BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004564
(745 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 171/265 (64%), Gaps = 5/265 (1%)
Query: 21 GRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL 80
GR+ +++ +G+G+ KTVY+ D +EVAW +L D + + +R E LK L
Sbjct: 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAW--CELQDRKLTKSERQRFKEEAEXLKGL 82
Query: 81 KHKNIMKFYTSWVDT--ANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGL 138
+H NI++FY SW T + I VTE+ TSGTL+ Y + K I+ ++ WCRQIL+GL
Sbjct: 83 QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGL 142
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
+LH+ PP+IHRDLKCDNIF+ G G VKIGDLGLA + R S A +GTPEF APE Y
Sbjct: 143 QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXY 202
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRF 258
EE Y+E VD+Y+FG C LE T EYPYSEC + AQIY++V SG KP S +V PEV+
Sbjct: 203 EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262
Query: 259 VEKCL-ATVSLRLSARELLNDPFLQ 282
+E C+ R S ++LLN F Q
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFFQ 287
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 146/284 (51%), Gaps = 23/284 (8%)
Query: 18 DPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL 77
DP +Y R+ +I G+GAS TVY A D G EVA Q+ L Q P+ E + EI ++
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQ---QQPKK-ELIINEILVM 71
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRG 137
+ K+ NI+ + S++ + V E G+L + ++ + CR+ L+
Sbjct: 72 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQA 128
Query: 138 LLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL--RKSHAAHCVGTPEFMAP 195
L +LHS+ VIHRD+K DNI + G G VK+ D G A + +S + VGTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAP 185
Query: 196 EVY-EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSG----KKPDSLYRV 250
EV +AY VDI+S G+ +EM+ E PY +Y +G + P+ L +
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
Query: 251 KDPEVRRFVEKCL-ATVSLRLSARELLNDPFLQIDDCESNLRSL 293
R F+ +CL V R SA+ELL FL+I S+L L
Sbjct: 246 ----FRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPL 285
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 149/285 (52%), Gaps = 25/285 (8%)
Query: 18 DPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL 77
DP +Y R+ +I G+GAS TVY A D G EVA Q+ L Q P+ E + EI ++
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQ---QQPKK-ELIINEILVM 71
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRG 137
+ K+ NI+ + S++ + V E G+L + ++ + CR+ L+
Sbjct: 72 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQA 128
Query: 138 LLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL--RKSHAAHCVGTPEFMAP 195
L +LHS+ VIHRD+K DNI + G G VK+ D G A + +S + VGTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 185
Query: 196 EVY-EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
EV +AY VDI+S G+ +EM+ E PY +P + + + P+ +++PE
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPE----LQNPE 240
Query: 255 -----VRRFVEKCLAT-VSLRLSARELLNDPFLQIDDCESNLRSL 293
R F+ +CL V R SA+ELL FL+I S+L L
Sbjct: 241 KLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPL 285
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 146/284 (51%), Gaps = 23/284 (8%)
Query: 18 DPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL 77
DP +Y R+ +I G+GAS TVY A D G EVA Q+ L Q P+ E + EI ++
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQ---QQPKK-ELIINEILVM 71
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRG 137
+ K+ NI+ + S++ + V E G+L + ++ + CR+ L+
Sbjct: 72 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQA 128
Query: 138 LLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL--RKSHAAHCVGTPEFMAP 195
L +LHS+ VIHRD+K DNI + G G VK+ D G A + +S + VGTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 196 EVY-EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSG----KKPDSLYRV 250
EV +AY VDI+S G+ +EM+ E PY +Y +G + P+ L +
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
Query: 251 KDPEVRRFVEKCL-ATVSLRLSARELLNDPFLQIDDCESNLRSL 293
R F+ +CL V R SA+ELL FL+I S+L L
Sbjct: 246 ----FRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPL 285
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 149/285 (52%), Gaps = 25/285 (8%)
Query: 18 DPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL 77
DP +Y R+ +I G+GAS TVY A D G EVA Q+ L Q P+ E + EI ++
Sbjct: 18 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQ---QQPKK-ELIINEILVM 72
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRG 137
+ K+ NI+ + S++ + V E G+L + ++ + CR+ L+
Sbjct: 73 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQA 129
Query: 138 LLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL--RKSHAAHCVGTPEFMAP 195
L +LHS+ VIHRD+K DNI + G G VK+ D G A + +S + VGTP +MAP
Sbjct: 130 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 186
Query: 196 EVY-EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
EV +AY VDI+S G+ +EM+ E PY +P + + + P+ +++PE
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPE----LQNPE 241
Query: 255 -----VRRFVEKCLAT-VSLRLSARELLNDPFLQIDDCESNLRSL 293
R F+ +CL V R SA+EL+ FL+I S+L L
Sbjct: 242 KLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTPL 286
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 25/285 (8%)
Query: 18 DPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL 77
DP +Y R+ +I G+GAS TVY A D G EVA Q+ L Q P+ E + EI ++
Sbjct: 18 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQ---QQPKK-ELIINEILVM 72
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRG 137
+ K+ NI+ + S++ + V E G+L + ++ + CR+ L+
Sbjct: 73 RENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQA 129
Query: 138 LLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL--RKSHAAHCVGTPEFMAP 195
L +LHS+ VIHR++K DNI + G G VK+ D G A + +S + VGTP +MAP
Sbjct: 130 LEFLHSNQ--VIHRNIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 186
Query: 196 EVY-EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
EV +AY VDI+S G+ +EM+ E PY +P + + + P+ +++PE
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPE----LQNPE 241
Query: 255 -----VRRFVEKCLAT-VSLRLSARELLNDPFLQIDDCESNLRSL 293
R F+ +CL V R SA+EL+ FL+I S+L L
Sbjct: 242 KLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTPL 286
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 130/243 (53%), Gaps = 18/243 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E +G G+ TV+RA E+ G +VA + DF E + E+ ++K L+H NI+
Sbjct: 43 EKIGAGSFGTVHRA--EWHGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVL 98
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-----RVNIRAVKLWCRQILRGLLYLH 142
F + T N++ VTE + G+L YRL HK +++ R + +G+ YLH
Sbjct: 99 FMGA--VTQPPNLSIVTEYLSRGSL--YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 143 SHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH--AAHCVGTPEFMAPEVY-E 199
+ +PP++HRDLK N+ V+ + VK+ D GL+ + + GTPE+MAPEV +
Sbjct: 155 NRNPPIVHRDLKSPNLLVD-KKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRD 213
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFV 259
E NE D+YSFG+ + E+ T + P+ +PAQ+ V K + R +P+V +
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVAAVGFKCKRLEIPRNLNPQVAAII 272
Query: 260 EKC 262
E C
Sbjct: 273 EGC 275
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 131/243 (53%), Gaps = 18/243 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E +G G+ TV+RA E+ G +VA + DF E + E+ ++K L+H NI+
Sbjct: 43 EKIGAGSFGTVHRA--EWHGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVL 98
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-----RVNIRAVKLWCRQILRGLLYLH 142
F + T N++ VTE + G+L YRL HK +++ R + +G+ YLH
Sbjct: 99 FMGA--VTQPPNLSIVTEYLSRGSL--YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 143 SHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH--AAHCVGTPEFMAPEVY-E 199
+ +PP++HR+LK N+ V+ + VK+ D GL+ + + + GTPE+MAPEV +
Sbjct: 155 NRNPPIVHRNLKSPNLLVD-KKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD 213
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFV 259
E NE D+YSFG+ + E+ T + P+ +PAQ+ V K + R +P+V +
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVAAVGFKCKRLEIPRNLNPQVAAII 272
Query: 260 EKC 262
E C
Sbjct: 273 EGC 275
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 131/249 (52%), Gaps = 18/249 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC--EIHLLKTLKH 82
R + +G+G VYRA +G+ VA +V+++D + + R C EI LLK L H
Sbjct: 35 RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKA---RADCIKEIDLLKQLNH 91
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTL----RQYRLKHKRVNIRAVKLWCRQILRGL 138
N++K+Y S+++ + +N V E+ +G L + ++ + + + R V + Q+ L
Sbjct: 92 PNVIKYYASFIE--DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL-RKSHAAH-CVGTPEFMAPE 196
++HS V+HRD+K N+F+ G VK+GDLGL K+ AAH VGTP +M+PE
Sbjct: 150 EHMHSRR--VMHRDIKPANVFITAT-GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
Query: 197 -VYEEAYNELVDIYSFGMCILEMVTFEYP-YSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
++E YN DI+S G + EM + P Y + + + KK+ P E
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEE 266
Query: 255 VRRFVEKCL 263
+R+ V C+
Sbjct: 267 LRQLVNMCI 275
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 127/265 (47%), Gaps = 19/265 (7%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF 88
+LGKG VY D + +A ++ D S + L+ EI L K LKHKNI+++
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS----QPLHEEIALHKHLKHKNIVQY 84
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHK----RVNIRAVKLWCRQILRGLLYLHSH 144
S+ + N I E G+L L+ K + N + + + +QIL GL YLH
Sbjct: 85 LGSF--SENGFIKIFMEQVPGGSLSAL-LRSKWGPLKDNEQTIGFYTKQILEGLKYLH-- 139
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH--AAHCVGTPEFMAPEVYEE-- 200
D ++HRD+K DN+ +N G +KI D G + L + GT ++MAPE+ ++
Sbjct: 140 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 201 -AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFV 259
Y + DI+S G I+EM T + P+ E P KV K + E + F+
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFI 259
Query: 260 EKCL-ATVSLRLSARELLNDPFLQI 283
KC R A +LL D FL++
Sbjct: 260 LKCFEPDPDKRACANDLLVDEFLKV 284
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 141/270 (52%), Gaps = 19/270 (7%)
Query: 18 DPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL 77
DP Y +I G+G++ V A +++ G +VA VK+ D L+ + E L+ E+ ++
Sbjct: 42 DPRLLLDSYVKI-GEGSTGIVCLAREKHSGRQVA---VKMMD-LRKQQRRELLFNEVVIM 96
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRG 137
+ +H N+++ Y S++ + + E G L + R+N + C +L+
Sbjct: 97 RDYQHFNVVEMYKSYL--VGEELWVLMEFLQGGALTDI-VSQVRLNEEQIATVCEAVLQA 153
Query: 138 LLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS--HAAHCVGTPEFMAP 195
L YLH+ VIHRD+K D+I + + G VK+ D G A + K VGTP +MAP
Sbjct: 154 LAYLHAQG--VIHRDIKSDSILLTLD-GRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAP 210
Query: 196 EVYEEA-YNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKP--DSLYRVKD 252
EV + Y VDI+S G+ ++EMV E PY + P Q K++ P + ++V
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS-PVQAMKRLRDSPPPKLKNSHKV-S 268
Query: 253 PEVRRFVEKCLAT-VSLRLSARELLNDPFL 281
P +R F+E+ L R +A+ELL+ PFL
Sbjct: 269 PVLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 127/266 (47%), Gaps = 23/266 (8%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF 88
+LGKG VY D + +A ++ D S + L+ EI L K LKHKNI+++
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS----QPLHEEIALHKHLKHKNIVQY 70
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHK----RVNIRAVKLWCRQILRGLLYLHSH 144
S+ + N I E G+L L+ K + N + + + +QIL GL YLH
Sbjct: 71 LGSF--SENGFIKIFMEQVPGGSLSAL-LRSKWGPLKDNEQTIGFYTKQILEGLKYLH-- 125
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC----VGTPEFMAPEVYEE 200
D ++HRD+K DN+ +N G +KI D G + R + C GT ++MAPE+ ++
Sbjct: 126 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSK--RLAGINPCTETFTGTLQYMAPEIIDK 183
Query: 201 ---AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRR 257
Y + DI+S G I+EM T + P+ E P KV K + E +
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKA 243
Query: 258 FVEKCL-ATVSLRLSARELLNDPFLQ 282
F+ KC R A +LL D FL+
Sbjct: 244 FILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 134/263 (50%), Gaps = 24/263 (9%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G+G++ V A +++ G +VA VK D L+ + E L+ E+ +++ H N++ Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVA---VKKMD-LRKQQRRELLFNEVVIMRDYHHDNVVDMY 108
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+S++ + V E G L + H R+N + C +LR L YLH+ VI
Sbjct: 109 SSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQIATVCLSVLRALSYLHNQG--VI 163
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS--HAAHCVGTPEFMAPEVYEE-AYNELV 206
HRD+K D+I + + G +K+ D G A + K VGTP +MAPEV Y V
Sbjct: 164 HRDIKSDSILLTSD-GRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 207 DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE-----VRRFVEK 261
DI+S G+ ++EM+ E PY P Q +++ P RVKD +R F++
Sbjct: 223 DIWSLGIMVIEMIDGEPPYFN-EPPLQAMRRIRDSLPP----RVKDLHKVSSVLRGFLDL 277
Query: 262 CLAT-VSLRLSARELLNDPFLQI 283
L S R +A+ELL PFL++
Sbjct: 278 MLVREPSQRATAQELLGHPFLKL 300
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 139/276 (50%), Gaps = 26/276 (9%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG+G+ +VY+A + G VA QV + DL+ + EI +++ +++K
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVK 88
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
+Y S+ N ++ V E +G++ RL++K + + + L+GL YLH
Sbjct: 89 YYGSYFK--NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH--CVGTPEFMAPEVYEE-AYN 203
IHRD+K NI +N +G K+ D G+A L A +GTP +MAPEV +E YN
Sbjct: 147 --IHRDIKAGNILLN-TEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 204 ELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEV-----RRF 258
+ DI+S G+ +EM + PY++ HP + + + P + PE+ F
Sbjct: 204 CVADIWSLGITAIEMAEGKPPYADI-HPMRAIFMIPTNPPPT----FRKPELWSDNFTDF 258
Query: 259 VEKCLA-TVSLRLSARELLNDPFLQIDDCESNLRSL 293
V++CL + R +A +LL PF++ S LR L
Sbjct: 259 VKQCLVKSPEQRATATQLLQHPFVRSAKGVSILRDL 294
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 133/269 (49%), Gaps = 27/269 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG GA VY+A ++ + A K+ D +S E+LE EI +L + H NI+K
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA---AKVID-TKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-VNIRAVKLWCRQILRGLLYLHSHDPPV 148
++ N+ + E G + L+ +R + +++ C+Q L L YLH D +
Sbjct: 101 DAFY--YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH--DNKI 156
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLAA-----ILRKSHAAHCVGTPEFMAPEVY----- 198
IHRDLK NI + G++K+ D G++A I R+ +GTP +MAPEV
Sbjct: 157 IHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRD---SFIGTPYWMAPEVVMCETS 212
Query: 199 -EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVK-DPEVR 256
+ Y+ D++S G+ ++EM E P+ E +P ++ K+ + P + +
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSSNFK 271
Query: 257 RFVEKCL-ATVSLRLSARELLNDPFLQID 284
F++KCL V R + +LL PF+ +D
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 133/269 (49%), Gaps = 27/269 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG GA VY+A ++ + A K+ D +S E+LE EI +L + H NI+K
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA---AKVID-TKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-VNIRAVKLWCRQILRGLLYLHSHDPPV 148
++ N+ + E G + L+ +R + +++ C+Q L L YLH D +
Sbjct: 101 DAFY--YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH--DNKI 156
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLAA-----ILRKSHAAHCVGTPEFMAPEVY----- 198
IHRDLK NI + G++K+ D G++A I R+ +GTP +MAPEV
Sbjct: 157 IHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRD---SFIGTPYWMAPEVVMCETS 212
Query: 199 -EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVK-DPEVR 256
+ Y+ D++S G+ ++EM E P+ E +P ++ K+ + P + +
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSSNFK 271
Query: 257 RFVEKCL-ATVSLRLSARELLNDPFLQID 284
F++KCL V R + +LL PF+ +D
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 133/269 (49%), Gaps = 27/269 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG GA VY+A ++ + A K+ D +S E+LE EI +L + H NI+K
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA---AKVID-TKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-VNIRAVKLWCRQILRGLLYLHSHDPPV 148
++ N+ + E G + L+ +R + +++ C+Q L L YLH D +
Sbjct: 101 DAFY--YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH--DNKI 156
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLAA-----ILRKSHAAHCVGTPEFMAPEVY----- 198
IHRDLK NI + G++K+ D G++A I R+ +GTP +MAPEV
Sbjct: 157 IHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRD---XFIGTPYWMAPEVVMCETS 212
Query: 199 -EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVK-DPEVR 256
+ Y+ D++S G+ ++EM E P+ E +P ++ K+ + P + +
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSSNFK 271
Query: 257 RFVEKCL-ATVSLRLSARELLNDPFLQID 284
F++KCL V R + +LL PF+ +D
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G+G++ V A G VA VK D L+ + E L+ E+ +++ +H+N+++ Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVA---VKKMD-LRKQQRRELLFNEVVIMRDYQHENVVEMY 214
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
S++ + V E G L + H R+N + C +L+ L LH+ VI
Sbjct: 215 NSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 269
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRK--SHAAHCVGTPEFMAPEVYEE-AYNELV 206
HRD+K D+I + + G VK+ D G A + K VGTP +MAPE+ Y V
Sbjct: 270 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 207 DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVK--DPEVRRFVEKCLA 264
DI+S G+ ++EMV E PY P K++ P L + P ++ F+++ L
Sbjct: 329 DIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 386
Query: 265 T-VSLRLSARELLNDPFL 281
+ R +A ELL PFL
Sbjct: 387 RDPAQRATAAELLKHPFL 404
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 136/267 (50%), Gaps = 17/267 (6%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSP-EDLERLYCEIHLLKTLK 81
RYN + LGKG+ V + D E A VK+ + + +D + E+ LLK L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYA---VKVINKASAKNKDTSTILREVELLKKLD 79
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H NIMK + D+++ I V E++T G L +K KR + +Q+ G+ Y+
Sbjct: 80 HPNIMKLFEILEDSSSFYI--VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGE--VKIGDLGLAAILRK-SHAAHCVGTPEFMAPEVY 198
H H+ ++HRDLK +NI + + + +KI D GL+ ++ + +GT ++APEV
Sbjct: 138 HKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL--YRVKDPEVR 256
Y+E D++S G+ + +++ P+ + I K+V +GK L +R + +
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFY-GKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 257 RFVEKCLAT-VSLRLSARELLNDPFLQ 282
+ K L SLR++A + L P++Q
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 144/292 (49%), Gaps = 21/292 (7%)
Query: 14 FVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCE 73
F +DP + + +I GKG+ V++ D VA +K+ D ++ +++E + E
Sbjct: 20 FQSMDPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQE 75
Query: 74 IHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQ 133
I +L + K+Y S++ + + + E G+ L+ ++ + R+
Sbjct: 76 ITVLSQCDSPYVTKYYGSYLK--DTKLWIIMEYLGGGSALDL-LEPGPLDETQIATILRE 132
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH--CVGTPE 191
IL+GL YLHS IHRD+K N+ ++ GEVK+ D G+A L + VGTP
Sbjct: 133 ILKGLDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPF 189
Query: 192 FMAPEVYEE-AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRV 250
+MAPEV ++ AY+ DI+S G+ +E+ E P+SE HP ++ ++ P +L
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVL-FLIPKNNPPTLEGN 247
Query: 251 KDPEVRRFVEKCL-ATVSLRLSARELLNDPFLQIDDCESNLRSLDYSRELDD 301
++ FVE CL S R +A+ELL F+ N + Y EL D
Sbjct: 248 YSKPLKEFVEACLNKEPSFRPTAKELLKHKFIL-----RNAKKTSYLTELID 294
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 21/291 (7%)
Query: 15 VEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEI 74
++ DP + + +I GKG+ V++ D VA +K+ D ++ +++E + EI
Sbjct: 16 LKADPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEI 71
Query: 75 HLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+L + K+Y S++ + + + E G+ L+ ++ + R+I
Sbjct: 72 TVLSQCDSPYVTKYYGSYLK--DTKLWIIMEYLGGGSALDL-LEPGPLDETQIATILREI 128
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH--CVGTPEF 192
L+GL YLHS IHRD+K N+ ++ GEVK+ D G+A L + VGTP +
Sbjct: 129 LKGLDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFW 185
Query: 193 MAPEVYEE-AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVK 251
MAPEV ++ AY+ DI+S G+ +E+ E P+SE HP ++ ++ P +L
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVL-FLIPKNNPPTLEGNY 243
Query: 252 DPEVRRFVEKCL-ATVSLRLSARELLNDPFLQIDDCESNLRSLDYSRELDD 301
++ FVE CL S R +A+ELL F+ N + Y EL D
Sbjct: 244 SKPLKEFVEACLNKEPSFRPTAKELLKHKFIL-----RNAKKTSYLTELID 289
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 131/285 (45%), Gaps = 14/285 (4%)
Query: 6 HLEPDCSEFVEVDPTGRYGRY--NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS 63
HL FV+ RY +LGKG+ V D+ G E A + Q
Sbjct: 31 HLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK 90
Query: 64 PEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVN 123
D E L E+ LLK L H NIMK Y + D V E++T G L + KR +
Sbjct: 91 T-DKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFS 147
Query: 124 IRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV--NGNQGEVKIGDLGLAAILRKS 181
RQ+L G+ Y+H + ++HRDLK +N+ + ++I D GL+ S
Sbjct: 148 EVDAARIIRQVLSGITYMHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 205
Query: 182 HAAH-CVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS 240
+GT ++APEV Y+E D++S G+ + +++ P++ + I KKV
Sbjct: 206 KKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN-GANEYDILKKVEK 264
Query: 241 GKKPDSL--YRVKDPEVRRFVEKCLATV-SLRLSARELLNDPFLQ 282
GK L ++ + + K L V S+R+SAR+ L+ ++Q
Sbjct: 265 GKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 309
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G+G++ V A G VA VK D L+ + E L+ E+ +++ +H+N+++ Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVA---VKKMD-LRKQQRRELLFNEVVIMRDYQHENVVEMY 137
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
S++ + V E G L + H R+N + C +L+ L LH+ VI
Sbjct: 138 NSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 192
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRK--SHAAHCVGTPEFMAPEVYEE-AYNELV 206
HRD+K D+I + + G VK+ D G A + K VGTP +MAPE+ Y V
Sbjct: 193 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 207 DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVK--DPEVRRFVEKCLA 264
DI+S G+ ++EMV E PY P K++ P L + P ++ F+++ L
Sbjct: 252 DIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 309
Query: 265 T-VSLRLSARELLNDPFL 281
+ R +A ELL PFL
Sbjct: 310 RDPAQRATAAELLKHPFL 327
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 131/285 (45%), Gaps = 14/285 (4%)
Query: 6 HLEPDCSEFVEVDPTGRYGRY--NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS 63
HL FV+ RY +LGKG+ V D+ G E A + Q
Sbjct: 32 HLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK 91
Query: 64 PEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVN 123
D E L E+ LLK L H NIMK Y + D V E++T G L + KR +
Sbjct: 92 T-DKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFS 148
Query: 124 IRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV--NGNQGEVKIGDLGLAAILRKS 181
RQ+L G+ Y+H + ++HRDLK +N+ + ++I D GL+ S
Sbjct: 149 EVDAARIIRQVLSGITYMHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 206
Query: 182 HAAH-CVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS 240
+GT ++APEV Y+E D++S G+ + +++ P++ + I KKV
Sbjct: 207 KKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN-GANEYDILKKVEK 265
Query: 241 GKKPDSL--YRVKDPEVRRFVEKCLATV-SLRLSARELLNDPFLQ 282
GK L ++ + + K L V S+R+SAR+ L+ ++Q
Sbjct: 266 GKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 310
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 132/287 (45%), Gaps = 14/287 (4%)
Query: 4 LTHLEPDCSEFVEVDPTGRYGRY--NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFL 61
+ HL FV+ RY +LGKG+ V D+ G E A +
Sbjct: 6 MDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK 65
Query: 62 QSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR 121
Q D E L E+ LLK L H NIMK Y + D V E++T G L + KR
Sbjct: 66 QKT-DKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKR 122
Query: 122 VNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV--NGNQGEVKIGDLGLAAILR 179
+ RQ+L G+ Y+H + ++HRDLK +N+ + ++I D GL+
Sbjct: 123 FSEVDAARIIRQVLSGITYMHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Query: 180 KSHAAH-CVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV 238
S +GT ++APEV Y+E D++S G+ + +++ P++ + I KKV
Sbjct: 181 ASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN-GANEYDILKKV 239
Query: 239 VSGKKPDSL--YRVKDPEVRRFVEKCLATV-SLRLSARELLNDPFLQ 282
GK L ++ + + K L V S+R+SAR+ L+ ++Q
Sbjct: 240 EKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 286
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 18/258 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G+G++ V A G VA VK D L+ + E L+ E+ +++ +H+N+++ Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVA---VKKMD-LRKQQRRELLFNEVVIMRDYQHENVVEMY 94
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
S++ + V E G L + H R+N + C +L+ L LH+ VI
Sbjct: 95 NSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 149
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS--HAAHCVGTPEFMAPEVYEE-AYNELV 206
HRD+K D+I + + G VK+ D G A + K VGTP +MAPE+ Y V
Sbjct: 150 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 207 DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKP--DSLYRVKDPEVRRFVEKCLA 264
DI+S G+ ++EMV E PY P + K + P +L++V P ++ F+++ L
Sbjct: 209 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKV-SPSLKGFLDRLLV 266
Query: 265 T-VSLRLSARELLNDPFL 281
+ R +A ELL PFL
Sbjct: 267 RDPAQRATAAELLKHPFL 284
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 21/291 (7%)
Query: 15 VEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEI 74
+ +DP + + +I GKG+ V++ D VA +K+ D ++ +++E + EI
Sbjct: 1 MSLDPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEI 56
Query: 75 HLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+L + K+Y S++ + + + E G+ L+ ++ + R+I
Sbjct: 57 TVLSQCDSPYVTKYYGSYLK--DTKLWIIMEYLGGGSALDL-LEPGPLDETQIATILREI 113
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH--CVGTPEF 192
L+GL YLHS IHRD+K N+ ++ GEVK+ D G+A L + VGTP +
Sbjct: 114 LKGLDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFW 170
Query: 193 MAPEVYEE-AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVK 251
MAPEV ++ AY+ DI+S G+ +E+ E P+SE HP ++ ++ P +L
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVL-FLIPKNNPPTLEGNY 228
Query: 252 DPEVRRFVEKCL-ATVSLRLSARELLNDPFLQIDDCESNLRSLDYSRELDD 301
++ FVE CL S R +A+ELL F+ N + Y EL D
Sbjct: 229 SKPLKEFVEACLNKEPSFRPTAKELLKHKFIL-----RNAKKTSYLTELID 274
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 21/291 (7%)
Query: 15 VEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEI 74
+ +DP + + +I GKG+ V++ D VA +K+ D ++ +++E + EI
Sbjct: 1 MSLDPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEI 56
Query: 75 HLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+L + K+Y S++ + + + E G+ L+ ++ + R+I
Sbjct: 57 TVLSQCDSPYVTKYYGSYLK--DTKLWIIMEYLGGGSALDL-LEPGPLDETQIATILREI 113
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH--CVGTPEF 192
L+GL YLHS IHRD+K N+ ++ GEVK+ D G+A L + VGTP +
Sbjct: 114 LKGLDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFW 170
Query: 193 MAPEVYEE-AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVK 251
MAPEV ++ AY+ DI+S G+ +E+ E P+SE HP ++ ++ P +L
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVL-FLIPKNNPPTLEGNY 228
Query: 252 DPEVRRFVEKCL-ATVSLRLSARELLNDPFLQIDDCESNLRSLDYSRELDD 301
++ FVE CL S R +A+ELL F+ N + Y EL D
Sbjct: 229 SKPLKEFVEACLNKEPSFRPTAKELLKHKFIL-----RNAKKTSYLTELID 274
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 18/258 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G+G++ V A G VA VK D L+ + E L+ E+ +++ +H+N+++ Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVA---VKKMD-LRKQQRRELLFNEVVIMRDYQHENVVEMY 92
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
S++ + V E G L + H R+N + C +L+ L LH+ VI
Sbjct: 93 NSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 147
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS--HAAHCVGTPEFMAPEVYEE-AYNELV 206
HRD+K D+I + + G VK+ D G A + K VGTP +MAPE+ Y V
Sbjct: 148 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 207 DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKP--DSLYRVKDPEVRRFVEKCLA 264
DI+S G+ ++EMV E PY P + K + P +L++V P ++ F+++ L
Sbjct: 207 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKV-SPSLKGFLDRLLV 264
Query: 265 T-VSLRLSARELLNDPFL 281
+ R +A ELL PFL
Sbjct: 265 RDPAQRATAAELLKHPFL 282
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 18/258 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G+G++ V A G VA VK D L+ + E L+ E+ +++ +H+N+++ Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVA---VKKMD-LRKQQRRELLFNEVVIMRDYQHENVVEMY 87
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
S++ + V E G L + H R+N + C +L+ L LH+ VI
Sbjct: 88 NSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 142
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS--HAAHCVGTPEFMAPEVYEE-AYNELV 206
HRD+K D+I + + G VK+ D G A + K VGTP +MAPE+ Y V
Sbjct: 143 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 207 DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKP--DSLYRVKDPEVRRFVEKCLA 264
DI+S G+ ++EMV E PY P + K + P +L++V P ++ F+++ L
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKV-SPSLKGFLDRLLV 259
Query: 265 T-VSLRLSARELLNDPFL 281
+ R +A ELL PFL
Sbjct: 260 RDPAQRATAAELLKHPFL 277
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 136/267 (50%), Gaps = 17/267 (6%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSP-EDLERLYCEIHLLKTLK 81
RYN + LGKG+ V + D E A VK+ + + +D + E+ LLK L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYA---VKVINKASAKNKDTSTILREVELLKKLD 79
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H NIMK + D+++ I V E++T G L +K KR + +Q+ G+ Y+
Sbjct: 80 HPNIMKLFEILEDSSSFYI--VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGE--VKIGDLGLAAILRK-SHAAHCVGTPEFMAPEVY 198
H H+ ++HRDLK +NI + + + +KI D GL+ ++ + +GT ++APEV
Sbjct: 138 HKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL--YRVKDPEVR 256
Y+E D++S G+ + +++ P+ + I K+V +GK L +R + +
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFY-GKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 257 RFVEKCLAT-VSLRLSARELLNDPFLQ 282
+ K L SLR++A + L P++Q
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 136/267 (50%), Gaps = 17/267 (6%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSP-EDLERLYCEIHLLKTLK 81
RYN + LGKG+ V + D E A VK+ + + +D + E+ LLK L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYA---VKVINKASAKNKDTSTILREVELLKKLD 79
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H NIMK + D+++ I V E++T G L +K KR + +Q+ G+ Y+
Sbjct: 80 HPNIMKLFEILEDSSSFYI--VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGE--VKIGDLGLAAILRK-SHAAHCVGTPEFMAPEVY 198
H H+ ++HRDLK +NI + + + +KI D GL+ ++ + +GT ++APEV
Sbjct: 138 HKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL--YRVKDPEVR 256
Y+E D++S G+ + +++ P+ + I K+V +GK L +R + +
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFY-GKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 257 RFVEKCLAT-VSLRLSARELLNDPFLQ 282
+ K L SLR++A + L P++Q
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 140/282 (49%), Gaps = 16/282 (5%)
Query: 4 LTHLEPDCSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS 63
+ HL ++ VDP + + + I GKG+ VY+ D + VA +K+ D ++
Sbjct: 2 MAHLRGFANQHSRVDPEELFTKLDRI-GKGSFGEVYKGIDNHTKEVVA---IKIIDLEEA 57
Query: 64 PEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVN 123
+++E + EI +L I +++ S++ + I + E G+ LK +
Sbjct: 58 EDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWI--IMEYLGGGSALDL-LKPGPLE 114
Query: 124 IRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA 183
+ R+IL+GL YLHS IHRD+K N+ ++ QG+VK+ D G+A L +
Sbjct: 115 ETYIATILREILKGLDYLHSERK--IHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQI 171
Query: 184 AH--CVGTPEFMAPEVYEE-AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS 240
VGTP +MAPEV ++ AY+ DI+S G+ +E+ E P S+ HP ++ ++
Sbjct: 172 KRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL-HPMRVL-FLIP 229
Query: 241 GKKPDSLYRVKDPEVRRFVEKCL-ATVSLRLSARELLNDPFL 281
P +L + FVE CL R +A+ELL F+
Sbjct: 230 KNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFI 271
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 18/258 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G+G++ V A G VA VK D L+ + E L+ E+ +++ +H+N+++ Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVA---VKKMD-LRKQQRRELLFNEVVIMRDYQHENVVEMY 83
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
S++ + V E G L + H R+N + C +L+ L LH+ VI
Sbjct: 84 NSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 138
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS--HAAHCVGTPEFMAPEVYEE-AYNELV 206
HRD+K D+I + + G VK+ D G A + K VGTP +MAPE+ Y V
Sbjct: 139 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 207 DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKP--DSLYRVKDPEVRRFVEKCLA 264
DI+S G+ ++EMV E PY P + K + P +L++V P ++ F+++ L
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKV-SPSLKGFLDRLLV 255
Query: 265 T-VSLRLSARELLNDPFL 281
+ R +A ELL PFL
Sbjct: 256 RDPAQRATAAELLKHPFL 273
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 126/255 (49%), Gaps = 22/255 (8%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFL---QSPEDLERLYCEIHLLKTLKHKNIM 86
LG G TVY A D I+VA + F+ + E L+R E+H L H+NI+
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAI----FIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
VD + V E TL +Y H +++ + QIL G+ H+HD
Sbjct: 75 SMID--VDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIK--HAHDM 130
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK---SHAAHCVGTPEFMAPEVYE-EAY 202
++HRD+K NI ++ N+ +KI D G+A L + + H +GT ++ +PE + EA
Sbjct: 131 RIVHRDIKPQNILIDSNK-TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEAT 189
Query: 203 NELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKC 262
+E DIYS G+ + EM+ E P++ T + K + DS+ V +VR+ + +
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHI-----QDSVPNVT-TDVRKDIPQS 243
Query: 263 LATVSLRLSARELLN 277
L+ V LR + ++ N
Sbjct: 244 LSNVILRATEKDKAN 258
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 135/272 (49%), Gaps = 23/272 (8%)
Query: 26 YNEILGK-GASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
+ EI+G+ G VY+A ++ + A K+ D +S E+LE EI +L + H N
Sbjct: 13 FWEIIGELGDFGKVYKAQNKETSVLAA---AKVID-TKSEEELEDYMVEIDILASCDHPN 68
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-VNIRAVKLWCRQILRGLLYLHS 143
I+K ++ N+ + E G + L+ +R + +++ C+Q L L YLH
Sbjct: 69 IVKLLDAFY--YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH- 125
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH---CVGTPEFMAPEVY-- 198
D +IHRDLK NI + G++K+ D G++A ++ +GTP +MAPEV
Sbjct: 126 -DNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMC 183
Query: 199 ----EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVK-DP 253
+ Y+ D++S G+ ++EM E P+ E +P ++ K+ + P +
Sbjct: 184 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSS 242
Query: 254 EVRRFVEKCL-ATVSLRLSARELLNDPFLQID 284
+ F++KCL V R + +LL PF+ +D
Sbjct: 243 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 274
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 124/260 (47%), Gaps = 12/260 (4%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF 88
+LGKG+ V D+ G E A + Q D E L E+ LLK L H NIMK
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT-DKESLLREVQLLKQLDHPNIMKL 97
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPV 148
Y + D V E++T G L + KR + RQ+L G+ Y+H + +
Sbjct: 98 YEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN--KI 153
Query: 149 IHRDLKCDNIFV--NGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAPEVYEEAYNEL 205
+HRDLK +N+ + ++I D GL+ S +GT ++APEV Y+E
Sbjct: 154 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEK 213
Query: 206 VDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL--YRVKDPEVRRFVEKCL 263
D++S G+ + +++ P++ + I KKV GK L ++ + + K L
Sbjct: 214 CDVWSTGVILYILLSGCPPFN-GANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 272
Query: 264 ATV-SLRLSARELLNDPFLQ 282
V S+R+SAR+ L+ ++Q
Sbjct: 273 TYVPSMRISARDALDHEWIQ 292
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 130/267 (48%), Gaps = 15/267 (5%)
Query: 22 RYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
RY R + LG GA V D+ G E A +K + + + L E+ +LK L
Sbjct: 5 RYQRVKK-LGSGAYGEVLLCKDKLTGAERAIKIIK-KSSVTTTSNSGALLDEVAVLKQLD 62
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H NIMK Y + D RN V E++ G L + ++ + + +Q+L G YL
Sbjct: 63 HPNIMKLYEFFED--KRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 120
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGE--VKIGDLGLAAILR-KSHAAHCVGTPEFMAPEVY 198
H H+ ++HRDLK +N+ + + +KI D GL+A +GT ++APEV
Sbjct: 121 HKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 178
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK---KPDSLYRVKDPEV 255
+ Y+E D++S G+ IL ++ YP +I K+V GK P +V D E
Sbjct: 179 RKKYDEKCDVWSCGV-ILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD-EA 236
Query: 256 RRFVEKCLA-TVSLRLSARELLNDPFL 281
++ V+ L S R+SA E LN P++
Sbjct: 237 KQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 137/289 (47%), Gaps = 22/289 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIH 75
++DP + E LG GA VY+A ++ G A ++ +S E+LE EI
Sbjct: 14 DLDPNEVWEIVGE-LGDGAFGKVYKAKNKETGALAAAKVIET----KSEEELEDYIVEIE 68
Query: 76 LLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-VNIRAVKLWCRQI 134
+L T H I+K ++ + + + E G + L+ R + +++ CRQ+
Sbjct: 69 ILATCDHPYIVKLLGAYYH--DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQM 126
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH--CVGTPEF 192
L L +LHS +IHRDLK N+ + +G++++ D G++A K+ +GTP +
Sbjct: 127 LEALNFLHSKR--IIHRDLKAGNVLMT-LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYW 183
Query: 193 MAPEVY------EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDS 246
MAPEV + Y+ DI+S G+ ++EM E P+ E +P ++ K+ P
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSDPPTL 242
Query: 247 LYRVK-DPEVRRFVEKCL-ATVSLRLSARELLNDPFLQIDDCESNLRSL 293
L K E R F++ L R SA +LL PF+ LR L
Sbjct: 243 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALREL 291
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 137/289 (47%), Gaps = 22/289 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIH 75
++DP + E LG GA VY+A ++ G A ++ +S E+LE EI
Sbjct: 6 DLDPNEVWEIVGE-LGDGAFGKVYKAKNKETGALAAAKVIET----KSEEELEDYIVEIE 60
Query: 76 LLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-VNIRAVKLWCRQI 134
+L T H I+K ++ + + + E G + L+ R + +++ CRQ+
Sbjct: 61 ILATCDHPYIVKLLGAYYH--DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQM 118
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH--CVGTPEF 192
L L +LHS +IHRDLK N+ + +G++++ D G++A K+ +GTP +
Sbjct: 119 LEALNFLHSKR--IIHRDLKAGNVLMT-LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYW 175
Query: 193 MAPEVY------EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDS 246
MAPEV + Y+ DI+S G+ ++EM E P+ E +P ++ K+ P
Sbjct: 176 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSDPPTL 234
Query: 247 LYRVK-DPEVRRFVEKCL-ATVSLRLSARELLNDPFLQIDDCESNLRSL 293
L K E R F++ L R SA +LL PF+ LR L
Sbjct: 235 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALREL 283
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 23/264 (8%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG GA V D+ +E A ++ S +L E+ +LK L H NIMK Y
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNS--KLLEEVAVLKLLDHPNIMKLY 102
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D RN V E + G L + + N + +Q+L G+ YLH H+ ++
Sbjct: 103 DFFED--KRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN--IV 158
Query: 150 HRDLKCDNIFVNGNQGE--VKIGDLGLAAILR-KSHAAHCVGTPEFMAPEVYEEAYNELV 206
HRDLK +N+ + + + +KI D GL+A+ + +GT ++APEV + Y+E
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKC 218
Query: 207 DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVE--KCLA 264
D++S G+ IL ++ YP +I +KV GK Y PE + E K L
Sbjct: 219 DVWSIGV-ILFILLAGYPPFGGQTDQEILRKVEKGK-----YTFDSPEWKNVSEGAKDLI 272
Query: 265 TVSL------RLSARELLNDPFLQ 282
L R+SA++ L P+++
Sbjct: 273 KQMLQFDSQRRISAQQALEHPWIK 296
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 35/282 (12%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
E++G GA+ V A+ + +VA ++ L S ++L + EI + H NI+
Sbjct: 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK---EIQAMSQCHHPNIV 76
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQY------RLKHKR--VNIRAVKLWCRQILRGL 138
+YTS+V + V ++ + G++ + +HK ++ + R++L GL
Sbjct: 77 SYYTSFV--VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL-------RKSHAAHCVGTPE 191
YLH + IHRD+K NI + G G V+I D G++A L R VGTP
Sbjct: 135 EYLHKNGQ--IHRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 192 FMAPEVYEE--AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYR 249
+MAPEV E+ Y+ DI+SFG+ +E+ T PY + P ++ + P
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDPPSLETG 250
Query: 250 VKDPEV--------RRFVEKCLAT-VSLRLSARELLNDPFLQ 282
V+D E+ R+ + CL R +A ELL F Q
Sbjct: 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 35/282 (12%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
E++G GA+ V A+ + +VA ++ L S ++L + EI + H NI+
Sbjct: 15 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK---EIQAMSQCHHPNIV 71
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQY------RLKHKR--VNIRAVKLWCRQILRGL 138
+YTS+V + V ++ + G++ + +HK ++ + R++L GL
Sbjct: 72 SYYTSFV--VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL-------RKSHAAHCVGTPE 191
YLH + IHRD+K NI + G G V+I D G++A L R VGTP
Sbjct: 130 EYLHKNGQ--IHRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 192 FMAPEVYEE--AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYR 249
+MAPEV E+ Y+ DI+SFG+ +E+ T PY + P ++ + P
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDPPSLETG 245
Query: 250 VKDPEV--------RRFVEKCLAT-VSLRLSARELLNDPFLQ 282
V+D E+ R+ + CL R +A ELL F Q
Sbjct: 246 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 54/293 (18%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF 88
+LG+GA V +A + + A +++ + E L + E+ LL +L H+ ++++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR-----HTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 89 YTSWVDTAN----------RNINFV-TEMFTSGTLRQYRLKH-KRVNIRAVKLW--CRQI 134
Y +W++ N ++ F+ E +GTL Y L H + +N + + W RQI
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL--YDLIHSENLNQQRDEYWRLFRQI 125
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS------------- 181
L L Y+HS +IHRDLK NIF++ ++ VKIGD GLA + +S
Sbjct: 126 LEALSYIHSQG--IIHRDLKPMNIFIDESRN-VKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 182 ---HAAHCVGTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYK 236
+ +GT ++A EV + YNE +D+YS G+ EM+ YP+S I K
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILK 239
Query: 237 KV--VSGKKP----DSLYRVKDPEVRRFVEKCLATVSLRLSARELLNDPFLQI 283
K+ VS + P D+ +V+ +R ++ + R AR LLN +L +
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDH---DPNKRPGARTLLNSGWLPV 289
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 14/285 (4%)
Query: 6 HLEPDCSEFVEVDPTGRYGRY--NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS 63
HL FV+ RY +LGKG+ V D+ G E A + Q
Sbjct: 8 HLHATPGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK 67
Query: 64 PEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVN 123
D E L E+ LLK L H NI K Y + D V E++T G L + KR +
Sbjct: 68 T-DKESLLREVQLLKQLDHPNIXKLYEFFEDKGY--FYLVGEVYTGGELFDEIISRKRFS 124
Query: 124 IRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV--NGNQGEVKIGDLGLAAILRKS 181
RQ+L G+ Y H + ++HRDLK +N+ + ++I D GL+ S
Sbjct: 125 EVDAARIIRQVLSGITYXHKN--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 182 HAAH-CVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS 240
+GT ++APEV Y+E D++S G+ + +++ P++ + I KKV
Sbjct: 183 KKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN-GANEYDILKKVEK 241
Query: 241 GKKPDSL--YRVKDPEVRRFVEKCLATV-SLRLSARELLNDPFLQ 282
GK L ++ + + K L V S R+SAR+ L+ ++Q
Sbjct: 242 GKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQ 286
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 130/267 (48%), Gaps = 15/267 (5%)
Query: 22 RYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
RY R + LG GA V D+ G E A +K + + + L E+ +LK L
Sbjct: 22 RYQRVKK-LGSGAYGEVLLCKDKLTGAERAIKIIK-KSSVTTTSNSGALLDEVAVLKQLD 79
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H NIMK Y + D RN V E++ G L + ++ + + +Q+L G YL
Sbjct: 80 HPNIMKLYEFFED--KRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 137
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGE--VKIGDLGLAAILR-KSHAAHCVGTPEFMAPEVY 198
H H+ ++HRDLK +N+ + + +KI D GL+A +GT ++APEV
Sbjct: 138 HKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 195
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK---KPDSLYRVKDPEV 255
+ Y+E D++S G+ IL ++ YP +I K+V GK P +V D E
Sbjct: 196 RKKYDEKCDVWSCGV-ILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD-EA 253
Query: 256 RRFVEKCLA-TVSLRLSARELLNDPFL 281
++ V+ L S R+SA E LN P++
Sbjct: 254 KQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 138/288 (47%), Gaps = 21/288 (7%)
Query: 5 THLEPDCSEFVE-----VDP--TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKL 57
H++P + E VDP RY R LGKG Y D + EV +V
Sbjct: 19 AHVDPKSAPLKEIPDVLVDPRTMKRYMR-GRFLGKGGFAKCYEITD-MDTKEVFAGKVVP 76
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL 117
L P E++ EI + K+L + +++ F+ + D + + V E+ +L +
Sbjct: 77 KSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHK 134
Query: 118 KHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAI 177
+ K V + + RQ ++G+ YLH++ VIHRDLK N+F+N + +VKIGD GLA
Sbjct: 135 RRKAVTEPEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATK 191
Query: 178 LR--KSHAAHCVGTPEFMAPEVY-EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQI 234
+ GTP ++APEV ++ ++ VDI+S G CIL + P E + +
Sbjct: 192 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLG-CILYTLLVGKPPFETSCLKET 250
Query: 235 YKKVVSGKKPDSLYRVKDPEVRRFVEKCL-ATVSLRLSARELLNDPFL 281
Y ++ K S+ R +P + + L A +LR S ELL D F
Sbjct: 251 YIRI--KKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 138/288 (47%), Gaps = 21/288 (7%)
Query: 5 THLEPDCSEFVE-----VDP--TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKL 57
H++P + E VDP RY R LGKG Y D + EV +V
Sbjct: 19 AHVDPKSAPLKEIPDVLVDPRTMKRYMR-GRFLGKGGFAKCYEITD-MDTKEVFAGKVVP 76
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL 117
L P E++ EI + K+L + +++ F+ + D + + V E+ +L +
Sbjct: 77 KSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHK 134
Query: 118 KHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAI 177
+ K V + + RQ ++G+ YLH++ VIHRDLK N+F+N + +VKIGD GLA
Sbjct: 135 RRKAVTEPEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATK 191
Query: 178 LR--KSHAAHCVGTPEFMAPEVY-EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQI 234
+ GTP ++APEV ++ ++ VDI+S G CIL + P E + +
Sbjct: 192 IEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLG-CILYTLLVGKPPFETSCLKET 250
Query: 235 YKKVVSGKKPDSLYRVKDPEVRRFVEKCL-ATVSLRLSARELLNDPFL 281
Y ++ K S+ R +P + + L A +LR S ELL D F
Sbjct: 251 YIRI--KKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 138/288 (47%), Gaps = 21/288 (7%)
Query: 5 THLEPDCSEFVE-----VDP--TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKL 57
H++P + E VDP RY R LGKG Y D + EV +V
Sbjct: 19 AHVDPKSAPLKEIPDVLVDPRTMKRYMR-GRFLGKGGFAKCYEITD-MDTKEVFAGKVVP 76
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL 117
L P E++ EI + K+L + +++ F+ + D + + V E+ +L +
Sbjct: 77 KSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHK 134
Query: 118 KHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAI 177
+ K V + + RQ ++G+ YLH++ VIHRDLK N+F+N + +VKIGD GLA
Sbjct: 135 RRKAVTEPEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATK 191
Query: 178 LR--KSHAAHCVGTPEFMAPEVY-EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQI 234
+ GTP ++APEV ++ ++ VDI+S G CIL + P E + +
Sbjct: 192 IEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLG-CILYTLLVGKPPFETSCLKET 250
Query: 235 YKKVVSGKKPDSLYRVKDPEVRRFVEKCL-ATVSLRLSARELLNDPFL 281
Y ++ K S+ R +P + + L A +LR S ELL D F
Sbjct: 251 YIRI--KKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 136/278 (48%), Gaps = 20/278 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E +GKG+ V++ D VA +K+ D ++ +++E + EI +L + K
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVA---IKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTK 85
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPP 147
+Y S++ + I + E G+ L+ + + ++IL+GL YLHS
Sbjct: 86 YYGSYLKGSKLWI--IMEYLGGGSALDL-LRAGPFDEFQIATMLKEILKGLDYLHSEKK- 141
Query: 148 VIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH--CVGTPEFMAPEVYEE-AYNE 204
IHRD+K N+ ++ QG+VK+ D G+A L + VGTP +MAPEV ++ AY+
Sbjct: 142 -IHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDS 199
Query: 205 LVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCL- 263
DI+S G+ +E+ E P S+ HP ++ ++ P +L + F++ CL
Sbjct: 200 KADIWSLGITAIELAKGEPPNSDM-HPMRVL-FLIPKNNPPTLVGDFTKSFKEFIDACLN 257
Query: 264 ATVSLRLSARELLNDPFLQIDDCESNLRSLDYSRELDD 301
S R +A+ELL F+ N + Y EL D
Sbjct: 258 KDPSFRPTAKELLKHKFIV-----KNSKKTSYLTELID 290
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 132/264 (50%), Gaps = 18/264 (6%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYD--FLQSPEDLERLYCEIHLLKTLKH 82
+ +LGKG+ VYRA + G+EVA +K+ D + ++R+ E+ + LKH
Sbjct: 14 KVGNLLGKGSFAGVYRAESIHTGLEVA---IKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWCRQILRGLLYL 141
+I++ Y + D+ + V EM +G + +Y + + K + + + QI+ G+LYL
Sbjct: 71 PSILELYNYFEDS--NYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH--CVGTPEFMAPEVYE 199
HSH ++HRDL N+ + N +KI D GLA L+ H H GTP +++PE+
Sbjct: 129 HSHG--ILHRDLTLSNLLLTRNM-NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT 185
Query: 200 EAYNEL-VDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRF 258
+ + L D++S G ++ P+ T + K V++ + S + E +
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSI---EAKDL 242
Query: 259 VEKCL-ATVSLRLSARELLNDPFL 281
+ + L + RLS +L+ PF+
Sbjct: 243 IHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 133/273 (48%), Gaps = 16/273 (5%)
Query: 15 VEVDP--TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC 72
V VDP RY R LGKG Y D + EV +V L P E++
Sbjct: 18 VLVDPRTMKRYMR-GRFLGKGGFAKCYEITD-MDTKEVFAGKVVPKSMLLKPHQKEKMST 75
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCR 132
EI + K+L + +++ F+ + D + + V E+ +L + + K V + + R
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 133
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILR--KSHAAHCVGTP 190
Q ++G+ YLH++ VIHRDLK N+F+N + +VKIGD GLA + GTP
Sbjct: 134 QTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLCGTP 190
Query: 191 EFMAPEVY-EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYR 249
++APEV ++ ++ VDI+S G CIL + P E + + Y ++ K S+ R
Sbjct: 191 NYIAPEVLCKKGHSFEVDIWSLG-CILYTLLVGKPPFETSCLKETYIRI--KKNEYSVPR 247
Query: 250 VKDPEVRRFVEKCL-ATVSLRLSARELLNDPFL 281
+P + + L A +LR S ELL D F
Sbjct: 248 HINPVASALIRRMLHADPTLRPSVAELLTDEFF 280
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 27/248 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHKNIMKF 88
+G G+ TVY+ ++ G +VA VK+ + +P+ L+ E+ +L+ +H NI+ F
Sbjct: 20 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 73
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW--CRQILRGLLYLHSHDP 146
+ + VT+ + G+ + L KL RQ RG+ YLH+
Sbjct: 74 MGY---STKPQLAIVTQ-WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS- 128
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH----CVGTPEFMAPEVYE--- 199
+IHRDLK +NIF++ + VKIGD GLA + + +H G+ +MAPEV
Sbjct: 129 -IIHRDLKSNNIFLHEDN-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 200 -EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKD---PEV 255
Y+ D+Y+FG+ + E++T + PYS + QI + V G L +V+ +
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 246
Query: 256 RRFVEKCL 263
+R + +CL
Sbjct: 247 KRLMAECL 254
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 128/278 (46%), Gaps = 38/278 (13%)
Query: 20 TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKT 79
TG YGR +I K K + W ++ ++ + + L E++LL+
Sbjct: 16 TGSYGRCQKIRRKSDGKIL------------VWKELDYGSMTEAEKQM--LVSEVNLLRE 61
Query: 80 LKHKNIMKFYTSWVDTANRNINFVTE---------MFTSGTLRQYRLKHKRVNIRAVKLW 130
LKH NI+++Y +D N + V E + T GT + L + V +R +
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV-LRVMT-- 118
Query: 131 CRQILRGLLYLHSHDP---PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILR--KSHAAH 185
Q+ L H V+HRDLK N+F++G Q VK+GD GLA IL S A
Sbjct: 119 --QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNHDTSFAKA 175
Query: 186 CVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKP 244
VGTP +M+PE + +YNE DI+S G + E+ P++ + ++ K+ GK
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-KELAGKIREGKFR 234
Query: 245 DSLYRVKDPEVRRFVEKCLATVSL-RLSARELLNDPFL 281
YR D E+ + + L R S E+L +P +
Sbjct: 235 RIPYRYSD-ELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 135/291 (46%), Gaps = 28/291 (9%)
Query: 18 DPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL 77
DP G + E++G G VY+ G A +K+ D E E + EI++L
Sbjct: 21 DPAGIF-ELVELVGNGTYGQVYKGRHVKTGQLAA---IKVMDVTGDEE--EEIKQEINML 74
Query: 78 KTLKH-KNIMKFYTSWVDT----ANRNINFVTEMFTSGTLRQYRLKHKRVNI---RAVKL 129
K H +NI +Y +++ + + V E +G++ +K+ + N +
Sbjct: 75 KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL-IKNTKGNTLKEEWIAY 133
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH--CV 187
CR+ILRGL +LH H VIHRD+K N+ + N EVK+ D G++A L ++ +
Sbjct: 134 ICREILRGLSHLHQHK--VIHRDIKGQNVLLTEN-AEVKLVDFGVSAQLDRTVGRRNTFI 190
Query: 188 GTPEFMAPEVY------EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSG 241
GTP +MAPEV + Y+ D++S G+ +EM P + HP + +
Sbjct: 191 GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD-MHPMRALFLIPRN 249
Query: 242 KKPDSLYRVKDPEVRRFVEKCLA-TVSLRLSARELLNDPFLQIDDCESNLR 291
P + + + F+E CL S R + +L+ PF++ E +R
Sbjct: 250 PAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVR 300
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 124/273 (45%), Gaps = 28/273 (10%)
Query: 20 TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKT 79
TG YGR +I K K + W ++ ++ + + L E++LL+
Sbjct: 16 TGSYGRCQKIRRKSDGKIL------------VWKELDYGSMTEAEKQM--LVSEVNLLRE 61
Query: 80 LKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR----VNIRAVKLWCRQIL 135
LKH NI+++Y +D N + V E G L K + ++ V Q+
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121
Query: 136 RGLLYLHSHDP---PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILR--KSHAAHCVGTP 190
L H V+HRDLK N+F++G Q VK+GD GLA IL S A VGTP
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNHDTSFAKTFVGTP 180
Query: 191 EFMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYR 249
+M+PE + +YNE DI+S G + E+ P++ + ++ K+ GK YR
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-KELAGKIREGKFRRIPYR 239
Query: 250 VKDPEVRRFVEKCLATVSL-RLSARELLNDPFL 281
D E+ + + L R S E+L +P +
Sbjct: 240 YSD-ELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 137/291 (47%), Gaps = 50/291 (17%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF 88
+LG+GA V +A + + A +++ + E L + E+ LL +L H+ ++++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR-----HTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 89 YTSWVDTAN---------RNINFVTEMFTSGTLRQYRLKH-KRVNIRAVKLW--CRQILR 136
Y +W++ N + +M Y L H + +N + + W RQIL
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS--------------- 181
L Y+HS +IHRDLK NIF++ ++ VKIGD GLA + +S
Sbjct: 128 ALSYIHSQG--IIHRDLKPMNIFIDESRN-VKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 182 -HAAHCVGTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV 238
+ +GT ++A EV + YNE +D+YS G+ EM+ YP+S I KK+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKL 241
Query: 239 --VSGKKP----DSLYRVKDPEVRRFVEKCLATVSLRLSARELLNDPFLQI 283
VS + P D+ +V+ +R ++ + R AR LLN +L +
Sbjct: 242 RSVSIEFPPDFDDNKMKVEKKIIRLLIDH---DPNKRPGARTLLNSGWLPV 289
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 146/310 (47%), Gaps = 29/310 (9%)
Query: 8 EPDCSE-FVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPED 66
+PD +E F + DP + EI G G+ VY A D VA ++ Y QS E
Sbjct: 40 DPDVAELFFKDDPEKLFSDLREI-GHGSFGAVYFARDVRNSEVVAIKKMS-YSGKQSNEK 97
Query: 67 LERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR----V 122
+ + E+ L+ L+H N +++ ++ + ++ + G+ HK+ V
Sbjct: 98 WQDIIKEVRFLQKLRHPNTIQYRGCYL---REHTAWLVMEYCLGSASDLLEVHKKPLQEV 154
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH 182
I AV L+GL YLHSH+ +IHRD+K NI ++ G VK+GD G A+I+ +
Sbjct: 155 EIAAV---THGALQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIM--AP 206
Query: 183 AAHCVGTPEFMAPEVY----EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV 238
A VGTP +MAPEV E Y+ VD++S G+ +E+ + P + +Y +
Sbjct: 207 ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HI 265
Query: 239 VSGKKPDSLYRVKDPEVRRFVEKCLATVSL-RLSARELLNDPFLQIDDCESNL-----RS 292
+ P R FV+ CL + R ++ LL F+ + + + R+
Sbjct: 266 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRT 325
Query: 293 LDYSRELDDM 302
D RELD++
Sbjct: 326 KDAVRELDNL 335
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 128/278 (46%), Gaps = 38/278 (13%)
Query: 20 TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKT 79
TG YGR +I K K + W ++ ++ + + L E++LL+
Sbjct: 16 TGSYGRCQKIRRKSDGKIL------------VWKELDYGSMTEAEKQM--LVSEVNLLRE 61
Query: 80 LKHKNIMKFYTSWVDTANRNINFVTE---------MFTSGTLRQYRLKHKRVNIRAVKLW 130
LKH NI+++Y +D N + V E + T GT + L + V +R +
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV-LRVMT-- 118
Query: 131 CRQILRGLLYLHSHDP---PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILR--KSHAAH 185
Q+ L H V+HRDLK N+F++G Q VK+GD GLA IL + A
Sbjct: 119 --QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNHDEDFAKE 175
Query: 186 CVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKP 244
VGTP +M+PE + +YNE DI+S G + E+ P++ + ++ K+ GK
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-KELAGKIREGKFR 234
Query: 245 DSLYRVKDPEVRRFVEKCLATVSL-RLSARELLNDPFL 281
YR D E+ + + L R S E+L +P +
Sbjct: 235 RIPYRYSD-ELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 23/246 (9%)
Query: 12 SEFVEVDPTG---RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSP 64
S F + DPT R+ ++ + LGKG +V Y + G VA +++ + +
Sbjct: 28 SAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHL 86
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVN 123
D ER EI +LK+L+H NI+K+ RN+ + E G+LR Y KHK R++
Sbjct: 87 RDFER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 143
Query: 124 IRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA 183
+ + QI +G+ YL + IHRDL NI V N+ VKIGD GL +L +
Sbjct: 144 HIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKE 200
Query: 184 AHCVGTPE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKK 237
V P + APE + E ++ D++SFG+ + E+ F Y + PA+ +
Sbjct: 201 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRM 258
Query: 238 VVSGKK 243
+ + K+
Sbjct: 259 IGNDKQ 264
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 123/249 (49%), Gaps = 23/249 (9%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G G+ TVY+ ++ G +VA +K+ D +PE + E+ +L+ +H NI+ F
Sbjct: 44 IGSGSFGTVYKG--KWHG-DVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 90 TSWVDTANRNINFVTEMFTSGTL-RQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPV 148
N+ VT+ +L + ++ + + + RQ +G+ YLH+ + +
Sbjct: 99 GY---MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN--I 153
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPE----FMAPEVYE----E 200
IHRD+K +NIF++ VKIGD GLA + + + V P +MAPEV
Sbjct: 154 IHRDMKSNNIFLHEGL-TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSG-KKPD--SLYRVKDPEVRR 257
++ D+YS+G+ + E++T E PYS + QI V G PD LY+ ++R
Sbjct: 213 PFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKR 272
Query: 258 FVEKCLATV 266
V C+ V
Sbjct: 273 LVADCVKKV 281
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 68 ERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTL-RQYRLKHKRVNIRA 126
E +Y EI LLK+L H NI+K + + D + VTE + G L Q +HK A
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDK--KYFYLVTEFYEGGELFEQIINRHKFDECDA 148
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQG--EVKIGDLGLAAILRKSHAA 184
+ +QIL G+ YLH H+ ++HRD+K +NI + +KI D GL++ K +
Sbjct: 149 ANI-MKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205
Query: 185 H-CVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
+GT ++APEV ++ YNE D++S G+ I+ ++ YP + I KKV GK
Sbjct: 206 RDRLGTAYYIAPEVLKKKYNEKCDVWSCGV-IMYILLCGYPPFGGQNDQDIIKKVEKGK 263
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 25/259 (9%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E++G+GA V +A ++ +VA Q+ +S + + E+ L + H NI+K
Sbjct: 15 EVVGRGAFGVVCKA--KWRAKDVAIKQI------ESESERKAFIVELRQLSRVNHPNIVK 66
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-----VNIRAVKLWCRQILRGLLYLH 142
Y + ++ + V E G+L Y + H WC Q +G+ YLH
Sbjct: 67 LYGACLNP----VCLVMEYAEGGSL--YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 143 SHDP-PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA 201
S P +IHRDLK N+ + +KI D G A + ++H + G+ +MAPEV+E +
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-QTHMTNNKGSAAWMAPEVFEGS 179
Query: 202 -YNELVDIYSFGMCILEMVTFEYPYSECTHPA-QIYKKVVSGKKPDSLYRVKDPEVRRFV 259
Y+E D++S+G+ + E++T P+ E PA +I V +G +P + + P + +
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP-IESLM 238
Query: 260 EKCLAT-VSLRLSARELLN 277
+C + S R S E++
Sbjct: 239 TRCWSKDPSQRPSMEEIVK 257
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 146/310 (47%), Gaps = 29/310 (9%)
Query: 8 EPDCSE-FVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPED 66
+PD +E F + DP + EI G G+ VY A D VA ++ Y QS E
Sbjct: 1 DPDVAELFFKDDPEKLFSDLREI-GHGSFGAVYFARDVRNSEVVAIKKMS-YSGKQSNEK 58
Query: 67 LERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR----V 122
+ + E+ L+ L+H N +++ ++ + ++ + G+ HK+ V
Sbjct: 59 WQDIIKEVRFLQKLRHPNTIQYRGCYL---REHTAWLVMEYCLGSASDLLEVHKKPLQEV 115
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH 182
I AV L+GL YLHSH+ +IHRD+K NI ++ G VK+GD G A+I+ +
Sbjct: 116 EIAAV---THGALQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIM--AP 167
Query: 183 AAHCVGTPEFMAPEVY----EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV 238
A VGTP +MAPEV E Y+ VD++S G+ +E+ + P + +Y +
Sbjct: 168 ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HI 226
Query: 239 VSGKKPDSLYRVKDPEVRRFVEKCLATVSL-RLSARELLNDPFLQIDDCESNL-----RS 292
+ P R FV+ CL + R ++ LL F+ + + + R+
Sbjct: 227 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRT 286
Query: 293 LDYSRELDDM 302
D RELD++
Sbjct: 287 KDAVRELDNL 296
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 25/259 (9%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E++G+GA V +A ++ +VA Q+ +S + + E+ L + H NI+K
Sbjct: 14 EVVGRGAFGVVCKA--KWRAKDVAIKQI------ESESERKAFIVELRQLSRVNHPNIVK 65
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-----VNIRAVKLWCRQILRGLLYLH 142
Y + ++ + V E G+L Y + H WC Q +G+ YLH
Sbjct: 66 LYGACLNP----VCLVMEYAEGGSL--YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 143 SHDP-PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA 201
S P +IHRDLK N+ + +KI D G A + ++H + G+ +MAPEV+E +
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-QTHMTNNKGSAAWMAPEVFEGS 178
Query: 202 -YNELVDIYSFGMCILEMVTFEYPYSECTHPA-QIYKKVVSGKKPDSLYRVKDPEVRRFV 259
Y+E D++S+G+ + E++T P+ E PA +I V +G +P + + P + +
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP-IESLM 237
Query: 260 EKCLAT-VSLRLSARELLN 277
+C + S R S E++
Sbjct: 238 TRCWSKDPSQRPSMEEIVK 256
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 27/248 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHKNIMKF 88
+G G+ TVY+ ++ G +VA VK+ + +P+ L+ E+ +L+ +H NI+ F
Sbjct: 32 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW--CRQILRGLLYLHSHDP 146
+ + VT+ + G+ + L KL RQ RG+ YLH+
Sbjct: 86 MGY---STKPQLAIVTQ-WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS- 140
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH----CVGTPEFMAPEVYE--- 199
+IHRDLK +NIF++ + VKIGD GLA + +H G+ +MAPEV
Sbjct: 141 -IIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 200 -EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKD---PEV 255
Y+ D+Y+FG+ + E++T + PYS + QI + V G L +V+ +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 256 RRFVEKCL 263
+R + +CL
Sbjct: 259 KRLMAECL 266
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+++E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KEIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +K+ D GLA ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGLAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 23/244 (9%)
Query: 14 FVEVDPTG---RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPED 66
F + DPT R+ ++ LGKG +V Y + G VA +++ + + D
Sbjct: 2 FEDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRD 60
