Query 004572
Match_columns 744
No_of_seqs 391 out of 2665
Neff 7.5
Searched_HMMs 29240
Date Tue Mar 26 18:51:50 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004572.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1872-1876//hhsearch_pdb/004572hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l6x_A Catenin delta-1; cateni 1.0 1 1 244.8 19.3 274 419-698 48-387 (584)
2 1xm9_A Plakophilin 1; armadill 1.0 1 1 243.5 18.0 271 420-696 3-361 (457)
3 3nmw_A APC variant protein; AR 1.0 1 1 243.1 22.0 267 434-702 47-341 (354)
4 3nmz_A APC variant protein; pr 1.0 1 1 241.6 20.9 263 435-699 164-454 (458)
5 1xm9_A Plakophilin 1; armadill 1.0 1 1 230.2 21.5 271 419-696 44-450 (457)
6 3now_A UNC-45 protein, SD10334 1.0 1 1 228.8 21.7 279 419-702 495-789 (810)
7 3now_A UNC-45 protein, SD10334 1.0 1 1 226.7 23.0 274 419-696 421-738 (810)
8 3nmz_A APC variant protein; pr 1.0 1 1 225.5 20.1 277 419-695 70-408 (458)
9 3l6x_A Catenin delta-1; cateni 1.0 1 1 223.4 21.4 270 419-694 90-475 (584)
10 3ul1_B Importin subunit alpha- 1.0 1 1 220.5 21.1 274 419-693 143-428 (510)
No 1
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=1.00 E-value=1 Score=244.77 Aligned_cols=274 Identities=13% Similarity=0.099 Sum_probs=222.3
Q ss_pred CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC--C
Q ss_conf 88288998513999899999999999976105002277860797287999961523579999999999999997449--9
Q 004572 419 GTDLTSLSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAILSQ--S 496 (744)
Q Consensus 419 ~~~~~ll~~L~s~~~e~q~~Al~~Lr~Lak~~~~~r~~i~~~G~I~~Lv~lL~~~~~~~d~~~q~~A~~~Ll~L~~~--~ 496 (744)
..++.++..|.+.+.++|..|+..|++++..+.++|..+++.|+||+||++|++ .+..+|+.|+++|.|++.. .
T Consensus 48 ~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s----~~~~vq~~Aa~AL~nLa~~~~~ 123 (584)
T 3l6x_A 48 PELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDH----PKKEVHLGACGALKNISFGRDQ 123 (584)
T ss_dssp CCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGC----SSHHHHHHHHHHHHHHTSSSCH
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCC----CCHHHHHHHHHHHHHHHCCCCH
T ss_conf 439999999779999999999999999980895999999985990799998779----9989999999999998735988
Q ss_pred CCCCCCCCCCCHHHHHHHHCCH----HHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCC------------------
Q ss_conf 9875223454348899942122----499999999984138012689995498411310122------------------
Q 004572 497 RDEMPLFHKDEICTFALFLDSE----IMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLD------------------ 554 (744)
Q Consensus 497 ~nk~~i~~~Gai~~Lv~lL~s~----~~e~Al~~L~~Ls~~~~~k~~I~~~g~Ip~Lv~lL~------------------ 554 (744)
+||..+++.|+|++|+.+|.++ ..+.++++|++|+.++++|..|+. +++|+|+++|.
T Consensus 124 ~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~~-~alp~Lv~LL~~p~sg~~~~~~~~~k~~~ 202 (584)
T 3l6x_A 124 DNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVD-HALHALTDEVIIPHSGWEREPNEDCKPRH 202 (584)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHHH-HTHHHHHHHTHHHHHCCC----------C
T ss_pred HHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH-CCHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 99999998589999999976799999999999999998579613689986-30899999983133454334332111245
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCH-HHHHHHC-CCCHHHHHHHCC--------CCHHHHHHHHHHHHC-CHHHH-------
Q ss_conf 58998999999999983379613-9999751-893768997049--------617999999999825-99889-------
Q 004572 555 TGTRESRELAIKILCNLSSGDNI-VYHILYL-DCTSKLVRLLED--------PILSSYCIKIIKALC-TSEAR------- 616 (744)
Q Consensus 555 s~~~~~k~~A~~aL~nLs~~~~n-~~~iv~~-G~I~~Lv~lL~~--------~~l~~~al~iL~nLa-~~e~~------- 616 (744)
..+..++++|+++|+||+.+.++ +..|++. |+++.|+.++.+ ...++.|+++|+||+ ..+..
T Consensus 203 ~~d~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~~~~~~enav~aL~NLs~~~~~e~~~~~~~ 282 (584)
T 3l6x_A 203 IEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERY 282 (584)
T ss_dssp CCCHHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHTTHHHHSTTCCC-
T ss_pred CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf 55499999999999999638878899999848958999999987401367438899999999998642321014524555
Q ss_pred -------------------HHHHHHCCCHHHHHHHHC-CCCHHHHHHHHHHHHHHHCCCH----HHHHHHHHCCCHHHHH
Q ss_conf -------------------999941994999999872-8999999999999999811898----9889998599499999
Q 004572 617 -------------------AAVAESNPCIDSIAKLLE-TGTREEQEHIVDVLLSLCHEHT----KYCQLANTESIIQCVV 672 (744)
Q Consensus 617 -------------------~~i~~~~g~I~~Lv~lL~-~~s~~~~e~A~~iL~~Lc~~~~----~~~~~v~~~G~i~~Lv 672 (744)
..+.+ .++|+.|+.+|. ..++.++|+|+++|.+||.+.. .....+.++|++|.|+
T Consensus 283 ~~~~~~~~~~~~~~~~~Gve~L~~-~~~v~~Ll~LL~~s~~~~v~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv 361 (584)
T 3l6x_A 283 QEAAPNVANNTGTSPARGYELLFQ-PEVVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIA 361 (584)
T ss_dssp -------------CCCCGGGGGGS-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCHHHHHHHC-CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHH
T ss_conf 430243344531147211788816-0079999999714787889999999999987288645389999999837699999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 98306997899999999999330187
Q 004572 673 DISVNGNSRGKETAKELIMLLDHCKE 698 (744)
Q Consensus 673 ~L~~~~s~~~k~~A~~lL~~l~~~~~ 698 (744)
.|+.++++++++.|+++|+.|.....
