|+++||++++.|.+++.+.+ +
T Consensus 57 l~-~~~~~~vsIlVPa---~nE~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~l~----------~--- 116 (727)
T PRK11234 57 LY-KPDEKPLAIMVPA---WNET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDAVC----------A--- 116 (727)
T ss_pred cc-cCCCCCEEEEEec---Ccch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHHHH----------H---
Confidence 44 4567999999999 9999 69999999987 799998 9999999888887765433321 1
Q ss_pred cccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhcccc
Q 004562 167 IKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLV 246 (745)
Q Consensus 167 v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~ 246 (745)
.
T Consensus 117 ---------------------------------~---------------------------------------------- 117 (727)
T PRK11234 117 ---------------------------------R---------------------------------------------- 117 (727)
T ss_pred ---------------------------------H----------------------------------------------
Confidence 1
Q ss_pred CcceEEEEeccCCCCCCCCChHHHHHHHHHhcCCC-----CCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEE
Q 004562 247 EMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVI-----SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFV 321 (745)
Q Consensus 247 ~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~-----s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V 321 (745)
+|++..+.-+ ++| .++||+|||.++...-.. ...+++++.|||.++. |++|+ .+.++.++. ++|
T Consensus 118 -~p~~~~v~~~-~~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~-pd~L~-~~~~l~~~~-----~~V 186 (727)
T PRK11234 118 -FPNVHKVVCA-RPG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVIS-PMELR-LFNYLVERK-----DLI 186 (727)
T ss_pred -CCCcEEEEeC-CCC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCC-hhHHH-HHHhhcCCC-----CeE
Confidence 1222222221 233 468999999999873100 2346788899999986 99997 667776542 799
Q ss_pred cCCcccccCCccChHH----HHHHHhhhhhHhhhhhcCCcc-ccccccch-hh--hhccCCccccccchHhhhhhhCCch
Q 004562 322 QFPQKFHNFNEHDIYD----GSLRSGYRLQWPGMDGLKGPF-LTGTGHYI-RR--ESLYGNFKHKGIDLAELKDTFGESN 393 (745)
Q Consensus 322 Q~Pq~f~n~~~~d~~~----~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~-RR--~aL~~~~~~~~~d~~~~~~~~~~~~ 393 (745)
|.|....+.+.+...+ .+....+...+++++.++++. +.|+|+.| || ++|.
T Consensus 187 Q~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~--------------------- 245 (727)
T PRK11234 187 QIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALL--------------------- 245 (727)
T ss_pred eecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHH---------------------
Confidence 9996633322222222 233333445678888997764 56999999 55 3441
Q ss_pred hHHhhhhhhccccccCCccchhhHHHhhhhhccccccccccccccc---cccCCCccchHHHHHHHHHCCCeEEEeCCC-
Q 004562 394 LFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV---GFSYQSVSEDFFTGFILHCKGWTSTYLDPS- 469 (745)
Q Consensus 394 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~---G~~~~svtED~~t~~rl~~~Gwrsvy~~~~- 469 (745)
+.+ ||+.+++|||+++|++|+.+||+++|++..
T Consensus 246 -------------------------------------------~~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v 282 (727)
T PRK11234 246 -------------------------------------------EDGDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPV 282 (727)
T ss_pred -------------------------------------------HhcCCCCcCCCcchHHHHHHHHHHHCCCEEEEccccc
Confidence 122 599999999999999999999999999821
Q ss_pred --------------------CCeeEeccCCChHHHHhHhHHhhcc-cccccc
Q 004562 470 --------------------RPQFLGTSTTNLNDVLIQGTRWASG-LIDVSI 500 (745)
Q Consensus 470 --------------------~~~~~g~aP~~l~~~l~Qr~RWa~G-~~qi~~ 500 (745)
...+++..|+|+++.++||.||..| .+|.+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 283 VDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred ccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 1347889999999999999999999 577653
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.96 E-value=8.1e-28 Score=247.14 Aligned_cols=228 Identities=22% Similarity=0.316 Sum_probs=171.2
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchH-hHHHHHHhhhhhhhhhhhcccccCCccccc
Q 004562 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLR-GMREAFRFAKWWIPFCRRYRIKTICPQAYF 176 (745)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~-~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf 176 (745)
+|+||| |||+++.+.+++.|+.+++||. .+|+|+|||++|.|.. .+.+. |++++
T Consensus 1 siiip~---~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~~----------~~~~~---------- 55 (236)
T cd06435 1 SIHVPC---YEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEAH----------CAQLG---------- 55 (236)
T ss_pred CeeEee---CCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHHH----------HHHhC----------
Confidence 589999 9998789999999999999997 7999999999997642 11110 00000
Q ss_pred cccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEec
Q 004562 177 SEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSR 256 (745)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R 256 (745)
+++.++..
T Consensus 56 ------------------------------------------------------------------------~~i~~i~~ 63 (236)
T cd06435 56 ------------------------------------------------------------------------ERFRFFHV 63 (236)
T ss_pred ------------------------------------------------------------------------CcEEEEEc
Confidence 13456655
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChH
Q 004562 257 EKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIY 336 (745)
Q Consensus 257 ~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (745)
+++ .++|+||+|.|++.+. .++|+|+++|+|..++ |++|.+++..|.+++ ++.|++++.+.+.. ..++
T Consensus 64 ~~~----~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~~~-~~~~ 131 (236)
T cd06435 64 EPL----PGAKAGALNYALERTA--PDAEIIAVIDADYQVE-PDWLKRLVPIFDDPR----VGFVQAPQDYRDGE-ESLF 131 (236)
T ss_pred CCC----CCCchHHHHHHHHhcC--CCCCEEEEEcCCCCcC-HHHHHHHHHHhcCCC----eeEEecCccccCCC-ccHH
Confidence 443 4679999999999843 3589999999999986 999999999987665 99999887665431 2233
Q ss_pred HHHH----HHhhhhhHhhhhhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCCcc
Q 004562 337 DGSL----RSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGEN 412 (745)
Q Consensus 337 ~~~~----~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~ 412 (745)
.... ..++..........+.....|+++++||+++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~---------------------------------------- 171 (236)
T cd06435 132 KRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALD---------------------------------------- 171 (236)
T ss_pred HHHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHHH----------------------------------------
Confidence 2111 11122112222333344567888899999982
Q ss_pred chhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHHhh
Q 004562 413 LSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWA 492 (745)
Q Consensus 413 ~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~RWa 492 (745)
+.+||+.+...||+++++|++++||++.|+++ +..++..|+++.++++||.||+
T Consensus 172 ------------------------~iGgf~~~~~~eD~dl~~r~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~q~~rw~ 225 (236)
T cd06435 172 ------------------------DVGGWDEWCITEDSELGLRMHEAGYIGVYVAQ--SYGHGLIPDTFEAFKKQRFRWA 225 (236)
T ss_pred ------------------------HhCCCCCccccchHHHHHHHHHCCcEEEEcch--hhccCcCcccHHHHHHHHHHHh
Confidence 23578888889999999999999999999986 5778999999999999999999
Q ss_pred cccccccc
Q 004562 493 SGLIDVSI 500 (745)
Q Consensus 493 ~G~~qi~~ 500 (745)
+|++|++.
T Consensus 226 ~g~~~~~~ 233 (236)
T cd06435 226 YGAVQILK 233 (236)
T ss_pred cchhhhhh
Confidence 99999986
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.95 E-value=1.9e-28 Score=250.15 Aligned_cols=224 Identities=27% Similarity=0.329 Sum_probs=144.1
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004562 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (745)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~ 174 (745)
|.|+|+||+ |||+. .+.++|.|+++++||+ ++|+|+||++++.|.+.+.+..+ ++
T Consensus 1 P~v~Vvip~---~~~~~-~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~~~~~~~~----------~~--------- 55 (228)
T PF13641_consen 1 PRVSVVIPA---YNEDD-VLRRCLESLLAQDYPR--LEVVVVDDGSDDETAEILRALAA----------RY--------- 55 (228)
T ss_dssp --EEEE--B---SS-HH-HHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCTTHHHHHH----------TT---------
T ss_pred CEEEEEEEe---cCCHH-HHHHHHHHHHcCCCCC--eEEEEEECCCChHHHHHHHHHHH----------Hc---------
Confidence 789999999 99994 9999999999999965 99999999999876543332110 00
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEE
Q 004562 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (745)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv 254 (745)
. . -++.++
T Consensus 56 ---------------------------~----------------------~-----------------------~~v~vi 63 (228)
T PF13641_consen 56 ---------------------------P----------------------R-----------------------VRVRVI 63 (228)
T ss_dssp ---------------------------G----------------------G------------------------GEEEE
T ss_pred ---------------------------C----------------------C-----------------------CceEEe
Confidence 0 0 025677
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccC
Q 004562 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD 334 (745)
Q Consensus 255 ~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d 334 (745)
.+++++| ..+|++|+|.+++. .++|+|+++|+|.+++ |++|++++.+|.+|+ +++||++..+.+. . .
T Consensus 64 ~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~~~-p~~l~~~~~~~~~~~----~~~v~~~~~~~~~-~-~ 130 (228)
T PF13641_consen 64 RRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTVLD-PDWLERLLAAFADPG----VGAVGGPVFPDND-R-N 130 (228)
T ss_dssp E----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBSS------EEEEEEEETTC-C-C
T ss_pred ecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcEEC-HHHHHHHHHHHHhCC----CCeEeeeEeecCC-C-C
Confidence 6655432 24799999999999 7899999999999986 999999999997776 9999988766542 2 1
Q ss_pred hHHHHHHHhh----hhhHhhhhhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCC
Q 004562 335 IYDGSLRSGY----RLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNG 410 (745)
Q Consensus 335 ~~~~~~~~f~----~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~ 410 (745)
.+..-...++ .....+....+...++|+++++||+++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~-------------------------------------- 172 (228)
T PF13641_consen 131 WLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALE-------------------------------------- 172 (228)
T ss_dssp EEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHH--------------------------------------
T ss_pred HHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHH--------------------------------------
Confidence 1111111111 1123334445556678999999999992
Q ss_pred ccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHH
Q 004562 411 ENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTR 490 (745)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~R 490 (745)
+.+||+.....||.+++++++++||++.|++. +.++...|.+++++++||.|
T Consensus 173 --------------------------~~g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~R 224 (228)
T PF13641_consen 173 --------------------------EVGGFDPFILGEDFDLCLRLRAAGWRIVYAPD--ALVYHEEPSSLKAFFKQRFR 224 (228)
T ss_dssp --------------------------HH-S--SSSSSHHHHHHHHHHHTT--EEEEEE--EEEEE--SSSTHHHHHHHHH
T ss_pred --------------------------HhCCCCCCCcccHHHHHHHHHHCCCcEEEECC--cEEEEeCCCCHHHHHHHHhc
Confidence 23578888889999999999999999999985 68999999999999999999
Q ss_pred hhcc
Q 004562 491 WASG 494 (745)
Q Consensus 491 Wa~G 494 (745)
|++|
T Consensus 225 W~~g 228 (228)
T PF13641_consen 225 WSRG 228 (228)
T ss_dssp HH--
T ss_pred cCcC
Confidence 9988
No 26
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.94 E-value=9.6e-26 Score=249.65 Aligned_cols=227 Identities=15% Similarity=0.168 Sum_probs=167.1
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCC
Q 004562 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTIC 171 (745)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~ 171 (745)
...|+|+|+||+ |||+. .+.+|+.|++++|||. +||+|+||+++|.|.+.+.+..
T Consensus 38 ~~~p~VSViiP~---~nee~-~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~~~------------------- 92 (373)
T TIGR03472 38 RAWPPVSVLKPL---HGDEP-ELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRRLR------------------- 92 (373)
T ss_pred CCCCCeEEEEEC---CCCCh-hHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHHHH-------------------
Confidence 447999999999 99995 7899999999999997 8999999999997754332211
Q ss_pred ccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceE
Q 004562 172 PQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLL 251 (745)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l 251 (745)
+. ||. .++
T Consensus 93 ---------------------------~~----------------------~p~-----------------------~~i 100 (373)
T TIGR03472 93 ---------------------------AD----------------------FPD-----------------------ADI 100 (373)
T ss_pred ---------------------------Hh----------------------CCC-----------------------Cce
Confidence 00 100 135
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCC
Q 004562 252 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFN 331 (745)
Q Consensus 252 ~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~ 331 (745)
.++..++++| .++|++|+|++++. ++||+|+++|||.+++ ||+|++++..|.||+ ++.|+++....+
T Consensus 101 ~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~~~-p~~L~~lv~~~~~~~----v~~V~~~~~~~~-- 167 (373)
T TIGR03472 101 DLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSDISVG-PDYLRQVVAPLADPD----VGLVTCLYRGRP-- 167 (373)
T ss_pred EEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCCcC-hhHHHHHHHHhcCCC----cceEeccccCCC--
Confidence 5665444433 45799999999998 8999999999999986 999999999998877 899998643222
Q ss_pred ccChHHHHHH-H-----hhhhhHhhhhhcCC-ccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhcc
Q 004562 332 EHDIYDGSLR-S-----GYRLQWPGMDGLKG-PFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYE 404 (745)
Q Consensus 332 ~~d~~~~~~~-~-----f~~~~~~g~d~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~ 404 (745)
.+. +.+... . ++..... .+..+. .++.|++.++||+++.
T Consensus 168 ~~~-~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~a~RR~~l~-------------------------------- 213 (373)
T TIGR03472 168 VPG-FWSRLGAMGINHNFLPSVMV-ARALGRARFCFGATMALRRATLE-------------------------------- 213 (373)
T ss_pred CCC-HHHHHHHHHhhhhhhHHHHH-HHhccCCccccChhhheeHHHHH--------------------------------
Confidence 112 222211 1 1111111 122232 3467888899999992
Q ss_pred ccccCCccchhhHHHhhhhhccccccccccccccccccC--CCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChH
Q 004562 405 HKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLN 482 (745)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~--~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~ 482 (745)
+.+||+. ++++||++++.++.++||++.|++. +......|+|++
T Consensus 214 --------------------------------~iGGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~--~v~~~~~~~s~~ 259 (373)
T TIGR03472 214 --------------------------------AIGGLAALAHHLADDYWLGELVRALGLRVVLAPV--VVDTDVHETSFA 259 (373)
T ss_pred --------------------------------HcCChHHhcccchHHHHHHHHHHHcCCeEEecch--hhhcCCCccCHH
Confidence 2457774 5789999999999999999999875 577788889999
Q ss_pred HHHhHhHHhhcccc
Q 004562 483 DVLIQGTRWASGLI 496 (745)
Q Consensus 483 ~~l~Qr~RWa~G~~ 496 (745)
++++||.||++...
T Consensus 260 ~~~~q~~RW~r~~~ 273 (373)
T TIGR03472 260 TLLAHELRWSRTIR 273 (373)
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999986554
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.94 E-value=1.8e-26 Score=240.57 Aligned_cols=171 Identities=19% Similarity=0.105 Sum_probs=115.0
Q ss_pred HHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhh-cCCCCCCcEEEEcCCcccccCCccChHHHHHHHhh----
Q 004562 270 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGY---- 344 (745)
Q Consensus 270 aLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~---- 344 (745)
++|.++.. +++|||+++|||.+++ |++|++++.+| .||+ +|.|++.+...|... .....-+..-|
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~~-~~~l~~l~~~~~~~p~----vg~v~g~~~~~~~~~-~~~~~~q~~ey~~~~ 133 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKFD-PDSIVQLYKAMDKDPE----IGGVCGEIHPMGKKQ-GPLVMYQVFEYAISH 133 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcCC-HhHHHHHHHHHHhCCC----EEEEEeeeEEcCCcc-hhHHHhHheehhhhh
Confidence 45666666 7999999999999986 99999999998 4776 999999877765421 22222111111
Q ss_pred hhhHhhhhhcCCc-cccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCCccchhhHHHhhhh
Q 004562 345 RLQWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEV 423 (745)
Q Consensus 345 ~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (745)
.....+....+.. ...|++.++|++++....... ..
T Consensus 134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~--------------~~----------------------------- 170 (244)
T cd04190 134 WLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGK--------------GP----------------------------- 170 (244)
T ss_pred hhcccHHHcCCceEECCCceEEEEehhhcCCcccc--------------cc-----------------------------
Confidence 1111223334443 346889999999995411000 00
Q ss_pred hccccccccccccccc-cccCCCccchHHHHHHHHHCCCeEEE--eCCCCCeeEeccCCChHHHHhHhHHhhccccc
Q 004562 424 LASCSYEHQTKWGEEV-GFSYQSVSEDFFTGFILHCKGWTSTY--LDPSRPQFLGTSTTNLNDVLIQGTRWASGLID 497 (745)
Q Consensus 424 v~~c~ye~~t~wg~~~-G~~~~svtED~~t~~rl~~~Gwrsvy--~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~q 497 (745)
...+.|...+. .++ +....+++||.+++++|..+||++.| +++ +.+++++|+|++++++||.||++|++.
T Consensus 171 ~~~~~~~~~~~--~~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~--a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 171 LLDYAYLTNTV--DSLHKKNNLDLGEDRILCTLLLKAGPKRKYLYVPG--AVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred chhhccccCcc--cchHHHHHHhHhcccceeHHHhccCCccEEEEecc--cEEEEECCCCHHHHHHHhHhhhccccc
Confidence 00000000000 111 23445789999999999999999999 875 789999999999999999999999874
No 28
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.93 E-value=3.8e-25 Score=222.20 Aligned_cols=193 Identities=16% Similarity=0.194 Sum_probs=153.9
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004562 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (745)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~ 174 (745)
|.|+|+||+ |||+. .+.++|.|+++++||. ++|+|+|||++|.|.+.+.+..+ +
T Consensus 1 p~vsviip~---~n~~~-~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~~~----------~---------- 54 (196)
T cd02520 1 PGVSILKPL---CGVDP-NLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKLIA----------K---------- 54 (196)
T ss_pred CCeEEEEec---CCCCc-cHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHHHH----------H----------
Confidence 789999999 99985 6899999999999997 99999999999977653332110 0
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEE
Q 004562 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (745)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv 254 (745)
||.+ .+.++
T Consensus 55 ------------------------------------------------~~~~-----------------------~~~~~ 63 (196)
T cd02520 55 ------------------------------------------------YPNV-----------------------DARLL 63 (196)
T ss_pred ------------------------------------------------CCCC-----------------------cEEEE
Confidence 0000 13344
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccC
Q 004562 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD 334 (745)
Q Consensus 255 ~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d 334 (745)
..+++.| ..+|++|+|.|++. ++||+++++|+|..++ |++|.+++..+.+++ ++.|++.
T Consensus 64 ~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~---------- 122 (196)
T cd02520 64 IGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSDISVP-PDYLRRMVAPLMDPG----VGLVTCL---------- 122 (196)
T ss_pred ecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCceEC-hhHHHHHHHHhhCCC----CCeEEee----------
Confidence 4433322 34799999999999 8899999999999986 999999999987766 7888753
Q ss_pred hHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCCccch
Q 004562 335 IYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLS 414 (745)
Q Consensus 335 ~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~ 414 (745)
...|+++++||+++.