Query: 67 LERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIR 125
ER EI +LK+L+H NI+K+ RN+ + E G+LR+Y KHK R++
Sbjct: 61 FER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI 117
Query: 126 AVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH 185
+ + QI +G+ YL + IHRDL NI V N+ VKIGD GL +L +
Sbjct: 118 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 174
Query: 186 CVGTPE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVV 239
V P + APE + E ++ D++SFG+ + E+ F Y + PA+ + +
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRMIG 232
Query: 240 SGKK 243
+ K+
Sbjct: 233 NDKQ 236
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYMPGGDMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +K+ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYMPGGDMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +K+ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 13/256 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG + D + EV ++ L P E++ EI + ++L H++++ F+
Sbjct: 49 LGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D N + V E+ +L + + K + + + RQI+ G YLH + VI
Sbjct: 108 GFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 163
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV--GTPEFMAPEVY-EEAYNELV 206
HRDLK N+F+N + EVKIGD GLA + V GTP ++APEV ++ ++ V
Sbjct: 164 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 207 DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT- 265
D++S G CI+ + P E + + Y ++ K S+ + +P ++K L T
Sbjct: 223 DVWSIG-CIMYTLLVGKPPFETSCLKETYLRI--KKNEYSIPKHINPVAASLIQKMLQTD 279
Query: 266 VSLRLSARELLNDPFL 281
+ R + ELLND F
Sbjct: 280 PTARPTINELLNDEFF 295
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +K+ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 13/257 (5%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF 88
LGKG + D + EV ++ L P E++ EI + ++L H++++ F
Sbjct: 28 FLGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPV 148
+ + D N + V E+ +L + + K + + + RQI+ G YLH + V
Sbjct: 87 HGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--V 142
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLAAILR--KSHAAHCVGTPEFMAPEVY-EEAYNEL 205
IHRDLK N+F+N + EVKIGD GLA + GTP ++APEV ++ ++
Sbjct: 143 IHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 206 VDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT 265
VD++S G CI+ + P E + + Y ++ K S+ + +P ++K L T
Sbjct: 202 VDVWSIG-CIMYTLLVGKPPFETSCLKETYLRI--KKNEYSIPKHINPVAASLIQKMLQT 258
Query: 266 -VSLRLSARELLNDPFL 281
+ R + ELLND F
Sbjct: 259 DPTARPTINELLNDEFF 275
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 23/244 (9%)
Query: 14 FVEVDPTG---RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPED 66
F + DPT R+ ++ + LGKG +V Y + G VA +++ + + D
Sbjct: 6 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRD 64
Query: 67 LERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIR 125
ER EI +LK+L+H NI+K+ RN+ + E G+LR Y KHK R++
Sbjct: 65 FER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 121
Query: 126 AVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH 185
+ + QI +G+ YL + IHRDL NI V N+ VKIGD GL +L +
Sbjct: 122 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 178
Query: 186 CVGTPE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVV 239
V P + APE + E ++ D++SFG+ + E+ F Y + PA+ + +
Sbjct: 179 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRMIG 236
Query: 240 SGKK 243
+ K+
Sbjct: 237 NDKQ 240
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 161
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++ +
Sbjct: 162 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGATWT 218
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 219 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 275
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 27/248 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHKNIMKF 88
+G G+ TVY+ ++ G +VA VK+ + +P+ L+ E+ +L+ +H NI+ F
Sbjct: 32 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW--CRQILRGLLYLHSHDP 146
+ + VT+ + G+ + L KL RQ RG+ YLH+
Sbjct: 86 MGY---STAPQLAIVTQ-WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS- 140
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH----CVGTPEFMAPEVYE--- 199
+IHRDLK +NIF++ + VKIGD GLA + +H G+ +MAPEV
Sbjct: 141 -IIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 200 -EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKD---PEV 255
Y+ D+Y+FG+ + E++T + PYS + QI + V G L +V+ +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 256 RRFVEKCL 263
+R + +CL
Sbjct: 259 KRLMAECL 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 13/256 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG + D + EV ++ L P E++ EI + ++L H++++ F+
Sbjct: 25 LGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D N + V E+ +L + + K + + + RQI+ G YLH + VI
Sbjct: 84 GFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 139
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILR--KSHAAHCVGTPEFMAPEVY-EEAYNELV 206
HRDLK N+F+N + EVKIGD GLA + GTP ++APEV ++ ++ V
Sbjct: 140 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 207 DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT- 265
D++S G CI+ + P E + + Y ++ K S+ + +P ++K L T
Sbjct: 199 DVWSIG-CIMYTLLVGKPPFETSCLKETYLRI--KKNEYSIPKHINPVAASLIQKMLQTD 255
Query: 266 VSLRLSARELLNDPFL 281
+ R + ELLND F
Sbjct: 256 PTARPTINELLNDEFF 271
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 13/256 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG + D + EV ++ L P E++ EI + ++L H++++ F+
Sbjct: 25 LGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D N + V E+ +L + + K + + + RQI+ G YLH + VI
Sbjct: 84 GFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 139
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILR--KSHAAHCVGTPEFMAPEVY-EEAYNELV 206
HRDLK N+F+N + EVKIGD GLA + GTP ++APEV ++ ++ V
Sbjct: 140 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 207 DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT- 265
D++S G CI+ + P E + + Y ++ K S+ + +P ++K L T
Sbjct: 199 DVWSIG-CIMYTLLVGKPPFETSCLKETYLRI--KKNEYSIPKHINPVAASLIQKMLQTD 255
Query: 266 VSLRLSARELLNDPFL 281
+ R + ELLND F
Sbjct: 256 PTARPTINELLNDEFF 271
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 23/244 (9%)
Query: 14 FVEVDPTG---RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPED 66
F + DPT R+ ++ + LGKG +V Y + G VA +++ + + D
Sbjct: 4 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRD 62
Query: 67 LERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIR 125
ER EI +LK+L+H NI+K+ RN+ + E G+LR Y KHK R++
Sbjct: 63 FER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 119
Query: 126 AVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH 185
+ + QI +G+ YL + IHRDL NI V N+ VKIGD GL +L +
Sbjct: 120 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 176
Query: 186 CVGTPE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVV 239
V P + APE + E ++ D++SFG+ + E+ F Y + PA+ + +
Sbjct: 177 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRMIG 234
Query: 240 SGKK 243
+ K+
Sbjct: 235 NDKQ 238
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 13/256 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG + D + EV ++ L P E++ EI + ++L H++++ F+
Sbjct: 47 LGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D N + V E+ +L + + K + + + RQI+ G YLH + VI
Sbjct: 106 GFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 161
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV--GTPEFMAPEVY-EEAYNELV 206
HRDLK N+F+N + EVKIGD GLA + V GTP ++APEV ++ ++ V
Sbjct: 162 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 207 DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT- 265
D++S G CI+ + P E + + Y ++ K S+ + +P ++K L T
Sbjct: 221 DVWSIG-CIMYTLLVGKPPFETSCLKETYLRI--KKNEYSIPKHINPVAASLIQKMLQTD 277
Query: 266 VSLRLSARELLNDPFL 281
+ R + ELLND F
Sbjct: 278 PTARPTINELLNDEFF 293
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 23/244 (9%)
Query: 14 FVEVDPTG---RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPED 66
F + DPT R+ ++ + LGKG +V Y + G VA +++ + + D
Sbjct: 5 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRD 63
Query: 67 LERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIR 125
ER EI +LK+L+H NI+K+ RN+ + E G+LR Y KHK R++
Sbjct: 64 FER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 120
Query: 126 AVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH 185
+ + QI +G+ YL + IHRDL NI V N+ VKIGD GL +L +
Sbjct: 121 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 177
Query: 186 CVGTPE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVV 239
V P + APE + E ++ D++SFG+ + E+ F Y + PA+ + +
Sbjct: 178 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRMIG 235
Query: 240 SGKK 243
+ K+
Sbjct: 236 NDKQ 239
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 23/244 (9%)
Query: 14 FVEVDPTG---RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPED 66
F + DPT R+ ++ + LGKG +V Y + G VA +++ + + D
Sbjct: 3 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRD 61
Query: 67 LERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIR 125
ER EI +LK+L+H NI+K+ RN+ + E G+LR Y KHK R++
Sbjct: 62 FER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 118
Query: 126 AVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH 185
+ + QI +G+ YL + IHRDL NI V N+ VKIGD GL +L +
Sbjct: 119 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 175
Query: 186 CVGTPE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVV 239
V P + APE + E ++ D++SFG+ + E+ F Y + PA+ + +
Sbjct: 176 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRMIG 233
Query: 240 SGKK 243
+ K+
Sbjct: 234 NDKQ 237
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 23/240 (9%)
Query: 18 DPTG---RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERL 70
DPT R+ ++ + LGKG +V Y + G VA +++ + + D ER
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFER- 63
Query: 71 YCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKL 129
EI +LK+L+H NI+K+ RN+ + E G+LR Y KHK R++ +
Sbjct: 64 --EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 121
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGT 189
+ QI +G+ YL + IHRDL NI V N+ VKIGD GL +L + V
Sbjct: 122 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 190 PE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK 243
P + APE + E ++ D++SFG+ + E+ F Y + PA+ + + + K+
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRMIGNDKQ 236
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 14/271 (5%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHK 83
R + +GKG V A G EVA VK+ D Q +P L++L+ E+ ++K L H
Sbjct: 18 RLQKTIGKGNFAKVKLARHVLTGREVA---VKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
NI+K + V + + V E + G + Y + H R+ + + RQI+ + Y H
Sbjct: 75 NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVYE-EA 201
++HRDLK +N+ ++G+ +KI D G + + G+P + APE+++ +
Sbjct: 133 K--YIVHRDLKAENLLLDGDMN-IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 202 YN-ELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVE 260
Y+ VD++S G+ + +V+ P+ + + ++ ++V+ GK Y D E
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKL 248
Query: 261 KCLATVSLRLSARELLNDPFLQIDDCESNLR 291
L + R S +++ D ++ + E L+
Sbjct: 249 LVLNPIK-RGSLEQIMKDRWMNVGHEEEELK 278
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+++E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KEIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D GLA ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIQVTDFGLAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 23/240 (9%)
Query: 18 DPTG---RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERL 70
DPT R+ ++ + LGKG +V Y + G VA +++ + + D ER
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFER- 60
Query: 71 YCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKL 129
EI +LK+L+H NI+K+ RN+ + E G+LR Y KHK R++ +
Sbjct: 61 --EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGT 189
+ QI +G+ YL + IHRDL NI V N+ VKIGD GL +L + V
Sbjct: 119 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 190 PE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK 243
P + APE + E ++ D++SFG+ + E+ F Y + PA+ + + + K+
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRMIGNDKQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 27/248 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHKNIMKF 88
+G G+ TVY+ ++ G +VA VK+ + +P+ L+ E+ +L+ +H NI+ F
Sbjct: 44 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW--CRQILRGLLYLHSHDP 146
+ + VT+ + G+ + L +KL RQ +G+ YLH+
Sbjct: 98 MGY---STKPQLAIVTQ-WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 152
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH----CVGTPEFMAPEVY---- 198
+IHRDLK +NIF++ + VKIGD GLA + + +H G+ +MAPEV
Sbjct: 153 -IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKD---PEV 255
+ Y+ D+Y+FG+ + E++T + PYS + QI V G L +V+ +
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 270
Query: 256 RRFVEKCL 263
+R + +CL
Sbjct: 271 KRLMAECL 278
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 13/256 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG + D + EV ++ L P E++ EI + ++L H++++ F+
Sbjct: 23 LGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D N + V E+ +L + + K + + + RQI+ G YLH + VI
Sbjct: 82 GFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 137
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV--GTPEFMAPEVY-EEAYNELV 206
HRDLK N+F+N + EVKIGD GLA + V GTP ++APEV ++ ++ V
Sbjct: 138 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 207 DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT- 265
D++S G CI+ + P E + + Y ++ K S+ + +P ++K L T
Sbjct: 197 DVWSIG-CIMYTLLVGKPPFETSCLKETYLRI--KKNEYSIPKHINPVAASLIQKMLQTD 253
Query: 266 VSLRLSARELLNDPFL 281
+ R + ELLND F
Sbjct: 254 PTARPTINELLNDEFF 269
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 23/240 (9%)
Query: 18 DPTG---RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERL 70
DPT R+ ++ + LGKG +V Y + G VA +++ + + D ER
Sbjct: 1 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFER- 58
Query: 71 YCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKL 129
EI +LK+L+H NI+K+ RN+ + E G+LR Y KHK R++ +
Sbjct: 59 --EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 116
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGT 189
+ QI +G+ YL + IHRDL NI V N+ VKIGD GL +L + V
Sbjct: 117 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 173
Query: 190 PE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK 243
P + APE + E ++ D++SFG+ + E+ F Y + PA+ + + + K+
Sbjct: 174 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRMIGNDKQ 231
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 27/248 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHKNIMKF 88
+G G+ TVY+ ++ G +VA VK+ + +P+ L+ E+ +L+ +H NI+ F
Sbjct: 21 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW--CRQILRGLLYLHSHDP 146
+ + VT+ + G+ + L +KL RQ +G+ YLH+
Sbjct: 75 MGY---STKPQLAIVTQ-WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 129
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH----CVGTPEFMAPEVY---- 198
+IHRDLK +NIF++ + VKIGD GLA + + +H G+ +MAPEV
Sbjct: 130 -IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKD---PEV 255
+ Y+ D+Y+FG+ + E++T + PYS + QI V G L +V+ +
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 247
Query: 256 RRFVEKCL 263
+R + +CL
Sbjct: 248 KRLMAECL 255
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 141
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 198
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 199 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 255
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A + K
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 197 XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 23/240 (9%)
Query: 18 DPTG---RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERL 70
DPT R+ ++ + LGKG +V Y + G VA +++ + + D ER
Sbjct: 2 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFER- 59
Query: 71 YCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKL 129
EI +LK+L+H NI+K+ RN+ + E G+LR Y KHK R++ +
Sbjct: 60 --EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 117
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGT 189
+ QI +G+ YL + IHRDL NI V N+ VKIGD GL +L + V
Sbjct: 118 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 174
Query: 190 PE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK 243
P + APE + E ++ D++SFG+ + E+ F Y + PA+ + + + K+
Sbjct: 175 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRMIGNDKQ 232
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 23/240 (9%)
Query: 18 DPTG---RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERL 70
DPT R+ ++ + LGKG +V Y + G VA +++ + + D ER
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFER- 60
Query: 71 YCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKL 129
EI +LK+L+H NI+K+ RN+ + E G+LR Y KHK R++ +
Sbjct: 61 --EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGT 189
+ QI +G+ YL + IHRDL NI V N+ VKIGD GL +L + V
Sbjct: 119 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 190 PE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK 243
P + APE + E ++ D++SFG+ + E+ F Y + PA+ + + + K+
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRMIGNDKQ 233
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 27/248 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHKNIMKF 88
+G G+ TVY+ ++ G +VA VK+ + +P+ L+ E+ +L+ +H NI+ F
Sbjct: 43 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 96
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW--CRQILRGLLYLHSHDP 146
+ + VT+ + G+ + L +KL RQ +G+ YLH+
Sbjct: 97 MGY---STKPQLAIVTQ-WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 151
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH----CVGTPEFMAPEVY---- 198
+IHRDLK +NIF++ + VKIGD GLA + + +H G+ +MAPEV
Sbjct: 152 -IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKD---PEV 255
+ Y+ D+Y+FG+ + E++T + PYS + QI V G L +V+ +
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 269
Query: 256 RRFVEKCL 263
+R + +CL
Sbjct: 270 KRLMAECL 277
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 122/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
A YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLIID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEVY-EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +K+ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +K+ D G A ++
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWX 198
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 199 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 255
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 27/248 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHKNIMKF 88
+G G+ TVY+ ++ G +VA VK+ + +P+ L+ E+ +L+ +H NI+ F
Sbjct: 21 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW--CRQILRGLLYLHSHDP 146
+ + VT+ + G+ + L +KL RQ +G+ YLH+
Sbjct: 75 MGY---STKPQLAIVTQ-WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 129
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH----CVGTPEFMAPEVY---- 198
+IHRDLK +NIF++ + VKIGD GLA + + +H G+ +MAPEV
Sbjct: 130 -IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKD---PEV 255
+ Y+ D+Y+FG+ + E++T + PYS + QI V G L +V+ +
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 247
Query: 256 RRFVEKCL 263
+R + +CL
Sbjct: 248 KRLMAECL 255
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFXE 161
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 162 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 218
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 219 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 275
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADEPIQIYEKIVSGK 254
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A + K
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 197 XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEYSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWT 198
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 199 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 255
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEYSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 27/248 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHKNIMKF 88
+G G+ TVY+ ++ G +VA VK+ + +P+ L+ E+ +L+ +H NI+ F
Sbjct: 16 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW--CRQILRGLLYLHSHDP 146
+ + VT+ + G+ + L +KL RQ +G+ YLH+
Sbjct: 70 MGY---STKPQLAIVTQ-WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH----CVGTPEFMAPEVY---- 198
+IHRDLK +NIF++ + VKIGD GLA + + +H G+ +MAPEV
Sbjct: 125 -IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKD---PEV 255
+ Y+ D+Y+FG+ + E++T + PYS + QI V G L +V+ +
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 256 RRFVEKCL 263
+R + +CL
Sbjct: 243 KRLMAECL 250
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 23/240 (9%)
Query: 18 DPTG---RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERL 70
DPT R+ ++ + LGKG +V Y + G VA +++ + + D ER
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFER- 60
Query: 71 YCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKL 129
EI +LK+L+H NI+K+ RN+ + E G+LR Y KHK R++ +
Sbjct: 61 --EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGT 189
+ QI +G+ YL + IHRDL NI V N+ VKIGD GL +L + V
Sbjct: 119 YTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEFFKVKE 175
Query: 190 PE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK 243
P + APE + E ++ D++SFG+ + E+ F Y + PA+ + + + K+
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRMIGNDKQ 233
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 161
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 162 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 218
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 219 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 275
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 27/248 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHKNIMKF 88
+G G+ TVY+ ++ G +VA VK+ + +P+ L+ E+ +L+ +H NI+ F
Sbjct: 18 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 71
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW--CRQILRGLLYLHSHDP 146
+ + VT+ + G+ + L +KL RQ +G+ YLH+
Sbjct: 72 MGY---STKPQLAIVTQ-WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 126
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH----CVGTPEFMAPEVY---- 198
+IHRDLK +NIF++ + VKIGD GLA + + +H G+ +MAPEV
Sbjct: 127 -IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKD---PEV 255
+ Y+ D+Y+FG+ + E++T + PYS + QI V G L +V+ +
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 244
Query: 256 RRFVEKCL 263
+R + +CL
Sbjct: 245 KRLMAECL 252
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 198
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 199 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 255
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 198
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 199 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 255
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 76 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 133
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 134 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 190
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 191 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 247
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEYSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFAE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 70 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 127
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 128 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-EQGYIQVTDFGFAKRVKGRTWX 184
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 185 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 241
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFXE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +K+ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
EI+G G VYRAF + G EVA + + +E + E L LKH NI+
Sbjct: 13 EIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHD-P 146
V N+ V E G L + L KR+ + W QI RG+ YLH
Sbjct: 71 LRG--VCLKEPNLCLVMEFARGGPLNRV-LSGKRIPPDILVNWAVQIARGMNYLHDEAIV 127
Query: 147 PVIHRDLKCDNIFV-----NGNQGE--VKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE 199
P+IHRDLK NI + NG+ +KI D GLA ++ G +MAPEV
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIR 187
Query: 200 EA-YNELVDIYSFGMCILEMVTFEYPY 225
+ +++ D++S+G+ + E++T E P+
Sbjct: 188 ASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 198
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 199 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 255
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 198
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 199 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 255
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 20/233 (8%)
Query: 22 RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL 77
R+ ++ + LGKG +V Y + G VA +++ + + D ER EI +L
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFER---EIEIL 83
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILR 136
K+L+H NI+K+ RN+ + E G+LR Y KHK R++ + + QI +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPE----- 191
G+ YL + IHRDL NI V N+ VKIGD GL +L + V P
Sbjct: 144 GMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 192 FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK 243
+ APE + E ++ D++SFG+ + E+ F Y + PA+ + + + K+
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRMIGNDKQ 251
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 97 NRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCD 156
N N+ V E G + + + R + + + QI+ YLHS D +I+RDLK +
Sbjct: 114 NSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPE 171
Query: 157 NIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEV-YEEAYNELVDIYSFGMCI 215
N+ ++ QG +K+ D G A ++ C GTPE++APE+ + YN+ VD ++ G+ I
Sbjct: 172 NLLID-QQGYIKVADFGFAKRVKGRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 216 LEMVTFEYPYSECTHPAQIYKKVVSGK 242
EM YP P QIY+K+VSGK
Sbjct: 230 YEMAA-GYPPFFADQPIQIYEKIVSGK 255
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R
Sbjct: 78 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFXE 135
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 136 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 192
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 193 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 249
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + + K S+ D N N+ V E G + + + R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLTKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +K+ D G A ++
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWX 198
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 199 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 255
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 69 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSE 126
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 127 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWT 183
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 184 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 240
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 27/248 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHKNIMKF 88
+G G+ TVY+ ++ G +VA VK+ + +P+ L+ E+ +L+ +H NI+ F
Sbjct: 16 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW--CRQILRGLLYLHSHDP 146
+ + VT+ + G+ + L +KL RQ +G+ YLH+
Sbjct: 70 MGY---STAPQLAIVTQ-WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH----CVGTPEFMAPEVY---- 198
+IHRDLK +NIF++ + VKIGD GLA + + +H G+ +MAPEV
Sbjct: 125 -IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKD---PEV 255
+ Y+ D+Y+FG+ + E++T + PYS + QI V G L +V+ +
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 256 RRFVEKCL 263
+R + +CL
Sbjct: 243 KRLMAECL 250
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + + K S+ D N N+ V E G + + + R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLTKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +K+ D G A ++
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWX 198
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 199 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 255
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I +M YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 20/233 (8%)
Query: 22 RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL 77
R+ ++ + LGKG +V Y + G VA +++ + + D ER EI +L
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFER---EIEIL 83
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILR 136
K+L+H NI+K+ RN+ + E G+LR Y KHK R++ + + QI +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPE----- 191
G+ YL + IHRDL NI V N+ VKIGD GL +L + V P
Sbjct: 144 GMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 192 FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK 243
+ APE + E ++ D++SFG+ + E+ F Y + PA+ + + + K+
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRMIGNDKQ 251
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 18/248 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDX-ELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVEKC 262
R +++
Sbjct: 255 ARNYIQSL 262
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 110/218 (50%), Gaps = 21/218 (9%)
Query: 18 DPTG---RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERL 70
DPT R+ ++ + LGKG +V Y + G VA +++ + + D ER
Sbjct: 4 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFER- 61
Query: 71 YCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKL 129
EI +LK+L+H NI+K+ RN+ + E G+LR Y KHK R++ +
Sbjct: 62 --EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 119
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGT 189
+ QI +G+ YL + IHR+L NI V N+ VKIGD GL +L + + V
Sbjct: 120 YTSQICKGMEYLGTKR--YIHRNLATRNILVE-NENRVKIGDFGLTKVLPQDKEYYKVKE 176
Query: 190 PE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
P + APE + E ++ D++SFG+ + E+ T+
Sbjct: 177 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 214
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFXE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R
Sbjct: 76 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFXE 133
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 134 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 190
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 191 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 247
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFXE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFXE 141
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 198
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 199 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 255
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + + K S+ D N N+ V E G + + + R
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLTKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFXE 141
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +K+ D G A ++
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWX 198
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 199 LC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 255
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 83 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNED-SELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 196
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 255 VRRFVE 260
R +++
Sbjct: 257 ARNYIQ 262
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 87 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNED-SELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 200
Query: 199 EE--AYNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 255 VRRFVE 260
R +++
Sbjct: 261 ARNYIQ 266
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 108/204 (52%), Gaps = 21/204 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G TVY+ ++ G+ VA +VKL +P R EI L+K LKH+NI++
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR---EISLMKELKHENIVR 67
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKH------KRVNIRAVKLWCRQILRGLLYL 141
Y + T N+ + V E F L++Y + + + VK + Q+L+GL +
Sbjct: 68 LYDV-IHTENK-LTLVFE-FMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVY 198
H + ++HRDLK N+ +N +G++K+GD GLA I + ++ V T + AP+V
Sbjct: 125 HENK--ILHRDLKPQNLLIN-KRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVL 180
Query: 199 --EEAYNELVDIYSFGMCILEMVT 220
Y+ +DI+S G + EM+T
Sbjct: 181 MGSRTYSTSIDIWSCGCILAEMIT 204
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 138/295 (46%), Gaps = 58/295 (19%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF 88
+LG+GA V +A + + A +++ + E L + E+ LL +L H+ ++++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR-----HTEEKLSTILSEVXLLASLNHQYVVRY 67
Query: 89 YTSWVDTANRNINFV---TEMFTSGTL----------RQYRLKH-KRVNIRAVKLW--CR 132
Y +W++ NFV T + TL Y L H + +N + + W R
Sbjct: 68 YAAWLERR----NFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS----------- 181
QIL L Y+HS +IHR+LK NIF++ ++ VKIGD GLA + +S
Sbjct: 124 QILEALSYIHSQG--IIHRNLKPXNIFIDESRN-VKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 182 -----HAAHCVGTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPYSECTHPAQI 234
+ +GT ++A EV + YNE +D YS G+ E + YP+S I
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVNI 237
Query: 235 YKKV--VSGKKP----DSLYRVKDPEVRRFVEKCLATVSLRLSARELLNDPFLQI 283
KK+ VS + P D+ +V+ +R ++ + R AR LLN +L +
Sbjct: 238 LKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDH---DPNKRPGARTLLNSGWLPV 289
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE +APE+ + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 86 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDX-ELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 199
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 255 VRRFVE 260
R +++
Sbjct: 260 ARNYIQ 265
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 139/308 (45%), Gaps = 40/308 (12%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G GA V A D G +VA KLY QS +R Y E+ LLK ++H+N++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIK--KLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 90 TSWV--DTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPP 147
+ +T + +F M GT +KH+++ ++ Q+L+GL Y+H+
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG-- 148
Query: 148 VIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEE--AYNEL 205
+IHRDLK N+ VN + E+KI D GLA S V T + APEV Y +
Sbjct: 149 IIHRDLKPGNLAVNED-CELKILDFGLAR-QADSEMXGXVVTRWYRAPEVILNWMRYTQT 206
Query: 206 VDIYSFGMCILEMVTFEYPYSECTH--------------PAQIYKKVVSGKKPDSLYRVK 251
VDI+S G + EM+T + + H PA+ +++ S + + + +
Sbjct: 207 VDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLP 266
Query: 252 DPEVRRF--------------VEKCLAT-VSLRLSARELLNDPFLQ-IDDCESNLRSLDY 295
+ E + F +EK L R++A E L P+ + + D E + Y
Sbjct: 267 ELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQKY 326
Query: 296 SRELDDMD 303
DD+D
Sbjct: 327 DDSFDDVD 334
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
+ +E E +L+ + ++K S+ D N N+ V E G + + + R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
+ + QI+ YLHS D +I+RDLK +N+ ++ QG +++ D G A ++
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWX 197
Query: 185 HCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
C GTPE++AP + + YN+ VD ++ G+ I EM YP P QIY+K+VSGK
Sbjct: 198 LC-GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK 254
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSKPFQSIIHAKRTYRELRLLKHMKH 92
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 93 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 206
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 255 VRRFVE 260
R +++
Sbjct: 267 ARNYIQ 272
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 86 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDX-ELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 199
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 255 VRRFVE 260
R +++
Sbjct: 260 ARNYIQ 265
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 88 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTADEMTGY-VATRWYRAPEIM 201
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 255 VRRFVE 260
R +++
Sbjct: 262 ARNYIQ 267
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 101 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 214
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 255 VRRFVE 260
R +++
Sbjct: 275 ARNYIQ 280
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 99
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 100 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 158 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 213
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 273
Query: 255 VRRFVE 260
R +++
Sbjct: 274 ARNYIQ 279
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 92
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 93 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 206
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 255 VRRFVE 260
R +++
Sbjct: 267 ARNYIQ 272
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 91
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 92 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 150 KYIHSAD--IIHRDLKPSNLAVNEDX-ELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 205
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 265
Query: 255 VRRFVE 260
R +++
Sbjct: 266 ARNYIQ 271
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 92
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 93 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 206
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 255 VRRFVE 260
R +++
Sbjct: 267 ARNYIQ 272
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 88 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTADEMTGY-VATRWYRAPEIM 201
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 255 VRRFVE 260
R +++
Sbjct: 262 ARNYIQ 267
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 124/248 (50%), Gaps = 27/248 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHKNIMKF 88
+G G+ TVY+ ++ G +VA VK+ + +P+ L+ E+ +L+ +H NI+ F
Sbjct: 44 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW--CRQILRGLLYLHSHDP 146
+ + VT+ + G+ + L +KL RQ +G+ YLH+
Sbjct: 98 MGY---STKPQLAIVTQ-WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 152
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH----CVGTPEFMAPEVY---- 198
+IHRDLK +NIF++ + VKIGD GLA + +H G+ +MAPEV
Sbjct: 153 -IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKD---PEV 255
+ Y+ D+Y+FG+ + E++T + PYS + QI V G L +V+ +
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 270
Query: 256 RRFVEKCL 263
+R + +CL
Sbjct: 271 KRLMAECL 278
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 88 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTADEMTGY-VATRWYRAPEIM 201
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 255 VRRFVE 260
R +++
Sbjct: 262 ARNYIQ 267
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 83 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 196
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 255 VRRFVE 260
R +++
Sbjct: 257 ARNYIQ 262
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 83 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 196
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 255 VRRFVE 260
R +++
Sbjct: 257 ARNYIQ 262
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 130/277 (46%), Gaps = 31/277 (11%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSP----EDLERLYCEIHLLKTLKHK 83
E++GKGA V R + G + A V + F SP EDL+R E + LKH
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR---EASICHMLKHP 86
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI----RAVKLWCRQILRGLL 139
+I++ ++ +++ + V E L +K + RQIL L
Sbjct: 87 HIVELLETY--SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 140 YLHSHDPPVIHRDLKCDNIFVNG--NQGEVKIGDLGLAAILRKSH--AAHCVGTPEFMAP 195
Y HD +IHRD+K +N+ + N VK+GD G+A L +S A VGTP FMAP
Sbjct: 145 Y--CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 196 EVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK---KPDSLYRVK 251
EV + E Y + VD++ G+ + +++ P+ ++++ ++ GK P +
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHIS 260
Query: 252 DPE---VRRFVEKCLATVSLRLSARELLNDPFLQIDD 285
+ VRR + + + R++ E LN P+L+ D
Sbjct: 261 ESAKDLVRRML---MLDPAERITVYEALNHPWLKERD 294
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 103
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 104 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 162 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 217
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 277
Query: 255 VRRFVE 260
R +++
Sbjct: 278 ARNYIQ 283
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 83 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 196
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 255 VRRFVE 260
R +++
Sbjct: 257 ARNYIQ 262
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GL + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-SELKILDFGLCRHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 87 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 200
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 255 VRRFVE 260
R +++
Sbjct: 261 ARNYIQ 266
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 14 FVEVDPTG---RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPED 66
F + DPT R+ ++ + LGKG +V Y + G VA +++ + + D
Sbjct: 2 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRD 60
Query: 67 LERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH-KRVNIR 125
ER EI +LK+L+H NI+K+ RN+ + E G+LR Y H +R++
Sbjct: 61 FER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI 117
Query: 126 AVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH 185
+ + QI +G+ YL + IHRDL NI V N+ VKIGD GL +L +
Sbjct: 118 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 174
Query: 186 CVGTPE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVV 239
V P + APE + E ++ D++SFG+ + E+ F Y + PA+ + +
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--FTYIEKSKSPPAEFMRMIG 232
Query: 240 SGKK 243
+ K+
Sbjct: 233 NDKQ 236
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 86 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 199
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 255 VRRFVE 260
R +++
Sbjct: 260 ARNYIQ 265
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 79
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 80 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 137
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 138 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 193
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 194 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 253
Query: 255 VRRFVE 260
R +++
Sbjct: 254 ARNYIQ 259
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 88 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 201
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 255 VRRFVE 260
R +++
Sbjct: 262 ARNYIQ 267
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 103
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 104 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 162 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMXGY-VATRWYRAPEIM 217
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 277
Query: 255 VRRFVE 260
R +++
Sbjct: 278 ARNYIQ 283
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 91
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 92 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 150 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 205
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 265
Query: 255 VRRFVE 260
R +++
Sbjct: 266 ARNYIQ 271
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 78
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 79 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 136
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 137 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 192
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 252
Query: 255 VRRFVE 260
R +++
Sbjct: 253 ARNYIQ 258
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 124/248 (50%), Gaps = 27/248 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHKNIMKF 88
+G G+ TVY+ ++ G +VA VK+ + +P+ L+ E+ +L+ +H NI+ F
Sbjct: 36 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 89
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW--CRQILRGLLYLHSHDP 146
+ + VT+ + G+ + L +KL RQ +G+ YLH+
Sbjct: 90 MGY---STKPQLAIVTQ-WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 144
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH----CVGTPEFMAPEVY---- 198
+IHRDLK +NIF++ + VKIGD GLA + +H G+ +MAPEV
Sbjct: 145 -IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKD---PEV 255
+ Y+ D+Y+FG+ + E++T + PYS + QI V G L +V+ +
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 262
Query: 256 RRFVEKCL 263
+R + +CL
Sbjct: 263 KRLMAECL 270
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 87 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 200
Query: 199 EE--AYNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 255 VRRFVE 260
R +++
Sbjct: 261 ARNYIQ 266
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 86 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 199
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 255 VRRFVE 260
R +++
Sbjct: 260 ARNYIQ 265
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 77
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 78 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 136 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 191
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 251
Query: 255 VRRFVE 260
R +++
Sbjct: 252 ARNYIQ 257
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 77 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 190
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 255 VRRFVE 260
R +++
Sbjct: 251 ARNYIQ 256
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 77
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 78 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 136 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 191
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 251
Query: 255 VRRFVE 260
R +++
Sbjct: 252 ARNYIQ 257
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDAGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 129/281 (45%), Gaps = 19/281 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFL----QSPEDLERLYCEIHLLKTLKH 82
++ LG GA V AF+ +VA + F + + + EI +LK L H
Sbjct: 21 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLH 142
I+K ++ D + I V E+ G L + +KR+ KL+ Q+L + YLH
Sbjct: 81 PCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 137
Query: 143 SHDPPVIHRDLKCDNIFVNGNQGE--VKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVY- 198
+ +IHRDLK +N+ ++ + + +KI D G + IL ++ + GTP ++APEV
Sbjct: 138 ENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 195
Query: 199 ---EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK---PDSLYRVKD 252
YN VD +S G+ + ++ P+SE + ++ SGK P+ V +
Sbjct: 196 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 255
Query: 253 PEVRRFVEKCLATVSLRLSARELLNDPFLQIDDCESNLRSL 293
+ + + R + E L P+LQ +D + + L
Sbjct: 256 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 296
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 124/248 (50%), Gaps = 27/248 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHKNIMKF 88
+G G+ TVY+ ++ G +VA VK+ + +P+ L+ E+ +L+ +H NI+ F
Sbjct: 16 IGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW--CRQILRGLLYLHSHDP 146
+ + VT+ + G+ + L +KL RQ +G+ YLH+
Sbjct: 70 MGY---STKPQLAIVTQ-WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH----CVGTPEFMAPEVY---- 198
+IHRDLK +NIF++ + VKIGD GLA + +H G+ +MAPEV
Sbjct: 125 -IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKD---PEV 255
+ Y+ D+Y+FG+ + E++T + PYS + QI V G L +V+ +
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 256 RRFVEKCL 263
+R + +CL
Sbjct: 243 KRLMAECL 250
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 129/281 (45%), Gaps = 19/281 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFL----QSPEDLERLYCEIHLLKTLKH 82
++ LG GA V AF+ +VA + F + + + EI +LK L H
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLH 142
I+K ++ D + I V E+ G L + +KR+ KL+ Q+L + YLH
Sbjct: 200 PCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 256
Query: 143 SHDPPVIHRDLKCDNIFVNGNQGE--VKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVY- 198
+ +IHRDLK +N+ ++ + + +KI D G + IL ++ + GTP ++APEV
Sbjct: 257 ENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 314
Query: 199 ---EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK---PDSLYRVKD 252
YN VD +S G+ + ++ P+SE + ++ SGK P+ V +
Sbjct: 315 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 374
Query: 253 PEVRRFVEKCLATVSLRLSARELLNDPFLQIDDCESNLRSL 293
+ + + R + E L P+LQ +D + + L
Sbjct: 375 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 415
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDYGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLAR-HTDDEMTGXVATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 129/281 (45%), Gaps = 19/281 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFL----QSPEDLERLYCEIHLLKTLKH 82
++ LG GA V AF+ +VA + F + + + EI +LK L H
Sbjct: 14 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 73
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLH 142
I+K ++ D + I V E+ G L + +KR+ KL+ Q+L + YLH
Sbjct: 74 PCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 130
Query: 143 SHDPPVIHRDLKCDNIFVNGNQGE--VKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVY- 198
+ +IHRDLK +N+ ++ + + +KI D G + IL ++ + GTP ++APEV
Sbjct: 131 ENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 188
Query: 199 ---EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK---PDSLYRVKD 252
YN VD +S G+ + ++ P+SE + ++ SGK P+ V +
Sbjct: 189 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 248
Query: 253 PEVRRFVEKCLATVSLRLSARELLNDPFLQIDDCESNLRSL 293
+ + + R + E L P+LQ +D + + L
Sbjct: 249 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 289
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 12/263 (4%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG G V++ + G+ +A KL P ++ E+ +L I+ FY
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 89
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
++ ++ I+ E G+L Q K R+ + + +++GL YL ++
Sbjct: 90 GAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 146
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA-YNELVDI 208
HRD+K NI VN ++GE+K+ D G++ L S A VGT +M+PE + Y+ DI
Sbjct: 147 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 205
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKK---VVSGKKPDSLYRVKDPEVRRFVEKCL-A 264
+S G+ ++EM YP + I++ +V+ P V E + FV KCL
Sbjct: 206 WSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK 265
Query: 265 TVSLRLSARELLNDPFLQIDDCE 287
+ R ++L+ F++ D E
Sbjct: 266 NPAERADLKQLMVHAFIKRSDAE 288
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 129/281 (45%), Gaps = 19/281 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFL----QSPEDLERLYCEIHLLKTLKH 82
++ LG GA V AF+ +VA + F + + + EI +LK L H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLH 142
I+K ++ D + I V E+ G L + +KR+ KL+ Q+L + YLH
Sbjct: 75 PCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 131
Query: 143 SHDPPVIHRDLKCDNIFVNGNQGE--VKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVY- 198
+ +IHRDLK +N+ ++ + + +KI D G + IL ++ + GTP ++APEV
Sbjct: 132 ENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 199 ---EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK---PDSLYRVKD 252
YN VD +S G+ + ++ P+SE + ++ SGK P+ V +
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 253 PEVRRFVEKCLATVSLRLSARELLNDPFLQIDDCESNLRSL 293
+ + + R + E L P+LQ +D + + L
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 290
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 129/281 (45%), Gaps = 19/281 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFL----QSPEDLERLYCEIHLLKTLKH 82
++ LG GA V AF+ +VA + F + + + EI +LK L H
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLH 142
I+K ++ D + I V E+ G L + +KR+ KL+ Q+L + YLH
Sbjct: 214 PCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 270
Query: 143 SHDPPVIHRDLKCDNIFVNGNQGE--VKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVY- 198
+ +IHRDLK +N+ ++ + + +KI D G + IL ++ + GTP ++APEV
Sbjct: 271 ENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 328
Query: 199 ---EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK---PDSLYRVKD 252
YN VD +S G+ + ++ P+SE + ++ SGK P+ V +
Sbjct: 329 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 388
Query: 253 PEVRRFVEKCLATVSLRLSARELLNDPFLQIDDCESNLRSL 293
+ + + R + E L P+LQ +D + + L
Sbjct: 389 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 429
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 129/281 (45%), Gaps = 19/281 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFL----QSPEDLERLYCEIHLLKTLKH 82
++ LG GA V AF+ +VA + F + + + EI +LK L H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLH 142
I+K ++ D + I V E+ G L + +KR+ KL+ Q+L + YLH
Sbjct: 75 PCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 131
Query: 143 SHDPPVIHRDLKCDNIFVNGNQGE--VKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVY- 198
+ +IHRDLK +N+ ++ + + +KI D G + IL ++ + GTP ++APEV
Sbjct: 132 ENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 199 ---EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK---PDSLYRVKD 252
YN VD +S G+ + ++ P+SE + ++ SGK P+ V +
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 253 PEVRRFVEKCLATVSLRLSARELLNDPFLQIDDCESNLRSL 293
+ + + R + E L P+LQ +D + + L
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 290
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDRGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA A V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLAR-HTDDEMAGFVATRWYRAPEIM 194
Query: 199 EE--AYNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 129/281 (45%), Gaps = 19/281 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFL----QSPEDLERLYCEIHLLKTLKH 82
++ LG GA V AF+ +VA + F + + + EI +LK L H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLH 142
I+K ++ D + I V E+ G L + +KR+ KL+ Q+L + YLH
Sbjct: 75 PCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 131
Query: 143 SHDPPVIHRDLKCDNIFVNGNQGE--VKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVY- 198
+ +IHRDLK +N+ ++ + + +KI D G + IL ++ + GTP ++APEV
Sbjct: 132 ENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 199 ---EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK---PDSLYRVKD 252
YN VD +S G+ + ++ P+SE + ++ SGK P+ V +
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 253 PEVRRFVEKCLATVSLRLSARELLNDPFLQIDDCESNLRSL 293
+ + + R + E L P+LQ +D + + L
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 290
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA A V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLAR-HTDDEMAGFVATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDGGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G VA KL QS +R Y E+ LLK +KH
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 101 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 214
Query: 199 EE--AYNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 255 VRRFVE 260
R +++
Sbjct: 275 ARNYIQ 280
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 125/247 (50%), Gaps = 18/247 (7%)
Query: 20 TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLK 78
G Y R + +GKG V A G EVA +K+ D Q +P L++L+ E+ ++K
Sbjct: 14 IGNY-RLLKTIGKGNFAKVKLARHILTGREVA---IKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 79 TLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGL 138
L H NI+K + V + + + E + G + Y + H R+ + + RQI+ +
Sbjct: 70 ILNHPNIVKLFE--VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV 127
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVGTPEFMAPE 196
Y H ++HRDLK +N+ ++ + +KI D G + + A C G P + APE
Sbjct: 128 QY--CHQKRIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDAFC-GAPPYAAPE 183
Query: 197 VYE-EAYN-ELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
+++ + Y+ VD++S G+ + +V+ P+ + + ++ ++V+ GK Y D E
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCE 242
Query: 255 --VRRFV 259
++RF+
Sbjct: 243 NLLKRFL 249
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G VA KL QS +R Y E+ LLK +KH
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 99
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 100 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 158 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 213
Query: 199 EE--AYNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 273
Query: 255 VRRFVE 260
R +++
Sbjct: 274 ARNYIQ 279
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G VA KL QS +R Y E+ LLK +KH
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 77 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA A V T + APE+
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLAR-HTDDEMAGFVATRWYRAPEIM 190
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 255 VRRFVE 260
R +++
Sbjct: 251 ARNYIQ 256
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 121/245 (49%), Gaps = 18/245 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V ++D G+++A KL QS +R Y E+ LLK +KH
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 109
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGL 138
+N++ + + ++ VT + G +K +++ V+ QILRGL
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGL 167
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 168 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 223
Query: 199 EE--AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV-VSGKKPDSLY-RVKDPE 254
YN VDI+S G + E++T + H Q+ + + ++G P S+ R+ E
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHE 283
Query: 255 VRRFV 259
R ++
Sbjct: 284 ARNYI 288
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G VA KL QS +R Y E+ LLK +KH
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 90
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 91 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 148
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 149 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 204
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 205 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 264
Query: 255 VRRFVE 260
R +++
Sbjct: 265 ARNYIQ 270
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 23/183 (12%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--- 129
E+ +L +KH NI+++ S+ + N ++ V + G L KR+N + L
Sbjct: 73 EVAVLANMKHPNIVQYRESFEE--NGSLYIVMDYCEGGDL------FKRINAQKGVLFQE 124
Query: 130 -----WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS--H 182
W QI L H HD ++HRD+K NIF+ + G V++GD G+A +L +
Sbjct: 125 DQILDWFVQICLALK--HVHDRKILHRDIKSQNIFLTKD-GTVQLGDFGIARVLNSTVEL 181
Query: 183 AAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSG 241
A C+GTP +++PE+ E + YN DI++ G + E+ T ++ + E + K++SG
Sbjct: 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF-EAGSMKNLVLKIISG 240
Query: 242 KKP 244
P
Sbjct: 241 SFP 243
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G VA KL QS +R Y E+ LLK +KH
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 87 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 200
Query: 199 EE--AYNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 255 VRRFVE 260
R +++
Sbjct: 261 ARNYIQ 266
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 121/241 (50%), Gaps = 15/241 (6%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHK 83
R + +GKG V A G EVA +K+ D Q +P L++L+ E+ ++K L H
Sbjct: 15 RLLKTIGKGNFAKVKLARHILTGREVA---IKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
NI+K + V + + + E + G + Y + H R+ + + RQI+ + Y
Sbjct: 72 NIVKLFE--VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY--C 127
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVYE-EA 201
H ++HRDLK +N+ ++ + +KI D G + G+P + APE+++ +
Sbjct: 128 HQKRIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKK 186
Query: 202 YN-ELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE--VRRF 258
Y+ VD++S G+ + +V+ P+ + + ++ ++V+ GK Y D E ++RF
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKRF 245
Query: 259 V 259
+
Sbjct: 246 L 246
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 18/263 (6%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LGKGA V R + G+E A + S D ++L E + + L+H NI++
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVR 92
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPP 147
+ S + + + F ++ T G L + + + + +QIL + Y HS+
Sbjct: 93 LHDSIQEESFHYLVF--DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG-- 148
Query: 148 VIHRDLKCDNIFV--NGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAPEVY-EEAYN 203
++HR+LK +N+ + VK+ D GLA + S A H GTP +++PEV ++ Y+
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 208
Query: 204 ELVDIYSFGMCILEMVTFEYP--YSECTHPAQIYKKVVSGK--KPDSLYRVKDPEVRRFV 259
+ VDI++ G+ IL ++ YP + E H ++Y ++ +G P + PE + +
Sbjct: 209 KPVDIWACGV-ILYILLVGYPPFWDEDQH--RLYAQIKAGAYDYPSPEWDTVTPEAKSLI 265
Query: 260 EKCLAT-VSLRLSARELLNDPFL 281
+ L R++A + L P++
Sbjct: 266 DSMLTVNPKKRITADQALKVPWI 288
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 113/248 (45%), Gaps = 22/248 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQV-KLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
E +G GA V A G +VA ++ +D + + +R E+ +LK KH NI+
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVT---NAKRTLRELKILKHFKHDNII 117
Query: 87 KFYTSWVDTAN----RNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLH 142
T +++ V ++ S L Q + + + V+ + Q+LRGL Y+H
Sbjct: 118 AIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 176
Query: 143 SHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH------CVGTPEFMAPE 196
S VIHRDLK N+ VN N E+KIGD G+A L S A H V T + APE
Sbjct: 177 SAQ--VIHRDLKPSNLLVNEN-CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 197 VYEEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKD 252
+ Y + +D++S G EM+ +P H Q+ V+ P + V
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA 293
Query: 253 PEVRRFVE 260
VR +++
Sbjct: 294 ERVRAYIQ 301
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G+ VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI GLA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILGFGLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G VA KL QS +R Y E+ LLK +KH
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 77 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 190
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 255 VRRFVE 260
R +++
Sbjct: 251 ARNYIQ 256
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 117/239 (48%), Gaps = 16/239 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G GA +V A+D +VA KL QS R Y E+ LLK LKH+N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGLLYLHSHD 145
V T +I +E++ TL L K + ++ V+ Q+LRGL Y+HS
Sbjct: 94 D--VFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA--YN 203
+IHRDLK N+ VN + E++I D GLA + + V T + APE+ YN
Sbjct: 152 --IIHRDLKPSNVAVNED-SELRILDFGLARQADEEMTGY-VATRWYRAPEIMLNWMHYN 207
Query: 204 ELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVE 260
+ VDI+S G + E++ + +P S+ + +VV P+ L ++ R +++
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 266
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 119/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G VA KL QS +R Y E+ LLK +KH
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 101 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA V T + APE+
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLAR-HTDDEMXGXVATRWYRAPEIM 214
Query: 199 EE--AYNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 255 VRRFVE 260
R +++
Sbjct: 275 ARNYIQ 280
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 18/269 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG G V++ + G+ +A KL P ++ E+ +L I+ FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
++ ++ I+ E G+L Q K R+ + + +++GL YL ++
Sbjct: 71 GAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA-YNELVDI 208
HRD+K NI VN ++GE+K+ D G++ L S A VGT +M+PE + Y+ DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 209 YSFGMCILEMVTFEYPY------SECTHPAQIYKK---VVSGKKPDSLYRVKDPEVRRFV 259
+S G+ ++EM YP + P I++ +V+ P V E + FV
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFV 246
Query: 260 EKCL-ATVSLRLSARELLNDPFLQIDDCE 287
KCL + R ++L+ F++ D E
Sbjct: 247 NKCLIKNPAERADLKQLMVHAFIKRSDAE 275
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 119/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G VA KL QS +R Y E+ LLK +KH