T Consensus 362 ~LL~s~~~~v~~~A~~aL~nLs~~~~ 387 (584)
T 3l6x_A 362 DLLTNEHERVVKAASGALRNLAVDAR 387 (584)
T ss_dssp HGGGCSCHHHHHHHHHHHHHHHTTCS
T ss_pred HHHCCCCHHHHHHHHHHHHHHHCCHH
T ss_conf 99848987999999999999837823
No 2
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=1.00 E-value=1 Score=243.47 Aligned_cols=271 Identities=15% Similarity=0.151 Sum_probs=220.9
Q ss_pred CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC-CCC
Q ss_conf 8288998513999899999999999976105002277860797287999961523579999999999999997449-998
Q 004572 420 TDLTSLSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAILSQ-SRD 498 (744)
Q Consensus 420 ~~~~ll~~L~s~~~e~q~~Al~~Lr~Lak~~~~~r~~i~~~G~I~~Lv~lL~~~~~~~d~~~q~~A~~~Ll~L~~~-~~n 498 (744)
.++.++..|.+++.++|..|+..|++++.+++.++..+.+.|+||.||++|++ .+..+|+.|+++|.|++.. +++
T Consensus 3 ~l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s----~~~~~~~~A~~aL~nLa~~~~~~ 78 (457)
T 1xm9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS----PNQNVQQAAAGALRNLVFRSTTN 78 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTS----SCHHHHHHHHHHHHHHHSSCHHH
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCC----CCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 88999998779998999999999999976985789999986898999998769----99999999999999984498777
Q ss_pred CCCCCCCCCHHHHHHHHC-CH---HHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCC--------CCC--------CH
Q ss_conf 752234543488999421-22---49999999998413801268999549841131012--------258--------99
Q 004572 499 EMPLFHKDEICTFALFLD-SE---IMEEALEIIEVLSHQQNYASELVASGIIPSIIKFL--------DTG--------TR 558 (744)
Q Consensus 499 k~~i~~~Gai~~Lv~lL~-s~---~~e~Al~~L~~Ls~~~~~k~~I~~~g~Ip~Lv~lL--------~s~--------~~ 558 (744)
+..+++.|++++|+.+|. ++ ..+.++++|+||+.+++++..|++ |++|+|+++| +++ +.
T Consensus 79 k~~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~ 157 (457)
T 1xm9_A 79 KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDP 157 (457)
T ss_dssp HHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHH-HHHHHHHHHTTHHHHTCC---------CCCH
T ss_pred HHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHH-CCHHHHHHHHHCCCCCCCCCCCCHHCCCCCH
T ss_conf 999997698999999986199889999999999998558776899995-5399999998243344455763010122548
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHC-CCCHHHHHHHCC--------CCHHHHHHHHHHHHC-CHHHH------------
Q ss_conf 89999999999833796139999751-893768997049--------617999999999825-99889------------
Q 004572 559 ESRELAIKILCNLSSGDNIVYHILYL-DCTSKLVRLLED--------PILSSYCIKIIKALC-TSEAR------------ 616 (744)
Q Consensus 559 ~~k~~A~~aL~nLs~~~~n~~~iv~~-G~I~~Lv~lL~~--------~~l~~~al~iL~nLa-~~e~~------------ 616 (744)
.+..+|+++|+||+.+++++..+++. |++++|+.+|.+ ...++.|+.+|+||+ ..++.
T Consensus 158 ~v~~~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~nLs~~~~~~~~~~~~~~~~~~ 237 (457)
T 1xm9_A 158 EVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNA 237 (457)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHCCCCC
T ss_conf 99999999999982699999999986897999999999623135775488999999999660322103752121111343
Q ss_pred ---------------------------------------HHHHHHCCCHHHHHHHHCC-CCHHHHHHHHHHHHHHHCCCH
Q ss_conf ---------------------------------------9999419949999998728-999999999999999811898
Q 004572 617 ---------------------------------------AAVAESNPCIDSIAKLLET-GTREEQEHIVDVLLSLCHEHT 656 (744)
Q Consensus 617 ---------------------------------------~~i~~~~g~I~~Lv~lL~~-~s~~~~e~A~~iL~~Lc~~~~ 656 (744)
..+.+ .++++.|+.+|.+ .++.+++.|+++|.+||.++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~l~~L~~lL~~~~~~~~~e~a~~aL~nl~~~~~ 316 (457)
T 1xm9_A 238 RNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYH-SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKG 316 (457)
T ss_dssp ----------------------------CCCCCSSCCGGGGGGS-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSS
T ss_pred CCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHC-CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 21235666654120222566624445775112557047899967-02599999998605879999999999888605767
Q ss_pred H----H-HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9----8-89998599499999983069978999999999993301
Q 004572 657 K----Y-CQLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHC 696 (744)
Q Consensus 657 ~----~-~~~v~~~G~i~~Lv~L~~~~s~~~k~~A~~lL~~l~~~ 696 (744)
. . ...+.+.|++|.|++++.+++.++++.|+++|+.+...
T Consensus 317 ~~~~~~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~~ 361 (457)
T 1xm9_A 317 LMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 361 (457)
T ss_dssp SHHHHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC
T ss_conf 632889999998739946999987179776999999999998149
No 3
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=1.00 E-value=1 Score=243.08 Aligned_cols=267 Identities=14% Similarity=0.122 Sum_probs=232.1
Q ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCC-------CCCCHHHHHHHHHHHHHHHCCCC-CCCCCC-C
Q ss_conf 99999999999976105002277860797287999961523-------57999999999999999744999-875223-4
Q 004572 434 GSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAH-------NLCDAKAQKDGAEVLLAILSQSR-DEMPLF-H 504 (744)
Q Consensus 434 e~q~~Al~~Lr~Lak~~~~~r~~i~~~G~I~~Lv~lL~~~~-------~~~d~~~q~~A~~~Ll~L~~~~~-nk~~i~-~ 504 (744)
..++.|++.|.+++.+ +++|..|.+.|++++|+.+|.... +..+..+|+.|+++|.|++.++. ++..+. .