T Consensus 123 -----------------------~~~g~~~~~r~~~~~------------------------------------------ 137 (196)
T cd02520 123 -----------------------CAFGKSMALRREVLD------------------------------------------ 137 (196)
T ss_pred -----------------------cccCceeeeEHHHHH------------------------------------------
Confidence 456889999999982
Q ss_pred hhHHHhhhhhccccccccccccccccccC--CCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHHhh
Q 004562 415 NVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWA 492 (745)
Q Consensus 415 ~~~~~~~~~v~~c~ye~~t~wg~~~G~~~--~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~RWa 492 (745)
+.+||+. ..+.||++.++++..+||++.|+++ +.++...|.+++++++||.||+
T Consensus 138 ----------------------~~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~ 193 (196)
T cd02520 138 ----------------------AIGGFEAFADYLAEDYFLGKLIWRLGYRVVLSPY--VVMQPLGSTSLASFWRRQLRWS 193 (196)
T ss_pred ----------------------hccChHHHhHHHHHHHHHHHHHHHcCCeEEEcch--heeccCCcccHHHHHHHHHHHh
Confidence 2346653 3568999999999999999999986 6888999999999999999998
Q ss_pred cc
Q 004562 493 SG 494 (745)
Q Consensus 493 ~G 494 (745)
+.
T Consensus 194 ~~ 195 (196)
T cd02520 194 RT 195 (196)
T ss_pred cc
Confidence 64
No 29
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.92 E-value=3.5e-24 Score=222.18 Aligned_cols=226 Identities=18% Similarity=0.180 Sum_probs=165.8
Q ss_pred CCCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhccccc
Q 004562 90 EDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKT 169 (745)
Q Consensus 90 ~~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~ 169 (745)
..+..|.|+|+||+ |||+ +.+.+++.++.+++||.++++|+|+|||++|.|.+.+.+-
T Consensus 24 ~~~~~~~isVvip~---~n~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~------------------ 81 (251)
T cd06439 24 DPAYLPTVTIIIPA---YNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREY------------------ 81 (251)
T ss_pred CCCCCCEEEEEEec---CCcH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHH------------------
Confidence 35668999999999 8998 6899999999999999988999999999999775432210
Q ss_pred CCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcc
Q 004562 170 ICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMP 249 (745)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P 249 (745)
.+ .
T Consensus 82 --------------------------------~~-------------------------------------------~-- 84 (251)
T cd06439 82 --------------------------------AD-------------------------------------------K-- 84 (251)
T ss_pred --------------------------------hh-------------------------------------------C--
Confidence 00 0
Q ss_pred eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCccccc
Q 004562 250 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHN 329 (745)
Q Consensus 250 ~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n 329 (745)
++.++..++ +.+|++|+|.+++. +++|+|+++|+|.+++ |+++++++..+.+++ ++.|++.....+
T Consensus 85 ~v~~i~~~~-----~~g~~~a~n~gi~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~ 150 (251)
T cd06439 85 GVKLLRFPE-----RRGKAAALNRALAL----ATGEIVVFTDANALLD-PDALRLLVRHFADPS----VGAVSGELVIVD 150 (251)
T ss_pred cEEEEEcCC-----CCChHHHHHHHHHH----cCCCEEEEEccccCcC-HHHHHHHHHHhcCCC----ccEEEeEEEecC
Confidence 134444433 46899999999999 7899999999999987 999999999997665 888887665544
Q ss_pred CCccChHHHHH-HHhhhhhHhhhhhcCC-ccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccc
Q 004562 330 FNEHDIYDGSL-RSGYRLQWPGMDGLKG-PFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKN 407 (745)
Q Consensus 330 ~~~~d~~~~~~-~~f~~~~~~g~d~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~ 407 (745)
.+. ....... ..+...........+. ....|++..+||+++.
T Consensus 151 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~----------------------------------- 194 (251)
T cd06439 151 GGG-SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFR----------------------------------- 194 (251)
T ss_pred Ccc-cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhc-----------------------------------
Confidence 321 1111111 1111111111111222 2233444457888771
Q ss_pred cCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhH
Q 004562 408 VNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQ 487 (745)
Q Consensus 408 ~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Q 487 (745)
|++.....||.++++++..+||++.|+++ +..+...|.+..++++|
T Consensus 195 --------------------------------~~~~~~~~eD~~l~~~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~ 240 (251)
T cd06439 195 --------------------------------PLPADTINDDFVLPLRIARQGYRVVYEPD--AVAYEEVAEDGSEEFRR 240 (251)
T ss_pred --------------------------------CCCcccchhHHHHHHHHHHcCCeEEeccc--cEEEEeCcccHHHHHHH
Confidence 44555667999999999999999999986 68899999999999999
Q ss_pred hHHhhcccccc
Q 004562 488 GTRWASGLIDV 498 (745)
Q Consensus 488 r~RWa~G~~qi 498 (745)
+.||+.|++|.
T Consensus 241 ~~r~~~g~~~~ 251 (251)
T cd06439 241 RVRIAAGNLQA 251 (251)
T ss_pred HHHHHhccccC
Confidence 99999999983
No 30
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.92 E-value=3.4e-24 Score=217.61 Aligned_cols=221 Identities=21% Similarity=0.215 Sum_probs=163.6
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004562 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (745)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~~ 178 (745)
|+||| |||+ +.+.+||.|++.++||.++++|+|+|||++|.|.+.+.+...
T Consensus 1 viip~---~n~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~------------------------- 51 (229)
T cd04192 1 VVIAA---RNEA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAA------------------------- 51 (229)
T ss_pred CEEEe---cCcH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHh-------------------------
Confidence 68999 9998 689999999999999999999999999999977543320000
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccC
Q 004562 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (745)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~k 258 (745)
...+++.++.++.
T Consensus 52 -------------------------------------------------------------------~~~~~v~~~~~~~ 64 (229)
T cd04192 52 -------------------------------------------------------------------KPNFQLKILNNSR 64 (229)
T ss_pred -------------------------------------------------------------------CCCcceEEeeccC
Confidence 0012455554432
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHHH
Q 004562 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDG 338 (745)
Q Consensus 259 rp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~ 338 (745)
+ ...+|+.++|.+++. +++|+|+++|+|.++. |++|++++..|.++. .+.|++++.+... +.+..
T Consensus 65 -~--~~~g~~~a~n~g~~~----~~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~~---~~~~~ 129 (229)
T cd04192 65 -V--SISGKKNALTTAIKA----AKGDWIVTTDADCVVP-SNWLLTFVAFIQKEQ----IGLVAGPVIYFKG---KSLLA 129 (229)
T ss_pred -c--ccchhHHHHHHHHHH----hcCCEEEEECCCcccC-HHHHHHHHHHhhcCC----CcEEeeeeeecCC---ccHHH
Confidence 1 257999999999999 8899999999999986 999999999887654 6778887766521 21111
Q ss_pred HH---HH-hhhhhHhhhhhcCCc-cccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCCccc
Q 004562 339 SL---RS-GYRLQWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENL 413 (745)
Q Consensus 339 ~~---~~-f~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~ 413 (745)
.. .. .......+..+.+.+ .++|++.++||+++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~----------------------------------------- 168 (229)
T cd04192 130 KFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFF----------------------------------------- 168 (229)
T ss_pred HHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHH-----------------------------------------
Confidence 11 11 111122223334444 456888899999982
Q ss_pred hhhHHHhhhhhccccccccccccccccccC--CCccchHHHHHHHHHCCC-eEEEeCCCCCeeEeccCCChHHHHhHhHH
Q 004562 414 SNVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGW-TSTYLDPSRPQFLGTSTTNLNDVLIQGTR 490 (745)
Q Consensus 414 ~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~--~svtED~~t~~rl~~~Gw-rsvy~~~~~~~~~g~aP~~l~~~l~Qr~R 490 (745)
+.+||++ ...+||.+..++++++|| ++.|++......+...|++++++++||+|
T Consensus 169 -----------------------~~ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~R 225 (229)
T cd04192 169 -----------------------EVGGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKR 225 (229)
T ss_pred -----------------------HhcCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHH
Confidence 2467874 467899999999999999 99998654577889999999999999999
Q ss_pred hhcc
Q 004562 491 WASG 494 (745)
Q Consensus 491 Wa~G 494 (745)
|++|
T Consensus 226 w~~g 229 (229)
T cd04192 226 WASK 229 (229)
T ss_pred hhcC
Confidence 9988
No 31
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.92 E-value=4.9e-24 Score=218.44 Aligned_cols=229 Identities=18% Similarity=0.137 Sum_probs=161.9
Q ss_pred ceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccc
Q 004562 96 AIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAY 175 (745)
Q Consensus 96 ~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~y 175 (745)
+|+|+||| |||+++.+.+|+.++.+++ | .+|+|+|||++|.|.+.+.+..
T Consensus 1 ~isVvIp~---~ne~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~~----------------------- 50 (235)
T cd06434 1 DVTVIIPV---YDEDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQTV----------------------- 50 (235)
T ss_pred CeEEEEee---cCCChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhhc-----------------------
Confidence 48999999 9999779999999999999 4 6899999999986644331100
Q ss_pred ccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEe
Q 004562 176 FSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVS 255 (745)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~ 255 (745)
..+.+.++
T Consensus 51 -----------------------------------------------------------------------~~~~~~v~- 58 (235)
T cd06434 51 -----------------------------------------------------------------------KYGGIFVI- 58 (235)
T ss_pred -----------------------------------------------------------------------cCCcEEEE-
Confidence 00123333
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccCh
Q 004562 256 REKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDI 335 (745)
Q Consensus 256 R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~ 335 (745)
+++ +++|++|+|.+++. ++||+|+++|+|..+. |++|++++..|.|++ ++.|++.+...+.+ ...
T Consensus 59 ~~~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~----v~~v~~~~~~~~~~-~~~ 123 (235)
T cd06434 59 TVP-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVWP-PNALPEMLKPFEDPK----VGGVGTNQRILRPR-DSK 123 (235)
T ss_pred ecC-----CCChHHHHHHHHHH----hCCCEEEEECCCceeC-hhHHHHHHHhccCCC----EeEEcCceEeecCc-ccH
Confidence 222 57899999999999 8999999999999987 999999999998766 99999888776542 122
Q ss_pred HHHHHHHhhhh----hHhhhhhcCCc-cccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCC
Q 004562 336 YDGSLRSGYRL----QWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNG 410 (745)
Q Consensus 336 ~~~~~~~f~~~----~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~ 410 (745)
+......++.. ........++. ...|...++||+++...... .+|.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~---------------~~~~-------------- 174 (235)
T cd06434 124 WSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFL---------------EEFT-------------- 174 (235)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhH---------------HHhh--------------
Confidence 22111111111 11222233332 23577778999999421000 0000
Q ss_pred ccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHH
Q 004562 411 ENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTR 490 (745)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~R 490 (745)
.+.++.......||.+++.+++++||+..|++. +.++...|+++.++++||.|
T Consensus 175 -------------------------~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~q~~R 227 (235)
T cd06434 175 -------------------------NETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYT--SEAYTETPENYKKFLKQQLR 227 (235)
T ss_pred -------------------------hhhhcCCCCCcCchHHHHHHHHHCCCeEEEecC--CeEEEEcchhHHHHHHHhhh
Confidence 001221224678999999999999999999986 67788899999999999999
Q ss_pred hhccccc
Q 004562 491 WASGLID 497 (745)
Q Consensus 491 Wa~G~~q 497 (745)
|++|..+
T Consensus 228 w~~~~~~ 234 (235)
T cd06434 228 WSRSNWR 234 (235)
T ss_pred hhhcccC
Confidence 9999864
No 32
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.92 E-value=2.4e-22 Score=234.61 Aligned_cols=236 Identities=17% Similarity=0.196 Sum_probs=167.8
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCceEEEE---EcCCCCccchHhHHHHHHhhhhhhhhhhhcc
Q 004562 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAM-ALDYPVDKLHVYL---SDDGGSPITLRGMREAFRFAKWWIPFCRRYR 166 (745)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~-~~dYP~~kl~Vyv---~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~ 166 (745)
+.+.|.|+|+||+ |||+ +++.+||.+++ ++|||+ ++|+| .|||.+ .+++.+.+
T Consensus 67 ~~~~~~vsIlVPa---~nE~-~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~T---~~~~~~~~-------------- 123 (703)
T PRK15489 67 ERDEQPLAIMVPA---WKEY-DVIAKMIENMLATLDYRR--YVIFVGTYPNDAET---ITEVERMR-------------- 123 (703)
T ss_pred ccCCCceEEEEeC---CCcH-HHHHHHHHHHHhcCCCCC--eEEEEEecCCCccH---HHHHHHHh--------------
Confidence 4567999999999 9999 69999999986 899995 78999 577744 33222111
Q ss_pred cccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhcccc
Q 004562 167 IKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLV 246 (745)
Q Consensus 167 v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~ 246 (745)
.
T Consensus 124 -------------------------------------------------------------------------------~ 124 (703)
T PRK15489 124 -------------------------------------------------------------------------------R 124 (703)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred CcceEEEEeccCCCCCCCCChHHHHHHHHHhc---CCCCCCCE--EEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEE
Q 004562 247 EMPLLVYVSREKSPEHLHHFKGGALNVLLRVS---GVISNSPY--ILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFV 321 (745)
Q Consensus 247 ~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s---~~~s~g~~--Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V 321 (745)
.+|+++-|..+. + ...+||.|||.++... .....++| |++.|||.++. |+.|+. +.++.+.. .+|
T Consensus 125 ~~p~~~~v~~~~-~--gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~-P~~L~~-~~~~~~~~-----~~i 194 (703)
T PRK15489 125 RYKRLVRVEVPH-D--GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLH-PLELKY-FNYLLPRK-----DLV 194 (703)
T ss_pred cCCcEEEEEcCC-C--CCCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCC-hhHHHH-HHhhcCCc-----cee
Confidence 123444444322 2 2478999999999863 11123444 99999999975 999965 46665322 368
Q ss_pred cCCcc-cccCCc---cChHHHHHHHhhhhhHhhhhhcCCccc-cccccchhhhhccCCccccccchHhhhhhhCCchhHH
Q 004562 322 QFPQK-FHNFNE---HDIYDGSLRSGYRLQWPGMDGLKGPFL-TGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFI 396 (745)
Q Consensus 322 Q~Pq~-f~n~~~---~d~~~~~~~~f~~~~~~g~d~~~~~~~-~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v 396 (745)
|.|-. ..|... +..|..+....++..++++...++++. .|+|+.|||++|. +
T Consensus 195 Q~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~-----------~------------ 251 (703)
T PRK15489 195 QLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALL-----------A------------ 251 (703)
T ss_pred eeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHH-----------H------------
Confidence 98742 222111 123455666667778889999998875 6899999999982 0
Q ss_pred hhhhhhccccccCCccchhhHHHhhhhhccccccccccccccc---cccCCCccchHHHHHHHHHCCCeEEEeCC-----
Q 004562 397 KSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV---GFSYQSVSEDFFTGFILHCKGWTSTYLDP----- 468 (745)
Q Consensus 397 ~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~---G~~~~svtED~~t~~rl~~~Gwrsvy~~~----- 468 (745)
++ +++ +|+.+|+|||+++|+||+++|||+.|+--
T Consensus 252 --------------------l~------------------~~gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~ 293 (703)
T PRK15489 252 --------------------LM------------------KERGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFR 293 (703)
T ss_pred --------------------HH------------------HhcCCCCCCCCCchHhHHHHHHHHHCCCceEEEEEecccc
Confidence 00 123 58889999999999999999999999221
Q ss_pred ----------------CCCeeEeccCCChHHHHhHhHHhhcccc-ccc
Q 004562 469 ----------------SRPQFLGTSTTNLNDVLIQGTRWASGLI-DVS 499 (745)
Q Consensus 469 ----------------~~~~~~g~aP~~l~~~l~Qr~RWa~G~~-qi~ 499 (745)
...+.++..|.++++.++||.||-.|-. |-.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 294 VRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred ccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 1256778999999999999999999987 653
No 33
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.91 E-value=8.4e-22 Score=219.10 Aligned_cols=230 Identities=20% Similarity=0.111 Sum_probs=157.2
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004562 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI 170 (745)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r 170 (745)
++..|+|+|+||+ |||+ +.+.+|+.|++++|||. +++|+|+|||++|.|.+.+.+..+
T Consensus 36 ~~~~p~VSVIIpa---~Ne~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~----------------- 93 (384)
T TIGR03469 36 PEAWPAVVAVVPA---RNEA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAAR----------------- 93 (384)
T ss_pred CCCCCCEEEEEec---CCcH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHH-----------------
Confidence 4678999999999 9998 68999999999999995 489999999999988654332210
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcce
Q 004562 171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL 250 (745)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~ 250 (745)
. +| .-++
T Consensus 94 -----------------------------~----------------------~~----------------------~~~~ 100 (384)
T TIGR03469 94 -----------------------------A----------------------YG----------------------RGDR 100 (384)
T ss_pred -----------------------------h----------------------cC----------------------CCCc
Confidence 0 00 0013
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCC-----CCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCc
Q 004562 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISN-----SPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQ 325 (745)
Q Consensus 251 l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~-----g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq 325 (745)
+.++..+.+|. ...+|+.|+|.+++. +. +|+|+++|||..++ |+.+++++..+.+++ ++.|....
T Consensus 101 i~vi~~~~~~~-g~~Gk~~A~n~g~~~----A~~~~~~gd~llflDaD~~~~-p~~l~~lv~~~~~~~----~~~vs~~~ 170 (384)
T TIGR03469 101 LTVVSGQPLPP-GWSGKLWAVSQGIAA----ARTLAPPADYLLLTDADIAHG-PDNLARLVARARAEG----LDLVSLMV 170 (384)
T ss_pred EEEecCCCCCC-CCcchHHHHHHHHHH----HhccCCCCCEEEEECCCCCCC-hhHHHHHHHHHHhCC----CCEEEecc
Confidence 45554333221 246999999999998 55 99999999999986 999999999987654 45554433
Q ss_pred ccccCCccChHHHH----HHHhhhhh---Hhhhhhc-CCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHh
Q 004562 326 KFHNFNEHDIYDGS----LRSGYRLQ---WPGMDGL-KGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIK 397 (745)
Q Consensus 326 ~f~n~~~~d~~~~~----~~~f~~~~---~~g~d~~-~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~ 397 (745)
++.. .+.+... ...++... ....+.. ......|.+.++||+++.
T Consensus 171 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~------------------------- 222 (384)
T TIGR03469 171 RLRC---ESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALE------------------------- 222 (384)
T ss_pred cccC---CCHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHH-------------------------
Confidence 3321 1122111 11111110 0111111 112346888899999982
Q ss_pred hhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccC--CCccchHHHHHHHHHCCCeEEEeCCCCCeeEe
Q 004562 398 SLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLG 475 (745)
Q Consensus 398 s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~--~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g 475 (745)
+.+||+. ..+.||++++.++.++|+++.+.... .....
T Consensus 223 ---------------------------------------~vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~-~~~s~ 262 (384)
T TIGR03469 223 ---------------------------------------RIGGIAAIRGALIDDCTLAAAVKRSGGRIWLGLAA-RTRSL 262 (384)
T ss_pred ---------------------------------------HcCCHHHHhhCcccHHHHHHHHHHcCCcEEEEecC-ceEEE
Confidence 2456764 46889999999999999999998753 33334
Q ss_pred ccCCChHHHHhHhHHhhc
Q 004562 476 TSTTNLNDVLIQGTRWAS 493 (745)
Q Consensus 476 ~aP~~l~~~l~Qr~RWa~ 493 (745)
..-+++++.++|+.||+.
