Query 004574
Match_columns 744
No_of_seqs 313 out of 3939
Neff 10.3
Searched_HMMs 29240
Date Tue Mar 26 17:58:27 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004574.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1877-1881//hhsearch_pdb/004574hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 1.0 1 1 465.8 52.0 608 5-740 36-732 (740)
2 2ecf_A Dipeptidyl peptidase IV 1.0 1 1 444.3 55.1 615 32-735 38-741 (741)
3 1xfd_A DIP, dipeptidyl aminope 1.0 1 1 436.8 46.3 605 5-734 37-722 (723)
4 1z68_A Fibroblast activation p 1.0 1 1 428.3 49.4 598 5-734 36-719 (719)
5 2z3z_A Dipeptidyl aminopeptida 1.0 1 1 427.1 55.7 582 6-733 45-706 (706)
6 3azo_A Aminopeptidase; POP fam 1.0 1 1 418.4 60.3 578 30-738 23-653 (662)
7 3o4h_A Acylamino-acid-releasin 1.0 1 1 415.8 48.8 539 32-735 23-581 (582)
8 2bkl_A Prolyl endopeptidase; m 1.0 1 1 411.0 55.6 581 34-742 71-684 (695)
9 2xdw_A Prolyl endopeptidase; a 1.0 1 1 407.3 56.6 578 32-736 75-707 (710)
10 1yr2_A Prolyl oligopeptidase; 1.0 1 1 400.6 53.1 576 35-739 111-723 (741)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=1.00 E-value=1 Score=465.82 Aligned_cols=608 Identities=13% Similarity=0.065 Sum_probs=418.4
Q ss_pred CCEEEEECCCCCCCCCCEEEECCCCCC--CCCC--EEECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEECCCCC
Q ss_conf 311674239999999921330389987--3352--243679874899641254445678952599997798860104469
Q 004574 5 TGIGIHRLLPDDSLGPEKEVHGYPDGA--KINF--VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES 80 (744)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~--~~~~--p~~SpDG~~iaf~~~~~~~~~~~~~~~~i~~~~~~gg~~~~lt~~ 80 (744)
..|+++++.. |+.+++....... .+.. +.|||||++|||.+.... ....+...++|++|+++|+.++|+..
T Consensus 36 ~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~-~~r~~~~~~~~~~d~~~~~~~~l~~~ 110 (740)
T 4a5s_A 36 NNILVFNAEY----GNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVK-QWRHSYTASYDIYDLNKRQLITEERI 110 (740)
T ss_dssp TEEEEEETTT----CCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEE-CSSSCEEEEEEEEETTTTEECCSSCC
T ss_pred CCEEEEECCC----CCEEEEEECHHHHHHCCCCCCEEECCCCCEEEEEECCEE-EEEECCCEEEEEEECCCCCEEECCCC
T ss_conf 9389998789----965799820142231365663699898887999979851-57970450799998889957883368
Q ss_pred CCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEE
Q ss_conf 99400241132288329708999933999999987778999905433787510122121347892001000123011799
Q 004574 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (744)
Q Consensus 81 ~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 160 (744)
.. .+..+.|||||+.|+|... .+||
T Consensus 111 ~~-----~~~~~~~SPdG~~la~~~~--------------------------------------------------~~i~ 135 (740)
T 4a5s_A 111 PN-----NTQWVTWSPVGHKLAYVWN--------------------------------------------------NDIY 135 (740)
T ss_dssp CT-----TEEEEEECSSTTCEEEEET--------------------------------------------------TEEE
T ss_pred CC-----CCEEEEECCCCCEEEEEEC--------------------------------------------------CEEE
T ss_conf 87-----4264289999998999989--------------------------------------------------9699
Q ss_pred EECC-CCCEEECCCCCE---E-----------------EEECCCCCCCEEEEEEEECCCCCCC-----------------
Q ss_conf 9858-997045289841---5-----------------5301089986699998107743323-----------------
Q 004574 161 LGSL-DGTAKDFGTPAV---Y-----------------TAVEPSPDQKYVLITSMHRPYSYKV----------------- 202 (744)
Q Consensus 161 ~~~~-~G~~~~l~~~~~---~-----------------~~~~~SpDG~~i~~~~~~~~~~~~~----------------- 202 (744)
++++ +|+.++|+..+. + ..+.|||||++|+|.+.+......-
T Consensus 136 ~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~ 215 (740)
T 4a5s_A 136 VKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVR 215 (740)
T ss_dssp EESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEE
T ss_pred EEECCCCCEEEECCCCCCCCEECCCCCCCCCCHHCCCCCCEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCEE
T ss_conf 99779996699857998661666762321140222777635998999989999985667952787764587778985336
Q ss_pred ----CCCCC--CCEEEEEECCC---C---EEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCC
Q ss_conf ----56788--50089990799---7---011203789888887556885578985311038996399998213899876
Q 004574 203 ----PCARF--SQKVQVWTTDG---K---LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANV 270 (744)
Q Consensus 203 ----~~~~~--~~~i~~~~~~g---~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spDg~~~l~~~~~~~~~~~~~ 270 (744)
..+.. ..+|+++++++ + ..+++..... +......+..++|||||+. +++...+..
T Consensus 216 ~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~~~~wspdg~~-~~~~~~r~~----- 282 (740)
T 4a5s_A 216 VPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS-------MLIGDHYLCDVTWATQERI-SLQWLRRIQ----- 282 (740)
T ss_dssp EECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH-------HHTSCEEEEEEEEEETTEE-EEEEEESST-----
T ss_pred ECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCC-------CCCCCEEEEEEEEECCCEE-EEEEECCCC-----
T ss_conf 047999593886389999897777778623899538866-------7778749988899379969-999957788-----
Q ss_pred CCCCCCEEEECCCCCCCCCC-------CEEEEEE--CCC-----EECEEECCCCCEEEEEEEEECCCEEEEEECCCCCCC
Q ss_conf 67866618952599999999-------6186540--542-----100256159951788654112552499974999998
Q 004574 271 EVSPRDIIYTQPAEPAEGEK-------PEILHKL--DLR-----FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV 336 (744)
Q Consensus 271 ~~~~~~~i~~~~~~~~~~~~-------~~~l~~~--~~~-----~~~~~~SpDg~~l~~~~~~~~~~~~l~~~~~~~~~~ 336 (744)
....|+++++ ++++ ...+... ... ...++|||||+.|++....+++..+||++++++ +
T Consensus 283 ---~~~~i~~~d~---~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~--~ 354 (740)
T 4a5s_A 283 ---NYSVMDICDY---DESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDK--K 354 (740)
T ss_dssp ---TEEEEEEEEE---ETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTC--S
T ss_pred ---CEEEEEEEEC---CCCCCCCCEEEEEEEEECCCCCEECCCCCCCCEECCCCCEEEEEEECCCCCEEEEEEECCC--C
T ss_conf ---8799999978---8886543205778864135896495676777258699987999997689813899997899--9
Q ss_pred CCEEEECCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEE-EEEECCC
Q ss_conf 634510045555469999986450889986899863228863199981478888999761799966899656-8730341
Q 004574 337 APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE-RIWESNR 415 (744)
Q Consensus 337 ~~~~l~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~-~l~~~~~ 415 (744)
..+++|.+...- . ..+++|++.|+|.+.+. .....+.+||.+++.++..+ .|+..-.
T Consensus 355 ~~~~lT~g~~~v------~--~~~~~d~~~i~f~~~~~--------------~~~~~~~~ly~v~~~g~~~~~~lt~~~~ 412 (740)
T 4a5s_A 355 DCTFITKGTWEV------I--GIEALTSDYLYYISNEY--------------KGMPGGRNLYKIQLIDYTKVTCLSCELN 412 (740)
T ss_dssp SCEESCCSSSCE------E--EEEEECSSEEEEEESCG--------------GGCTTCBEEEEEETTEEEEEEESSTTTS
T ss_pred CEEECCCCCEEE------E--EEEEEECCEEEEEEECC--------------CCCCCEEEEEEEECCCCCCCEEECCCCC
T ss_conf 467233088799------8--87799389899999358--------------8997604899997789985236615667
Q ss_pred HHHHHHEEEEECCCCCEECCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCC----CCCCCCCCEEEEEEECCC
Q ss_conf 0222301342138862001347889999993688886599997899952464228999----999678750899998479
Q 004574 416 EKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP----YPTLASLQKEMIKYQRKD 491 (744)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~~~~~~~~~~lt~~~~~----~~~~~~~~~~~i~~~~~~ 491 (744)
. . ......++||||++.+++..++.. ++.+++++..+++..+++..+.. .........+.+.+ ..+
T Consensus 413 ~---~-----~~~~~~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~d 482 (740)
T 4a5s_A 413 P---E-----RCQYYSVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFI-ILN 482 (740)
T ss_dssp T---T-----TBCBEEEEECTTSSEEEEEECSBS-SCEEEEEETTTTEEEEEEECCHHHHHHHTTEECCEEEEEEE-EET
T ss_pred C---C-----CCCEEEEEECCCCCEEEEEECCCC-CCEEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEE-CCC
T ss_conf 7---7-----885599998999889999967899-98799998899958899605765666654036885179999-459
Q ss_pred CEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HCCEEEEECCCCCCCCCC
Q ss_conf 9089999991899999999993099998799874656578435898866789932589998-588199966998877899
Q 004574 492 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEG 570 (744)
Q Consensus 492 g~~l~~~~~~P~~~~~~~~~~~p~vi~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gy~v~~~~~~~~~g~g 570 (744)
|..+++++++|+++++.+ ++|+||++||++..... ...+.......++ ++||+|+.++.++..+.+
T Consensus 483 g~~l~~~~~~P~~~~~~~--~~P~vv~~HGg~~~~~~-----------~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g 549 (740)
T 4a5s_A 483 ETKFWYQMILPPHFDKSK--KYPLLLDVYAGPCSQKA-----------DTVFRLNWATYLASTENIIVASFDGRGSGYQG 549 (740)
T ss_dssp TEEEEEEEEECTTCCTTS--CEEEEEECCCCTTCCCC-----------CCCCCCSHHHHHHHTTCCEEEEECCTTCSSSC
T ss_pred CEEEEEEEEECCCCCCCC--CCCEEEEECCCCCCCCC-----------CCCCCCCHHHHHHHCCCEEEEEECCCCCCCCC
T ss_conf 959999999699988889--84589997799853002-----------54667578999874599699997679988677
Q ss_pred CC-----------CHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 98-----------8077899999999984998998279999265799999999959991139997258889988877631
Q 004574 571 DK-----------LPNDSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ 639 (744)
Q Consensus 571 ~~-----------~~~~d~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~ 639 (744)
.. ...+|+.++++++.+++.+|++||+|+|+||||++|+.++.++|++|+++++++|+.++......+.