T Consensus 47 ~~~~~A~~aL~nls~d-~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~~i~~~ 125 (354)
T 3nmw_A 47 HQICPAVCVLMKLSFD-EEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSM 125 (354)
T ss_dssp GTHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCC-HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHC
T ss_conf 8898999999998389-889999998688799999973511012446788999999999999999975998889999981
Q ss_pred CCCHHHHHHHHCCH---HHHHHHHHHHHHCCC--HHHHHHHHHCCCCHHHHCCC-CCCCHHHHHHHHHHHHHHCC-CCCH
Q ss_conf 54348899942122---499999999984138--01268999549841131012-25899899999999998337-9613
Q 004572 505 KDEICTFALFLDSE---IMEEALEIIEVLSHQ--QNYASELVASGIIPSIIKFL-DTGTRESRELAIKILCNLSS-GDNI 577 (744)
Q Consensus 505 ~Gai~~Lv~lL~s~---~~e~Al~~L~~Ls~~--~~~k~~I~~~g~Ip~Lv~lL-~s~~~~~k~~A~~aL~nLs~-~~~n 577 (744)
.|+|+.|+.+|+++ ..+.|+++|.||+.. +++|..|++.|+||+|+++| ++++.+.++.|+.+|+||+. .++|
T Consensus 126 ~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~n 205 (354)
T 3nmw_A 126 KGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTEN 205 (354)
T ss_dssp HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 79699999987799989999999999998646888899999987989999999832798999999999999987368321
Q ss_pred HHHHH-HCCCCHHHHHHHCCC------CHHHHHHHHHHHHC-----CHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
Q ss_conf 99997-518937689970496------17999999999825-----9988999994199499999987289999999999
Q 004572 578 VYHIL-YLDCTSKLVRLLEDP------ILSSYCIKIIKALC-----TSEARAAVAESNPCIDSIAKLLETGTREEQEHIV 645 (744)
Q Consensus 578 ~~~iv-~~G~I~~Lv~lL~~~------~l~~~al~iL~nLa-----~~e~~~~i~~~~g~I~~Lv~lL~~~s~~~~e~A~ 645 (744)
+..++ ..|++|.|+.+|.++ .+++.|+++|+||+ +++++..+.+ .|+++.|+++|++++..++++|+
T Consensus 206 k~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~-~g~i~~Lv~lL~~~~~~v~~~A~ 284 (354)
T 3nmw_A 206 KADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRE-NNCLQTLLQHLKSHSLTIVSNAC 284 (354)
T ss_dssp HHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHT-TTHHHHHHHHTTCSCHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-CCCHHHHHHHHCCCCHHHHHHHH
T ss_conf 17899861848999999526788632889998899999987611589899999997-59899999998489768899999
Q ss_pred HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 999998118989889998599499999983069978999999999993301877875
Q 004572 646 DVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKEDNAS 702 (744)
Q Consensus 646 ~iL~~Lc~~~~~~~~~v~~~G~i~~Lv~L~~~~s~~~k~~A~~lL~~l~~~~~~~~~ 702 (744)
++|.+|+.++.+.++.+.+.|++|.|++++.++++++++.|+.+|+.|........+
T Consensus 285 ~aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~~A~~aL~nL~~~~~~~~~ 341 (354)
T 3nmw_A 285 GTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPAKYK 341 (354)
T ss_dssp HHHHHHTSSCHHHHHHHHHTTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 999998479988999999888999999998499989999999999999859988876
No 4
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=1.00 E-value=1 Score=241.58 Aligned_cols=263 Identities=15% Similarity=0.134 Sum_probs=229.0
Q ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCC-------CCCCHHHHHHHHHHHHHHHCCCC-CCCCCC-CC
Q ss_conf 9999999999976105002277860797287999961523-------57999999999999999744999-875223-45
Q 004572 435 SQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAH-------NLCDAKAQKDGAEVLLAILSQSR-DEMPLF-HK 505 (744)
Q Consensus 435 ~q~~Al~~Lr~Lak~~~~~r~~i~~~G~I~~Lv~lL~~~~-------~~~d~~~q~~A~~~Ll~L~~~~~-nk~~i~-~~ 505 (744)
.++.|++.|.+++.+ +++|..|.+.|++++|+.+|.... +..+..++++|+++|.|++.++. ++..+. ..
T Consensus 164 ~~~qAv~aL~nls~~-~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~ 242 (458)
T 3nmz_A 164 QICPAVCVLMKLSFD-EEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMK 242 (458)
T ss_dssp TTHHHHHHHHHHTTS-HHHHHHHHHTTHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHCCC-HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCC
T ss_conf 789999999996599-8999999988988999999865300123356789999999999999998679962478999817
Q ss_pred CCHHHHHHHHCCH---HHHHHHHHHHHHCCC--HHHHHHHHHCCCCHHHHCC-CCCCCHHHHHHHHHHHHHHCC-CCCHH
Q ss_conf 4348899942122---499999999984138--0126899954984113101-225899899999999998337-96139
Q 004572 506 DEICTFALFLDSE---IMEEALEIIEVLSHQ--QNYASELVASGIIPSIIKF-LDTGTRESRELAIKILCNLSS-GDNIV 578 (744)
Q Consensus 506 Gai~~Lv~lL~s~---~~e~Al~~L~~Ls~~--~~~k~~I~~~g~Ip~Lv~l-L~s~~~~~k~~A~~aL~nLs~-~~~n~ 578 (744)
|+|++|+.+|.++ ..+.|+++|.||+.. ++++..|++.|+||+|+++ +.+++..+++.|+.+|+||+. +++|+
T Consensus 243 GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk 322 (458)
T 3nmz_A 243 GCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENK 322 (458)
T ss_dssp HHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHH
T ss_pred CCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 92999999994899999999999999986479889999999869989999998558999999999999999804887789
Q ss_pred HHHH-HCCCCHHHHHHHCCC------CHHHHHHHHHHHHC-----CHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 9997-518937689970496------17999999999825-----99889999941994999999872899999999999
Q 004572 579 YHIL-YLDCTSKLVRLLEDP------ILSSYCIKIIKALC-----TSEARAAVAESNPCIDSIAKLLETGTREEQEHIVD 646 (744)
Q Consensus 579 ~~iv-~~G~I~~Lv~lL~~~------~l~~~al~iL~nLa-----~~e~~~~i~~~~g~I~~Lv~lL~~~s~~~~e~A~~ 646 (744)
..++ ..|++|.|+.+|..+ .+.+.|+++|+||+ +++++..+.+ .|+|+.|+++|.+++..++++|++
T Consensus 323 ~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~-~G~i~~Lv~LL~~~~~~v~~~A~~ 401 (458)
T 3nmz_A 323 ADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRE-NNCLQTLLQHLKSHSLTIVSNACG 401 (458)
T ss_dssp HHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-TTHHHHHHHHSSCSCHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH-CCCHHHHHHHHCCCCHHHHHHHHH
T ss_conf 9999862849999999627897341999999999999998623699899999997-064999999980798578999999
Q ss_pred HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99998118989889998599499999983069978999999999993301877
Q 004572 647 VLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKED 699 (744)
Q Consensus 647 iL~~Lc~~~~~~~~~v~~~G~i~~Lv~L~~~~s~~~k~~A~~lL~~l~~~~~~ 699 (744)
+|++|+.++.+.+..+.+.|+++.|+.++.+++.++++.|+.+|+.|......