T Consensus 263 r~~~~~~~~~~~~~r~~~ 280 (384)
T TIGR03469 263 RPYDGLGEIWRMIARTAY 280 (384)
T ss_pred EecCCHHHHHHHHHHhHH
Confidence 455789999999999953
No 34
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=5.5e-19 Score=193.08 Aligned_cols=270 Identities=19% Similarity=0.210 Sum_probs=193.9
Q ss_pred CCceEEEEecCCCCCCchHHHH----HHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhccccc
Q 004562 94 LPAIDVFICTADPEKEPTFGVM----NTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKT 169 (745)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~----~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~ 169 (745)
+-+-.|++|+ |||++.-|- .|.+|+.+-. -.+.+.++|+.|..++.- ++.|. +.|..+||+.+-+
T Consensus 143 ~hrTAilmPi---ynEd~~rVfAgLrA~~eSla~Tg-~~~~FD~FVLSDs~dpdi--alAEq----~a~~~l~~e~~g~- 211 (736)
T COG2943 143 LHRTAILMPI---YNEDVNRVFAGLRATYESLAATG-HAEHFDFFVLSDSRDPDI--ALAEQ----KAWAELCRELGGE- 211 (736)
T ss_pred ccceeEEeec---cccCHHHHHHHHHHHHHHHHhhC-CcccceEEEEcCCCCchh--hhhHH----HHHHHHHHHhCCC-
Confidence 3457899999 999987654 4444544443 345799999999998742 23332 3344455543210
Q ss_pred CCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcc
Q 004562 170 ICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMP 249 (745)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P 249 (745)
-
T Consensus 212 -------------------------------------------------------------------------------~ 212 (736)
T COG2943 212 -------------------------------------------------------------------------------G 212 (736)
T ss_pred -------------------------------------------------------------------------------C
Confidence 1
Q ss_pred eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc-CCCCCCcEEEEcCCcccc
Q 004562 250 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFH 328 (745)
Q Consensus 250 ~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~ 328 (745)
++.|-.|.+ +-+.||||+..-.|..| +..++++++|||+++. +|.+-+++..|+ ||+ .|.+||--.-.
T Consensus 213 ~ifYRrRr~----n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvMt-gd~lvrLv~~ME~~P~----aGlIQt~P~~~ 281 (736)
T COG2943 213 NIFYRRRRR----NVKRKAGNIADFCRRWG--SAYSYMLVLDADSVMT-GDCLVRLVRLMEANPD----AGLIQTSPKAS 281 (736)
T ss_pred ceeeehHhh----hhcccccCHHHHHHHhC--cccceEEEeecccccC-chHHHHHHHHHhhCCC----Cceeecchhhc
Confidence 355644444 36789999999999998 8899999999999997 999999999886 555 99999855544
Q ss_pred cCCccChHHHHH----HHhhhhhHhhhhhcCCc--cccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhh
Q 004562 329 NFNEHDIYDGSL----RSGYRLQWPGMDGLKGP--FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQS 402 (745)
Q Consensus 329 n~~~~d~~~~~~----~~f~~~~~~g~d~~~~~--~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~ 402 (745)
|. +..|...+ +++=.+...|...|++. .|-|.|+++|-++...
T Consensus 282 gg--~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~----------------------------- 330 (736)
T COG2943 282 GG--DTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIE----------------------------- 330 (736)
T ss_pred Cc--chHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHH-----------------------------
Confidence 43 34555432 33434567788888874 5889999999999832
Q ss_pred ccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChH
Q 004562 403 YEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLN 482 (745)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~ 482 (745)
+|....-. ..+.|.+..++.|+..+-.|.+.||-+--.++ ..-++++.|+|+-
T Consensus 331 -----------------------hcgLp~Lp---G~~pFgG~ilSHDfvEAALmRRaGW~v~ia~d-L~GSyEE~PpnLl 383 (736)
T COG2943 331 -----------------------HCGLPPLP---GRGPFGGHILSHDFVEAALMRRAGWGVWIAYD-LDGSYEELPPNLL 383 (736)
T ss_pred -----------------------hcCCCCCC---CCCCCCccccchHHHHHHHHhhcCceEEEecc-CCCchhhCCchHH
Confidence 11111100 12346777899999999999999998654443 5789999999999
Q ss_pred HHHhHhHHhhcccccccccccCccccCCCCCChhHHHHHHHHhHhh
Q 004562 483 DVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFP 528 (745)
Q Consensus 483 ~~l~Qr~RWa~G~~qi~~~r~~pl~~~~~~l~~~qrl~Y~~~~~~~ 528 (745)
|++++.+|||+|++|.+. ++. .++|.+..|+.+......+
T Consensus 384 D~l~RDRRWC~GNLqh~r-----l~~-~~GlHwvsR~h~~tGVmsY 423 (736)
T COG2943 384 DELKRDRRWCHGNLQHFR-----LFL-VKGLHWVSRAHFLTGVMSY 423 (736)
T ss_pred HHHhhhhHhhhcchhhce-----eec-cCCccHHHHHHHHHHHHHH
Confidence 999999999999999763 332 4799999998877665555
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.85 E-value=2.4e-20 Score=191.80 Aligned_cols=225 Identities=15% Similarity=0.097 Sum_probs=159.7
Q ss_pred ceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccc
Q 004562 96 AIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAY 175 (745)
Q Consensus 96 ~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~y 175 (745)
.++|+||+ |||+ +.+.+++.++.+++||..+.+|+|+|||++|.|.+.+.+..
T Consensus 1 ~~sIiip~---~n~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~----------------------- 53 (249)
T cd02525 1 FVSIIIPV---RNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYA----------------------- 53 (249)
T ss_pred CEEEEEEc---CCch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHH-----------------------
Confidence 38999999 9998 58899999999999997789999999999996643222110
Q ss_pred ccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEe
Q 004562 176 FSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVS 255 (745)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~ 255 (745)
+ ..|.+.++.
T Consensus 54 -------------------------------------~---------------------------------~~~~v~~i~ 63 (249)
T cd02525 54 -------------------------------------A---------------------------------KDPRIRLID 63 (249)
T ss_pred -------------------------------------h---------------------------------cCCeEEEEe
Confidence 0 013456664
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccCh
Q 004562 256 REKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDI 335 (745)
Q Consensus 256 R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~ 335 (745)
.+ ++++++|+|.|++. +++|+++++|+|.++. |+++.+++..+.+++ ...|+++....+ .+.
T Consensus 64 ~~------~~~~~~a~N~g~~~----a~~d~v~~lD~D~~~~-~~~l~~~~~~~~~~~----~~~v~~~~~~~~---~~~ 125 (249)
T cd02525 64 NP------KRIQSAGLNIGIRN----SRGDIIIRVDAHAVYP-KDYILELVEALKRTG----ADNVGGPMETIG---ESK 125 (249)
T ss_pred CC------CCCchHHHHHHHHH----hCCCEEEEECCCccCC-HHHHHHHHHHHhcCC----CCEEecceecCC---CCh
Confidence 32 35789999999999 7899999999999986 999999998887665 455655433222 122
Q ss_pred HHHHHHHh----hhhhHhhhhhcC---CccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhcccccc
Q 004562 336 YDGSLRSG----YRLQWPGMDGLK---GPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNV 408 (745)
Q Consensus 336 ~~~~~~~f----~~~~~~g~d~~~---~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~ 408 (745)
+....... +........... .....|.+.++||+++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 169 (249)
T cd02525 126 FQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFE------------------------------------ 169 (249)
T ss_pred HHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHH------------------------------------
Confidence 22111111 111100111111 22345677778888772
Q ss_pred CCccchhhHHHhhhhhccccccccccccccccccCC-CccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhH
Q 004562 409 NGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQ 487 (745)
Q Consensus 409 ~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~-svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Q 487 (745)
+.+||+.. ...||.+.+++++++|+++.|++. +......|.+++++.+|
T Consensus 170 ----------------------------~~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~--~~~~~~~~~s~~~~~~~ 219 (249)
T cd02525 170 ----------------------------KVGGFDESLVRNEDAELNYRLRKAGYKIWLSPD--IRVYYYPRSTLKKLARQ 219 (249)
T ss_pred ----------------------------HhCCCCcccCccchhHHHHHHHHcCcEEEEcCC--eEEEEcCCCCHHHHHHH
Confidence 12345544 347999999999999999999986 67778889999999999
Q ss_pred hHHhhccccccccc
Q 004562 488 GTRWASGLIDVSIS 501 (745)
Q Consensus 488 r~RWa~G~~qi~~~ 501 (745)
+.||+.|..|....
T Consensus 220 ~~r~~~~~~~~~~~ 233 (249)
T cd02525 220 YFRYGKWRARTLRK 233 (249)
T ss_pred HHHHhhhhHHHHHh
Confidence 99999999998763
No 36
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.80 E-value=2.6e-19 Score=177.70 Aligned_cols=161 Identities=21% Similarity=0.164 Sum_probs=114.4
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004562 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (745)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~~ 178 (745)
|+||+ |||+ +.+.+|+.++++++||.++++|+|+|||++|.|.+.+++ ++
T Consensus 1 VvIp~---~ne~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~--------------~~------------ 50 (183)
T cd06438 1 ILIPA---HNEE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARA--------------AG------------ 50 (183)
T ss_pred CEEec---cchH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHH--------------cC------------
Confidence 68999 9999 699999999999999988899999999999977532110 00
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccC
Q 004562 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (745)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~k 258 (745)
..++.+.+
T Consensus 51 ------------------------------------------------------------------------~~~~~~~~ 58 (183)
T cd06438 51 ------------------------------------------------------------------------ATVLERHD 58 (183)
T ss_pred ------------------------------------------------------------------------CeEEEeCC
Confidence 01112222
Q ss_pred CCCCCCCChHHHHHHHHHhcC-CCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHH
Q 004562 259 SPEHLHHFKGGALNVLLRVSG-VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYD 337 (745)
Q Consensus 259 rp~~~~~~KAGaLN~~l~~s~-~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 337 (745)
. ++.+|++|+|.+++.+. .-+++|+++++|+|++++ |+++.+++..|.+. ...||+.....+.+. ..+.
T Consensus 59 ~---~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~-p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~-~~~~ 128 (183)
T cd06438 59 P---ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLVD-PNALEELNARFAAG-----ARVVQAYYNSKNPDD-SWIT 128 (183)
T ss_pred C---CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCC-hhHHHHHHHHHhhC-----CCeeEEEEeeeCCcc-CHHH
Confidence 1 25789999999998741 014699999999999987 99999999988642 246777665555322 2222
Q ss_pred H----HHHHhhhhhHhhhhhcCCc-cccccccchhhhhc
Q 004562 338 G----SLRSGYRLQWPGMDGLKGP-FLTGTGHYIRRESL 371 (745)
Q Consensus 338 ~----~~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL 371 (745)
. ....++.....++..+++. .+.|+|+++||+++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l 167 (183)
T cd06438 129 RLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVL 167 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHH
Confidence 1 1223334455567777765 46899999999999
No 37
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.80 E-value=7.7e-19 Score=176.15 Aligned_cols=164 Identities=18% Similarity=0.133 Sum_probs=121.0
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004562 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (745)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~~ 178 (745)
|+||+ |||+ +.+.+||.|+++++ | +++|+|+|||++|.|.+.+. .+
T Consensus 1 ViIp~---~Ne~-~~l~~~l~sl~~~~-~--~~eIivvdd~S~D~t~~~~~--~~------------------------- 46 (191)
T cd06436 1 VLVPC---LNEE-AVIQRTLASLLRNK-P--NFLVLVIDDASDDDTAGIVR--LA------------------------- 46 (191)
T ss_pred CEEec---cccH-HHHHHHHHHHHhCC-C--CeEEEEEECCCCcCHHHHHh--he-------------------------
Confidence 68999 9999 69999999999999 5 48999999999998754221 00
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccC
Q 004562 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (745)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~k 258 (745)
...+++.++.++.
T Consensus 47 -------------------------------------------------------------------~~~~~v~~i~~~~ 59 (191)
T cd06436 47 -------------------------------------------------------------------ITDSRVHLLRRHL 59 (191)
T ss_pred -------------------------------------------------------------------ecCCcEEEEeccC
Confidence 0012456665532
Q ss_pred CCCCCCCChHHHHHHHHHhcC-------CCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCC
Q 004562 259 SPEHLHHFKGGALNVLLRVSG-------VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFN 331 (745)
Q Consensus 259 rp~~~~~~KAGaLN~~l~~s~-------~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~ 331 (745)
.. .+.+|++|+|.+++.+. .-..+|+|+++|+|..++ |++|+++..+|.||+ ++.||++.++.|.+
T Consensus 60 ~~--~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~-~~~l~~~~~~~~~~~----v~~v~~~~~~~~~~ 132 (191)
T cd06436 60 PN--ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLD-PNALEAVAPYFSDPR----VAGTQSRVRMYNRH 132 (191)
T ss_pred Cc--CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcC-HhHHHHHHHhhcCCc----eEEEeeeEEEecCC
Confidence 11 24689999999999731 001358999999999986 999999888888876 99999999888754
Q ss_pred ccChHHH----HHHHhhhhhHhhhhhcCCccccccccchhhhhc
Q 004562 332 EHDIYDG----SLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 371 (745)
Q Consensus 332 ~~d~~~~----~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL 371 (745)
.+ .+.. +....+..++.++...+...++|+|+++||++|
T Consensus 133 ~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l 175 (191)
T cd06436 133 KN-LLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSAL 175 (191)
T ss_pred CC-HHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHH
Confidence 32 2221 223334566778877776667899999999999
No 38
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.74 E-value=1.2e-17 Score=166.94 Aligned_cols=137 Identities=30% Similarity=0.426 Sum_probs=109.9
Q ss_pred EEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHHHHHHHhhhh----hHhhhhhcCCc-ccc
Q 004562 286 YILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRL----QWPGMDGLKGP-FLT 360 (745)
Q Consensus 286 ~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~----~~~g~d~~~~~-~~~ 360 (745)
+|+++|||+.++ ||++++++.++.||+ +++||+|..+.|. ++...+.+...+.. .....+..+.+ ...
T Consensus 1 ~v~~~DaDt~~~-~d~l~~~~~~~~~~~----~~~vq~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRLP-PDFLERLVAALEDPK----VDAVQGPIIFRNR--GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCCC-hHHHHHHHHHHhCCC----ceEEEccEEecCC--CChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 589999999987 999999999998776 9999999998643 33444433333321 12233344443 467
Q ss_pred ccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCCccchhhHHHhhhhhcccccccccccccccc
Q 004562 361 GTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVG 440 (745)
Q Consensus 361 Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G 440 (745)
|+|.++||+++. +.+|
T Consensus 74 G~~~~~r~~~l~----------------------------------------------------------------~vg~ 89 (193)
T PF13632_consen 74 GSGMLFRREALR----------------------------------------------------------------EVGG 89 (193)
T ss_pred CcceeeeHHHHH----------------------------------------------------------------HhCc
Confidence 999999999992 2357
Q ss_pred cc-CCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHHhhccc
Q 004562 441 FS-YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGL 495 (745)
Q Consensus 441 ~~-~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~ 495 (745)
|+ ..+++||+++++++.++|||+.|+++ +.+++.+|+|+.++++||+||..|.
T Consensus 90 ~~~~~~~~ED~~l~~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 90 FDDPFSIGEDMDLGFRLRRAGYRIVYVPD--AIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred ccccccccchHHHHHHHHHCCCEEEEecc--cceeeeCCCCHHHHHHHHHHHHhhh
Confidence 99 88999999999999999999999996 5789999999999999999999998
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.74 E-value=4.2e-17 Score=162.97 Aligned_cols=193 Identities=16% Similarity=0.157 Sum_probs=133.6
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccc
Q 004562 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQA 174 (745)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~ 174 (745)
|.|+|+||+ |||+.+.+.+|+.|+++++||. .+|+|+|||++|.|.+.+.+.
T Consensus 1 p~vsiii~~---~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~----------------------- 52 (202)
T cd04184 1 PLISIVMPV---YNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKK----------------------- 52 (202)
T ss_pred CeEEEEEec---ccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHH-----------------------
Confidence 689999999 9998568999999999999986 799999999998654322211
Q ss_pred cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEE
Q 004562 175 YFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYV 254 (745)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv 254 (745)
|.+ ..+.+.++
T Consensus 53 --------------------------~~~-------------------------------------------~~~~~~~~ 63 (202)
T cd04184 53 --------------------------YAA-------------------------------------------QDPRIKVV 63 (202)
T ss_pred --------------------------HHh-------------------------------------------cCCCEEEE
Confidence 100 01234555
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhh-cCCCCCCcEEEEcCCcccccCCcc
Q 004562 255 SREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEH 333 (745)
Q Consensus 255 ~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~ 333 (745)
..++ +.+++.|+|.+++. +++|||+++|+|.++. |+++.+++..| .+++ ++.|.+.......+.
T Consensus 64 ~~~~-----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~- 128 (202)
T cd04184 64 FREE-----NGGISAATNSALEL----ATGEFVALLDHDDELA-PHALYEVVKALNEHPD----ADLIYSDEDKIDEGG- 128 (202)
T ss_pred Eccc-----CCCHHHHHHHHHHh----hcCCEEEEECCCCcCC-hHHHHHHHHHHHhCCC----CCEEEccHHhccCCC-
Confidence 4433 57899999999999 8899999999999986 99999999988 5665 667766544332111
Q ss_pred ChHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCCccc
Q 004562 334 DIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENL 413 (745)
Q Consensus 334 d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~ 413 (745)
..... .+..... .+......+.|.++++||+++.
T Consensus 129 ~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~r~~~~----------------------------------------- 162 (202)
T cd04184 129 KRSEP----FFKPDWS-PDLLLSQNYIGHLLVYRRSLVR----------------------------------------- 162 (202)
T ss_pred CEecc----ccCCCCC-HHHhhhcCCccceEeEEHHHHH-----------------------------------------
Confidence 00000 0000000 0111122345677789999882
Q ss_pred hhhHHHhhhhhccccccccccccccccccCC-CccchHHHHHHHHHCCCeEEEeCC
Q 004562 414 SNVLQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDP 468 (745)
Q Consensus 414 ~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~-svtED~~t~~rl~~~Gwrsvy~~~ 468 (745)
+.+||+.+ ...||.+.++|++.+||+.+|+++
T Consensus 163 -----------------------~iggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~ 195 (202)
T cd04184 163 -----------------------QVGGFREGFEGAQDYDLVLRVSEHTDRIAHIPR 195 (202)
T ss_pred -----------------------HhCCCCcCcccchhHHHHHHHHhccceEEEccH
Confidence 23567655 357999999999999999999986
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.71 E-value=2.4e-16 Score=157.63 Aligned_cols=188 Identities=16% Similarity=0.148 Sum_probs=131.0
Q ss_pred EEEEecCCCCCCc-hHHHHHHHHHHHcCCCCCCceEEEEEcCCCCc-cchHhHHHHHHhhhhhhhhhhhcccccCCcccc
Q 004562 98 DVFICTADPEKEP-TFGVMNTVLSAMALDYPVDKLHVYLSDDGGSP-ITLRGMREAFRFAKWWIPFCRRYRIKTICPQAY 175 (745)
Q Consensus 98 dV~I~t~~pynEp-~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~-~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~y 175 (745)
+|+||| |||+ ++.+++|+.|+++++||. .+|+|+|||+++ .|.+.+.
T Consensus 1 sviip~---~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~-------------------------- 49 (201)
T cd04195 1 SVLMSV---YIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLE-------------------------- 49 (201)
T ss_pred CEEEEc---cccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHH--------------------------
Confidence 589999 8876 468999999999999995 689999999954 3321111
Q ss_pred ccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEe
Q 004562 176 FSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVS 255 (745)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~ 255 (745)
.|.+ ..| +.++.