T Consensus 550 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~ 629 (740)
T 4a5s_A 550 DKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYT 629 (740)
T ss_dssp HHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH
T ss_conf 12788787661865389999999999866776876189998878999999999739994169999178543177666778
Q ss_pred CC-CCC--HHHCHHHHHHCCCCCCCCCCCC-CEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
Q ss_conf 11-144--0011788985490110378999-8999960999977899799999999999499948999908999326754
Q 004574 640 TE-FRT--LWEATNVYIEMSPITHANKIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR 715 (744)
Q Consensus 640 ~~-~~~--~~~~~~~~~~~~~~~~~~~i~~-P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 715 (744)
.. ... .+..++.+...++...+.++++ |+|++||+.|..|+ +.++.+++++|+..+++++++++|+++|.+...
T Consensus 630 ~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~--~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~ 707 (740)
T 4a5s_A 630 ERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVH--FQQSAQISKALVDVGVDFQAMWYTDEDHGIASS 707 (740)
T ss_dssp HHHHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCTTCCSH
T ss_pred HHHCCCCCCCCCHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCCC--HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
T ss_conf 987499974325788886898899960789868999729999329--999999999999879986999989999867878
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 5388999999999999616799999
Q 004574 716 ENVMHVIWETDRWLQKYCLSNTSDG 740 (744)
Q Consensus 716 ~~~~~~~~~~~~fl~~~l~~~~~~~ 740 (744)
+...++++.+.+||+++|+....+.
T Consensus 708 ~~~~~~~~~i~~fl~~~l~~~~~~~ 732 (740)
T 4a5s_A 708 TAHQHIYTHMSHFIKQCFSLPAAAS 732 (740)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC----
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 6599999999999998758988754
No 2
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=1.00 E-value=1 Score=444.32 Aligned_cols=615 Identities=16% Similarity=0.199 Sum_probs=392.5
Q ss_pred CCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCC------------------CC--CCCCC
Q ss_conf 33522436798748996412544456789525999977988601044699940------------------02--41132
Q 004574 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC------------------LN--AVFGS 91 (744)
Q Consensus 32 ~~~~p~~SpDG~~iaf~~~~~~~~~~~~~~~~i~~~~~~gg~~~~lt~~~~~~------------------~~--~~~~~ 91 (744)
.+..++|||||++|||++.. ...+....||++++++++.++++...... .. ..+..
T Consensus 38 ~~~~~~~SpdG~~la~~~~~----d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGK----DSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCEEEEECTTSSEEEEEECC----SSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCEEECCCCEEEEEECC----CCCCCCCEEEEEECCCCCEEECCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCE
T ss_conf 87784483599789999646----78876217999988999646701633324343334510234444442214567420
Q ss_pred EEEECCCCEEEEEECCCCCCCCCCCCCCCC---CEEEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEEEECC-CCC
Q ss_conf 288329708999933999999987778999---9054337875101221213478920010001230117999858-997
Q 004574 92 FVWVNNSTLLIFTIPSSRRDPPKKTMVPLG---PKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT 167 (744)
Q Consensus 92 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~G~ 167 (744)
+.|||||++|++... ..........+ .......... ......++.++..+......+||++++ +|+
T Consensus 114 ~~~SpDg~~l~~~~~----~~i~~~d~~~~~~~~~~~l~~~~~------~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG----GELYLYDLKQEGKAAVRQLTHGEG------FATDAKLSPKGGFVSFIRGRNLWVIDLASGR 183 (741)
T ss_dssp CEECTTSSEEEEEET----TEEEEEESSSCSTTSCCBCCCSSS------CEEEEEECTTSSEEEEEETTEEEEEETTTTE
T ss_pred EEECCCCCEEEEEEC----CCEEEEECCCCCCCEEEECCCCCC------CCCCCCCCCCCCEEEEEECCCEEEEECCCCC
T ss_conf 699787898999948----959999878887534788036876------3236508899997999968958998569997
Q ss_pred EEECCCC-CE-----------------EEEECCCCCCCEEEEEEEECCCCCC---------------C--C-CCC--CCC
Q ss_conf 0452898-41-----------------5530108998669999810774332---------------3--5-678--850
Q 004574 168 AKDFGTP-AV-----------------YTAVEPSPDQKYVLITSMHRPYSYK---------------V--P-CAR--FSQ 209 (744)
Q Consensus 168 ~~~l~~~-~~-----------------~~~~~~SpDG~~i~~~~~~~~~~~~---------------~--~-~~~--~~~ 209 (744)
..+++.. .. ...+.|||||++|++.+........ . + .+. ...
T Consensus 184 ~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~ 263 (741)
T 2ecf_A 184 QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQV 263 (741)
T ss_dssp EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEE
T ss_pred EEEECCCCCCCEECCCCCEEEEECCCCCCCEEECCCCCEEEEEEECCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCEE
T ss_conf 79842279644222455403320036666448999998899999857787147557888886642576469998978726
Q ss_pred EEEEEECCC-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 089990799-7011203789888887556885578985311038996399998213899876678666189525999999
Q 004574 210 KVQVWTTDG-KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG 288 (744)
Q Consensus 210 ~i~~~~~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spDg~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 288 (744)
.|+++++++ +..+.+...... ...+..+.| |||+. |++....... ....|++++. .+
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~----------~~~~~~~~~-pDg~~-l~~~~~~~~~-------~~~~i~~~d~---~~ 321 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQ----------DIYLARVNW-RDPQH-LSFQRQSRDQ-------KKLDLVEVTL---AS 321 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCS----------SEEEEEEEE-EETTE-EEEEEEETTS-------SEEEEEEEET---TT
T ss_pred EEEEEECCCCCCEEEECCCCCC----------CEEEEEEEE-CCCCE-EEEEEECCCC-------CEEEEEEEEC---CC
T ss_conf 9999989888822896579876----------468998885-79997-9999934668-------7679999977---77
Q ss_pred CCCEEEEEECC-----CEECEEECCCCCEEEEEEEEECCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCC
Q ss_conf 99618654054-----2100256159951788654112552499974999998634510045555469999986450889
Q 004574 289 EKPEILHKLDL-----RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTST 363 (744)
Q Consensus 289 ~~~~~l~~~~~-----~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spd 363 (744)
++...+..... .+..++|||||+ +++.+ ..++..+||.+++++ . .+.++..... +. ....||||
T Consensus 322 g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~-~~~g~~~l~~~~~~~--~-~~~l~~~~~~-v~-----~~~~~s~d 390 (741)
T 2ecf_A 322 NQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSS-ERTGFQHLYRIDSKG--K-AAALTHGNWS-VD-----ELLAVDEK 390 (741)
T ss_dssp CCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEE-CTTSSCEEEEECSSS--C-EEESCCSSSC-EE-----EEEEEETT
T ss_pred CCEEEEEECCCCCCCCCCCCEEECCCCE-EEEEE-CCCCCCEEEEECCCC--C-EEEEEECCEE-EE-----EEEEEECC
T ss_conf 9068999727987188577527879983-99986-578930799996899--8-5664226617-87-----67678279
Q ss_pred CCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHEEEEECCCCCEECCCCCCEEEE
Q ss_conf 98689986322886319998147888899976179996689965687303410222301342138862001347889999
Q 004574 364 GTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILT 443 (744)
Q Consensus 364 g~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~ 443 (744)
|+.|++..... .....+||.++..++..++|.... . +. .++||||++.+++
T Consensus 391 g~~l~~~~~~~----------------~~~~~~l~~~~~~g~~~~~l~~~~-~-----~~-------~~~~spdg~~l~~ 441 (741)
T 2ecf_A 391 AGLAYFRAGIE----------------SARESQIYAVPLQGGQPQRLSKAP-G-----MH-------SASFARNASVYVD 441 (741)
T ss_dssp TTEEEEEECSS----------------CTTCBEEEEEETTCCCCEECCCSC-S-----EE-------EEEECTTSSEEEE
T ss_pred CCEEEEEEECC----------------CCCEEEEEEEECCCCCEEECCCCC-C-----CE-------EEEECCCCCEEEE
T ss_conf 98899998679----------------986589999976999736543688-7-----14-------7999899998999
Q ss_pred EEECCCCCCEEEEEECCCCCEEEEECCCC-----CCCCC--CCCCEEEEEEECCCC-EEEEEEEEECCCCCCCCCCCCEE
Q ss_conf 99368888659999789995246422899-----99996--787508999984799-08999999189999999999309
Q 004574 444 SKESKTEITQYHILSWPLKKSSQITNFPH-----PYPTL--ASLQKEMIKYQRKDG-VPLTATLYLPPGYDQSKDGPLPC 515 (744)
Q Consensus 444 ~~~~~~~~~~i~~~~~~~~~~~~lt~~~~-----~~~~~--~~~~~~~i~~~~~~g-~~l~~~~~~P~~~~~~~~~~~p~ 515 (744)
..++...|+++++++.+++..+.++..+. ..... .....+.+.+...+| ..+++.++.|++++++ ++.|+
T Consensus 442 ~~~~~~~p~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~P~~~~~~--~~~p~ 519 (741)
T 2ecf_A 442 SWSNNSTPPQIELFRANGEKIATLVENDLADPKHPYARYREAQRPVEFGTLTAADGKTPLNYSVIKPAGFDPA--KRYPV 519 (741)
T ss_dssp EEEETTEEEEEEEEETTSCEEECSSCCCSSSTTSTTHHHHTTCCCEEEEEEECTTSSCEEEEEEECCSSCCTT--SCEEE
T ss_pred EECCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCC--CCCCE
T ss_conf 9557999976999976997078832375433331023453047973799997589978878999958998988--98678
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHCCEEEEECCCCCCCCCCCC-----------CHHHHHHHHHH
Q ss_conf 999879987465657843589886678993-258999858819996699887789998-----------80778999999
Q 004574 516 LFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLARRFAVLAGPSIPIIGEGDK-----------LPNDSAEAAVE 583 (744)
Q Consensus 516 vi~~HG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~Gy~v~~~~~~~~~g~g~~-----------~~~~d~~~~~~ 583 (744)
||++||++..... ...|..... ..+..|+++||.|+..+.++..+.+.. ...+|+.++++
T Consensus 520 vv~~hG~~~~~~~--------~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~ 591 (741)
T 2ecf_A 520 AVYVYGGPASQTV--------TDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVA 591 (741)
T ss_dssp EEECCCSTTCCSC--------SSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHH
T ss_pred EEEECCCCCCCCC--------CCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 9997489875555--------43345551247999998699789999258989887015677764114321788999999
Q ss_pred HHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC-CCCCHHHCHHHHHHCCCCCCCC
Q ss_conf 999849989982799992657999999999599911399972588899888776311-1144001178898549011037
Q 004574 584 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQT-EFRTLWEATNVYIEMSPITHAN 662 (744)
Q Consensus 584 ~l~~~~~id~~~i~i~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 662 (744)
++.++..+|..+++++||||||++|+.++.++|++++++|+.+|+.++......+.. ....++...+.+...++...+.