T Consensus 402 aL~nLa~~~~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~~Aa~AL~nL~~~~p~ 454 (458)
T 3nmz_A 402 TLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPA 454 (458)
T ss_dssp HHHHHHSSCHHHHHHHHHHTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTCCSC
T ss_pred HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999729999999999888999999998089999999999999999828875
No 5
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=1.00 E-value=1 Score=230.16 Aligned_cols=271 Identities=14% Similarity=0.147 Sum_probs=225.5
Q ss_pred CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHC-CCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 88288998513999899999999999976105002277860797287999961-52357999999999999999744999
Q 004572 419 GTDLTSLSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLK-DAHNLCDAKAQKDGAEVLLAILSQSR 497 (744)
Q Consensus 419 ~~~~~ll~~L~s~~~e~q~~Al~~Lr~Lak~~~~~r~~i~~~G~I~~Lv~lL~-~~~~~~d~~~q~~A~~~Ll~L~~~~~ 497 (744)
+.++.++..|.+.+.++|..|+++|++++.++++++..+++.|+||+|+++|+ + .+..+++.++++|.|++.++.
T Consensus 44 g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv~lL~~~----~~~~~~~~a~~aL~nLa~~~~ 119 (457)
T 1xm9_A 44 GGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRT----GNAEIQKQLTGLLWNLSSTDE 119 (457)
T ss_dssp THHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTTC----CCHHHHHHHHHHHHHHHTSSS
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHC----CCHHHHHHHHHHHHHHHCCHH
T ss_conf 8989999987699999999999999998449877799999769899999998619----988999999999999855877
Q ss_pred CCCCCCCCCCHHHHHHHHC--------CHH-----------HHHHHHHHHHHCCCHHHHHHHHHC-CCCHHHHCCCCCC-
Q ss_conf 8752234543488999421--------224-----------999999999841380126899954-9841131012258-
Q 004572 498 DEMPLFHKDEICTFALFLD--------SEI-----------MEEALEIIEVLSHQQNYASELVAS-GIIPSIIKFLDTG- 556 (744)
Q Consensus 498 nk~~i~~~Gai~~Lv~lL~--------s~~-----------~e~Al~~L~~Ls~~~~~k~~I~~~-g~Ip~Lv~lL~s~- 556 (744)
++..+++ |++++|+.+|. ++. ...|+++|.||+..++++..+.+. |++|+|+.+|.++
T Consensus 120 ~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~~~ 198 (457)
T 1xm9_A 120 LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCV 198 (457)
T ss_dssp THHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHHHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHH
T ss_pred HHHHHHH-CCHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHC
T ss_conf 6899995-539999999824334445576301012254899999999999982699999999986897999999999623
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 004572 557 -------------------------------------------------------------------------------- 556 (744)
Q Consensus 557 -------------------------------------------------------------------------------- 556 (744)
T Consensus 199 ~~~~~~~~~~e~a~~~L~nLs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (457)
T 1xm9_A 199 AASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGW 278 (457)
T ss_dssp HHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC----------------------------CCCCCSSCCGGGG
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 13577548899999999966032210375212111134321235666654120222566624445775112557047899
Q ss_pred ------------------CHHHHHHHHHHHHHHCCCCCHH-----HHHH-HCCCCHHHHHHHCCC--CHHHHHHHHHHHH
Q ss_conf ------------------9989999999999833796139-----9997-518937689970496--1799999999982
Q 004572 557 ------------------TRESRELAIKILCNLSSGDNIV-----YHIL-YLDCTSKLVRLLEDP--ILSSYCIKIIKAL 610 (744)
Q Consensus 557 ------------------~~~~k~~A~~aL~nLs~~~~n~-----~~iv-~~G~I~~Lv~lL~~~--~l~~~al~iL~nL 610 (744)
+...++.|+++|.||+...... ..++ ++|++|.|+++|.++ .++..|+++|.||
T Consensus 279 l~~~~~l~~L~~lL~~~~~~~~~e~a~~aL~nl~~~~~~~~~~~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nl 358 (457)
T 1xm9_A 279 LYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNM 358 (457)
T ss_dssp GGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 96702599999998605879999999999888605767632889999998739946999987179776999999999998
Q ss_pred C-CHHHHHHHHHHCCCHHHHHHHHCCCC------HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCC-CHHH
Q ss_conf 5-99889999941994999999872899------99999999999998118989889998599499999983069-9789
Q 004572 611 C-TSEARAAVAESNPCIDSIAKLLETGT------REEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNG-NSRG 682 (744)
Q Consensus 611 a-~~e~~~~i~~~~g~I~~Lv~lL~~~s------~~~~e~A~~iL~~Lc~~~~~~~~~v~~~G~i~~Lv~L~~~~-s~~~ 682 (744)
+ +++++..|.. ++++.|+++|..++ +.+...++.+|.+++.++......+.+.|+++.|+.++.++ ++++
T Consensus 359 s~~~~~~~~i~~--~~i~~Lv~lL~~~~~~~~~~~~v~~~~l~~l~ni~~~~~~~~~~i~~~g~l~~L~~L~~~~~~~~i 436 (457)
T 1xm9_A 359 SRHPLLHRVMGN--QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 436 (457)
T ss_dssp HTSGGGHHHHHH--HTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCTTCHHH
T ss_pred HCCHHHHHHHHH--HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCHHH
T ss_conf 149778999997--516999986658788888858899999999999986398989999976988999999737996799
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999993301
Q 004572 683 KETAKELIMLLDHC 696 (744)
Q Consensus 683 k~~A~~lL~~l~~~ 696 (744)
+++|..+|..+-.+
T Consensus 437 ~~~A~~~L~~~~~~ 450 (457)
T 1xm9_A 437 AEAARLLLSDMWSS 450 (457)
T ss_dssp HHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHHCC
T ss_conf 99999999999710
No 6
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=228.82 Aligned_cols=279 Identities=14% Similarity=0.143 Sum_probs=242.8
Q ss_pred CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 88288998513999899999999999976105002277860797287999961523579999999999999997449998
Q 004572 419 GTDLTSLSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAILSQSRD 498 (744)
Q Consensus 419 ~~~~~ll~~L~s~~~e~q~~Al~~Lr~Lak~~~~~r~~i~~~G~I~~Lv~lL~~~~~~~d~~~q~~A~~~Ll~L~~~~~n 498 (744)
+.++.|+..|.+++..+|..|++.|.+++. +.++|..+.+.|++|+|+.+|++ ++..+++.|+++|.+++.+...