T Consensus 50 ------------------------~~~~-------------------------------------------~~~-i~~i~ 61 (201)
T cd04195 50 ------------------------EFKR-------------------------------------------KLP-LKVVP 61 (201)
T ss_pred ------------------------HHHh-------------------------------------------cCC-eEEEE
Confidence 1100 012 56666
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc-CCCCCCcEEEEcCCcccccCCccC
Q 004562 256 REKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHD 334 (745)
Q Consensus 256 R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~d 334 (745)
.++ +.|+++|+|.|++. ++||+|+++|+|.+++ |+++.+++..|. +|+ ++.|.+.....+.+...
T Consensus 62 ~~~-----n~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~~-~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 127 (201)
T cd04195 62 LEK-----NRGLGKALNEGLKH----CTYDWVARMDTDDISL-PDRFEKQLDFIEKNPE----IDIVGGGVLEFDSDGND 127 (201)
T ss_pred cCc-----cccHHHHHHHHHHh----cCCCEEEEeCCccccC-cHHHHHHHHHHHhCCC----eEEEcccEEEECCCCCe
Confidence 554 36899999999999 8899999999999987 999999999885 444 78887766544332211
Q ss_pred hHHHH----HHHhhhhhHhhhhhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCC
Q 004562 335 IYDGS----LRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNG 410 (745)
Q Consensus 335 ~~~~~----~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~ 410 (745)
..... ....+.. ......++|.+.++||+++.
T Consensus 128 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~rr~~~~-------------------------------------- 163 (201)
T cd04195 128 IGKRRLPTSHDDILKF------ARRRSPFNHPTVMFRKSKVL-------------------------------------- 163 (201)
T ss_pred eccccCCCCHHHHHHH------hccCCCCCChHHhhhHHHHH--------------------------------------
Confidence 11000 0001110 01122345667789999872
Q ss_pred ccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCC
Q 004562 411 ENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDP 468 (745)
Q Consensus 411 ~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~ 468 (745)
+.+||+.....||.++..++..+|+++.|+++
T Consensus 164 --------------------------~~g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~ 195 (201)
T cd04195 164 --------------------------AVGGYQDLPLVEDYALWARMLANGARFANLPE 195 (201)
T ss_pred --------------------------HcCCcCCCCCchHHHHHHHHHHcCCceecccH
Confidence 23567777889999999999999999999975
No 41
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.67 E-value=1.2e-15 Score=150.86 Aligned_cols=186 Identities=17% Similarity=0.107 Sum_probs=128.9
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004562 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (745)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~ 177 (745)
+|+||| |||+ +.+++++.|+.+++||. ++|+|+|||++|.|.+.+.+.
T Consensus 1 sivi~~---~n~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~~-------------------------- 48 (202)
T cd06433 1 SIITPT---YNQA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKKY-------------------------- 48 (202)
T ss_pred CEEEec---cchH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHHh--------------------------
Confidence 489999 9998 69999999999999987 899999999999765422210
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEecc
Q 004562 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (745)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~ 257 (745)
.+ ...++..+
T Consensus 49 ------------------------~~----------------------------------------------~~~~~~~~ 58 (202)
T cd06433 49 ------------------------ED----------------------------------------------KITYWISE 58 (202)
T ss_pred ------------------------Hh----------------------------------------------hcEEEEec
Confidence 00 01233333
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhh-cCCCCCCcEEEEcCCcccccCCccChH
Q 004562 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIY 336 (745)
Q Consensus 258 krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (745)
+ ..++++|+|.|++. +++|+|+++|+|..+. |+.+.+.+..+ .+++ .++|.+...+.+.+.....
T Consensus 59 ~-----~~g~~~a~n~~~~~----a~~~~v~~ld~D~~~~-~~~~~~~~~~~~~~~~----~~~v~g~~~~~~~~~~~~~ 124 (202)
T cd06433 59 P-----DKGIYDAMNKGIAL----ATGDIIGFLNSDDTLL-PGALLAVVAAFAEHPE----VDVVYGDVLLVDENGRVIG 124 (202)
T ss_pred C-----CcCHHHHHHHHHHH----cCCCEEEEeCCCcccC-chHHHHHHHHHHhCCC----ccEEEeeeEEEcCCCCccc
Confidence 3 46899999999999 8999999999999987 89999988444 4554 6667665544433221111
Q ss_pred HHHHHHhhhhhHhhhhhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCCccchhh
Q 004562 337 DGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNV 416 (745)
Q Consensus 337 ~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~~~ 416 (745)
... ...............+|++.++||+++.
T Consensus 125 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------- 155 (202)
T cd06433 125 RRR-----PPPFLDKFLLYGMPICHQATFFRRSLFE-------------------------------------------- 155 (202)
T ss_pred CCC-----CcchhhhHHhhcCcccCcceEEEHHHHH--------------------------------------------
Confidence 000 0001112223344567788889999882
Q ss_pred HHHhhhhhccccccccccccccccccCC-CccchHHHHHHHHHCCCeEEEeCC
Q 004562 417 LQQETEVLASCSYEHQTKWGEEVGFSYQ-SVSEDFFTGFILHCKGWTSTYLDP 468 (745)
Q Consensus 417 ~~~~~~~v~~c~ye~~t~wg~~~G~~~~-svtED~~t~~rl~~~Gwrsvy~~~ 468 (745)
+.+||+.+ ..+||.+..+++.++|++.+++++
T Consensus 156 --------------------~~~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~ 188 (202)
T cd06433 156 --------------------KYGGFDESYRIAADYDLLLRLLLAGKIFKYLPE 188 (202)
T ss_pred --------------------HhCCCchhhCchhhHHHHHHHHHcCCceEecch
Confidence 12336544 567999999999999999998875
No 42
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.66 E-value=1.5e-15 Score=162.85 Aligned_cols=110 Identities=17% Similarity=0.054 Sum_probs=88.3
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004562 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (745)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~ 177 (745)
+|+||+ |||+++.+.+||.|+++..+|....+|+|+||||+|.|.+.+.+..
T Consensus 1 SIIIp~---~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~------------------------- 52 (299)
T cd02510 1 SVIIIF---HNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEY------------------------- 52 (299)
T ss_pred CEEEEE---ecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHH-------------------------
Confidence 589999 9998679999999999999987667999999999997764332200
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEecc
Q 004562 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (745)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~ 257 (745)
. ....|++.++..+
T Consensus 53 ------------------------~------------------------------------------~~~~~~v~vi~~~ 66 (299)
T cd02510 53 ------------------------Y------------------------------------------KKYLPKVKVLRLK 66 (299)
T ss_pred ------------------------H------------------------------------------hhcCCcEEEEEcC
Confidence 0 0012356777554
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcC
Q 004562 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (745)
Q Consensus 258 krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D 311 (745)
+ +.|++.|.|.|++. ++||+|+++|+|+.++ |++|.+++..+..
T Consensus 67 ~-----n~G~~~a~N~g~~~----A~gd~i~fLD~D~~~~-~~wL~~ll~~l~~ 110 (299)
T cd02510 67 K-----REGLIRARIAGARA----ATGDVLVFLDSHCEVN-VGWLEPLLARIAE 110 (299)
T ss_pred C-----CCCHHHHHHHHHHH----ccCCEEEEEeCCcccC-ccHHHHHHHHHHh
Confidence 4 47899999999999 8999999999999986 9999999998864
No 43
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.65 E-value=6.6e-15 Score=153.13 Aligned_cols=123 Identities=14% Similarity=0.110 Sum_probs=89.5
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004562 93 KLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (745)
Q Consensus 93 ~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p 172 (745)
..|.|+|+||+ |||+ +.+..++.++.....+...++|+|+||||+|.|.+.+.+..+
T Consensus 7 ~~~~vsVvIp~---yne~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~------------------- 63 (243)
T PLN02726 7 GAMKYSIIVPT---YNER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQK------------------- 63 (243)
T ss_pred CCceEEEEEcc---CCch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHH-------------------
Confidence 45899999999 9998 477888877765432223689999999999988654332110
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEE
Q 004562 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (745)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~ 252 (745)
.|. -+++.
T Consensus 64 ---------------------------~~~---------------------------------------------~~~v~ 71 (243)
T PLN02726 64 ---------------------------VYG---------------------------------------------EDRIL 71 (243)
T ss_pred ---------------------------hcC---------------------------------------------CCcEE
Confidence 000 01245
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCC
Q 004562 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFP 324 (745)
Q Consensus 253 Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~P 324 (745)
++.+++ +.+|++|+|.|++. ++||+|+++|+|...+ |+.+.+++..+.+++ .+.|.+.
T Consensus 72 ~~~~~~-----n~G~~~a~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~ 129 (243)
T PLN02726 72 LRPRPG-----KLGLGTAYIHGLKH----ASGDFVVIMDADLSHH-PKYLPSFIKKQRETG----ADIVTGT 129 (243)
T ss_pred EEecCC-----CCCHHHHHHHHHHH----cCCCEEEEEcCCCCCC-HHHHHHHHHHHHhcC----CcEEEEc
Confidence 554433 46899999999998 8999999999999975 999999999886544 5556554
No 44
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.64 E-value=4.4e-15 Score=149.13 Aligned_cols=161 Identities=18% Similarity=0.144 Sum_probs=107.6
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004562 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (745)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~ 177 (745)
+|+||| |||+ ..+.+++.|+++++|| +++|+|+|||++|.|.+.+.+.++ +
T Consensus 1 sIvIp~---yn~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~~~----------~------------- 51 (214)
T cd04196 1 AVLMAT---YNGE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEYID----------K------------- 51 (214)
T ss_pred CEEEEe---cCcH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHHHh----------c-------------
Confidence 589999 9999 6899999999999999 489999999999987654332110 0
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEecc
Q 004562 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (745)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~ 257 (745)
|| +.+.++..+
T Consensus 52 ---------------------------------------------~~------------------------~~~~~~~~~ 62 (214)
T cd04196 52 ---------------------------------------------DP------------------------FIIILIRNG 62 (214)
T ss_pred ---------------------------------------------CC------------------------ceEEEEeCC
Confidence 00 123444443
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhh-cCCCCCCcEEEEcCCcccccCCccChH
Q 004562 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIY 336 (745)
Q Consensus 258 krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (745)
+ .+++++|+|.+++. ++||+|+++|+|.+.. |+.+.+++..+ .++. .+++.+.....+.+.. ..
T Consensus 63 ~-----~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~~-~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~ 127 (214)
T cd04196 63 K-----NLGVARNFESLLQA----ADGDYVFFCDQDDIWL-PDKLERLLKAFLKDDK----PLLVYSDLELVDENGN-PI 127 (214)
T ss_pred C-----CccHHHHHHHHHHh----CCCCEEEEECCCcccC-hhHHHHHHHHHhcCCC----ceEEecCcEEECCCCC-Cc
Confidence 3 57999999999998 8999999999999886 99999999984 4444 6677776554332211 11
Q ss_pred HHHHHHhhhh--hHhhhhhcCCccccccccchhhhhc
Q 004562 337 DGSLRSGYRL--QWPGMDGLKGPFLTGTGHYIRRESL 371 (745)
Q Consensus 337 ~~~~~~f~~~--~~~g~d~~~~~~~~Gtg~~~RR~aL 371 (745)
.......... ............+.|+++++||+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 164 (214)
T cd04196 128 GESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELL 164 (214)
T ss_pred ccccccccccCCccCHHHHHHhCccCCceeeEEHHHH
Confidence 1000000000 0011111223455788899999988
No 45
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.60 E-value=1.7e-14 Score=146.28 Aligned_cols=178 Identities=19% Similarity=0.114 Sum_probs=120.2
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccc
Q 004562 97 IDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYF 176 (745)
Q Consensus 97 VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf 176 (745)
|+|+||+ |||+. .+.+++.|++++.|+. .+|+|+|||++|.|.+.+.+
T Consensus 1 vsvii~~---~n~~~-~l~~~l~sl~~q~~~~--~evivvdd~s~d~~~~~~~~-------------------------- 48 (221)
T cd02522 1 LSIIIPT---LNEAE-NLPRLLASLRRLNPLP--LEIIVVDGGSTDGTVAIARS-------------------------- 48 (221)
T ss_pred CEEEEEc---cCcHH-HHHHHHHHHHhccCCC--cEEEEEeCCCCccHHHHHhc--------------------------
Confidence 6899999 99985 8899999999999954 89999999999865432110
Q ss_pred cccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEec
Q 004562 177 SEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSR 256 (745)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R 256 (745)
+++.++.
T Consensus 49 ------------------------------------------------------------------------~~~~~~~- 55 (221)
T cd02522 49 ------------------------------------------------------------------------AGVVVIS- 55 (221)
T ss_pred ------------------------------------------------------------------------CCeEEEe-
Confidence 1234442
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChH
Q 004562 257 EKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIY 336 (745)
Q Consensus 257 ~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (745)
. ..+|++|+|.|++. +++|+|+++|+|..+. |+++.+++..+.++. ...+.....+.+. +..
T Consensus 56 -~-----~~g~~~a~n~g~~~----a~~~~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~~~~~~~~~~~---~~~ 117 (221)
T cd02522 56 -S-----PKGRARQMNAGAAA----ARGDWLLFLHADTRLP-PDWDAAIIETLRADG----AVAGAFRLRFDDP---GPR 117 (221)
T ss_pred -C-----CcCHHHHHHHHHHh----ccCCEEEEEcCCCCCC-hhHHHHHHHHhhcCC----cEEEEEEeeecCC---ccc
Confidence 2 24699999999998 7899999999999986 999999876665443 2223222223222 111
Q ss_pred HHHHHHhhhhhHhhhhhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCCccchhh
Q 004562 337 DGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNV 416 (745)
Q Consensus 337 ~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~~~ 416 (745)
... .......+....+..+.+.|.++||+++.
T Consensus 118 ~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-------------------------------------------- 149 (221)
T cd02522 118 LRL----LELGANLRSRLFGLPYGDQGLFIRRELFE-------------------------------------------- 149 (221)
T ss_pred hhh----hhhcccceecccCCCcCCceEEEEHHHHH--------------------------------------------
Confidence 110 00000011111222334556777888772
Q ss_pred HHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEE
Q 004562 417 LQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTY 465 (745)
Q Consensus 417 ~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy 465 (745)
+.+||++....||++..+++..+|++..+
T Consensus 150 --------------------~~G~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 150 --------------------ELGGFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred --------------------HhCCCCccccccHHHHHHHHHhCCCEEEc
Confidence 24578887889999999999999999876
No 46
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.60 E-value=2.3e-14 Score=140.74 Aligned_cols=104 Identities=17% Similarity=0.161 Sum_probs=79.3
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004562 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (745)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~~ 178 (745)
|+||+ |||+ +.+++||.|+.+++|+. .+|+|+|||++|.|.+.+.+..+
T Consensus 1 ivip~---~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~~~~~~~~~------------------------- 49 (182)
T cd06420 1 LIITT---YNRP-EALELVLKSVLNQSILP--FEVIIADDGSTEETKELIEEFKS------------------------- 49 (182)
T ss_pred CEEee---cCCh-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhHHHHHHHHHh-------------------------
Confidence 68999 9998 68999999999999886 78999999999976533221100
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccC
Q 004562 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (745)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~k 258 (745)
. ... .++++.+++
T Consensus 50 ---------------------~---------------------------------------------~~~-~~~~~~~~~ 62 (182)
T cd06420 50 ---------------------Q---------------------------------------------FPI-PIKHVWQED 62 (182)
T ss_pred ---------------------h---------------------------------------------cCC-ceEEEEcCC
Confidence 0 000 134443432
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhh
Q 004562 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (745)
Q Consensus 259 rp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (745)
+..+|++++|.+++. ++||+|+++|+|.+++ |+++.+++..+
T Consensus 63 ----~~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~~~~~~ 104 (182)
T cd06420 63 ----EGFRKAKIRNKAIAA----AKGDYLIFIDGDCIPH-PDFIADHIELA 104 (182)
T ss_pred ----cchhHHHHHHHHHHH----hcCCEEEEEcCCcccC-HHHHHHHHHHh
Confidence 134799999999999 8999999999999986 99999999877
No 47
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.60 E-value=4.9e-14 Score=143.13 Aligned_cols=114 Identities=18% Similarity=0.110 Sum_probs=86.5
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004562 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (745)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~~ 178 (745)
|+||+ |||+ ..+.+++.++.++.|+ ...+|+|+|||++|.|.+.+.+
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~---------------------------- 47 (224)
T cd06442 1 IIIPT---YNER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRE---------------------------- 47 (224)
T ss_pred CeEec---cchh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHH----------------------------
Confidence 68999 9998 5899999999999982 3489999999999977542221
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccC
Q 004562 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (745)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~k 258 (745)
|.+ ..|.+.++..++
T Consensus 48 ----------------------~~~-------------------------------------------~~~~i~~~~~~~ 62 (224)
T cd06442 48 ----------------------LAK-------------------------------------------EYPRVRLIVRPG 62 (224)
T ss_pred ----------------------HHH-------------------------------------------hCCceEEEecCC
Confidence 000 012234554444
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCC
Q 004562 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFP 324 (745)
Q Consensus 259 rp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~P 324 (745)
+.||++|+|.+++. +.||+|+++|+|..++ |+.+.+++..+.+++ .+.|.++
T Consensus 63 -----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~ 114 (224)
T cd06442 63 -----KRGLGSAYIEGFKA----ARGDVIVVMDADLSHP-PEYIPELLEAQLEGG----ADLVIGS 114 (224)
T ss_pred -----CCChHHHHHHHHHH----cCCCEEEEEECCCCCC-HHHHHHHHHHHhcCC----CCEEEEe
Confidence 57899999999999 8899999999999876 999999999876654 3445444
No 48
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.60 E-value=5.3e-14 Score=143.37 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=82.5
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004562 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (745)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~~ 178 (745)
|+||+ |||+ +.+.+|+.|+++++||. .++|+|+|||++|.|.+.+.+-. .+
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~~i~~~~~----------~~-------------- 51 (219)
T cd06913 1 IILPV---HNGE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKSAEIIEKWR----------KK-------------- 51 (219)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHHHHHHHHH----------Hh--------------
Confidence 68999 9998 69999999999999993 59999999999998764332210 00
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccC
Q 004562 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (745)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~k 258 (745)
+ ..+++.++..+.