T Consensus 592 ~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (741)
T 2ecf_A 592 WLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDSHYTERYMDLPARNDAGYREARVLTHIE 671 (741)
T ss_dssp HHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGSBHHHHHHHHCCTGGGHHHHHHHCSGGGGG
T ss_pred HHHHCCCCCHHHEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCHHHCCCCCCCHHHHHHCCHHHHHH
T ss_conf 99866787823389999896999999999868973389998678756245111153533388655845643269878885
Q ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 8999899996099997789979999999999949994899990899932675453889999999999996167
Q 004574 663 KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 735 (744)
Q Consensus 663 ~i~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 735 (744)
++++|+|++||+.|..++ ..++++++++++..+.+++++++++++|.+.... ..++++.+.+||+++|+.
T Consensus 672 ~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~i~~fl~~~l~~ 741 (741)
T 2ecf_A 672 GLRSPLLLIHGMADDNVL--FTNSTSLMSALQKRGQPFELMTYPGAKHGLSGAD-ALHRYRVAEAFLGRCLKP 741 (741)
T ss_dssp GCCSCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHH-HHHHHHHHHHHHHHHHCC
T ss_pred HCCCCEEEECCCCCCCCC--HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC-HHHHHHHHHHHHHHHCCC
T ss_conf 179988999138988879--8999999999997799559999798997777774-468999999999986399
No 3
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=1.00 E-value=1 Score=436.84 Aligned_cols=605 Identities=13% Similarity=0.059 Sum_probs=398.2
Q ss_pred CCEEEEECCCCCCCCCCEEEECCCCCC--CCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEECCCCCCC
Q ss_conf 311674239999999921330389987--335224367987489964125444567895259999779886010446999
Q 004574 5 TGIGIHRLLPDDSLGPEKEVHGYPDGA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (744)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~--~~~~p~~SpDG~~iaf~~~~~~~~~~~~~~~~i~~~~~~gg~~~~lt~~~~ 82 (744)
..|+++++.+ |+.+++....... .+..+.|||||++|||...... ....+...+||++++++++.++++....
T Consensus 37 g~i~~~d~~~----g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~-~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 111 (723)
T 1xfd_A 37 GTVRLWNVET----NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEP-IYQHSYTGYYVLSKIPHGDPQSLDPPEV 111 (723)
T ss_dssp SCEEEBCGGG----CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCC-CSSSCCCSEEEEEESSSCCCEECCCTTC
T ss_pred CCEEEEECCC----CCEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCC-CEEECCEEEEEEEECCCCCEEECCCCCC
T ss_conf 9889998899----9679976465212233203799898897999945753-1243130359999878995676467765
Q ss_pred CCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEEEE
Q ss_conf 40024113228832970899993399999998777899990543378751012212134789200100012301179998
Q 004574 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (744)
Q Consensus 83 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 162 (744)
. ...+..+.|||||+.|+|.+. .+||++
T Consensus 112 ~--~~~~~~~~~SPdG~~la~~~~--------------------------------------------------~~i~~~ 139 (723)
T 1xfd_A 112 S--NAKLQYAGWGPKGQQLIFIFE--------------------------------------------------NNIYYC 139 (723)
T ss_dssp C--SCCCSBCCBCSSTTCEEEEET--------------------------------------------------TEEEEE
T ss_pred C--CCCCCCCEECCCCCEEEEEEC--------------------------------------------------CEEEEE
T ss_conf 6--652223279999997999989--------------------------------------------------859999
Q ss_pred CC-CCCEEECCCC--CEE------------------EEECCCCCCCEEEEEEEECCCCCCC-------------------
Q ss_conf 58-9970452898--415------------------5301089986699998107743323-------------------
Q 004574 163 SL-DGTAKDFGTP--AVY------------------TAVEPSPDQKYVLITSMHRPYSYKV------------------- 202 (744)
Q Consensus 163 ~~-~G~~~~l~~~--~~~------------------~~~~~SpDG~~i~~~~~~~~~~~~~------------------- 202 (744)
++ +|+..+++.. ..+ ..+.|||||++|+|.+.........
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred ECCCCCEEEEECCCCCCCEECCCCCEEEEEEECCCCCEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCEECCCC
T ss_conf 77989608986089878347763131577873367632899999997999998787651688502587679861040379
Q ss_pred CCC--CCCCEEEEEECCCCEE-EECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCEEE
Q ss_conf 567--8850089990799701-1203789888887556885578985311038996399998213899876678666189
Q 004574 203 PCA--RFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIY 279 (744)
Q Consensus 203 ~~~--~~~~~i~~~~~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~spDg~~~l~~~~~~~~~~~~~~~~~~~~i~ 279 (744)
+.+ .....|++|++.++.. +.+...... ......+..+.|||||+. |++...... ....|+
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~-------~~~~~~~~~~~~SpDg~~-l~~~~~~~~--------~~~~i~ 283 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDP-------RMREYYITMVKWATSTKV-AVTWLNRAQ--------NVSILT 283 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCG-------GGSSEEEEEEEESSSSEE-EEEEEETTS--------CEEEEE
T ss_pred CCCCCCCEEEEEEEECCCCCEEEEEECCCCC-------CCCCCEEEEEEEECCCEE-EEEEECCCC--------CEEEEE
T ss_conf 9979788139999989899545774177667-------876422677787579969-999973788--------958999
Q ss_pred ECCCCCCCCCCCEEEEEE--CCCE----ECEEECCCCCEEEEEEEEECC----CEEEEEEC-CCCCCCC---CEEEECCC
Q ss_conf 525999999996186540--5421----002561599517886541125----52499974-9999986---34510045
Q 004574 280 TQPAEPAEGEKPEILHKL--DLRF----RSVSWCDDSLALVNETWYKTS----QTRTWLVC-PGSKDVA---PRVLFDRV 345 (744)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~--~~~~----~~~~~SpDg~~l~~~~~~~~~----~~~l~~~~-~~~~~~~---~~~l~~~~ 345 (744)
++++ .+++...+... ...+ ..++|||||+.|++.+...++ ..+||+++ ..+ +. .+.++.+.
T Consensus 284 ~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~~~~~l~~~~ 358 (723)
T 1xfd_A 284 LCDA---TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPN--SSNDNIQSITSGD 358 (723)
T ss_dssp EEET---TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCC--SSSCCCCBSCCSS
T ss_pred EEEC---CCCCCEEEEEECCCCEEECCCCCCEECCCCCEEEEEEECCCCCCCCEEEEEEEECCCC--CCCCCEEEEECCC
T ss_conf 9927---9995268877156987916688726868998699998502698765369999963678--8754126764087
Q ss_pred CCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCC-CEEEEEECCCHHHHHHEEE
Q ss_conf 555469999986450889986899863228863199981478888999761799966899-6568730341022230134
Q 004574 346 FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG-SKERIWESNREKYFETAVA 424 (744)
Q Consensus 346 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g-~~~~l~~~~~~~~~~~~~~ 424 (744)
... ...+.|||||+.|++..... .....+||.+++.++ +.+.+...-..