T Consensus 495 GaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~-d~~~r~~Vv~~Gaip~Lv~LL~s----~~~~~k~~Aa~AL~nL~~~~~p 569 (810)
T 3now_A 495 GITTALCALAKTESHNSQELIARVLNAVCG-LKELRGKVVQEGGVKALLRMALE----GTEKGKRHATQALARIGITINP 569 (810)
T ss_dssp THHHHHHHHHTCCCHHHHHHHHHHHHHHHT-SHHHHHHHHHTTHHHHHHHHHHS----SCHHHHHHHHHHHHHHHHHSCH
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHCC-CHHHHHHHHHCCCHHHHHHHHCC----CCHHHHHHHHHHHHHHHCCCCH
T ss_conf 599999999859998999999999999858-98899999987899999999705----9888999999999999658985
Q ss_pred CCCCC---CCCCHHHHHHHHCCH-H---HHHHHHHHHHHCCC-HHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 75223---454348899942122-4---99999999984138-0126899954984113101225899899999999998
Q 004572 499 EMPLF---HKDEICTFALFLDSE-I---MEEALEIIEVLSHQ-QNYASELVASGIIPSIIKFLDTGTRESRELAIKILCN 570 (744)
Q Consensus 499 k~~i~---~~Gai~~Lv~lL~s~-~---~e~Al~~L~~Ls~~-~~~k~~I~~~g~Ip~Lv~lL~s~~~~~k~~A~~aL~n 570 (744)
...+. ..|++++|+.+|.++ . ...|+.+|.||+.. ++++..|.+.|++|.|+.+|.+++..+++.|+++|+|
T Consensus 570 ~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~N 649 (810)
T 3now_A 570 EVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCN 649 (810)
T ss_dssp HHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHH
T ss_pred HHHHCCHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 66531002315799999986789827889999999999846998999999986888999999828999999999999999
Q ss_pred HCCCCCHHHHHHH-CCCCHHHHHHHCC--CCHHHHHHHHHHHHC--CHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
Q ss_conf 3379613999975-1893768997049--617999999999825--9988999994199499999987289999999999
Q 004572 571 LSSGDNIVYHILY-LDCTSKLVRLLED--PILSSYCIKIIKALC--TSEARAAVAESNPCIDSIAKLLETGTREEQEHIV 645 (744)
Q Consensus 571 Ls~~~~n~~~iv~-~G~I~~Lv~lL~~--~~l~~~al~iL~nLa--~~e~~~~i~~~~g~I~~Lv~lL~~~s~~~~e~A~ 645 (744)
|+.++++...++. .|+++.|+.++.. ..+...|+++|+||+ ++.....+++..|+++.|++++.+++..+|..|+
T Consensus 650 La~~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~ 729 (810)
T 3now_A 650 LVMSEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGI 729 (810)
T ss_dssp HTTSHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHH
T ss_pred HHCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
T ss_conf 96795999999861680899999846999899999999999986799899999998748898999987799889999999
Q ss_pred HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCC---CHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 999998118989889998599499999983069---978999999999993301877875
Q 004572 646 DVLLSLCHEHTKYCQLANTESIIQCVVDISVNG---NSRGKETAKELIMLLDHCKEDNAS 702 (744)
Q Consensus 646 ~iL~~Lc~~~~~~~~~v~~~G~i~~Lv~L~~~~---s~~~k~~A~~lL~~l~~~~~~~~~ 702 (744)
++|.+++.++.+....+.+.|++++|+.++... +.++.+.|..+|..+-+.+..+..