T Consensus 52 ----------------------~---------------------------------------------~~~~~~~~~~~~ 64 (219)
T cd06913 52 ----------------------L---------------------------------------------EDSGVIVLVGSH 64 (219)
T ss_pred ----------------------C---------------------------------------------cccCeEEEEecc
Confidence 0 001234444332
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcC
Q 004562 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (745)
Q Consensus 259 rp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D 311 (745)
+.+ .+.+.+.|+|.|++. ++||+|+++|+|..++ |+.+.+.+..+.+
T Consensus 65 ~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D~~~~-~~~l~~~~~~~~~ 111 (219)
T cd06913 65 NSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSDDVMM-PQRIRLQYEAALQ 111 (219)
T ss_pred cCC-CCccHHHHHHHHHHh----cCCCEEEEECCCccCC-hhHHHHHHHHHHh
Confidence 211 246899999999999 8999999999999876 8999887776653
No 49
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.58 E-value=2.7e-14 Score=155.82 Aligned_cols=109 Identities=17% Similarity=0.178 Sum_probs=88.6
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcc
Q 004562 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQ 173 (745)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~ 173 (745)
.|.|+|+||+ ||++ +.+.+|+.|+++++|+. ++|+|+|||++|.|.+.+.+.++
T Consensus 5 ~p~vSVIIP~---yN~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~~i~~~~~~-------------------- 58 (328)
T PRK10073 5 TPKLSIIIPL---YNAG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSVEIAKHYAE-------------------- 58 (328)
T ss_pred CCeEEEEEec---cCCH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHHHHHHHHHh--------------------
Confidence 5899999999 9998 69999999999999986 89999999999987643322110
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEE
Q 004562 174 AYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVY 253 (745)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Y 253 (745)
..|++.+
T Consensus 59 -------------------------------------------------------------------------~~~~i~v 65 (328)
T PRK10073 59 -------------------------------------------------------------------------NYPHVRL 65 (328)
T ss_pred -------------------------------------------------------------------------hCCCEEE
Confidence 1134566
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCC
Q 004562 254 VSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (745)
Q Consensus 254 v~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~ 312 (745)
+.. + +.|.++|.|.|++. ++||||+++|+|..+. |+.+.+.+..+.++
T Consensus 66 i~~-~-----n~G~~~arN~gl~~----a~g~yi~flD~DD~~~-p~~l~~l~~~~~~~ 113 (328)
T PRK10073 66 LHQ-A-----NAGVSVARNTGLAV----ATGKYVAFPDADDVVY-PTMYETLMTMALED 113 (328)
T ss_pred EEC-C-----CCChHHHHHHHHHh----CCCCEEEEECCCCccC-hhHHHHHHHHHHhC
Confidence 643 2 47899999999999 8999999999999986 99999999877643
No 50
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.58 E-value=2.2e-14 Score=137.55 Aligned_cols=157 Identities=20% Similarity=0.218 Sum_probs=120.5
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004562 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (745)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~~ 178 (745)
|+||+ |||+ +.+.+|+.|+.+++||. .+|+|+|||+++.|.+.+.+..
T Consensus 1 vii~~---~~~~-~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~~~~~~~-------------------------- 48 (166)
T cd04186 1 IIIVN---YNSL-EYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVELLRELF-------------------------- 48 (166)
T ss_pred CEEEe---cCCH-HHHHHHHHHHHhccCCC--eEEEEEECCCCchHHHHHHHhC--------------------------
Confidence 58999 9996 79999999999999955 7899999999986543322100
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccC
Q 004562 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (745)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~k 258 (745)
+++.++..++
T Consensus 49 ----------------------------------------------------------------------~~~~~~~~~~ 58 (166)
T cd04186 49 ----------------------------------------------------------------------PEVRLIRNGE 58 (166)
T ss_pred ----------------------------------------------------------------------CCeEEEecCC
Confidence 0234444433
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHHH
Q 004562 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDG 338 (745)
Q Consensus 259 rp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~ 338 (745)
+.++++|+|.+++. +++++|+++|+|.+++ |+++.+.+..+.+. ++++.+++.
T Consensus 59 -----~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~---~~~~~~~~~-------------- 111 (166)
T cd04186 59 -----NLGFGAGNNQGIRE----AKGDYVLLLNPDTVVE-PGALLELLDAAEQD---PDVGIVGPK-------------- 111 (166)
T ss_pred -----CcChHHHhhHHHhh----CCCCEEEEECCCcEEC-ccHHHHHHHHHHhC---CCceEEEcc--------------
Confidence 47899999999999 7899999999999986 99999998866532 237777542
Q ss_pred HHHHhhhhhHhhhhhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCCccchhhHH
Q 004562 339 SLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQ 418 (745)
Q Consensus 339 ~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~~~~~ 418 (745)
++|++.++||+++.
T Consensus 112 --------------------~~~~~~~~~~~~~~---------------------------------------------- 125 (166)
T cd04186 112 --------------------VSGAFLLVRREVFE---------------------------------------------- 125 (166)
T ss_pred --------------------CceeeEeeeHHHHH----------------------------------------------
Confidence 67888899999882
Q ss_pred HhhhhhccccccccccccccccccCCC--ccchHHHHHHHHHCCCeEEEeCC
Q 004562 419 QETEVLASCSYEHQTKWGEEVGFSYQS--VSEDFFTGFILHCKGWTSTYLDP 468 (745)
Q Consensus 419 ~~~~~v~~c~ye~~t~wg~~~G~~~~s--vtED~~t~~rl~~~Gwrsvy~~~ 468 (745)
+.+||+... ..||.+.++++.++||++.++++
T Consensus 126 ------------------~~~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~ 159 (166)
T cd04186 126 ------------------EVGGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQ 159 (166)
T ss_pred ------------------HcCCCChhhhccccHHHHHHHHHHcCCeEEEccc
Confidence 123455432 45999999999999999999986
No 51
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.55 E-value=4.2e-14 Score=140.83 Aligned_cols=153 Identities=21% Similarity=0.234 Sum_probs=116.5
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHHHHHH-H
Q 004562 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLR-S 342 (745)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~-~ 342 (745)
-+.|.+||..+++. . +++|+|+++|+|+.++ |+.|++++..+.||+ +|.|.++....+. +.+....+ .
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~p~----vglVt~~~~~~~~---~~~~~~l~~~ 83 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRVP-PDYLRELVAPLADPG----VGLVTGLPRGVPA---RGFWSRLEAA 83 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeEC-HHHHHHHHHHHhCCC----CcEEEecccccCC---cCHHHHHHHH
Confidence 57899999999996 3 7899999999999987 999999999999987 9999876665443 23433332 2
Q ss_pred hhhhhHhhhh-hcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCCccchhhHHHhh
Q 004562 343 GYRLQWPGMD-GLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQET 421 (745)
Q Consensus 343 f~~~~~~g~d-~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~~~~~~~~ 421 (745)
++.....-.. ..+..+..|....+||++|.
T Consensus 84 ~~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~------------------------------------------------- 114 (175)
T PF13506_consen 84 FFNFLPGVLQALGGAPFAWGGSMAFRREALE------------------------------------------------- 114 (175)
T ss_pred HHhHHHHHHHHhcCCCceecceeeeEHHHHH-------------------------------------------------
Confidence 2221111111 22456778999999999992
Q ss_pred hhhccccccccccccccccccC--CCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccC----CChHHHHhHhHHhhc
Q 004562 422 EVLASCSYEHQTKWGEEVGFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST----TNLNDVLIQGTRWAS 493 (745)
Q Consensus 422 ~~v~~c~ye~~t~wg~~~G~~~--~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP----~~l~~~l~Qr~RWa~ 493 (745)
+.+||.. +.++||+.+|-+++++|||++..+. ++.....| .+++++++++.||++
T Consensus 115 ---------------~~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~--~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 115 ---------------EIGGFEALADYLADDYALGRRLRARGYRVVLSPY--PVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred ---------------HcccHHHHhhhhhHHHHHHHHHHHCCCeEEEcch--heeecccCccccccHHHHHHHHHhhcC
Confidence 2345553 6899999999999999999999884 45666666 489999999999985
No 52
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.53 E-value=1.9e-13 Score=137.01 Aligned_cols=113 Identities=13% Similarity=0.073 Sum_probs=85.9
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004562 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (745)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~~ 178 (745)
|+||| |||+ +.+.+++.|++++.||. .+|+|+|||++|.|.+.+.+..
T Consensus 1 viI~~---~n~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~~~-------------------------- 48 (202)
T cd04185 1 AVVVT---YNRL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTSLG-------------------------- 48 (202)
T ss_pred CEEEe---eCCH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHHhc--------------------------
Confidence 68999 9998 68999999999999996 5899999999997753222110
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccC
Q 004562 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (745)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~k 258 (745)
...| +.++..++
T Consensus 49 -------------------------------------------------------------------~~~~-i~~~~~~~ 60 (202)
T cd04185 49 -------------------------------------------------------------------DLDN-IVYLRLPE 60 (202)
T ss_pred -------------------------------------------------------------------CCCc-eEEEECcc
Confidence 0011 45555444
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEc
Q 004562 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQ 322 (745)
Q Consensus 259 rp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ 322 (745)
..+++.++|.+++.+- ..++|+++++|+|.+++ |+++++++..+.+++ ++.+.
T Consensus 61 -----n~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~~-~~~l~~l~~~~~~~~----~~~~~ 113 (202)
T cd04185 61 -----NLGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIPD-PDALEKLLAYADKDN----PQFLA 113 (202)
T ss_pred -----ccchhhHHHHHHHHHh-ccCCCEEEEeCCCCCcC-hHHHHHHHHHHhcCC----ceEec
Confidence 3678899999988642 25799999999999986 999999999887665 66663
No 53
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.53 E-value=6.6e-14 Score=133.46 Aligned_cols=160 Identities=28% Similarity=0.335 Sum_probs=104.8
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004562 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (745)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~~ 178 (745)
|+||+ |||+ +.+.+|+.|++++.|+. .+|+|+|||++|.|.+.+.+...
T Consensus 1 Viip~---~n~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~~~~~~~~------------------------- 49 (180)
T cd06423 1 IIVPA---YNEE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLEILEELAA------------------------- 49 (180)
T ss_pred Ceecc---cChH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHHHHHHHhc-------------------------
Confidence 67999 9999 79999999999999965 88999999999977543221100
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccC
Q 004562 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (745)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~k 258 (745)
...+.+.++..++
T Consensus 50 -------------------------------------------------------------------~~~~~~~~~~~~~ 62 (180)
T cd06423 50 -------------------------------------------------------------------LYIRRVLVVRDKE 62 (180)
T ss_pred -------------------------------------------------------------------cccceEEEEEecc
Confidence 0001234554443
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHh-hcCCCCCCcEEEEcCCcccccCCccChHH
Q 004562 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF-HLDPKTSSSLAFVQFPQKFHNFNEHDIYD 337 (745)
Q Consensus 259 rp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~-f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 337 (745)
+.+|+.|+|.+++. +++|+|+++|+|..+. |+++.+++.. +.+++ ++.|.......+... ..+.
T Consensus 63 -----~~g~~~~~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~-~~~~ 127 (180)
T cd06423 63 -----NGGKAGALNAGLRH----AKGDIVVVLDADTILE-PDALKRLVVPFFADPK----VGAVQGRVRVRNGSE-NLLT 127 (180)
T ss_pred -----cCCchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHhccCCC----eeeEeeeEEEecCcC-ccee
Confidence 57899999999999 7999999999999986 9999998544 44554 777765544333211 1111
Q ss_pred HHHHH-h---hhhhHhhhhhcCC-ccccccccchhhhhc
Q 004562 338 GSLRS-G---YRLQWPGMDGLKG-PFLTGTGHYIRRESL 371 (745)
Q Consensus 338 ~~~~~-f---~~~~~~g~d~~~~-~~~~Gtg~~~RR~aL 371 (745)
..... + ......+....+. ..+.|+++++||+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 166 (180)
T cd06423 128 RLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREAL 166 (180)
T ss_pred ccchheecceeeeeeehhheecceeecCchHHHHHHHHH
Confidence 11111 1 1111111111222 456788999999998
No 54
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.51 E-value=4.7e-13 Score=135.62 Aligned_cols=108 Identities=21% Similarity=0.149 Sum_probs=82.2
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCC--CCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccc
Q 004562 99 VFICTADPEKEPTFGVMNTVLSAMALDY--PVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYF 176 (745)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dY--P~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf 176 (745)
|+||+ |||+ ..+.+++.++.++.+ +....+|+|+|||++|.|.+.+.+..+
T Consensus 1 iiip~---yN~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~~----------------------- 53 (211)
T cd04188 1 VVIPA---YNEE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLAR----------------------- 53 (211)
T ss_pred CEEcc---cChH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHHH-----------------------
Confidence 68999 9998 689999999998865 444589999999999987643322100
Q ss_pred cccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcce-EEEEe
Q 004562 177 SEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL-LVYVS 255 (745)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~-l~Yv~ 255 (745)
..|. ++++.
T Consensus 54 ----------------------------------------------------------------------~~~~~i~~i~ 63 (211)
T cd04188 54 ----------------------------------------------------------------------KNPALIRVLT 63 (211)
T ss_pred ----------------------------------------------------------------------hCCCcEEEEE
Confidence 0011 24554
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCC
Q 004562 256 REKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (745)
Q Consensus 256 R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~ 313 (745)
.++ ..||++|+|.|++. ++||+|+++|+|...+ |+.+.+++..+.++.
T Consensus 64 ~~~-----n~G~~~a~~~g~~~----a~gd~i~~ld~D~~~~-~~~l~~l~~~~~~~~ 111 (211)
T cd04188 64 LPK-----NRGKGGAVRAGMLA----ARGDYILFADADLATP-FEELEKLEEALKTSG 111 (211)
T ss_pred ccc-----CCCcHHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhccC
Confidence 433 36899999999999 8899999999999976 999999999865543
No 55
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.50 E-value=6.4e-12 Score=143.09 Aligned_cols=167 Identities=17% Similarity=0.213 Sum_probs=104.3
Q ss_pred CCCEEEEeCCCCCCCccHHHHHHHHhhc-CCCCCCcEEEEcCCcccccCCccChHH--HHHHHhh-hhhHhhhhhcCCcc
Q 004562 283 NSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHDIYD--GSLRSGY-RLQWPGMDGLKGPF 358 (745)
Q Consensus 283 ~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~d~~~--~~~~~f~-~~~~~g~d~~~~~~ 358 (745)
..|||+.+|||+.+. |+++.+++.-+. ||+ ++-|.+.-+..|...+ ... +..+.+. ...+++.+..-|..
T Consensus 201 ~~~~il~~DaDt~~~-p~~~~~lv~~m~~d~~----i~gvCG~t~i~n~~~s-~~t~~Q~fEY~ish~l~Ka~Es~fG~V 274 (527)
T PF03142_consen 201 FYEYILMVDADTKFD-PDSVNRLVDAMERDPK----IGGVCGETRIDNKGQS-WWTMYQVFEYAISHHLQKAFESVFGSV 274 (527)
T ss_pred ceEEEEEecCCceEc-HHHHHHHHHHHcCCCC----eEEEeceeEEcCCCCC-HhhheeccchhHHHHHHHHHHHHhCce
Confidence 459999999999986 999999998775 665 7778775555554222 111 1112111 23445555544444
Q ss_pred cc--ccccchhhhhccCC-ccccc--cchHhhhhhhCCchhHHhhhhhhccccccCCccchhhHHHhhhhhccccccccc
Q 004562 359 LT--GTGHYIRRESLYGN-FKHKG--IDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQT 433 (745)
Q Consensus 359 ~~--Gtg~~~RR~aL~~~-~~~~~--~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t 433 (745)
.| |.-+++|-+|+..+ ..... .+ .++-++|.. .. .
T Consensus 275 tCLPGcfsmyR~~a~~~~~~~~~p~l~~-~~i~~~Y~~--------------~~-------------------------~ 314 (527)
T PF03142_consen 275 TCLPGCFSMYRISALMDGDGYWVPLLIS-PDIIEKYSE--------------NP-------------------------V 314 (527)
T ss_pred eecCCcceeeeeehhccccccccccccc-hHHHHHHhh--------------cc-------------------------c
Confidence 44 65567999998641 10000 00 011111100 00 0
Q ss_pred ccccccc-ccCCCccchHHHHHHHHHC--CCeEEEeCCCCCeeEeccCCChHHHHhHhHHhhcccccccc
Q 004562 434 KWGEEVG-FSYQSVSEDFFTGFILHCK--GWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSI 500 (745)
Q Consensus 434 ~wg~~~G-~~~~svtED~~t~~rl~~~--Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~ 500 (745)
+... ..-..+.||-.++..|.++ |||..|++. +.+++.+|++++.++.||+||..|++-.++
T Consensus 315 ---dtlh~~nl~~lGEDR~LttLlLk~~~~~k~~y~~~--A~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 315 ---DTLHQKNLLDLGEDRWLTTLLLKQFPGYKTEYVPS--AVAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred ---hHHHHHhhhhcchhHHHHHHHHhhCCCceEEEccc--ccccccCCccHHHHHHHhhhccchhHhhHh
Confidence 0000 0112568999888777776 899999996 789999999999999999999999986543
No 56
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.49 E-value=5.5e-13 Score=142.36 Aligned_cols=109 Identities=16% Similarity=0.253 Sum_probs=86.1
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004562 93 KLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (745)
Q Consensus 93 ~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p 172 (745)
..|.|+|+||| |||+ +.+.+||.|+++++||. ++|+|+|||+++ .+.+.+.+
T Consensus 3 ~~p~VSVIip~---yN~~-~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~--~~~~~~~~-------------------- 54 (279)
T PRK10018 3 DNPLISIYMPT---WNRQ-QLAIRAIKSVLRQDYSN--WEMIIVDDCSTS--WEQLQQYV-------------------- 54 (279)
T ss_pred CCCEEEEEEEe---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCC--HHHHHHHH--------------------
Confidence 35899999999 9999 47889999999999997 899999999984 22111110
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEE
Q 004562 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (745)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~ 252 (745)
+++ .-|++.
T Consensus 55 -----------------------------~~~------------------------------------------~~~ri~ 63 (279)
T PRK10018 55 -----------------------------TAL------------------------------------------NDPRIT 63 (279)
T ss_pred -----------------------------HHc------------------------------------------CCCCEE
Confidence 000 013577
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc
Q 004562 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (745)
Q Consensus 253 Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (745)
|+..++ +.|+++|+|.|++. ++||||+++|+|.... |+.|.+.+.++.
T Consensus 64 ~i~~~~-----n~G~~~a~N~gi~~----a~g~~I~~lDaDD~~~-p~~l~~~~~~~~ 111 (279)
T PRK10018 64 YIHNDI-----NSGACAVRNQAIML----AQGEYITGIDDDDEWT-PNRLSVFLAHKQ 111 (279)
T ss_pred EEECCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-ccHHHHHHHHHH
Confidence 876554 57899999999999 8999999999999987 999999888765
No 57
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.49 E-value=1.5e-13 Score=141.03 Aligned_cols=142 Identities=15% Similarity=0.098 Sum_probs=86.2
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHH---Hhh-cCCCCCCcEEEEcCCcc
Q 004562 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM---CFH-LDPKTSSSLAFVQFPQK 326 (745)
Q Consensus 251 l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v---~~f-~D~~~~~~vg~VQ~Pq~ 326 (745)
+.++..++ +.|+++|+|.|++.+.. .++|+|+++|+|..++ |++|.+++ ..+ .++ +++.+ +|+.
T Consensus 49 i~~i~~~~-----n~G~~~a~N~g~~~a~~-~~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~~~~----~~~~~-~~~~ 116 (237)
T cd02526 49 IELIHLGE-----NLGIAKALNIGIKAALE-NGADYVLLFDQDSVPP-PDMVEKLLAYKILSDKNS----NIGAV-GPRI 116 (237)
T ss_pred EEEEECCC-----ceehHHhhhHHHHHHHh-CCCCEEEEECCCCCcC-HhHHHHHHHHHHhhccCC----CeEEE-eeeE
Confidence 56665554 36799999999998210 1459999999999986 99999985 222 233 36655 4554
Q ss_pred cccCCccChHHHHHHH-hhh-hhHhhhhhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhcc
Q 004562 327 FHNFNEHDIYDGSLRS-GYR-LQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYE 404 (745)
Q Consensus 327 f~n~~~~d~~~~~~~~-f~~-~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~ 404 (745)
................ .+. ....+..........|+|+++||+++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~-------------------------------- 164 (237)
T cd02526 117 IDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALE-------------------------------- 164 (237)
T ss_pred EcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHH--------------------------------
Confidence 3322111111000000 000 000011111223456888899999882
Q ss_pred ccccCCccchhhHHHhhhhhccccccccccccccccccCCCc--cchHHHHHHHHHCCCeEEEeCC
Q 004562 405 HKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSV--SEDFFTGFILHCKGWTSTYLDP 468 (745)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sv--tED~~t~~rl~~~Gwrsvy~~~ 468 (745)
+.+||+.+.. .||++.++|+..+||+..|++.