T Consensus 359 ~~~------~~~~~~spdg~~l~~~~~~~----------------~~~~~~l~~~~~~~~~~~~~l~~~~~~-------- 408 (723)
T 1xfd_A 359 WDV------TKILAYDEKGNKIYFLSTED----------------LPRRRQLYSANTVGNFNRQCLSCDLVE-------- 408 (723)
T ss_dssp SCE------EEEEEEETTTTEEEEEESSS----------------CTTCCEEEEECSSTTCCCBCSSTTSSS--------
T ss_pred EEE------EEEEEECCCCCEEEEEECCC----------------CCCCEEEEEEECCCCCCCCEECCCCCC--------
T ss_conf 599------86458837999999998179----------------986228999967898876254255668--------
Q ss_pred EECCCCCEECCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCC----CCCCCCCCEEEEEEECCCCEEEEEEEE
Q ss_conf 2138862001347889999993688886599997899952464228999----999678750899998479908999999
Q 004574 425 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP----YPTLASLQKEMIKYQRKDGVPLTATLY 500 (744)
Q Consensus 425 ~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~~~~~~~~~~lt~~~~~----~~~~~~~~~~~i~~~~~~g~~l~~~~~ 500 (744)
......++||||++.+++..++...|..++ .+...++...+...+.. +........+.+.+...+| +++++++
T Consensus 409 -~~~~~~~~~spdg~~l~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~ 485 (723)
T 1xfd_A 409 -NCTYFSASFSHSMDFFLLKCEGPGVPMVTV-HNTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY-NLPMQIL 485 (723)
T ss_dssp -SCCCCEEEECTTSSEEEEECCSSSSCCEEE-EETTTCCEEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-EECCBEE
T ss_pred -CCCEEEEEECCCCCEEEEECCCCCCCEEEE-EECCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCC-EEEEEEE
T ss_conf -887589998998988999856999984999-9779997789943574666555422589735899981895-1899999
Q ss_pred ECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCC-------C--
Q ss_conf 1899999999993099998799874656578435898866789932589998588199966998877899-------9--
Q 004574 501 LPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG-------D-- 571 (744)
Q Consensus 501 ~P~~~~~~~~~~~p~vi~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gy~v~~~~~~~~~g~g-------~-- 571 (744)
.|++++++ +++|+||++||+++.... ...+. .......++++||+|+.+++++..+.+ .
T Consensus 486 ~P~~~~~~--~~~p~vv~~HG~~~~~~~--------~~~~~--~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~ 553 (723)
T 1xfd_A 486 KPATFTDT--THYPLLLVVDGTPGSQSV--------AEKFE--VSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRR 553 (723)
T ss_dssp BCSSCCSS--SCEEEEEECCCCTTCCCC--------CCCCC--CSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTC
T ss_pred ECCCCCCC--CCCCEEEEECCCCCCCCC--------CCCCC--CCHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHC
T ss_conf 59999878--854789997689975313--------71215--3588887603997999988889731307789888723
Q ss_pred --CCHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHC----CCCEEEEEECCCCCCCCCCCCCCCCC-CCC
Q ss_conf --88077899999999984998998279999265799999999959----99113999725888998887763111-144
Q 004574 572 --KLPNDSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA----PHLFCCGIARSGSYNKTLTPFGFQTE-FRT 644 (744)
Q Consensus 572 --~~~~~d~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~a~~~----p~~~~a~v~~~~~~~~~~~~~~~~~~-~~~ 644 (744)
....+|+.++++++.++..+|.+|++++||||||++|+.++.++ |++|+++++.+|+.++......+... ...
T Consensus 554 ~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 633 (723)
T 1xfd_A 554 LGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGL 633 (723)
T ss_dssp TTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHHHHHHHCC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHCCHHHCCC
T ss_conf 68553899999999997588747115799988879999999997456568983899998668746678630121866399
Q ss_pred HHHCHHHHHHCCCCCCCCCCC-CCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHH
Q ss_conf 001178898549011037899-9899996099997789979999999999949994899990899932675453889999
Q 004574 645 LWEATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIW 723 (744)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~i~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~ 723 (744)
++...+.+...++...+.+++ +|+|++||++|..+| +.++++++++++..+.+++++++++++|.+...+...++++
T Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 711 (723)
T 1xfd_A 634 HGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIH--FQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYR 711 (723)
T ss_dssp CSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHH
T ss_pred CCCCHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCC--HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 6679668776596667750679978999708877748--76799999999987997699998999963114766699999
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999999616
Q 004574 724 ETDRWLQKYCL 734 (744)
Q Consensus 724 ~~~~fl~~~l~ 734 (744)
.+.+||.++|+
T Consensus 712 ~i~~fl~~~l~ 722 (723)
T 1xfd_A 712 SIINFFVECFR 722 (723)
T ss_dssp HHHHHHTTTTC
T ss_pred HHHHHHHHHHC
T ss_conf 99999999754
No 4
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=428.32 Aligned_cols=598 Identities=14% Similarity=0.084 Sum_probs=398.8
Q ss_pred CCEEEEECCCCCCCCCCEEEECCCCC--CCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCE---ECCCC
Q ss_conf 31167423999999992133038998--73352243679874899641254445678952599997798860---10446
Q 004574 5 TGIGIHRLLPDDSLGPEKEVHGYPDG--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA---KPLFE 79 (744)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~--~~~~~p~~SpDG~~iaf~~~~~~~~~~~~~~~~i~~~~~~gg~~---~~lt~ 79 (744)
.+|+++++.+ |+.++++..... ..+..++|||||++|||.+...... ..+....||++++++++. ++++
T Consensus 36 ~~i~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~-~~s~~~~i~~~d~~~g~~~~~~~l~- 109 (719)
T 1z68_A 36 NNIVLYNIET----GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLW-RYSYTATYYIYDLSNGEFVRGNELP- 109 (719)
T ss_dssp SCEEEEESSS----CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECS-SSCEEEEEEEEETTTTEECCSSCCC-
T ss_pred CCEEEEECCC----CCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCEEE-EEECCEEEEEEECCCCCCCCCEECC-
T ss_conf 9789997689----967898735533443302579889888599995571257-7613237999987788414414557-
Q ss_pred CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEE
Q ss_conf 99940024113228832970899993399999998777899990543378751012212134789200100012301179
Q 004574 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (744)
Q Consensus 80 ~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 159 (744)
. .+..+.|||||+.|+|... .+|
T Consensus 110 --~-----~~~~~~~SPDG~~la~~~~--------------------------------------------------~~i 132 (719)
T 1z68_A 110 --R-----PIQYLCWSPVGSKLAYVYQ--------------------------------------------------NNI 132 (719)
T ss_dssp --S-----SBCCEEECSSTTCEEEEET--------------------------------------------------TEE
T ss_pred --C-----CCCCCEECCCCCEEEEEEC--------------------------------------------------CEE
T ss_conf --6-----0225268899997999978--------------------------------------------------839
Q ss_pred EEECC-CCCEEECCCCC--E-E-----------------EEECCCCCCCEEEEEEEECCCCCCC----------------
Q ss_conf 99858-99704528984--1-5-----------------5301089986699998107743323----------------
Q 004574 160 VLGSL-DGTAKDFGTPA--V-Y-----------------TAVEPSPDQKYVLITSMHRPYSYKV---------------- 202 (744)
Q Consensus 160 ~~~~~-~G~~~~l~~~~--~-~-----------------~~~~~SpDG~~i~~~~~~~~~~~~~---------------- 202 (744)
+++++ +|+..+++..+ . + ..+.|||||++|+|.+.........
T Consensus 133 ~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 212 (719)
T 1z68_A 133 YLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINI 212 (719)
T ss_dssp EEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEE
T ss_pred EEEECCCCCCEEEECCCCCCCEECCCCCCEEEEECCCCCCCEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCEEE
T ss_conf 99867999727870389868768530210234330267652799999998999998777786587302478788630263
Q ss_pred ---CCC--CCCCEEEEEECCCCEEE---ECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCC
Q ss_conf ---567--88500899907997011---2037898888875568855789853110389963999982138998766786
Q 004574 203 ---PCA--RFSQKVQVWTTDGKLVR---ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSP 274 (744)
Q Consensus 203 ---~~~--~~~~~i~~~~~~g~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~spDg~~~l~~~~~~~~~~~~~~~~~ 274 (744)
..+ ....+|++++++++... ++.... .+......+..++|||||+ +++...... +.
T Consensus 213 ~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~SpD~~--~~~~~~~~~-------~~ 276 (719)
T 1z68_A 213 PYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPA-------MIASSDYYFSWLTWVTDER--VCLQWLKRV-------QN 276 (719)
T ss_dssp ECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCH-------HHHTSCEEEEEEEESSSSE--EEEEEEESS-------TT
T ss_pred CCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCC-------CCCCCCCEEEEEEEECCCE--EEEEEECCC-------CC
T ss_conf 3898989898049999989999732116703876-------6777760699868727986--999993544-------68
Q ss_pred CCEEEECC----CCCCCCCCCEEEEE-----ECCCEE-----CEEECCCCCEEEEEEEEECCCEEEEEECCCCCCCCCEE
Q ss_conf 66189525----99999999618654-----054210-----02561599517886541125524999749999986345
Q 004574 275 RDIIYTQP----AEPAEGEKPEILHK-----LDLRFR-----SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 340 (744)
Q Consensus 275 ~~~i~~~~----~~~~~~~~~~~l~~-----~~~~~~-----~~~~SpDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 340 (744)
...|++++ . .+++...++. ....+. .+.|||||+.+++.....++..+||++++.++ +.+.
T Consensus 277 ~~~l~~~d~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~--~~~~ 351 (719)
T 1z68_A 277 VSVLSICDFREDW---QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE--NAIQ 351 (719)
T ss_dssp EEEEEEEEECSSS---SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST--TCEE
T ss_pred EEEEEEECCCCCC---CCCCEEEEEECCCCCCCCEECCCCCCCCEECCCCCEEEEEEECCCCCEEEEEEECCCC--CEEE
T ss_conf 4899998456777---7871079971244557845845557750887899849999882388339999987999--1586
Q ss_pred EECCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCC--CEEEEEECCCHHH
Q ss_conf 10045555469999986450889986899863228863199981478888999761799966899--6568730341022
Q 004574 341 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG--SKERIWESNREKY 418 (744)
Q Consensus 341 l~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g--~~~~l~~~~~~~~ 418 (744)
++..... +. . +.++ ||+.|++..... .......+||.+++.++ +.+.++..-..