T Consensus 730 ~aL~NL~~~s~e~~~~l~e~G~i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~~g~~~~~ 789 (810)
T 3now_A 730 VIILNMINAGEEIAKKLFETDIMELLSGLGQLPDDTRAKAREVATQCLAAAERYRIIERS 789 (810)
T ss_dssp HHHHHHHTTCHHHHHHHHTSTHHHHHTTSCCCTTSTTHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 999999869999999999897889999998276657679999999999999867986678
No 7
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=226.67 Aligned_cols=274 Identities=13% Similarity=0.082 Sum_probs=234.2
Q ss_pred CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC-----------------------------HHH---HHHHHCCCHHHH
Q ss_conf 882889985139998999999999999761050-----------------------------022---778607972879
Q 004572 419 GTDLTSLSKLASRPWGSQCDAVENIKKLLKDNG-----------------------------QSR---HLAFLNSYVKPL 466 (744)
Q Consensus 419 ~~~~~ll~~L~s~~~e~q~~Al~~Lr~Lak~~~-----------------------------~~r---~~i~~~G~I~~L 466 (744)
+.++.++..|.+.+..++..|+.+|.+++.+.+ .++ ..+++.|++|.|
T Consensus 421 g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~L 500 (810)
T 3now_A 421 ASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITTAL 500 (810)
T ss_dssp HHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHH
T ss_conf 64999999967998189999999999985796021212899999987642476556433177779999999988599999
Q ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHH---HHHHHHHHHHHCCCHHHHHHHH--
Q ss_conf 99961523579999999999999997449998752234543488999421224---9999999998413801268999--
Q 004572 467 IKFLKDAHNLCDAKAQKDGAEVLLAILSQSRDEMPLFHKDEICTFALFLDSEI---MEEALEIIEVLSHQQNYASELV-- 541 (744)
Q Consensus 467 v~lL~~~~~~~d~~~q~~A~~~Ll~L~~~~~nk~~i~~~Gai~~Lv~lL~s~~---~e~Al~~L~~Ls~~~~~k~~I~-- 541 (744)
+.+|++ +++.+|+.|+++|.|++.+..++..+++.|++++|+.+|.++. .+.|+++|.+|+...+....+.
T Consensus 501 V~LL~s----~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~ 576 (810)
T 3now_A 501 CALAKT----ESHNSQELIARVLNAVCGLKELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSGQ 576 (810)
T ss_dssp HHHHTC----CCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTTTH
T ss_pred HHHHCC----CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCH
T ss_conf 999859----9989999999999998589889999998789999999970598889999999999996589856653100
Q ss_pred -HCCCCHHHHCCCCCC-CHHHHHHHHHHHHHHCCC-CCHHHHHHHCCCCHHHHHHHCC--CCHHHHHHHHHHHHC-CHHH
Q ss_conf -549841131012258-998999999999983379-6139999751893768997049--617999999999825-9988
Q 004572 542 -ASGIIPSIIKFLDTG-TRESRELAIKILCNLSSG-DNIVYHILYLDCTSKLVRLLED--PILSSYCIKIIKALC-TSEA 615 (744)
Q Consensus 542 -~~g~Ip~Lv~lL~s~-~~~~k~~A~~aL~nLs~~-~~n~~~iv~~G~I~~Lv~lL~~--~~l~~~al~iL~nLa-~~e~ 615 (744)
..|++|+|+++|.++ +...+..|++||.||+.. ++++..++++|++|.|+.+|.+ ..+...|+++|+||+ +++.
T Consensus 577 ~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~~~~~ 656 (810)
T 3now_A 577 RSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVMSEDV 656 (810)
T ss_dssp HHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTTSHHH
T ss_pred HHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH
T ss_conf 23157999999867898278899999999998469989999999868889999998289999999999999999679599
Q ss_pred HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH-CCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 9999941994999999872899999999999999981189898899985-994999999830699789999999999933
Q 004572 616 RAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANT-ESIIQCVVDISVNGNSRGKETAKELIMLLD 694 (744)
Q Consensus 616 ~~~i~~~~g~I~~Lv~lL~~~s~~~~e~A~~iL~~Lc~~~~~~~~~v~~-~G~i~~Lv~L~~~~s~~~k~~A~~lL~~l~ 694 (744)
+..++...|+++.|+.++.+.+..+|+.|+++|.+|+.++....+.+.+ .|+++.|+.++.+++.++++.|+++|..+.
T Consensus 657 ~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~ 736 (810)
T 3now_A 657 IKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMI 736 (810)
T ss_dssp HHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 99998616808999998469998999999999999867998999999987488989999877998899999999999998
Q ss_pred HC
Q ss_conf 01
Q 004572 695 HC 696 (744)
Q Consensus 695 ~~ 696 (744)
..
T Consensus 737 ~~ 738 (810)
T 3now_A 737 NA 738 (810)
T ss_dssp TT
T ss_pred HC
T ss_conf 69
No 8
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=1.00 E-value=1 Score=225.48 Aligned_cols=277 Identities=11% Similarity=0.071 Sum_probs=185.2
Q ss_pred CCCHHHHHHHCC------------CCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCH----------HHHHHHHCCCCCC
Q ss_conf 882889985139------------998999999999999761050022778607972----------8799996152357
Q 004572 419 GTDLTSLSKLAS------------RPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYV----------KPLIKFLKDAHNL 476 (744)
Q Consensus 419 ~~~~~ll~~L~s------------~~~e~q~~Al~~Lr~Lak~~~~~r~~i~~~G~I----------~~Lv~lL~~~~~~ 476 (744)
+.+|.|++.|.. ++.+.|.+|+++|.+++...++......+.|++ +.+++++.+.+..
T Consensus 70 g~~p~lv~~l~~~~~~~~~~~~~~~~~~~~~~a~~al~ni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 149 (458)
T 3nmz_A 70 GCLPLLIQLLHGNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETCWEWQEAHEPG 149 (458)
T ss_dssp TCHHHHHHHHTCTTCCSCC---CCCCHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSS
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 88899999983335332344666577999999999999988069503489999999999987664417999999702135
Q ss_pred CC----H------HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC--------------HHHHHHHHHHHHHCC
Q ss_conf 99----9------99999999999974499987522345434889994212--------------249999999998413
Q 004572 477 CD----A------KAQKDGAEVLLAILSQSRDEMPLFHKDEICTFALFLDS--------------EIMEEALEIIEVLSH 532 (744)
Q Consensus 477 ~d----~------~~q~~A~~~Ll~L~~~~~nk~~i~~~Gai~~Lv~lL~s--------------~~~e~Al~~L~~Ls~ 532 (744)
.+ + ..+.+|+++|.|++.++++|..+++.|++++|+.+|.. ....+|+++|.||+.