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K ++ V+ QILRGL
Sbjct: 77 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGL 134
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D GLA + V T + APE+
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMTGY-VATRWYRAPEIM 190
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 255 VRRFVE 260
R +++
Sbjct: 251 ARNYIQ 256
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 113/248 (45%), Gaps = 22/248 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQV-KLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
E +G GA V A G +VA ++ +D + + +R E+ +LK KH NI+
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVT---NAKRTLRELKILKHFKHDNII 116
Query: 87 KFYTSWVDTAN----RNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLH 142
T +++ V ++ S L Q + + + V+ + Q+LRGL Y+H
Sbjct: 117 AIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 175
Query: 143 SHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH------CVGTPEFMAPE 196
S VIHRDLK N+ VN N E+KIGD G+A L S A H V T + APE
Sbjct: 176 SAQ--VIHRDLKPSNLLVNEN-CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 197 VYEEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKD 252
+ Y + +D++S G EM+ +P H Q+ V+ P + V
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA 292
Query: 253 PEVRRFVE 260
VR +++
Sbjct: 293 ERVRAYIQ 300
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 16/263 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG G V++ + G+ +A KL P ++ E+ +L I+ FY
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 73
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
++ ++ I+ E G+L Q K R+ + + +++GL YL ++
Sbjct: 74 GAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 130
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA-YNELVDI 208
HRD+K NI VN ++GE+K+ D G++ L A VGT +M+PE + Y+ DI
Sbjct: 131 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDI 189
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKK---VVSGKKPDSLYRVKDPEVRRFVEKCL-A 264
+S G+ ++EM YP P I++ +V+ P V E + FV KCL
Sbjct: 190 WSMGLSLVEMAVGRYPRP----PMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIK 245
Query: 265 TVSLRLSARELLNDPFLQIDDCE 287
+ R ++L+ F++ D E
Sbjct: 246 NPAERADLKQLMVHAFIKRSDAE 268
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 117/239 (48%), Gaps = 16/239 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G GA +V A+D +VA KL QS R Y E+ LLK LKH+N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGLLYLHSHD 145
V T +I +E++ TL L K + ++ V+ Q+LRGL Y+HS
Sbjct: 94 D--VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA--YN 203
+IHRDLK N+ VN + E++I D GLA + + V T + APE+ YN
Sbjct: 152 --IIHRDLKPSNVAVNED-SELRILDFGLARQADEEMTGY-VATRWYRAPEIMLNWMHYN 207
Query: 204 ELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVE 260
+ VDI+S G + E++ + +P S+ + +VV P+ L ++ R +++
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 266
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 135/274 (49%), Gaps = 20/274 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHK 83
R + +GKG V A G EVA VK+ D Q + L++L+ E+ ++K L H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
NI+K + V + + V E + G + Y + H R+ + + RQI+ + Y
Sbjct: 74 NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--C 129
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVGTPEFMAPEVYE-E 200
H ++HRDLK +N+ ++ + +KI D G + A C G P + APE+++ +
Sbjct: 130 HQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDAFC-GAPPYAAPELFQGK 187
Query: 201 AYN-ELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE--VRR 257
Y+ VD++S G+ + +V+ P+ + + ++ ++V+ GK Y D E +++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 246
Query: 258 FVEKCLATVSLRLSARELLNDPFLQIDDCESNLR 291
F+ + S R + +++ D ++ + + L+
Sbjct: 247 FL---ILNPSKRGTLEQIMKDRWMNVGHEDDELK 277
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 129/264 (48%), Gaps = 18/264 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
E LGKGA V R + G+E A + S D ++L E + + L+H NI+
Sbjct: 10 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIV 67
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
+ + S + + + F ++ T G L + + + + +QIL + Y HS+
Sbjct: 68 RLHDSIQEESFHYLVF--DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG- 124
Query: 147 PVIHRDLKCDNIFV--NGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAPEVY-EEAY 202
++HR+LK +N+ + VK+ D GLA + S A H GTP +++PEV ++ Y
Sbjct: 125 -IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 183
Query: 203 NELVDIYSFGMCILEMVTFEYP--YSECTHPAQIYKKVVSGK--KPDSLYRVKDPEVRRF 258
++ VDI++ G+ IL ++ YP + E H ++Y ++ +G P + PE +
Sbjct: 184 SKPVDIWACGV-ILYILLVGYPPFWDEDQH--RLYAQIKAGAYDYPSPEWDTVTPEAKSL 240
Query: 259 VEKCLAT-VSLRLSARELLNDPFL 281
++ L R++A + L P++
Sbjct: 241 IDSMLTVNPKKRITADQALKVPWI 264
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 129/264 (48%), Gaps = 18/264 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
E LGKGA V R + G+E A + S D ++L E + + L+H NI+
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIV 68
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
+ + S + + + F ++ T G L + + + + +QIL + Y HS+
Sbjct: 69 RLHDSIQEESFHYLVF--DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG- 125
Query: 147 PVIHRDLKCDNIFV--NGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAPEVY-EEAY 202
++HR+LK +N+ + VK+ D GLA + S A H GTP +++PEV ++ Y
Sbjct: 126 -IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 203 NELVDIYSFGMCILEMVTFEYP--YSECTHPAQIYKKVVSGK--KPDSLYRVKDPEVRRF 258
++ VDI++ G+ IL ++ YP + E H ++Y ++ +G P + PE +
Sbjct: 185 SKPVDIWACGV-ILYILLVGYPPFWDEDQH--RLYAQIKAGAYDYPSPEWDTVTPEAKSL 241
Query: 259 VEKCLAT-VSLRLSARELLNDPFL 281
++ L R++A + L P++
Sbjct: 242 IDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 129/264 (48%), Gaps = 18/264 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
E LGKGA V R + G+E A + S D ++L E + + L+H NI+
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIV 68
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
+ + S + + + F ++ T G L + + + + +QIL + Y HS+
Sbjct: 69 RLHDSIQEESFHYLVF--DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG- 125
Query: 147 PVIHRDLKCDNIFV--NGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAPEVY-EEAY 202
++HR+LK +N+ + VK+ D GLA + S A H GTP +++PEV ++ Y
Sbjct: 126 -IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 203 NELVDIYSFGMCILEMVTFEYP--YSECTHPAQIYKKVVSGK--KPDSLYRVKDPEVRRF 258
++ VDI++ G+ IL ++ YP + E H ++Y ++ +G P + PE +
Sbjct: 185 SKPVDIWACGV-ILYILLVGYPPFWDEDQH--RLYAQIKAGAYDYPSPEWDTVTPEAKSL 241
Query: 259 VEKCLAT-VSLRLSARELLNDPFL 281
++ L R++A + L P++
Sbjct: 242 IDSMLTVNPKKRITADQALKVPWI 265
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 135/273 (49%), Gaps = 18/273 (6%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHK 83
R + +GKG V A G EVA VK+ D Q + L++L+ E+ ++K L H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
NI+K + V + + V E + G + Y + H R+ + + RQI+ + Y
Sbjct: 74 NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--C 129
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVYE-EA 201
H ++HRDLK +N+ ++ + +KI D G + + G+P + APE+++ +
Sbjct: 130 HQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 202 YN-ELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE--VRRF 258
Y+ VD++S G+ + +V+ P+ + + ++ ++V+ GK Y D E +++F
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKF 247
Query: 259 VEKCLATVSLRLSARELLNDPFLQIDDCESNLR 291
+ + S R + +++ D ++ + + L+
Sbjct: 248 L---ILNPSKRGTLEQIMKDRWMNVGHEDDELK 277
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 135/273 (49%), Gaps = 18/273 (6%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHK 83
R + +GKG V A G EVA VK+ D Q + L++L+ E+ ++K L H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
NI+K + V + + V E + G + Y + H R+ + + RQI+ + Y
Sbjct: 74 NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--C 129
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVYE-EA 201
H ++HRDLK +N+ ++ + +KI D G + + G+P + APE+++ +
Sbjct: 130 HQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 202 YN-ELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE--VRRF 258
Y+ VD++S G+ + +V+ P+ + + ++ ++V+ GK Y D E +++F
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKF 247
Query: 259 VEKCLATVSLRLSARELLNDPFLQIDDCESNLR 291
+ + S R + +++ D ++ + + L+
Sbjct: 248 L---ILNPSKRGTLEQIMKDRWMNVGHEDDELK 277
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 117/239 (48%), Gaps = 16/239 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G GA +V A+D +VA KL QS R Y E+ LLK LKH+N++
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGLLYLHSHD 145
V T +I +E++ TL L K + ++ V+ Q+LRGL Y+HS
Sbjct: 86 D--VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 143
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA--YN 203
+IHRDLK N+ VN + E++I D GLA + + V T + APE+ YN
Sbjct: 144 --IIHRDLKPSNVAVNED-CELRILDFGLARQADEEMTGY-VATRWYRAPEIMLNWMHYN 199
Query: 204 ELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVE 260
+ VDI+S G + E++ + +P S+ + +VV P+ L ++ R +++
Sbjct: 200 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 258
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 84/154 (54%), Gaps = 10/154 (6%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCR 132
EI +L+TL H++I+K+ D ++ V E G+LR Y +H + + + L+ +
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQ 141
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----G 188
QI G+ YLH+ IHRDL N+ ++ N VKIGD GLA + + H + V
Sbjct: 142 QICEGMAYLHAQH--YIHRDLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEXYRVREDGD 198
Query: 189 TPEFM-APEVYEE-AYNELVDIYSFGMCILEMVT 220
+P F APE +E + D++SFG+ + E++T
Sbjct: 199 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 20 TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKT 79
T Y Y +I GKGA V R G E A + S D ++L E + +
Sbjct: 3 TDEYQLYEDI-GKGAFSVVRRCVKLCTGHEYAAKIINTKKL--SARDHQKLEREARICRL 59
Query: 80 LKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLL 139
LKH NI++ + S + + F ++ T G L + + + + +QIL +L
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVF--DLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 117
Query: 140 YLHSHDPPVIHRDLKCDNIFVNG--NQGEVKIGDLGLAAILRKSHAAH--CVGTPEFMAP 195
H H V+HRDLK +N+ + VK+ D GLA ++ A GTP +++P
Sbjct: 118 --HCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
Query: 196 EVY-EEAYNELVDIYSFGMCILEMVTFEYP--YSECTHPAQIYKKVVSGKK--PDSLYRV 250
EV +EAY + VDI++ G+ IL ++ YP + E H ++Y+++ +G P +
Sbjct: 176 EVLRKEAYGKPVDIWACGV-ILYILLVGYPPFWDEDQH--KLYQQIKAGAYDFPSPEWDT 232
Query: 251 KDPEVRRFVEKCLAT-VSLRLSARELLNDPFL 281
PE + + + L + R++A E L P++
Sbjct: 233 VTPEAKNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 85/154 (55%), Gaps = 10/154 (6%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCR 132
EI +L+TL H++I+K+ D +++ V E G+LR Y +H + + + L+ +
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQ 124
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----G 188
QI G+ YLHS IHR+L N+ ++ N VKIGD GLA + + H + V
Sbjct: 125 QICEGMAYLHSQH--YIHRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 189 TPEFM-APEVYEE-AYNELVDIYSFGMCILEMVT 220
+P F APE +E + D++SFG+ + E++T
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 135/273 (49%), Gaps = 18/273 (6%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHK 83
R + +GKG V A G EVA V++ D Q + L++L+ E+ ++K L H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVA---VRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
NI+K + V + + V E + G + Y + H R+ + + RQI+ + Y
Sbjct: 74 NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--C 129
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVYE-EA 201
H ++HRDLK +N+ ++ + +KI D G + + G+P + APE+++ +
Sbjct: 130 HQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 202 YN-ELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE--VRRF 258
Y+ VD++S G+ + +V+ P+ + + ++ ++V+ GK Y D E +++F
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKF 247
Query: 259 VEKCLATVSLRLSARELLNDPFLQIDDCESNLR 291
+ + S R + +++ D ++ + + L+
Sbjct: 248 L---ILNPSKRGTLEQIMKDRWMNVGHEDDELK 277
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 119/246 (48%), Gaps = 18/246 (7%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA +V AFD G VA KL QS +R Y E+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL----KHKRVNIRAVKLWCRQILRGL 138
+N++ V T R++ +++ L L K +++ V+ QILRGL
Sbjct: 81 ENVIGLLD--VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY 198
Y+HS D +IHRDLK N+ VN + E+KI D LA + V T + APE+
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNED-CELKILDFYLARHTDDEMTGY-VATRWYRAPEIM 194
Query: 199 EEA--YNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
YN+ VDI+S G + E++T +P ++ ++ ++V + L ++
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 255 VRRFVE 260
R +++
Sbjct: 255 ARNYIQ 260
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCR 132
EI +L+TL H++I+K+ D +++ V E G+LR Y +H V + + L+ +
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQ 118
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----G 188
QI G+ YLH+ IHR L N+ ++ N VKIGD GLA + + H + V
Sbjct: 119 QICEGMAYLHAQH--YIHRALAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 175
Query: 189 TPEFM-APEVYEEA-YNELVDIYSFGMCILEMVTF 221
+P F APE +E + D++SFG+ + E++T+
Sbjct: 176 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLTY 210
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCR 132
EI +L+TL H++I+K+ D +++ V E G+LR Y +H V + + L+ +
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQ 119
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----G 188
QI G+ YLH+ IHR L N+ ++ N VKIGD GLA + + H + V
Sbjct: 120 QICEGMAYLHAQH--YIHRALAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 176
Query: 189 TPEFM-APEVYEEA-YNELVDIYSFGMCILEMVTF 221
+P F APE +E + D++SFG+ + E++T+
Sbjct: 177 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLTY 211
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 135/273 (49%), Gaps = 18/273 (6%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHK 83
R + +GKG V A G EVA V++ D Q + L++L+ E+ ++K L H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVA---VRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
NI+K + V + + V E + G + Y + H R+ + + RQI+ + Y
Sbjct: 74 NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--C 129
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA-AILRKSHAAHCVGTPEFMAPEVYE-EA 201
H ++HRDLK +N+ ++ + +KI D G + + G+P + APE+++ +
Sbjct: 130 HQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKK 188
Query: 202 YN-ELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE--VRRF 258
Y+ VD++S G+ + +V+ P+ + + ++ ++V+ GK Y D E +++F
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKF 247
Query: 259 VEKCLATVSLRLSARELLNDPFLQIDDCESNLR 291
+ + S R + +++ D ++ + + L+
Sbjct: 248 L---ILNPSKRGTLEQIMKDRWMNVGHEDDELK 277
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 45/221 (20%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-EIHLLKTLKHKN 84
+ E+LGKG + G + ++ +D E+ +R + E+ +++ L+H N
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-----EETQRTFLKEVKVMRCLEHPN 68
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLR--------QYRLKHKRVNIRAVKLWCRQILR 136
++KF V ++ +NF+TE GTLR QY +RV+ + + I
Sbjct: 69 VLKFIG--VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWS-QRVS------FAKDIAS 119
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL-----------------R 179
G+ YLHS + +IHRDL N V N+ V + D GLA ++ R
Sbjct: 120 GMAYLHSMN--IIHRDLNSHNCLVRENK-NVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 180 KSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMV 219
K VG P +MAPE+ +Y+E VD++SFG+ + E++
Sbjct: 177 KKRYT-VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Query: 76 LLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQIL 135
+L + H I++ + ++ D + I + + G L K +R K + ++
Sbjct: 59 MLSIVTHPFIIRMWGTFQDA--QQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC 116
Query: 136 RGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAP 195
L YLHS D +I+RDLK +NI ++ N G +KI D G A + C GTP+++AP
Sbjct: 117 LALEYLHSKD--IIYRDLKPENILLDKN-GHIKITDFGFAKYVPDVTYXLC-GTPDYIAP 172
Query: 196 EVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
EV + YN+ +D +SFG+ I EM+ P+ + ++ + Y+K+++ +
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD-SNTMKTYEKILNAE 219
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 131/273 (47%), Gaps = 17/273 (6%)
Query: 18 DPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL 77
D +Y +E +G G V A G VA +K+ D DL R+ EI L
Sbjct: 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVA---IKIMDKNTLGSDLPRIKTEIEAL 62
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRG 137
K L+H++I + Y ++TAN+ I V E G L Y + R++ ++ RQI+
Sbjct: 63 KNLRHQHICQLYHV-LETANK-IFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSA 120
Query: 138 LLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS---HAAHCVGTPEFMA 194
+ Y+HS HRDLK +N+ + ++K+ D GL A + + H C G+ + A
Sbjct: 121 VAYVHSQG--YAHRDLKPENLLFD-EYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAA 177
Query: 195 PEVYE-EAY-NELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKD 252
PE+ + ++Y D++S G+ + ++ P+ + + +YKK++ GK + +
Sbjct: 178 PELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD-DNVMALYKKIMRGKY--DVPKWLS 234
Query: 253 PEVRRFVEKCLAT-VSLRLSARELLNDPFLQID 284
P +++ L R+S + LLN P++ D
Sbjct: 235 PSSILLLQQMLQVDPKKRISMKNLLNHPWIMQD 267
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 85/154 (55%), Gaps = 10/154 (6%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCR 132
EI +L+TL H++I+K+ D +++ V E G+LR Y +H + + + L+ +
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQ 124
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----G 188
QI G+ YLH+ IHR+L N+ ++ N VKIGD GLA + + H + V
Sbjct: 125 QICEGMAYLHAQH--YIHRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 189 TPEFM-APEVYEE-AYNELVDIYSFGMCILEMVT 220
+P F APE +E + D++SFG+ + E++T
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 120/242 (49%), Gaps = 17/242 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHK 83
R + +GKG V A G EVA VK+ D Q + L++L+ E+ + K L H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
NI+K + V + + V E + G + Y + H R + + RQI+ + Y
Sbjct: 74 NIVKLFE--VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQY--C 129
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA--AHCVGTPEFMAPEVYE-E 200
H ++HRDLK +N+ ++ + +KI D G + + A C G P + APE+++ +
Sbjct: 130 HQKFIVHRDLKAENLLLDADXN-IKIADFGFSNEFTFGNKLDAFC-GAPPYAAPELFQGK 187
Query: 201 AYN-ELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE--VRR 257
Y+ VD++S G+ + +V+ P+ + + ++ ++V+ GK Y D E +++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYXSTDCENLLKK 246
Query: 258 FV 259
F+
Sbjct: 247 FL 248
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 123/259 (47%), Gaps = 35/259 (13%)
Query: 27 NEILGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLK-TLK 81
+++LGKG+ V+ A +++ I+ V L D +D+E E +L +
Sbjct: 23 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD-----DDVECTMVEKRVLSLAWE 77
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H + + ++ N+ FV E G L + + ++ + +I+ GL +L
Sbjct: 78 HPFLTHMFCTF--QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFL 135
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA--ILRKSHAAHCVGTPEFMAPEVY- 198
HS +++RDLK DNI ++ + G +KI D G+ +L + GTP+++APE+
Sbjct: 136 HSKG--IVYRDLKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILL 192
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY---RVKDPEV 255
+ YN VD +SFG+ + EM+ + P+ G+ + L+ R+ +P
Sbjct: 193 GQKYNHSVDWWSFGVLLYEMLIGQSPF--------------HGQDEEELFHSIRMDNPFY 238
Query: 256 RRFVEKCLATVSLRLSARE 274
R++EK + ++L RE
Sbjct: 239 PRWLEKEAKDLLVKLFVRE 257
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 19/264 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LGKGA V R G E A + S D ++L E + + LKH NI++
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL--SARDHQKLEREARICRLLKHPNIVR 85
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPP 147
+ S + + + F ++ T G L + + + + +QIL +L H H
Sbjct: 86 LHDSISEEGHHYLIF--DLVTGGELFEDIVAREYYSEADASHCIQQILEAVL--HCHQMG 141
Query: 148 VIHRDLKCDNIFVNG--NQGEVKIGDLGLAAILRKSHAAH--CVGTPEFMAPEVY-EEAY 202
V+HRDLK +N+ + VK+ D GLA + A GTP +++PEV ++ Y
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 203 NELVDIYSFGMCILEMVTFEYP--YSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRRF 258
+ VD+++ G+ IL ++ YP + E H ++Y+++ +G P + PE +
Sbjct: 202 GKPVDLWACGV-ILYILLVGYPPFWDEDQH--RLYQQIKAGAYDFPSPEWDTVTPEAKDL 258
Query: 259 VEKCLAT-VSLRLSARELLNDPFL 281
+ K L S R++A E L P++
Sbjct: 259 INKMLTINPSKRITAAEALKHPWI 282
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 113/246 (45%), Gaps = 23/246 (9%)
Query: 18 DPT---GRYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERL 70
DPT R+ +Y LGKG +V Y + G VA Q++ P+
Sbjct: 3 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH----SGPDQQRDF 58
Query: 71 YCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKL 129
EI +LK L I+K+ +++ V E SG LR + +H+ R++ + L
Sbjct: 59 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 118
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGT 189
+ QI +G+ YL S +HRDL NI V ++ VKI D GLA +L + V
Sbjct: 119 YSSQICKGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVRE 175
Query: 190 PE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK 243
P + APE + + ++ D++SFG+ + E+ F Y C+ A+ + + S +
Sbjct: 176 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL--FTYCDKSCSPSAEFLRMMGSERD 233
Query: 244 PDSLYR 249
+L R
Sbjct: 234 VPALSR 239
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 123/259 (47%), Gaps = 35/259 (13%)
Query: 27 NEILGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLK-TLK 81
+++LGKG+ V+ A +++ I+ V L D +D+E E +L +
Sbjct: 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD-----DDVECTMVEKRVLSLAWE 76
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H + + ++ N+ FV E G L + + ++ + +I+ GL +L
Sbjct: 77 HPFLTHMFCTF--QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFL 134
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA--ILRKSHAAHCVGTPEFMAPEVY- 198
HS +++RDLK DNI ++ + G +KI D G+ +L + GTP+++APE+
Sbjct: 135 HSKG--IVYRDLKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILL 191
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY---RVKDPEV 255
+ YN VD +SFG+ + EM+ + P+ G+ + L+ R+ +P
Sbjct: 192 GQKYNHSVDWWSFGVLLYEMLIGQSPF--------------HGQDEEELFHSIRMDNPFY 237
Query: 256 RRFVEKCLATVSLRLSARE 274
R++EK + ++L RE
Sbjct: 238 PRWLEKEAKDLLVKLFVRE 256
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG G V++ + G+ +A KL P ++ E+ +L I+ FY
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 132
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
++ ++ I+ E G+L Q K R+ + + +++GL YL ++
Sbjct: 133 GAFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 189
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA-YNELVDI 208
HRD+K NI VN ++GE+K+ D G++ L S A VGT +M+PE + Y+ DI
Sbjct: 190 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 248
Query: 209 YSFGMCILEMVTFEYP 224
+S G+ ++EM YP
Sbjct: 249 WSMGLSLVEMAVGRYP 264
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSP----EDLERLYCEIHLLKTLKHK 83
E++GKG V R + G + A V + F SP EDL+R E + LKH
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR---EASICHMLKHP 88
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI----RAVKLWCRQILRGLL 139
+I++ ++ +++ + V E L +K + RQIL L
Sbjct: 89 HIVELLETY--SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 146
Query: 140 YLHSHDPPVIHRDLK--CDNIFVNGNQGEVKIGDLGLAAILRKSH--AAHCVGTPEFMAP 195
Y HD +IHRD+K C + N VK+G G+A L +S A VGTP FMAP
Sbjct: 147 Y--CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 204
Query: 196 EVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK---KPDSLYRVK 251
EV + E Y + VD++ G+ + +++ P+ ++++ ++ GK P +
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHIS 262
Query: 252 DPE---VRRFVEKCLATVSLRLSARELLNDPFLQIDD 285
+ VRR + + + R++ E LN P+L+ D
Sbjct: 263 ESAKDLVRRML---MLDPAERITVYEALNHPWLKERD 296
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 109/212 (51%), Gaps = 20/212 (9%)
Query: 19 PTGRYGRYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIH 75
P G + ++ +G+G VY+A ++ G VA +++L + P R EI
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EIS 57
Query: 76 LLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQ 133
LLK L H NI+K + T N+ + V E F S L+++ I +K + Q
Sbjct: 58 LLKELNHPNIVKLLDV-IHTENK-LYLVFE-FLSMDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTP 190
+L+GL + HSH V+HRDLK +N+ +N +G +K+ D GLA + +++ H V T
Sbjct: 115 LLQGLAFCHSHR--VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTL 170
Query: 191 EFMAPEVYE--EAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y+ VDI+S G EMVT
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSP----EDLERLYCEIHLLKTLKHK 83
E++GKG V R + G + A V + F SP EDL+R E + LKH
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR---EASICHMLKHP 86
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI----RAVKLWCRQILRGLL 139
+I++ ++ +++ + V E L +K + RQIL L
Sbjct: 87 HIVELLETY--SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 140 YLHSHDPPVIHRDLK--CDNIFVNGNQGEVKIGDLGLAAILRKSH--AAHCVGTPEFMAP 195
Y HD +IHRD+K C + N VK+G G+A L +S A VGTP FMAP
Sbjct: 145 Y--CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 196 EVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK---KPDSLYRVK 251
EV + E Y + VD++ G+ + +++ P+ ++++ ++ GK P +
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHIS 260
Query: 252 DPE---VRRFVEKCLATVSLRLSARELLNDPFLQIDD 285
+ VRR + + + R++ E LN P+L+ D
Sbjct: 261 ESAKDLVRRML---MLDPAERITVYEALNHPWLKERD 294
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 18 DPT---GRYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERL 70
DPT R+ +Y LGKG +V Y + G VA Q++ + D +R
Sbjct: 4 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQR- 61
Query: 71 YCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKL 129
EI +LK L I+K+ +++ V E SG LR + +H+ R++ + L
Sbjct: 62 --EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 119
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGT 189
+ QI +G+ YL S +HRDL NI V ++ VKI D GLA +L + V
Sbjct: 120 YSSQICKGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVRE 176
Query: 190 PE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
P + APE + + ++ D++SFG+ + E+ T+
Sbjct: 177 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 214
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 18 DPT---GRYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERL 70
DPT R+ +Y LGKG +V Y + G VA Q++ + D +R
Sbjct: 16 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQR- 73
Query: 71 YCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKL 129
EI +LK L I+K+ +++ V E SG LR + +H+ R++ + L
Sbjct: 74 --EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 131
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGT 189
+ QI +G+ YL S +HRDL NI V ++ VKI D GLA +L + V
Sbjct: 132 YSSQICKGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVRE 188
Query: 190 PE-----FMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
P + APE + + ++ D++SFG+ + E+ T+
Sbjct: 189 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 226
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNI 85
+ LG GA V+ + G+E + D Q P +E++ EI +LK+L H NI
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTIN-KDRSQVP--MEQIEAEIEVLKSLDHPNI 82
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQ----YRLKHKRVNIRAVKLWCRQILRGLLYL 141
+K + + D N I V E G L + + + K ++ V +Q++ L Y
Sbjct: 83 IKIFEVFEDYHNMYI--VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 142 HSHDPPVIHRDLKCDNIFVNGN--QGEVKIGDLGLAAILRK-SHAAHCVGTPEFMAPEVY 198
HS V+H+DLK +NI +KI D GLA + + H+ + GT +MAPEV+
Sbjct: 141 HSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF 198
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYS 226
+ DI+S G+ + ++T P++
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTGCLPFT 226
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 16 EVDPT---GRYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLE 68
EVDPT R+ + LG+G V Y + G +VA +K DL+
Sbjct: 12 EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK 71
Query: 69 RLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAV 127
+ EI +L+ L H+NI+K+ + I + E SG+L++Y K+K ++N++
Sbjct: 72 K---EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ 128
Query: 128 KLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV 187
+ QI +G+ YL S +HRDL N+ V ++ +VKIGD GL + V
Sbjct: 129 LKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVE-SEHQVKIGDFGLTKAIETDKEXXTV 185
Query: 188 G----TPEFM-APE-VYEEAYNELVDIYSFGMCILEMVTF 221
+P F APE + + + D++SFG+ + E++T+
Sbjct: 186 KDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTY 225
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 25/281 (8%)
Query: 11 CSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERL 70
C+ F E Y + E LGKGA V R G E A + S D ++L
Sbjct: 6 CTRFTE-----EYQLFEE-LGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--SARDHQKL 57
Query: 71 YCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E + + LKH NI++ + S + + + F ++ T G L + + + +
Sbjct: 58 EREARICRLLKHPNIVRLHDSISEEGHHYLIF--DLVTGGELFEDIVAREYYSEADASHC 115
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNG--NQGEVKIGDLGLAAILRKSHAAH--C 186
+QIL +L H H V+HR+LK +N+ + VK+ D GLA + A
Sbjct: 116 IQQILEAVL--HCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF 173
Query: 187 VGTPEFMAPEVY-EEAYNELVDIYSFGMCILEMVTFEYP--YSECTHPAQIYKKVVSGKK 243
GTP +++PEV ++ Y + VD+++ G+ IL ++ YP + E H ++Y+++ +G
Sbjct: 174 AGTPGYLSPEVLRKDPYGKPVDLWACGV-ILYILLVGYPPFWDEDQH--RLYQQIKAGAY 230
Query: 244 --PDSLYRVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFL 281
P + PE + + K L S R++A E L P++
Sbjct: 231 DFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 15/211 (7%)
Query: 61 LQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK 120
+Q +E++Y EI +LK L H N++K D ++ V E+ G + + K
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-TLK 132
Query: 121 RVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK 180
++ + + + +++G+ YLH +IHRD+K N+ V G G +KI D G++ +
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLV-GEDGHIKIADFGVSNEFKG 189
Query: 181 SHA--AHCVGTPEFMAPEVYEEAY----NELVDIYSFGMCILEMVTFEYPYSE----CTH 230
S A ++ VGTP FMAPE E + +D+++ G+ + V + P+ + C H
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLH 249
Query: 231 PAQIYKKVVSGKKPDSLYRVKDPEVRRFVEK 261
+ + +PD +KD + R ++K
Sbjct: 250 SKIKSQALEFPDQPDIAEDLKD-LITRMLDK 279
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 18/228 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F S L+++ I +K + Q+L+GL + HSH
Sbjct: 67 KLLDV-IHTENK-LYLVFE-FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK +N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 124 R--VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 179
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
+ Y+ VDI+S G EMVT + + Q+++ + PD +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 227
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 20 TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLK 78
T RY EI G GA TVY+A D + G VA V++ + + P R + L+
Sbjct: 3 TSRYEPVAEI-GVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 79 TLKHKNIMKFY-TSWVDTANRNINFVTEMF--TSGTLRQYRLKHKRVNIRA--VKLWCRQ 133
+H N+++ +R I VT +F LR Y K + A +K RQ
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA-AHCVGTPEF 192
LRGL +LH++ ++HRDLK +NI V G VK+ D GLA I A A V T +
Sbjct: 121 FLRGLDFLHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALAPVVVTLWY 177
Query: 193 MAPEV-YEEAYNELVDIYSFGMCILEM 218
APEV + Y VD++S G EM
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 25/215 (11%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY ++ LG G + V+ A D VA ++ L D P+ ++ EI +++ L H
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD----PQSVKHALREIKIIRRLDH 67
Query: 83 KNIMKFYTSWVDTANR---NINFVTEMFTSGTLRQYR-------LKHKRVNIRAVKLWCR 132
NI+K + + ++ ++ +TE+ + +++Y L+ + +L+
Sbjct: 68 DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMY 127
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL-----RKSHAAHCV 187
Q+LRGL Y+HS + V+HRDLK N+F+N +KIGD GLA I+ K H + +
Sbjct: 128 QLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL 185
Query: 188 GTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVT 220
T + +P + Y + +D+++ G EM+T
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 220
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG G V++ + G+ +A KL P ++ E+ +L I+ FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
++ ++ I+ E G+L Q K R+ + + +++GL YL ++
Sbjct: 71 GAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA-YNELVDI 208
HRD+K NI VN ++GE+K+ D G++ L S A VGT +M+PE + Y+ DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 209 YSFGMCILEMVTFEYP 224
+S G+ ++EM YP
Sbjct: 187 WSMGLSLVEMAVGRYP 202
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 15/221 (6%)
Query: 69 RLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVK 128
R+ EI LK L+H +I+K Y V T +I V E + G L Y ++ KR+ +
Sbjct: 55 RVEREISYLKLLRHPHIIKLYD--VITTPTDIVMVIE-YAGGELFDYIVEKKRMTEDEGR 111
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC-V 187
+ +QI+ + Y H H ++HRDLK +N+ ++ N VKI D GL+ I+ +
Sbjct: 112 RFFQQIICAIEYCHRHK--IVHRDLKPENLLLDDNLN-VKIADFGLSNIMTDGNFLKTSC 168
Query: 188 GTPEFMAPEVYEEAY--NELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSG--KK 243
G+P + APEV VD++S G+ + M+ P+ + P ++KKV S
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-NLFKKVNSCVYVM 227
Query: 244 PDSLYRVKDPEVRRFVEKCLATVSLRLSARELLNDPFLQID 284
PD L +RR + +A R++ +E+ DP+ ++
Sbjct: 228 PDFLSPGAQSLIRRMI---VADPMQRITIQEIRRDPWFNVN 265
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG G V++ + G+ +A KL P ++ E+ +L I+ FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
++ ++ I+ E G+L Q K R+ + + +++GL YL ++
Sbjct: 71 GAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA-YNELVDI 208
HRD+K NI VN ++GE+K+ D G++ L S A VGT +M+PE + Y+ DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 209 YSFGMCILEMVTFEYP 224
+S G+ ++EM YP
Sbjct: 187 WSMGLSLVEMAVGRYP 202
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 134/273 (49%), Gaps = 18/273 (6%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ-SPEDLERLYCEIHLLKTLKHK 83
R + +GKG V A G EVA VK+ D Q + L++L+ E+ ++K L H
Sbjct: 10 RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
NI+K + V + + V E + G + Y + H + + + RQI+ + Y
Sbjct: 67 NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY--C 122
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVYE-EA 201
H ++HRDLK +N+ ++ + +KI D G + + G+P + APE+++ +
Sbjct: 123 HQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 181
Query: 202 YN-ELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE--VRRF 258
Y+ VD++S G+ + +V+ P+ + + ++ ++V+ GK Y D E +++F
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKF 240
Query: 259 VEKCLATVSLRLSARELLNDPFLQIDDCESNLR 291
+ + S R + +++ D ++ + + L+
Sbjct: 241 L---ILNPSKRGTLEQIMKDRWMNVGHEDDELK 270
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG G V++ + G+ +A KL P ++ E+ +L I+ FY
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 97
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
++ ++ I+ E G+L Q K R+ + + +++GL YL ++
Sbjct: 98 GAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 154
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA-YNELVDI 208
HRD+K NI VN ++GE+K+ D G++ L S A VGT +M+PE + Y+ DI
Sbjct: 155 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 213
Query: 209 YSFGMCILEMVTFEYP 224
+S G+ ++EM YP
Sbjct: 214 WSMGLSLVEMAVGRYP 229
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG G V++ + G+ +A KL P ++ E+ +L I+ FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
++ ++ I+ E G+L Q K R+ + + +++GL YL ++
Sbjct: 71 GAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA-YNELVDI 208
HRD+K NI VN ++GE+K+ D G++ L S A VGT +M+PE + Y+ DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 209 YSFGMCILEMVTFEYP 224
+S G+ ++EM YP
Sbjct: 187 WSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG G V++ + G+ +A KL P ++ E+ +L I+ FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
++ ++ I+ E G+L Q K R+ + + +++GL YL ++
Sbjct: 71 GAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA-YNELVDI 208
HRD+K NI VN ++GE+K+ D G++ L S A VGT +M+PE + Y+ DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 209 YSFGMCILEMVTFEYP 224
+S G+ ++EM YP
Sbjct: 187 WSMGLSLVEMAVGRYP 202
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 15/213 (7%)
Query: 22 RYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
+Y +G+G+ V A + I A ++ Y F+ ED++R EI ++K+L
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY-FV---EDVDRFKQEIEIMKSLD 64
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV--NIRAVKLWCRQILRGLL 139
H NI++ Y ++ D N +I V E+ T G L + R+ HKRV A ++ + +L +
Sbjct: 65 HPNIIRLYETFED--NTDIYLVMELCTGGELFE-RVVHKRVFRESDAARI-MKDVLSAVA 120
Query: 140 YLHSHDPPVIHRDLKCDN--IFVNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAPE 196
Y H + V HRDLK +N + +K+ D GLAA + VGTP +++P+
Sbjct: 121 YCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 178
Query: 197 VYEEAYNELVDIYSFGMCILEMVTFEYPYSECT 229
V E Y D +S G+ + ++ P+S T
Sbjct: 179 VLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPT 211
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 20/239 (8%)
Query: 19 PTGRYGRYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIH 75
P G + ++ +G+G VY+A ++ G VA +++L + P R EI
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EIS 57
Query: 76 LLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQ 133
LLK L H NI+K + T N+ + V E F S L+ + I +K + Q
Sbjct: 58 LLKELNHPNIVKLLDV-IHTENK-LYLVFE-FLSMDLKDFMDASALTGIPLPLIKSYLFQ 114
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTP 190
+L+GL + HSH V+HRDLK N+ +N +G +K+ D GLA + +++ H V T
Sbjct: 115 LLQGLAFCHSHR--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTL 170
Query: 191 EFMAPEVYE--EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
+ APE+ + Y+ VDI+S G EMVT + + Q+++ + PD +
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G+G+ V A + I A ++ Y F+ ED++R EI ++K+L H NI++ Y
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKY-FV---EDVDRFKQEIEIMKSLDHPNIIRLY 89
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV--NIRAVKLWCRQILRGLLYLHSHDPP 147
++ D N +I V E+ T G L + R+ HKRV A ++ + +L + Y H +
Sbjct: 90 ETFED--NTDIYLVMELCTGGELFE-RVVHKRVFRESDAARI-MKDVLSAVAYCHKLN-- 143
Query: 148 VIHRDLKCDN--IFVNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAPEVYEEAYNE 204
V HRDLK +N + +K+ D GLAA + VGTP +++P+V E Y
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGP 203
Query: 205 LVDIYSFGMCILEMVTFEYPYSECT 229
D +S G+ + ++ P+S T
Sbjct: 204 ECDEWSAGVMMYVLLCGYPPFSAPT 228
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 8/196 (4%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG G V + G+ +A KL P ++ E+ +L I+ FY
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMAR---KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 80
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
++ ++ I+ E G+L Q + KR+ + +LRGL YL ++
Sbjct: 81 GAFY--SDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ-IM 137
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA-YNELVDI 208
HRD+K NI VN ++GE+K+ D G++ L S A VGT +MAPE + Y+ DI
Sbjct: 138 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDI 196
Query: 209 YSFGMCILEMVTFEYP 224
+S G+ ++E+ YP
Sbjct: 197 WSMGLSLVELAVGRYP 212
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 12/218 (5%)
Query: 15 VEVDPTGRYG----RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERL 70
+ V+ + R G + +LGKG+ V A + G A +K D + +D+E
Sbjct: 12 IGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLK-KDVILQDDDVECT 70
Query: 71 YCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E +L ++ + T +R + FV E G L + K +R + + +
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDR-LFFVMEFVNGGDLMFHIQKSRRFDEARARFY 129
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVG 188
+I+ L++LH D +I+RDLK DN+ ++ ++G K+ D G+ I A G
Sbjct: 130 AAEIISALMFLH--DKGIIYRDLKLDNVLLD-HEGHCKLADFGMCKEGICNGVTTATFCG 186
Query: 189 TPEFMAPEVYEEA-YNELVDIYSFGMCILEMVTFEYPY 225
TP+++APE+ +E Y VD ++ G+ + EM+ P+
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 67
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F S L+ + I +K + Q+L+GL + HSH
Sbjct: 68 KLLDV-IHTENK-LYLVFE-FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 125 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 180
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
+ Y+ VDI+S G EMVT + + Q+++ + PD +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 228
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 125/262 (47%), Gaps = 18/262 (6%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
EILG G V++ + G+++A +K + +D E + EI ++ L H N+++
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKT----RGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVK--LWCRQILRGLLYLHSHD 145
Y ++ + +I V E G L R+ + N+ + L+ +QI G+ H H
Sbjct: 151 LYDAF--ESKNDIVLVMEYVDGGELFD-RIIDESYNLTELDTILFMKQICEGIR--HMHQ 205
Query: 146 PPVIHRDLKCDNIF-VNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAPEVYEEAYN 203
++H DLK +NI VN + ++KI D GLA + GTPEF+APEV +
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFV 265
Query: 204 EL-VDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK--KPDSLYRVKDPEVRRFVE 260
D++S G+ +++ P+ + A+ +++ + D ++ E + F+
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFL-GDNDAETLNNILACRWDLEDEEFQDISEEAKEFIS 324
Query: 261 KCLAT-VSLRLSARELLNDPFL 281
K L S R+SA E L P+L
Sbjct: 325 KLLIKEKSWRISASEALKHPWL 346
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 72
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 73 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVY--E 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 130 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILLGX 185
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVT 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 67
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 68 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK +N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 125 R--VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 180
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVT 201
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 20 TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLK 78
T RY EI G GA TVY+A D + G VA V++ + + P R + L+
Sbjct: 3 TSRYEPVAEI-GVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 79 TLKHKNIMKFY-TSWVDTANRNINFVTEMF--TSGTLRQYRLKHKRVNIRA--VKLWCRQ 133
+H N+++ +R I VT +F LR Y K + A +K RQ
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEF 192
LRGL +LH++ ++HRDLK +NI V G VK+ D GLA I A V T +
Sbjct: 121 FLRGLDFLHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALFPVVVTLWY 177
Query: 193 MAPEV-YEEAYNELVDIYSFGMCILEM 218
APEV + Y VD++S G EM
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 18/228 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 67 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK +N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 124 R--VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 179
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
+ Y+ VDI+S G EMVT + + Q+++ + PD +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 227
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 20 TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLK 78
T RY EI G GA TVY+A D + G VA V++ + + P R + L+
Sbjct: 3 TSRYEPVAEI-GVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 79 TLKHKNIMKFY-TSWVDTANRNINFVTEMF--TSGTLRQYRLKHKRVNIRA--VKLWCRQ 133
+H N+++ +R I VT +F LR Y K + A +K RQ
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEF 192
LRGL +LH++ ++HRDLK +NI V G VK+ D GLA I A V T +
Sbjct: 121 FLRGLDFLHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALDPVVVTLWY 177
Query: 193 MAPEV-YEEAYNELVDIYSFGMCILEM 218
APEV + Y VD++S G EM
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 66 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVY--E 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILLGX 178
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 72
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 73 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 130 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILLGC 185
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVT 206
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 17 VDPT---GRYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLER 69
VDPT R+ + LG+G V Y + G +VA +K DL++
Sbjct: 1 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK 60
Query: 70 LYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVK 128
EI +L+ L H+NI+K+ + I + E SG+L++Y K+K ++N++
Sbjct: 61 ---EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL 117
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVG 188
+ QI +G+ YL S +HRDL N+ V ++ +VKIGD GL + V
Sbjct: 118 KYAVQICKGMDYLGSRQ--YVHRDLAARNVLVE-SEHQVKIGDFGLTKAIETDKEXXTVK 174
Query: 189 ----TPEFM-APE-VYEEAYNELVDIYSFGMCILEMVTF 221
+P F APE + + + D++SFG+ + E++T+
Sbjct: 175 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTY 213
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 20 TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS----PEDLERLYCEIH 75
T RY EI G GA TVY+A D + G VA V++ + P R +
Sbjct: 8 TSRYEPVAEI-GVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 76 LLKTLKHKNIMKFY-TSWVDTANRNINFVTEMF--TSGTLRQYRLKHKRVNIRA--VKLW 130
L+ +H N+++ +R I VT +F LR Y K + A +K
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 125
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA-AHCVGT 189
RQ LRGL +LH++ ++HRDLK +NI V G VK+ D GLA I A V T
Sbjct: 126 MRQFLRGLDFLHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALTPVVVT 182
Query: 190 PEFMAPEV-YEEAYNELVDIYSFGMCILEM 218
+ APEV + Y VD++S G EM
Sbjct: 183 LWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 69
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 70 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 127 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILLGC 182
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
+ Y+ VDI+S G EMVT + + Q+++ + PD +
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 230
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 20/212 (9%)
Query: 19 PTGRYGRYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIH 75
P G + ++ +G+G VY+A ++ G VA +++L + P R EI
Sbjct: 2 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EIS 58
Query: 76 LLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQ 133
LLK L H NI+K + T N+ + V E F L+++ I +K + Q
Sbjct: 59 LLKELNHPNIVKLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTP 190
+L+GL + HSH V+HRDLK N+ +N +G +K+ D GLA + +++ H V T
Sbjct: 116 LLQGLAFCHSHR--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTL 171
Query: 191 EFMAPEVYE--EAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y+ VDI+S G EMVT
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 20/212 (9%)
Query: 19 PTGRYGRYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIH 75
P G + ++ +G+G VY+A ++ G VA +++L + P R EI
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EIS 57
Query: 76 LLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQ 133
LLK L H NI+K + T N+ + V E F L+++ I +K + Q
Sbjct: 58 LLKELNHPNIVKLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTP 190
+L+GL + HSH V+HRDLK N+ +N +G +K+ D GLA + +++ H V T
Sbjct: 115 LLQGLAFCHSHR--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTL 170
Query: 191 EFMAPEVYE--EAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y+ VDI+S G EMVT
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 15/219 (6%)
Query: 15 VEVDPTGRYGRYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC 72
+ +D R RY ++ LG+G TVY+A D+ VA ++KL ++ + + R
Sbjct: 1 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 73 -EIHLLKTLKHKNIMKFYTSWVDTANRNINF-VTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
EI LL+ L H NI+ ++ +N ++ F E ++ L +I+A L
Sbjct: 61 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYML- 119
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA--HCVG 188
L+GL YLH H ++HRDLK +N+ ++ N G +K+ D GLA + A H V
Sbjct: 120 --MTLQGLEYLHQHW--ILHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 189 TPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPY 225
T + APE+ A Y VD+++ G CIL + P+
Sbjct: 175 TRWYRAPELLFGARMYGVGVDMWAVG-CILAELLLRVPF 212
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 68
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 69 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 126 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 181
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVT 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 67 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 124 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILLGC 179
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
+ Y+ VDI+S G EMVT + + Q+++ + PD +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 227
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 22 RYGRYNEILGKGASKTV----YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL 77
R+ +Y LGKG +V Y + G VA Q++ + D +R EI +L
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQR---EIQIL 62
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILR 136
K L I+K+ + V E SG LR + +H+ R++ + L+ QI +
Sbjct: 63 KALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 122
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPE----- 191
G+ YL S +HRDL NI V ++ VKI D GLA +L V P
Sbjct: 123 GMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF 179
Query: 192 FMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ APE + + ++ D++SFG+ + E+ T+
Sbjct: 180 WYAPESLSDNIFSRQSDVWSFGVVLYELFTY 210
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 66 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILLGC 178
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 65 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 122 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILLGC 177
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 67
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 68 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 125 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 180
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVT 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 66 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 178
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
+ Y+ VDI+S G EMVT + + Q+++ + PD +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 67
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 68 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 125 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 180
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVT 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 67 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 124 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 179
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVT 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 66 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 178
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 66 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 178
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 66 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILLGC 178
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 65 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 122 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILLGC 177
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 66 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 178
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 65 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 122 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 177
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 114/251 (45%), Gaps = 29/251 (11%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY ++ +G GA V AFD GI VA KL Q+ +R Y E+ LLK + H
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + L H+R++ ++ C
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC----- 135
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP-----E 191
G+ +LHS +IHRDLK NI V + +KI D GLA ++ + + + TP
Sbjct: 136 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTASTNFMMTPYVVTRY 188
Query: 192 FMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRV 250
+ APEV Y E VDI+S G + E+V + H Q K + P + +
Sbjct: 189 YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMA 248
Query: 251 K-DPEVRRFVE 260
P VR +VE
Sbjct: 249 ALQPTVRNYVE 259
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 67 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 124 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 179
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+ + I +K + Q+L+GL + HSH
Sbjct: 66 KLLDV-IHTENK-LYLVFE-FLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK +N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 123 R--VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 178
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
+ Y+ VDI+S G EMVT + + Q+++ + PD +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 65 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 122 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 177
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 66 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILLGC 178
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
+ Y+ VDI+S G EMVT + + Q+++ + PD +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 65 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 122 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILLGC 177
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
+ Y+ VDI+S G EMVT + + Q+++ + PD +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 225
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 30/229 (13%)
Query: 9 PDCSEFVEVDPTGRYGRYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPED 66
P E V+ P RY ++ +G+GA V A+D VA ++ ++
Sbjct: 28 PGEVEMVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFE------- 80
Query: 67 LERLYC-----EIHLLKTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLK 118
+ YC EI +L +H+N++ + A R++ V ++ + + LK
Sbjct: 81 -HQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKL--LK 137
Query: 119 HKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL 178
++++ + + QILRGL Y+HS + V+HRDLK N+ +N ++KI D GLA I
Sbjct: 138 SQQLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLIN-TTCDLKICDFGLARIA 194
Query: 179 RKSH-----AAHCVGTPEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
H V T + APE+ + Y + +DI+S G + EM++
Sbjct: 195 DPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 19/264 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LGKGA V R + E A + S D ++L E + + LKH NI++
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL--SARDHQKLEREARICRLLKHPNIVR 94
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPP 147
+ S + + F ++ T G L + + + + QIL + ++H HD
Sbjct: 95 LHDSISEEGFHYLVF--DLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD-- 150
Query: 148 VIHRDLKCDNIFVNG--NQGEVKIGDLGLAAILRKSHAAH--CVGTPEFMAPEVY-EEAY 202
++HRDLK +N+ + VK+ D GLA ++ A GTP +++PEV ++ Y
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPY 210
Query: 203 NELVDIYSFGMCILEMVTFEYP--YSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRRF 258
+ VDI++ G+ IL ++ YP + E H ++Y+++ +G P + PE +
Sbjct: 211 GKPVDIWACGV-ILYILLVGYPPFWDEDQH--KLYQQIKAGAYDFPSPEWDTVTPEAKNL 267
Query: 259 VEKCLAT-VSLRLSARELLNDPFL 281
+ + L + R++A + L P++
Sbjct: 268 INQMLTINPAKRITADQALKHPWV 291
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 68
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+ + I +K + Q+L+GL + HSH
Sbjct: 69 KLLDV-IHTENK-LYLVFE-FLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 126 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 181
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVT 202
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 16/227 (7%)
Query: 22 RYGRY--NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDF--LQSPEDLERLYCEIHLL 77
+ G Y + LG G V E G +VA VK+ + ++S + + ++ EI L
Sbjct: 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVA---VKILNRQKIRSLDVVGKIRREIQNL 70
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRG 137
K +H +I+K Y V + +I V E + G L Y K+ R++ + + +QIL G
Sbjct: 71 KLFRHPHIIKLYQ--VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSG 128
Query: 138 LLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAPE 196
+ Y H H V+HRDLK +N+ ++ + KI D GL+ ++ G+P + APE
Sbjct: 129 VDYCHRH--MVVHRDLKPENVLLDAHMN-AKIADFGLSNMMSDGEFLRXSCGSPNYAAPE 185
Query: 197 VYEEAY--NELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSG 241
V VDI+S G+ + ++ P+ + H ++KK+ G
Sbjct: 186 VISGRLYAGPEVDIWSSGVILYALLCGTLPFDD-DHVPTLFKKICDG 231
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E F L+++ I +K + Q+L+GL + HSH
Sbjct: 66 KLLDV-IHTENK-LYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 123 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILLGC 178
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 23/252 (9%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLY---CEIHLLKTLKH 82
Y + +GKG V++ + VA + L D E +E+ E+ ++ L H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIR-AVKL-WCRQILRGLLY 140
NI+K Y + V E G L +RL K I+ +VKL I G+ Y
Sbjct: 83 PNIVKLY----GLMHNPPRMVMEFVPCGDL-YHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 141 LHSHDPPVIHRDLKCDNIFVNGNQGE----VKIGDLGLAAILRKSHA-AHCVGTPEFMAP 195
+ + +PP++HRDL+ NIF+ K+ D GL+ + H+ + +G ++MAP
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAP 195
Query: 196 EVY---EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVV--SGKKPDSLYRV 250
E EE+Y E D YSF M + ++T E P+ E ++ + ++ G +P ++
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP-TIPED 254
Query: 251 KDPEVRRFVEKC 262
P +R +E C
Sbjct: 255 CPPRLRNVIELC 266
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +K+ + P+ E ++ ++ H
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVA---IKILNETTGPKANVEFMDEALIMASMDHP 100
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLH 142
++++ + I VT++ G L +Y +HK + + + WC QI +G++YL
Sbjct: 101 HLVRLLGV---CLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 143 SHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL---RKSHAAHCVGTP-EFMAPE-V 197
++HRDL N+ V + VKI D GLA +L K + A P ++MA E +
Sbjct: 158 ERR--LVHRDLAARNVLVK-SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 198 YEEAYNELVDIYSFGMCILEMVTF 221
+ + D++S+G+ I E++TF
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMTF 238
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +K+ + P+ E ++ ++ H
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVA---IKILNETTGPKANVEFMDEALIMASMDHP 77
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLH 142
++++ + I VT++ G L +Y +HK + + + WC QI +G++YL
Sbjct: 78 HLVRLLGV---CLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 143 SHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL---RKSHAAHCVGTP-EFMAPE-V 197
++HRDL N+ V + VKI D GLA +L K + A P ++MA E +
Sbjct: 135 ERR--LVHRDLAARNVLVK-SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 198 YEEAYNELVDIYSFGMCILEMVTF 221
+ + D++S+G+ I E++TF
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTF 215
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S A GT +++ PE+ E ++E VD+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 248
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 249 SQRPMLREVLEHPWI 263
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRG 137
++L+H NI++F V ++ V E + G L + R + + + +Q++ G
Sbjct: 70 RSLRHPNIVRF--KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 138 LLYLHSHDPPVIHRDLKCDNIFVNGNQG-EVKIGDLGLA-AILRKSHAAHCVGTPEFMAP 195
+ Y H+ V HRDLK +N ++G+ +KI D G + A + S VGTP ++AP
Sbjct: 128 VSYAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAP 185
Query: 196 EVY--EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV-----VSGKKPDSLY 248
EV +E ++ D++S G+ + M+ YP+ + P K + V PD ++
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 245
Query: 249 RVKDPEVRRFVEKC-LATVSLRLSARELLN 277
PE R + + +A + R+S E+ N
Sbjct: 246 --ISPECRHLISRIFVADPAKRISIPEIRN 273
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 42 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 100
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 101 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 156
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 157 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 215
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 216 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 271
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 272 SQRPMLREVLEHPWI 286
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 127/260 (48%), Gaps = 16/260 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLE-RLYCEIHLLKTLKHKNIMKF 88
LG+G+ V A+ G +VA + +S D++ R+ EI L+ L+H +I+K
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS--DMQGRIEREISYLRLLRHPHIIKL 79
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPV 148
Y V + I V E + L Y ++ +++ + + + +QI+ + Y H H +
Sbjct: 80 YD--VIKSKDEIIMVIE-YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--I 134
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAPEVYEEAY--NEL 205
+HRDLK +N+ ++ VKI D GL+ I+ + G+P + APEV
Sbjct: 135 VHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 193
Query: 206 VDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT 265
VD++S G+ + M+ P+ + + P ++K + +G +L + P +++ L
Sbjct: 194 VDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVY--TLPKFLSPGAAGLIKRMLIV 250
Query: 266 VSL-RLSARELLNDPFLQID 284
L R+S E++ D + ++D
Sbjct: 251 NPLNRISIHEIMQDDWFKVD 270
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 132/264 (50%), Gaps = 20/264 (7%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNI 85
+ +++GKG+ V A + E + A ++ L+ E+ + LLK +KH +
Sbjct: 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL 101
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA-VKLWCRQILRGLLYLHSH 144
+ + S+ TA++ + FV + G L Y L+ +R + + + +I L YLHS
Sbjct: 102 VGLHFSF-QTADK-LYFVLDYINGGELF-YHLQRERCFLEPRARFYAAEIASALGYLHSL 158
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA--ILRKSHAAHCVGTPEFMAPEV-YEEA 201
+ +++RDLK +NI ++ +QG + + D GL I S + GTPE++APEV +++
Sbjct: 159 N--IVYRDLKPENILLD-SQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 202 YNELVDIYSFGMCILEMVTFEYP-YSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVE 260
Y+ VD + G + EM+ P YS T A++Y +++ KP L R +E
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMYDNILN--KPLQLKPNITNSARHLLE 271
Query: 261 KCLAT-VSLRLSARELLNDPFLQI 283
L + RL A+ D F++I
Sbjct: 272 GLLQKDRTKRLGAK----DDFMEI 291
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 127/260 (48%), Gaps = 16/260 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLE-RLYCEIHLLKTLKHKNIMKF 88
LG+G+ V A+ G +VA + +S D++ R+ EI L+ L+H +I+K
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS--DMQGRIEREISYLRLLRHPHIIKL 78
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPV 148
Y V + I V E + L Y ++ +++ + + + +QI+ + Y H H +
Sbjct: 79 YD--VIKSKDEIIMVIE-YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--I 133
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAPEVYEEAY--NEL 205
+HRDLK +N+ ++ VKI D GL+ I+ + G+P + APEV
Sbjct: 134 VHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 192
Query: 206 VDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT 265
VD++S G+ + M+ P+ + + P ++K + +G +L + P +++ L
Sbjct: 193 VDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVY--TLPKFLSPGAAGLIKRMLIV 249
Query: 266 VSL-RLSARELLNDPFLQID 284
L R+S E++ D + ++D
Sbjct: 250 NPLNRISIHEIMQDDWFKVD 269
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 127/260 (48%), Gaps = 16/260 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLE-RLYCEIHLLKTLKHKNIMKF 88
LG+G+ V A+ G +VA + +S D++ R+ EI L+ L+H +I+K
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS--DMQGRIEREISYLRLLRHPHIIKL 73
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPV 148
Y V + I V E + L Y ++ +++ + + + +QI+ + Y H H +
Sbjct: 74 YD--VIKSKDEIIMVIE-YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--I 128
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAPEVYEEAY--NEL 205
+HRDLK +N+ ++ VKI D GL+ I+ + G+P + APEV
Sbjct: 129 VHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 187
Query: 206 VDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT 265
VD++S G+ + M+ P+ + + P ++K + +G +L + P +++ L
Sbjct: 188 VDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVY--TLPKFLSPGAAGLIKRMLIV 244