T Consensus 165 --------------------------------~~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~ 198 (237)
T cd02526 165 --------------------------------KVGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPD 198 (237)
T ss_pred --------------------------------HhCCCCHHHcCccchHHHHHHHHHcCCcEEEEcC
Confidence 1345665432 5899999999999999999986
No 58
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.48 E-value=1.2e-12 Score=137.32 Aligned_cols=49 Identities=18% Similarity=0.083 Sum_probs=40.2
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCC-CCCCceEEEEEcCCCCccchHh
Q 004562 95 PAIDVFICTADPEKEPTFGVMNTVLSAMALD-YPVDKLHVYLSDDGGSPITLRG 147 (745)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~d-YP~~kl~Vyv~DDg~~~~T~~~ 147 (745)
|.|+|+||| |||+ +.+.+|+.|+.++. .+...++|+|+||||+|.|.+.
T Consensus 1 ~~vSVIi~~---yN~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i 50 (248)
T PRK10063 1 MLLSVITVA---FRNL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREF 50 (248)
T ss_pred CeEEEEEEe---CCCH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHH
Confidence 679999999 9998 68999999998642 2333599999999999988653
No 59
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.46 E-value=6.3e-14 Score=133.59 Aligned_cols=163 Identities=18% Similarity=0.087 Sum_probs=108.3
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004562 98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177 (745)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~ 177 (745)
+|+||| |||+ +.+.+|+.|++.+.++. .+|+|+|||++|.|.+.+.+..+
T Consensus 1 Svvip~---~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~~~~~~~~~~~------------------------ 50 (169)
T PF00535_consen 1 SVVIPT---YNEA-EYLERTLESLLKQTDPD--FEIIVVDDGSTDETEEILEEYAE------------------------ 50 (169)
T ss_dssp EEEEEE---SS-T-TTHHHHHHHHHHHSGCE--EEEEEEECS-SSSHHHHHHHHHC------------------------
T ss_pred CEEEEe---eCCH-HHHHHHHHHHhhccCCC--EEEEEeccccccccccccccccc------------------------
Confidence 699999 9996 69999999999995554 89999999999977543322110
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEecc
Q 004562 178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE 257 (745)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~ 257 (745)
..+++.|+.++
T Consensus 51 ---------------------------------------------------------------------~~~~i~~i~~~ 61 (169)
T PF00535_consen 51 ---------------------------------------------------------------------SDPNIRYIRNP 61 (169)
T ss_dssp ---------------------------------------------------------------------CSTTEEEEEHC
T ss_pred ---------------------------------------------------------------------ccccccccccc
Confidence 11257888887
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHH
Q 004562 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYD 337 (745)
Q Consensus 258 krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 337 (745)
++ .++++|+|.|++. +.++||+++|+|.++. |+++.+++..+.+.. .++..........+........
T Consensus 62 ~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~~-~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 129 (169)
T PF00535_consen 62 EN-----LGFSAARNRGIKH----AKGEYILFLDDDDIIS-PDWLEELVEALEKNP--PDVVIGSVIYIDDDNRYPDRRL 129 (169)
T ss_dssp CC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHHCT--TEEEEEEEEEEECTTETEECCC
T ss_pred cc-----ccccccccccccc----cceeEEEEeCCCceEc-HHHHHHHHHHHHhCC--CcEEEEEEEEecCCcccccccc
Confidence 63 5999999999999 8999999999999987 899999999998633 2233332222222111100000
Q ss_pred --HHHHHhhhhhHhhhhhcCCccccccccchhhhhc
Q 004562 338 --GSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 371 (745)
Q Consensus 338 --~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL 371 (745)
......+..............++|+++++||+++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~ 165 (169)
T PF00535_consen 130 RFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVF 165 (169)
T ss_dssp TSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHH
T ss_pred chhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHH
Confidence 0001222333444455667788999999999998
No 60
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.42 E-value=2.5e-11 Score=132.85 Aligned_cols=128 Identities=19% Similarity=0.166 Sum_probs=90.8
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcC------CCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhc
Q 004562 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMAL------DYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRY 165 (745)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~------dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~ 165 (745)
+..|.|+|+||+ |||+ ..+..++.++.+. ++|....+|+|+||||+|.|.+.+.+.++ ++
T Consensus 67 ~~~~~isVVIP~---yNe~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~----------~~ 132 (333)
T PTZ00260 67 DSDVDLSIVIPA---YNEE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWR----------QN 132 (333)
T ss_pred CCCeEEEEEEee---CCCH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHH----------hc
Confidence 457899999999 9999 4788999888753 24555689999999999988754332110 00
Q ss_pred ccccCCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccc
Q 004562 166 RIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADL 245 (745)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~ 245 (745)
.
T Consensus 133 ~------------------------------------------------------------------------------- 133 (333)
T PTZ00260 133 I------------------------------------------------------------------------------- 133 (333)
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cCcceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcC
Q 004562 246 VEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQF 323 (745)
Q Consensus 246 ~~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~ 323 (745)
..-+.+..+..++ +.||++|+|.|++. +.||+|+++|+|...+ |+.+.+++..+.+-+ .+.++.|.+
T Consensus 134 ~~~~~i~vi~~~~-----N~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~~-~~~l~~l~~~l~~~~-~~~~dvV~G 200 (333)
T PTZ00260 134 NPNIDIRLLSLLR-----NKGKGGAVRIGMLA----SRGKYILMVDADGATD-IDDFDKLEDIMLKIE-QNGLGIVFG 200 (333)
T ss_pred CCCCcEEEEEcCC-----CCChHHHHHHHHHH----ccCCEEEEEeCCCCCC-HHHHHHHHHHHHHhh-ccCCceEEe
Confidence 0001245554443 46899999999998 8899999999999875 999988888775310 112556654
No 61
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.40 E-value=1.9e-12 Score=127.30 Aligned_cols=120 Identities=17% Similarity=0.142 Sum_probs=90.9
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004562 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (745)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~~ 178 (745)
|+||+ |||+ +.+.+|+.++.++.|+....+|+|+|||++|.|.+.+.+..
T Consensus 1 iii~~---~n~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~-------------------------- 50 (185)
T cd04179 1 VVIPA---YNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELA-------------------------- 50 (185)
T ss_pred Ceecc---cChH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHH--------------------------
Confidence 57999 9998 68999999999999965678999999999997754332210
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccC
Q 004562 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (745)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~k 258 (745)
. ..|.+.++..++
T Consensus 51 ---------------------------~----------------------------------------~~~~~~~~~~~~ 63 (185)
T cd04179 51 ---------------------------A----------------------------------------RVPRVRVIRLSR 63 (185)
T ss_pred ---------------------------H----------------------------------------hCCCeEEEEccC
Confidence 0 012334554444
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCccccc
Q 004562 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHN 329 (745)
Q Consensus 259 rp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n 329 (745)
..+|++|+|.+++. +.||+|+++|+|..+. |++|.+.+..+.+++ .++|+++....+
T Consensus 64 -----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~~~~~~ 120 (185)
T cd04179 64 -----NFGKGAAVRAGFKA----ARGDIVVTMDADLQHP-PEDIPKLLEKLLEGG----ADVVIGSRFVRG 120 (185)
T ss_pred -----CCCccHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhccC----CcEEEEEeecCC
Confidence 35799999999999 8899999999999876 999999999865443 556666655443
No 62
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.29 E-value=2.7e-11 Score=128.73 Aligned_cols=145 Identities=15% Similarity=-0.027 Sum_probs=90.5
Q ss_pred ceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccc
Q 004562 249 PLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFH 328 (745)
Q Consensus 249 P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~ 328 (745)
|++.|+..++ +.|.|+|+|.|++.+-. .++|+|+++|.|.+++ |+.+.+++..+..+ +.+++.|+ |..+.
T Consensus 45 ~~i~~i~~~~-----N~G~a~a~N~Gi~~a~~-~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~--~~~~~~~~-~~~~~ 114 (281)
T TIGR01556 45 QKIALIHLGD-----NQGIAGAQNQGLDASFR-RGVQGVLLLDQDSRPG-NAFLAAQWKLLSAE--NGQACALG-PRFFD 114 (281)
T ss_pred CCeEEEECCC-----CcchHHHHHHHHHHHHH-CCCCEEEEECCCCCCC-HHHHHHHHHHHHhc--CCceEEEC-CeEEc
Confidence 3467776544 46899999999988310 2689999999999987 99999999887642 12488875 54333
Q ss_pred cCCccChHHH--HHHHhhhhhH-hhhhh-cCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhcc
Q 004562 329 NFNEHDIYDG--SLRSGYRLQW-PGMDG-LKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYE 404 (745)
Q Consensus 329 n~~~~d~~~~--~~~~f~~~~~-~g~d~-~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~ 404 (745)
.. .+..+.. .......... ..... .......++|+++||+++.
T Consensus 115 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~-------------------------------- 161 (281)
T TIGR01556 115 RG-TSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQ-------------------------------- 161 (281)
T ss_pred CC-CcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHH--------------------------------
Confidence 21 1111110 0000000000 00011 1223456788999999882
Q ss_pred ccccCCccchhhHHHhhhhhccccccccccccccccccCC--CccchHHHHHHHHHCCCeEEEeCC
Q 004562 405 HKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQ--SVSEDFFTGFILHCKGWTSTYLDP 468 (745)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~--svtED~~t~~rl~~~Gwrsvy~~~ 468 (745)
+.+||+++ .=.||.+..+|+.++||++.++++
T Consensus 162 --------------------------------~iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~ 195 (281)
T TIGR01556 162 --------------------------------RLGMMDEELFIDHVDTEWSLRAQNYGIPLYIDPD 195 (281)
T ss_pred --------------------------------HhCCccHhhcccchHHHHHHHHHHCCCEEEEeCC
Confidence 12334443 124899999999999999999986
No 63
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.26 E-value=1.2e-10 Score=126.13 Aligned_cols=124 Identities=19% Similarity=0.098 Sum_probs=89.3
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCC
Q 004562 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTIC 171 (745)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~ 171 (745)
..-|.|+|+||+ |||+ +.+.+++.++.++.++....+|+|+||||+|.|.+.+++. +.+
T Consensus 28 ~~~~~vSVVIPa---yNee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~--------------~~~--- 86 (306)
T PRK13915 28 KAGRTVSVVLPA---LNEE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAA--------------GAR--- 86 (306)
T ss_pred cCCCCEEEEEec---CCcH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHh--------------cch---
Confidence 356899999999 9999 5899999999987653224699999999999886533221 100
Q ss_pred ccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceE
Q 004562 172 PQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLL 251 (745)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l 251 (745)
.+. ..
T Consensus 87 ----------------------------v~~-----------------------------------------------~~ 91 (306)
T PRK13915 87 ----------------------------VVS-----------------------------------------------RE 91 (306)
T ss_pred ----------------------------hhc-----------------------------------------------ch
Confidence 000 00
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc-CCCCCCcEEEEcC
Q 004562 252 VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQF 323 (745)
Q Consensus 252 ~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~ 323 (745)
..+.+ .+ .+.||++|+|.++.. ++||+|+++|||....+|+++.+++..+. |++ +++|.+
T Consensus 92 ~~~~~--~~--~n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~----~~~V~g 152 (306)
T PRK13915 92 EILPE--LP--PRPGKGEALWRSLAA----TTGDIVVFVDADLINFDPMFVPGLLGPLLTDPG----VHLVKA 152 (306)
T ss_pred hhhhc--cc--cCCCHHHHHHHHHHh----cCCCEEEEEeCccccCCHHHHHHHHHHHHhCCC----ceEEEE
Confidence 00001 01 146899999999998 89999999999996334999999999886 666 677764
No 64
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.25 E-value=7.3e-11 Score=116.39 Aligned_cols=50 Identities=12% Similarity=0.105 Sum_probs=42.0
Q ss_pred eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhh
Q 004562 250 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (745)
Q Consensus 250 ~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (745)
++.++..++ +.||++|+|.+++. +.+|+|+++|+|..++ |+++.+++..+
T Consensus 56 ~i~~i~~~~-----n~G~~~a~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~ 105 (181)
T cd04187 56 RVKVIRLSR-----NFGQQAALLAGLDH----ARGDAVITMDADLQDP-PELIPEMLAKW 105 (181)
T ss_pred CEEEEEecC-----CCCcHHHHHHHHHh----cCCCEEEEEeCCCCCC-HHHHHHHHHHH
Confidence 456665444 46899999999999 8899999999999976 99999999874
No 65
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.18 E-value=3.3e-09 Score=115.89 Aligned_cols=111 Identities=16% Similarity=0.116 Sum_probs=81.5
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHc-CCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCc
Q 004562 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMA-LDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICP 172 (745)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~-~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p 172 (745)
.+.++|+||+ |||+ +.+.+++.++.+ ++-.....+|+|+|||++|.|.+.+.+.++
T Consensus 5 ~~~vSVVIP~---yNE~-~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~D~T~~il~~~~~------------------- 61 (325)
T PRK10714 5 IKKVSVVIPV---YNEQ-ESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAEMLVEAAQ------------------- 61 (325)
T ss_pred CCeEEEEEcc---cCch-hhHHHHHHHHHHHHHhCCCCEEEEEEeCCCCCcHHHHHHHHHh-------------------
Confidence 4679999999 9999 577877776643 111113489999999999988765443211
Q ss_pred cccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEE
Q 004562 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLV 252 (745)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~ 252 (745)
.+ -++++
T Consensus 62 ---------------------------~~----------------------------------------------~~~v~ 68 (325)
T PRK10714 62 ---------------------------AP----------------------------------------------DSHIV 68 (325)
T ss_pred ---------------------------hc----------------------------------------------CCcEE
Confidence 00 01244
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc
Q 004562 253 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (745)
Q Consensus 253 Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (745)
.+..++ +.||++|+|+|++. ++||+++++|||...+ |+.+.+++..+.
T Consensus 69 ~i~~~~-----n~G~~~A~~~G~~~----A~gd~vv~~DaD~q~~-p~~i~~l~~~~~ 116 (325)
T PRK10714 69 AILLNR-----NYGQHSAIMAGFSH----VTGDLIITLDADLQNP-PEEIPRLVAKAD 116 (325)
T ss_pred EEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCCC-HHHHHHHHHHHH
Confidence 443333 46999999999999 8999999999999976 999999998875
No 66
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.17 E-value=6.4e-10 Score=118.84 Aligned_cols=134 Identities=16% Similarity=0.122 Sum_probs=83.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHHHHH----
Q 004562 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSL---- 340 (745)
Q Consensus 265 ~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~---- 340 (745)
-++|.|.|.|++. +++|+|+++|+|++++ |+++.+++.+..+-.. ..-+++-.|..+.+.+.+..+....
T Consensus 74 f~~a~arN~g~~~----A~~d~l~flD~D~i~~-~~~i~~~~~~~~~l~~-~~~~~~~~p~~yl~~~~~~~~~~~~~~~~ 147 (281)
T PF10111_consen 74 FSRAKARNIGAKY----ARGDYLIFLDADCIPS-PDFIEKLLNHVKKLDK-NPNAFLVYPCLYLSEEGSEKFYSQFKNLW 147 (281)
T ss_pred cCHHHHHHHHHHH----cCCCEEEEEcCCeeeC-HHHHHHHHHHHHHHhc-CCCceEEEeeeeccchhhHHHhhcchhcc
Confidence 4899999999999 8999999999999987 9999999983211000 1124444566555433222222111
Q ss_pred --HHhhhhhHhhhhhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCCccchhhHH
Q 004562 341 --RSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQ 418 (745)
Q Consensus 341 --~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~~~~~ 418 (745)
...-+......+.++....+|++.+++|+...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~---------------------------------------------- 181 (281)
T PF10111_consen 148 DHEFLESFISGKNSLWEFIAFASSCFLINREDFL---------------------------------------------- 181 (281)
T ss_pred hHHHHHHHhhccccccccccccceEEEEEHHHHH----------------------------------------------
Confidence 11101111111222223345566677888762
Q ss_pred HhhhhhccccccccccccccccccCC---CccchHHHHHHHHHCCCeEEEeCC
Q 004562 419 QETEVLASCSYEHQTKWGEEVGFSYQ---SVSEDFFTGFILHCKGWTSTYLDP 468 (745)
Q Consensus 419 ~~~~~v~~c~ye~~t~wg~~~G~~~~---svtED~~t~~rl~~~Gwrsvy~~~ 468 (745)
+.|||++. --.||++.+.||...|.+..++++
T Consensus 182 ------------------~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~ 216 (281)
T PF10111_consen 182 ------------------EIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPD 216 (281)
T ss_pred ------------------HhCCCCccccCCCcchHHHHHHHHHcCCcEecChH
Confidence 23566644 236999999999999999887775
No 67
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.16 E-value=6e-10 Score=103.50 Aligned_cols=113 Identities=27% Similarity=0.258 Sum_probs=82.6
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCccccccc
Q 004562 99 VFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE 178 (745)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~~yf~~ 178 (745)
|+||+ +||+ ..+..|+.+++.++|+. .+++|+||++++.+.+.+.+..+
T Consensus 1 iii~~---~~~~-~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~------------------------- 49 (156)
T cd00761 1 VIIPA---YNEE-PYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLEILEEYAK------------------------- 49 (156)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHHHHHHHHh-------------------------
Confidence 57999 8887 58999999999999954 78999999999865443222110
Q ss_pred cccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccC
Q 004562 179 AESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREK 258 (745)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~k 258 (745)
. .+...++.+++
T Consensus 50 ------------------------~--------------------------------------------~~~~~~~~~~~ 61 (156)
T cd00761 50 ------------------------K--------------------------------------------DPRVIRVINEE 61 (156)
T ss_pred ------------------------c--------------------------------------------CCCeEEEEecC
Confidence 0 00123333333
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHh-hcCCCCCCcEEEEcCC
Q 004562 259 SPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF-HLDPKTSSSLAFVQFP 324 (745)
Q Consensus 259 rp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~-f~D~~~~~~vg~VQ~P 324 (745)
+.+|++++|.+++. .++|+++++|+|.++. |+++...+.. ..+++ .+.|+++
T Consensus 62 -----~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~~-~~~~~~~~~~~~~~~~----~~~v~~~ 114 (156)
T cd00761 62 -----NQGLAAARNAGLKA----ARGEYILFLDADDLLL-PDWLERLVAELLADPE----ADAVGGP 114 (156)
T ss_pred -----CCChHHHHHHHHHH----hcCCEEEEECCCCccC-ccHHHHHHHHHhcCCC----ceEEecc
Confidence 57999999999999 7899999999999976 8999887444 34444 6777654
No 68
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.13 E-value=2.2e-09 Score=116.02 Aligned_cols=121 Identities=17% Similarity=0.238 Sum_probs=89.8
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcc
Q 004562 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQ 173 (745)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~r~p~ 173 (745)
-|.+.++|+| ||-. +.+.+++.++.+++||.+ .++++|+|++|.|.+.+.+.