T Consensus 150 ~~~~~~~~~~~~~~~~~qAv~aL~nls~~~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~ 229 (458)
T 3nmz_A 150 MDQDKNPMPAPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTF 229 (458)
T ss_dssp SCCCSCC--CCCTTTTHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 33246776420247789999999996599899999998898899999986530012335678999999999999999867
Q ss_pred CHH-HHHHHHH-CCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCC--CCHHHHHHHCCCCHHHHHHH-C--CCCHHHHHHH
Q ss_conf 801-2689995-49841131012258998999999999983379--61399997518937689970-4--9617999999
Q 004572 533 QQN-YASELVA-SGIIPSIIKFLDTGTRESRELAIKILCNLSSG--DNIVYHILYLDCTSKLVRLL-E--DPILSSYCIK 605 (744)
Q Consensus 533 ~~~-~k~~I~~-~g~Ip~Lv~lL~s~~~~~k~~A~~aL~nLs~~--~~n~~~iv~~G~I~~Lv~lL-~--~~~l~~~al~ 605 (744)
.++ ++..+.. .|+||+|+.+|++++.++++.|+++|.||+.. ++|+..++++|+||+|+.+| . +..+.+.++.
T Consensus 230 ~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~ 309 (458)
T 3nmz_A 230 GDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLS 309 (458)
T ss_dssp TCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHH
T ss_pred CCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 99624789998179299999999489999999999999998647988999999986998999999855899999999999
Q ss_pred HHHHHC--CHHHHHHHHHHCCCHHHHHHHHCCCCH----HHHHHHHHHHHHHHC---CCHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 999825--998899999419949999998728999----999999999999811---89898899985994999999830
Q 004572 606 IIKALC--TSEARAAVAESNPCIDSIAKLLETGTR----EEQEHIVDVLLSLCH---EHTKYCQLANTESIIQCVVDISV 676 (744)
Q Consensus 606 iL~nLa--~~e~~~~i~~~~g~I~~Lv~lL~~~s~----~~~e~A~~iL~~Lc~---~~~~~~~~v~~~G~i~~Lv~L~~ 676 (744)
+|+||+ +++++..|+...|+|+.|+++|.++++ .++++|+++|.+|+. .+...++.+.+.|+++.|+.++.
T Consensus 310 aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~ 389 (458)
T 3nmz_A 310 ALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLK 389 (458)
T ss_dssp HHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSS
T ss_pred HHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHC
T ss_conf 99998048877899999862849999999627897341999999999999998623699899999997064999999980
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q ss_conf 6997899999999999330
Q 004572 677 NGNSRGKETAKELIMLLDH 695 (744)
Q Consensus 677 ~~s~~~k~~A~~lL~~l~~ 695 (744)
+++..+++.|+.+|+.+..
T Consensus 390 ~~~~~v~~~A~~aL~nLa~ 408 (458)
T 3nmz_A 390 SHSLTIVSNACGTLWNLSA 408 (458)
T ss_dssp CSCHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHHC
T ss_conf 7985789999999999972
No 9
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=1.00 E-value=1 Score=223.42 Aligned_cols=270 Identities=13% Similarity=0.136 Sum_probs=216.3
Q ss_pred CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH-CCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 8828899851399989999999999997610-500227786079728799996152357999999999999999744999
Q 004572 419 GTDLTSLSKLASRPWGSQCDAVENIKKLLKD-NGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAILSQSR 497 (744)
Q Consensus 419 ~~~~~ll~~L~s~~~e~q~~Al~~Lr~Lak~-~~~~r~~i~~~G~I~~Lv~lL~~~~~~~d~~~q~~A~~~Ll~L~~~~~ 497 (744)
+.++.|+..|.+.+.++|..|+++|++++.. +.++|..|++.|+||+||++|++. .+..++++++.+|++|+.++.
T Consensus 90 G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV~LL~s~---~~~~~~e~aa~aL~nLS~~~~ 166 (584)
T 3l6x_A 90 KGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKA---RDMDLTEVITGTLWNLSSHDS 166 (584)
T ss_dssp THHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHC---CSHHHHHHHHHHHHHHTTSGG
T ss_pred CCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCC---CCHHHHHHHHHHHHHHHCCCH
T ss_conf 99079999877999899999999999987359889999999858999999997679---999999999999999857961
Q ss_pred CCCCCCCCCCHHHHHHHHC---------------------CHHHHHHHHHHHHHCCCHHH-HHHHHHC-CCCHHHHCCCC
Q ss_conf 8752234543488999421---------------------22499999999984138012-6899954-98411310122
Q 004572 498 DEMPLFHKDEICTFALFLD---------------------SEIMEEALEIIEVLSHQQNY-ASELVAS-GIIPSIIKFLD 554 (744)
Q Consensus 498 nk~~i~~~Gai~~Lv~lL~---------------------s~~~e~Al~~L~~Ls~~~~~-k~~I~~~-g~Ip~Lv~lL~ 554 (744)
++..++. +++++|+.++. ....++|+++|+||+...++ +..|++. |++++|+++|+
T Consensus 167 ~k~~I~~-~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~ 245 (584)
T 3l6x_A 167 IKMEIVD-HALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQ 245 (584)
T ss_dssp GHHHHHH-HTHHHHHHHTHHHHHCCC----------CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHH
T ss_pred HHHHHHH-CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 3689986-308999999831334543343321112455549999999999999963887889999984895899999998
Q ss_pred C--------------------------------------------------------------------------CCHHH
Q ss_conf 5--------------------------------------------------------------------------89989
Q 004572 555 T--------------------------------------------------------------------------GTRES 560 (744)
Q Consensus 555 s--------------------------------------------------------------------------~~~~~ 560 (744)
+ .+..+
T Consensus 246 ~~~~~~~~~~~~~enav~aL~NLs~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~Gve~L~~~~~v~~Ll~LL~~s~~~~v 325 (584)
T 3l6x_A 246 AEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGTSPARGYELLFQPEVVRIYISLLKESKTPAI 325 (584)
T ss_dssp HHHHTTCCSCHHHHHHHHHHHHHHTTHHHHSTTCCC--------------CCCCGGGGGGSHHHHHHHHHHHHHCCCHHH
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHH
T ss_conf 74013674388999999999986423210145245554302433445311472117888160079999999714787889
Q ss_pred HHHHHHHHHHHCCCC-----CHHHHHHHCCCCHHHHHHHCC--CCHHHHHHHHHHHHC-CHHHHHHHHHHCCCHHHHHHH
Q ss_conf 999999999833796-----139999751893768997049--617999999999825-998899999419949999998
Q 004572 561 RELAIKILCNLSSGD-----NIVYHILYLDCTSKLVRLLED--PILSSYCIKIIKALC-TSEARAAVAESNPCIDSIAKL 632 (744)
Q Consensus 561 k~~A~~aL~nLs~~~-----~n~~~iv~~G~I~~Lv~lL~~--~~l~~~al~iL~nLa-~~e~~~~i~~~~g~I~~Lv~l 632 (744)
+++|++||.||+... .++..+.+.|++|.|+.+|.. ..+...++++|.||+ ++.++..| . .|+|+.||.+
T Consensus 326 ~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL~s~~~~v~~~A~~aL~nLs~~~~~~~~I-~-~g~ip~LV~L 403 (584)
T 3l6x_A 326 LEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELI-G-KHAIPNLVKN 403 (584)
T ss_dssp HHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCSCHHHH-H-HHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH-H-HCCHHHHHHH
T ss_conf 9999999999872886453899999998376999999984898799999999999983782379999-8-0888999998
Q ss_pred HCCC--------CHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCC--CHHHHHHHHHHHHHHH
Q ss_conf 7289--------999999999999998118989889998599499999983069--9789999999999933
Q 004572 633 LETG--------TREEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNG--NSRGKETAKELIMLLD 694 (744)
Q Consensus 633 L~~~--------s~~~~e~A~~iL~~Lc~~~~~~~~~v~~~G~i~~Lv~L~~~~--s~~~k~~A~~lL~~l~ 694 (744)
|.++ +..++..|+++|.+|+..+....+.+.+.|+++.|+.++.++ .+++++.|+.+|..|.