Query: 266 VSL-RLSARELLNDPFLQID 284
L R+S E++ D + ++D
Sbjct: 245 NPLNRISIHEIMQDDWFKVD 264
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 42 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 100
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 101 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 156
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 157 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDL 215
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 216 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 271
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 272 SQRPMLREVLEHPWI 286
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 68
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E L+++ I +K + Q+L+GL + HSH
Sbjct: 69 KLLDV-IHTENK-LYLVFE-HVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 126 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-XHEVVTLWYRAPEILLGC 181
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
+ Y+ VDI+S G EMVT + + Q+++ + PD +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 20 TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKT 79
T Y + E LGKGA V R G E A + S D ++L E + +
Sbjct: 3 TDEYQLFEE-LGKGAFSVVRRCMKIPTGQEYAAKIINTKKL--SARDHQKLEREARICRL 59
Query: 80 LKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLL 139
LKH NI++ + S + + F ++ T G L + + + + +QIL +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVF--DLVTGGELFEDIVAREYYSEADASHCIQQILESV- 116
Query: 140 YLHSHDPPVIHRDLKCDNIFV--NGNQGEVKIGDLGLAAILRKSHAAH--CVGTPEFMAP 195
H H ++HRDLK +N+ + VK+ D GLA ++ A GTP +++P
Sbjct: 117 -NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
Query: 196 EVY-EEAYNELVDIYSFGMCILEMVTFEYP--YSECTHPAQIYKKVVSGKK--PDSLYRV 250
EV ++ Y + VD+++ G+ IL ++ YP + E H ++Y+++ +G P +
Sbjct: 176 EVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQH--RLYQQIKAGAYDFPSPEWDT 232
Query: 251 KDPEVRRFVEKCLAT-VSLRLSARELLNDPFL 281
PE + + K L + R++A E L P++
Sbjct: 233 VTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 127/260 (48%), Gaps = 16/260 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLE-RLYCEIHLLKTLKHKNIMKF 88
LG+G+ V A+ G +VA + +S D++ R+ EI L+ L+H +I+K
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS--DMQGRIEREISYLRLLRHPHIIKL 69
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPV 148
Y V + I V E + L Y ++ +++ + + + +QI+ + Y H H +
Sbjct: 70 YD--VIKSKDEIIMVIE-YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--I 124
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAPEVYEEAY--NEL 205
+HRDLK +N+ ++ VKI D GL+ I+ + G+P + APEV
Sbjct: 125 VHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 183
Query: 206 VDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT 265
VD++S G+ + M+ P+ + + P ++K + +G +L + P +++ L
Sbjct: 184 VDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVY--TLPKFLSPGAAGLIKRMLIV 240
Query: 266 VSL-RLSARELLNDPFLQID 284
L R+S E++ D + ++D
Sbjct: 241 NPLNRISIHEIMQDDWFKVD 260
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 13/261 (4%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A + +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 20 LGKGKFGNVYLARERQSKFILAL-KVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K R + + + ++ L Y HS VI
Sbjct: 79 GYFHDATR--VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR--VI 134
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 135 HRDIKPENLLL-GSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 193
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + P+ T+ + Y+++ V PD + + R ++
Sbjct: 194 WSLGVLCYEFLVGMPPFEAHTY-QETYRRISRVEFTFPDFVTEGARDLISRLLKH---NA 249
Query: 267 SLRLSARELLNDPFLQIDDCE 287
S RL+ E+L P+++ + +
Sbjct: 250 SQRLTLAEVLEHPWIKANSSK 270
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 132/285 (46%), Gaps = 38/285 (13%)
Query: 23 YGRYN--EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLY----CEIHL 76
Y +Y+ +++G+G S V R G E A +++ SPE LE + E H+
Sbjct: 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHI 152
Query: 77 LKTLK-HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQIL 135
L+ + H +I+ S+ ++ + V ++ G L Y + ++ + + R +L
Sbjct: 153 LRQVAGHPHIITLIDSY--ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLL 210
Query: 136 RGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMA 194
+ +LH+++ ++HRDLK +NI ++ N ++++ D G + L GTP ++A
Sbjct: 211 EAVSFLHANN--IVHRDLKPENILLDDNM-QIRLSDFGFSCHLEPGEKLRELCGTPGYLA 267
Query: 195 PEVYE-------EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQI--YKKVVSGKKPD 245
PE+ + Y + VD+++ G+ + ++ P+ H QI + ++ G+
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF---WHRRQILMLRMIMEGQ--- 321
Query: 246 SLYRVKDPE-------VRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
Y+ PE V+ + + L RL+A + L PF +
Sbjct: 322 --YQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 245
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 246 SQRPMLREVLEHPWI 260
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 33 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 91
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 92 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 147
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 148 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 206
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 207 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 262
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 263 SQRPMLREVLEHPWI 277
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 15/221 (6%)
Query: 76 LLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQIL 135
LL+ +H NI+ + D +++ VTE+ G L L+ K + R I
Sbjct: 74 LLRYGQHPNIITLKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG 131
Query: 136 RGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLAAILRKSHAAHCVG--TP 190
+ + YLHS V+HRDLK NI +GN ++I D G A LR + T
Sbjct: 132 KTVEYLHSQG--VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA 189
Query: 191 EFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSE--CTHPAQIYKKVVSGKKPDSL 247
F+APEV + + Y+E DI+S G+ + M+ P++ P +I ++ SGK S
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSG 249
Query: 248 --YRVKDPEVRRFVEKCL-ATVSLRLSARELLNDPFLQIDD 285
+ + V K L RL+A+++L P++ D
Sbjct: 250 GNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKD 290
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 23/252 (9%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLY---CEIHLLKTLKH 82
Y + +GKG V++ + VA + L D E +E+ E+ ++ L H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIR-AVKL-WCRQILRGLLY 140
NI+K Y + V E G L +RL K I+ +VKL I G+ Y
Sbjct: 83 PNIVKLY----GLMHNPPRMVMEFVPCGDL-YHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 141 LHSHDPPVIHRDLKCDNIFVNGNQGE----VKIGDLGLAAILRKSHA-AHCVGTPEFMAP 195
+ + +PP++HRDL+ NIF+ K+ D G + + H+ + +G ++MAP
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQWMAP 195
Query: 196 EVY---EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVV--SGKKPDSLYRV 250
E EE+Y E D YSF M + ++T E P+ E ++ + ++ G +P ++
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP-TIPED 254
Query: 251 KDPEVRRFVEKC 262
P +R +E C
Sbjct: 255 CPPRLRNVIELC 266
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S A GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 245
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 246 SQRPMLREVLEHPWI 260
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA----AHC--V 187
I++ L +LHS VIHRD+K N+ +N G+VK+ D G++ L S A A C
Sbjct: 162 IVKALEHLHSKLS-VIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDSVAKTIDAGCKPY 219
Query: 188 GTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
PE + PE+ ++ Y+ DI+S G+ ++E+ +PY P Q K+VV P
Sbjct: 220 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP 279
Query: 248 YRVKDPEVRRFVEKCLATVSL-RLSARELLNDPFLQI 283
E F +CL S R + EL+ PF +
Sbjct: 280 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 316
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 16 LGKGKFGNVYLAREKNSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D+ + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 75 GYFHDSTR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK--VI 130
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S A GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ YK++ V PD + + R ++
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTY-QDTYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 245
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 246 SQRPMLREVLEHPWI 260
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 16/197 (8%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG+G TVY+ + VA +++L +P R E+ LLK LKH NI+ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR---EVSLLKDLKHANIVTLH 66
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLK-HKRVNIRAVKLWCRQILRGLLYLHSHDPPV 148
+ +++ V E + L+QY +N+ VKL+ Q+LRGL Y H V
Sbjct: 67 D--IIHTEKSLTLVFE-YLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK--V 121
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYEEA--YN 203
+HRDLK N+ +N +GE+K+ D GLA +I K++ V T + P++ + Y+
Sbjct: 122 LHRDLKPQNLLIN-ERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYS 179
Query: 204 ELVDIYSFGMCILEMVT 220
+D++ G EM T
Sbjct: 180 TQIDMWGVGCIFYEMAT 196
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G GA +V A D+ G +VA KL QS +R Y E+ LLK ++H+N++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 90 TSWVDTAN-RNI-NFVTEM-FTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
+ ++ RN +F M F L+ ++ + + ++ Q+L+GL Y+HS
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQ--KIMGLKFSEEKIQYLVYQMLKGLKYIHSAG- 146
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA--YNE 204
V+HRDLK N+ VN + E+KI D GLA + V T + APEV YN+
Sbjct: 147 -VVHRDLKPGNLAVNED-CELKILDFGLARHADAEMTGYVV-TRWYRAPEVILSWMHYNQ 203
Query: 205 LVDIYSFGMCILEMVT 220
VDI+S G + EM+T
Sbjct: 204 TVDIWSVGCIMAEMLT 219
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 86/165 (52%), Gaps = 10/165 (6%)
Query: 66 DLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIR 125
++ ++ E+ +++ L+H ++ + S+ D ++ V ++ G LR + ++
Sbjct: 58 EVRNVFKELQIMQGLEHPFLVNLWYSFQD--EEDMFMVVDLLLGGDLRYHLQQNVHFKEE 115
Query: 126 AVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL-RKSHAA 184
VKL+ +++ L YL + +IHRD+K DNI ++ G V I D +AA+L R++
Sbjct: 116 TVKLFICELVMALDYLQNQR--IIHRDMKPDNILLD-EHGHVHITDFNIAAMLPRETQIT 172
Query: 185 HCVGTPEFMAPEVYEE----AYNELVDIYSFGMCILEMVTFEYPY 225
GT +MAPE++ Y+ VD +S G+ E++ PY
Sbjct: 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 245
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 246 SQRPMLREVLEHPWI 260
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 13/261 (4%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A + +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 20 LGKGKFGNVYLARERQSKFILAL-KVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K R + + + ++ L Y HS VI
Sbjct: 79 GYFHDATR--VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR--VI 134
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 135 HRDIKPENLLL-GSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDL 193
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + P+ T+ + Y+++ V PD + + R ++
Sbjct: 194 WSLGVLCYEFLVGMPPFEAHTY-QETYRRISRVEFTFPDFVTEGARDLISRLLKH---NA 249
Query: 267 SLRLSARELLNDPFLQIDDCE 287
S RL+ E+L P+++ + +
Sbjct: 250 SQRLTLAEVLEHPWIKANSSK 270
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 20 TGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKT 79
T Y + E LGKGA V R G E A + S D ++L E + +
Sbjct: 3 TDEYQLFEE-LGKGAFSVVRRCMKIPTGQEYAAKIINTKKL--SARDHQKLEREARICRL 59
Query: 80 LKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLL 139
LKH NI++ + S + + F ++ T G L + + + + +QIL +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVF--DLVTGGELFEDIVAREYYSEADASHCIQQILESV- 116
Query: 140 YLHSHDPPVIHRDLKCDNIFV--NGNQGEVKIGDLGLAAILRKSHAAH--CVGTPEFMAP 195
H H ++HRDLK +N+ + VK+ D GLA ++ A GTP +++P
Sbjct: 117 -NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
Query: 196 EVY-EEAYNELVDIYSFGMCILEMVTFEYP--YSECTHPAQIYKKVVSGKK--PDSLYRV 250
EV ++ Y + VD+++ G+ IL ++ YP + E H ++Y+++ +G P +
Sbjct: 176 EVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQH--RLYQQIKAGAYDFPSPEWDT 232
Query: 251 KDPEVRRFVEKCLAT-VSLRLSARELLNDPFL 281
PE + + K L + R++A E L P++
Sbjct: 233 VTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G GA +V A D+ G +VA KL QS +R Y E+ LLK ++H+N++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 90 TSWVDTAN-RNI-NFVTEM-FTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
+ ++ RN +F M F L+ ++ + ++ Q+L+GL Y+HS
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQ--KIMGMEFSEEKIQYLVYQMLKGLKYIHSAG- 164
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA--YNE 204
V+HRDLK N+ VN + E+KI D GLA + V T + APEV YN+
Sbjct: 165 -VVHRDLKPGNLAVNED-CELKILDFGLARHADAEMTGYVV-TRWYRAPEVILSWMHYNQ 221
Query: 205 LVDIYSFGMCILEMVT 220
VDI+S G + EM+T
Sbjct: 222 TVDIWSVGCIMAEMLT 237
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 23/252 (9%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLY---CEIHLLKTLKH 82
Y + +GKG V++ + VA + L D E +E+ E+ ++ L H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIR-AVKL-WCRQILRGLLY 140
NI+K Y + V E G L +RL K I+ +VKL I G+ Y
Sbjct: 83 PNIVKLY----GLMHNPPRMVMEFVPCGDL-YHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 141 LHSHDPPVIHRDLKCDNIFVNGNQGE----VKIGDLGLAAILRKSHA-AHCVGTPEFMAP 195
+ + +PP++HRDL+ NIF+ K+ D L+ + H+ + +G ++MAP
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQWMAP 195
Query: 196 EVY---EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVV--SGKKPDSLYRV 250
E EE+Y E D YSF M + ++T E P+ E ++ + ++ G +P ++
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP-TIPED 254
Query: 251 KDPEVRRFVEKC 262
P +R +E C
Sbjct: 255 CPPRLRNVIELC 266
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 15/221 (6%)
Query: 76 LLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQIL 135
LL+ +H NI+ + D +++ VTE+ G L L+ K + R I
Sbjct: 74 LLRYGQHPNIITLKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG 131
Query: 136 RGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLAAILRKSHAAHCVG--TP 190
+ + YLHS V+HRDLK NI +GN ++I D G A LR + T
Sbjct: 132 KTVEYLHSQG--VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA 189
Query: 191 EFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSE--CTHPAQIYKKVVSGKKPDSL 247
F+APEV + + Y+E DI+S G+ + M+ P++ P +I ++ SGK S
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSG 249
Query: 248 --YRVKDPEVRRFVEKCL-ATVSLRLSARELLNDPFLQIDD 285
+ + V K L RL+A+++L P++ D
Sbjct: 250 GNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKD 290
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G TV++A + VA +V+L D + P R EI LLK LKHKNI+
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR---EICLLKELKHKNIV 64
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
+ + V +++ + V E + + + ++ VK + Q+L+GL + HS +
Sbjct: 65 RLHD--VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYEEA-- 201
V+HRDLK N+ +N N GE+K+ D GLA I + ++A V T + P+V A
Sbjct: 122 -VLHRDLKPQNLLINRN-GELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKL 178
Query: 202 YNELVDIYSFGMCILEMVTFEYP 224
Y+ +D++S G E+ P
Sbjct: 179 YSTSIDMWSAGCIFAELANAARP 201
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 80 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 250
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 251 SQRPMLREVLEHPWI 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 18 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 76
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 77 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 132
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 133 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDL 191
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 247
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 248 SQRPMLREVLEHPWI 262
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 111/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVVAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTS--GTLRQYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ Q+L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLV 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G+ + EM+ + H Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRTYVE 261
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 80 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 250
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 251 SQRPMLREVLEHPWI 265
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A ++ G VA +++L + P R EI LLK L H NI+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA--VKLWCRQILRGLLYLHSH 144
K + T N+ + V E L+ + I +K + Q+L+GL + HSH
Sbjct: 65 KLLDV-IHTENK-LYLVFE-HVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYE-- 199
V+HRDLK N+ +N +G +K+ D GLA + +++ H V T + APE+
Sbjct: 122 R--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILLGC 177
Query: 200 EAYNELVDIYSFGMCILEMVT 220
+ Y+ VDI+S G EMVT
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 76 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 131
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 132 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 190
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 246
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 247 SQRPMLREVLEHPWI 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 245
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 246 SQRPMLREVLEHPWI 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 80 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE E ++E VD+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDL 194
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 250
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 251 SQRPXLREVLEHPWI 265
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 248
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 249 SQRPMLREVLEHPWI 263
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 245
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 246 SQRPMLREVLEHPWI 260
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 28/209 (13%)
Query: 99 NINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNI 158
++F+ ++ G L + +H + ++ + +I+ GL H H+ V++RDLK NI
Sbjct: 266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANI 323
Query: 159 FVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEE--AYNELVDIYSFGMCIL 216
++ G V+I DLGLA K VGT +MAPEV ++ AY+ D +S G +
Sbjct: 324 LLD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 217 EMVTFEYPY----SECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT-VSLRL- 270
+++ P+ ++ H ++ + PDS PE+R +E L V+ RL
Sbjct: 383 KLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF----SPELRSLLEGLLQRDVNRRLG 438
Query: 271 ----SARELLNDPFLQIDDCESNLRSLDY 295
A+E+ PF RSLD+
Sbjct: 439 CLGRGAQEVKESPF---------FRSLDW 458
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 28/209 (13%)
Query: 99 NINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNI 158
++F+ ++ G L + +H + ++ + +I+ GL H H+ V++RDLK NI
Sbjct: 265 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANI 322
Query: 159 FVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEE--AYNELVDIYSFGMCIL 216
++ G V+I DLGLA K VGT +MAPEV ++ AY+ D +S G +
Sbjct: 323 LLD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 381
Query: 217 EMVTFEYPY----SECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT-VSLRL- 270
+++ P+ ++ H ++ + PDS PE+R +E L V+ RL
Sbjct: 382 KLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF----SPELRSLLEGLLQRDVNRRLG 437
Query: 271 ----SARELLNDPFLQIDDCESNLRSLDY 295
A+E+ PF RSLD+
Sbjct: 438 CLGRGAQEVKESPF---------FRSLDW 457
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 76 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 131
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 132 HRDIKPENLLL-GSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDL 190
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 246
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 247 SQRPMLREVLEHPWI 261
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 83
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 84 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 139
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 140 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 196
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 197 ILHRIYTHQSDVWSYGVTVWELMTF 221
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRG 137
++L+H NI++F V ++ V E + G L + R + + + +Q++ G
Sbjct: 70 RSLRHPNIVRF--KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 138 LLYLHSHDPPVIHRDLKCDNIFVNGNQG-EVKIGDLGLA-AILRKSHAAHCVGTPEFMAP 195
+ Y H+ V HRDLK +N ++G+ +KI D G + + + S VGTP ++AP
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 196 EVY--EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV-----VSGKKPDSLY 248
EV +E ++ D++S G+ + M+ YP+ + P K + V PD Y
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD--Y 243
Query: 249 RVKDPEVRRFVEKC-LATVSLRLSARELLN 277
PE R + + +A + R+S E+ N
Sbjct: 244 VHISPECRHLISRIFVADPAKRISIPEIRN 273
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 102
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 103 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 158
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 159 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 215
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 216 ILHRIYTHQSDVWSYGVTVWELMTF 240
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 69 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 125 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 31/211 (14%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E++G G V++A +G +VK + E ER E+ L L H NI+
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKY-----NNEKAER---EVKALAKLDHVNIVH 68
Query: 88 FYTSW------VDTANRN--------INFVTEMFTSGTLRQY---RLKHKRVNIRAVKLW 130
+ W +T+++N + E GTL Q+ R K + A++L+
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK-SHAAHCVGT 189
QI +G+ Y+HS +I+RDLK NIF+ + +VKIGD GL L+ GT
Sbjct: 129 -EQITKGVDYIHS--KKLINRDLKPSNIFLVDTK-QVKIGDFGLVTSLKNDGKRXRSKGT 184
Query: 190 PEFMAPE-VYEEAYNELVDIYSFGMCILEMV 219
+M+PE + + Y + VD+Y+ G+ + E++
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 245
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 246 SQRPMLREVLEHPWI 260
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 28/210 (13%)
Query: 99 NINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNI 158
++F+ ++ G L + +H + ++ + +I+ GL H H+ V++RDLK NI
Sbjct: 266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANI 323
Query: 159 FVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEE--AYNELVDIYSFGMCIL 216
++ G V+I DLGLA K VGT +MAPEV ++ AY+ D +S G +
Sbjct: 324 LLD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 217 EMVTFEYPY----SECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT-VSLRL- 270
+++ P+ ++ H ++ + PDS PE+R +E L V+ RL
Sbjct: 383 KLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF----SPELRSLLEGLLQRDVNRRLG 438
Query: 271 ----SARELLNDPFLQIDDCESNLRSLDYS 296
A+E+ PF RSLD+
Sbjct: 439 CLGRGAQEVKESPF---------FRSLDWQ 459
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 28/210 (13%)
Query: 99 NINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNI 158
++F+ ++ G L + +H + ++ + +I+ GL H H+ V++RDLK NI
Sbjct: 266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANI 323
Query: 159 FVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEE--AYNELVDIYSFGMCIL 216
++ G V+I DLGLA K VGT +MAPEV ++ AY+ D +S G +
Sbjct: 324 LLD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 217 EMVTFEYPY----SECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT-VSLRL- 270
+++ P+ ++ H ++ + PDS PE+R +E L V+ RL
Sbjct: 383 KLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF----SPELRSLLEGLLQRDVNRRLG 438
Query: 271 ----SARELLNDPFLQIDDCESNLRSLDYS 296
A+E+ PF RSLD+
Sbjct: 439 CLGRGAQEVKESPF---------FRSLDWQ 459
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 20 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 79 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 134
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 135 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 193
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 194 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 249
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 250 SQRPMLREVLEHPWI 264
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 77
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 78 HVCRLLGICLTS---TVQLITQLMPFGXLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 133
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 134 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 79
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 80 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 135
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 136 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 84
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 85 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 140
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 141 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 80
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 81 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 136
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 137 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRG 137
++L+H NI++F V ++ V E + G L + R + + + +Q++ G
Sbjct: 69 RSLRHPNIVRF--KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 126
Query: 138 LLYLHSHDPPVIHRDLKCDNIFVNGNQG-EVKIGDLGLA-AILRKSHAAHCVGTPEFMAP 195
+ Y H+ V HRDLK +N ++G+ +KI D G + + + S VGTP ++AP
Sbjct: 127 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 184
Query: 196 EVY--EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV-----VSGKKPDSLY 248
EV +E ++ D++S G+ + M+ YP+ + P K + V PD Y
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD--Y 242
Query: 249 RVKDPEVRRFVEKC-LATVSLRLSARELLN 277
PE R + + +A + R+S E+ N
Sbjct: 243 VHISPECRHLISRIFVADPAKRISIPEIRN 272
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 76 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 131
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 132 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDL 190
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 246
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 247 SQRPMLREVLEHPWI 261
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 111/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTS--GTLRQYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ Q+L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLV 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G+ + EM+ + H Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRTYVE 261
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKL-YDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A D +G VA +++L + P R EI LLK L H NI+
Sbjct: 27 EKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIR---EISLLKELHHPNIV 82
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-VNIRAVKLWCRQILRGLLYLHSHD 145
V + R + V E F L++ ++K + +K++ Q+LRG+ + H H
Sbjct: 83 SLID--VIHSERCLTLVFE-FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVY--EE 200
++HRDLK N+ +N + G +K+ D GLA I +S+ H V T + AP+V +
Sbjct: 140 --ILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSY-THEVVTLWYRAPDVLMGSK 195
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYK 236
Y+ VDI+S G EM+T + + T Q+ K
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPK 231
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 69
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 70 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 125
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 126 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA+ V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 69 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 125 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKL-YDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A D +G VA +++L + P R EI LLK L H NI+
Sbjct: 27 EKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIR---EISLLKELHHPNIV 82
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-VNIRAVKLWCRQILRGLLYLHSHD 145
V + R + V E F L++ ++K + +K++ Q+LRG+ + H H
Sbjct: 83 SLID--VIHSERCLTLVFE-FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVY--EE 200
++HRDLK N+ +N + G +K+ D GLA I +S+ H V T + AP+V +
Sbjct: 140 --ILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSY-THEVVTLWYRAPDVLMGSK 195
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYK 236
Y+ VDI+S G EM+T + + T Q+ K
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPK 231
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 80
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 81 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 136
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 137 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 80
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 81 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 136
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 137 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 248
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 249 SQRPMLREVLEHPWI 263
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 77
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 78 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 133
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 134 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 15 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 73
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 74 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 129
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 130 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 188
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 189 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 244
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 245 SQRPMLREVLEHPWI 259
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 28/249 (11%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
++ILG+GA+ V+R + G A FL+ P D++ E +LK L HKNI+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDVQ--MREFEVLKKLNHKNIV 70
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVK-----LWCRQILRGLLYL 141
K + +T R+ + E G+L Y + + N + + R ++ G+ +L
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSL--YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 142 HSHDPPVIHRDLKCDNIF-VNGNQGE--VKIGDLGLAAILR-KSHAAHCVGTPEFMAPEV 197
+ ++HR++K NI V G G+ K+ D G A L GT E++ P++
Sbjct: 129 RENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDM 186
Query: 198 YEEA---------YNELVDIYSFGMCILEMVTFEYPYSECTHP---AQIYKKVVSGKKPD 245
YE A Y VD++S G+ T P+ P ++ K+++GK
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSG 246
Query: 246 SLYRVKDPE 254
++ V+ E
Sbjct: 247 AISGVQKAE 255
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 245
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 246 SQRPMLREVLEHPWI 260
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 87
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 88 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 143
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 144 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 200
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 201 ILHRIYTHQSDVWSYGVTVWELMTF 225
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E G + + K + + + + ++ L Y HS VI
Sbjct: 80 GYFHDATR--VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDL 194
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 250
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 251 SQRPMLREVLEHPWI 265
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 104/203 (51%), Gaps = 17/203 (8%)
Query: 28 EILGKGASKTVYRAF--DEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNI 85
++LG GA TVY+ E E +++ ++L + SP+ + + E +++ ++ + ++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELRE-ATSPKANKEILDEAYVMASVDNPHV 113
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHS 143
+ + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 114 CRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLE- 168
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE-VY 198
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E +
Sbjct: 169 -DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 199 EEAYNELVDIYSFGMCILEMVTF 221
Y D++S+G+ + E++TF
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTF 249
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E G + + K + + + + ++ L Y HS VI
Sbjct: 80 GYFHDATR--VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 250
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 251 SQRPMLREVLEHPWI 265
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 248
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 249 SQRPMLREVLEHPWI 263
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 71
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 72 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 127
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 128 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTF 209
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 106/233 (45%), Gaps = 18/233 (7%)
Query: 19 PTGRYGRY--NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHL 76
PT G + E LG G V R + G +VA Q + SP++ ER EI +
Sbjct: 9 PTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE---LSPKNRERWCLEIQI 65
Query: 77 LKTLKHKNIM---KFYTSWVDTANRNINFVT-EMFTSGTLRQYRLKHKR---VNIRAVKL 129
+K L H N++ + A ++ + E G LR+Y + + + ++
Sbjct: 66 MKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT 125
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVN-GNQGEV-KIGDLGLAAILRKSH-AAHC 186
I L YLH + +IHRDLK +NI + G Q + KI DLG A L +
Sbjct: 126 LLSDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 183
Query: 187 VGTPEFMAPEVYEE-AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV 238
VGT +++APE+ E+ Y VD +SFG E +T P+ P Q + KV
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 236
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 248
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 249 SQRPMLREVLEHPWI 263
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 106/233 (45%), Gaps = 18/233 (7%)
Query: 19 PTGRYGRY--NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHL 76
PT G + E LG G V R + G +VA Q + SP++ ER EI +
Sbjct: 10 PTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE---LSPKNRERWCLEIQI 66
Query: 77 LKTLKHKNIM---KFYTSWVDTANRNINFVT-EMFTSGTLRQYRLKHKR---VNIRAVKL 129
+K L H N++ + A ++ + E G LR+Y + + + ++
Sbjct: 67 MKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT 126
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVN-GNQGEV-KIGDLGLAAILRKSH-AAHC 186
I L YLH + +IHRDLK +NI + G Q + KI DLG A L +
Sbjct: 127 LLSDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 184
Query: 187 VGTPEFMAPEVYEE-AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV 238
VGT +++APE+ E+ Y VD +SFG E +T P+ P Q + KV
Sbjct: 185 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 237
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 12/175 (6%)
Query: 76 LLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQIL 135
LL+ +H NI+ + D + + VTE+ G L L+ K + R I
Sbjct: 69 LLRYGQHPNIITLKDVYDD--GKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTIT 126
Query: 136 RGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLAAILRKSHAAHCVG--TP 190
+ + YLH+ V+HRDLK NI +GN ++I D G A LR + T
Sbjct: 127 KTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA 184
Query: 191 EFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTH--PAQIYKKVVSGK 242
F+APEV E + Y+ DI+S G+ + M+T P++ P +I ++ SGK
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK 239
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A + Y G A +++L + P R EI +LK LKH NI+
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIV 63
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
K Y V + + V E + + + K + Q+L G+ Y HD
Sbjct: 64 KLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY--CHDR 119
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAI----LRKSHAAHCVGTPEFMAPEVY--EE 200
V+HRDLK N+ +N +GE+KI D GLA +RK H V T + AP+V +
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSK 176
Query: 201 AYNELVDIYSFGMCILEMV 219
Y+ +DI+S G EMV
Sbjct: 177 KYSTTIDIWSVGCIFAEMV 195
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A + Y G A +++L + P R EI +LK LKH NI+
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIV 63
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
K Y V + + V E + + + K + Q+L G+ Y HD
Sbjct: 64 KLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY--CHDR 119
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAI----LRKSHAAHCVGTPEFMAPEVY--EE 200
V+HRDLK N+ +N +GE+KI D GLA +RK H V T + AP+V +
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSK 176
Query: 201 AYNELVDIYSFGMCILEMV 219
Y+ +DI+S G EMV
Sbjct: 177 KYSTTIDIWSVGCIFAEMV 195
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRG 137
++L+H NI++F V ++ + E + G L + R + + + +Q+L G
Sbjct: 71 RSLRHPNIVRF--KEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSG 128
Query: 138 LLYLHSHDPPVIHRDLKCDNIFVNGNQG-EVKIGDLGLA-AILRKSHAAHCVGTPEFMAP 195
+ Y HS + HRDLK +N ++G+ +KI D G + + + S VGTP ++AP
Sbjct: 129 VSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 186
Query: 196 EVY--EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVV 239
EV +E ++ D++S G+ + M+ YP+ + P Y+K +
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTI 231
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY ++ +G GA V AFD GI VA KL Q+ +R Y E+ LLK + H
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + L H+R++ ++ C
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC----- 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP-----E 191
G+ +LHS +IHRDLK NI V + +KI D GLA ++ + + TP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTACTNFMMTPYVVTRY 190
Query: 192 FMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRV 250
+ APEV Y VDI+S G + E+V + H Q K + P + +
Sbjct: 191 YRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMA 250
Query: 251 K-DPEVRRFVE 260
P VR +VE
Sbjct: 251 ALQPTVRNYVE 261
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 13 LGKGKFGNVYLAREKQRKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 71
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 72 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 127
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI D G + S GT +++ PE+ E ++E VD+
Sbjct: 128 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 186
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 187 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 242
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 243 SQRPMLREVLEHPWI 257
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 69
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 70 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 125
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 126 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 69
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 70 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 125
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 126 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 69
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 70 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 125
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 126 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVK 68
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 69 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 125 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +K SP+ + + E +++ ++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVA---IKELREATSPKANKEILDEAYVMASVDNP 77
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 78 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 133
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 134 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 61 LQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK 120
++S + + ++ EI LK +H +I+K Y V + + V E + G L Y KH
Sbjct: 49 IRSLDVVGKIKREIQNLKLFRHPHIIKLYQ--VISTPTDFFMVMEYVSGGELFDYICKHG 106
Query: 121 RVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK 180
RV + +QIL + Y H H V+HRDLK +N+ ++ + KI D GL+ ++
Sbjct: 107 RVEEMEARRLFQQILSAVDYCHRH--MVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSD 163
Query: 181 SHAAH-CVGTPEFMAPEVYEEAY--NELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKK 237
G+P + APEV VDI+S G+ + ++ P+ + H ++KK
Sbjct: 164 GEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD-EHVPTLFKK 222
Query: 238 VVSG 241
+ G
Sbjct: 223 IRGG 226
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVK 68
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 69 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 125 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 29 ILGKGASKTVY----RAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
+LGKG+ V + DE +++ V + D +D+E E +L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD-----DDVECTMVEKRVLALPGKPP 402
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+ S T +R + FV E G L + + R + +I GL +L S
Sbjct: 403 FLTQLHSCFQTMDR-LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA--ILRKSHAAHCVGTPEFMAPEVYE-EA 201
+I+RDLK DN+ ++ ++G +KI D G+ I GTP+++APE+ +
Sbjct: 462 G--IIYRDLKLDNVMLD-SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 518
Query: 202 YNELVDIYSFGMCILEMVTFEYPY 225
Y + VD ++FG+ + EM+ + P+
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA----AHC--V 187
I++ L +LHS VIHRD+K N+ +N G+VK+ D G++ L A A C
Sbjct: 118 IVKALEHLHSK-LSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDDVAKDIDAGCKPY 175
Query: 188 GTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
PE + PE+ ++ Y+ DI+S G+ ++E+ +PY P Q K+VV P
Sbjct: 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP 235
Query: 248 YRVKDPEVRRFVEKCLATVSL-RLSARELLNDPFLQI 283
E F +CL S R + EL+ PF +
Sbjct: 236 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 18 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 76
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 77 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 132
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI + G + S GT +++ PE+ E ++E VD+
Sbjct: 133 HRDIKPENLLL-GSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 191
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 247
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 248 SQRPMLREVLEHPWI 262
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTS--GTLRQYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC----- 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EM+ + H Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRTYVE 261
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVK 69
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 70 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 125
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 126 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 61 LQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK 120
++S + + ++ EI LK +H +I+K Y V + + V E + G L Y KH
Sbjct: 49 IRSLDVVGKIKREIQNLKLFRHPHIIKLYQ--VISTPTDFFMVMEYVSGGELFDYICKHG 106
Query: 121 RVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK 180
RV + +QIL + Y H H V+HRDLK +N+ ++ + KI D GL+ ++
Sbjct: 107 RVEEMEARRLFQQILSAVDYCHRH--MVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSD 163
Query: 181 SHAAHC-VGTPEFMAPEVYEEAY--NELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKK 237
G+P + APEV VDI+S G+ + ++ P+ + H ++KK
Sbjct: 164 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD-EHVPTLFKK 222
Query: 238 VVSG 241
+ G
Sbjct: 223 IRGG 226
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G TV++A + VA +V+L D + P R EI LLK LKHKNI+
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR---EICLLKELKHKNIV 64
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
+ + V +++ + V E + + + ++ VK + Q+L+GL + HS +
Sbjct: 65 RLHD--VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLA---AILRKSHAAHCVGTPEFMAPEVYEEA-- 201
V+HRDLK N+ +N N GE+K+ + GLA I + ++A V T + P+V A
Sbjct: 122 -VLHRDLKPQNLLINRN-GELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKL 178
Query: 202 YNELVDIYSFGMCILEMVTFEYP 224
Y+ +D++S G E+ P
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRP 201
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIM 86
E +G+G VY+A + Y G A +++L + P R EI +LK LKH NI+
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIV 63
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
K Y V + + V E + + + K + Q+L G+ Y HD
Sbjct: 64 KLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY--CHDR 119
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAI----LRKSHAAHCVGTPEFMAPEVY--EE 200
V+HRDLK N+ +N +GE+KI D GLA +RK H + T + AP+V +
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDVLMGSK 176
Query: 201 AYNELVDIYSFGMCILEMV 219
Y+ +DI+S G EMV
Sbjct: 177 KYSTTIDIWSVGCIFAEMV 195
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 67
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 68 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 123
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 124 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 216
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 28/249 (11%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
++ILG+GA+ V+R + G A FL+ P D++ E +LK L HKNI+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDVQ--MREFEVLKKLNHKNIV 70
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVK-----LWCRQILRGLLYL 141
K + +T R+ + E G+L Y + + N + + R ++ G+ +L
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSL--YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 142 HSHDPPVIHRDLKCDNIF-VNGNQGE--VKIGDLGLAAILR-KSHAAHCVGTPEFMAPEV 197
+ ++HR++K NI V G G+ K+ D G A L GT E++ P++
Sbjct: 129 RENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186
Query: 198 YEEA---------YNELVDIYSFGMCILEMVTFEYPYSECTHP---AQIYKKVVSGKKPD 245
YE A Y VD++S G+ T P+ P ++ K+++GK
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSG 246
Query: 246 SLYRVKDPE 254
++ V+ E
Sbjct: 247 AISGVQKAE 255
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 18/258 (6%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL-KTLKHKNIMKF 88
LG G+ V++ + +G A + + P+D R E+ K +H ++
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL 122
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW--CRQILRGLLYLHSHDP 146
+W + I ++ +L+Q+ + ++ ++W R L L +LHS
Sbjct: 123 EQAWEEG---GILYLQTELCGPSLQQH-CEAWGASLPEAQVWGYLRDTLLALAHLHSQG- 177
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVYEEAYNEL 205
++H D+K NIF+ G +G K+GD GL L + A G P +MAPE+ + +Y
Sbjct: 178 -LVHLDVKPANIFL-GPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTA 235
Query: 206 VDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT 265
D++S G+ ILE+ E H + ++++ G P E+R + L
Sbjct: 236 ADVFSLGLTILEVAC----NMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEP 291
Query: 266 -VSLRLSARELLNDPFLQ 282
LR +A LL P L+
Sbjct: 292 DPKLRATAEALLALPVLR 309
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTS--GTLRQYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ Q+L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YLLYQMLV 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EM+ + H Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRTYVE 261
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 69 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 125 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 8/212 (3%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L EI + L+H NI++ Y
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMAL-KVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 81
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + I + E G L + KH R + + + ++ L Y H VI
Sbjct: 82 NYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK--VI 137
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G +GE+KI D G + GT +++ PE+ E + ++E VD+
Sbjct: 138 HRDIKPENLLM-GYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 196
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKVVS 240
+ G+ E + P+ +H + ++++V+
Sbjct: 197 WCAGVLCYEFLVGMPPFDSPSH-TETHRRIVN 227
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 8/212 (3%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L EI + L+H NI++ Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMAL-KVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + I + E G L + KH R + + + ++ L Y H VI
Sbjct: 81 NYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK--VI 136
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G +GE+KI D G + GT +++ PE+ E + ++E VD+
Sbjct: 137 HRDIKPENLLM-GYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 195
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKVVS 240
+ G+ E + P+ +H + ++++V+
Sbjct: 196 WCAGVLCYEFLVGMPPFDSPSH-TETHRRIVN 226
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 69 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 125 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 74
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI G+ YL
Sbjct: 75 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAEGMNYL 130
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 131 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 187
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 188 ILHRIYTHQSDVWSYGVTVWELMTF 212
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 69 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 125 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEY 217
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 81
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + + ++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 82 HVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 137
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 138 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTF 219
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 113/252 (44%), Gaps = 31/252 (12%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPE----- 191
G+ +LHS +IHRDLK NI V + +KI D GLA ++ + TPE
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPEVVTRY 190
Query: 192 FMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLY 248
+ APEV Y E VDI+S G + EM+ + H Q + KV+ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFM 249
Query: 249 RVKDPEVRRFVE 260
+ P VR +VE
Sbjct: 250 KKLQPTVRTYVE 261
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 69
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 70 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 125
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 126 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTS--GTLRQYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC----- 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EM+ + H Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRTYVE 261
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L E+ + L+H NI++ Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + + E GT+ + K + + + + ++ L Y HS VI
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G+ GE+KI + G + S GT +++ PE+ E ++E VD+
Sbjct: 134 HRDIKPENLLL-GSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKV--VSGKKPDSLYRVKDPEVRRFVEKCLATV 266
+S G+ E + + P+ T+ + YK++ V PD + + R ++
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTY-QETYKRISRVEFTFPDFVTEGARDLISRLLKH---NP 248
Query: 267 SLRLSARELLNDPFL 281
S R RE+L P++
Sbjct: 249 SQRPMLREVLEHPWI 263
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 78
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + + ++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 79 HVCRLLGICLTS---TVQLIMQLMPFGXLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 134
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 135 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTF 216
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 69 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 125 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 69 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 125 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 69 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 125 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKT--LKHKNI 85
E +GKG V+R ++G VA VK++ S D + + E L T L+H+NI
Sbjct: 43 ECVGKGRYGEVWRG--SWQGENVA---VKIF----SSRDEKSWFRETELYNTVMLRHENI 93
Query: 86 MKFYTSWVDTANRN----INFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
+ F S D +R+ + +T G+L Y + +++ I GL +L
Sbjct: 94 LGFIAS--DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI-VLSIASGLAHL 150
Query: 142 H------SHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH------CVGT 189
H P + HRDLK NI V N G+ I DLGLA + +S VGT
Sbjct: 151 HIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 209
Query: 190 PEFMAPEVYEEAYN-------ELVDIYSFGMCILEM 218
+MAPEV +E + VDI++FG+ + E+
Sbjct: 210 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 61/304 (20%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF 88
+LG+GA V A + G VA +++ +D P R EI +LK KH+NI+
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENIITI 74
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA-----VKLWCRQILRGLLYLHS 143
+ + N N E++ L Q L H+ ++ + ++ + Q LR + LH
Sbjct: 75 FNIQRPDSFENFN---EVYIIQELMQTDL-HRVISTQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA------------AHCVGTPE 191
+ VIHRDLK N+ +N N ++K+ D GLA I+ +S A V T
Sbjct: 131 SN--VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW 187
Query: 192 FMAPEVY--EEAYNELVDIYSFGMCILEMVTFE---YPYSECTHPAQIYKKVVSGKKPDS 246
+ APEV Y+ +D++S G CIL + +P + H + ++ D+
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 247 LYR-VKDPEVRRFV-----------EKCLATV----------------SLRLSARELLND 278
R ++ P R ++ EK V + R++A+E L
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306
Query: 279 PFLQ 282
P+LQ
Sbjct: 307 PYLQ 310
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 29 ILGKGASKTVY----RAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
+LGKG+ V + +E I++ V + D +D+E E +L L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQD-----DDVECTMVEKRVLALLDKPP 80
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+ S T +R + FV E G L + + + + +I GL +LH
Sbjct: 81 FLTQLHSCFQTVDR-LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKR 139
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV------GTPEFMAPEVY 198
+I+RDLK DN+ ++ ++G +KI D G+ K H V GTP+++APE+
Sbjct: 140 G--IIYRDLKLDNVMLD-SEGHIKIADFGMC----KEHMMDGVTTREFCGTPDYIAPEII 192
Query: 199 E-EAYNELVDIYSFGMCILEMVTFEYPY 225
+ Y + VD +++G+ + EM+ + P+
Sbjct: 193 AYQPYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 14/220 (6%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLER-LYCEIHLLKTLKHKN 84
+ E+LG GA V+ G A +K +SP + L EI +LK +KH+N
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIK-----KSPAFRDSSLENEIAVLKKIKHEN 67
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
I+ + T + + V ++ + G L L+ + L +Q+L + YLH +
Sbjct: 68 IVTLEDIYESTTHYYL--VMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 145 DPPVIHRDLKCDNIF--VNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVY-EEA 201
++HRDLK +N+ ++ I D GL+ + + + GTP ++APEV ++
Sbjct: 126 G--IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 202 YNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSG 241
Y++ VD +S G+ ++ P+ E T +++++K+ G
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFYEETE-SKLFEKIKEG 222
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 80
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + + ++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 81 HVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 136
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 137 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 79
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + + ++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 80 HVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 135
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 136 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 78
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + + ++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 79 HVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 134
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 135 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTF 216
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 69 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 125 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 8/212 (3%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LGKG VY A ++ +A +V L+ +L EI + L+H NI++ Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMAL-KVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ D + I + E G L + KH R + + + ++ L Y H VI
Sbjct: 81 NYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK--VI 136
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDI 208
HRD+K +N+ + G +GE+KI D G + GT +++ PE+ E + ++E VD+
Sbjct: 137 HRDIKPENLLM-GYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 195
Query: 209 YSFGMCILEMVTFEYPYSECTHPAQIYKKVVS 240
+ G+ E + P+ +H + ++++V+
Sbjct: 196 WCAGVLCYEFLVGMPPFDSPSH-TETHRRIVN 226
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 69 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 124
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 125 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + K L H+N++K
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 69
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 70 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 125
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 126 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIE-VAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIMK 87
+G+GA V++A D G VA +V++ + P R + L+T +H N+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 88 FYTSWVDTANRNINFVTEMF--TSGTLRQY--RLKHKRVNIRAVKLWCRQILRGLLYLHS 143
+ + +T +F L Y ++ V +K Q+LRGL +LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA-AHCVGTPEFMAPEV-YEEA 201
H V+HRDLK NI V + G++K+ D GLA I A V T + APEV + +
Sbjct: 139 HR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 202 YNELVDIYSFGMCILEM 218
Y VD++S G EM
Sbjct: 196 YATPVDLWSVGCIFAEM 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 14/237 (5%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S ED+ER E+ +LK ++H N++ + + + + + + E+ G L + + + +
Sbjct: 56 SREDIER---EVSILKEIQHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESL 110
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N + +KI D GLA I
Sbjct: 111 TEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYK- 236
+ + GTPEF+APE+ E D++S G+ +++ P+ T +
Sbjct: 169 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 228
Query: 237 KVVSGKKPDSLYRVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQIDDCESNLRS 292
V+ + D + + F+ + L R++ ++ L P+++ D + L S
Sbjct: 229 SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSS 285
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 61/304 (20%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF 88
+LG+GA V A + G VA +++ +D P R EI +LK KH+NI+
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENIITI 74
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA-----VKLWCRQILRGLLYLHS 143
+ + N N E++ L Q L H+ ++ + ++ + Q LR + LH
Sbjct: 75 FNIQRPDSFENFN---EVYIIQELMQTDL-HRVISTQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA------------AHCVGTPE 191
+ VIHRDLK N+ +N N ++K+ D GLA I+ +S A V T
Sbjct: 131 SN--VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRW 187
Query: 192 FMAPEVY--EEAYNELVDIYSFGMCILEMVTFE---YPYSECTHPAQIYKKVVSGKKPDS 246
+ APEV Y+ +D++S G CIL + +P + H + ++ D+
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 247 LYR-VKDPEVRRFV-----------EKCLATV----------------SLRLSARELLND 278
R ++ P R ++ EK V + R++A+E L
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306
Query: 279 PFLQ 282
P+LQ
Sbjct: 307 PYLQ 310
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 14/237 (5%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S ED+ER E+ +LK ++H N++ + + + + + + E+ G L + + + +
Sbjct: 56 SREDIER---EVSILKEIQHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESL 110
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N + +KI D GLA I
Sbjct: 111 TEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYK- 236
+ + GTPEF+APE+ E D++S G+ +++ P+ T +
Sbjct: 169 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 228
Query: 237 KVVSGKKPDSLYRVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQIDDCESNLRS 292
V+ + D + + F+ + L R++ ++ L P+++ D + L S
Sbjct: 229 SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSS 285
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 77
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + + ++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 78 HVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 133
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 134 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 95
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ VT + + + + +H ++ + + QI
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH--LSNDHICYFLYQI 153
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 154 LRGLKYIHSAN--VLHRDLKPSNLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 61/304 (20%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF 88
+LG+GA V A + G VA +++ +D P R EI +LK KH+NI+
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENIITI 74
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA-----VKLWCRQILRGLLYLHS 143
+ + N N E++ L Q L H+ ++ + ++ + Q LR + LH
Sbjct: 75 FNIQRPDSFENFN---EVYIIQELMQTDL-HRVISTQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA------------AHCVGTPE 191
+ VIHRDLK N+ +N N ++K+ D GLA I+ +S A V T
Sbjct: 131 SN--VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRW 187
Query: 192 FMAPEVY--EEAYNELVDIYSFGMCILEMVTFE---YPYSECTHPAQIYKKVVSGKKPDS 246
+ APEV Y+ +D++S G CIL + +P + H + ++ D+
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 247 LYR-VKDPEVRRFV-----------EKCLATV----------------SLRLSARELLND 278
R ++ P R ++ EK V + R++A+E L
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306
Query: 279 PFLQ 282
P+LQ
Sbjct: 307 PYLQ 310
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 14/237 (5%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S ED+ER E+ +LK ++H N++ + + + + + + E+ G L + + + +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVYENKTD--VILIGELVAGGELFDFLAEKESL 111
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N + +KI D GLA I
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYK- 236
+ + GTPEF+APE+ E D++S G+ +++ P+ T +
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
Query: 237 KVVSGKKPDSLYRVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQIDDCESNLRS 292
V+ + D + + F+ + L R++ ++ L P+++ D + L S
Sbjct: 230 SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSS 286
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 79
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 80 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 135
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D G A +L ++ HA ++MA E
Sbjct: 136 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 14/237 (5%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S ED+ER E+ +LK ++H N++ + + + + + + E+ G L + + + +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESL 111
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N + +KI D GLA I
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYK- 236
+ + GTPEF+APE+ E D++S G+ +++ P+ T +
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
Query: 237 KVVSGKKPDSLYRVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQIDDCESNLRS 292
V+ + D + + F+ + L R++ ++ L P+++ D + L S
Sbjct: 230 SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSS 286
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKT--LKHKNI 85
E +GKG V+R ++G VA VK++ S D + + E L T L+H+NI
Sbjct: 14 ECVGKGRYGEVWRG--SWQGENVA---VKIF----SSRDEKSWFRETELYNTVMLRHENI 64
Query: 86 MKFYTSWVDTANRN----INFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
+ F S D +R+ + +T G+L Y + +++ I GL +L
Sbjct: 65 LGFIAS--DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI-VLSIASGLAHL 121
Query: 142 H------SHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH------CVGT 189
H P + HRDLK NI V N G+ I DLGLA + +S VGT