T Consensus 352 lt~~~~~-v~----~--~~~~-d~~~i~~~~~~~--------------~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~-- 407 (719)
T 1z68_A 352 ITSGKWE-AI----N--IFRV-TQDSLFYSSNEF--------------EEYPGRRNIYRISIGSYPPSKKCVTCHLRK-- 407 (719)
T ss_dssp CSCSSSC-EE----E--EEEE-CSSEEEEEESCG--------------GGCTTCBEEEEEECSSSSCCEEESSTTTTT--
T ss_pred CCCCCEE-EE----E--EEEE-ECCEEEEEEECC--------------CCCCCEEEEEEEECCCCCCCCEECCCCCCC--
T ss_conf 5358637-99----8--8899-578899998448--------------899744899999678888773231576678--
Q ss_pred HHHEEEEECCCCCEECCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCC----CCCCCCCCEEEEEEECCCCEE
Q ss_conf 2301342138862001347889999993688886599997899952464228999----999678750899998479908
Q 004574 419 FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP----YPTLASLQKEMIKYQRKDGVP 494 (744)
Q Consensus 419 ~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~~~~~~~~~~lt~~~~~----~~~~~~~~~~~i~~~~~~g~~ 494 (744)
... .....+||||++.+++..++...| .++++++.+++..+++..+.. +........+.+++...+ .+
T Consensus 408 --~~~----~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 479 (719)
T 1z68_A 408 --ERC----QYYTASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDE-IT 479 (719)
T ss_dssp --TTB----CBEEEEECGGGSSEEEEECCBSSC-EEEEECSSSCCEEEEEECCHHHHHHTTSBCCCEEEEEEEEETT-EE
T ss_pred --CCC----CEEEEEECCCCCEEEEECCCCCCC-EEEEEECCCCCEEEEEECCHHHHHHHCCCCCCCEEEEEEECCC-EE
T ss_conf --888----628999899988999985799998-3999988999788996226344443200267831899994388-38
Q ss_pred EEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HCCEEEEECCCCCCCCCCCC-
Q ss_conf 9999991899999999993099998799874656578435898866789932589998-58819996699887789998-
Q 004574 495 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDK- 572 (744)
Q Consensus 495 l~~~~~~P~~~~~~~~~~~p~vi~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gy~v~~~~~~~~~g~g~~- 572 (744)
+++.++.|++++++ +++|+||++||++..... ...+.......++ ++||+|+..+.++..+.+..
T Consensus 480 l~~~~~~P~~~~~~--~~~p~vl~~hG~~~~~~~-----------~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~ 546 (719)
T 1z68_A 480 LWYKMILPPQFDRS--KKYPLLIQVYGGPCSQSV-----------RSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKL 546 (719)
T ss_dssp EEEEEEECTTCCSS--SCEEEEEEECCCTTBCCC-----------CCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHH
T ss_pred EEEEEEECCCCCCC--CCCCEEEEECCCCCCCCC-----------CCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHH
T ss_conf 99999938998888--972189998899875754-----------41101439999872498599998679988776146
Q ss_pred ----------CHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC-
Q ss_conf ----------807789999999998499899827999926579999999995999113999725888998887763111-
Q 004574 573 ----------LPNDSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTE- 641 (744)
Q Consensus 573 ----------~~~~d~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~- 641 (744)
...+|+.++++++.++..+|++|++++|+||||++|+.++.++|++|+++|+++|+.++......+...
T Consensus 547 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~ 626 (719)
T 1z68_A 547 LYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTERF 626 (719)
T ss_dssp HGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBHHHHHHH
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCHHH
T ss_conf 88776312765588999999999866887875289999998899999999868884589999078667678214002201
Q ss_pred CCCH--HHCHHHHHHCCCCCCCCCCCC-CEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCH
Q ss_conf 1440--011788985490110378999-8999960999977899799999999999499948999908999326754538
Q 004574 642 FRTL--WEATNVYIEMSPITHANKIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENV 718 (744)
Q Consensus 642 ~~~~--~~~~~~~~~~~~~~~~~~i~~-P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~ 718 (744)
...+ ++..+.+...++...+.++++ |+|++||++|..++ ..++++++++|+..+.+++++++++++|.+. .+..
T Consensus 627 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~-~~~~ 703 (719)
T 1z68_A 627 MGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVH--FQNSAQIAKALVNAQVDFQAMWYSDQNHGLS-GLST 703 (719)
T ss_dssp HCCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCTTCC-THHH
T ss_pred CCCCCCCCCHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCC--HHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CCCH
T ss_conf 278655544455553788688850789858999818989839--8999999999997799559999795898788-4548
Q ss_pred HHHHHHHHHHHHHHCC
Q ss_conf 8999999999999616
Q 004574 719 MHVIWETDRWLQKYCL 734 (744)
Q Consensus 719 ~~~~~~~~~fl~~~l~ 734 (744)
.++++.+.+||+++|+
T Consensus 704 ~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 704 NHLYTHMTHFLKQCFS 719 (719)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 9999999999998619
No 5
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=1.00 E-value=1 Score=427.10 Aligned_cols=582 Identities=15% Similarity=0.135 Sum_probs=409.8
Q ss_pred CEEEEECCCCCCCCCC--EEEECCCCC---------------CCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEE
Q ss_conf 1167423999999992--133038998---------------73352243679874899641254445678952599997
Q 004574 6 GIGIHRLLPDDSLGPE--KEVHGYPDG---------------AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIAD 68 (744)
Q Consensus 6 ~~~~~~~~~~~~~g~~--~~l~~~~~~---------------~~~~~p~~SpDG~~iaf~~~~~~~~~~~~~~~~i~~~~ 68 (744)
+| ++++.. |+. +.+...... ..+..+.|||| ++++|... ..||+++
T Consensus 45 ~i-~~d~~t----g~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~~-----------~~i~~~d 107 (706)
T 2z3z_A 45 DL-VFNKAN----GKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFTQ-----------GGLVGFD 107 (706)
T ss_dssp EE-EEEC-----------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEET-----------TEEEEEE
T ss_pred CE-EEECCC----CCEEEEEEECHHHHHHHCCCHHCCCCCCCCCCEEEEECCC-CEEEEEEC-----------CEEEEEE
T ss_conf 38-997799----9680079566468411125100023112567202898789-75999989-----------9799998
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 79886010446999400241132288329708999933999999987778999905433787510122121347892001
Q 004574 69 AETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDE 148 (744)
Q Consensus 69 ~~gg~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (744)
+++++.++++.... .+..+.|||||+.|+|...
T Consensus 108 ~~~~~~~~l~~~~~-----~~~~~~~SpdG~~la~~~~------------------------------------------ 140 (706)
T 2z3z_A 108 MLARKVTYLFDTNE-----ETASLDFSPVGDRVAYVRN------------------------------------------ 140 (706)
T ss_dssp TTTTEEEEEECCTT-----CCTTCEECTTSSEEEEEET------------------------------------------
T ss_pred CCCCCEEECCCCCC-----CCCCCCCCCCCCEEEEEEC------------------------------------------
T ss_conf 77994687557765-----2247719999998999989------------------------------------------
Q ss_pred HCCCEEEEEEEEEECC-C-----CCEEECCCC-CE---------------EEEECCCCCCCEEEEEEEECCCCCC-----
Q ss_conf 0001230117999858-9-----970452898-41---------------5530108998669999810774332-----
Q 004574 149 SLFDYYTTAQLVLGSL-D-----GTAKDFGTP-AV---------------YTAVEPSPDQKYVLITSMHRPYSYK----- 201 (744)
Q Consensus 149 ~~~~~~~~~~i~~~~~-~-----G~~~~l~~~-~~---------------~~~~~~SpDG~~i~~~~~~~~~~~~----- 201 (744)
.+|+++++ + |+..+++.. .. +..+.|||||++|++.+.+......
T Consensus 141 --------~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~ 212 (706)
T 2z3z_A 141 --------HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVD 212 (706)
T ss_dssp --------TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEE
T ss_pred --------CEEEEEECCCCCCCCCCCEEECCCCCCCEECCCCHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEC
T ss_conf --------869998568544467972896328978727660445654477743899999997999998777895687403
Q ss_pred --------------CC-CCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCC
Q ss_conf --------------35-678850089990799701120378988888755688557898531103899639999821389
Q 004574 202 --------------VP-CARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (744)
Q Consensus 202 --------------~~-~~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spDg~~~l~~~~~~~~~ 266 (744)
.. .......|++|+++++..+.+....... ..+..+.|||||+. |++.+....
T Consensus 213 ~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~----------~~~~~~~~spdg~~-l~~~~~~~~- 280 (706)
T 2z3z_A 213 YHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKE----------KFLTNLSWSPDENI-LYVAEVNRA- 280 (706)
T ss_dssp CCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTT----------CEEEEEEECTTSSE-EEEEEECTT-
T ss_pred CCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCC----------EEEEEEEEECCCCE-EEEEEECCC-
T ss_conf 578898147732788979898048999999899667410477776----------36736799779988-999996788-
Q ss_pred CCCCCCCCCCEEEECCCCCCCCC-CCEEEEEE-CC----CEECEEECC--CCCEEEEEEEEECCCEEEEEECCCCCCCCC
Q ss_conf 98766786661895259999999-96186540-54----210025615--995178865411255249997499999863
Q 004574 267 DANVEVSPRDIIYTQPAEPAEGE-KPEILHKL-DL----RFRSVSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (744)
Q Consensus 267 ~~~~~~~~~~~i~~~~~~~~~~~-~~~~l~~~-~~----~~~~~~~Sp--Dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 338 (744)
.....|++++. .++ ....+... .. .+..++||| ||+.+ +.+ ..++..+||.++.++ ...