T Consensus 404 L~~~~~~~~~~~s~~v~~~a~~tL~NL~a~~~~~~~~I~~~g~I~~Lv~LL~s~~~~~~v~k~Aa~vL~nl~ 475 (584)
T 3l6x_A 404 LPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIW 475 (584)
T ss_dssp SSSSSCSGGGTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTCSSSCHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 467755544310099999999999998638989999999789869999997478987689999999999998
No 10
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=1.00 E-value=1 Score=220.45 Aligned_cols=274 Identities=14% Similarity=0.148 Sum_probs=158.1
Q ss_pred CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCC-CCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 88288998513999899999999999976105002277860797287999961523-57999999999999999744999
Q 004572 419 GTDLTSLSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAH-NLCDAKAQKDGAEVLLAILSQSR 497 (744)
Q Consensus 419 ~~~~~ll~~L~s~~~e~q~~Al~~Lr~Lak~~~~~r~~i~~~G~I~~Lv~lL~~~~-~~~d~~~q~~A~~~Ll~L~~~~~ 497 (744)
+.++.++..|.+.+.++|..|+++|.+++.+++.+|..+.+.|++++|+.+|.+.. .......+++++++|.+++.+..
T Consensus 143 GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~ 222 (510)
T 3ul1_B 143 GAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKN 222 (510)
T ss_dssp THHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHHCCCS
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 87999999886999899999999999997188999999998698179999997346104459999999999998753111
Q ss_pred CCCCCC-CCCCHHHHHHHHCCHH---HHHHHHHHHHHCCCHHH-HHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 875223-4543488999421224---99999999984138012-689995498411310122589989999999999833
Q 004572 498 DEMPLF-HKDEICTFALFLDSEI---MEEALEIIEVLSHQQNY-ASELVASGIIPSIIKFLDTGTRESRELAIKILCNLS 572 (744)
Q Consensus 498 nk~~i~-~~Gai~~Lv~lL~s~~---~e~Al~~L~~Ls~~~~~-k~~I~~~g~Ip~Lv~lL~s~~~~~k~~A~~aL~nLs 572 (744)
....+. ..|+++.|+.+|.++. ...|+++|.+|+....+ ...+...|++|.|+.+|.+++..++..|+.+|.|++
T Consensus 223 ~~~~~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~ 302 (510)
T 3ul1_B 223 PAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIV 302 (510)
T ss_dssp SCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 02579999769999999981687999999999999986021566789986365125556613887134268899998862
Q ss_pred CCC-CHHHHHHHCCCCHHHHHHHCCC--CHHHHHHHHHHHHC--CHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 796-1399997518937689970496--17999999999825--998899999419949999998728999999999999
Q 004572 573 SGD-NIVYHILYLDCTSKLVRLLEDP--ILSSYCIKIIKALC--TSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDV 647 (744)
Q Consensus 573 ~~~-~n~~~iv~~G~I~~Lv~lL~~~--~l~~~al~iL~nLa--~~e~~~~i~~~~g~I~~Lv~lL~~~s~~~~e~A~~i 647 (744)
... .++..+++.|+++.|+.+|.++ .++..|+++|.||+ .++.+..+.+ .|+++.|+.++.+++..++..|+++
T Consensus 303 ~~~~~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~-~g~i~~Lv~lL~~~~~~v~~~Aa~a 381 (510)
T 3ul1_B 303 TGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVN-HGLVPFLVGVLSKADFKTQKEAAWA 381 (510)
T ss_dssp TSCHHHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHH-TTHHHHHHHHHHSSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH-CCCHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 377888888761241278888724998899999999999997084989999885-3878899999738988999999999
Q ss_pred HHHHHCC-CHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 9998118-989889998599499999983069978999999999993
Q 004572 648 LLSLCHE-HTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLL 693 (744)
Q Consensus 648 L~~Lc~~-~~~~~~~v~~~G~i~~Lv~L~~~~s~~~k~~A~~lL~~l 693 (744)
|.+++.+ +.+....+.+.|++++|+.++...++++...+..+|..+
T Consensus 382 L~Nl~~~~~~~~~~~L~~~g~i~~L~~LL~~~d~~i~~~~L~aL~ni 428 (510)
T 3ul1_B 382 ITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNI 428 (510)
T ss_dssp HHHHHHHCCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 99987069999999999797899999986699999999999999999
Done!