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 190 PEFMAPEVYEEAYN-------ELVDIYSFGMCILEM 218
+MAPEV +E + VDI++FG+ + E+
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 84
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 85 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 140
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D G A +L ++ HA ++MA E
Sbjct: 141 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 14/237 (5%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S ED+ER E+ +LK ++H N++ + + + + + + E+ G L + + + +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESL 111
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N + +KI D GLA I
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYK- 236
+ + GTPEF+APE+ E D++S G+ +++ P+ T +
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
Query: 237 KVVSGKKPDSLYRVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQIDDCESNLRS 292
V+ + D + + F+ + L R++ ++ L P+++ D + L S
Sbjct: 230 SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSS 286
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKT--LKHKNI 85
E +GKG V+R ++G VA VK++ S D + + E L T L+H+NI
Sbjct: 14 ECVGKGRYGEVWRG--SWQGENVA---VKIF----SSRDEKSWFRETELYNTVMLRHENI 64
Query: 86 MKFYTSWVDTANRN----INFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
+ F S D +R+ + +T G+L Y + +++ I GL +L
Sbjct: 65 LGFIAS--DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI-VLSIASGLAHL 121
Query: 142 H------SHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH------CVGT 189
H P + HRDLK NI V N G+ I DLGLA + +S VGT
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 190 PEFMAPEVYEEAYN-------ELVDIYSFGMCILEM 218
+MAPEV +E + VDI++FG+ + E+
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 14/237 (5%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S ED+ER E+ +LK ++H N++ + + + + + + E+ G L + + + +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESL 111
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N + +KI D GLA I
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYK- 236
+ + GTPEF+APE+ E D++S G+ +++ P+ T +
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
Query: 237 KVVSGKKPDSLYRVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQIDDCESNLRS 292
V+ + D + + F+ + L R++ ++ L P+++ D + L S
Sbjct: 230 SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSS 286
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 77
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 135
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 136 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRG 137
++L+H NI++F V ++ V E + G L + R + + + +Q++ G
Sbjct: 70 RSLRHPNIVRF--KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 138 LLYLHSHDPPVIHRDLKCDNIFVNGNQG-EVKIGDLGLA-AILRKSHAAHCVGTPEFMAP 195
+ Y H+ V HRDLK +N ++G+ +KI G + + + S VGTP ++AP
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 196 EVY--EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV-----VSGKKPDSLY 248
EV +E ++ D++S G+ + M+ YP+ + P K + V PD Y
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD--Y 243
Query: 249 RVKDPEVRRFVEKC-LATVSLRLSARELLN 277
PE R + + +A + R+S E+ N
Sbjct: 244 VHISPECRHLISRIFVADPAKRISIPEIRN 273
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 125/259 (48%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 93
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 152 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ ++ D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 263
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 29 ILGKGASKTVY----RAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
+LGKG+ V + DE +++ V + D +D+E E +L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD-----DDVECTMVEKRVLALPGKPP 81
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+ S T +R + FV E G L + + R + +I GL +L S
Sbjct: 82 FLTQLHSCFQTMDR-LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA--ILRKSHAAHCVGTPEFMAPEVYE-EA 201
+I+RDLK DN+ ++ ++G +KI D G+ I GTP+++APE+ +
Sbjct: 141 G--IIYRDLKLDNVMLD-SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 197
Query: 202 YNELVDIYSFGMCILEMVTFEYPY 225
Y + VD ++FG+ + EM+ + P+
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++L GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 84
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 85 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 140
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 141 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 27 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 139
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-AAHCVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 140 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMVPFVVTRYYRAP 196
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EM+ + H Q + KV+ G +
Sbjct: 197 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKLQ 255
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 256 PTVRTYVE 263
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 78 KTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRG 137
++L+H NI++F V ++ V E + G L + R + + + +Q++ G
Sbjct: 70 RSLRHPNIVRF--KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 138 LLYLHSHDPPVIHRDLKCDNIFVNGNQG-EVKIGDLGLA-AILRKSHAAHCVGTPEFMAP 195
+ Y H+ V HRDLK +N ++G+ +KI G + + + S VGTP ++AP
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAP 185
Query: 196 EVY--EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV-----VSGKKPDSLY 248
EV +E ++ D++S G+ + M+ YP+ + P K + V PD ++
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 245
Query: 249 RVKDPEVRRFVEKC-LATVSLRLSARELLN 277
PE R + + +A + R+S E+ N
Sbjct: 246 --ISPECRHLISRIFVADPAKRISIPEIRN 273
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 14/235 (5%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S ED+ER E+ +LK ++H N++ + + + + + + E+ G L + + + +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESL 111
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N + +KI D GLA I
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYK- 236
+ + GTPEF+APE+ E D++S G+ +++ P+ T +
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
Query: 237 KVVSGKKPDSLYRVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQIDDCESNL 290
V+ + D + + F+ + L R++ ++ L P+++ D + L
Sbjct: 230 SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++L GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 77
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 78 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 133
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 134 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 175
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-AAHCVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 176 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 291
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 292 PTVRNYVE 299
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 22 RYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKL-YDFLQSPEDLERLYCEIHLLKTL 80
RY R + LG+G VY+A D VA +++L ++ P R E+ LLK L
Sbjct: 35 RYRRITK-LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR---EVSLLKEL 90
Query: 81 KHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLY 140
+H+NI++ + V N ++ + E + L++Y K+ V++R +K + Q++ G+ +
Sbjct: 91 QHRNIIELKS--VIHHNHRLHLIFE-YAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNF 147
Query: 141 LHSHDPPVIHRDLKCDNIFVNGNQGE----VKIGDLGLAAI--LRKSHAAHCVGTPEFMA 194
HS +HRDLK N+ ++ + +KIGD GLA + H + T +
Sbjct: 148 CHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRP 205
Query: 195 PEVY--EEAYNELVDIYSFGMCILEMV 219
PE+ Y+ VDI+S EM+
Sbjct: 206 PEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 77
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + +T++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 78 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 133
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D G A +L ++ HA ++MA E
Sbjct: 134 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTS--GTLRQYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC----- 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EM+ + H Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRTYVE 261
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 93
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 152 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I+ K++ + P+ + P+ R
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPF-RAGNEGLIFAKIIKLEYDFPEKFF----PKARD 263
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EM+ + H Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPSPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRTYVE 261
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIE-VAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIMK 87
+G+GA V++A D G VA +V++ + P R + L+T +H N+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 88 FYTSWVDTANRNINFVTEMF--TSGTLRQY--RLKHKRVNIRAVKLWCRQILRGLLYLHS 143
+ + +T +F L Y ++ V +K Q+LRGL +LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA-AHCVGTPEFMAPEV-YEEA 201
H V+HRDLK NI V + G++K+ D GLA I A V T + APEV + +
Sbjct: 139 HR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 202 YNELVDIYSFGMCILEM 218
Y VD++S G EM
Sbjct: 196 YATPVDLWSVGCIFAEM 212
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 30 LGKGASKTVYRAFDEYEGIE-VAWNQVKLYDFLQS-PEDLERLYCEIHLLKTLKHKNIMK 87
+G+GA V++A D G VA +V++ + P R + L+T +H N+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 88 FYTSWVDTANRNINFVTEMF--TSGTLRQY--RLKHKRVNIRAVKLWCRQILRGLLYLHS 143
+ + +T +F L Y ++ V +K Q+LRGL +LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA-AHCVGTPEFMAPEV-YEEA 201
H V+HRDLK NI V + G++K+ D GLA I A V T + APEV + +
Sbjct: 139 HR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 202 YNELVDIYSFGMCILEM 218
Y VD++S G EM
Sbjct: 196 YATPVDLWSVGCIFAEM 212
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG+GA+ VYR + +G + + L+ D + + EI +L L H NI+K
Sbjct: 61 LGRGATSIVYRC--KQKGTQKPYA----LKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLK 114
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ I+ V E+ T G L ++ + R +QIL + YLH + ++
Sbjct: 115 E--IFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG--IV 170
Query: 150 HRDLKCDNIF--VNGNQGEVKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVYEE-AYNEL 205
HRDLK +N+ +KI D GL+ I+ V GTP + APE+ AY
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPE 230
Query: 206 VDIYSFGMCI-LEMVTFEYPYSE 227
VD++S G+ + + FE Y E
Sbjct: 231 VDMWSVGIITYILLCGFEPFYDE 253
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC--V 187
I++ L +LHS VIHRD+K N+ +N G+VK D G++ L K A C
Sbjct: 145 IVKALEHLHSK-LSVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDIDAGCKPY 202
Query: 188 GTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
PE + PE+ ++ Y+ DI+S G+ +E+ +PY P Q K+VV P
Sbjct: 203 XAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP 262
Query: 248 YRVKDPEVRRFVEKCLATVSL-RLSARELLNDPFLQI 283
E F +CL S R + EL PF +
Sbjct: 263 ADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTL 299
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 138
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EM+ + H Q + KV+ G +
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKLQ 254
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 255 PTVRTYVE 262
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 44/224 (19%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E++G G V++A +G +VK + E ER E+ L L H NI+
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKY-----NNEKAER---EVKALAKLDHVNIVH 69
Query: 88 FYTSW---------------------------VDTANRNINFVTEMFTSGTLRQY---RL 117
+ W + + + E GTL Q+ R
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 118 KHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAI 177
K + A++L+ QI +G+ Y+HS +IHRDLK NIF+ + +VKIGD GL
Sbjct: 130 GEKLDKVLALELF-EQITKGVDYIHS--KKLIHRDLKPSNIFLVDTK-QVKIGDFGLVTS 185
Query: 178 LRK-SHAAHCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMV 219
L+ GT +M+PE + + Y + VD+Y+ G+ + E++
Sbjct: 186 LKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EM+ + H Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRTYVE 261
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ Q+L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS-----YLLYQMLX 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXT-LKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRNYVE 261
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 112/248 (45%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G + +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQ-WNKVIEQLGTPCPAFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRNYVE 261
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 76 LLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQIL 135
LL+ +H NI+ + D + + VTE+ G L L+ K + R I
Sbjct: 69 LLRYGQHPNIITLKDVYDD--GKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTIT 126
Query: 136 RGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLAAILRKSHAAHCVGTP-- 190
+ + YLH+ V+HRDLK NI +GN ++I D G A LR + + TP
Sbjct: 127 KTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG--LLXTPCY 182
Query: 191 --EFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTH--PAQIYKKVVSGK 242
F+APEV E + Y+ DI+S G+ + +T P++ P +I ++ SGK
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGK 239
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 77
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 135
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 136 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G+GA V A+D + VA ++ + + +R EI +L +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF---EHQTYXQRTLREIKILLRFRH 84
Query: 83 KNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLL 139
+NI+ + +++ V ++ + + + +H ++ + + QILRGL
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLK 142
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGTPEFMA 194
Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T + A
Sbjct: 143 YIHSAN--VLHRDLKPSNLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 195 PEVY--EEAYNELVDIYSFGMCILEMVT 220
PE+ + Y + +DI+S G + EM++
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 75
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 133
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 134 LRGLKYIHSAN--VLHRDLKPSNLLLNTTX-DLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 79
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 137
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 138 LRGLKYIHSAN--VLHRDLKPSNLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLC----- 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRNYVE 261
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 93
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 152 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I+ K++ + P+ + P+ R
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEGLIFAKIIKLEYDFPEKFF----PKARD 263
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 26 YNEILGKGASKTVY----RAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
Y ++LGKG V +A Y +++ +V + + +++ E +L+ +
Sbjct: 14 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-----AKDEVAHTVTESRVLQNTR 68
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H + ++ T +R + FV E G L + + + + + +I+ L YL
Sbjct: 69 HPFLTALKYAF-QTHDR-LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 126
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVGTPEFMAPEVYE 199
HS D V++RD+K +N+ ++ + G +KI D GL I + GTPE++APEV E
Sbjct: 127 HSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 183
Query: 200 EA-YNELVDIYSFGMCILEMVTFEYPYSECTH 230
+ Y VD + G+ + EM+ P+ H
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 215
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S ED+ER E+ +LK ++H N++ + + + + + + E+ G L + + + +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESL 111
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N + +KI D GLA I
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPY 225
+ + GTPEF+APE+ E D++S G+ +++ P+
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 107/215 (49%), Gaps = 16/215 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ LG+GA V A + VA V + + PE++++ EI + L H+N++K
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINAMLNHENVVK 69
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYLHSHDP 146
FY NI ++ + SG R++ + + + Q++ G++YLH
Sbjct: 70 FYGH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG- 125
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPEVYE--E 200
+ HRD+K +N+ ++ + +KI D GLA + R ++ + GT ++APE+ + E
Sbjct: 126 -ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
+ E VD++S G+ + M+ E P+ + + Q Y
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 26 YNEILGKGASKTVY----RAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
Y ++LGKG V +A Y +++ +V + + +++ E +L+ +
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEV-----IIAKDEVAHTVTESRVLQNTR 63
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H + ++ T +R + FV E G L + + + + + +I+ L YL
Sbjct: 64 HPFLTALKYAF-QTHDR-LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVGTPEFMAPEVYE 199
HS D V++RD+K +N+ ++ + G +KI D GL I + GTPE++APEV E
Sbjct: 122 HSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 200 EA-YNELVDIYSFGMCILEMVTFEYPYSECTH 230
+ Y VD + G+ + EM+ P+ H
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 75
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 133
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 134 LRGLKYIHSAN--VLHRDLKPSNLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 75
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 133
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 134 LRGLKYIHSAN--VLHRDLKPSNLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S ED+ER E+ +LK ++H N++ + + + + + + E+ G L + + + +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESL 111
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N + +KI D GLA I
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPY 225
+ + GTPEF+APE+ E D++S G+ +++ P+
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILR--KSH 182
RA+ + QI+ GL +LH + +I+RDLK +N+ ++ + G V+I DLGLA L+ ++
Sbjct: 290 RAI-FYTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTK 345
Query: 183 AAHCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
GTP FMAPE + E Y+ VD ++ G+ + EM+ P+
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 14/235 (5%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S ED+ER E+ +LK ++H N++ + + + + + + E+ G L + + + +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESL 111
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N + +KI D GLA I
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYK- 236
+ + GTPEF+APE+ E D++S G+ +++ P+ T +
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
Query: 237 KVVSGKKPDSLYRVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQIDDCESNL 290
V+ + D + + F+ + L R++ ++ L P+++ D + L
Sbjct: 230 SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ Q+L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS-----YLLYQMLX 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-AAHCVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXT-LKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRNYVE 261
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 14/169 (8%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S ED+ER E+ +LK ++H N++ + + + + + + E+ G L + + + +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESL 111
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N + +KI D GLA I
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 179 RKSHAAHCVGTPEFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPY 225
+ + GTPEF+APE+ YE E D++S G+ +++ P+
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S ED+ER E+ +LK ++H N++ + + + + + + E+ G L + + + +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESL 111
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N + +KI D GLA I
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPY 225
+ + GTPEF+APE+ E D++S G+ +++ P+
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 175
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-AAHCVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 176 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 291
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 292 PTVRNYVE 299
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 26 YNEILGKGASKTVY----RAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
Y ++LGKG V +A Y +++ +V + + +++ E +L+ +
Sbjct: 12 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEV-----IIAKDEVAHTVTESRVLQNTR 66
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H + ++ T +R + FV E G L + + + + + +I+ L YL
Sbjct: 67 HPFLTALKYAF-QTHDR-LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 124
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVGTPEFMAPEVYE 199
HS D V++RD+K +N+ ++ + G +KI D GL I + GTPE++APEV E
Sbjct: 125 HSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 181
Query: 200 EA-YNELVDIYSFGMCILEMVTFEYPYSECTH 230
+ Y VD + G+ + EM+ P+ H
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 213
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 93
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 152 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 263
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 26 YNEILGKGASKTVY----RAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
Y ++LGKG V +A Y +++ +V + + +++ E +L+ +
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEV-----IIAKDEVAHTVTESRVLQNTR 63
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H + ++ T +R + FV E G L + + + + + +I+ L YL
Sbjct: 64 HPFLTALKYAF-QTHDR-LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVGTPEFMAPEVYE 199
HS D V++RD+K +N+ ++ + G +KI D GL I + GTPE++APEV E
Sbjct: 122 HSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 200 EA-YNELVDIYSFGMCILEMVTFEYPYSECTH 230
+ Y VD + G+ + EM+ P+ H
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S ED+ER E+ +LK ++H N++ + + + + + + E+ G L + + + +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESL 111
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N + +KI D GLA I
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPY 225
+ + GTPEF+APE+ E D++S G+ +++ P+
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 83
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 84 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 141
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 142 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 75
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 133
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 134 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 94
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 95 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 153 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 264
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 265 LVEKLLVLDATKRLGCEEM 283
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 79
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 137
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 138 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLXEXVAT 194
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILR--KSH 182
RA+ + QI+ GL +LH + +I+RDLK +N+ ++ + G V+I DLGLA L+ ++
Sbjct: 290 RAI-FYTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTK 345
Query: 183 AAHCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
GTP FMAPE + E Y+ VD ++ G+ + EM+ P+
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ Q+L
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS-----YLLYQMLX 130
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-AAHCVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 131 GIKHLHSAG--IIHRDLKPSNIVVKSDXT-LKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 246
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 247 PTVRNYVE 254
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 80
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 138
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 139 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLXEXVAT 195
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILR--KSH 182
RA+ + QI+ GL +LH + +I+RDLK +N+ ++ + G V+I DLGLA L+ ++
Sbjct: 290 RAI-FYTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTK 345
Query: 183 AAHCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
GTP FMAPE + E Y+ VD ++ G+ + EM+ P+
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 94
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 95 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 153 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 264
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 265 LVEKLLVLDATKRLGCEEM 283
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 79
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH--LSNDHICYFLYQI 137
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 138 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 80
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 138
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 139 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 81
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 82 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 139
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 140 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 72
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 73 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 130
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 131 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 79
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 137
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 138 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 75
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 133
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 134 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 93
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 152 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 263
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 26 YNEILGKGASKTVY----RAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
Y ++LGKG V +A Y +++ +V + + +++ E +L+ +
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEV-----IIAKDEVAHTVTESRVLQNTR 63
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H + ++ T +R + FV E G L + + + + + +I+ L YL
Sbjct: 64 HPFLTALKYAF-QTHDR-LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVGTPEFMAPEVYE 199
HS D V++RD+K +N+ ++ + G +KI D GL I + GTPE++APEV E
Sbjct: 122 HSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 200 EA-YNELVDIYSFGMCILEMVTFEYPYSECTH 230
+ Y VD + G+ + EM+ P+ H
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 77
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 78 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 135
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 136 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 73
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 131
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 132 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 26 YNEILGKGASKTVY----RAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
Y ++LGKG V +A Y +++ +V + + +++ E +L+ +
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-----AKDEVAHTVTESRVLQNTR 63
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H + ++ T +R + FV E G L + + + + + +I+ L YL
Sbjct: 64 HPFLTALKYAF-QTHDR-LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVGTPEFMAPEVYE 199
HS D V++RD+K +N+ ++ + G +KI D GL I + GTPE++APEV E
Sbjct: 122 HSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 200 EA-YNELVDIYSFGMCILEMVTFEYPYSECTH 230
+ Y VD + G+ + EM+ P+ H
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 73
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 131
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 132 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 26 YNEILGKGASKTVY----RAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
Y ++LGKG V +A Y +++ +V + + +++ E +L+ +
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEV-----IIAKDEVAHTVTESRVLQNTR 63
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H + ++ T +R + FV E G L + + + + + +I+ L YL
Sbjct: 64 HPFLTALKYAF-QTHDR-LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVGTPEFMAPEVYE 199
HS D V++RD+K +N+ ++ + G +KI D GL I + GTPE++APEV E
Sbjct: 122 HSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 200 EA-YNELVDIYSFGMCILEMVTFEYPYSECTH 230
+ Y VD + G+ + EM+ P+ H
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--------HQTYCQRTLREIKIL 95
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 153
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 154 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 24 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 136
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 137 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 193
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 194 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 252
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 253 PTVRNYVE 260
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRNYVE 261
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 138
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 254
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 255 PTVRNYVE 262
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRNYVE 261
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 96
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 97 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 155 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P + + P+ R
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPAAFF----PKARD 266
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 267 LVEKLLVLDATKRLGCEEM 285
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 8/208 (3%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNI 85
Y ++LGKG V ++ G A +K + + + +++ E +L+ +H +
Sbjct: 14 YLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHD 145
S+ T +R + FV E G L + + + + + + +I+ L YLHS +
Sbjct: 73 TALKYSF-QTHDR-LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS-E 129
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVGTPEFMAPEVYEEA-Y 202
V++RDLK +N+ ++ + G +KI D GL I + GTPE++APEV E+ Y
Sbjct: 130 KNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 188
Query: 203 NELVDIYSFGMCILEMVTFEYPYSECTH 230
VD + G+ + EM+ P+ H
Sbjct: 189 GRAVDWWGLGVVMYEMMCGRLPFYNQDH 216
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRNYVE 261
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILR--KSH 182
RA+ + QI+ GL +LH + +I+RDLK +N+ ++ + G V+I DLGLA L+ ++
Sbjct: 290 RAI-FYTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTK 345
Query: 183 AAHCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
GTP FMAPE + E Y+ VD ++ G+ + EM+ P+
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC-----EIHLL 77
RY + +G+GA V A+D + VA ++ ++ + YC EI +L
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFE--------HQTYCQRTLREIKIL 79
Query: 78 KTLKHKNIM---KFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQI 134
+H+NI+ + +++ V ++ + + + +H ++ + + QI
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQI 137
Query: 135 LRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-----AAHCVGT 189
LRGL Y+HS + V+HRDLK N+ +N ++KI D GLA + H V T
Sbjct: 138 LRGLKYIHSAN--VLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 190 PEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ APE+ + Y + +DI+S G + EM++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 138
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-AAHCVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 254
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 255 PTVRNYVE 262
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 18/263 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPE--DLERLYCEIHLLKTLKHKN 84
+E LG GA V+R + G A F+ +P D E + EI + L+H
Sbjct: 162 HEELGTGAFGVVHRVTERATGNNFA------AKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTL-RQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
++ + ++ D + + + E + G L + +H +++ + RQ+ +GL ++H
Sbjct: 216 LVNLHDAFED--DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 273
Query: 144 HDPPVIHRDLKCDNI-FVNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAPEVYE-E 200
++ +H DLK +NI F E+K+ D GL A L + GT EF APEV E +
Sbjct: 274 NN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 331
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYK-KVVSGKKPDSLYRVKDPEVRRFV 259
D++S G+ +++ P+ + K DS + + + F+
Sbjct: 332 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI 391
Query: 260 EK-CLATVSLRLSARELLNDPFL 281
K LA + R++ + L P+L
Sbjct: 392 RKLLLADPNTRMTIHQALEHPWL 414
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 91
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 92 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 150 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 261
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 79
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + + ++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 80 HVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 135
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D G A +L ++ HA ++MA E
Sbjct: 136 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 8/208 (3%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNI 85
Y ++LGKG V ++ G A +K + + + +++ E +L+ +H +
Sbjct: 12 YLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHD 145
S+ T +R + FV E G L + + + + + + +I+ L YLHS +
Sbjct: 71 TALKYSF-QTHDR-LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS-E 127
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVGTPEFMAPEVYEEA-Y 202
V++RDLK +N+ ++ + G +KI D GL I + GTPE++APEV E+ Y
Sbjct: 128 KNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 186
Query: 203 NELVDIYSFGMCILEMVTFEYPYSECTH 230
VD + G+ + EM+ P+ H
Sbjct: 187 GRAVDWWGLGVVMYEMMCGRLPFYNQDH 214
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 93
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 152 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 263
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 91
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 92 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 150 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 261
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 91
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 92 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 150 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 261
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 18/263 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPE--DLERLYCEIHLLKTLKHKN 84
+E LG GA V+R + G A F+ +P D E + EI + L+H
Sbjct: 56 HEELGTGAFGVVHRVTERATGNNFA------AKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTL-RQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
++ + ++ D + + + E + G L + +H +++ + RQ+ +GL ++H
Sbjct: 110 LVNLHDAFED--DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 167
Query: 144 HDPPVIHRDLKCDNI-FVNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAPEVYE-E 200
++ +H DLK +NI F E+K+ D GL A L + GT EF APEV E +
Sbjct: 168 NN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 225
Query: 201 AYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYK-KVVSGKKPDSLYRVKDPEVRRFV 259
D++S G+ +++ P+ + K DS + + + F+
Sbjct: 226 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI 285
Query: 260 EK-CLATVSLRLSARELLNDPFL 281
K LA + R++ + L P+L
Sbjct: 286 RKLLLADPNTRMTIHQALEHPWL 308
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 131
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-AAHCVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 247
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 248 PTVRNYVE 255
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 129/295 (43%), Gaps = 43/295 (14%)
Query: 23 YGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK- 81
Y +E+LG+GA V A G E A VK+ + Q+ R++ E+ L +
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYA---VKIIE-KQAGHSRSRVFREVETLYQCQG 69
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
+KNI++ + D + V E G++ + K K N R R + L +L
Sbjct: 70 NKNILELIEFFED--DTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFL 127
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQ--GEVKIGDLGLAAILRKSHAAHCVGTP--------- 190
H+ + HRDLK +NI + VKI D L + ++ +++ + TP
Sbjct: 128 HTKG--IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA 185
Query: 191 EFMAPEVYE------EAYNELVDIYSFGMCILEMVTFEYPY-----SEC---------TH 230
E+MAPEV E Y++ D++S G+ + M++ P+ ++C
Sbjct: 186 EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVC 245
Query: 231 PAQIYKKVVSGKK--PDSLYRVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
++++ + GK PD + E + + K L RLSA ++L P++Q
Sbjct: 246 QNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++L GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 84
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + + ++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 85 HVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 140
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D GLA +L ++ HA ++MA E
Sbjct: 141 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 130
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-AAHCVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 131 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 246
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 247 PTVRNYVE 254
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 79
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + + ++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 80 HVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 135
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D G A +L ++ HA ++MA E
Sbjct: 136 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 131
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH-AAHCVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VDI+S G + EMV + + + Q + KV+ G +
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 247
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 248 PTVRNYVE 255
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 8/208 (3%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNI 85
Y ++LGKG V ++ G A +K + + + +++ E +L+ +H +
Sbjct: 13 YLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHD 145
S+ T +R + FV E G L + + + + + + +I+ L YLHS +
Sbjct: 72 TALKYSF-QTHDR-LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS-E 128
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVGTPEFMAPEVYEEA-Y 202
V++RDLK +N+ ++ + G +KI D GL I + GTPE++APEV E+ Y
Sbjct: 129 KNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 203 NELVDIYSFGMCILEMVTFEYPYSECTH 230
VD + G+ + EM+ P+ H
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYNQDH 215
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 28 EILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHK 83
++LG GA TVY+ EG I VA +++ SP+ + + E +++ ++ +
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR---EATSPKANKEILDEAYVMASVDNP 81
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYL 141
++ + + + + + ++ G L Y +HK NI + L WC QI +G+ YL
Sbjct: 82 HVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYL 137
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPE- 196
D ++HRDL N+ V Q VKI D G A +L ++ HA ++MA E
Sbjct: 138 E--DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF 221
+ Y D++S+G+ + E++TF
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTF 219
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 13 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 71
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 72 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 130 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G CI+ + P + I++K++ + P+ + P+ R
Sbjct: 187 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 241
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 242 LVEKLLVLDATKRLGCEEM 260
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 45/230 (19%)
Query: 13 EFVEVDPTGRYGRYNEILGKGASKTVYRA--FDEYEGIEVAWNQVKLYDFLQSPEDLERL 70
+ +EV GR+G V++A +EY VK++ +Q + +
Sbjct: 27 QLLEVKARGRFG------------CVWKAQLLNEYVA-------VKIFP-IQDKQSWQNE 66
Query: 71 YCEIHLLKTLKHKNIMKFYTSWVDTANRNINF--VTEMFTSGTLRQYRLKHKRVNIRAVK 128
Y E++ L +KH+NI++F + + +++ +T G+L + LK V+ +
Sbjct: 67 Y-EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDF-LKANVVSWNELC 124
Query: 129 LWCRQILRGLLYLH--------SHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK 180
+ RGL YLH H P + HRD+K N+ + N I D GLA
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC-IADFGLALKFEA 183
Query: 181 SHAA----HCVGTPEFMAPEVYEEAYN------ELVDIYSFGMCILEMVT 220
+A VGT +MAPEV E A N +D+Y+ G+ + E+ +
Sbjct: 184 GKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 98
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y + D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 99 FVKLYFCFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 157 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 214 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 268
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 269 LVEKLLVLDATKRLGCEEM 287
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 70
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 71 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 129 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 240
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 241 LVEKLLVLDATKRLGCEEM 259
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 69
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 70 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 128 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 239
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 240 LVEKLLVLDATKRLGCEEM 258
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 68
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 69 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 127 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 238
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 239 LVEKLLVLDATKRLGCEEM 257
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 8/208 (3%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNI 85
Y ++LGKG V ++ G A +K + + + +++ E +L+ +H +
Sbjct: 155 YLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHD 145
S+ T +R + FV E G L + + + + + + +I+ L YLHS +
Sbjct: 214 TALKYSF-QTHDR-LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS-E 270
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVGTPEFMAPEVYEEA-Y 202
V++RDLK +N+ ++ + G +KI D GL I + GTPE++APEV E+ Y
Sbjct: 271 KNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 329
Query: 203 NELVDIYSFGMCILEMVTFEYPYSECTH 230
VD + G+ + EM+ P+ H
Sbjct: 330 GRAVDWWGLGVVMYEMMCGRLPFYNQDH 357
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 8/208 (3%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNI 85
Y ++LGKG V ++ G A +K + + + +++ E +L+ +H +
Sbjct: 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHD 145
S+ T +R + FV E G L + + + + + + +I+ L YLHS +
Sbjct: 211 TALKYSF-QTHDR-LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS-E 267
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAAHCVGTPEFMAPEVYEEA-Y 202
V++RDLK +N+ ++ + G +KI D GL I + GTPE++APEV E+ Y
Sbjct: 268 KNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 326
Query: 203 NELVDIYSFGMCILEMVTFEYPYSECTH 230
VD + G+ + EM+ P+ H
Sbjct: 327 GRAVDWWGLGVVMYEMMCGRLPFYNQDH 354
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 111/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 137
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VD++S G + EMV + + + Q + KV+ G +
Sbjct: 195 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 253
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 254 PTVRTYVE 261
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 75
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 76 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 134 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 245
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 246 LVEKLLVLDATKRLGCEEM 264
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 15/243 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKNI 85
+ ++GKG+ V +A+D +E W +K+ L + E+ LL+ + KH
Sbjct: 40 DSLIGKGSFGQVVKAYDR---VEQEWVAIKIIK--NKKAFLNQAQIEVRLLELMNKHDTE 94
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL-----WCRQILRGLLY 140
MK+Y + N + +F + Y L + N R V L + +Q+ LL+
Sbjct: 95 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLL-RNTNFRGVSLNLTRKFAQQMCTALLF 153
Query: 141 LHSHDPPVIHRDLKCDNIFV-NGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEV-Y 198
L + + +IH DLK +NI + N + +KI D G + L + + + + +PEV
Sbjct: 154 LATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-RIYQXIQSRFYRSPEVLL 212
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRF 258
Y+ +D++S G ++EM T E +S Q+ K V P + + P+ R+F
Sbjct: 213 GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKF 272
Query: 259 VEK 261
EK
Sbjct: 273 FEK 275
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 111/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 30 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 142
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 143 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 199
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VD++S G + EMV + + + Q + KV+ G +
Sbjct: 200 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 258
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 259 PTVRTYVE 266
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ T A + E A ++ ++ + + E ++ L H
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 91
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 92 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 150 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G I ++V P+ + I++K++ + P+ + P+ R
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDFPEKFF----PKARD 261
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 90
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 91 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 149 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G CI+ + P + I++K++ + P+ + P+ R
Sbjct: 206 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 260
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 261 LVEKLLVLDATKRLGCEEM 279
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 12/168 (7%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S ED+ER E+ +LK ++H N++ + + + + + + E+ G L + + + +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESL 111
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N + +KI D GLA I
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPY 225
+ + GTP F+APE+ E D++S G+ +++ P+
Sbjct: 170 FGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 19/228 (8%)
Query: 3 GLTHLEPDCSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ 62
G + P+C E + V G YG+ ++ + T G A +K ++
Sbjct: 10 GPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANT---------GKIFAMKVLKKAMIVR 60
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
+ +D E ++L+ +KH I+ ++ + + E + G L ++ +R
Sbjct: 61 NAKDTAHTKAERNILEEVKHPFIVDLIYAF--QTGGKLYLILEYLSGGELF---MQLERE 115
Query: 123 NIRAVKLWCRQILRGLLYL-HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILR 179
I C + + L H H +I+RDLK +NI +N +QG VK+ D GL +I
Sbjct: 116 GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHD 174
Query: 180 KSHAAHCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYS 226
+ GT E+MAPE+ +N VD +S G + +M+T P++
Sbjct: 175 GTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++ +ILG+G+ TV A + E A ++ ++ + + E ++ L H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPF 90
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K Y ++ D + + F +G L +Y K + + + +I+ L YLH
Sbjct: 91 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAPEVY-E 199
+IHRDLK +NI +N + ++I D G A +L +++ A VGT ++++PE+ E
Sbjct: 149 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK--PDSLYRVKDPEVRR 257
++ + D+++ G CI+ + P + I++K++ + P+ + P+ R
Sbjct: 206 KSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 260
Query: 258 FVEKCLAT-VSLRLSAREL 275
VEK L + RL E+
Sbjct: 261 LVEKLLVLDATKRLGCEEM 279
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 19/228 (8%)
Query: 3 GLTHLEPDCSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ 62
G + P+C E + V G YG+ ++ + T G A +K ++
Sbjct: 10 GPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANT---------GKIFAMKVLKKAMIVR 60
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
+ +D E ++L+ +KH I+ ++ + + E + G L ++ +R
Sbjct: 61 NAKDTAHTKAERNILEEVKHPFIVDLIYAF--QTGGKLYLILEYLSGGELF---MQLERE 115
Query: 123 NIRAVKLWCRQILRGLLYL-HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRK 180
I C + + L H H +I+RDLK +NI +N +QG VK+ D GL +
Sbjct: 116 GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHD 174
Query: 181 SHAAHCV-GTPEFMAPEV-YEEAYNELVDIYSFGMCILEMVTFEYPYS 226
H GT E+MAPE+ +N VD +S G + +M+T P++
Sbjct: 175 GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 111/248 (44%), Gaps = 23/248 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
RY + +G GA V A+D VA KL Q+ +R Y E+ L+K + H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 83 KNIMKFYTSWVDTAN----RNINFVTEMFTSGTLR--QYRLKHKRVNIRAVKLWCRQILR 136
KNI+ + + +++ V E+ + + Q L H+R++ ++ C
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC----- 131
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH-CVGTPEFMAP 195
G+ +LHS +IHRDLK NI V + +KI D GLA S V T + AP
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
Query: 196 EV-YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS--GKKPDSLYRVKD 252
EV Y E VD++S G + EMV + + + Q + KV+ G +
Sbjct: 189 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ 247
Query: 253 PEVRRFVE 260
P VR +VE
Sbjct: 248 PTVRTYVE 255
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Query: 24 GRY--NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
G+Y ++LG+G+ V D A +K + P + EI LL+ L+
Sbjct: 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR 64
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWCRQILRGLLY 140
HKN+++ + + + V E G + KR + + Q++ GL Y
Sbjct: 65 HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEY 124
Query: 141 LHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV----GTPEFMAPE 196
LHS ++H+D+K N+ + G +KI LG+A L A G+P F PE
Sbjct: 125 LHSQG--IVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 197 VYE--EAYNEL-VDIYSFGMCILEMVTFEYPY 225
+ + ++ VDI+S G+ + + T YP+
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 15/243 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKNI 85
+ ++GKG+ V +A+D +E W +K+ L + E+ LL+ + KH
Sbjct: 59 DSLIGKGSFGQVVKAYDR---VEQEWVAIKIIK--NKKAFLNQAQIEVRLLELMNKHDTE 113
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL-----WCRQILRGLLY 140
MK+Y + N + +F + Y L + N R V L + +Q+ LL+
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLL-RNTNFRGVSLNLTRKFAQQMCTALLF 172
Query: 141 LHSHDPPVIHRDLKCDNIFV-NGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEV-Y 198
L + + +IH DLK +NI + N + +KI D G + L + + + + +PEV
Sbjct: 173 LATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-RIYQXIQSRFYRSPEVLL 231
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRF 258
Y+ +D++S G ++EM T E +S Q+ K V P + + P+ R+F
Sbjct: 232 GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKF 291
Query: 259 VEK 261
EK
Sbjct: 292 FEK 294
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 45/291 (15%)
Query: 21 GRYGRY--NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ----SPEDLERL---- 70
G Y Y EILG+G S V R + E A VK+ D S E+++ L
Sbjct: 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYA---VKIIDVTGGGSFSAEEVQELREAT 70
Query: 71 YCEIHLLKTLK-HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL 129
E+ +L+ + H NI++ ++ N V ++ G L Y + ++ + +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-G 188
R +L + LH + ++HRDLK +NI ++ + +K+ D G + L V G
Sbjct: 129 IMRALLEVICALHKLN--IVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLRSVCG 185
Query: 189 TPEFMAPEVYE-------EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQ--IYKKVV 239
TP ++APE+ E Y + VD++S G+ + ++ P+ H Q + + ++
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF---WHRKQMLMLRMIM 242
Query: 240 SGKKPDSLYRVKDPE-------VRRFVEKCLATV-SLRLSARELLNDPFLQ 282
SG Y+ PE V+ V + L R +A E L PF Q
Sbjct: 243 SGN-----YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPED--LERLYC-EIHLLKTLKHKNI 85
++G+G+ V + ++ G VA + FL+S +D ++++ EI LLK L+H+N+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKK-----FLESDDDKMVKKIAMREIKLLKQLRHENL 86
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHD 145
+ V + V E L L ++ + V+ + QI+ G+ + HSH+
Sbjct: 87 VNLLE--VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN 144
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC--VGTPEFMAPE--VYEEA 201
+IHRD+K +NI V+ G VK+ D G A L + V T + APE V +
Sbjct: 145 --IIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 202 YNELVDIYSFGMCILEMVTFEYPYSECTHPAQIY 235
Y + VD+++ G + EM E + + Q+Y
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 15/243 (6%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKNI 85
+ ++GKG+ V +A+D +E W +K+ L + E+ LL+ + KH
Sbjct: 59 DSLIGKGSFGQVVKAYDR---VEQEWVAIKIIK--NKKAFLNQAQIEVRLLELMNKHDTE 113
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL-----WCRQILRGLLY 140
MK+Y + N + +F + Y L + N R V L + +Q+ LL+
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLL-RNTNFRGVSLNLTRKFAQQMCTALLF 172
Query: 141 LHSHDPPVIHRDLKCDNIFV-NGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEV-Y 198
L + + +IH DLK +NI + N + +KI D G + L + + + + +PEV
Sbjct: 173 LATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQ-RIYQXIQSRFYRSPEVLL 231
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRF 258
Y+ +D++S G ++EM T E +S Q+ K V P + + P+ R+F
Sbjct: 232 GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKF 291
Query: 259 VEK 261
EK
Sbjct: 292 FEK 294
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 96/223 (43%), Gaps = 50/223 (22%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLY---CEIHLLKTLKHK 83
E +GKG V+R ++ G EVA VK++ + ER + EI+ L+H+
Sbjct: 47 QESIGKGRFGEVWRG--KWRGEEVA---VKIFSSRE-----ERSWFREAEIYQTVMLRHE 96
Query: 84 NIMKFYTS-------WVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILR 136
NI+ F + W + V++ G+L Y L V + +
Sbjct: 97 NILGFIAADNKDNGTWT-----QLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLALSTAS 150
Query: 137 GLLYLHSH------DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA------ 184
GL +LH P + HRDLK NI V N G I DLGLA +R A
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDIA 207
Query: 185 --HCVGTPEFMAPEVYEEAYN-------ELVDIYSFGMCILEM 218
H VGT +MAPEV +++ N + DIY+ G+ E+
Sbjct: 208 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 49/231 (21%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG+G V+ A ++ + A +++L + + E + R E+ L L+H I++++
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMR---EVKALAKLEHPGIVRYF 69
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYR-LKHKRVNIRAVKLWCR---------------- 132
+W++ TE + + Y ++ + +K W
Sbjct: 70 NAWLEKNT------TEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 133 --QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK---------- 180
QI + +LHS ++HRDLK NIF + VK+GD GL + +
Sbjct: 124 FLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 181 --SHAAHC--VGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYS 226
++A H VGT +M+PE ++ +Y+ VDI+S G+ + E++ YP+S
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFS 228
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 100/222 (45%), Gaps = 43/222 (19%)
Query: 28 EILGKGASKTVYR-AFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
E++G+G VY+ + DE VA VK++ F + I+ + ++H NI
Sbjct: 19 ELIGRGRYGAVYKGSLDERP---VA---VKVFSFANRQNFINE--KNIYRVPLMEHDNIA 70
Query: 87 KFYTSWVD---TANRNINF--VTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
+F D TA+ + + V E + +G+L +Y H + + +L + RGL YL
Sbjct: 71 RFIVG--DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRL-AHSVTRGLAYL 127
Query: 142 HS-------HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSH----------AA 184
H+ + P + HRDL N+ V N G I D GL+ L + A
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVK-NDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186
Query: 185 HCVGTPEFMAPEVYEEAYN--------ELVDIYSFGMCILEM 218
VGT +MAPEV E A N + VD+Y+ G+ E+
Sbjct: 187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 96/223 (43%), Gaps = 50/223 (22%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLY---CEIHLLKTLKHK 83
E +GKG V+R ++ G EVA VK++ + ER + EI+ L+H+
Sbjct: 34 QESIGKGRFGEVWRG--KWRGEEVA---VKIFSSRE-----ERSWFREAEIYQTVMLRHE 83
Query: 84 NIMKFYTS-------WVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILR 136
NI+ F + W + V++ G+L Y L V + +
Sbjct: 84 NILGFIAADNKDNGTWT-----QLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLALSTAS 137
Query: 137 GLLYLHSH------DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA------ 184
GL +LH P + HRDLK NI V N G I DLGLA +R A
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDIA 194
Query: 185 --HCVGTPEFMAPEVYEEAYN-------ELVDIYSFGMCILEM 218
H VGT +MAPEV +++ N + DIY+ G+ E+
Sbjct: 195 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 25/236 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G + V+ + Y G +V + Q + E +L+K L+H+ +++
Sbjct: 19 ERLGAGQAGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
Y I +TE +G+L + + + KL QI G+ ++ +
Sbjct: 73 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEA- 201
IHRDL+ NI V+ + KI D GLA ++ + G ++ APE
Sbjct: 130 --YIHRDLRAANILVS-DTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGT 186
Query: 202 YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQI------YKKVVSGKKPDSLYRV 250
+ D++SFG+ + E+VT PY T+P I Y+ V P+ LY++
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 242
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+GKG V+ ++ G +VA VK+ F + E EI+ ++H+NI+ F
Sbjct: 45 IGKGRYGEVW--MGKWRGEKVA---VKV--FFTTEEASWFRETEIYQTVLMRHENILGFI 97
Query: 90 TSWVDTANR--NINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH--- 144
+ + + +T+ +G+L Y LK ++ +++ + GL +LH+
Sbjct: 98 AADIKGTGSWTQLYLITDYHENGSLYDY-LKSTTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 145 ---DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHC-----VGTPEFMAP 195
P + HRDLK NI V N G I DLGLA + ++ VGT +M P
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 196 EVYEEAYNE-------LVDIYSFGMCILEM 218
EV +E+ N + D+YSFG+ + E+
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 94/217 (43%), Gaps = 38/217 (17%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
E +GKG V+R ++ G EVA VK++ + EI+ L+H+NI+
Sbjct: 9 QESIGKGRFGEVWRG--KWRGEEVA---VKIFSSREERSWFRE--AEIYQTVMLRHENIL 61
Query: 87 KFYTSWVDTANR----NINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLH 142
F + D + + V++ G+L Y L V + + GL +LH
Sbjct: 62 GFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLALSTASGLAHLH 118
Query: 143 SH------DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA--------HCVG 188
P + HRDLK NI V N G I DLGLA +R A H VG
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDIAPNHRVG 175
Query: 189 TPEFMAPEVYEEAYN-------ELVDIYSFGMCILEM 218
T +MAPEV +++ N + DIY+ G+ E+
Sbjct: 176 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 94/217 (43%), Gaps = 38/217 (17%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
E +GKG V+R ++ G EVA VK++ + EI+ L+H+NI+
Sbjct: 14 QESIGKGRFGEVWRG--KWRGEEVA---VKIFSSREERSWFRE--AEIYQTVMLRHENIL 66
Query: 87 KFYTSWVDTANRN----INFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLH 142
F + D + + V++ G+L Y L V + + GL +LH
Sbjct: 67 GFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLALSTASGLAHLH 123
Query: 143 SH------DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA--------HCVG 188
P + HRDLK NI V N G I DLGLA +R A H VG
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDIAPNHRVG 180
Query: 189 TPEFMAPEVYEEAYN-------ELVDIYSFGMCILEM 218
T +MAPEV +++ N + DIY+ G+ E+
Sbjct: 181 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 60
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + M L + + + + +
Sbjct: 61 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSF 119
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 120 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 177
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 229
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 230 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + E VK+ + EDL L E+ ++K + KHKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQY----------------RLKHKRVNIRAVK 128
I+ + T + + + E + G LR+Y R+ +++ + +
Sbjct: 103 IINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAA 184
Q+ RG+ YL S IHRDL N+ V N +KI D GLA +
Sbjct: 161 SCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYYKKTT 217
Query: 185 HCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 94/217 (43%), Gaps = 38/217 (17%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
E +GKG V+R ++ G EVA VK++ + EI+ L+H+NI+
Sbjct: 11 QESIGKGRFGEVWRG--KWRGEEVA---VKIFSSREERSWFRE--AEIYQTVMLRHENIL 63
Query: 87 KFYTSWVDTANRN----INFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLH 142
F + D + + V++ G+L Y L V + + GL +LH
Sbjct: 64 GFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLALSTASGLAHLH 120
Query: 143 SH------DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA--------HCVG 188
P + HRDLK NI V N G I DLGLA +R A H VG
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDIAPNHRVG 177
Query: 189 TPEFMAPEVYEEAYN-------ELVDIYSFGMCILEM 218
T +MAPEV +++ N + DIY+ G+ E+
Sbjct: 178 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 136 RGLLYLHSH-DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL--RKSHAAHCV-GTPE 191
RGL YLH H DP +IHRD+K NI ++ + E +GD GLA ++ + H V GT
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIG 208
Query: 192 FMAPEVYEEAY-NELVDIYSFGMCILEMVTFEYPY 225
+APE +E D++ +G+ +LE++T + +
Sbjct: 209 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 136/311 (43%), Gaps = 26/311 (8%)
Query: 15 VEVDPTGRYGRYN--EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYC 72
VEV Y Y+ E LG GA V+R +E A +V + F+ +P L++
Sbjct: 42 VEVKQGSVYDYYDILEELGSGAFGVVHRC------VEKATGRVFVAKFINTPYPLDKYTV 95
Query: 73 --EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL- 129
EI ++ L H ++ + ++ D + + E + G L R+ + + ++
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFED--KYEMVLILEFLSGGELFD-RIAAEDYKMSEAEVI 152
Query: 130 -WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQG-EVKIGDLGLAAILRKSHAAHC- 186
+ RQ GL ++H H ++H D+K +NI + VKI D GLA L
Sbjct: 153 NYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT 210
Query: 187 VGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS--ECTHPAQIYKKVVSGKK 243
T EF APE+ + E D+++ G+ +++ P++ + Q K+
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 270
Query: 244 PDSLYRVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQIDDCESNLRSLDYSRELDDM 302
D+ V PE + F++ L RL+ + L P+L+ D SNL S S + +
Sbjct: 271 EDAFSSV-SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD--HSNLTSRIPSSRYNKI 327
Query: 303 DPLIRQPHIDF 313
I++ + D+
Sbjct: 328 RQKIKEKYADW 338
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 129/298 (43%), Gaps = 34/298 (11%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + E VK+ + +DL L E+ ++K + KHKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQY----------------RLKHKRVNIRAVK 128
I+ + T + + + E + G LR+Y R+ +++ + +
Sbjct: 103 IINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA----ILRKSHAA 184
Q+ RG+ YL S IHRDL N+ V N +KI D GLA I
Sbjct: 161 SCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDXXKKTT 217
Query: 185 HCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK 243
+ ++MAPE +++ Y D++SFG+ + E+ T +++K + G +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 244 PDSLYRVKDPEVRRFVEKCL-ATVSLRLSARELLNDPFLQIDDCESNLRSLDYSRELD 300
D + E+ + C A S R + ++L+ D +I +N LD S+ L+
Sbjct: 278 MDKPANCTN-ELYMMMRDCWHAVPSQRPTFKQLVED-LDRILTLTTNEEYLDLSQPLE 333
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 129/298 (43%), Gaps = 34/298 (11%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + E VK+ + +DL L E+ ++K + KHKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQY----------------RLKHKRVNIRAVK 128
I+ + T + + + E + G LR+Y R+ +++ + +