T Consensus 2 ~~~i~~iiv~---yn~~-~~l~~~l~~l~~~~~~~~--~iv~vDn~s~d~~~~~~~~~---------------------- 53 (305)
T COG1216 2 MPKISIIIVT---YNRG-EDLVECLASLAAQTYPDD--VIVVVDNGSTDGSLEALKAR---------------------- 53 (305)
T ss_pred CcceEEEEEe---cCCH-HHHHHHHHHHhcCCCCCc--EEEEccCCCCCCCHHHHHhh----------------------
Confidence 4789999999 8877 589999999999999984 35589999999775432210
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcceEEE
Q 004562 174 AYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVY 253 (745)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Y 253 (745)
..|++.+
T Consensus 54 -------------------------------------------------------------------------~~~~v~~ 60 (305)
T COG1216 54 -------------------------------------------------------------------------FFPNVRL 60 (305)
T ss_pred -------------------------------------------------------------------------cCCcEEE
Confidence 0245777
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCC-EEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcCCcc
Q 004562 254 VSREKSPEHLHHFKGGALNVLLRVSGVISNSP-YILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQK 326 (745)
Q Consensus 254 v~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~-~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~ 326 (745)
+.-.+ +-|=||+.|.+++.+. ++++ ++++++-|.+++ |++|.+++..+.+.. ..+.|+....
T Consensus 61 i~~~~-----NlG~agg~n~g~~~a~--~~~~~~~l~LN~D~~~~-~~~l~~ll~~~~~~~---~~~~~~~~i~ 123 (305)
T COG1216 61 IENGE-----NLGFAGGFNRGIKYAL--AKGDDYVLLLNPDTVVE-PDLLEELLKAAEEDP---AAGVVGPLIR 123 (305)
T ss_pred EEcCC-----CccchhhhhHHHHHHh--cCCCcEEEEEcCCeeeC-hhHHHHHHHHHHhCC---CCeEeeeeEe
Confidence 76544 4678999999998842 3444 899999998876 999999999886322 2666654433
No 69
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.06 E-value=3.8e-09 Score=124.69 Aligned_cols=167 Identities=18% Similarity=0.239 Sum_probs=110.3
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc-CCCCCCcEEEEcCCcccccCCcc-ChHHHHHHHh
Q 004562 266 FKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEH-DIYDGSLRSG 343 (745)
Q Consensus 266 ~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~-d~~~~~~~~f 343 (745)
.|-=.+|.+.... +.+-++|+.+|+|+.+. |+++.+++.-|. ||+ ||-+.+ +..|.... -.+.+..+..
T Consensus 425 ~~r~~~y~~~~~L--~~~v~~il~vD~dT~~~-P~ai~~lv~~f~~dp~----VggaCG--~I~~~~~~w~v~~Q~FEY~ 495 (862)
T KOG2571|consen 425 QHRWVMYTAFKAL--MPSVDYILVVDADTRLD-PDALYHLVKVFDEDPQ----VGGACG--RILNKGGSWVVAYQNFEYA 495 (862)
T ss_pred HHHHHHHHHHHHh--cCcceEEEEecCCCccC-cHHHHHHHHHhccCcc----cceecc--ccccCCCceEEeHHHHHHH
Confidence 4444556655553 25567999999999986 999999999986 776 777766 33332111 0111222211
Q ss_pred h-hhhHhhhhhcCCcccccccc--chhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCCccchhhHHHh
Q 004562 344 Y-RLQWPGMDGLKGPFLTGTGH--YIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQE 420 (745)
Q Consensus 344 ~-~~~~~g~d~~~~~~~~Gtg~--~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~~~~~~~ 420 (745)
. ...++..+..-|-+.|=.|| +||-+||.+.. .+..+|...
T Consensus 496 Ish~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~---------~~~~y~~~~--------------------------- 539 (862)
T KOG2571|consen 496 ISHNLQKATESVFGCVSCLPGCFSLYRASALMDQF---------VEYFYGEKF--------------------------- 539 (862)
T ss_pred HHHHHHHhhhhhceeEEecCchhHHHHHHHHhcch---------HHhhhchhh---------------------------
Confidence 1 23455556666666665666 59999996511 111111100
Q ss_pred hhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHHhhcc
Q 004562 421 TEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASG 494 (745)
Q Consensus 421 ~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G 494 (745)
+ |..-|..+ +..||-.+..++..+||+.-||.. +.+...+|+++.+++.||+||.-|
T Consensus 540 ---------~-----~~~~~~~~-~~geDR~L~~~llskgy~l~Y~a~--s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 540 ---------S-----GPRHGIQY-SLGEDRWLCTLLLSKGYRLKYVAA--SDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred ---------c-----Cccccccc-ccchhHHHHHHHHhccceeeeecc--ccccccCcHhHHHHHHHhhhhccc
Confidence 0 00113333 489999999999999999999996 688999999999999999999999
No 70
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.82 E-value=3.5e-08 Score=94.33 Aligned_cols=47 Identities=23% Similarity=0.284 Sum_probs=43.4
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchH
Q 004562 94 LPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLR 146 (745)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~ 146 (745)
.|.++|+||| |||+ ..+.++|.|++++.|+. .+|+|+|||++|.|.+
T Consensus 2 ~~~~siiip~---~n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~ 48 (291)
T COG0463 2 MPKVSVVIPT---YNEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTE 48 (291)
T ss_pred CccEEEEEec---cchh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHH
Confidence 4889999999 9999 79999999999999998 7799999999998764
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.79 E-value=4.6e-08 Score=101.07 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=39.0
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCC
Q 004562 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (745)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~ 312 (745)
..+++.+.|.|+.. +.+|+|+++|+|..+. |+.+.++...+.++
T Consensus 56 ~~g~~~~~n~~~~~----a~~d~vl~lDaD~~~~-~~~~~~l~~~~~~~ 99 (229)
T cd02511 56 WDGFGAQRNFALEL----ATNDWVLSLDADERLT-PELADEILALLATD 99 (229)
T ss_pred CCChHHHHHHHHHh----CCCCEEEEEeCCcCcC-HHHHHHHHHHHhCC
Confidence 46899999999999 8899999999999986 99999998887653
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.68 E-value=1.5e-07 Score=101.03 Aligned_cols=153 Identities=20% Similarity=0.275 Sum_probs=106.2
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEE-cCCcccccCCccChHHHHHHH
Q 004562 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFV-QFPQKFHNFNEHDIYDGSLRS 342 (745)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V-Q~Pq~f~n~~~~d~~~~~~~~ 342 (745)
-+.|-.||=-|.+. ++.|+|++.|.|-.+- ||.+.+...-|+.++ ++|+| |+|-.+....-+-.+.+ +
T Consensus 155 ~npKInN~mpgy~~----a~ydlvlisDsgI~m~-pdtildm~t~M~she---kmalvtq~py~~dr~Gf~atle~---~ 223 (431)
T KOG2547|consen 155 LNPKINNMMPGYRA----AKYDLVLISDSGIFMK-PDTILDMATTMMSHE---KMALVTQTPYCKDRQGFDATLEQ---V 223 (431)
T ss_pred cChhhhccCHHHHH----hcCCEEEEecCCeeec-CchHHHHHHhhhccc---ceeeecCCceeeccccchhhhhh---e
Confidence 45688888889998 8999999999999885 999999888887554 48988 56655442211111111 3
Q ss_pred hhhhhHhhh----hhcCCccccccccchhhhhccCCccccccchHhhhhhhCCchhHHhhhhhhccccccCCccchhhHH
Q 004562 343 GYRLQWPGM----DGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQ 418 (745)
Q Consensus 343 f~~~~~~g~----d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~v~s~~~~~~~~~~~~~~~~~~~~ 418 (745)
+|...++.. +-.+-..+.|-.|+.|+++| |
T Consensus 224 ~fgTsh~r~yl~~n~~~~~c~tgms~~mrK~~l---------d------------------------------------- 257 (431)
T KOG2547|consen 224 YFGTSHPRIYLSGNVLGFNCSTGMSSMMRKEAL---------D------------------------------------- 257 (431)
T ss_pred eeccCCceEEEccccccccccccHHHHHHHHHH---------H-------------------------------------
Confidence 443332211 11222334567788999999 2
Q ss_pred Hhhhhhcccccccccccccccccc--CCCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccCCChHHHHhHhHHhhc
Q 004562 419 QETEVLASCSYEHQTKWGEEVGFS--YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWAS 493 (745)
Q Consensus 419 ~~~~~v~~c~ye~~t~wg~~~G~~--~~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP~~l~~~l~Qr~RWa~ 493 (745)
+.+|+. .+.+.||...+-.+..+||++.+... ++-...+--+...+..|-.||..
T Consensus 258 ------------------~~ggi~~f~~yLaedyFaaksllSRG~ksaist~--palQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 258 ------------------ECGGISAFGGYLAEDYFAAKSLLSRGWKSAISTH--PALQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred ------------------HhccHHHHHHHHHHHHHHHHHHHhhhhhhhhccc--chhhhhhhhHHHHHHHHHHHhhh
Confidence 123322 24689999999999999999999874 45556666888888999999984
No 73
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=98.03 E-value=3.1e-05 Score=81.13 Aligned_cols=129 Identities=19% Similarity=0.153 Sum_probs=83.4
Q ss_pred ceEEEEecCCCCCCch---HHHHHHHHHHHcCCCCC---CceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhccccc
Q 004562 96 AIDVFICTADPEKEPT---FGVMNTVLSAMALDYPV---DKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKT 169 (745)
Q Consensus 96 ~VdV~I~t~~pynEp~---~~v~~Tv~s~~~~dYP~---~kl~Vyv~DDg~~~~T~~~l~Ea~~fa~~wvpfc~k~~v~~ 169 (745)
..+|+||+ |||+- .++..|+..+. -.|-. =+.+|+|+|||+.|.|.+.. +.||+|+|.+
T Consensus 68 ~lsVIVpa---ynE~~ri~~mldeav~~le-~ry~~~~~F~~eiiVvddgs~d~T~~~a----------~k~s~K~~~d- 132 (323)
T KOG2977|consen 68 YLSVIVPA---YNEEGRIGAMLDEAVDYLE-KRYLSDKSFTYEIIVVDDGSTDSTVEVA----------LKFSRKLGDD- 132 (323)
T ss_pred eeEEEEec---CCcccchHHHHHHHHHHHH-HHhccCCCCceeEEEeCCCCchhHHHHH----------HHHHHHcCcc-
Confidence 78999999 99983 23344444433 34444 37899999999999886532 2477777631
Q ss_pred CCccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeccCCCCchhhhhccccCcc
Q 004562 170 ICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMP 249 (745)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P 249 (745)
T Consensus 133 -------------------------------------------------------------------------------- 132 (323)
T KOG2977|consen 133 -------------------------------------------------------------------------------- 132 (323)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCC--CCCccHHHHHHHHhhcCCCCCCcEEEEcCCccc
Q 004562 250 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDM--YCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKF 327 (745)
Q Consensus 250 ~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~--~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f 327 (745)
+++.+.-.+ +.+|.||..-++-+ +.|+++++.|||- ..++-+.|.+++.--..|....+|+ +-+|-+-
T Consensus 133 ~irV~~l~~-----nrgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~~~~~p~~r~~va-~GsrahL 202 (323)
T KOG2977|consen 133 NIRVIKLKK-----NRGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALNDKAGPGPRDDVA-CGSRAHL 202 (323)
T ss_pred eEEEeehhc-----cCCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHHhhcCCCCCCcee-ecCHHHh
Confidence 234443333 57899999999888 8999999999994 3444566777766443332222233 3355544
Q ss_pred cc
Q 004562 328 HN 329 (745)
Q Consensus 328 ~n 329 (745)
.|
T Consensus 203 e~ 204 (323)
T KOG2977|consen 203 EN 204 (323)
T ss_pred hc
Confidence 44
No 74
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=97.97 E-value=6.2e-05 Score=82.34 Aligned_cols=44 Identities=20% Similarity=0.267 Sum_probs=36.9
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccc
Q 004562 97 IDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPIT 144 (745)
Q Consensus 97 VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T 144 (745)
+-|+|.| ||-| +.+++||.|++++.+-.+..+|+|++||+++.|
T Consensus 2 ~PVlv~a---yNRp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~ 45 (334)
T cd02514 2 IPVLVIA---CNRP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEV 45 (334)
T ss_pred cCEEEEe---cCCH-HHHHHHHHHHHhccccCCCceEEEEeCCCchHH
Confidence 3588999 8887 799999999999874456789999999998743
No 75
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=97.94 E-value=0.0002 Score=70.89 Aligned_cols=60 Identities=17% Similarity=0.150 Sum_probs=44.5
Q ss_pred eEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcC
Q 004562 250 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQF 323 (745)
Q Consensus 250 ~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~ 323 (745)
++....|.+ .-+=.-|--+++.+ +.|+|+++.|||--- +|.++-+.+..-.+- +..+|-+
T Consensus 64 ~i~l~pR~~-----klGLgtAy~hgl~~----a~g~fiviMDaDlsH-hPk~ipe~i~lq~~~----~~div~G 123 (238)
T KOG2978|consen 64 NILLKPRTK-----KLGLGTAYIHGLKH----ATGDFIVIMDADLSH-HPKFIPEFIRLQKEG----NYDIVLG 123 (238)
T ss_pred cEEEEeccC-----cccchHHHHhhhhh----ccCCeEEEEeCccCC-CchhHHHHHHHhhcc----Ccceeee
Confidence 567777765 35667788899999 999999999999764 588888776654432 3566754
No 76
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.96 E-value=0.0014 Score=71.26 Aligned_cols=49 Identities=24% Similarity=0.179 Sum_probs=40.7
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCc
Q 004562 91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSP 142 (745)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~ 142 (745)
++++|+++|+|.- +||--..+++||.|++.-.=|+---+|+++||-++.
T Consensus 151 pe~Lpt~SVviVF---HNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 151 PENLPTSSVVIVF---HNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred cccCCcceEEEEE---ecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 6789999999999 899999999999999987644334578888887754
No 77
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.90 E-value=0.022 Score=62.49 Aligned_cols=49 Identities=22% Similarity=0.175 Sum_probs=43.2
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCcc
Q 004562 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI 143 (745)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~ 143 (745)
.++|.-+|+|+- +||....+-+||.|+++..=++=-.+|+++||++.|.
T Consensus 121 ~dlp~TsviITf---HNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dp 169 (559)
T KOG3738|consen 121 VDLPPTSVIITF---HNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDP 169 (559)
T ss_pred cCCCCceEEEEe---ccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCCh
Confidence 579999999999 8999999999999999987444467899999999984
No 78
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=95.48 E-value=0.26 Score=59.45 Aligned_cols=74 Identities=24% Similarity=0.295 Sum_probs=51.7
Q ss_pred CCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccC-CChHHHHhHhHHhhcccccccccccCccccCCCCCChhHHHHHH
Q 004562 444 QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST-TNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYG 522 (745)
Q Consensus 444 ~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP-~~l~~~l~Qr~RWa~G~~qi~~~r~~pl~~~~~~l~~~qrl~Y~ 522 (745)
-.++||+..||...+||-++.||.- ...|-.- -.+.+-..=-.+-+.|+=|..+||.--.+ + .+|.+-.-+.+.
T Consensus 408 lhLsEDIfaG~n~~lRGG~i~h~ey---~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrL-g-~~ld~~R~LSfy 482 (817)
T PF02364_consen 408 LHLSEDIFAGMNATLRGGRIKHCEY---IQCGKGRDVGFNSILNFETKIASGMGEQMLSREYYRL-G-TRLDFFRFLSFY 482 (817)
T ss_pred ccccHHHHHHHHHHhcCCceeehhh---hhcccccccCchhhhhhHhHhcCCccchhhhHHHHHh-h-ccCCHHHHHHHH
Confidence 3799999999999999999999974 3444433 23555555567889999999988742222 2 567666555433
No 79
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=95.29 E-value=0.042 Score=48.81 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=28.6
Q ss_pred CCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchH
Q 004562 107 EKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLR 146 (745)
Q Consensus 107 ynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~ 146 (745)
+||+. .+...|..-+++.+-+ +||.|||++|.|.+
T Consensus 1 rne~~-~L~~wl~~~~~lG~d~----i~i~d~~s~D~t~~ 35 (97)
T PF13704_consen 1 RNEAD-YLPEWLAHHLALGVDH----IYIYDDGSTDGTRE 35 (97)
T ss_pred CChHH-HHHHHHHHHHHcCCCE----EEEEECCCCccHHH
Confidence 47874 8899999988887643 99999999998754
No 80
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.62 E-value=0.028 Score=65.57 Aligned_cols=48 Identities=29% Similarity=0.274 Sum_probs=41.1
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCc
Q 004562 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSP 142 (745)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~ 142 (745)
+.+|+++|+|+- +||...++.+||.|+....=|.--.+|+++||+++.
T Consensus 139 ~~Lp~~Svii~f---~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~ 186 (578)
T KOG3736|consen 139 DKLPTTSVIIIF---HNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDR 186 (578)
T ss_pred cccCCCceEEEE---ecCCCcchhheEEeehccCChhHeEEEEEeecCcch
Confidence 569999999999 899999999999998887744446689999999875
No 81
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=92.59 E-value=0.33 Score=50.25 Aligned_cols=49 Identities=14% Similarity=0.262 Sum_probs=39.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhh-cCCCCCCcEEEE
Q 004562 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFV 321 (745)
Q Consensus 265 ~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~V 321 (745)
..-|-+.|.|++. ++++|++++.-|..+.+++++.+++..| .||+ +|.+
T Consensus 40 ~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~----~G~i 89 (217)
T PF13712_consen 40 KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDPN----IGMI 89 (217)
T ss_dssp S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-TT----EEEE
T ss_pred cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCC----ccEE
Confidence 4567799999999 8999999999999988899999999999 7877 7666
No 82
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=90.28 E-value=1.9 Score=49.02 Aligned_cols=49 Identities=24% Similarity=0.357 Sum_probs=30.3
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCC-CCceEEEEEcCCCCccch
Q 004562 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYP-VDKLHVYLSDDGGSPITL 145 (745)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP-~~kl~Vyv~DDg~~~~T~ 145 (745)
...|.+-|+|-+ +|-| .-+.+||.++++.. | +++..|+|+.||+.+.|.
T Consensus 90 ~~~~~~pVlV~A---cNRp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~~ 139 (434)
T PF03071_consen 90 NKEPVIPVLVFA---CNRP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEVA 139 (434)
T ss_dssp -------EEEEE---SS-T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHHH
T ss_pred cCCCcceEEEEe---cCCc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHHH
Confidence 346778888888 6787 58999999999988 6 468899999999987543
No 83
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=89.59 E-value=4.2 Score=43.12 Aligned_cols=81 Identities=21% Similarity=0.176 Sum_probs=42.0
Q ss_pred cceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcE-EEEcCCcc
Q 004562 248 MPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSL-AFVQFPQK 326 (745)
Q Consensus 248 ~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~v-g~VQ~Pq~ 326 (745)
+|++.|+.-. .|.. -..-+---|+|...|-.-.++++|+++|+|++.. .|-..+.+..-.-.++..++ ++.--|..
T Consensus 61 ~~~~~yl~~~-s~~~-F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S-~dnF~k~l~~~~ikk~~tnI~a~~vlPV~ 137 (346)
T COG4092 61 MPRVLYLDFG-SPEP-FASETICANNGADYSHEKCESNLVLFLDVDCFGS-SDNFAKMLSIATIKKMRTNIDAPLVLPVY 137 (346)
T ss_pred ccceEEEecC-CCcc-ccchhhhhhccchhhhccccccEEEEEecccccc-HHHHHHHHHHHHHHHHHhccCcceeeeee
Confidence 4677887642 2221 1111333455554422224689999999999986 45444444322111112224 45556777
Q ss_pred cccCC
Q 004562 327 FHNFN 331 (745)
Q Consensus 327 f~n~~ 331 (745)
|-|..