T Consensus 281 ------~~~~~v~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l-~~~-~~~g~~~l~~~~~~~--~~~ 347 (706)
T 2z3z_A 281 ------QNECKVNAYDA---ETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFI-WQS-RRDGWNHLYLYDTTG--RLI 347 (706)
T ss_dssp ------SCEEEEEEEET---TTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEE-EEE-CTTSSCEEEEEETTS--CEE
T ss_pred ------CCEEEEEEEEC---CCCCEEEEEEECCCCCEECCCCCCEEECCCCCEEE-EEE-CCCCCCEEEEEECCC--CEE
T ss_conf ------97359999988---88945169997368986885687215238998799-987-367961899997899--878
Q ss_pred EEEECCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCHHH
Q ss_conf 45100455554699999864508899868998632288631999814788889997617999668996568730341022
Q 004574 339 RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKY 418 (744)
Q Consensus 339 ~~l~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 418 (744)
+.++.+... ....+.|||||+.|++..... ......||.+|+.+++.+.+.....
T Consensus 348 ~~l~~~~~~------v~~~~~~spdg~~l~~~~~~~----------------~~~~~~l~~~d~~~~~~~~l~~~~~--- 402 (706)
T 2z3z_A 348 RQVTKGEWE------VTNFAGFDPKGTRLYFESTEA----------------SPLERHFYCIDIKGGKTKDLTPESG--- 402 (706)
T ss_dssp EECCCSSSC------EEEEEEECTTSSEEEEEESSS----------------CTTCBEEEEEETTCCCCEESCCSSS---
T ss_pred EECCCCCEE------EEEEEEECCCCCEEEEEECCC----------------CCCEEEEEEEECCCCCCEECCCCCC---
T ss_conf 756879738------875568848899899995389----------------9734899999767997266467896---
Q ss_pred HHHEEEEECCCCCEECCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCC-EEEEE
Q ss_conf 23013421388620013478899999936888865999978999524642289999996787508999984799-08999
Q 004574 419 FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDG-VPLTA 497 (744)
Q Consensus 419 ~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~i~~~~~~g-~~l~~ 497 (744)
+. .++|||||+.+++...+...|++++++++++++...++..+ ..........+.+.+...+| .++++
T Consensus 403 ---~~-------~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~ 471 (706)
T 2z3z_A 403 ---MH-------RTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKN-PDTGYAMPEIRTGTIMAADGQTPLYY 471 (706)
T ss_dssp ---EE-------EEEECTTSSEEEEEEECSSCSCEEEEEESSSCEEEEEECC-------CCCCEEEEEEECTTSSSEEEE
T ss_pred ---EE-------EEEECCCCCEEEEEECCCCCCCEEEEEECCCCEEEECCCCC-HHHHCCCCCCEEEEEECCCCCEEEEE
T ss_conf ---17-------99999999899999258998857999999997576315655-03434799737999985899789899
Q ss_pred EEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCC-----
Q ss_conf 999189999999999309999879987465657843589886678993258999858819996699887789998-----
Q 004574 498 TLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK----- 572 (744)
Q Consensus 498 ~~~~P~~~~~~~~~~~p~vi~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gy~v~~~~~~~~~g~g~~----- 572 (744)
.++.|+++++++ ++|+||++||++..... ...|.......+..|+++||.|+..+.++..+.+..
T Consensus 472 ~~~~P~~~~~~~--~~p~iv~~HGg~~~~~~--------~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~~ 541 (706)
T 2z3z_A 472 KLTMPLHFDPAK--KYPVIVYVYGGPHAQLV--------TKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVI 541 (706)
T ss_dssp EEECCTTCCTTS--CEEEEEECCCCTTCCCC--------CSCC----CCHHHHHHHTTCEEEEECCTTCSSSCHHHHHTT
T ss_pred EEEECCCCCCCC--CCCEEEEECCCCCCEEE--------CCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHH
T ss_conf 998089989889--75589996689985155--------42135670589999986990999981689862425678877
Q ss_pred ------CHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC-CCCCH
Q ss_conf ------80778999999999849989982799992657999999999599911399972588899888776311-11440
Q 004574 573 ------LPNDSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQT-EFRTL 645 (744)
Q Consensus 573 ------~~~~d~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~-~~~~~ 645 (744)
...+|+.++++++.++..+|.+|++++||||||++|+.++.++|++|+++|+.+|+.++......+.. ....+
T Consensus 542 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 621 (706)
T 2z3z_A 542 HRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYAIMYGERYFDAP 621 (706)
T ss_dssp TTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSBHHHHHHHHCCT
T ss_pred HHCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 61468764778999999998678988201589987818999999997498807999994784456887756636436982
Q ss_pred HHCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHH
Q ss_conf 01178898549011037899989999609999778997999999999994999489999089993267545388999999
Q 004574 646 WEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWET 725 (744)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~i~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 725 (744)
+..++.+...++...+.++++|+|++||++|..+| +.++++++++++..+.+++++++|+++|.+... .+.++++.+
T Consensus 622 ~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i 698 (706)
T 2z3z_A 622 QENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVV--WQHSLLFLDACVKARTYPDYYVYPSHEHNVMGP-DRVHLYETI 698 (706)
T ss_dssp TTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSC--THHHHHHHHHHHHHTCCCEEEEETTCCSSCCTT-HHHHHHHHH
T ss_pred CCCHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCC--HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC-CHHHHHHHH
T ss_conf 01855666479867487679988999608888989--899999999998779974999959799777866-479999999
Q ss_pred HHHHHHHC
Q ss_conf 99999961
Q 004574 726 DRWLQKYC 733 (744)
Q Consensus 726 ~~fl~~~l 733 (744)
.+||+++|
T Consensus 699 ~~fl~~~l 706 (706)
T 2z3z_A 699 TRYFTDHL 706 (706)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHC
T ss_conf 99999769
No 6
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=1.00 E-value=1 Score=418.35 Aligned_cols=578 Identities=16% Similarity=0.148 Sum_probs=407.0
Q ss_pred CCCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCC----CCCCCCEEEE--CCCCE-EE
Q ss_conf 87335224367987489964125444567895259999779886010446999400----2411322883--29708-99
Q 004574 30 GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL----NAVFGSFVWV--NNSTL-LI 102 (744)
Q Consensus 30 ~~~~~~p~~SpDG~~iaf~~~~~~~~~~~~~~~~i~~~~~~gg~~~~lt~~~~~~~----~~~~~~~~ws--pDg~~-l~ 102 (744)
...+..|+||+| +++|++.+. ..++...||++ ..+++.++||....... ..+-..+.|+ |||+. |+
T Consensus 23 ~~~~~~~~~s~~--~~~~~~~~~----~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 23 SGRPACVGAVGD--EVWWVAPRP----AEAGRATLVRR-RADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp CSCCEEEEEETT--EEEEEEEET----TTTTEEEEEEE-CTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred CCCCCEEEECCC--EEEEEECCC----CCCCCEEEEEE-CCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEE
T ss_conf 886221588698--289980575----65896899998-99997125078986535330210875120135148984999
Q ss_pred EEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEEEECCC----CCEEECCC-----
Q ss_conf 993399999998777899990543378751012212134789200100012301179998589----97045289-----
Q 004574 103 FTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD----GTAKDFGT----- 173 (744)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----G~~~~l~~----- 173 (744)
|+... ..+||+++++ |+.++|+.
T Consensus 96 ~~~~~------------------------------------------------~~~l~~~~~~~~g~~~~~~l~~~~~~~ 127 (662)
T 3azo_A 96 FTHFG------------------------------------------------DQRLYAFEPDAPGGAVPRPLTPVSAVG 127 (662)
T ss_dssp EEBTT------------------------------------------------TCCEEEECTTSTTCCCCEECSCCCCST
T ss_pred EEECC------------------------------------------------CCEEEEECCCCCCCCCCEECCCCCCCC
T ss_conf 99889------------------------------------------------981999838987789877216876677
Q ss_pred C-CEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCC------CEEEECC-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 8-41553010899866999981077433235678850089990799------7011203-78988888755688557898
Q 004574 174 P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG------KLVRELC-DLPPAEDIPVCYNSVREGMR 245 (744)
Q Consensus 174 ~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~g------~~~~~l~-~~~~~~~~~~~~~~~~~~~~ 245 (744)
. ..+..++|||||++|+|.+...... . ......+|+++++++ +..++++ ..... ..
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~--~-~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~-------------~~ 191 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGE--G-PSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRF-------------VT 191 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSS--S-TTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSE-------------EC
T ss_pred CCCCCCCCEECCCCCEEEEEEECCCCC--C-CCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCC-------------CC
T ss_conf 886566727889998899999046677--8-8986258999989987656688605988647886-------------22
Q ss_pred CCCEECCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCC-CC---CCEEEEEE-CCCEECEEECCCCCEEEEEEEEE
Q ss_conf 531103899639999821389987667866618952599999-99---96186540-54210025615995178865411
Q 004574 246 SISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-GE---KPEILHKL-DLRFRSVSWCDDSLALVNETWYK 320 (744)
Q Consensus 246 ~~~~spDg~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~---~~~~l~~~-~~~~~~~~~SpDg~~l~~~~~~~ 320 (744)
.+.|||||+. |++.+....... .....|+++++ + ++ +.+.++.. ...+..+.|||||+ ++|.+ ..