Sbjct: 103 IINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA----ILRKSHAA 184
Q+ RG+ YL S IHRDL N+ V N +KI D GLA I
Sbjct: 161 SCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDXXKKTT 217
Query: 185 HCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK 243
+ ++MAPE +++ Y D++SFG+ + E+ T +++K + G +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 244 PDSLYRVKDPEVRRFVEKCL-ATVSLRLSARELLNDPFLQIDDCESNLRSLDYSRELD 300
D + E+ + C A S R + ++L+ D +I +N LD S+ L+
Sbjct: 278 MDKPANCTN-ELYMMMRDCWHAVPSQRPTFKQLVED-LDRILTLTTNEEYLDLSQPLE 333
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRL-KHKRVNIRAVKL-- 129
EI LL+ LKH N++ ++ A+R + + + + + + N + V+L
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 130 -----WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNG---NQGEVKIGDLGLAAILRK- 180
QIL G+ YLH++ V+HRDLK NI V G +G VKI D+G A +
Sbjct: 128 GMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 181 ----SHAAHCVGTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPYSEC 228
+ V T + APE+ A Y + +DI++ G E++T E P C
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHC 238
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 94/217 (43%), Gaps = 38/217 (17%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
E +GKG V+R ++ G EVA VK++ + EI+ L+H+NI+
Sbjct: 8 QESIGKGRFGEVWRG--KWRGEEVA---VKIFSSREERSWFRE--AEIYQTVMLRHENIL 60
Query: 87 KFYTSWVDTANR----NINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLH 142
F + D + + V++ G+L Y L V + + GL +LH
Sbjct: 61 GFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLALSTASGLAHLH 117
Query: 143 SH------DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA--------HCVG 188
P + HRDLK NI V N G I DLGLA +R A H VG
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDIAPNHRVG 174
Query: 189 TPEFMAPEVYEEAYN-------ELVDIYSFGMCILEM 218
T +MAPEV +++ N + DIY+ G+ E+
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
ED++ + E H+ + + + S T +R + FV E G L + + +++
Sbjct: 94 EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPE 152
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSH 182
+ + +I L YLH +I+RDLK DN+ ++ ++G +K+ D G+ +
Sbjct: 153 EHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDT 209
Query: 183 AAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPY 225
+ GTP ++APE+ E Y VD ++ G+ + EM+ P+
Sbjct: 210 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 45/291 (15%)
Query: 21 GRYGRY--NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ----SPEDLERL---- 70
G Y Y EILG+G S V R + E A VK+ D S E+++ L
Sbjct: 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYA---VKIIDVTGGGSFSAEEVQELREAT 70
Query: 71 YCEIHLLKTLK-HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL 129
E+ +L+ + H NI++ ++ N V ++ G L Y + ++ + +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-G 188
R +L + LH + ++HRDLK +NI ++ + +K+ D G + L V G
Sbjct: 129 IMRALLEVICALHKLN--IVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLREVCG 185
Query: 189 TPEFMAPEVYE-------EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQ--IYKKVV 239
TP ++APE+ E Y + VD++S G+ + ++ P+ H Q + + ++
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF---WHRKQMLMLRMIM 242
Query: 240 SGKKPDSLYRVKDPE-------VRRFVEKCLATV-SLRLSARELLNDPFLQ 282
SG Y+ PE V+ V + L R +A E L PF Q
Sbjct: 243 SGN-----YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
ED++ + E H+ + + + S T +R + FV E G L + + +++
Sbjct: 62 EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPE 120
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSH 182
+ + +I L YLH +I+RDLK DN+ ++ ++G +K+ D G+ +
Sbjct: 121 EHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDT 177
Query: 183 AAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPY 225
+ GTP ++APE+ E Y VD ++ G+ + EM+ P+
Sbjct: 178 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
ED++ + E H+ + + + S T +R + FV E G L + + +++
Sbjct: 51 EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPE 109
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSH 182
+ + +I L YLH +I+RDLK DN+ ++ ++G +K+ D G+ +
Sbjct: 110 EHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDT 166
Query: 183 AAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPY 225
+ GTP ++APE+ E Y VD ++ G+ + EM+ P+
Sbjct: 167 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 66 DLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIR 125
D R E +L + H ++K + ++ + + + G L K
Sbjct: 73 DRVRTKMERDILADVNHPFVVKLHYAF--QTEGKLYLILDFLRGGDLFTRLSKEVMFTEE 130
Query: 126 AVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHA 183
VK + ++ GL +LHS +I+RDLK +NI ++ +G +K+ D GL+ AI + A
Sbjct: 131 DVKFYLAELALGLDHLHSLG--IIYRDLKPENILLD-EEGHIKLTDFGLSKEAIDHEKKA 187
Query: 184 AHCVGTPEFMAPEVY-EEAYNELVDIYSFGMCILEMVTFEYPY 225
GT E+MAPEV + ++ D +S+G+ + EM+T P+
Sbjct: 188 YSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 138/315 (43%), Gaps = 61/315 (19%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLER-LYCEIHLLKTLK-H 82
R +L +G VY A D G E A L L + E+ R + E+ +K L H
Sbjct: 31 RVRRVLAEGGFAFVYEAQDVGSGREYA-----LKRLLSNEEEKNRAIIQEVCFMKKLSGH 85
Query: 83 KNIMKFYTSWV------DTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQIL- 135
NI++F ++ DT +TE+ G L ++ K++ R L C +L
Sbjct: 86 PNIVQFCSAASIGKEESDTGQAEFLLLTEL-CKGQLVEFL---KKMESRG-PLSCDTVLK 140
Query: 136 ------RGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----------- 178
R + ++H PP+IHRDLK +N+ ++ NQG +K+ D G A +
Sbjct: 141 IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS-NQGTIKLCDFGSATTISHYPDYSWSAQ 199
Query: 179 RKSHAAHCV---GTPEFMAPEVYEEAYN----ELVDIYSFGMCILEMVTF-EYPYSECTH 230
R++ + TP + PE+ + N E DI++ G CIL ++ F ++P+ +
Sbjct: 200 RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG-CILYLLCFRQHPFEDGAK 258
Query: 231 PAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKCLATVSLRLSARELLNDPFLQIDDCESNL 290
++V+GK Y + + + V L L+++ E L+ I + L
Sbjct: 259 -----LRIVNGK-----YSIPPHDTQYTVFHSLIRAMLQVNPEERLS-----IAEVVHQL 303
Query: 291 RSLDYSRELDDMDPL 305
+ + +R ++ P+
Sbjct: 304 QEIAAARNVNPKSPI 318
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 132/280 (47%), Gaps = 46/280 (16%)
Query: 27 NEILGKGASKT-VYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLK-TLKHKN 84
++LG GA T VYR ++ +VA ++ PE E+ LL+ + +H N
Sbjct: 29 KDVLGHGAEGTIVYRGM--FDNRDVAVKRI-------LPECFSFADREVQLLRESDEHPN 79
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQY--RLKHKRVNIRAVKLWCRQILRGLLYLH 142
+++++ + D R ++ + TL++Y + + + + L +Q GL +LH
Sbjct: 80 VIRYFCTEKD---RQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLL-QQTTSGLAHLH 135
Query: 143 SHDPPVIHRDLKCDNIFVN--GNQGEVK--IGDLGLA---AILRKSHA--AHCVGTPEFM 193
S + ++HRDLK NI ++ G++K I D GL A+ R S + + GT ++
Sbjct: 136 SLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193
Query: 194 APEVYEEAYNE----LVDIYSFGMCILEMVTFEYPYSECTHP----AQIYKKVVSGK-KP 244
APE+ E E VDI+S G C+ F Y SE +HP Q ++ G
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAG-CV-----FYYVISEGSHPFGKSLQRQANILLGACSL 247
Query: 245 DSLYRVKDPEV--RRFVEKCLAT-VSLRLSARELLNDPFL 281
D L+ K +V R +EK +A R SA+ +L PF
Sbjct: 248 DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI 124
ED++ + E H+ + + + S T +R + FV E G L + + +++
Sbjct: 47 EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPE 105
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSH 182
+ + +I L YLH +I+RDLK DN+ ++ ++G +K+ D G+ +
Sbjct: 106 EHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDT 162
Query: 183 AAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPY 225
+ GTP ++APE+ E Y VD ++ G+ + EM+ P+
Sbjct: 163 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 45/291 (15%)
Query: 21 GRYGRY--NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQ----SPEDLERL---- 70
G Y Y EILG+G S V R + E A VK+ D S E+++ L
Sbjct: 1 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYA---VKIIDVTGGGSFSAEEVQELREAT 57
Query: 71 YCEIHLLKTLK-HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL 129
E+ +L+ + H NI++ ++ N V ++ G L Y + ++ + +
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 115
Query: 130 WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-G 188
R +L + LH + ++HRDLK +NI ++ + +K+ D G + L V G
Sbjct: 116 IMRALLEVICALHKLN--IVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLREVCG 172
Query: 189 TPEFMAPEVYE-------EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQ--IYKKVV 239
TP ++APE+ E Y + VD++S G+ + ++ P+ H Q + + ++
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF---WHRKQMLMLRMIM 229
Query: 240 SGKKPDSLYRVKDPE-------VRRFVEKCLATV-SLRLSARELLNDPFLQ 282
SG Y+ PE V+ V + L R +A E L PF Q
Sbjct: 230 SGN-----YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G V+ + Y G +V + Q + E +L+K L+H+ +++
Sbjct: 25 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
Y I +TE +G+L + + + KL QI G+ ++ +
Sbjct: 79 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEA- 201
IHRDL+ NI V+ + KI D GLA ++ + G ++ APE
Sbjct: 136 --YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 192
Query: 202 YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQI------YKKVVSGKKPDSLYRV 250
+ D++SFG+ + E+VT PY T+P I Y+ V P+ LY++
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 248
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G V+ + Y G +V + Q + E +L+K L+H+ +++
Sbjct: 27 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 80
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
Y I +TE +G+L + + + KL QI G+ ++ +
Sbjct: 81 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 137
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEA- 201
IHRDL+ NI V+ + KI D GLA ++ + G ++ APE
Sbjct: 138 --YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 194
Query: 202 YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQI------YKKVVSGKKPDSLYRV 250
+ D++SFG+ + E+VT PY T+P I Y+ V P+ LY++
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 250
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 31/218 (14%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + E VK+ + +DL L E+ ++K + KHKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQY----------------RLKHKRVNIRAVK 128
I+ + T + + + E + G LR+Y R+ +++ + +
Sbjct: 103 IINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAA 184
Q+ RG+ YL S IHRDL N+ V N +KI D GLA + +
Sbjct: 161 SCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYYKNTT 217
Query: 185 HCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 22/233 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
EILG G V+ A D + +VA ++ D + P R E L H I+
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRA-DLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 87 KFY-TSWVDTANRNINFVTEMFTSG-TLR-----QYRLKHKRVNIRAVKLWCRQILRGLL 139
Y T +T + ++ + G TLR + + KR I + C+ +
Sbjct: 76 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA-IEVIADACQALN---- 130
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS-----HAAHCVGTPEFMA 194
SH +IHRD+K NI ++ VK+ D G+A + S A +GT ++++
Sbjct: 131 --FSHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 195 PE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDS 246
PE ++ + D+YS G + E++T E P++ + + Y+ V P S
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPS 240
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 25 RYNEILGKGASKTVYRAFDEYEG----IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL 80
R ++LG GA TVY+ +G I VA +K+ SP+ + + E +++ +
Sbjct: 20 RKVKVLGSGAFGTVYKGIWIPDGENVKIPVA---IKVLRENTSPKANKEILDEAYVMAGV 76
Query: 81 KHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWCRQILRGLL 139
+ + + + + VT++ G L + R R+ + + WC QI +G+
Sbjct: 77 GSPYVSRLLGICLTS---TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMS 133
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCVGTPEFMAP 195
YL D ++HRDL N+ V + VKI D GLA +L + HA ++MA
Sbjct: 134 YL--EDVRLVHRDLAARNVLVK-SPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 196 E-VYEEAYNELVDIYSFGMCILEMVTF 221
E + + D++S+G+ + E++TF
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMTF 217
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 26/233 (11%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG G VY + + VA +K + ++E E ++K +KH N+++
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHDPP 147
V T +TE T G L Y + R + AV L QI + YL +
Sbjct: 74 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-- 129
Query: 148 VIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEAYNE 204
IHRDL N V N VK+ D GL+ ++ G ++ APE AYN+
Sbjct: 130 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL--AYNK 186
Query: 205 LV---DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
D+++FG+ + E+ T+ P+Q+Y+ + + YR++ PE
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL------EKDYRMERPE 233
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G V+ + Y G +V + Q + E +L+K L+H+ +++
Sbjct: 19 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
Y I +TE +G+L + + + KL QI G+ ++ +
Sbjct: 73 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEA- 201
IHRDL+ NI V+ + KI D GLA ++ + G ++ APE
Sbjct: 130 --YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 202 YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQI------YKKVVSGKKPDSLYRV 250
+ D++SFG+ + E+VT PY T+P I Y+ V P+ LY++
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 242
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 22/233 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
EILG G V+ A D + +VA ++ D + P R E L H I+
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRA-DLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 87 KFY-TSWVDTANRNINFVTEMFTSG-TLR-----QYRLKHKRVNIRAVKLWCRQILRGLL 139
Y T +T + ++ + G TLR + + KR I + C+ +
Sbjct: 76 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA-IEVIADACQALN---- 130
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS-----HAAHCVGTPEFMA 194
SH +IHRD+K NI ++ VK+ D G+A + S A +GT ++++
Sbjct: 131 --FSHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 195 PE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDS 246
PE ++ + D+YS G + E++T E P++ + + Y+ V P S
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 22/233 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
EILG G V+ A D + +VA ++ D + P R E L H I+
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRA-DLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 87 KFY-TSWVDTANRNINFVTEMFTSG-TLR-----QYRLKHKRVNIRAVKLWCRQILRGLL 139
Y T +T + ++ + G TLR + + KR I + C+ +
Sbjct: 76 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA-IEVIADACQALN---- 130
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS-----HAAHCVGTPEFMA 194
SH +IHRD+K NI ++ VK+ D G+A + S A +GT ++++
Sbjct: 131 --FSHQNGIIHRDVKPANILISATNA-VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLS 187
Query: 195 PE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDS 246
PE ++ + D+YS G + E++T E P++ + + Y+ V P S
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G V+ + Y G +V + Q + E +L+K L+H+ +++
Sbjct: 28 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 81
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
Y I +TE +G+L + + + KL QI G+ ++ +
Sbjct: 82 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 138
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEA- 201
IHRDL+ NI V+ + KI D GLA ++ + G ++ APE
Sbjct: 139 --YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 195
Query: 202 YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQI------YKKVVSGKKPDSLYRV 250
+ D++SFG+ + E+VT PY T+P I Y+ V P+ LY++
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 251
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S E++ER E+++L+ ++H NI+ + + + + + + E+ + G L + + + +
Sbjct: 72 SREEIER---EVNILREIRHPNIITLHDIFENKTD--VVLILELVSGGELFDFLAEKESL 126
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N +K+ D G+A I
Sbjct: 127 TEDEATQFLKQILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 184
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPY 225
+ + GTPEF+APE+ E D++S G+ +++ P+
Sbjct: 185 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S E++ER E+++L+ ++H NI+ + + + + + + E+ + G L + + + +
Sbjct: 51 SREEIER---EVNILREIRHPNIITLHDIFENKTD--VVLILELVSGGELFDFLAEKESL 105
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N +K+ D G+A I
Sbjct: 106 TEDEATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPY 225
+ + GTPEF+APE+ E D++S G+ +++ P+
Sbjct: 164 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + E VK+ + +DL L E+ ++K + KHKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQY----------------RLKHKRVNIRAVK 128
I+ + T + + + E + G LR+Y R+ +++ + +
Sbjct: 103 IITLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAA 184
Q+ RG+ YL S IHRDL N+ V N +KI D GLA +
Sbjct: 161 SCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYYKKTT 217
Query: 185 HCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV 122
S E++ER E+++L+ ++H NI+ + + + + + + E+ + G L + + + +
Sbjct: 58 SREEIER---EVNILREIRHPNIITLHDIFENKTD--VVLILELVSGGELFDFLAEKESL 112
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AIL 178
+ +QIL G+ YLHS + H DLK +NI + N +K+ D G+A I
Sbjct: 113 TEDEATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 170
Query: 179 RKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPY 225
+ + GTPEF+APE+ E D++S G+ +++ P+
Sbjct: 171 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G V+ + Y G +V + Q + E +L+K L+H+ +++
Sbjct: 21 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 74
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
Y I +TE +G+L + + + KL QI G+ ++ +
Sbjct: 75 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 131
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEA- 201
IHRDL+ NI V+ + KI D GLA ++ + G ++ APE
Sbjct: 132 --YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 188
Query: 202 YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQI------YKKVVSGKKPDSLYRV 250
+ D++SFG+ + E+VT PY T+P I Y+ V P+ LY++
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 244
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 26/233 (11%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG G VY + + VA +K + ++E E ++K +KH N+++
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHDPP 147
V T +TE T G L Y + R + AV L QI + YL +
Sbjct: 74 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-- 129
Query: 148 VIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEAYNE 204
IHRDL N V N VK+ D GL+ ++ G ++ APE AYN+
Sbjct: 130 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESL--AYNK 186
Query: 205 LV---DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
D+++FG+ + E+ T+ P+Q+Y+ + + YR++ PE
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL------EKDYRMERPE 233
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + E VK+ + +DL L E+ ++K + KHKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQY----------------RLKHKRVNIRAVK 128
I+ + T + + + E + G LR+Y R+ +++ + +
Sbjct: 103 IIHLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAA 184
Q+ RG+ YL S IHRDL N+ V N +KI D GLA +
Sbjct: 161 SCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYYKKTT 217
Query: 185 HCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G V+ + Y G +V + Q + E +L+K L+H+ +++
Sbjct: 19 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
Y I +TE +G+L + + + KL QI G+ ++ +
Sbjct: 73 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEA- 201
IHRDL+ NI V+ + KI D GLA ++ + G ++ APE
Sbjct: 130 --YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 202 YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQI------YKKVVSGKKPDSLYRV 250
+ D++SFG+ + E+VT PY T+P I Y+ V P+ LY++
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 242
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G V+ + Y G +V + Q + E +L+K L+H+ +++
Sbjct: 20 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 73
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
Y I +TE +G+L + + + KL QI G+ ++ +
Sbjct: 74 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 130
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEA- 201
IHRDL+ NI V+ + KI D GLA ++ + G ++ APE
Sbjct: 131 --YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 187
Query: 202 YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQI------YKKVVSGKKPDSLYRV 250
+ D++SFG+ + E+VT PY T+P I Y+ V P+ LY++
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 243
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 29/230 (12%)
Query: 25 RYNEILGKGASKTVYRA-FDEYEG--IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
R E LG G+ V R +D G + VA +K D L PE ++ E++ + +L
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLD 79
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLY 140
H+N+++ Y + VTE+ G+L KH+ + + + Q+ G+ Y
Sbjct: 80 HRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 141 LHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL------------RKSHAAHCVG 188
L S IHRDL N+ + + VKIGD GL L RK A C
Sbjct: 137 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC-- 191
Query: 189 TPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV 238
PE + + A D + FG+ + EM T+ + +QI K+
Sbjct: 192 APESLKTRTFSHAS----DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G V+ + Y G +V + Q + E +L+K L+H+ +++
Sbjct: 29 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 82
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
Y I +TE +G+L + + + KL QI G+ ++ +
Sbjct: 83 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 139
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEA- 201
IHRDL+ NI V+ + KI D GLA ++ + G ++ APE
Sbjct: 140 --YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 196
Query: 202 YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQI------YKKVVSGKKPDSLYRV 250
+ D++SFG+ + E+VT PY T+P I Y+ V P+ LY++
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 252
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 136 RGLLYLHSH-DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL--RKSHAAHCV-GTPE 191
RGL YLH H DP +IHRD+K NI ++ + E +GD GLA ++ + H V G
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIG 200
Query: 192 FMAPEVYEEAY-NELVDIYSFGMCILEMVTFEYPY 225
+APE +E D++ +G+ +LE++T + +
Sbjct: 201 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 124 IRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA 183
I+ +K + +L Y+H ++ + HRD+K NI ++ N G VK+ D G + +
Sbjct: 150 IQVIKCIIKSVLNSFSYIH-NEKNICHRDVKPSNILMDKN-GRVKLSDFGESEYMVDKKI 207
Query: 184 AHCVGTPEFMAPEVY--EEAYN-ELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV 238
GT EFM PE + E +YN VDI+S G+C+ M P+S +++ +
Sbjct: 208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 20/195 (10%)
Query: 67 LERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA 126
+E E +++KTL+H ++K + I +TE G+L + +
Sbjct: 227 VEAFLAEANVMKTLQHDKLVKLHAV---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 283
Query: 127 VKL--WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
KL + QI G+ ++ + IHRDL+ NI V+ + KI D GLA ++ +
Sbjct: 284 PKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYT 340
Query: 185 HCVGTP---EFMAPEVYE-EAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVV 239
G ++ APE ++ D++SFG+ ++E+VT+ PY ++P ++ + +
Sbjct: 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-EVIRALE 399
Query: 240 SGKKPDSLYRVKDPE 254
G YR+ PE
Sbjct: 400 RG------YRMPRPE 408
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 29/230 (12%)
Query: 25 RYNEILGKGASKTVYRA-FDEYEG--IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
R E LG G+ V R +D G + VA +K D L PE ++ E++ + +L
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLD 73
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLY 140
H+N+++ Y + VTE+ G+L KH+ + + + Q+ G+ Y
Sbjct: 74 HRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 141 LHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL------------RKSHAAHCVG 188
L S IHRDL N+ + + VKIGD GL L RK A C
Sbjct: 131 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC-- 185
Query: 189 TPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV 238
PE + + A D + FG+ + EM T+ + +QI K+
Sbjct: 186 APESLKTRTFSHAS----DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 29/230 (12%)
Query: 25 RYNEILGKGASKTVYRA-FDEYEG--IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
R E LG G+ V R +D G + VA +K D L PE ++ E++ + +L
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLD 79
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLY 140
H+N+++ Y + VTE+ G+L KH+ + + + Q+ G+ Y
Sbjct: 80 HRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 141 LHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL------------RKSHAAHCVG 188
L S IHRDL N+ + + VKIGD GL L RK A C
Sbjct: 137 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC-- 191
Query: 189 TPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV 238
PE + + A D + FG+ + EM T+ + +QI K+
Sbjct: 192 APESLKTRTFSHAS----DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G V+ + Y G +V + Q + E +L+K L+H+ +++
Sbjct: 24 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 77
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
Y I +TE +G+L + + + KL QI G+ ++ +
Sbjct: 78 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 134
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEA- 201
IHRDL+ NI V+ + KI D GLA ++ + G ++ APE
Sbjct: 135 --YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 191
Query: 202 YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQI------YKKVVSGKKPDSLYRV 250
+ D++SFG+ + E+VT PY T+P I Y+ V P+ LY++
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 247
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G V+ + Y G +V + Q + E +L+K L+H+ +++
Sbjct: 25 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
Y I +TE +G+L + + + KL QI G+ ++ +
Sbjct: 79 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEA- 201
IHRDL+ NI V+ + KI D GLA ++ + G ++ APE
Sbjct: 136 --YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 192
Query: 202 YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQI------YKKVVSGKKPDSLYRV 250
+ D++SFG+ + E+VT PY T+P I Y+ V P+ LY++
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 248
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 110
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 171 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 228
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELL 251
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 21/276 (7%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSP-----EDLERLYCEIHLLKTLKH 82
E LG G V + ++ G+E A +K S E++ER E+ +L+ + H
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIER---EVSILRQVLH 74
Query: 83 KNIMKFYTSWVDTANR-NINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
NI+ + + NR ++ + E+ + G L + + + ++ + +QIL G+ YL
Sbjct: 75 PNIITLHDVY---ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 142 HSHDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AILRKSHAAHCVGTPEFMAPEV 197
H+ + H DLK +NI + N +K+ D GLA I + GTPEF+APE+
Sbjct: 132 HT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 198 YE-EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVR 256
E D++S G+ +++ P+ T + D + + E+
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELA 249
Query: 257 R-FVEKCLAT-VSLRLSARELLNDPFLQIDDCESNL 290
+ F+ K L RL+ +E L P++ D + +
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAM 285
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 114
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 175 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 232
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELL 255
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 112
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 173 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 230
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELL 253
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 148 VIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC--VGTPEFMAPEVYEEA 201
+IHRD+K NI ++ G +K+ D G++ L K+ A C PE + P +
Sbjct: 147 IIHRDIKPSNILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQG 205
Query: 202 YNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKP---DSLYRVKDPEVRRF 258
Y+ D++S G+ + E+ T +PY + +VV G P +S R P F
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINF 265
Query: 259 VEKCLAT-VSLRLSARELLNDPFL 281
V CL S R +ELL PF+
Sbjct: 266 VNLCLTKDESKRPKYKELLKHPFI 289
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 104
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 165 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 222
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 223 FGATDYTSSIDVWSAGCVLAELL 245
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQGKAFKNR---ELQIMRKLDHCNIV 76
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + + R Y + + + VKL+ Q+ R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELL 217
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + E VK+ + +DL L E+ ++K + KHKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQY----------------RLKHKRVNIRAVK 128
I+ + T + + + E + G LR+Y R+ +++ + +
Sbjct: 103 IINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAA 184
Q+ RG+ YL S IHRDL N+ V N ++I D GLA +
Sbjct: 161 SCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMRIADFGLARDINNIDYYKKTT 217
Query: 185 HCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 76
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 77 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 136 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 245
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 246 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 110
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 171 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 228
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELL 251
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 155
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 216 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 273
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 274 FGATDYTSSIDVWSAGCVLAELL 296
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 29/230 (12%)
Query: 25 RYNEILGKGASKTVYRA-FDEYEG--IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
R E LG G+ V R +D G + VA +K D L PE ++ E++ + +L
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLD 69
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLY 140
H+N+++ Y + VTE+ G+L KH+ + + + Q+ G+ Y
Sbjct: 70 HRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 141 LHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL------------RKSHAAHCVG 188
L S IHRDL N+ + + VKIGD GL L RK A C
Sbjct: 127 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC-- 181
Query: 189 TPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV 238
PE + + A D + FG+ + EM T+ + +QI K+
Sbjct: 182 APESLKTRTFSHAS----DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 75
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 76 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 135 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 192
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 244
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 245 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G V+ + Y G +V + Q + E +L+K L+H+ +++
Sbjct: 19 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
Y I +TE +G+L + + + KL QI G+ ++ +
Sbjct: 73 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEA- 201
IHRDL+ NI V+ + KI D GLA ++ + G ++ APE
Sbjct: 130 --YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 186
Query: 202 YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQI------YKKVVSGKKPDSLYRV 250
+ D++SFG+ + E+VT PY T+P I Y+ V P+ LY++
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 242
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 127/276 (46%), Gaps = 18/276 (6%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLER--LYCEIHLLKTLKHKNI 85
E LG G V + ++ G+E A +K S + R + E+ +L+ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 86 MKFYTSWVDTANR-NINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+ + + NR ++ + E+ + G L + + + ++ + +QIL G+ YLH+
Sbjct: 78 ITLHDVY---ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT- 133
Query: 145 DPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AILRKSHAAHCVGTPEFMAPEV--Y 198
+ H DLK +NI + N +K+ D GLA I + GTPEF+APE+ Y
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRR- 257
E E D++S G+ +++ P+ T + D + + E+ +
Sbjct: 193 EPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 258 FVEKCLAT-VSLRLSARELLNDPFLQ-IDDCESNLR 291
F+ K L RL+ +E L P++ +D+ ++ +R
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR 287
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 29/230 (12%)
Query: 25 RYNEILGKGASKTVYRA-FDEYEG--IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
R E LG G+ V R +D G + VA +K D L PE ++ E++ + +L
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLD 73
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLY 140
H+N+++ Y + VTE+ G+L KH+ + + + Q+ G+ Y
Sbjct: 74 HRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 141 LHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL------------RKSHAAHCVG 188
L S IHRDL N+ + + VKIGD GL L RK A C
Sbjct: 131 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC-- 185
Query: 189 TPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV 238
PE + + A D + FG+ + EM T+ + +QI K+
Sbjct: 186 APESLKTRTFSHAS----DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 95
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 96 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 155 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 212
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 264
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 265 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 127/276 (46%), Gaps = 18/276 (6%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLER--LYCEIHLLKTLKHKNI 85
E LG G V + ++ G+E A +K S + R + E+ +L+ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 86 MKFYTSWVDTANR-NINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+ + + NR ++ + E+ + G L + + + ++ + +QIL G+ YLH+
Sbjct: 78 ITLHDVY---ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT- 133
Query: 145 DPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AILRKSHAAHCVGTPEFMAPEV--Y 198
+ H DLK +NI + N +K+ D GLA I + GTPEF+APE+ Y
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRR- 257
E E D++S G+ +++ P+ T + D + + E+ +
Sbjct: 193 EPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 258 FVEKCLAT-VSLRLSARELLNDPFLQ-IDDCESNLR 291
F+ K L RL+ +E L P++ +D+ ++ +R
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR 287
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 34/239 (14%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPED-LERLYCEIHLLKTLKHKNI 85
E++GKG VY + G EVA ++L D + ED L+ E+ + +H+N+
Sbjct: 38 GELIGKGRFGQVYHG--RWHG-EVA---IRLIDIERDNEDQLKAFKREVMAYRQTRHENV 91
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRV-NIRAVKLWCRQILRGLLYLHSH 144
+ F + + + I +T + TL K V ++ + ++I++G+ YLH+
Sbjct: 92 VLFMGACMSPPHLAI--ITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK 149
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAI------------LRKSHAAHCVGTPEF 192
++H+DLK N+F + G+V I D GL +I LR + C PE
Sbjct: 150 G--ILHKDLKSKNVFY--DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEI 205
Query: 193 ---MAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPYSECTHPAQ-IYKKVVSGKKPD 245
++P+ E+ +++ D+++ G E+ E+P+ T PA+ I ++ +G KP+
Sbjct: 206 IRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK--TQPAEAIIWQMGTGMKPN 262
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 61
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 62 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 121 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 230
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 231 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 92/213 (43%), Gaps = 29/213 (13%)
Query: 25 RYNEILGKGASKTVYRA-FDEYEG--IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
R E LG G+ V R +D G + VA +K D L PE ++ E++ + +L
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLD 69
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLY 140
H+N+++ Y + VTE+ G+L KH+ + + + Q+ G+ Y
Sbjct: 70 HRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 141 LHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL------------RKSHAAHCVG 188
L S IHRDL N+ + + VKIGD GL L RK A C
Sbjct: 127 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC-- 181
Query: 189 TPEFMAPEVYEEAYNELVDIYSFGMCILEMVTF 221
PE + + A D + FG+ + EM T+
Sbjct: 182 APESLKTRTFSHAS----DTWMFGVTLWEMFTY 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G V+ + Y G +V + Q + E +L+K L+H+ +++
Sbjct: 14 ERLGAGQFGEVWMGY--YNG----HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 67
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
Y I +TE +G+L + + + KL QI G+ ++ +
Sbjct: 68 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 124
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEA- 201
IHRDL+ NI V+ + KI D GLA ++ + G ++ APE
Sbjct: 125 --YIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 181
Query: 202 YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQI------YKKVVSGKKPDSLYRV 250
+ D++SFG+ + E+VT PY T+P I Y+ V P+ LY++
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 237
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 84
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 145 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 202
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELL 225
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA-HCVGTPEF 192
I++ L YL VIHRD+K NI ++ +G++K+ D G++ L A G +
Sbjct: 133 IVKALYYLKEKHG-VIHRDVKPSNILLD-ERGQIKLCDFGISGRLVDDKAKDRSAGCAAY 190
Query: 193 MAPEVYEEA------YNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKP 244
MAPE + Y+ D++S G+ ++E+ T ++PY C ++ KV+ + P
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPP 248
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 76
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 77 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 136 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 245
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 246 RVSX-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 88
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 149 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 206
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELL 229
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 60
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 61 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 119
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 120 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 177
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 229
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 230 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 20/195 (10%)
Query: 67 LERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA 126
+E E +++KTL+H ++K + I +TE G+L + +
Sbjct: 54 VEAFLAEANVMKTLQHDKLVKLHAV---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 110
Query: 127 VKL--WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
KL + QI G+ ++ + IHRDL+ NI V+ + KI D GLA ++ +
Sbjct: 111 PKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYT 167
Query: 185 HCVGTP---EFMAPEVYE-EAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVV 239
G ++ APE ++ D++SFG+ ++E+VT+ PY ++P ++ + +
Sbjct: 168 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-EVIRALE 226
Query: 240 SGKKPDSLYRVKDPE 254
G YR+ PE
Sbjct: 227 RG------YRMPRPE 235
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 95
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 156 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 213
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELL 236
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 103
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 104 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 163 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 220
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 272
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 273 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 75
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 76 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 135 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 192
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 244
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 245 RVSX-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 88
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 149 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 206
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELL 229
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 20/192 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E +L+KTL+H +++ Y V T I +TE G+L + + + KL +
Sbjct: 58 EANLMKTLQHDKLVRLYA--VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF 115
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + IHRDL+ N+ V+ + KI D GLA ++ + G
Sbjct: 116 SAQIAEGMAYIERKN--YIHRDLRAANVLVSESL-MCKIADFGLARVIEDNEYTAREGAK 172
Query: 191 ---EFMAPEVYEEA-YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK-- 243
++ APE + D++SFG+ + E+VT+ + PY T+ A + + G +
Sbjct: 173 FPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTN-ADVMTALSQGYRMP 231
Query: 244 -----PDSLYRV 250
PD LY +
Sbjct: 232 RVENCPDELYDI 243
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 61
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 62 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 121 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 230
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 231 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 129/299 (43%), Gaps = 36/299 (12%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + V VK+ + +DL L E+ ++K + KHKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-----------------VNIRAV 127
I+ + T + + + E + G LR+Y L+ +R ++ + +
Sbjct: 96 IINLLGAC--TQDGPLYVIVEYASKGNLREY-LQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 128 KLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA----ILRKSHA 183
Q+ RG+ YL S IHRDL N+ V + +KI D GLA I
Sbjct: 153 VSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDXXKKT 209
Query: 184 AHCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
+ ++MAPE +++ Y D++SFG+ + E+ T +++K + G
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 243 KPDSLYRVKDPEVRRFVEKCLATV-SLRLSARELLNDPFLQIDDCESNLRSLDYSRELD 300
+ D + E+ + C V S R + ++L+ D +I SN LD S LD
Sbjct: 270 RMDKPSNCTN-ELYMMMRDCWHAVPSQRPTFKQLVED-LDRIVALTSNQEXLDLSMPLD 326
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+G V A D+ + E VK+ + +DL L E+ ++K + KHKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQY----------------RLKHKRVNIRAVK 128
I+ + T + + + E + G LR+Y R+ +++ + +
Sbjct: 149 IINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAA 184
Q+ RG+ YL S IHRDL N+ V N +KI D GLA +
Sbjct: 207 SCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYYKKTT 263
Query: 185 HCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 301
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAA 184
VK + ++ L +LHS +I+RDLK +NI ++ +G +K+ D GL+ +I + A
Sbjct: 128 VKFYLAELALALDHLHSLG--IIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAY 184
Query: 185 HCVGTPEFMAPEVY-EEAYNELVDIYSFGMCILEMVTFEYPY 225
GT E+MAPEV + + D +SFG+ + EM+T P+
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 76
Query: 87 K----FYTSW----VDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGL 138
+ FY+S V N +++V E R Y + + + VKL+ Q+ R L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEV 197
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 136 AYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 198 YEEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 26/233 (11%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG G VY + + VA +K + ++E E ++K +KH N+++
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHDPP 147
V T + E T G L Y + R + AV L QI + YL +
Sbjct: 74 G--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-- 129
Query: 148 VIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEAYNE 204
IHRDL N V N VK+ D GL+ ++ G ++ APE AYN+
Sbjct: 130 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL--AYNK 186
Query: 205 LV---DIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPE 254
D+++FG+ + E+ T+ P+Q+Y+ + + YR++ PE
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL------EKDYRMERPE 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 81
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 142 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 199
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELL 222
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 29/230 (12%)
Query: 25 RYNEILGKGASKTVYRA-FDEYEG--IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
R E LG G+ V R +D G + VA +K D L PE ++ E++ + +L
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLD 69
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLY 140
H+N+++ Y + VTE+ G+L KH+ + + + Q+ G+ Y
Sbjct: 70 HRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 141 LHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL------------RKSHAAHCVG 188
L S IHRDL N+ + + VKIGD GL L RK A C
Sbjct: 127 LESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC-- 181
Query: 189 TPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV 238
PE + + A D + FG+ + EM T+ + +QI K+
Sbjct: 182 APESLKTRTFSHAS----DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 88
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 89 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 148 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 257
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 258 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 89
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 150 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 207
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 208 FGATDYTSSIDVWSAGCVLAELL 230
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 27/171 (15%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINF--VTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
EI +KH+N+++F + +N + +T G+L Y LK + +
Sbjct: 59 EIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDY-LKGNIITWNELCHV 117
Query: 131 CRQILRGLLYLH---------SHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK- 180
+ RGL YLH H P + HRD K N+ + + V + D GLA
Sbjct: 118 AETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPG 176
Query: 181 -----SHAAHCVGTPEFMAPEVYEEAYN------ELVDIYSFGMCILEMVT 220
+H VGT +MAPEV E A N +D+Y+ G+ + E+V+
Sbjct: 177 KPPGDTHGQ--VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H NI+K + + D + + V E+ G L + K K + R+++ +
Sbjct: 65 HPNIVKLHEVFHDQLHTFL--VMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS-- 120
Query: 142 HSHDPPVIHRDLKCDN-IFVNGNQG-EVKIGDLGLAAILRKSHAAHCVGTPEF----MAP 195
H HD V+HRDLK +N +F + N E+KI D G A + K + TP F AP
Sbjct: 121 HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL--KPPDNQPLKTPCFTLHYAAP 178
Query: 196 EVY-EEAYNELVDIYSFGMCILEMVTFEYPYSE------CTHPAQIYKKVVSG 241
E+ + Y+E D++S G+ + M++ + P+ CT +I KK+ G
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 22/233 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
EILG G V+ A D +VA ++ D + P R E L H I+
Sbjct: 17 GEILGFGGMSEVHLARDLRLHRDVAVKVLRA-DLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 87 KFY-TSWVDTANRNINFVTEMFTSG-TLR-----QYRLKHKRVNIRAVKLWCRQILRGLL 139
Y T +T + ++ + G TLR + + KR I + C+ +
Sbjct: 76 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA-IEVIADACQALN---- 130
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS-----HAAHCVGTPEFMA 194
SH +IHRD+K NI ++ VK+ D G+A + S A +GT ++++
Sbjct: 131 --FSHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 195 PE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDS 246
PE ++ + D+YS G + E++T E P++ + + Y+ V P S
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 145/366 (39%), Gaps = 71/366 (19%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK-- 87
LG G+ V FD G A +V LQ P R E+ ++K L H NI+K
Sbjct: 15 LGTGSFGIVCEVFDIESGKRFALKKV-----LQDPRYKNR---ELDIMKVLDHVNIIKLV 66
Query: 88 --FYTSWVD--------------------------------TANRNINFVTEMFTS---G 110
FYT+ + + N+ +N + E
Sbjct: 67 DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHK 126
Query: 111 TLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIG 170
L+ + + + + + ++ Q+ R + ++HS + HRD+K N+ VN +K+
Sbjct: 127 VLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG--ICHRDIKPQNLLVNSKDNTLKLC 184
Query: 171 DLGLAAILRKSHAAHCVGTPEFM-APEVYEEA--YNELVDIYSFGMCILEMVTFEYPYSE 227
D G A L S + F APE+ A Y +D++S G E++ + +S
Sbjct: 185 DFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSG 244
Query: 228 CTHPAQIYK--KVVSGKKPDSLYRVKDPEVRRFVEKCLATVSLRLSARELLND--PFLQI 283
T Q+ + +++ + + R+ + E T+ + R++L + P L I
Sbjct: 245 ETSIDQLVRIIQIMGTPTKEQMIRMNP----HYTEVRFPTLKAK-DWRKILPEGTPSLAI 299
Query: 284 DDCESNLRSLDYSRELDDMDPLIRQPHIDFHHIDNSFSNGCAN------GYGYDTPSEWG 337
D E LR Y +L ++P H F H+ NS+ + N G + P +
Sbjct: 300 DLLEQILR---YEPDL-RINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQLFN 355
Query: 338 YSPVEV 343
+SP E+
Sbjct: 356 FSPYEL 361
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 46 EGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKNIMKFYTSWVDTANRNINFVT 104
E + VA VK+ + +DL L E+ ++K + KHKNI+ + T + + +
Sbjct: 58 EAVTVA---VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIV 112
Query: 105 EMFTSGTLRQY----------------RLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPV 148
E + G LR+Y R+ +++ + + Q+ RG+ YL S
Sbjct: 113 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--C 170
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAAHCVGTPEFMAPE-VYEEAYN 203
IHRDL N+ V N +KI D GLA + + ++MAPE +++ Y
Sbjct: 171 IHRDLAARNVLVTENN-VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 229
Query: 204 ELVDIYSFGMCILEMVTF 221
D++SFG+ + E+ T
Sbjct: 230 HQSDVWSFGVLMWEIFTL 247
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 108/249 (43%), Gaps = 22/249 (8%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVK----LYDFLQSPEDLERLYCEIHLLKTLKHKNI 85
LG GA V+ A D+ + EV +K L D L ++ EI +L ++H NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGT-LRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+K + + V E SG L + +H R++ RQ++ + YL
Sbjct: 92 IKVLDIFENQGF--FQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK 149
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-GTPEFMAPEVY--EEA 201
D +IHRD+K +NI + +K+ D G AA L + + GT E+ APEV
Sbjct: 150 D--IIHRDIKDENIVI-AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPY 206
Query: 202 YNELVDIYSFGMCILEMVTFEYPYSE-------CTHPAQIYKKVVSGKKPDSLYRVKDPE 254
++++S G+ + +V E P+ E HP + K + L V PE
Sbjct: 207 RGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVSGLLQPV--PE 264
Query: 255 VRRFVEKCL 263
R +EK +
Sbjct: 265 RRTTLEKLV 273
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 22/233 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
EILG G V+ A D +VA ++ D + P R E L H I+
Sbjct: 17 GEILGFGGMSEVHLARDLRLHRDVAVKVLRA-DLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 87 KFY-TSWVDTANRNINFVTEMFTSG-TLR-----QYRLKHKRVNIRAVKLWCRQILRGLL 139
Y T +T + ++ + G TLR + + KR I + C+ +
Sbjct: 76 AVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA-IEVIADACQALN---- 130
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS-----HAAHCVGTPEFMA 194
SH +IHRD+K NI ++ VK+ D G+A + S A +GT ++++
Sbjct: 131 --FSHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 195 PE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDS 246
PE ++ + D+YS G + E++T E P++ + + Y+ V P S
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 46 EGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKNIMKFYTSWVDTANRNINFVT 104
E + VA VK+ + +DL L E+ ++K + KHKNI+ + T + + +
Sbjct: 55 EAVTVA---VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIV 109
Query: 105 EMFTSGTLRQY----------------RLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPV 148
E + G LR+Y R+ +++ + + Q+ RG+ YL S
Sbjct: 110 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--C 167
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAAHCVGTPEFMAPE-VYEEAYN 203
IHRDL N+ V N +KI D GLA + + ++MAPE +++ Y
Sbjct: 168 IHRDLAARNVLVTENN-VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 226
Query: 204 ELVDIYSFGMCILEMVTF 221
D++SFG+ + E+ T
Sbjct: 227 HQSDVWSFGVLMWEIFTL 244
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 77
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 138 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 195
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELL 218
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 80
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 141 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 198
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELL 221
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 61
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 62 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 121 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 230
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 231 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 76
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELL 217
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 76
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELL 217
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNI 85
+ E LG GA V A ++ G A + +E EI +L+ +KH+NI
Sbjct: 26 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIEN---EIAVLRKIKHENI 82
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHD 145
+ + + ++ V ++ + G L ++ + RQ+L + YLH
Sbjct: 83 VALED--IYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMG 140
Query: 146 PPVIHRDLKCDNI--FVNGNQGEVKIGDLGLAAILRKSHA-AHCVGTPEFMAPEVY-EEA 201
++HRDLK +N+ + + ++ I D GL+ + K + GTP ++APEV ++
Sbjct: 141 --IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 202 YNELVDIYSFGMCILEMVTFEYP 224
Y++ VD +S G+ I ++ YP
Sbjct: 199 YSKAVDCWSIGV-IAYILLCGYP 220
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAA 184
VK + ++ L +LHS +I+RDLK +NI ++ +G +K+ D GL+ +I + A
Sbjct: 128 VKFYLAELALALDHLHSLG--IIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAY 184
Query: 185 HCVGTPEFMAPEVY-EEAYNELVDIYSFGMCILEMVTFEYPY 225
GT E+MAPEV + + D +SFG+ + EM+T P+
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 50 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 108
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 109 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 167
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 168 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 225
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 226 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 277
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 278 RVSX-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 311
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + E VK+ + +DL L E+ ++K + KHKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQY----------------RLKHKRVNIRAVK 128
I+ + T + + + + G LR+Y R+ +++ + +
Sbjct: 103 IINLLGAC--TQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAA 184
Q+ RG+ YL S IHRDL N+ V N +KI D GLA +
Sbjct: 161 SCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYYKKTT 217
Query: 185 HCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA--AILRKSHAA 184
VK + ++ L +LHS +I+RDLK +NI ++ +G +K+ D GL+ +I + A
Sbjct: 129 VKFYLAELALALDHLHSLG--IIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAY 185
Query: 185 HCVGTPEFMAPEVY-EEAYNELVDIYSFGMCILEMVTFEYPY 225
GT E+MAPEV + + D +SFG+ + EM+T P+
Sbjct: 186 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+++G G+ V++A E EVA +V LQ R E+ +++ +KH N++
Sbjct: 46 KVIGNGSFGVVFQA-KLVESDEVAIKKV-----LQDKRFKNR---ELQIMRIVKHPNVVD 96
Query: 88 FYTSWVDTANRN----INFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLLY 140
+ ++ +N V E R Y + + + +KL+ Q+LR L Y
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 141 LHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA-AHCVGTPEFMAPEVYE 199
+HS + HRD+K N+ ++ G +K+ D G A IL + + + APE+
Sbjct: 157 IHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIF 214
Query: 200 EA--YNELVDIYSFGMCILEMV 219
A Y +DI+S G + E++
Sbjct: 215 GATNYTTNIDIWSTGCVMAELM 236
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 16/276 (5%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLER--LYCEIHLLKTLKHKN 84
E LG G V + ++ G+E A +K S + R + E+ +L+ + H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 85 IMKFYTSWVDTANR-NINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
++ + + NR ++ + E+ + G L + + + ++ + +QIL G+ YLH+
Sbjct: 77 VITLHDVY---ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 144 HDPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AILRKSHAAHCVGTPEFMAPEVYE 199
+ H DLK +NI + N +K+ D GLA I + GTPEF+APE+
Sbjct: 134 KK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 200 -EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV-VSGKKPDSLYRVKDPEVRR 257
E D++S G+ +++ P+ T + VS + + +
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 258 FVEKCLAT-VSLRLSARELLNDPFLQ-IDDCESNLR 291
F+ K L RL+ +E L P++ +D+ ++ +R
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR 287
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQGKAFKNR---ELQIMRKLDHCNIV 76
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNR---ELQIMRKLDHCNIV 76
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELL 217
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
+++G G+ VY+A G VA +V LQ R E+ +++ L H NI+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQGKAFKNR---ELQIMRKLDHCNIV 76
Query: 87 K----FYTSWVDTANRNINFVTEMFTSGTLR---QYRLKHKRVNIRAVKLWCRQILRGLL 139
+ FY+S +N V + R Y + + + VKL+ Q+ R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-ILRKSHAAHCVGTPEFMAPEVY 198
Y+HS + HRD+K N+ ++ + +K+ D G A ++R + + + APE+
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 199 EEA--YNELVDIYSFGMCILEMV 219
A Y +D++S G + E++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 46 EGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKNIMKFYTSWVDTANRNINFVT 104
E + VA VK+ + +DL L E+ ++K + KHKNI+ + T + + +
Sbjct: 53 EAVTVA---VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIV 107
Query: 105 EMFTSGTLRQY----------------RLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPV 148
E + G LR+Y R+ +++ + + Q+ RG+ YL S
Sbjct: 108 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--C 165
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAAHCVGTPEFMAPE-VYEEAYN 203
IHRDL N+ V N +KI D GLA + + ++MAPE +++ Y
Sbjct: 166 IHRDLTARNVLVTENN-VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 224
Query: 204 ELVDIYSFGMCILEMVTF 221
D++SFG+ + E+ T
Sbjct: 225 HQSDVWSFGVLMWEIFTL 242
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 120/275 (43%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 76
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 77 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 136 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 245
Query: 249 RVKDPEVRRFVEKCLATVSL-RLSARELLNDPFLQ 282
RV E + + CLA R + E+ N P++Q
Sbjct: 246 RVSX-ECQHLIRWCLALRPXDRPTFEEIQNHPWMQ 279
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 25 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 83
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 84 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 142
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 143 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 200
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 252
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 253 RVSX-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 286
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWC 131
E ++ L H+ +++ Y V T R I +TE +G L Y R R + + C
Sbjct: 69 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 132 RQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP- 190
+ + + YL S +HRDL N VN +QG VK+ D GL+ + VG+
Sbjct: 127 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEETSSVGSKF 183
Query: 191 --EFMAPEVYEEA-YNELVDIYSFGMCILEMVTF-EYPYSECTH 230
+ PEV + ++ DI++FG+ + E+ + + PY T+
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 227
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 59
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 60 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 118
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 119 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 176
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 228
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 229 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 20/192 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E +L+KTL+H +++ Y V T I +TE G+L + + + KL +
Sbjct: 57 EANLMKTLQHDKLVRLYA--VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF 114
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + IHRDL+ N+ V+ + KI D GLA ++ + G
Sbjct: 115 SAQIAEGMAYIERKN--YIHRDLRAANVLVSESL-MCKIADFGLARVIEDNEYTAREGAK 171
Query: 191 ---EFMAPEVYEEA-YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK-- 243
++ APE + +++SFG+ + E+VT+ + PY T+ A + + G +
Sbjct: 172 FPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTN-ADVMSALSQGYRMP 230
Query: 244 -----PDSLYRV 250
PD LY +
Sbjct: 231 RMENCPDELYDI 242
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 103
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 104 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 163 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 220
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I + V ++
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ----- 272
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 273 RVSX-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 116/262 (44%), Gaps = 21/262 (8%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYCEIHLLKTLK--HK 83
+LG G +VY + + VA V ++ D+ + P R+ E+ LLK +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 69
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
+++ W + + + + L + + + + + Q+L + H
Sbjct: 70 GVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HC 126
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEV--YEEA 201
H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT + PE Y
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 202 YNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEK 261
+ ++S G+ + +MV + P+ H +I + V ++ S E + +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQRVSX------ECQHLIRW 237
Query: 262 CLAT-VSLRLSARELLNDPFLQ 282
CLA S R + E+ N P++Q
Sbjct: 238 CLALRPSDRPTFEEIQNHPWMQ 259
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + E VK+ + +DL L E+ ++K + KHKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQY----------------RLKHKRVNIRAVK 128
I+ + T + + + + G LR+Y R+ +++ + +
Sbjct: 103 IINLLGAC--TQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAA 184
Q+ RG+ YL S IHRDL N+ V N +KI D GLA +
Sbjct: 161 SCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYYKKTT 217
Query: 185 HCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 89
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 90 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 149 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I V ++
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIGGQVFFRQ----- 258
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 259 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 117/262 (44%), Gaps = 21/262 (8%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYCEIHLLKTLK--HK 83
+LG G +VY + + VA V ++ D+ + P R+ E+ LLK +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 69
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
+++ W + + + + L + + + + + Q+L + H
Sbjct: 70 GVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HC 126
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEV--YEEA 201
H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT + PE Y
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 202 YNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEK 261
+ ++S G+ + +MV + P+ H +I + V ++ RV E + +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ-----RVSS-ECQHLIRW 237
Query: 262 CLAT-VSLRLSARELLNDPFLQ 282
CLA S R + E+ N P++Q
Sbjct: 238 CLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 31 GKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYT 90
G+G TV ++ G+ VA +V +Q P R + L L H NI++ +
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKV-----IQDPRFRNRELQIMQDLAVLHHPNIVQLQS 86
Query: 91 SWVDTANRN-----INFVTEMFTSGTL----RQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
+ R+ +N V E + TL R Y + +K++ Q++R + L