T Consensus 138 ~LNk~ 142 (346)
T COG4092 138 HLNKA 142 (346)
T ss_pred ecchh
Confidence 77653
No 84
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=87.46 E-value=7.8 Score=41.50 Aligned_cols=56 Identities=14% Similarity=0.206 Sum_probs=39.8
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEE-EEEcCCCC-ccchHhHHHH
Q 004562 92 DKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHV-YLSDDGGS-PITLRGMREA 151 (745)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~V-yv~DDg~~-~~T~~~l~Ea 151 (745)
..-|+|=|+.|-.| +| ..+.+=...+.+++||++++++ .++.|.+. +.|.+.|.++
T Consensus 22 ~~~e~VLILtplrn--a~--~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~ 79 (269)
T PF03452_consen 22 RNKESVLILTPLRN--AA--SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAA 79 (269)
T ss_pred ccCCeEEEEEecCC--ch--HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHH
Confidence 45688999999854 24 3688999999999999999999 44444431 5565555443
No 85
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=85.40 E-value=5.8 Score=43.58 Aligned_cols=41 Identities=20% Similarity=0.229 Sum_probs=30.6
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHH
Q 004562 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (745)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~ 307 (745)
+.||+-.|=-++-.+. +...+||-++|||.++ |.++.+-+.
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk 181 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVK 181 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHH
Confidence 5789988887775432 1467999999999997 577766443
No 86
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=85.16 E-value=5.9 Score=43.76 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=31.5
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhh
Q 004562 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (745)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (745)
+.||+-.|=-++-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~y 184 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIY 184 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHH
Confidence 5789988887775432 1567999999999997 57776654433
No 87
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=81.68 E-value=7.7 Score=42.90 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=26.7
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHH
Q 004562 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM 306 (745)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v 306 (745)
++||+-.|=-++-.+. +...+||-++|||.++ |.++.+-+
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYv 180 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYV 180 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHH
Confidence 5799999988875432 1567999999999996 68876644
No 88
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=81.46 E-value=2.4 Score=53.51 Aligned_cols=71 Identities=23% Similarity=0.283 Sum_probs=45.5
Q ss_pred CCccchHHHHHHHHHCCCeEEEeCCCCCeeEeccC-CChHHHHhHhHHhhcccccccccccCccccCCCCCChhHHH
Q 004562 444 QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST-TNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSM 519 (745)
Q Consensus 444 ~svtED~~t~~rl~~~Gwrsvy~~~~~~~~~g~aP-~~l~~~l~Qr~RWa~G~~qi~~~r~~pl~~~~~~l~~~qrl 519 (745)
-.++||+.-||.-..||-++.+|.- ...|-.- -.+.+-..=-.+-+.|+=|..+||.-= ..| .++.+-.=|
T Consensus 1172 inlsEDIfAG~n~tlRgG~itH~EY---iQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~Y-rLG-~~ldffRmL 1243 (1679)
T KOG0916|consen 1172 INLSEDIFAGFNATLRGGNITHHEY---IQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYY-RLG-TQLDFFRML 1243 (1679)
T ss_pred cccchHhhhhhhHHhhCCCccccee---eecccccccCcchhhhhhhhhcCCCcchhhhHHHH-Hhc-ccccHHHHH
Confidence 3789999999999999999998873 2233222 123333344457789999988887421 112 355554444
No 89
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=79.62 E-value=19 Score=35.71 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=30.1
Q ss_pred CCCchHHHHHHHHHHHc-----------CCCCC---CceEEEEEcCCCCccch
Q 004562 107 EKEPTFGVMNTVLSAMA-----------LDYPV---DKLHVYLSDDGGSPITL 145 (745)
Q Consensus 107 ynEp~~~v~~Tv~s~~~-----------~dYP~---~kl~Vyv~DDg~~~~T~ 145 (745)
|||+...+.+|+.+++. -.+.. .|+-|-|+-||....--
T Consensus 2 YNEd~~ll~rTL~gv~~Ni~~l~~r~~s~~wG~d~WkkiVVcIv~DGr~ki~~ 54 (163)
T PF01644_consen 2 YNEDEILLARTLHGVMKNIAHLCSRKRSKTWGKDAWKKIVVCIVSDGRAKINP 54 (163)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCcCCcCCCCCCcEEEEEEEecCcccCCH
Confidence 89999999999999875 12333 37889999999986443
No 90
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=79.01 E-value=10 Score=39.45 Aligned_cols=53 Identities=11% Similarity=-0.135 Sum_probs=35.5
Q ss_pred cchHHHHHHHHHCCCeEEEeCCCCC----ee------EeccCCChHHHHhHhHHhhccccccc
Q 004562 447 SEDFFTGFILHCKGWTSTYLDPSRP----QF------LGTSTTNLNDVLIQGTRWASGLIDVS 499 (745)
Q Consensus 447 tED~~t~~rl~~~Gwrsvy~~~~~~----~~------~g~aP~~l~~~l~Qr~RWa~G~~qi~ 499 (745)
.||-+.+.||..+|.+......... .- ....|.-+.....++.||+..++.-+
T Consensus 138 gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl 200 (219)
T cd00899 138 GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSL 200 (219)
T ss_pred cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccce
Confidence 4999999999999988765553211 00 12344455666778888888877654
No 91
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=76.78 E-value=15 Score=44.27 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=31.1
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHH
Q 004562 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (745)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~ 307 (745)
+.||+-.|=-++-.+. +...+||-++|||.++ |.++.+-+.
T Consensus 146 r~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~ 186 (694)
T PRK14502 146 RSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAK 186 (694)
T ss_pred ecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHH
Confidence 5789988888775532 2677999999999998 577766444
No 92
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=57.08 E-value=14 Score=40.56 Aligned_cols=46 Identities=26% Similarity=0.289 Sum_probs=32.0
Q ss_pred HHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEE
Q 004562 271 LNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFV 321 (745)
Q Consensus 271 LN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V 321 (745)
-|.|+.. +..++|+++|+|+++. ++.-+....+........+.++|
T Consensus 119 RNvAr~~----a~T~~v~~~DvD~~ps-~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 119 RNVARSG----ARTDYVFLLDVDFLPS-PGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHHh----cCcceEEEecceeeeC-cchHHHHHHHhhhhccCCceEEE
Confidence 3667776 8899999999999876 67766655544322234557777
No 93
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=51.56 E-value=1.4e+02 Score=34.98 Aligned_cols=47 Identities=17% Similarity=0.226 Sum_probs=36.2
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHH
Q 004562 251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 305 (745)
Q Consensus 251 l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~ 305 (745)
+.+|..... .-.++.+|+.+++.. .+.++++++|.|+..+ +++|.++
T Consensus 316 i~~i~~~~~----~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f~-~~fL~rc 362 (499)
T PF05679_consen 316 IKWISVKTG----EFSRGAALDVGAKKF---PPDSLLFFCDVDMVFT-SDFLNRC 362 (499)
T ss_pred eEEEEecCC----CccHHHHHHhhcccC---CCCcEEEEEeCCcccC-HHHHHHH
Confidence 566655411 467899999999863 4567999999999987 9999874
No 94
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=49.06 E-value=41 Score=37.94 Aligned_cols=40 Identities=13% Similarity=-0.001 Sum_probs=30.0
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc
Q 004562 267 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (745)
Q Consensus 267 KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (745)
...++-+|++. .+.+++++.|||+=.-+++.+++++..+.
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 45678888876 34599999999964445888888877654
No 95
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=48.62 E-value=2.2e+02 Score=29.34 Aligned_cols=59 Identities=5% Similarity=-0.034 Sum_probs=39.6
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhcCCCCCCcEEEEcC
Q 004562 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQF 323 (745)
Q Consensus 265 ~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~ 323 (745)
.+...++-+++.......+.|.|++++||+=.-+++.+.+++..|.+.+.+.-+..+..
T Consensus 76 ~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~~ 134 (222)
T TIGR03584 76 TGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTSF 134 (222)
T ss_pred CCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeecc
Confidence 45566677777652110246899999999876678999999988875433444555553
No 96
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=37.31 E-value=31 Score=29.85 Aligned_cols=22 Identities=18% Similarity=-0.136 Sum_probs=15.6
Q ss_pred cchHHHHHHHHHCCCeEEEeCC
Q 004562 447 SEDFFTGFILHCKGWTSTYLDP 468 (745)
Q Consensus 447 tED~~t~~rl~~~Gwrsvy~~~ 468 (745)
-||.+...|+..+|.+....+.
T Consensus 46 ~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 46 GEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp SHHHHHHHHHHHTT---B-SST
T ss_pred ccHHHHHHHHHHcCCeEEecCC
Confidence 3999999999999998776554
No 97
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=35.76 E-value=3.6e+02 Score=28.35 Aligned_cols=55 Identities=13% Similarity=0.016 Sum_probs=33.6
Q ss_pred cceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEe--CCCCCCCccHHHHHHHHhhc
Q 004562 248 MPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGL--DCDMYCNDPTSARQAMCFHL 310 (745)
Q Consensus 248 ~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~l--DAD~~~~~p~~L~~~v~~f~ 310 (745)
+|.++.+.++. +....++..+++.... ..+++++.+ |.|--+. .|+++++-.+..
T Consensus 84 ~p~~~i~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~RLDdDDAl~-~dFV~rlr~~a~ 140 (234)
T PF11316_consen 84 YPQFRIVFRPP------GPHRDAMRRAINAARR-DGADPVLQFRLDDDDALH-RDFVARLRRAAA 140 (234)
T ss_pred CCCcEEEecCC------chHHHHHHHHHhhhcc-CCCCEEEEEEECCcchhh-HHHHHHHHHHHH
Confidence 34445554432 2355677777744221 345655554 9977666 899988887774
No 98
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=29.47 E-value=1.5e+02 Score=28.62 Aligned_cols=44 Identities=14% Similarity=0.030 Sum_probs=34.0
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCccHHHHHHHHhhc
Q 004562 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHL 310 (745)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~-~~~~p~~L~~~v~~f~ 310 (745)
..+-+.++..|++... .+.|.+++++||+ .++ ++.+++++..+.
T Consensus 73 ~~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~ 117 (186)
T cd04182 73 EEGMSSSLAAGLEALP--ADADAVLILLADQPLVT-AETLRALIDAFR 117 (186)
T ss_pred hhCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCCC-HHHHHHHHHHHH
Confidence 3577888999998732 1478999999999 444 888888887765
No 99
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=28.71 E-value=1.6e+02 Score=31.08 Aligned_cols=30 Identities=27% Similarity=0.343 Sum_probs=22.7
Q ss_pred CCCCEEEEeCCCCCCCccHHHHHHHHhhcCCC
Q 004562 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (745)
Q Consensus 282 s~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~ 313 (745)
++.+..+.+|-|++++ .+-|++.+.-| ||.
T Consensus 85 ~~~~Wf~~~DDDtyv~-~~~L~~~L~~~-~~~ 114 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVN-VENLRRLLSKY-DPS 114 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS--TT
T ss_pred CCceEEEEEeCCceec-HHHHHHHHhhC-CCc
Confidence 4679999999999997 88888888765 444
No 100
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=28.27 E-value=1.8e+02 Score=28.47 Aligned_cols=42 Identities=12% Similarity=0.105 Sum_probs=33.6
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCccHHHHHHHHhhc
Q 004562 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHL 310 (745)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~-~~~~p~~L~~~v~~f~ 310 (745)
..+-.+++-.+++. .+.+.+++++||+ +++ ++.+++++..+.
T Consensus 72 ~~g~~~si~~al~~----~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~ 114 (186)
T TIGR02665 72 FPGPLAGILAGLRW----AGTDWVLTVPCDTPFLP-EDLVARLAAALE 114 (186)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEecCCCcCC-HHHHHHHHHHhh
Confidence 35778888888887 4578999999999 454 899988888765
No 101
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=27.99 E-value=2e+02 Score=31.77 Aligned_cols=35 Identities=14% Similarity=0.206 Sum_probs=25.4
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHH
Q 004562 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA 302 (745)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L 302 (745)
.+.+..=-|..+.. +...++++=+||||+-. ++-|
T Consensus 159 ~n~l~~YYNy~ls~---ipk~~w~iKID~DhIy~-~~KL 193 (347)
T PF06306_consen 159 ENSLYNYYNYVLSF---IPKNEWAIKIDADHIYD-TKKL 193 (347)
T ss_pred hhhhhhhhhhhhcc---cccceEEEEeccceeec-HHHH
Confidence 44566677777765 25689999999999964 6554
No 102
>COG3548 Predicted integral membrane protein [Function unknown]
Probab=27.26 E-value=7e+02 Score=25.67 Aligned_cols=74 Identities=8% Similarity=0.088 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcC------Cch--HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchhHHHHHHHH
Q 004562 661 LVPMVSLMILNVAALVCGVIRMIAVG------NWD--KLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVF 732 (745)
Q Consensus 661 ~~P~~~l~~l~l~al~~g~~r~~~~g------~~~--~~~~~~~~~~~~~~~~~p~~~~l~~r~~~~~~p~~~~~~~~~~ 732 (745)
+.|.+...+++.+ +.++++.-.+. ... -...|.+|.++ +.+.||.-+..++......|....+....+
T Consensus 49 l~~~l~~Y~lSF~--~v~~~W~n~h~~f~~ikki~~~i~~~N~i~L~~--vsLlPfsT~~~~~~~~~~~~~~~~~~~l~l 124 (197)
T COG3548 49 LLSSLIIYALSFL--VVAIFWFNHHRIFGRIKKITGRIIWINFIWLLL--VSLLPFSTAWIGEIHTDFLPALLYLVLLLL 124 (197)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcccchhhHHHHHHHH--HHHHHHHHHHHhcccCCcccHHHHHHHHHH
Confidence 4455555666655 33444433321 111 13456666665 789999999998877777787777776555
Q ss_pred HHHHHH
Q 004562 733 FVTFLF 738 (745)
Q Consensus 733 ~~~~~~ 738 (745)
...-++
T Consensus 125 ~~~~~l 130 (197)
T COG3548 125 IAFAYL 130 (197)
T ss_pred HHHHHH
Confidence 544333
No 103
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=26.54 E-value=2.2e+02 Score=28.74 Aligned_cols=45 Identities=18% Similarity=0.130 Sum_probs=33.8
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCccHHHHHHHHhhcC
Q 004562 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 311 (745)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~-~~~~p~~L~~~v~~f~D 311 (745)
..+.++++-+++.... .+.+.+++++||+ ... ++.+.+++..+.+
T Consensus 72 ~~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~~-~~~i~~l~~~~~~ 117 (229)
T cd02540 72 QLGTGHAVKQALPALK--DFEGDVLVLYGDVPLIT-PETLQRLLEAHRE 117 (229)
T ss_pred CCCCHHHHHHHHHhhc--cCCCeEEEEeCCccccC-HHHHHHHHHHHHh
Confidence 3578999999998732 1268899999999 344 7888888887754
No 104
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=26.22 E-value=2.3e+02 Score=33.04 Aligned_cols=83 Identities=17% Similarity=0.310 Sum_probs=51.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhhhcC---Cc---------hHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchh
Q 004562 657 SSVFLVPMVSLMILNVAALVCGVIRMIAVG---NW---------DKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPS 724 (745)
Q Consensus 657 ~~~l~~P~~~l~~l~l~al~~g~~r~~~~g---~~---------~~~~~~~~~~~~~~~~~~p~~~~l~~r~~~~~~p~~ 724 (745)
.+..+.+.+ -.+|.+++++--+..++.+. .| +++ ++...+=+++|..=.-|++.|+.+..+|.+
T Consensus 88 c~r~l~~~~-~~~L~l~aflSPiaflvLP~il~~~~~~~C~~~CeGl---lislafKLliLlig~WAlf~R~~~a~lPRi 163 (505)
T PF06638_consen 88 CSRYLGLIL-ASILGLLAFLSPIAFLVLPKILWRWQLEPCGAECEGL---LISLAFKLLILLIGTWALFFRRPRADLPRI 163 (505)
T ss_pred cceeHHHHH-HHHHHHHHHHhhHHHHHhcccccCccccccCCcccce---eHHHHHHHHHHHHHHHHHhcCcccCCCchh
Confidence 444444443 34667777776666555421 11 222 222233334444445567789999999999
Q ss_pred HHHHHHHHHHHHHHhhhcc
Q 004562 725 AILLSSVFFVTFLFFGSII 743 (745)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~ 743 (745)
-++.+++++++|.++.++-
T Consensus 164 f~fRa~ll~Lvfl~~~syW 182 (505)
T PF06638_consen 164 FVFRALLLVLVFLFLFSYW 182 (505)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999998876653
No 105
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=26.09 E-value=2.2e+02 Score=27.67 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=34.2
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhh
Q 004562 264 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (745)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f 309 (745)
..+-.+++..|++. .+.+.+++++||+-.-+++.+++++..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 45778899999998 5689999999999433589998888766
No 106
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=25.27 E-value=1.8e+02 Score=32.62 Aligned_cols=36 Identities=33% Similarity=0.464 Sum_probs=26.1
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHH
Q 004562 267 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQ 304 (745)
Q Consensus 267 KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~ 304 (745)
.-.+|+..++..+ +..+|+|++-|.|-+++ |+.++.
T Consensus 163 qR~~l~~l~~~~~-~~~dDliivSDvDEIP~-p~~l~~ 198 (356)
T PF04724_consen 163 QRNALNGLLRLAG-IQDDDLIIVSDVDEIPS-PETLKF 198 (356)
T ss_pred HHHHHHHHhhhcC-CCCCCEEEEcCcccccC-HHHHHH
Confidence 3345666665544 37899999999999975 877743
No 107
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=21.64 E-value=3.1e+02 Score=27.56 Aligned_cols=42 Identities=14% Similarity=-0.018 Sum_probs=32.7
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc
Q 004562 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (745)
Q Consensus 265 ~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (745)
.+-.+++-.+++. .+.+.+++++||+=.-.++.+++++..+.
T Consensus 78 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 78 QGPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred CChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 4556778888876 55789999999996556888888887664
No 108
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=21.38 E-value=2.3e+02 Score=27.52 Aligned_cols=43 Identities=14% Similarity=-0.044 Sum_probs=32.0
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHHhhc
Q 004562 265 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (745)
Q Consensus 265 ~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~~f~ 310 (745)
.+-++++-.+++. ..+.+.+++++||+-.-+++.+++++..+.
T Consensus 74 ~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 116 (188)
T TIGR03310 74 EGQSSSIKLGLEL---PVQSDGYLFLLGDQPFVTPDIIQLLLEAFA 116 (188)
T ss_pred cCHHHHHHHHhcC---CCCCCEEEEEeCCcCCCCHHHHHHHHHHHH
Confidence 4567778888872 156789999999994334889999888765
No 109
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=21.34 E-value=3.3e+02 Score=31.10 Aligned_cols=36 Identities=28% Similarity=0.084 Sum_probs=27.9
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCccHHHHHHHH
Q 004562 267 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (745)
Q Consensus 267 KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~~p~~L~~~v~ 307 (745)
|--|+|.|-.- -+|||++.|+|..+.++|.|.-.|.
T Consensus 98 Keea~~~~r~~-----~adyilf~d~d~lLts~dTl~llm~ 133 (568)
T KOG4179|consen 98 KEEALNWARSG-----WADYILFKDEDNLLTSGDTLPLLMN 133 (568)
T ss_pred HHHHHHHHHhh-----hcceeEEeehhheeeCCchHhHHHh
Confidence 55677766543 4799999999999998998876654
Done!