T Consensus 192 ~~~~SpDG~~-la~~~~~~~~~~----~~~~~i~~~d~---~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~-~~ 261 (662)
T 3azo_A 192 GPRLSPDGRQ-AVWLAWDHPRMP----WEGTELKTARV---TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVAT-DR 261 (662)
T ss_dssp CCEECTTSSE-EEEEEECTTCCT----TTCEEEEEEEE---CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEE-CT
T ss_pred CCEECCCCCE-EEEEECCCCCCC----CCCCEEEEEEE---CCCCCCCCCEEECCCCCCEECCEEECCCCE-EEEEE-CC
T ss_conf 8329999998-999977899999----78767999997---788852421895789884271207878990-99998-79
Q ss_pred CCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEE
Q ss_conf 25524999749999986345100455554699999864508899868998632288631999814788889997617999
Q 004574 321 TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLF 400 (744)
Q Consensus 321 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~ 400 (744)
++..+||++++.+ ++.+.++...... ..| .|+++...+++.. ++..++... . ....||.+
T Consensus 262 ~~~~~l~~~~~~~--~~~~~l~~~~~~~-----~~p--~w~~~~~~~~~~~-----~~~~~~~~~-----~-~~~~l~~~ 321 (662)
T 3azo_A 262 TGWWNLHRVDPAT--GAATQLCRREEEF-----AGP--LWTPGMRWFAPLA-----NGLIAVVHG-----K-GAAVLGIL 321 (662)
T ss_dssp TSSCEEEEECTTT--CCEEESSCCSSBS-----SCC--CCSTTCCSEEECT-----TSCEEEEEB-----S-SSCEEEEE
T ss_pred CCCEEEEEEECCC--CCEEECCCCCCCC-----CCC--CCCCCCCEEEEEC-----CCEEEEEEE-----C-CCCEEEEE
T ss_conf 9974899997899--9465146641233-----676--5332674574707-----998999997-----5-76389999
Q ss_pred ECCCCCEEEEEECCCHHHHHHEEEEECCCCCEEC-CCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCC-CCCC
Q ss_conf 6689965687303410222301342138862001-3478899999936888865999978999524642289999-9967
Q 004574 401 DINTGSKERIWESNREKYFETAVALVFGQGEEDI-NLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPY-PTLA 478 (744)
Q Consensus 401 d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-s~d~~~l~~~~~~~~~~~~i~~~~~~~~~~~~lt~~~~~~-~~~~ 478 (744)
|+.+++.+++...... +. .+ +++++.+++...+...+..+|++++++++.++|+..+... ....
T Consensus 322 d~~~~~~~~l~~~~~~-----~~---------~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~ 387 (662)
T 3azo_A 322 DPESGELVDAAGPWTE-----WA---------ATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAY 387 (662)
T ss_dssp ETTTTEEEECCSSCCE-----EE---------EEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGG
T ss_pred ECCCCCEEEECCCCCE-----EE---------EEEECCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCC
T ss_conf 8999937880589976-----88---------888458998999986799997799998899966885257766577344
Q ss_pred CCCEEEEEEECCCCEEEEEEEEECCCCC--CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCE
Q ss_conf 8750899998479908999999189999--99999930999987998746565784358988667899325899985881
Q 004574 479 SLQKEMIKYQRKDGVPLTATLYLPPGYD--QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 556 (744)
Q Consensus 479 ~~~~~~i~~~~~~g~~l~~~~~~P~~~~--~~~~~~~p~vi~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gy 556 (744)
....+.+.+...++.+++++++.|++++ ....++.|+||++||++.... .......+..|+++||
T Consensus 388 ~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~-------------~~~~~~~~~~l~~~G~ 454 (662)
T 3azo_A 388 YPEPQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRV-------------PAVLDLDVAYFTSRGI 454 (662)
T ss_dssp SCCCEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCC-------------CCSCCHHHHHHHTTTC
T ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCC-------------CCCCHHHHHHHHHCCC
T ss_conf 676569999758997899999878996656777898668999789987667-------------6420299999986898
Q ss_pred EEEECCCCCCCCCCCC-----------CHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 9996699887789998-----------80778999999999849989982799992657999999999599911399972
Q 004574 557 AVLAGPSIPIIGEGDK-----------LPNDSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 625 (744)
Q Consensus 557 ~v~~~~~~~~~g~g~~-----------~~~~d~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~a~~~p~~~~a~v~~ 625 (744)
+|+..++++..++|.+ ...+|+.+++++++++..+|++|++++|+||||++|+.++.+ |++|+++++.
T Consensus 455 ~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~ 533 (662)
T 3azo_A 455 GVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVL 533 (662)
T ss_dssp EEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEE
T ss_pred EEEEECCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHC-CCCEEEEEEC
T ss_conf 999978899888658899863366564449999999999997478682018999889999999999728-6753799930
Q ss_pred CCCCCCCCC------CCC--CCC-CCCCHHHCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 588899888------776--311-11440011788985490110378999899996099997789979999999999949
Q 004574 626 SGSYNKTLT------PFG--FQT-EFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGH 696 (744)
Q Consensus 626 ~~~~~~~~~------~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~ 696 (744)
+|+.+.... ... +.. ......+..+.+...+|..++.++++|+|++||++|.++| +.++++++++|+..
T Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~ 611 (662)
T 3azo_A 534 YPVLDLLGWADGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCP--PEQCDRFLEAVAGC 611 (662)
T ss_dssp SCCCCHHHHHTTCSCGGGTTHHHHHTCCTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHHTTS
T ss_pred CCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCHHHHHCCCCCCEEEEEECCCCCCC--HHHHHHHHHHHHHC
T ss_conf 7732788871455530566768977088711056777509576756479988998209999879--89999999999986
Q ss_pred CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 994899990899932675453889999999999996167999
Q 004574 697 GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTS 738 (744)
Q Consensus 697 g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 738 (744)
+.+++++++++++|.+...+...++++.+.+||.++|+....
T Consensus 612 g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 653 (662)
T 3azo_A 612 GVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFGVEVA 653 (662)
T ss_dssp CCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 998799998989987787178999999999999998388989
No 7
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=1.00 E-value=1 Score=415.80 Aligned_cols=539 Identities=15% Similarity=0.117 Sum_probs=386.4
Q ss_pred CCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCC
Q ss_conf 33522436798748996412544456789525999977988601044699940024113228832970899993399999
Q 004574 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (744)
Q Consensus 32 ~~~~p~~SpDG~~iaf~~~~~~~~~~~~~~~~i~~~~~~gg~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (744)
.+....+||||++|||++.. ++..+||.+ ++++.+++|..... .+..+.|||| + ++|+.....+.
T Consensus 23 ~~~~~~~~~DG~~la~~s~~-------~g~~~lw~~--~~g~~~~lt~~~~~----~~~~~~~spd-~-~l~~~~~~~g~ 87 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFS-------EGSVNAYLY--DGGETVKLNREPIN----SVLDPHYGVG-R-VILVRDVSKGA 87 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEE-------TTEEEEEEE--ETTEEEECCSSCCS----EECEECTTCS-E-EEEEEECSTTS
T ss_pred CHHEEECCCCCCEEEEEECC-------CCCEEEEEE--CCCCCEEEECCCCC----CCCCCCCCCC-E-EEEEECCCCCC
T ss_conf 05205407898859999746-------895469998--69970751025466----5213357798-6-99996147887
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEEEECC--CCCEEECCCCCEEEEECCCCCCCEE
Q ss_conf 99877789999054337875101221213478920010001230117999858--9970452898415530108998669
Q 004574 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL--DGTAKDFGTPAVYTAVEPSPDQKYV 189 (744)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~G~~~~l~~~~~~~~~~~SpDG~~i 189 (744)
...+||.+++ +|...+++........+|||||+.+
T Consensus 88 -------------------------------------------~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~ 124 (582)
T 3o4h_A 88 -------------------------------------------EQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAV 124 (582)
T ss_dssp -------------------------------------------CCEEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCE
T ss_pred -------------------------------------------CCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEE
T ss_conf -------------------------------------------4168999833678763444588984023207899738
Q ss_pred EEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCC
Q ss_conf 99981077433235678850089990799701120378988888755688557898531103899639999821389987
Q 004574 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (744)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spDg~~~l~~~~~~~~~~~~ 269 (744)
+|.+...+ .+.+|++++++.++++..+. ..+.|||||+. |++.+...+..
T Consensus 125 ~~~s~~~~------------~~~l~d~~~g~~~~l~~~~~---------------~~~~~spDG~~-la~~~~~~~~~-- 174 (582)
T 3o4h_A 125 VFTGATED------------RVALYALDGGGLRELARLPG---------------FGFVSDIRGDL-IAGLGFFGGGR-- 174 (582)
T ss_dssp EEEEECSS------------CEEEEEEETTEEEEEEEESS---------------CEEEEEEETTE-EEEEEEEETTE--
T ss_pred EEEECCCC------------CCEEEECCCCCEEEEECCCC---------------CEEEECCCCCE-EEEEEECCCCC--
T ss_conf 99833899------------75489826882799350887---------------16988899989-99998748997--
Q ss_pred CCCCCCCEEEECCCCCCCCCCCEEEEEECCCEECEEECCCCCEEEEEEEEECCCEEEEEECCCCCCCCCEEEECCCCCCC
Q ss_conf 66786661895259999999961865405421002561599517886541125524999749999986345100455554
Q 004574 270 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 349 (744)
Q Consensus 270 ~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 349 (744)
..||++++ .+++.+.|+.....+..++|||||+.|+ .+ ..++..+||+++++++ +.+ ++......+
T Consensus 175 ------~~i~~~d~---~~g~~~~l~~~~~~~~~~~~SpDG~~l~-~~-~~~~~~~i~~~d~~~~--~~~-~~~~~~~~~ 240 (582)
T 3o4h_A 175 ------VSLFTSNL---SSGGLRVFDSGEGSFSSASISPGMKVTA-GL-ETAREARLVTVDPRDG--SVE-DLELPSKDF 240 (582)
T ss_dssp ------EEEEEEET---TTCCCEEECCSSCEEEEEEECTTSCEEE-EE-ECSSCEEEEEECTTTC--CEE-ECCCSCSHH
T ss_pred ------EEEEEECC---CCCCCEEEECCCCCCCCCEECCCCCEEE-EC-CCCCEEEEEEECCCCC--CEE-ECCCCCCCH
T ss_conf ------39999827---8897369316888543623889998799-81-6898008999918999--679-824898584
Q ss_pred CCC--CCCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHEEEEEC
Q ss_conf 699--999864508899868998632288631999814788889997617999668996568730341022230134213
Q 004574 350 YSD--PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVF 427 (744)
Q Consensus 350 ~~~--~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~ 427 (744)
... .......||||| .+++....+ ..+.++++ |+..+. ..+ .+.