Sbjct: 87 YFYTLGERDRRDIYLNVVME-YVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCL 145
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA-AHCVGTPEFMAPEVY-- 198
H V HRD+K N+ VN G +K+ D G A L S + + + APE+
Sbjct: 146 HLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFG 205
Query: 199 EEAYNELVDIYSFGMCILEMVTFE 222
+ Y VDI+S G EM+ E
Sbjct: 206 NQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWC 131
E ++ L H+ +++ Y V T R I +TE +G L Y R R + + C
Sbjct: 69 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 132 RQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP- 190
+ + + YL S +HRDL N VN +QG VK+ D GL+ + VG+
Sbjct: 127 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 183
Query: 191 --EFMAPEVYEEA-YNELVDIYSFGMCILEMVTF-EYPYSECTH 230
+ PEV + ++ DI++FG+ + E+ + + PY T+
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 227
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 88
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 89 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 148 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I V ++
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIGGQVFFRQ----- 257
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 258 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 89
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 90 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 149 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I V ++
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIGGQVFFRQ----- 258
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 259 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 88
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 89 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 148 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I V ++
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIGGQVFFRQ----- 257
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 258 RVSS-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 16/275 (5%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLER--LYCEIHLLKTLKHKNI 85
E LG G V + ++ G+E A +K S + R + E+ +L+ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 86 MKFYTSWVDTANR-NINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+ + + NR ++ + E+ + G L + + + ++ + +QIL G+ YLH+
Sbjct: 78 ITLHDVY---ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT- 133
Query: 145 DPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AILRKSHAAHCVGTPEFMAPEVYE- 199
+ H DLK +NI + N +K+ D GLA I + GTPEF+APE+
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV-VSGKKPDSLYRVKDPEVRRF 258
E D++S G+ +++ P+ T + VS + + + F
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDF 252
Query: 259 VEKCLAT-VSLRLSARELLNDPFLQ-IDDCESNLR 291
+ K L RL+ +E L P++ +D+ ++ +R
Sbjct: 253 IRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR 287
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 126/276 (45%), Gaps = 18/276 (6%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLER--LYCEIHLLKTLKHKNI 85
E LG G V + ++ G+E A +K S + R + E+ +L+ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 86 MKFYTSWVDTANR-NINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+ + + NR ++ + E+ + G L + + + ++ + +QIL G+ YLH+
Sbjct: 78 ITLHDVY---ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT- 133
Query: 145 DPPVIHRDLKCDNIFV---NGNQGEVKIGDLGLA-AILRKSHAAHCVGTPEFMAPEV--Y 198
+ H DLK +NI + N +K+ D GLA I + GTPEF+APE+ Y
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKV-VSGKKPDSLYRVKDPEVRR 257
E E D++S G+ +++ P+ T + VS + + +
Sbjct: 193 EPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 258 FVEKCLAT-VSLRLSARELLNDPFLQ-IDDCESNLR 291
F+ K L RL+ +E L P++ +D+ ++ +R
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR 287
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 22/233 (9%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIM 86
EILG G V+ A D +VA ++ D + P R E L H I+
Sbjct: 34 GEILGFGGMSEVHLARDLRLHRDVAVKVLRA-DLARDPSFYLRFRREAQNAAALNHPAIV 92
Query: 87 KFY-TSWVDTANRNINFVTEMFTSG-TLR-----QYRLKHKRVNIRAVKLWCRQILRGLL 139
Y T +T + ++ + G TLR + + KR I + C+ +
Sbjct: 93 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA-IEVIADACQALN---- 147
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS-----HAAHCVGTPEFMA 194
SH +IHRD+K NI ++ VK+ D G+A + S A +GT ++++
Sbjct: 148 --FSHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 204
Query: 195 PE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDS 246
PE ++ + D+YS G + E++T E P++ + + Y+ V P S
Sbjct: 205 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 257
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
Query: 67 LERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRA 126
+E E +++KTL+H ++K + I +TE G+L + +
Sbjct: 221 VEAFLAEANVMKTLQHDKLVKLHAV---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 277
Query: 127 VKL--WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
KL + QI G+ ++ + IHRDL+ NI V+ + KI D GLA + K
Sbjct: 278 PKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASL-VCKIADFGLARVGAKFPI- 333
Query: 185 HCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGK 242
++ APE ++ D++SFG+ ++E+VT+ PY ++P ++ + + G
Sbjct: 334 ------KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-EVIRALERG- 385
Query: 243 KPDSLYRVKDPE 254
YR+ PE
Sbjct: 386 -----YRMPRPE 392
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 50/222 (22%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKT--LKHKNI 85
E +GKG V+R + G VA VK++ S D + + E + T L+H NI
Sbjct: 14 ECVGKGRYGEVWRGL--WHGESVA---VKIF----SSRDEQSWFRETEIYNTVLLRHDNI 64
Query: 86 MKFYTSWVDTANRN----INFVTEMFTSGTL-----RQYRLKHKRVNIRAVKLWCRQILR 136
+ F S D +RN + +T G+L RQ H + + AV C
Sbjct: 65 LGFIAS--DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRL-AVSAAC----- 116
Query: 137 GLLYLHSH------DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC---- 186
GL +LH P + HRD K N+ V N + I DLGL A++ + +
Sbjct: 117 GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNL-QCCIADLGL-AVMHSQGSDYLDIGN 174
Query: 187 ---VGTPEFMAPEVYEEAYN-------ELVDIYSFGMCILEM 218
VGT +MAPEV +E + DI++FG+ + E+
Sbjct: 175 NPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 89
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 90 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 149 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I V ++
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIGGQVFFRQ----- 258
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 259 RVSX-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 89
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 90 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 149 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I V ++
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIGGQVFFRQ----- 258
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 259 RVSX-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 12/144 (8%)
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEV--YE 199
H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT + PE Y
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 200 EAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFV 259
+ ++S G+ + +MV + P+ H +I + V ++ RV E + +
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQ-----RVSS-ECQHLI 282
Query: 260 EKCLAT-VSLRLSARELLNDPFLQ 282
CLA S R + E+ N P++Q
Sbjct: 283 RWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 107/229 (46%), Gaps = 16/229 (6%)
Query: 28 EILGKGASKTVY--RAFDEYE-GIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKN 84
++LG GA V+ R ++ G A +K +Q + E E +L+ ++
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSH 144
+ T + ++ + + G L + + +R V+++ +I+ L +LH
Sbjct: 120 FLVTLHYAFQTETK-LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHK- 177
Query: 145 DPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL---RKSHAAHCVGTPEFMAPEVY--- 198
+I+RD+K +NI ++ N G V + D GL+ A GT E+MAP++
Sbjct: 178 -LGIIYRDIKLENILLDSN-GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG 235
Query: 199 EEAYNELVDIYSFGMCILEMVTFEYPYS---ECTHPAQIYKKVVSGKKP 244
+ +++ VD +S G+ + E++T P++ E A+I ++++ + P
Sbjct: 236 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP 284
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
E LG G V+ + Y G +V + Q + E +L+K L+H+ +++
Sbjct: 15 ERLGAGQFGEVWMGY--YNG----HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 68
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
Y I +TE +G+L + + + KL QI G+ ++ +
Sbjct: 69 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 125
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP---EFMAPEVYEEA- 201
IHR+L+ NI V+ + KI D GLA ++ + G ++ APE
Sbjct: 126 --YIHRNLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 182
Query: 202 YNELVDIYSFGMCILEMVTF-EYPYSECTHPAQI------YKKVVSGKKPDSLYRV 250
+ D++SFG+ + E+VT PY T+P I Y+ V P+ LY++
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 238
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 131/301 (43%), Gaps = 40/301 (13%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + V VK+ + +DL L E+ ++K + KHKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-----------------VNIRAV 127
I+ + T + + + E + G LR+Y L+ +R ++ + +
Sbjct: 96 IINLLGAC--TQDGPLYVIVEYASKGNLREY-LQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 128 KLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV 187
Q+ RG+ YL S IHRDL N+ V + +KI D GLA + H +
Sbjct: 153 VSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIH--HIDYYK 207
Query: 188 GTP------EFMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVS 240
T ++MAPE +++ Y D++SFG+ + E+ T +++K +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
Query: 241 GKKPDSLYRVKDPEVRRFVEKCLATV-SLRLSARELLNDPFLQIDDCESNLRSLDYSREL 299
G + D + E+ + C V S R + ++L+ D +I SN LD S L
Sbjct: 268 GHRMDKPSNCTN-ELYMMMRDCWHAVPSQRPTFKQLVED-LDRIVALTSNQEYLDLSMPL 325
Query: 300 D 300
D
Sbjct: 326 D 326
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 21/275 (7%)
Query: 16 EVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYC 72
E +P + +LG G +VY + + VA V ++ D+ + P R+
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 88
Query: 73 EIHLLKTLK--HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLW 130
E+ LLK + +++ W + + + + L + + + + +
Sbjct: 89 EVVLLKKVSSGFSGVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
Q+L + H H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT
Sbjct: 148 FWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 191 EFMAPEV--YEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLY 248
+ PE Y + ++S G+ + +MV + P+ H +I V ++
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIGGQVFFRQ----- 257
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
RV E + + CLA S R + E+ N P++Q
Sbjct: 258 RVSX-ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWC 131
E ++ L H+ +++ Y V T R I +TE +G L Y R R + + C
Sbjct: 53 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 110
Query: 132 RQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP- 190
+ + + YL S +HRDL N VN +QG VK+ D GL+ + VG+
Sbjct: 111 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 167
Query: 191 --EFMAPEVYEEA-YNELVDIYSFGMCILEMVTF-EYPYSECTH 230
+ PEV + ++ DI++FG+ + E+ + + PY T+
Sbjct: 168 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 211
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWC 131
E ++ L H+ +++ Y V T R I +TE +G L Y R R + + C
Sbjct: 60 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 117
Query: 132 RQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP- 190
+ + + YL S +HRDL N VN +QG VK+ D GL+ + VG+
Sbjct: 118 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 174
Query: 191 --EFMAPEVYEEA-YNELVDIYSFGMCILEMVTF-EYPYSECTH 230
+ PEV + ++ DI++FG+ + E+ + + PY T+
Sbjct: 175 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 218
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 110/271 (40%), Gaps = 56/271 (20%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSW------------------VDTANRNINFVT 104
+P+D+ER+ E+ L+K L H NI + Y + +D N I+ T
Sbjct: 68 NPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDST 127
Query: 105 -------------------EMFTSGTLRQYRLKHKRVNI-RAVKLWCRQILRGLLYLHSH 144
E +G++ +R V + + RQI L YLH+
Sbjct: 128 GKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ 187
Query: 145 DPPVIHRDLKCDNIFVNGNQG-EVKIGDLGLAAILRKSHAAHC------VGTPEFMAPEV 197
+ HRD+K +N + N+ E+K+ D GL+ K + GTP F+APEV
Sbjct: 188 G--ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEV 245
Query: 198 Y---EEAYNELVDIYSFGMCILEMVTFEYPY---SECTHPAQIYKKVVSGKKPDSLYRVK 251
E+Y D +S G+ + ++ P+ ++ +Q+ K + + P+ Y V
Sbjct: 246 LNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPN--YNVL 303
Query: 252 DPEVRRFVEKCL-ATVSLRLSARELLNDPFL 281
P R + L V R A L P++
Sbjct: 304 SPLARDLLSNLLNRNVDERFDAMRALQHPWI 334
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 18/239 (7%)
Query: 46 EGIEVAWNQV-------KLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF---YTSWVDT 95
EGI VA +V + + L +R+ EI LL H NI+ + + +
Sbjct: 45 EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEP 104
Query: 96 ANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKC 155
A + VTE+ + + + ++ + ++ + IL GL LH + V+HRDL
Sbjct: 105 AMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH--EAGVVHRDLHP 162
Query: 156 DNIFVNGNQGEVKIGDLGLA-AILRKSHAAHCVGTPEFMAPEVYEE--AYNELVDIYSFG 212
NI + N ++ I D LA ++ H V + APE+ + + +LVD++S G
Sbjct: 163 GNILLADN-NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAG 221
Query: 213 MCILEMVTFEYPYSECTHPAQIYK--KVVSGKKPDSLYRVKDPEVRRFVEKCLATVSLR 269
+ EM + + T Q+ K +VV K + + P R ++ L+ V R
Sbjct: 222 CVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPAR 280
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWC 131
E ++ L H+ +++ Y V T R I +TE +G L Y R R + + C
Sbjct: 49 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 106
Query: 132 RQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP- 190
+ + + YL S +HRDL N VN +QG VK+ D GL+ + VG+
Sbjct: 107 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 163
Query: 191 --EFMAPEVYEEA-YNELVDIYSFGMCILEMVTF-EYPYSECTH 230
+ PEV + ++ DI++FG+ + E+ + + PY T+
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 207
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 18/239 (7%)
Query: 46 EGIEVAWNQV-------KLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF---YTSWVDT 95
EGI VA +V + + L +R+ EI LL H NI+ + + +
Sbjct: 45 EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEP 104
Query: 96 ANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKC 155
A + VTE+ + + + ++ + ++ + IL GL LH + V+HRDL
Sbjct: 105 AMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH--EAGVVHRDLHP 162
Query: 156 DNIFVNGNQGEVKIGDLGLA-AILRKSHAAHCVGTPEFMAPEVYEE--AYNELVDIYSFG 212
NI + N ++ I D LA ++ H V + APE+ + + +LVD++S G
Sbjct: 163 GNILLADN-NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAG 221
Query: 213 MCILEMVTFEYPYSECTHPAQIYK--KVVSGKKPDSLYRVKDPEVRRFVEKCLATVSLR 269
+ EM + + T Q+ K +VV K + + P R ++ L+ V R
Sbjct: 222 CVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPAR 280
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 21/262 (8%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQV---KLYDFLQSPEDLERLYCEIHLLKTLK--HK 83
+LG G +VY + + VA V ++ D+ + P R+ E+ LLK +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 69
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
+++ W + + + + L + + + + + Q+L + H
Sbjct: 70 GVIRL-LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR--HC 126
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEV--YEEA 201
H+ V+HRD+K +NI ++ N+GE+K+ D G A+L+ + GT + PE Y
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 202 YNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEK 261
+ ++S G+ + +MV + P+ H +I V ++ RV E + +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIGGQVFFRQ-----RVSS-ECQHLIRW 237
Query: 262 CLAT-VSLRLSARELLNDPFLQ 282
CLA S R + E+ N P++Q
Sbjct: 238 CLALRPSDRPTFEEIQNHPWMQ 259
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG+G+ V+R D+ G + A +V+L F E+ L I+ Y
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE---------ELMACAGLTSPRIVPLY 151
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ + +N E+ G+L Q + + + Q L GL YLHS ++
Sbjct: 152 GAVRE--GPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR--IL 207
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-------GTPEFMAPE-VYEEA 201
H D+K DN+ ++ + + D G A L+ + GT MAPE V +
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 202 YNELVDIYSFGMCILEMVTFEYPYSE 227
+ VD++S +L M+ +P+++
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHPWTQ 293
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 45/277 (16%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK-HKNIMKF 88
LGKGA V+++ D G VA K++D Q+ D +R + EI +L L H+NI+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVK--KIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 89 YTSWVDTANRNINFVTEMFTS---GTLRQYRLK--HKRVNIRAVKLWCRQILRGLLYLHS 143
+R++ V + + +R L+ HK+ + Q+++ + YLHS
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVY-------QLIKVIKYLHS 127
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA----ILRKSH----------------- 182
++HRD+K NI +N + VK+ D GL+ I R ++
Sbjct: 128 GG--LLHRDMKPSNILLNA-ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 183 --AAHCVGTPEFMAPEVY--EEAYNELVDIYSFGMCILEMVTFE--YPYSECTHPAQIYK 236
V T + APE+ Y + +D++S G + E++ + +P S + +
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII 244
Query: 237 KVVSGKKPDSLYRVKDPEVRRFVEKCLATVSLRLSAR 273
V+ + + ++ P + +E V +R S +
Sbjct: 245 GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNK 281
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWC 131
E ++ L H+ +++ Y V T R I +TE +G L Y R R + + C
Sbjct: 54 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
Query: 132 RQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP- 190
+ + + YL S +HRDL N VN +QG VK+ D GL+ + VG+
Sbjct: 112 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 168
Query: 191 --EFMAPEVYEEA-YNELVDIYSFGMCILEMVTF-EYPYSECTH 230
+ PEV + ++ DI++FG+ + E+ + + PY T+
Sbjct: 169 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 212
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 110/275 (40%), Gaps = 37/275 (13%)
Query: 25 RYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK--- 81
R +LGKG TV+ + ++VA + L + + C + + K
Sbjct: 34 RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGA 93
Query: 82 ---HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGL 138
H +++ W +T + + + L Y + + + + Q++ +
Sbjct: 94 GGGHPGVIRLL-DWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 139 LYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPE-V 197
+ HS V+HRD+K +NI ++ +G K+ D G A+L GT + PE +
Sbjct: 153 QHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWI 210
Query: 198 YEEAYNEL-VDIYSFGMCILEMVTFEYPY--------SECTHPAQIYKKVVSGKKPDSLY 248
Y+ L ++S G+ + +MV + P+ +E PA +
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHV-------------- 256
Query: 249 RVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
P+ + +CLA S R S E+L DP++Q
Sbjct: 257 ---SPDCCALIRRCLAPKPSSRPSLEEILLDPWMQ 288
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 19/160 (11%)
Query: 81 KHKNIMKFYTS-WVDTA------NRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQ 133
+ ++IM F S WV ++ + V E G L + + V + K + +
Sbjct: 124 EERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNL-MSNYDVPEKWAKFYTAE 182
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC---VGTP 190
++ L +HS +IHRD+K DN+ ++ G +K+ D G + ++ HC VGTP
Sbjct: 183 VVLALDAIHSMG--LIHRDVKPDNMLLD-KHGHLKLADFGTCMKMDETGMVHCDTAVGTP 239
Query: 191 EFMAPEVYEEA-----YNELVDIYSFGMCILEMVTFEYPY 225
++++PEV + Y D +S G+ + EM+ + P+
Sbjct: 240 DYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH--KRVNIRAVKLW 130
E ++ H NI++ V T ++ + VTE +G+L + KH + I+ V +
Sbjct: 96 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM- 152
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC 186
R I G+ YL D +HRDL NI +N N K+ D GLA +L ++
Sbjct: 153 LRGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 187 VGTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK 243
P + +PE + + D++S+G+ + E++++ E PY E ++ I K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KA 262
Query: 244 PDSLYRVKDP 253
D YR+ P
Sbjct: 263 VDEGYRLPPP 272
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG+G+ V+R D+ G + A +V+L F E+ L I+ Y
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE---------ELMACAGLTSPRIVPLY 132
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ + +N E+ G+L Q + + + Q L GL YLHS ++
Sbjct: 133 GAVRE--GPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR--IL 188
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA-------HCVGTPEFMAPE-VYEEA 201
H D+K DN+ ++ + + D G A L+ + GT MAPE V +
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 202 YNELVDIYSFGMCILEMVTFEYPYSE 227
+ VD++S +L M+ +P+++
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHPWTQ 274
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH--KRVNIRAVKLW 130
E ++ H NI++ V T ++ + VTE +G+L + KH + I+ V +
Sbjct: 96 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM- 152
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC 186
R I G+ YL D +HRDL NI +N N K+ D GL+ +L ++
Sbjct: 153 LRGIASGMKYLS--DMGAVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 187 VGTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK 243
P + +PE + + D++S+G+ + E++++ E PY E ++ I K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KA 262
Query: 244 PDSLYRVKDP 253
D YR+ P
Sbjct: 263 VDEGYRLPPP 272
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLE-RLYCEIHLLKTLKHKNIMKF 88
LGKG VY A ++ VA L+ E +E +L EI + L H NI++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKV--LFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPV 148
Y + D R I + E G L + K + + ++ L+Y H V
Sbjct: 89 YNYFYD--RRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK--V 144
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYE-EAYNELVD 207
IHRD+K +N+ + G +GE+KI D G + GT +++ PE+ E +NE VD
Sbjct: 145 IHRDIKPENL-LLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVD 203
Query: 208 IYSFGMCILEMVTFEYPYSECTHPAQIYKKVV 239
++ G+ E++ P+ +H + Y+++V
Sbjct: 204 LWCIGVLCYELLVGNPPFESASH-NETYRRIV 234
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 22/159 (13%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--- 129
E ++K LKH +++ Y + I VTE G+L + K RA+KL
Sbjct: 54 EAQIMKKLKHDKLVQLYAV---VSEEPIYIVTEYMNKGSLLDFL---KDGEGRALKLPNL 107
Query: 130 --WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV 187
Q+ G+ Y+ + IHRDL+ NI V GN KI D GLA ++ +
Sbjct: 108 VDMAAQVAAGMAYIERMN--YIHRDLRSANILV-GNGLICKIADFGLARLIEDNEXTARQ 164
Query: 188 GTP---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
G ++ APE Y D++SFG+ + E+VT
Sbjct: 165 GAKFPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELVT 201
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH--KRVNIRAVKLW 130
E ++ H NI++ V T ++ + VTE +G+L + KH + I+ V +
Sbjct: 67 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM- 123
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC 186
R I G+ YL D +HRDL NI +N N K+ D GL+ +L ++
Sbjct: 124 LRGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 187 VGTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK 243
P + +PE + + D++S+G+ + E++++ E PY E ++ I K
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KA 233
Query: 244 PDSLYRVKDP 253
D YR+ P
Sbjct: 234 VDEGYRLPPP 243
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 20/189 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH-KRVNIRAVKLWC 131
E ++ H NI++ V T ++ + VTE +G+L + KH + + +
Sbjct: 96 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 132 RQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCV 187
R I G+ YL D +HRDL NI +N N K+ D GL+ +L ++
Sbjct: 154 RGIASGMKYLS--DMGFVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 188 GTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKKP 244
P + +PE + + D++S+G+ + E++++ E PY E ++ I K
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KAV 263
Query: 245 DSLYRVKDP 253
D YR+ P
Sbjct: 264 DEGYRLPPP 272
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 37/221 (16%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + V VK+ + +DL L E+ ++K + KHKN
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-----------------VNIRAV 127
I+ + T + + + E + G LR+Y L+ +R ++ + +
Sbjct: 85 IINLLGAC--TQDGPLYVIVEYASKGNLREY-LQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 128 KLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV 187
Q+ RG+ YL S IHRDL N+ V + +KI D GLA + H +
Sbjct: 142 VSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIH--HIDYYK 196
Query: 188 GTP------EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
T ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 237
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 37/221 (16%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + V VK+ + +DL L E+ ++K + KHKN
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-----------------VNIRAV 127
I+ + T + + + E + G LR+Y L+ +R ++ + +
Sbjct: 88 IINLLGAC--TQDGPLYVIVEYASKGNLREY-LQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 128 KLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV 187
Q+ RG+ YL S IHRDL N+ V + +KI D GLA + H +
Sbjct: 145 VSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIH--HIDYYK 199
Query: 188 GTP------EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
T ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 240
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH--KRVNIRAVKLW 130
E ++ H NI++ V T ++ + VTE +G+L + KH + I+ V +
Sbjct: 96 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM- 152
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC 186
R I G+ YL D +HRDL NI +N N K+ D GL+ +L ++
Sbjct: 153 LRGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 187 VGTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK 243
P + +PE + + D++S+G+ + E++++ E PY E ++ I K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KA 262
Query: 244 PDSLYRVKDP 253
D YR+ P
Sbjct: 263 VDEGYRLPPP 272
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH--KRVNIRAVKLW 130
E ++ H NI++ V T ++ + VTE +G+L + KH + I+ V +
Sbjct: 84 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM- 140
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC 186
R I G+ YL D +HRDL NI +N N K+ D GL+ +L ++
Sbjct: 141 LRGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 197
Query: 187 VGTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK 243
P + +PE + + D++S+G+ + E++++ E PY E ++ I K
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KA 250
Query: 244 PDSLYRVKDP 253
D YR+ P
Sbjct: 251 VDEGYRLPPP 260
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH--KRVNIRAVKLW 130
E ++ H NI++ V T ++ + VTE +G+L + KH + I+ V +
Sbjct: 67 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM- 123
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC 186
R I G+ YL D +HRDL NI +N N K+ D GL+ +L ++
Sbjct: 124 LRGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 187 VGTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK 243
P + +PE + + D++S+G+ + E++++ E PY E ++ I K
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KA 233
Query: 244 PDSLYRVKDP 253
D YR+ P
Sbjct: 234 VDEGYRLPPP 243
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH--KRVNIRAVKLW 130
E ++ H NI++ V T ++ + VTE +G+L + KH + I+ V +
Sbjct: 96 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM- 152
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC 186
R I G+ YL D +HRDL NI +N N K+ D GL+ +L ++
Sbjct: 153 LRGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 187 VGTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK 243
P + +PE + + D++S+G+ + E++++ E PY E ++ I K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KA 262
Query: 244 PDSLYRVKDP 253
D YR+ P
Sbjct: 263 VDEGYRLPPP 272
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH--KRVNIRAVKLW 130
E ++ H NI++ V T ++ + VTE +G+L + KH + I+ V +
Sbjct: 96 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM- 152
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC 186
R I G+ YL D +HRDL NI +N N K+ D GL+ +L ++
Sbjct: 153 LRGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 187 VGTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK 243
P + +PE + + D++S+G+ + E++++ E PY E ++ I K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KA 262
Query: 244 PDSLYRVKDP 253
D YR+ P
Sbjct: 263 VDEGYRLPPP 272
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH--KRVNIRAVKLW 130
E ++ H NI++ V T ++ + VTE +G+L + KH + I+ V +
Sbjct: 96 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM- 152
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC 186
R I G+ YL D +HRDL NI +N N K+ D GL+ +L ++
Sbjct: 153 LRGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 187 VGTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK 243
P + +PE + + D++S+G+ + E++++ E PY E ++ I K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KA 262
Query: 244 PDSLYRVKDP 253
D YR+ P
Sbjct: 263 VDEGYRLPPP 272
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 37/221 (16%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + V VK+ + +DL L E+ ++K + KHKN
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-----------------VNIRAV 127
I+ + T + + + E + G LR+Y L+ +R ++ + +
Sbjct: 89 IINLLGAC--TQDGPLYVIVEYASKGNLREY-LQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 128 KLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV 187
Q+ RG+ YL S IHRDL N+ V + +KI D GLA + H +
Sbjct: 146 VSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIH--HIDYYK 200
Query: 188 GTP------EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
T ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 241
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH--KRVNIRAVKLW 130
E ++ H NI++ V T ++ + VTE +G+L + KH + I+ V +
Sbjct: 96 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM- 152
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC 186
R I G+ YL D +HRDL NI +N N K+ D GL+ +L ++
Sbjct: 153 LRGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 187 VGTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK 243
P + +PE + + D++S+G+ + E++++ E PY E ++ I K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KA 262
Query: 244 PDSLYRVKDP 253
D YR+ P
Sbjct: 263 VDEGYRLPPP 272
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 37/221 (16%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + V VK+ + +DL L E+ ++K + KHKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-----------------VNIRAV 127
I+ + T + + + E + G LR+Y L+ +R ++ + +
Sbjct: 96 IINLLGAC--TQDGPLYVIVEYASKGNLREY-LQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 128 KLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV 187
Q+ RG+ YL S IHRDL N+ V + +KI D GLA + H +
Sbjct: 153 VSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIH--HIDYYK 207
Query: 188 GTP------EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
T ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK------------ 180
QI + +LHS ++HRDLK NIF + VK+GD GL + +
Sbjct: 172 QIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 181 SHAAHC--VGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKK 237
++A H VGT +M+PE ++ Y+ VDI+S G+ + E++ Y +S +I
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---YSFSTQMERVRIITD 285
Query: 238 VVSGKKPDSLYRVKDPEVRRFVEKCLA 264
V + K P L+ K P+ V+ L+
Sbjct: 286 VRNLKFP-LLFTQKYPQEHMMVQDMLS 311
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G+G V+ A ++ + A +++L + + E + R E+ L L+H I++++
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMR---EVKALAKLEHPGIVRYF 70
Query: 90 TSWVDT 95
+W++T
Sbjct: 71 NAWLET 76
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 37/221 (16%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + V VK+ + +DL L E+ ++K + KHKN
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-----------------VNIRAV 127
I+ + T + + + E + G LR+Y L+ +R ++ + +
Sbjct: 81 IINLLGAC--TQDGPLYVIVEYASKGNLREY-LQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 128 KLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV 187
Q+ RG+ YL S IHRDL N+ V + +KI D GLA + H +
Sbjct: 138 VSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIH--HIDYYK 192
Query: 188 GTP------EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
T ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 233
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 129/293 (44%), Gaps = 54/293 (18%)
Query: 3 GLTHLEPDCSEFVEVDPTGRYGRYNEILGK----GASKTVYRAFDEYEGIEVAWN--QVK 56
G L D + +E DP + R N +LGK G V +A + + VK
Sbjct: 1 GPLSLSVDAFKILE-DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVK 59
Query: 57 LYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYR 116
+ SP +L L E ++LK + H +++K Y + + + + + E G+LR +
Sbjct: 60 MLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGA--CSQDGPLLLIVEYAKYGSLRGFL 117
Query: 117 LKHKRVNI-------------------RAVKL-----WCRQILRGLLYLHSHDPPVIHRD 152
+ ++V RA+ + + QI +G+ YL ++HRD
Sbjct: 118 RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS--LVHRD 175
Query: 153 LKCDNIFVNGNQGEVKIGDLGLA-------AILRKSHAAHCVGTPEFMAPE-VYEEAYNE 204
L NI V + ++KI D GL+ + +++S V ++MA E +++ Y
Sbjct: 176 LAARNILVAEGR-KMKISDFGLSRDVYEEDSXVKRSQGRIPV---KWMAIESLFDHIYTT 231
Query: 205 LVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSG---KKPDS----LYRV 250
D++SFG+ + E+VT P +++ + +G ++PD+ +YR+
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRL 284
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH--KRVNIRAVKLW 130
E ++ H NI++ V T ++ + VTE +G+L + KH + I+ V +
Sbjct: 94 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM- 150
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC 186
R I G+ YL D +HRDL NI +N N K+ D GL+ +L ++
Sbjct: 151 LRGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 207
Query: 187 VGTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK 243
P + +PE + + D++S+G+ + E++++ E PY E ++ I K
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KA 260
Query: 244 PDSLYRVKDP 253
D YR+ P
Sbjct: 261 VDEGYRLPPP 270
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH--KRVNIRAVKLW 130
E ++ H NI++ V T ++ + VTE +G+L + KH + I+ V +
Sbjct: 96 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM- 152
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC 186
R I G+ YL D +HRDL NI +N N K+ D GL +L ++
Sbjct: 153 LRGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 187 VGTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK 243
P + +PE + + D++S+G+ + E++++ E PY E ++ I K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------KA 262
Query: 244 PDSLYRVKDP 253
D YR+ P
Sbjct: 263 VDEGYRLPPP 272
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 28/236 (11%)
Query: 5 THLEPDCSEFVEVDPTGRYGRYNEILGKGAS--KTVYRAFDEYEGIEVAWNQVKLYDFLQ 62
T + P C +V G +G + + K +S K V A + ++ + + + DFL
Sbjct: 39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAI---KTLKAGYTEKQRVDFL- 94
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKR 121
E ++ H NI++ V + + + +TE +G L ++ R K
Sbjct: 95 ---------GEAGIMGQFSHHNIIRL--EGVISKYKPMMIITEYMENGALDKFLREKDGE 143
Query: 122 VNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS 181
++ + R I G+ YL + + +HRDL NI VN N K+ D GL+ +L
Sbjct: 144 FSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAARNILVNSNL-VCKVSDFGLSRVLEDD 200
Query: 182 HAAHCVGTP-----EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTH 230
A + + APE + + D++SFG+ + E++T+ E PY E ++
Sbjct: 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN 256
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 130/293 (44%), Gaps = 54/293 (18%)
Query: 3 GLTHLEPDCSEFVEVDPTGRYGRYNEILGK----GASKTVYRAFDEYEGIEVAWN--QVK 56
G L D + +E DP + R N +LGK G V +A + + VK
Sbjct: 1 GPLSLSVDAFKILE-DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVK 59
Query: 57 LYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYR 116
+ SP +L L E ++LK + H +++K Y + + + + + E G+LR +
Sbjct: 60 MLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGA--CSQDGPLLLIVEYAKYGSLRGFL 117
Query: 117 LKHKRV-------------------NIRAVKL-----WCRQILRGLLYLHSHDPPVIHRD 152
+ ++V + RA+ + + QI +G+ YL ++HRD
Sbjct: 118 RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRD 175
Query: 153 LKCDNIFVNGNQGEVKIGDLGLA-------AILRKSHAAHCVGTPEFMAPE-VYEEAYNE 204
L NI V + ++KI D GL+ + +++S V ++MA E +++ Y
Sbjct: 176 LAARNILVAEGR-KMKISDFGLSRDVYEEDSXVKRSQGRIPV---KWMAIESLFDHIYTT 231
Query: 205 LVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSG---KKPDS----LYRV 250
D++SFG+ + E+VT P +++ + +G ++PD+ +YR+
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRL 284
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 37/221 (16%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + V VK+ + +DL L E+ ++K + KHKN
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKR-----------------VNIRAV 127
I+ + T + + + E + G LR+Y L+ +R ++ + +
Sbjct: 137 IINLLGAC--TQDGPLYVIVEYASKGNLREY-LQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 128 KLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV 187
Q+ RG+ YL S IHRDL N+ V + +KI D GLA + H +
Sbjct: 194 VSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIH--HIDYYK 248
Query: 188 GTP------EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
T ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 289
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 129/293 (44%), Gaps = 54/293 (18%)
Query: 3 GLTHLEPDCSEFVEVDPTGRYGRYNEILGK----GASKTVYRAFDEYEGIEVAWN--QVK 56
G L D + +E DP + R N +LGK G V +A + + VK
Sbjct: 1 GPLSLSVDAFKILE-DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVK 59
Query: 57 LYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYR 116
+ SP +L L E ++LK + H +++K Y + + + + + E G+LR +
Sbjct: 60 MLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGA--CSQDGPLLLIVEYAKYGSLRGFL 117
Query: 117 LKHKRVNI-------------------RAVKL-----WCRQILRGLLYLHSHDPPVIHRD 152
+ ++V RA+ + + QI +G+ YL ++HRD
Sbjct: 118 RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRD 175
Query: 153 LKCDNIFVNGNQGEVKIGDLGLA-------AILRKSHAAHCVGTPEFMAPE-VYEEAYNE 204
L NI V + ++KI D GL+ + +++S V ++MA E +++ Y
Sbjct: 176 LAARNILVAEGR-KMKISDFGLSRDVYEEDSYVKRSQGRIPV---KWMAIESLFDHIYTT 231
Query: 205 LVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSG---KKPDS----LYRV 250
D++SFG+ + E+VT P +++ + +G ++PD+ +YR+
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRL 284
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++ L H +++ Y ++ A I VTE G L Y L+ +R A L
Sbjct: 53 EAEVMMKLSHPKLVQLYGVCLEQAP--ICLVTEFMEHGCLSDY-LRTQRGLFAAETLLGM 109
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
C + G+ YL + VIHRDL N V NQ +K+ D G+ + GT
Sbjct: 110 CLDVCEGMAYLE--EACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTK 166
Query: 191 ---EFMAPEVYEEA-YNELVDIYSFGMCILEMVT 220
++ +PEV+ + Y+ D++SFG+ + E+ +
Sbjct: 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 30 LGKGASKTVYRA----FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKN 84
LG+GA V A D+ + V VK+ + +DL L E+ ++K + KHKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 85 IMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK----------------RVNIRAVK 128
I+ + T + + + E + G LR+Y + +++ + +
Sbjct: 96 IINLLGAC--TQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVG 188
Q+ RG+ YL S IHRDL N+ V + +KI D GLA + H +
Sbjct: 154 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIH--HIDYYKK 208
Query: 189 TP------EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
T ++MAPE +++ Y D++SFG+ + E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 75 HLLKTLKHKNIMKFYTSWVDTANRN---INFVTEMFTSGTLRQYRLKHKRVNIRAVKLWC 131
L + H +I++ + ++V+ +R+ + ++ + G + R K +++ + +
Sbjct: 131 QFLAEVVHPSIVQIF-NFVEHTDRHGDPVGYIVMEYVGGQSLK-RSKGQKLPVAEAIAYL 188
Query: 132 RQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPE 191
+IL L YLHS +++ DLK +NI + Q +K+ DLG A+ R + + GTP
Sbjct: 189 LEILPALSYLHSIG--LVYNDLKPENIMLTEEQ--LKLIDLG--AVSRINSFGYLYGTPG 242
Query: 192 FMAPEVYEEAYNELVDIYSFGMCILEMVTFEYP 224
F APE+ DIY+ G L +T + P
Sbjct: 243 FQAPEIVRTGPTVATDIYTVGRT-LAALTLDLP 274
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 25/192 (13%)
Query: 48 IEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMF 107
++V + + + DFL CE ++ H N++ + V T + + V E
Sbjct: 79 LKVGYTEKQRRDFL----------CEASIMGQFDHPNVV--HLEGVVTRGKPVMIVIEFM 126
Query: 108 TSGTLRQYRLKH--KRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQG 165
+G L + KH + I+ V + R I G+ YL D +HRDL NI VN N
Sbjct: 127 ENGALDAFLRKHDGQFTVIQLVGM-LRGIAAGMRYLA--DMGYVHRDLAARNILVNSNL- 182
Query: 166 EVKIGDLGLAAILRKSHAAHCVGTP-----EFMAPEVYE-EAYNELVDIYSFGMCILEMV 219
K+ D GL+ ++ A T + APE + + D++S+G+ + E++
Sbjct: 183 VCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242
Query: 220 TF-EYPYSECTH 230
++ E PY + ++
Sbjct: 243 SYGERPYWDMSN 254
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++ H NI+ + V T ++ + VTE +G+L + LK ++L
Sbjct: 73 EASIMGQFDHPNII--HLEGVVTKSKPVMIVTEYMENGSLDTF-LKKNDGQFTVIQLVGM 129
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHC 186
R I G+ YL D +HRDL NI +N N K+ D GL+ +L ++
Sbjct: 130 LRGISAGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 186
Query: 187 VGTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK 243
P + APE + + D++S+G+ + E+V++ E PY E T+ + K V G +
Sbjct: 187 GKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTN-QDVIKAVEEGYR 245
Query: 244 -------PDSLYRV 250
P +LY++
Sbjct: 246 LPSPMDCPAALYQL 259
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 14/108 (12%)
Query: 124 IRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNG--NQGEVKIGDLGLAAILRKS 181
IR +K QIL G+ YLH ++ ++H DLK NI ++ G++KI D G++ +
Sbjct: 134 IRLIK----QILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIG 185
Query: 182 HAAH---CVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPY 225
HA +GTPE++APE+ + D+++ G+ ++T P+
Sbjct: 186 HACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 116/282 (41%), Gaps = 35/282 (12%)
Query: 23 YGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
Y + E++G G V R + G + + +K + E ++ +H
Sbjct: 17 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEH 76
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWCRQILRGLLYL 141
NI++ V T + + +TE +G L + RL + + + R I G+ YL
Sbjct: 77 PNIIRLEG--VVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 134
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA----AHCVGTP---EFMA 194
+HRDL NI VN N K+ D GL+ L ++ + +G + A
Sbjct: 135 AEMS--YVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 195 PEVYE-EAYNELVDIYSFGMCILEMVTF-EYPYSECTH-------------------PAQ 233
PE + D +S+G+ + E+++F E PY + ++ P
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTS 251
Query: 234 IYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT-VSLRLSARE 274
+++ ++ + D R + P+V ++K + SL++ ARE
Sbjct: 252 LHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKIVARE 293
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLE----RLYCEIHLLKTLK 81
+ ++LG GA V A D+ VA + + E LE + EI +L +K
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCI-------AKEALEGKEGSMENEIAVLHKIK 74
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H NI+ + + ++ + ++ + G L ++ R Q+L + YL
Sbjct: 75 HPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 142 HSHDPPVIHRDLKCDNIFVNG--NQGEVKIGDLGLAAILR-KSHAAHCVGTPEFMAPEVY 198
H D ++HRDLK +N+ ++ I D GL+ + S + GTP ++APEV
Sbjct: 133 H--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 199 -EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
++ Y++ VD +S G+ I ++ YP + A+++++++ +
Sbjct: 191 AQKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 81 KHKNIMKFYTS-WVDTA------NRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQ 133
+ ++IM F S WV +R + V E G L + + V + + + +
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL-MSNYDVPEKWARFYTAE 181
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC---VGTP 190
++ L +HS IHRD+K DN+ ++ G +K+ D G + K C VGTP
Sbjct: 182 VVLALDAIHSMG--FIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 238
Query: 191 EFMAPEVYEEA-----YNELVDIYSFGMCILEMVTFEYPY 225
++++PEV + Y D +S G+ + EM+ + P+
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 81 KHKNIMKFYTS-WVDTA------NRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQ 133
+ ++IM F S WV +R + V E G L + + V + + + +
Sbjct: 118 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL-MSNYDVPEKWARFYTAE 176
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC---VGTP 190
++ L +HS IHRD+K DN+ ++ G +K+ D G + K C VGTP
Sbjct: 177 VVLALDAIHSMG--FIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 233
Query: 191 EFMAPEVYEEA-----YNELVDIYSFGMCILEMVTFEYPY 225
++++PEV + Y D +S G+ + EM+ + P+
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 68 ERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAV 127
E E ++K L+H+ +++ Y + I VTE + G+L + +R
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 363
Query: 128 KL--WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH 185
+L QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ +
Sbjct: 364 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 420
Query: 186 CVGTP---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
G ++ APE Y D++SFG+ + E+ T
Sbjct: 421 RQGAKFPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 459
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 37/283 (13%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQV----KLYDFLQSPEDLERLYCEIHLLKTLKH 82
+ ++GKG VY E I+ A N++ K + + +E E L++ L H
Sbjct: 26 DRVIGKGHFGVVYHG----EYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNH 81
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLH 142
N++ + + M L+ R + ++ + + Q+ RG+ YL
Sbjct: 82 PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA 141
Query: 143 SHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA---------AILRKSHAAHCVGTPEFM 193
+HRDL N ++ VK+ D GLA ++ + HA V
Sbjct: 142 EQK--FVHRDLAARNCMLD-ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 194 APEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKK-------PDS 246
+ + Y + D++SFG+ + E++T P P + + G++ PDS
Sbjct: 199 SLQTYR--FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDS 256
Query: 247 LYRV------KDPEVRRFVEKCLATVSLRLSARELLNDPFLQI 283
LY+V DP VR + V +SA LL D ++Q+
Sbjct: 257 LYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA--LLGDHYVQL 297
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 12/221 (5%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNI 85
+ ++LG GA V A D+ VA + +E EI +L +KH NI
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMEN---EIAVLHKIKHPNI 78
Query: 86 MKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHD 145
+ + + ++ + ++ + G L ++ R Q+L + YLH D
Sbjct: 79 VALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH--D 134
Query: 146 PPVIHRDLKCDNIFVNG--NQGEVKIGDLGLAAILR-KSHAAHCVGTPEFMAPEVY-EEA 201
++HRDLK +N+ ++ I D GL+ + S + GTP ++APEV ++
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 202 YNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
Y++ VD +S G+ I ++ YP + A+++++++ +
Sbjct: 195 YSKAVDCWSIGV-IAYILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 105/267 (39%), Gaps = 42/267 (15%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
LG+G+ V+R D+ G + A +V+L F E+ L I+ Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE---------ELVACAGLSSPRIVPLY 130
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ + +N E+ G+L Q + + + Q L GL YLH+ ++
Sbjct: 131 GAVRE--GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR--IL 186
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-------GTPEFMAPE-VYEEA 201
H D+K DN+ ++ + + D G A L+ + GT MAPE V +
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 202 YNELVDIYSFGMCILEMVTFEYPYSE------CTHPAQ---------------IYKKVVS 240
+ VDI+S +L M+ +P+++ C A + +
Sbjct: 247 CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQE 306
Query: 241 GKKPDSLYRVKDPEVRRFVEKCLATVS 267
G + + ++R E+RR V K L V
Sbjct: 307 GLRKEPVHRASAMELRRKVGKALQEVG 333
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 81 KHKNIMKFYTS-WVDTA------NRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQ 133
+ ++IM F S WV +R + V E G L + + V + + + +
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL-MSNYDVPEKWARFYTAE 181
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC---VGTP 190
++ L +HS IHRD+K DN+ ++ G +K+ D G + K C VGTP
Sbjct: 182 VVLALDAIHSM--GFIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 238
Query: 191 EFMAPEVYEEA-----YNELVDIYSFGMCILEMVTFEYPY 225
++++PEV + Y D +S G+ + EM+ + P+
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 25 RYNEILGKGASKTVYRA--FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
R ++LG G TV++ E E I++ +K+ + + + + + + +L H
Sbjct: 34 RKLKVLGSGVFGTVHKGVWIPEGESIKIP-VCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 92
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYL 141
+I++ ++ VT+ G+L + +H+ + + + W QI +G+ YL
Sbjct: 93 AHIVRLLGL---CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL 149
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILR---KSHAAHCVGTP-EFMAPE- 196
H ++HR+L N+ + + +V++ D G+A +L K TP ++MA E
Sbjct: 150 EEHG--MVHRNLAARNVLLK-SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF-EYPYS 226
++ Y D++S+G+ + E++TF PY+
Sbjct: 207 IHFGKYTHQSDVWSYGVTVWELMTFGAEPYA 237
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 25 RYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPED--LERLYC-EIHLLKT 79
+Y +I +G+G+ V++ + G VA + FL+S +D ++++ EI +LK
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKK-----FLESEDDPVIKKIALREIRMLKQ 58
Query: 80 LKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLL 139
LKH N++ V R ++ V E L + + V VK Q L+ +
Sbjct: 59 LKHPNLVNLLE--VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVN 116
Query: 140 YLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILR--KSHAAHCVGTPEFMAPE- 196
+ H H+ IHRD+K +NI + +K+ D G A +L + V T + +PE
Sbjct: 117 FCHKHN--CIHRDVKPENILIT-KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPEL 173
Query: 197 -VYEEAYNELVDIYSFGMCILEMVT 220
V + Y VD+++ G E+++
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++ L H +++ Y ++ A I V E G L Y L+ +R A L
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGCLSDY-LRTQRGLFAAETLLGM 108
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
C + G+ YL + VIHRDL N V NQ +K+ D G+ + GT
Sbjct: 109 CLDVCEGMAYLE--EASVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTK 165
Query: 191 ---EFMAPEVYEEA-YNELVDIYSFGMCILEMVT 220
++ +PEV+ + Y+ D++SFG+ + E+ +
Sbjct: 166 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 117/282 (41%), Gaps = 35/282 (12%)
Query: 23 YGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
Y + E++G G V R + G + + +K + E ++ +H
Sbjct: 15 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEH 74
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWCRQILRGLLYL 141
NI++ V T + + +TE +G L + RL + + + R I G+ YL
Sbjct: 75 PNIIRLEG--VVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 132
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA----AHCVGTP---EFMA 194
+HRDL NI VN N K+ D GL+ L ++ + +G + A
Sbjct: 133 AEMS--YVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 195 PE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTH-------------------PAQ 233
PE + + D +S+G+ + E+++F E PY + ++ P
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTS 249
Query: 234 IYKKVVSGKKPDSLYRVKDPEVRRFVEKCLAT-VSLRLSARE 274
+++ ++ + D R + P+V ++K + SL++ ARE
Sbjct: 250 LHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKIVARE 291
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLE----RLYCEIHLLKTLK 81
+ ++LG GA V A D+ VA + + E LE + EI +L +K
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCI-------AKEALEGKEGSMENEIAVLHKIK 74
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H NI+ + + ++ + ++ + G L ++ R Q+L + YL
Sbjct: 75 HPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 142 HSHDPPVIHRDLKCDNIFVNG--NQGEVKIGDLGLAAILR-KSHAAHCVGTPEFMAPEVY 198
H D ++HRDLK +N+ ++ I D GL+ + S + GTP ++APEV
Sbjct: 133 H--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 199 -EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
++ Y++ VD +S G+ I ++ YP + A+++++++ +
Sbjct: 191 AQKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 13/110 (11%)
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS---HAAHCVGTPEFMAPEVYEE 200
H +HRD+K DNI ++ N G +++ D G L + ++ VGTP++++PE+ +
Sbjct: 192 HQLHYVHRDIKPDNILMDMN-GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 201 A------YNELVDIYSFGMCILEMVTFEYP-YSECTHPAQIYKKVVSGKK 243
Y D +S G+C+ EM+ E P Y+E + Y K+++ K+
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL--VETYGKIMNHKE 298
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 25 RYNEILGKGASKTVYRA--FDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH 82
R ++LG G TV++ E E I++ +K+ + + + + + + +L H
Sbjct: 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIP-VCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 83 KNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHK-RVNIRAVKLWCRQILRGLLYL 141
+I++ ++ VT+ G+L + +H+ + + + W QI +G+ YL
Sbjct: 75 AHIVRLLGL---CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL 131
Query: 142 HSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILR---KSHAAHCVGTP-EFMAPE- 196
H ++HR+L N+ + + +V++ D G+A +L K TP ++MA E
Sbjct: 132 EEHG--MVHRNLAARNVLLK-SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 197 VYEEAYNELVDIYSFGMCILEMVTF-EYPYS 226
++ Y D++S+G+ + E++TF PY+
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMTFGAEPYA 219
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++K L+H+ +++ Y + I VTE + G+L + +R +L
Sbjct: 53 EAQVMKKLRHEKLVQLYAV---VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 109
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ + G
Sbjct: 110 AAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEXTARQGAK 166
Query: 191 ---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
++ APE Y D++SFG+ + E+ T
Sbjct: 167 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 200
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
RAV + +I GL LH +++RDLK +NI ++ + G ++I DLGLA + +
Sbjct: 287 RAV-FYAAEICCGLEDLHRER--IVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTI 342
Query: 185 HC-VGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSE 227
VGT +MAPEV + E Y D ++ G + EM+ + P+ +
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
Query: 26 YNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLE----RLYCEIHLLKTLK 81
+ ++LG GA V A D+ VA + + E LE + EI +L +K
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCI-------AKEALEGKEGSMENEIAVLHKIK 74
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYL 141
H NI+ + + ++ + ++ + G L ++ R Q+L + YL
Sbjct: 75 HPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 142 HSHDPPVIHRDLKCDNIFVNG--NQGEVKIGDLGLAAILR-KSHAAHCVGTPEFMAPEVY 198
H D ++HRDLK +N+ ++ I D GL+ + S + GTP ++APEV
Sbjct: 133 H--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 199 -EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGK 242
++ Y++ VD +S G+ I ++ YP + A+++++++ +
Sbjct: 191 AQKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 105/267 (39%), Gaps = 42/267 (15%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G+G+ V+R D+ G + A +V+L F E+ L I+ Y
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE---------ELVACAGLSSPRIVPLY 116
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ + +N E+ G+L Q + + + Q L GL YLH+ ++
Sbjct: 117 GAVRE--GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR--IL 172
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-------GTPEFMAPE-VYEEA 201
H D+K DN+ ++ + + D G A L+ + GT MAPE V +
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 202 YNELVDIYSFGMCILEMVTFEYPYSE------CTHPAQ---------------IYKKVVS 240
+ VDI+S +L M+ +P+++ C A + +
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQE 292
Query: 241 GKKPDSLYRVKDPEVRRFVEKCLATVS 267
G + + ++R E+RR V K L V
Sbjct: 293 GLRKEPVHRASAMELRRKVGKALQEVG 319
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 125 RAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA 184
RAV + +I GL LH +++RDLK +NI ++ + G ++I DLGLA + +
Sbjct: 287 RAV-FYAAEICCGLEDLHRER--IVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTI 342
Query: 185 HC-VGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSE 227
VGT +MAPEV + E Y D ++ G + EM+ + P+ +
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAAHCVGTPEF 192
G+ +LH + IHRD+K NI ++ KI D GLA K + VGT +
Sbjct: 145 GINFLHENHH--IHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAY 201
Query: 193 MAPEVYEEAYNELVDIYSFGMCILEMVT 220
MAPE DIYSFG+ +LE++T
Sbjct: 202 MAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++ L H +++ Y ++ A I V E G L Y L+ +R A L
Sbjct: 55 EAEVMMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGCLSDY-LRTQRGLFAAETLLGM 111
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
C + G+ YL + VIHRDL N V NQ +K+ D G+ + GT
Sbjct: 112 CLDVCEGMAYLE--EACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTK 168
Query: 191 ---EFMAPEVYEEA-YNELVDIYSFGMCILEMVT 220
++ +PEV+ + Y+ D++SFG+ + E+ +
Sbjct: 169 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++ L H +++ Y ++ A I V E G L Y L+ +R A L
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGCLSDY-LRTQRGLFAAETLLGM 108
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
C + G+ YL + VIHRDL N V NQ +K+ D G+ + GT
Sbjct: 109 CLDVCEGMAYLE--EACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTK 165
Query: 191 ---EFMAPEVYEEA-YNELVDIYSFGMCILEMVT 220
++ +PEV+ + Y+ D++SFG+ + E+ +
Sbjct: 166 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++ L H +++ Y ++ A I V E G L Y L+ +R A L
Sbjct: 50 EAEVMMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGCLSDY-LRTQRGLFAAETLLGM 106
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
C + G+ YL + VIHRDL N V NQ +K+ D G+ + GT
Sbjct: 107 CLDVCEGMAYLE--EACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTK 163
Query: 191 ---EFMAPEVYEEA-YNELVDIYSFGMCILEMVT 220
++ +PEV+ + Y+ D++SFG+ + E+ +
Sbjct: 164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 68 ERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAV 127
E E ++K L+H+ +++ Y + I VTE + G+L + +R
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 280
Query: 128 KL--WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH 185
+L QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ +
Sbjct: 281 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 337
Query: 186 CVGTP---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
G ++ APE Y D++SFG+ + E+ T
Sbjct: 338 RQGAKFPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++K L+H+ +++ Y + I VTE + G+L + +R +L
Sbjct: 229 EAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ + G
Sbjct: 286 AAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAK 342
Query: 191 ---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
++ APE Y D++SFG+ + E+ T
Sbjct: 343 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 376
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 105/267 (39%), Gaps = 42/267 (15%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFY 89
+G+G+ V+R D+ G + A +V+L F E+ L I+ Y
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE---------ELVACAGLSSPRIVPLY 132
Query: 90 TSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVI 149
+ + +N E+ G+L Q + + + Q L GL YLH+ ++
Sbjct: 133 GAVRE--GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR--IL 188
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCV-------GTPEFMAPE-VYEEA 201
H D+K DN+ ++ + + D G A L+ + GT MAPE V +
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 248
Query: 202 YNELVDIYSFGMCILEMVTFEYPYSE------CTHPAQ---------------IYKKVVS 240
+ VDI+S +L M+ +P+++ C A + +
Sbjct: 249 CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQE 308
Query: 241 GKKPDSLYRVKDPEVRRFVEKCLATVS 267
G + + ++R E+RR V K L V
Sbjct: 309 GLRKEPVHRASAMELRRKVGKALQEVG 335
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++ L H +++ Y ++ A I V E G L Y L+ +R A L
Sbjct: 72 EAEVMMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGCLSDY-LRTQRGLFAAETLLGM 128
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
C + G+ YL + VIHRDL N V NQ +K+ D G+ + GT
Sbjct: 129 CLDVCEGMAYLE--EACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTK 185
Query: 191 ---EFMAPEVYEEA-YNELVDIYSFGMCILEMVT 220
++ +PEV+ + Y+ D++SFG+ + E+ +
Sbjct: 186 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAAHCVGTPEF 192
G+ +LH + IHRD+K NI ++ KI D GLA K VGT +
Sbjct: 145 GINFLHENHH--IHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAY 201
Query: 193 MAPEVYEEAYNELVDIYSFGMCILEMVT 220
MAPE DIYSFG+ +LE++T
Sbjct: 202 MAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++K L+H+ +++ Y + I VTE + G+L + +R +L
Sbjct: 56 EAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 112
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ + G
Sbjct: 113 AAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAK 169
Query: 191 ---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
++ APE Y D++SFG+ + E+ T
Sbjct: 170 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 203
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAAHCVGTPEF 192
G+ +LH + IHRD+K NI ++ KI D GLA K VGT +
Sbjct: 139 GINFLHENHH--IHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAY 195
Query: 193 MAPEVYEEAYNELVDIYSFGMCILEMVT 220
MAPE DIYSFG+ +LE++T
Sbjct: 196 MAPEALRGEITPKSDIYSFGVVLLEIIT 223
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++K L+H+ +++ Y + I VTE + G+L + +R +L
Sbjct: 54 EAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 110
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ + G
Sbjct: 111 AAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAK 167
Query: 191 ---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
++ APE Y D++SFG+ + E+ T
Sbjct: 168 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++K L+H+ +++ Y + I VTE + G+L + +R +L
Sbjct: 52 EAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 108
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ + G
Sbjct: 109 AAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAK 165
Query: 191 ---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
++ APE Y D++SFG+ + E+ T
Sbjct: 166 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 199
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 45/296 (15%)
Query: 23 YGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLE-RLYCEIHLLKTLK 81
Y ++LG+GA V + E A VK+ + + P + R++ E+ +L +
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYA---VKIIE--KQPGHIRSRVFREVEMLYQCQ 68
Query: 82 -HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLY 140
H+N+++ V E G++ + K + N + + + L +
Sbjct: 69 GHRNVLELIEF--FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDF 126
Query: 141 LHSHDPPVIHRDLKCDNIFV-NGNQ-GEVKIGDLGLAAILRKSHAAHCVGTP-------- 190
LH+ + HRDLK +NI + NQ VKI D GL + ++ + + TP
Sbjct: 127 LHNKG--IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 191 -EFMAPEVYE------EAYNELVDIYSFGMCILEMVTFEYPY-----SEC------THPA 232
E+MAPEV E Y++ D++S G+ + +++ P+ S+C PA
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244
Query: 233 ---QIYKKVVSGKK--PDSLYRVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
+++ + GK PD + + + K L RLSA ++L P++Q
Sbjct: 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 24/201 (11%)
Query: 100 INFVTEMFTSGTLRQYRLKH-KRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNI 158
+ V E + G L K +R+ + + +I+ + +H +HRD+K DNI
Sbjct: 136 LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG--YVHRDIKPDNI 193
Query: 159 FVNGNQGEVKIGDLGLAAILRKSHAAH---CVGTPEFMAPEVYEEAYNELV--------D 207
++ G +++ D G LR VGTP++++PE+ + D
Sbjct: 194 LLD-RCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECD 252
Query: 208 IYSFGMCILEMVTFEYP-YSECTHPAQIYKKVVSGKKPDSLYRVKD---PEVRRFVEKCL 263
++ G+ EM + P Y++ T A+ Y K+V K+ SL V + E R F+++ L
Sbjct: 253 WWALGVFAYEMFYGQTPFYADST--AETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLL 310
Query: 264 ATVSLRL---SARELLNDPFL 281
RL A + PF
Sbjct: 311 CPPETRLGRGGAGDFRTHPFF 331
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++K L+H+ +++ Y + I VTE + G+L + +R +L
Sbjct: 63 EAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ + G
Sbjct: 120 AAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 191 ---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
++ APE Y D++SFG+ + E+ T
Sbjct: 177 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++K L+H+ +++ Y + I VTE G+L + +R +L
Sbjct: 60 EAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM 116
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ + G
Sbjct: 117 SAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEWTARQGAK 173
Query: 191 ---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
++ APE Y D++SFG+ + E+ T
Sbjct: 174 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++K L+H+ +++ Y + I VTE G+L + +R +L
Sbjct: 60 EAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM 116
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ + G
Sbjct: 117 SAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAK 173
Query: 191 ---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
++ APE Y D++SFG+ + E+ T
Sbjct: 174 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 207
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 68 ERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAV 127
E E ++K L+H+ +++ Y + I VTE + G+L + +R
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 281
Query: 128 KL--WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH 185
+L QI G+ Y+ + +HRDL+ NI V G K+ D GL ++ +
Sbjct: 282 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLGRLIEDNEYTA 338
Query: 186 CVGTP---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
G ++ APE Y D++SFG+ + E+ T
Sbjct: 339 RQGAKFPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 377
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 103/244 (42%), Gaps = 65/244 (26%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL--KTLK---- 81
+ILG G+S TV ++G VA ++ L DF C+I L+ K L
Sbjct: 21 KILGYGSSGTVVFQ-GSFQGRPVAVKRM-LIDF-----------CDIALMEIKLLTESDD 67
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--------WCRQ 133
H N++++Y S +T +R + E+ Q ++ K V+ +KL RQ
Sbjct: 68 HPNVIRYYCS--ETTDRFLYIALELCNLNL--QDLVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVN------------GNQGEVKIGDLGLAAILRKS 181
I G+ +LHS +IHRDLK NI V+ + I D GL L
Sbjct: 124 IASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 182 HAAHCV------GTPEFMAPEVYEEAYN--------ELVDIYSFGMCILEMVTFEYPYSE 227
++ GT + APE+ EE+ N +DI+S G C+ F Y S+
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG-CV-----FYYILSK 235
Query: 228 CTHP 231
HP
Sbjct: 236 GKHP 239
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++K ++H+ +++ Y + I VTE + G+L + +R +L
Sbjct: 63 EAQVMKKIRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ + G
Sbjct: 120 AAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 191 ---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
++ APE Y D++SFG+ + E+ T
Sbjct: 177 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++K L+H+ +++ Y + I VTE + G L + +R +L
Sbjct: 63 EAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM 119
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ + G
Sbjct: 120 AAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 191 ---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
++ APE Y D++SFG+ + E+ T
Sbjct: 177 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 128/280 (45%), Gaps = 24/280 (8%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSP-EDLERLYCEIHLLKTLKHKNIMKF 88
LG+G V+R +E + + + F++ D + EI +L +H+NI+
Sbjct: 13 LGRGEFGIVHRC------VETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHL 66
Query: 89 YTSWVDTANRNINFVTEMFTSG--TLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
+ S+ + F F SG + +N R + + Q+ L +LHSH+
Sbjct: 67 HESFESMEELVMIF---EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN- 122
Query: 147 PVIHRDLKCDNIFVNGNQGE-VKIGDLGLAAILRKSHAAHCVGT-PEFMAPEVYE-EAYN 203
+ H D++ +NI + +KI + G A L+ + T PE+ APEV++ + +
Sbjct: 123 -IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVS 181
Query: 204 ELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKP--DSLYRVKDPEVRRFVEK 261
D++S G + +++ P+ T+ QI + +++ + + ++ E FV++
Sbjct: 182 TATDMWSLGTLVYVLLSGINPFLAETNQ-QIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240
Query: 262 CLAT-VSLRLSARELLNDPFL--QIDDCESN-LRSLDYSR 297
L R++A E L P+L +I+ + +R+L + R
Sbjct: 241 LLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRR 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS---HAAHCVGTPEFMAPEVYEE 200
H +HRD+K DN+ ++ N G +++ D G + ++ VGTP++++PE+ +
Sbjct: 208 HQLHYVHRDIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 201 A------YNELVDIYSFGMCILEMVTFEYPY 225
Y D +S G+C+ EM+ E P+
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKS---HAAHCVGTPEFMAPEVYEE 200
H +HRD+K DN+ ++ N G +++ D G + ++ VGTP++++PE+ +
Sbjct: 192 HQLHYVHRDIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 201 A------YNELVDIYSFGMCILEMVTFEYPY 225
Y D +S G+C+ EM+ E P+
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++K L+H+ +++ Y + I V E + G+L + +R +L
Sbjct: 63 EAQVMKKLRHEKLVQLYAV---VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ + G
Sbjct: 120 AAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEXTARQGAK 176
Query: 191 ---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
++ APE Y D++SFG+ + E+ T
Sbjct: 177 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 137 GLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRK----SHAAHCVGTPEF 192
G+ +LH + IHRD+K NI ++ KI D GLA K + VGT +
Sbjct: 136 GINFLHENHH--IHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAY 192
Query: 193 MAPEVYEEAYNELVDIYSFGMCILEMVT 220
APE DIYSFG+ +LE++T
Sbjct: 193 XAPEALRGEITPKSDIYSFGVVLLEIIT 220
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWC 131
E ++ H NI+ + V T + + +TE +G+L + R R + +
Sbjct: 80 EASIMGQFDHPNII--HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 137
Query: 132 RQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCV 187
R I G+ YL D +HRDL NI VN N K+ D G++ +L ++
Sbjct: 138 RGIGSGMKYLS--DMSAVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGG 194
Query: 188 GTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTH 230
P + APE + + D++S+G+ + E++++ E PY + ++
Sbjct: 195 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 240
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 68 ERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAV 127
E E ++K L+H+ +++ Y + I V E + G+L + +R
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLP 280
Query: 128 KL--WCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAH 185
+L QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ +
Sbjct: 281 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 337
Query: 186 CVGTP---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
G ++ APE Y D++SFG+ + E+ T
Sbjct: 338 RQGAKFPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 376
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 18 DPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHL 76
D +Y + +I G+G V++A G +VA +V + + + P R EI +
Sbjct: 15 DEVSKYEKLAKI-GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKI 70
Query: 77 LKTLKHKNIMKFYTSWVDTA---NRNINFVTEMF------TSGTLRQYRLKHKRVNIRAV 127
L+ LKH+N++ A NR + +F +G L +K I+ V
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 128 KLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL------RKS 181
+ +L GL Y+H + ++HRD+K N+ + + G +K+ D GLA + +
Sbjct: 131 ---MQMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPN 184
Query: 182 HAAHCVGTPEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ V T + PE+ E Y +D++ G + EM T
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 103/240 (42%), Gaps = 61/240 (25%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL--KTLK---- 81
+ILG G+S TV ++G VA ++ L DF C+I L+ K L
Sbjct: 39 KILGYGSSGTVVFQ-GSFQGRPVAVKRM-LIDF-----------CDIALMEIKLLTESDD 85
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--------WCRQ 133
H N++++Y S +T +R + E+ Q ++ K V+ +KL RQ
Sbjct: 86 HPNVIRYYCS--ETTDRFLYIALELCNLNL--QDLVESKNVSDENLKLQKEYNPISLLRQ 141
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVN------------GNQGEVKIGDLGLAAILR-- 179
I G+ +LHS +IHRDLK NI V+ + I D GL L
Sbjct: 142 IASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 180 ----KSHAAHCVGTPEFMAPEVYEEA----YNELVDIYSFGMCILEMVTFEYPYSECTHP 231
+ + + GT + APE+ EE+ +DI+S G C+ F Y S+ HP
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG-CV-----FYYILSKGKHP 253
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 103/240 (42%), Gaps = 61/240 (25%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL--KTLK---- 81
+ILG G+S TV ++G VA ++ L DF C+I L+ K L
Sbjct: 39 KILGYGSSGTVVFQ-GSFQGRPVAVKRM-LIDF-----------CDIALMEIKLLTESDD 85
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--------WCRQ 133
H N++++Y S +T +R + E+ Q ++ K V+ +KL RQ
Sbjct: 86 HPNVIRYYCS--ETTDRFLYIALELCNLNL--QDLVESKNVSDENLKLQKEYNPISLLRQ 141
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVN------------GNQGEVKIGDLGLAAILR-- 179
I G+ +LHS +IHRDLK NI V+ + I D GL L
Sbjct: 142 IASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 180 ----KSHAAHCVGTPEFMAPEVYEEA----YNELVDIYSFGMCILEMVTFEYPYSECTHP 231
+ + + GT + APE+ EE+ +DI+S G C+ F Y S+ HP
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG-CV-----FYYILSKGKHP 253
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 104/244 (42%), Gaps = 65/244 (26%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLL--KTLK---- 81
+ILG G+S TV ++G VA ++ L DF C+I L+ K L
Sbjct: 21 KILGYGSSGTVVFQ-GSFQGRPVAVKRM-LIDF-----------CDIALMEIKLLTESDD 67
Query: 82 HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--------WCRQ 133
H N++++Y S +T +R + E+ Q ++ K V+ +KL RQ
Sbjct: 68 HPNVIRYYCS--ETTDRFLYIALELCNLNL--QDLVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVN------------GNQGEVKIGDLGLAAILR-- 179
I G+ +LHS +IHRDLK NI V+ + I D GL L
Sbjct: 124 IASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 180 ----KSHAAHCVGTPEFMAPEVYEEAYN--------ELVDIYSFGMCILEMVTFEYPYSE 227
+ + + GT + APE+ EE+ N +DI+S G C+ F Y S+
Sbjct: 182 QXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG-CV-----FYYILSK 235
Query: 228 CTHP 231
HP
Sbjct: 236 GKHP 239
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++K L+H+ +++ Y + I V E + G+L + +R +L
Sbjct: 63 EAQVMKKLRHEKLVQLYAV---VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ + G
Sbjct: 120 AAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 191 ---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
++ APE Y D++SFG+ + E+ T
Sbjct: 177 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 18 DPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHL 76
D +Y + +I G+G V++A G +VA +V + + + P R EI +
Sbjct: 15 DEVSKYEKLAKI-GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKI 70
Query: 77 LKTLKHKNIMKFYTSWVDTA---NRNINFVTEMF------TSGTLRQYRLKHKRVNIRAV 127
L+ LKH+N++ A NR + +F +G L +K I+ V
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 128 KLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL------RKS 181
+ +L GL Y+H + ++HRD+K N+ + + G +K+ D GLA + +
Sbjct: 131 ---MQMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPN 184
Query: 182 HAAHCVGTPEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ V T + PE+ E Y +D++ G + EM T
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++K L+H+ +++ Y + I V E + G+L + +R +L
Sbjct: 63 EAQVMKKLRHEKLVQLYAV---VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ + G
Sbjct: 120 AAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 191 ---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
++ APE Y D++SFG+ + E+ T
Sbjct: 177 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 18 DPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHL 76
D +Y + +I G+G V++A G +VA +V + + + P R EI +
Sbjct: 14 DEVSKYEKLAKI-GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKI 69
Query: 77 LKTLKHKNIMKFYTSWVDTA---NRNINFVTEMF------TSGTLRQYRLKHKRVNIRAV 127
L+ LKH+N++ A NR + +F +G L +K I+ V
Sbjct: 70 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 129
Query: 128 KLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL------RKS 181
+ +L GL Y+H + ++HRD+K N+ + + G +K+ D GLA + +
Sbjct: 130 ---MQMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPN 183
Query: 182 HAAHCVGTPEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ V T + PE+ E Y +D++ G + EM T
Sbjct: 184 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 39/217 (17%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKNIM 86
E +G G +V++ +G A + K L D + E++ L +H +++
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVLGQHSHVV 74
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTL-----RQYRLK--HKRVNIRAVKLWCRQILRGLL 139
+++++W + + I E G+L YR+ K ++ + L Q+ RGL
Sbjct: 75 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKDLLL---QVGRGLR 129
Query: 140 YLHSHDPPVIHRDLKCDNIFVN------------------GNQGEVKIGDLGLAAILRKS 181
Y+HS ++H D+K NIF++ N+ KIGDLG + R S
Sbjct: 130 YIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG--HVTRIS 185
Query: 182 HAAHCVGTPEFMAPEVYEEAYNEL--VDIYSFGMCIL 216
G F+A EV +E Y L DI++ + ++
Sbjct: 186 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 222
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 39/217 (17%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKNIM 86
E +G G +V++ +G A + K L D + E++ L +H +++
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTL-----RQYRLK--HKRVNIRAVKLWCRQILRGLL 139
+++++W + + I E G+L YR+ K ++ + L Q+ RGL
Sbjct: 73 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKDLLL---QVGRGLR 127
Query: 140 YLHSHDPPVIHRDLKCDNIFVN------------------GNQGEVKIGDLGLAAILRKS 181
Y+HS ++H D+K NIF++ N+ KIGDLG + R S
Sbjct: 128 YIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG--HVTRIS 183
Query: 182 HAAHCVGTPEFMAPEVYEEAYNEL--VDIYSFGMCIL 216
G F+A EV +E Y L DI++ + ++
Sbjct: 184 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 39/217 (17%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKNIM 86
E +G G +V++ +G A + K L D + E++ L +H +++
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTL-----RQYRLK--HKRVNIRAVKLWCRQILRGLL 139
+++++W + + I E G+L YR+ K ++ + L Q+ RGL
Sbjct: 73 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKDLLL---QVGRGLR 127
Query: 140 YLHSHDPPVIHRDLKCDNIFVN------------------GNQGEVKIGDLGLAAILRKS 181
Y+HS ++H D+K NIF++ N+ KIGDLG + R S
Sbjct: 128 YIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG--HVTRIS 183
Query: 182 HAAHCVGTPEFMAPEVYEEAYNEL--VDIYSFGMCIL 216
G F+A EV +E Y L DI++ + ++
Sbjct: 184 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWC 131
E ++ H NI+ + V T + + +TE +G+L + R R + +
Sbjct: 65 EASIMGQFDHPNII--HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 122
Query: 132 RQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCV 187
R I G+ YL D +HRDL NI VN N K+ D G++ +L ++
Sbjct: 123 RGIGSGMKYLS--DMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGG 179
Query: 188 GTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTH 230
P + APE + + D++S+G+ + E++++ E PY + ++
Sbjct: 180 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 225
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVKLWC 131
E ++ H NI+ + V T + + +TE +G+L + R R + +
Sbjct: 59 EASIMGQFDHPNII--HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 116
Query: 132 RQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL----RKSHAAHCV 187
R I G+ YL D +HRDL NI VN N K+ D G++ +L ++
Sbjct: 117 RGIGSGMKYLS--DMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGG 173
Query: 188 GTP-EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTH 230
P + APE + + D++S+G+ + E++++ E PY + ++
Sbjct: 174 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 219
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 42/228 (18%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF 88
++G G+ V A+D+ E VA K+ + D +R+ EI +L L H +++K
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIK--KILRVFEDLIDCKRILREIAILNRLNHDHVVKV 117
Query: 89 YTSWVDTANRNIN---FVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHD 145
+ + V E+ S + +R + +K +L G+ Y+HS
Sbjct: 118 LDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELH-IKTLLYNLLVGVKYVHSAG 176
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAI---------------------------- 177
++HRDLK N VN + VK+ D GLA
Sbjct: 177 --ILHRDLKPANCLVNQD-CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHT 233
Query: 178 --LRKSHAAHCVGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMVTF 221
L++ H V T + APE + +E Y E +D++S G E++
Sbjct: 234 KNLKRQLTGHVV-TRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 18 DPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQS-PEDLERLYCEIHL 76
D +Y + +I G+G V++A G +VA +V + + + P R EI +
Sbjct: 15 DEVSKYEKLAKI-GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKI 70
Query: 77 LKTLKHKNIMKFYTSWVDTA---NRNINFVTEMF------TSGTLRQYRLKHKRVNIRAV 127
L+ LKH+N++ A NR + +F +G L +K I+ V
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 128 KLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIL------RKS 181
+ +L GL Y+H + ++HRD+K N+ + + G +K+ D GLA + +
Sbjct: 131 ---MQMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPN 184
Query: 182 HAAHCVGTPEFMAPEVY--EEAYNELVDIYSFGMCILEMVT 220
+ V T + PE+ E Y +D++ G + EM T
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 39/217 (17%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTL-KHKNIM 86
E +G G +V++ +G A + K L D + E++ L +H +++
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVLGQHSHVV 70
Query: 87 KFYTSWVDTANRNINFVTEMFTSGTL-----RQYRLK--HKRVNIRAVKLWCRQILRGLL 139
+++++W + + I E G+L YR+ K ++ + L Q+ RGL
Sbjct: 71 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKDLLL---QVGRGLR 125
Query: 140 YLHSHDPPVIHRDLKCDNIFVN------------------GNQGEVKIGDLGLAAILRKS 181
Y+HS ++H D+K NIF++ N+ KIGDLG + R S
Sbjct: 126 YIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG--HVTRIS 181
Query: 182 HAAHCVGTPEFMAPEVYEEAYNEL--VDIYSFGMCIL 216
G F+A EV +E Y L DI++ + ++
Sbjct: 182 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 218
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 126/296 (42%), Gaps = 45/296 (15%)
Query: 23 YGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLE-RLYCEIHLLKTLK 81
Y ++LG+GA V + E A VK+ + + P + R++ E+ +L +
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYA---VKIIE--KQPGHIRSRVFREVEMLYQCQ 68
Query: 82 -HKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLY 140
H+N+++ V E G++ + K + N + + + L +
Sbjct: 69 GHRNVLELIEF--FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDF 126
Query: 141 LHSHDPPVIHRDLKCDNIFV-NGNQ-GEVKIGDLGLAAILRKSHAAHCVGTP-------- 190
LH+ + HRDLK +NI + NQ VKI D L + ++ + + TP
Sbjct: 127 LHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 191 -EFMAPEVYE------EAYNELVDIYSFGMCILEMVTFEYPY-----SEC------THPA 232
E+MAPEV E Y++ D++S G+ + +++ P+ S+C PA
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244
Query: 233 ---QIYKKVVSGKK--PDSLYRVKDPEVRRFVEKCLAT-VSLRLSARELLNDPFLQ 282
+++ + GK PD + + + K L RLSA ++L P++Q
Sbjct: 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 29/182 (15%)
Query: 61 LQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH- 119
L + +D +R E LL L+H++I+KFY D + V E G L ++ H
Sbjct: 58 LAARKDFQR---EAELLTNLQHEHIVKFYGVCGD--GDPLIMVFEYMKHGDLNKFLRAHG 112
Query: 120 ---------------KRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQ 164
+ + + QI G++YL S +HRDL N V N
Sbjct: 113 PDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGANL 170
Query: 165 GEVKIGDLGLAAILRKSH----AAHCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMV 219
VKIGD G++ + + H + +M PE + + D++SFG+ + E+
Sbjct: 171 -LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 229
Query: 220 TF 221
T+
Sbjct: 230 TY 231
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++K L+H+ +++ Y + I V E + G L + +R +L
Sbjct: 63 EAQVMKKLRHEKLVQLYAV---VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM 119
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP 190
QI G+ Y+ + +HRDL+ NI V G K+ D GLA ++ + G
Sbjct: 120 AAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 191 ---EFMAPEVYEEAYNELV---DIYSFGMCILEMVT 220
++ APE Y D++SFG+ + E+ T
Sbjct: 177 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++ H N++ + V T + + +TE +G+L + L+ ++L
Sbjct: 84 EASIMGQFDHPNVI--HLEGVVTKSTPVMIITEFMENGSLDSF-LRQNDGQFTVIQLVGM 140
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA----AHC 186
R I G+ YL D +HRDL NI VN N K+ D GL+ L +
Sbjct: 141 LRGIAAGMKYLA--DMNYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 187 VGTP---EFMAPEVYE-EAYNELVDIYSFGMCILEMVTF-EYPYSECTH 230
+G + APE + + D++S+G+ + E++++ E PY + T+
Sbjct: 198 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 246
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 27 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 83
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 84 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 142
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ YL S +HRDL N ++ + VK+ D GLA
Sbjct: 143 NETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 199
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 200 DMYDKEYYSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 256
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 257 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 287
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 116 RLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVN-----GNQGEVKIG 170
+ +H+ + + VK +Q+L GL Y+H +IH D+K +N+ + N ++KI
Sbjct: 122 KYEHRGIPLIYVKQISKQLLLGLDYMHRR-CGIIHTDIKPENVLMEIVDSPENLIQIKIA 180
Query: 171 DLGLAAILRKSHAAHCVGTPEFMAPEVYEEA-YNELVDIYSFGMCILEMVTFEYPY---- 225
DLG A H + + T E+ +PEV A + DI+S I E++T ++ +
Sbjct: 181 DLG-NACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 239
Query: 226 -----SECTHPAQIYKKVVSGKKPDSLYR 249
+ H AQI + + G+ P L R
Sbjct: 240 GHSYTKDDDHIAQIIE--LLGELPSYLLR 266
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 8 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 64
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 65 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 123
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ YL S +HRDL N ++ + VK+ D GLA
Sbjct: 124 NETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 180
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 181 DMYDKEXXSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 238 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 268
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 116 RLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVN-----GNQGEVKIG 170
+ +H+ + + VK +Q+L GL Y+H +IH D+K +N+ + N ++KI
Sbjct: 122 KYEHRGIPLIYVKQISKQLLLGLDYMHRR-CGIIHTDIKPENVLMEIVDSPENLIQIKIA 180
Query: 171 DLGLAAILRKSHAAHCVGTPEFMAPEVYEEA-YNELVDIYSFGMCILEMVTFEYPY---- 225
DLG A H + + T E+ +PEV A + DI+S I E++T ++ +
Sbjct: 181 DLG-NACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 239
Query: 226 -----SECTHPAQIYKKVVSGKKPDSLYR 249
+ H AQI + + G+ P L R
Sbjct: 240 GHSYTKDDDHIAQIIE--LLGELPSYLLR 266
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 30 LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKH-KNIMKF 88
LG+G V+ E I + N+ + L+ P ++ EI +L+ L+ NI+
Sbjct: 45 LGRGKYSEVF------EAINITNNEKVVVKILK-PVKKNKIKREIKILENLRGGPNIITL 97
Query: 89 YTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPV 148
D +R V E + +Q ++ + ++ + +IL+ L Y HS +
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMG--I 152
Query: 149 IHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAPE--VYEEAYNEL 205
+HRD+K N+ ++ ++++ D GLA + V + F PE V + Y+
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 206 VDIYSFGMCILEMVTFEYPY 225
+D++S G + M+ + P+
Sbjct: 213 LDMWSLGCMLASMIFRKEPF 232
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
NI+K + D ++ V E + +Q ++ + ++ + ++L+ L Y HS
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQL---YQILTDFDIRFYMYELLKALDYCHS 150
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAPE--VYEE 200
++HRD+K N+ ++ Q ++++ D GLA + + V + F PE V +
Sbjct: 151 KG--IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 208
Query: 201 AYNELVDIYSFGMCILEMVTFEYPY 225
Y+ +D++S G + M+ P+
Sbjct: 209 MYDYSLDMWSLGCMLASMIFRREPF 233
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH----- 119
+D +R E LL L+H++I++F+ V T R + V E G L ++ H
Sbjct: 88 QDFQR---EAELLTMLQHQHIVRFFG--VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAK 142
Query: 120 ----------KRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKI 169
+ + + Q+ G++YL +HRDL N V G VKI
Sbjct: 143 LLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLV-GQGLVVKI 199
Query: 170 GDLGLAAILRKSHAAHCVGTP----EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EY 223
GD G++ + + G +M PE + + D++SFG+ + E+ T+ +
Sbjct: 200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 259
Query: 224 PYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKC 262
P+ + ++ I + G++ + R PEV + C
Sbjct: 260 PWYQLSNTEAI-DCITQGRELER-PRACPPEVYAIMRGC 296
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 9 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 65
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 66 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 124
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ YL S +HRDL N ++ + VK+ D GLA
Sbjct: 125 NETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 181
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 182 DMYDKEYYSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 239 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 269
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHS 143
NI+K + D ++ V E + +Q ++ + ++ + ++L+ L Y HS
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQL---YQILTDFDIRFYMYELLKALDYCHS 155
Query: 144 HDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAPE--VYEE 200
++HRD+K N+ ++ Q ++++ D GLA + + V + F PE V +
Sbjct: 156 KG--IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 213
Query: 201 AYNELVDIYSFGMCILEMVTF 221
Y+ +D++S G C+L + F
Sbjct: 214 MYDYSLDMWSLG-CMLASMIF 233
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAI---LRKSHAAHCV 187
C RGL YLH+ +IHRD+K NI ++ N KI D G++ L ++H V
Sbjct: 145 CIGAARGLHYLHTR--AIIHRDVKSINILLDENFVP-KITDFGISKKGTELDQTHLXXVV 201
Query: 188 -GTPEFMAPEVYEEA-YNELVDIYSFGMCILEMV 219
GT ++ PE + + E D+YSFG+ + E++
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAI---LRKSHAAHCV 187
C RGL YLH+ +IHRD+K NI ++ N KI D G++ L ++H V
Sbjct: 145 CIGAARGLHYLHTR--AIIHRDVKSINILLDENFVP-KITDFGISKKGTELGQTHLXXVV 201
Query: 188 -GTPEFMAPEVYEEA-YNELVDIYSFGMCILEMV 219
GT ++ PE + + E D+YSFG+ + E++
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 28 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 84
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 85 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 143
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ YL S +HRDL N ++ + VK+ D GLA
Sbjct: 144 NETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 200
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 201 DMYDKEYYSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 257
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 258 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 288
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 1 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 57
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 58 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 116
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ YL S +HRDL N ++ + VK+ D GLA
Sbjct: 117 NETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 173
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 174 DMYDKEYYSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 230
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 231 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 261
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 7 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 63
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 64 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 122
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ YL S +HRDL N ++ + VK+ D GLA
Sbjct: 123 NETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 179
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 180 DMYDKEYYSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 237 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 267
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 68 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 124
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 125 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 183
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ +L S +HRDL N ++ + VK+ D GLA
Sbjct: 184 NETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 240
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 241 DMYDKEFDSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 297
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 298 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 328
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 6 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 62
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 63 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 121
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ YL S +HRDL N ++ + VK+ D GLA
Sbjct: 122 NETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 178
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 179 DMYDKEYYSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 235
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 236 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 266
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 8 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 64
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 65 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 123
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ YL S +HRDL N ++ + VK+ D GLA
Sbjct: 124 NETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 180
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 181 DMYDKEYYSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 238 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 268
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 9 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 65
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 66 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 124
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ YL S +HRDL N ++ + VK+ D GLA
Sbjct: 125 NETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 181
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 182 DMYDKEYYSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 239 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 269
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 85/196 (43%), Gaps = 17/196 (8%)
Query: 77 LKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI-----RAVKLWC 131
L+ H N++ + + +T G+L Y + H+ N +AVK
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSL--YNVLHEGTNFVVDQSQAVKF-A 117
Query: 132 RQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPE 191
+ RG+ +LH+ +P + L ++ ++ E + +A + + + P
Sbjct: 118 LDMARGMAFLHTLEPLIPRHALNSRSVMID----EDMTARISMADVKFSFQSPGRMYAPA 173
Query: 192 FMAPEVY----EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDSL 247
++APE E+ D++SF + + E+VT E P+++ ++ K + G +P ++
Sbjct: 174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP-TI 232
Query: 248 YRVKDPEVRRFVEKCL 263
P V + ++ C+
Sbjct: 233 PPGISPHVSKLMKICM 248
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP-- 190
Q+ RG+ +L S IHRDL NI ++ N VKI D GLA + K+ G
Sbjct: 207 QVARGMEFLSSRK--CIHRDLAARNILLSENN-VVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 191 --EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
++MAPE ++++ Y+ D++S+G+ + E+ +
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSL 297
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 4 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 60
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 61 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 119
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ YL S +HRDL N ++ + VK+ D GLA
Sbjct: 120 NETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 176
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 177 DMYDKEYYSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 233
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 234 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 264
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH----- 119
+D +R E LL L+H++I++F+ V T R + V E G L ++ H
Sbjct: 59 QDFQR---EAELLTMLQHQHIVRFFG--VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAK 113
Query: 120 ----------KRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKI 169
+ + + Q+ G++YL +HRDL N V G VKI
Sbjct: 114 LLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLV-GQGLVVKI 170
Query: 170 GDLGLAAILRKSHAAHCVGTP----EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EY 223
GD G++ + + G +M PE + + D++SFG+ + E+ T+ +
Sbjct: 171 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 230
Query: 224 PYSECTHPAQIYKKVVSGKKPDSLYRVKDPEVRRFVEKC 262
P+ + ++ I + G++ + R PEV + C
Sbjct: 231 PWYQLSNTEAI-DCITQGRELER-PRACPPEVYAIMRGC 267
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH--K 120
S E + L E+H+ K H NI+ + +++ A+ + VT G+ + H
Sbjct: 50 SNEMVTFLQGELHVSKLFNHPNIVPYRATFI--ADNELWVVTSFMAYGSAKDLICTHFMD 107
Query: 121 RVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKI----GDLGLAA 176
+N A+ + +L+ L Y+H +HR +K +I ++ + G+V + +L + +
Sbjct: 108 GMNELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVD-GKVYLSGLRSNLSMIS 164
Query: 177 ILRKSHAAH-----CVGTPEFMAPEVYE---EAYNELVDIYSFGMCILEMVTFEYPYSEC 228
++ H V +++PEV + + Y+ DIYS G+ E+ P+ +
Sbjct: 165 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 224
Query: 229 THPAQIYKKV 238
+ +K+
Sbjct: 225 PATQMLLEKL 234
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 118/268 (44%), Gaps = 28/268 (10%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 10 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 66
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 67 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 125
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA 176
+ ++ + + Q+ +G+ +L S +HRDL N ++ + VK+ D GLA
Sbjct: 126 NETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 182
Query: 177 -ILRKS----HAAHCVGTP-EFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYSECT 229
+L K H P ++MA E + + + D++SFG+ + E++T P
Sbjct: 183 DMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 242
Query: 230 HPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 243 NTFDITVYLLQGRRLLQPEYCPDPLYEV 270
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 28/177 (15%)
Query: 65 EDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH----- 119
+D +R E LL L+H++I++F+ V T R + V E G L ++ H
Sbjct: 65 QDFQR---EAELLTMLQHQHIVRFFG--VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAK 119
Query: 120 ----------KRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKI 169
+ + + Q+ G++YL +HRDL N V G VKI
Sbjct: 120 LLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLV-GQGLVVKI 176
Query: 170 GDLGLAAILRKSHAAHCVGTP----EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
GD G++ + + G +M PE + + D++SFG+ + E+ T+
Sbjct: 177 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTY 233
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 63 SPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH--K 120
S E + L E+H+ K H NI+ + +++ A+ + VT G+ + H
Sbjct: 66 SNEMVTFLQGELHVSKLFNHPNIVPYRATFI--ADNELWVVTSFMAYGSAKDLICTHFMD 123
Query: 121 RVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKI----GDLGLAA 176
+N A+ + +L+ L Y+H +HR +K +I ++ + G+V + +L + +
Sbjct: 124 GMNELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVD-GKVYLSGLRSNLSMIS 180
Query: 177 ILRKSHAAH-----CVGTPEFMAPEVYE---EAYNELVDIYSFGMCILEMVTFEYPYSEC 228
++ H V +++PEV + + Y+ DIYS G+ E+ P+ +
Sbjct: 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240
Query: 229 THPAQIYKKV 238
+ +K+
Sbjct: 241 PATQMLLEKL 250
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 14 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 70
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 71 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 129
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ +L S +HRDL N ++ + VK+ D GLA
Sbjct: 130 NETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 186
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 187 DMYDKEFDSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 243
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 244 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 274
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 9 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 65
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 66 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 124
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ +L S +HRDL N ++ + VK+ D GLA
Sbjct: 125 NETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 181
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 182 DMYDKEFDSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 239 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 269
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 9 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 65
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 66 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 124
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ +L S +HRDL N ++ + VK+ D GLA
Sbjct: 125 NETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 181
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 182 DMYDKEFDSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 239 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 269
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 10 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 66
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 67 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 125
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ +L S +HRDL N ++ + VK+ D GLA
Sbjct: 126 NETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 182
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 183 DMYDKEFDSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 240 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 270
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 4 LTHLEPDCSEFVE---VDPTGRYGRYNEILGKGASKTVYRAF---DEYEGIEVAWNQVKL 57
L+ L P+ + V+ + P+ +NE++G+G VY ++ + I A VK
Sbjct: 7 LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA---VKS 63
Query: 58 YDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQY-R 116
+ + ++ + E ++K H N++ + + + + M G LR + R
Sbjct: 64 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM-KHGDLRNFIR 122
Query: 117 LKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA- 175
+ ++ + + Q+ +G+ +L S +HRDL N ++ + VK+ D GLA
Sbjct: 123 NETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLD-EKFTVKVADFGLAR 179
Query: 176 --------AILRKSHAAHCVGTPEFMAPEVYE-EAYNELVDIYSFGMCILEMVTFEYPYS 226
++ K+ A V ++MA E + + + D++SFG+ + E++T P
Sbjct: 180 DMYDKEFDSVHNKTGAKLPV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
Query: 227 ECTHPAQIYKKVVSGKK-------PDSLYRV 250
+ I ++ G++ PD LY V
Sbjct: 237 PDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 267
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 23/167 (13%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKH------------- 119
E LL L+H++I+KFY V+ + V E G L ++ H
Sbjct: 65 EAELLTNLQHEHIVKFYGVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPP 122
Query: 120 KRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILR 179
+ + +QI G++YL S +HRDL N V G VKIGD G++ +
Sbjct: 123 TELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLV-GENLLVKIGDFGMSRDVY 179
Query: 180 KSH----AAHCVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ H + +M PE + + D++S G+ + E+ T+
Sbjct: 180 STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTY 226
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 73 EIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--W 130
E ++ H N++ + V T + + +TE +G+L + L+ ++L
Sbjct: 58 EASIMGQFDHPNVI--HLEGVVTKSTPVMIITEFMENGSLDSF-LRQNDGQFTVIQLVGM 114
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA----AHC 186
R I G+ YL D +HR L NI VN N K+ D GL+ L +
Sbjct: 115 LRGIAAGMKYLA--DMNYVHRALAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 187 VGTP---EFMAPEVYE-EAYNELVDIYSFGMCILEMVTF-EYPYSECTH 230
+G + APE + + D++S+G+ + E++++ E PY + T+
Sbjct: 172 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 220
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 35/220 (15%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF 88
++G+G+ VY A+D+ VA +V + D +R+ EI +L LK I++
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVN--RMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 89 YTSWV--DTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
Y + D + ++ L++ + +K +L G ++H +
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH--ES 148
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAI-------------------------LRKS 181
+IHRDLK N +N + VK+ D GLA L+K
Sbjct: 149 GIIHRDLKPANCLLNQD-CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ 207
Query: 182 HAAHCVGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMV 219
+H V T + APE + +E Y + +DI+S G E++
Sbjct: 208 LTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 94 DTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDL 153
D +R V E + +Q R +IR + +IL+ L Y HS ++HRD+
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLRQTLTDYDIR---FYMYEILKALDYCHSMG--IMHRDV 157
Query: 154 KCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC-VGTPEFMAPE--VYEEAYNELVDIYS 210
K N+ ++ ++++ D GLA + V + F PE V + Y+ +D++S
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 211 FGMCILEMVTFEYPY 225
G + M+ + P+
Sbjct: 218 LGCMLASMIFRKEPF 232
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ +GKG V +Y G +VA +K + + E ++ L+H N+++
Sbjct: 18 QTIGKGEFGDVM--LGDYRGNKVAVKCIK------NDATAQAFLAEASVMTQLRHSNLVQ 69
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
V+ + VTE G+L Y R + L + + + YL ++
Sbjct: 70 LLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 128
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGT--PEFMAPEVYEEA-Y 202
+HRDL N+ V+ + K+ D GL +++ + G ++ APE EA +
Sbjct: 129 --FVHRDLAARNVLVSEDN-VAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREAAF 182
Query: 203 NELVDIYSFGMCILEMVTF-EYPY 225
+ D++SFG+ + E+ +F PY
Sbjct: 183 STKSDVWSFGILLWEIYSFGRVPY 206
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 133 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 187 -VGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
V + F PE V + Y+ +D++S G + M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-------ILRKSHAAH 185
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA +RK A
Sbjct: 152 QVAKGMEFLASRK--XIHRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 186 CVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKK 243
+ ++MAPE +++ Y D++SFG+ + E+ + PY + +++ G +
Sbjct: 209 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTR 265
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP-- 190
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA + K G
Sbjct: 156 QVAKGMEFLASRK--XIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 191 --EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 133 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 187 -VGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
V + F PE V + Y+ +D++S G + M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 133 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 187 -VGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
V + F PE V + Y+ +D++S G + M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 133 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 187 -VGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
V + F PE V + Y+ +D++S G + M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 132 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 189
Query: 187 -VGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
V + F PE V + Y+ +D++S G + M+ + P+
Sbjct: 190 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP-- 190
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA + K G
Sbjct: 147 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 191 --EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 132 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 189
Query: 187 -VGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
V + F PE V + Y+ +D++S G + M+ + P+
Sbjct: 190 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 133 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 187 -VGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
V + F PE V + Y+ +D++S G + M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 133 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 187 -VGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
V + F PE V + Y+ +D++S G + M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 133 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 187 -VGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
V + F PE V + Y+ +D++S G + M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 138 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 195
Query: 187 -VGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
V + F PE V + Y+ +D++S G + M+ + P+
Sbjct: 196 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 237
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 133 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 187 -VGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
V + F PE V + Y+ +D++S G + M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 133 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 190
Query: 187 -VGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
V + F PE V + Y+ +D++S G + M+ + P+
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP-- 190
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA + K G
Sbjct: 147 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 191 --EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 131 IRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV 188
Query: 187 -VGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMVTFEYPY 225
V + F PE V + Y+ +D++S G + M+ + P+
Sbjct: 189 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 230
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP-- 190
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA + K G
Sbjct: 156 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 191 --EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP-- 190
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA + K G
Sbjct: 156 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 191 --EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-------ILRKSHAAH 185
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA +RK A
Sbjct: 208 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 186 CVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 265 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 298
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-------ILRKSHAAH 185
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA +RK A
Sbjct: 206 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 186 CVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 263 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 296
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 38/223 (17%)
Query: 29 ILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKF 88
++G+G+ VY A+D+ VA +V + D +R+ EI +L LK I++
Sbjct: 35 LIGRGSYGYVYLAYDKNANKNVAIKKVN--RMFEDLIDCKRILREITILNRLKSDYIIRL 92
Query: 89 YTSWV--DTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKLWCRQILRGLLYLHSHDP 146
+ + D + ++ L++ + + VK +L G ++H +
Sbjct: 93 HDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH--ES 150
Query: 147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAI----------------------------L 178
+IHRDLK N +N + VKI D GLA L
Sbjct: 151 GIIHRDLKPANCLLNQD-CSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNL 209
Query: 179 RKSHAAHCVGTPEFMAPE--VYEEAYNELVDIYSFGMCILEMV 219
+K +H V T + APE + +E Y +DI+S G E++
Sbjct: 210 KKQLTSHVV-TRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-------ILRKSHAAH 185
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA +RK A
Sbjct: 199 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 186 CVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 256 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 289
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-------ILRKSHAAH 185
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA +RK A
Sbjct: 201 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 186 CVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 258 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 291
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-------ILRKSHAAH 185
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA +RK A
Sbjct: 147 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 186 CVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 204 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTP-- 190
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA + K G
Sbjct: 156 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 191 --EFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-------ILRKSHAAH 185
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA +RK A
Sbjct: 147 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 186 CVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 204 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-------ILRKSHAAH 185
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA +RK A
Sbjct: 158 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 186 CVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 215 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 248
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-------ILRKSHAAH 185
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA +RK A
Sbjct: 156 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 186 CVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 213 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-------ILRKSHAAH 185
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA +RK A
Sbjct: 152 QVAKGMEFLASRK--XIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 186 CVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 209 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 242
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 133 QILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAA-------ILRKSHAAH 185
Q+ +G+ +L S IHRDL NI ++ + VKI D GLA +RK A
Sbjct: 193 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 186 CVGTPEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF 221
+ ++MAPE +++ Y D++SFG+ + E+ +
Sbjct: 250 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 283
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 34/136 (25%)
Query: 122 VNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA------ 175
++ + V+ + + + L +H ++HRD+K N N + + D GLA
Sbjct: 114 LSFQEVREYMLNLFKALKRIHQFG--IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT 171
Query: 176 ------------------------AILRKSHAAHCVGTPEFMAPEVYEEAYNE--LVDIY 209
+ R+ A GTP F APEV + N+ +D++
Sbjct: 172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMW 231
Query: 210 SFGMCILEMVTFEYPY 225
S G+ L +++ YP+
Sbjct: 232 SAGVIFLSLLSGRYPF 247
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ +GKG V +Y G +VA +K + + E ++ L+H N+++
Sbjct: 27 QTIGKGEFGDVM--LGDYRGNKVAVKCIK------NDATAQAFLAEASVMTQLRHSNLVQ 78
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
V+ + VTE G+L Y R + L + + + YL ++
Sbjct: 79 LLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 137
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGT--PEFMAPEVY-EEAY 202
+HRDL N+ V+ + K+ D GL +++ + G ++ APE E+ +
Sbjct: 138 --FVHRDLAARNVLVSEDN-VAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKF 191
Query: 203 NELVDIYSFGMCILEMVTF-EYPY 225
+ D++SFG+ + E+ +F PY
Sbjct: 192 STKSDVWSFGILLWEIYSFGRVPY 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ +GKG V +Y G +VA +K + + E ++ L+H N+++
Sbjct: 199 QTIGKGEFGDV--MLGDYRGNKVAVKCIK------NDATAQAFLAEASVMTQLRHSNLVQ 250
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
V+ + VTE G+L Y R + L + + + YL ++
Sbjct: 251 LLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 309
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGT--PEFMAPEVY-EEAY 202
+HRDL N+ V+ + K+ D GL +++ + G ++ APE E+ +
Sbjct: 310 --FVHRDLAARNVLVSEDN-VAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKF 363
Query: 203 NELVDIYSFGMCILEMVTF-EYPY 225
+ D++SFG+ + E+ +F PY
Sbjct: 364 STKSDVWSFGILLWEIYSFGRVPY 387
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 28 EILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMK 87
+ +GKG V +Y G +VA +K + + E ++ L+H N+++
Sbjct: 12 QTIGKGEFGDVM--LGDYRGNKVAVKCIK------NDATAQAFLAEASVMTQLRHSNLVQ 63
Query: 88 FYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKL--WCRQILRGLLYLHSHD 145
V+ + VTE G+L Y R + L + + + YL ++
Sbjct: 64 LLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 122
Query: 146 PPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGT--PEFMAPEVY-EEAY 202
+HRDL N+ V+ + K+ D GL +++ + G ++ APE E+ +
Sbjct: 123 --FVHRDLAARNVLVSEDN-VAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKF 176
Query: 203 NELVDIYSFGMCILEMVTF-EYPY 225
+ D++SFG+ + E+ +F PY
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVPY 200
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 24/140 (17%)
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA----AILRKSHAAHCVGT 189
+ RG+ YL IHRDL NI V G KI D GL+ ++K+ V
Sbjct: 141 VARGMDYLSQKQ--FIHRDLAARNILV-GENYVAKIADFGLSRGQEVYVKKTMGRLPV-- 195
Query: 190 PEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKKPDSL 247
+MA E + Y D++S+G+ + E+V+ PY T A++Y+K+ G
Sbjct: 196 -RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-CAELYEKLPQG------ 247
Query: 248 YRVKDP-----EVRRFVEKC 262
YR++ P EV + +C
Sbjct: 248 YRLEKPLNCDDEVYDLMRQC 267
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 24/140 (17%)
Query: 134 ILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLA----AILRKSHAAHCVGT 189
+ RG+ YL IHRDL NI V G KI D GL+ ++K+ V
Sbjct: 151 VARGMDYLSQKQ--FIHRDLAARNILV-GENYVAKIADFGLSRGQEVYVKKTMGRLPV-- 205
Query: 190 PEFMAPE-VYEEAYNELVDIYSFGMCILEMVTF-EYPYSECTHPAQIYKKVVSGKKPDSL 247
+MA E + Y D++S+G+ + E+V+ PY T A++Y+K+ G
Sbjct: 206 -RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-CAELYEKLPQG------ 257
Query: 248 YRVKDP-----EVRRFVEKC 262
YR++ P EV + +C
Sbjct: 258 YRLEKPLNCDDEVYDLMRQC 277
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 101/262 (38%), Gaps = 67/262 (25%)
Query: 24 GRYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
GRY+ I LG G TV+ +D VA VK + E EI LLK ++
Sbjct: 31 GRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVK-----SAQHYTETALDEIKLLKCVR 85
Query: 82 HKN--------IMKFYTSWVDTANRNIN--FVTEMFTSGTLRQY-RLKHKRVNIRAVKLW 130
+ +++ + + I+ V E+ L+ + ++ + +R VK
Sbjct: 86 ESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSI 145
Query: 131 CRQILRGLLYLHSHDPPVIHRDLKCDNIFV------------------------------ 160
RQ+L+GL YLHS +IH D+K +NI +
Sbjct: 146 IRQVLQGLDYLHS-KCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAV 204
Query: 161 ----------------NGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEA-YN 203
N ++ VKI DLG A + K H + T ++ + EV A Y+
Sbjct: 205 STAPAADLLVNPLDPRNADKIRVKIADLGNACWVHK-HFTEDIQTRQYRSIEVLIGAGYS 263
Query: 204 ELVDIYSFGMCILEMVTFEYPY 225
DI+S E+ T +Y +
Sbjct: 264 TPADIWSTACMAFELATGDYLF 285
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + ++L+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 129 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 186
Query: 187 -VGTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPY 225
V + F PE+ + Y+ +D++S G M+ + P+
Sbjct: 187 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + ++L+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 127 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 187 -VGTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPY 225
V + F PE+ + Y+ +D++S G M+ + P+
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + ++L+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 148 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 205
Query: 187 -VGTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPY 225
V + F PE+ + Y+ +D++S G M+ + P+
Sbjct: 206 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 247
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 71/177 (40%), Gaps = 16/177 (9%)
Query: 77 LKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNI-----RAVKLWC 131
L+ H N++ + + +T G+L Y + H+ N +AVK
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSL--YNVLHEGTNFVVDQSQAVKF-A 117
Query: 132 RQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPE 191
RG +LH+ +P + L ++ ++ E + A + + P
Sbjct: 118 LDXARGXAFLHTLEPLIPRHALNSRSVXID----EDXTARISXADVKFSFQSPGRXYAPA 173
Query: 192 FMAPEVY----EEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKP 244
++APE E+ D +SF + + E+VT E P+++ ++ K + G +P
Sbjct: 174 WVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRP 230
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + ++L+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 127 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 187 -VGTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPY 225
V + F PE+ + Y+ +D++S G M+ + P+
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + ++L+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 128 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 185
Query: 187 -VGTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPY 225
V + F PE+ + Y+ +D++S G M+ + P+
Sbjct: 186 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + ++L+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 128 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 185
Query: 187 -VGTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPY 225
V + F PE+ + Y+ +D++S G M+ + P+
Sbjct: 186 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + ++L+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 127 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 187 -VGTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPY 225
V + F PE+ + Y+ +D++S G M+ + P+
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + ++L+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 127 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 187 -VGTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPY 225
V + F PE+ + Y+ +D++S G M+ + P+
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + ++L+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 127 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 187 -VGTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPY 225
V + F PE+ + Y+ +D++S G M+ + P+
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 127 VKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHC 186
++ + ++L+ L Y HS ++HRD+K N+ ++ ++++ D GLA +
Sbjct: 127 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 187 -VGTPEFMAPEVYEEA--YNELVDIYSFGMCILEMVTFEYPY 225
V + F PE+ + Y+ +D++S G M+ + P+
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 150 HRDLKCDNIFVNGNQGEVKIGDLGLAAIL---RKSHAAHCVGTPEFMAPEVYEEAYNEL- 205
HRD+K +NI V+ + + D G+A+ + + + VGT + APE + E++
Sbjct: 157 HRDVKPENILVSADDFAYLV-DFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 206 VDIYSFGMCILEMVTFEYPY 225
DIY+ + E +T PY
Sbjct: 216 ADIYALTCVLYECLTGSPPY 235
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 28/123 (22%)
Query: 123 NIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGE---------------- 166
+I +KL+C +IL+ L YL + H DLK +NI ++ E
Sbjct: 135 HIEDIKLYCIEILKALNYLRKMS--LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192
Query: 167 --------VKIGDLGLAAILRKSHAAHCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILE 217
+K+ D G A H + + T ++ APEV ++ D++SFG + E
Sbjct: 193 IYRTKSTGIKLIDFGCATFKSDYHGS-IINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251
Query: 218 MVT 220
+ T
Sbjct: 252 LYT 254
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 124 IRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNI-FVNGN-----------------QG 165
I V+ Q+ + + +LH D + H DLK +NI FVN +
Sbjct: 136 IHQVRHMAFQLCQAVKFLH--DNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKST 193
Query: 166 EVKIGDLGLAAILRKSHAAHCVGTPEFMAPEV-YEEAYNELVDIYSFGMCILE 217
V++ D G +A H + V T + APEV E +++ D++S G I E
Sbjct: 194 AVRVVDFG-SATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFE 245
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 27 NEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK---HK 83
+ +LG+GA VY A + A N+ K +Q P + Y L++ LK
Sbjct: 70 HHLLGEGAFAQVYEA--TQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQH 127
Query: 84 NIMKFYTSWVDTANRNINFVTEMFTSGTLRQ----YRLKHKRVNIRAVKLWCRQILRGLL 139
MKFY++ + N ++ V E+++ GTL Y+ ++V + + + +L
Sbjct: 128 MFMKFYSAHL-FQNGSV-LVGELYSYGTLLNAINLYKNTPEKVMPQGLVI---SFAMRML 182
Query: 140 YL--HSHDPPVIHRDLKCDNIFVNGN 163
Y+ HD +IH D+K DN F+ GN
Sbjct: 183 YMIEQVHDCEIIHGDIKPDN-FILGN 207
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 120 KRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVN-GNQGE-VKIGDLGLAAI 177
++ +++ V L Q++ + Y+HS + IHRD+K DN + G +G V I D GLA
Sbjct: 100 RKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157
Query: 178 LR 179
R
Sbjct: 158 YR 159
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 120 KRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVN-GNQGE-VKIGDLGLAAI 177
++ +++ V L Q++ + Y+HS + IHRD+K DN + G +G V I D GLA
Sbjct: 100 RKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157
Query: 178 LR 179
R
Sbjct: 158 YR 159
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 120 KRVNIRAVKLWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVN-GNQGE-VKIGDLGLAAI 177
++ +++ V L Q++ + Y+HS + IHRD+K DN + G +G V I D GLA
Sbjct: 98 RKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 155
Query: 178 LR 179
R
Sbjct: 156 YR 157
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 24 GRYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
GRY+ I LG G TV+ ++D VA VK + E EI LLK+++
Sbjct: 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK-----SAEHYTETALDEIRLLKSVR 91
Query: 82 HKN------------IMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVK 128
+ + + F S V+ +I V E+ L+ + ++ + + VK
Sbjct: 92 NSDPNDPNREMVVQLLDDFKISGVN--GTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVK 149
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVK 168
+Q+L+GL YLH+ +IH D+K +NI ++ N+ ++
Sbjct: 150 KIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIR 188
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 24 GRYNEI--LGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLK 81
GRY+ I LG G TV+ ++D VA VK + E EI LLK+++
Sbjct: 21 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK-----SAEHYTETALDEIRLLKSVR 75
Query: 82 HKN------------IMKFYTSWVDTANRNINFVTEMFTSGTLRQY-RLKHKRVNIRAVK 128
+ + + F S V+ +I V E+ L+ + ++ + + VK
Sbjct: 76 NSDPNDPNREMVVQLLDDFKISGVN--GTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVK 133
Query: 129 LWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVK 168
+Q+L+GL YLH+ +IH D+K +NI ++ N+ ++
Sbjct: 134 KIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIR 172
>pdb|1LRV|A Chain A, A Leucine-Rich Repeat Variant With A Novel Repetitive
Protein Structural Motif
Length = 244
Score = 32.3 bits (72), Expect = 0.97, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 236 KKVVSGKKPDS----LYRVKDPEVRRFVEKCLATVSLRLSARELLNDPFLQIDDCESNLR 291
+K+V+ + P+ + + +PEVRR V L L ELL+DP +
Sbjct: 163 RKLVAKRLPEESLGLMTQDPEPEVRRIVASRLRGDDLL----ELLHDPDWTVRLAAVEHA 218
Query: 292 SLDYSRELDDMDPLIR 307
SL+ RELD+ DP +R
Sbjct: 219 SLEALRELDEPDPEVR 234
>pdb|2PH7|A Chain A, Crystal Structure Of Af2093 From Archaeoglobus Fulgidus
pdb|2PH7|B Chain B, Crystal Structure Of Af2093 From Archaeoglobus Fulgidus
Length = 246
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 237 KVVSGKKPDSLYRVKDPEVRRFVEKC-LATVSLRLSA--RELLNDPFLQIDDCESNLRSL 293
K ++G+K V + E+RR +C L RL EL+ D + DC L+SL
Sbjct: 12 KXLAGRKA-----VTEEEIRRKAIRCALKIXGARLVGIDAELIEDVTCSLIDCPITLKSL 66
Query: 294 DYSRELDDMDPLIRQPHI 311
+S ++ D L PH+
Sbjct: 67 HFSEKVKIGDVLFYHPHV 84
>pdb|4F8A|A Chain A, Cyclic Nucleotide Binding-Homology Domain From Mouse Eag1
Potassium Channel
Length = 160
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 49 EVAWNQVKLYDFLQSPEDLERL-YCEIHLLKTLKHKNIMKFYTSWVDTANRNI 100
+V W + L QS ++ L YC++H++K + +++FYT++ + +RN+
Sbjct: 99 DVFWKEATLA---QSCANVRALTYCDLHVIKRDALQKVLEFYTAFSHSFSRNL 148
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,468,724
Number of Sequences: 62578
Number of extensions: 1004465
Number of successful extensions: 4585
Number of sequences better than 100.0: 952
Number of HSP's better than 100.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 806
Number of HSP's that attempted gapping in prelim test: 2921
Number of HSP's gapped (non-prelim): 1031
length of query: 745
length of database: 14,973,337
effective HSP length: 106
effective length of query: 639
effective length of database: 8,340,069
effective search space: 5329304091
effective search space used: 5329304091
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)