T Consensus 241 ~~~~~~~~~~~~~spdg-~~~~~~~~~--------------------g~~~l~~~--g~~~~~--~~~-----~v~---- 286 (582)
T 3o4h_A 241 SSYRPTAITWLGYLPDG-RLAVVARRE--------------------GRSAVFID--GERVEA--PQG-----NHG---- 286 (582)
T ss_dssp HHHCCSEEEEEEECTTS-CEEEEEEET--------------------TEEEEEET--TEEECC--CSS-----EEE----
T ss_pred HHHHHCCCCCEEECCCC-CEEEEEECC--------------------CCEEEEEE--CCEECC--CCC-----CEE----
T ss_conf 45311345560486998-499999908--------------------92899997--976236--888-----557----
Q ss_pred CCCCEECCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCC
Q ss_conf 88620013478899999936888865999978999524642289999996787508999984799089999991899999
Q 004574 428 GQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQ 507 (744)
Q Consensus 428 ~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~i~~~~~~g~~l~~~~~~P~~~~~ 507 (744)
.+++| |+ .++++.++...|+++|++++.+ +.++| ..+ +.+.......+.+.+...+|.+++++++.|++..+
T Consensus 287 ---~~~~s-dg-~~l~~~s~~~~p~~l~~~d~~~-~~~~l-~~~-~~~~~~~~~~~~~~~~~~~g~~i~~~~~~p~~~~~ 358 (582)
T 3o4h_A 287 ---RVVLW-RG-KLVTSHTSLSTPPRIVSLPSGE-PLLEG-GLP-EDLRRSIAGSRLVWVESFDGSRVPTYVLESGRAPT 358 (582)
T ss_dssp ---EEEEE-TT-EEEEEEEETTEEEEEEEETTCC-EEECC-CCC-HHHHHTEEEEEEEEEECTTSCEEEEEEEEETTSCS
T ss_pred ---EEEEC-CC-EEEEEECCCCCCCEEEEECCCC-CEEEE-ECC-CCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCC
T ss_conf ---89961-99-8999985799997699992899-66998-618-75444568636999998999799999983899899
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCC-----------CHHH
Q ss_conf 99999309999879987465657843589886678993258999858819996699887789998-----------8077
Q 004574 508 SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK-----------LPND 576 (744)
Q Consensus 508 ~~~~~~p~vi~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gy~v~~~~~~~~~g~g~~-----------~~~~ 576 (744)
+.|+||++||+++... .......+..|+++||.|+.+++++..++|.+ ...+
T Consensus 359 ----~~p~vv~~HG~~~~~~-------------~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~~~~~ 421 (582)
T 3o4h_A 359 ----PGPTVVLVHGGPFAED-------------SDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELE 421 (582)
T ss_dssp ----SEEEEEEECSSSSCCC-------------CSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHH
T ss_pred ----CCCEEEEECCCCCCCC-------------CCCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCHH
T ss_conf ----9768999899952246-------------66658899999859979999626998887566776455430544499
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC-----CCCCHHHCHHH
Q ss_conf 8999999999849989982799992657999999999599911399972588899888776311-----11440011788
Q 004574 577 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQT-----EFRTLWEATNV 651 (744)
Q Consensus 577 d~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 651 (744)
|+.++++++.++..+| +++++|||+||++|+.++.++|++++++++++|+.++......... .....-...+.
T Consensus 422 d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (582)
T 3o4h_A 422 DVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGSREI 499 (582)
T ss_dssp HHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHHCCCCC--EEEEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHCCCCHHH
T ss_conf 9999999998578843--69999989999999999860988369999767862789885246504678899771828788
Q ss_pred HHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 98549011037899989999609999778997999999999994999489999089993267545388999999999999
Q 004574 652 YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 731 (744)
Q Consensus 652 ~~~~~~~~~~~~i~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 731 (744)
+...+|...+.++++|+|++||++|..+| +.++++++++++..+.+++++++++++|.+...+...++++.+.+||++
T Consensus 500 ~~~~sp~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 577 (582)
T 3o4h_A 500 MRSRSPINHVDRIKEPLALIHPQNASRTP--LKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLAT 577 (582)
T ss_dssp HHHTCGGGGGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHH
T ss_pred HHHCCHHHHHHCCCCCEEEEECCCCCCCC--HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 87639777872679988999629988869--8999999999986799879999798998998767899999999999998
Q ss_pred HCCC
Q ss_conf 6167
Q 004574 732 YCLS 735 (744)
Q Consensus 732 ~l~~ 735 (744)
+|+.
T Consensus 578 ~l~~ 581 (582)
T 3o4h_A 578 QRER 581 (582)
T ss_dssp HHTC
T ss_pred HCCC
T ss_conf 7078
No 8
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=1.00 E-value=1 Score=410.97 Aligned_cols=581 Identities=16% Similarity=0.104 Sum_probs=399.6
Q ss_pred CCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEECCCCCCC--CCCCCCCCCEEEECCCCEEEEEECCCCCC
Q ss_conf 5224367987489964125444567895259999779886010446999--40024113228832970899993399999
Q 004574 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD--ICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (744)
Q Consensus 34 ~~p~~SpDG~~iaf~~~~~~~~~~~~~~~~i~~~~~~gg~~~~lt~~~~--~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (744)
..+..+|||++++|++... ......||+++..+++.++|+.... ......+..+.|||||++|+|+....+.+
T Consensus 71 ~~~~p~~dG~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~ 145 (695)
T 2bkl_A 71 SVSTPSRRNGRFFYVRTHK-----DKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAAD 145 (695)
T ss_dssp EECCCEEETTEEEEEEECT-----TCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCS
T ss_pred CCCCCEEECCEEEEEEECC-----CCEEEEEEEECCCCCCCEEEECHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCC
T ss_conf 6778889899999999769-----98088999994899986798866892668987998799999899899998789983
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEEEECC-CCCEEECCCC--CEEEEECCCCCCCE
Q ss_conf 99877789999054337875101221213478920010001230117999858-9970452898--41553010899866
Q 004574 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP--AVYTAVEPSPDQKY 188 (744)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~G~~~~l~~~--~~~~~~~~SpDG~~ 188 (744)
..+|+++++ +|+..+.... .....++|||||+.
T Consensus 146 --------------------------------------------~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~ 181 (695)
T 2bkl_A 146 --------------------------------------------EAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKG 181 (695)
T ss_dssp --------------------------------------------CCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSE
T ss_pred --------------------------------------------EEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCE
T ss_conf --------------------------------------------689999999999886776457630364699459979
Q ss_pred EEEEEEECCCCCCCCCCCCCCEEEEEECCCCEE--EECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCC
Q ss_conf 999981077433235678850089990799701--120378988888755688557898531103899639999821389
Q 004574 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (744)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~spDg~~~l~~~~~~~~~ 266 (744)
|+|.+................+||++++.++.. +.+...+... .....+.|||||+. |++.+....
T Consensus 182 l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~----------~~~~~~~~SpDG~~-l~~~~~~~~- 249 (695)
T 2bkl_A 182 FYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDP----------TTFLQSDLSRDGKY-LFVYILRGW- 249 (695)
T ss_dssp EEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCT----------TCEEEEEECTTSCC-EEEEEEETT-
T ss_pred EEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHCEEEEECCCCC----------EEEEEEEECCCCCE-EEEEEECCC-
T ss_conf 999985688877544478887899998999914443787248998----------79998899999989-999992799-
Q ss_pred CCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCEECEEECCCCCEEEEEEEEECCCEEEEEECCCCCCC-CCEEEECCC
Q ss_conf 9876678666189525999999996186540542100256159951788654112552499974999998-634510045
Q 004574 267 DANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-APRVLFDRV 345 (744)
Q Consensus 267 ~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~l~~~~ 345 (744)
....||+++. .+++.+.|+........+.| +||+ +++.++.......|++++++++.. ..+.++...
T Consensus 250 -------~~~~l~~~~~---~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 317 (695)
T 2bkl_A 250 -------SENDVYWKRP---GEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED 317 (695)
T ss_dssp -------TEEEEEEECT---TCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC
T ss_pred -------CCEEEEEECC---CCCCEEEEECCCCCEEEEEE-CCCC-EEEEECCCCCCCEEEEEECCCCCCCCCEEEECCC
T ss_conf -------8437999837---98860895358884599993-4796-9999879998978999858988746786995579
Q ss_pred CC-CCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHEEE
Q ss_conf 55-54699999864508899868998632288631999814788889997617999668996568730341022230134
Q 004574 346 FE-NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 424 (744)
Q Consensus 346 ~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 424 (744)
.. .+.. ++|+ +..|++.... .....|+++++.++..+.+...... .+.
T Consensus 318 ~~~~l~~------~~~~--~~~lv~~~~~------------------dg~~~l~~~~~~g~~~~~l~~~~~~----~v~- 366 (695)
T 2bkl_A 318 SSASLLS------VSIV--GGHLSLEYLK------------------DATSEVRVATLKGKPVRTVQLPGVG----AAS- 366 (695)
T ss_dssp SSCEEEE------EEEE--TTEEEEEEEE------------------TTEEEEEEEETTCCEEEECCCSSSS----EEC-
T ss_pred CCCEEEE------EEEE--CCEEEEEEEE------------------CCEEEEEEEECCCCEEEEECCCCCE----EEE-
T ss_conf 9976999------9999--9999999998------------------9999999995899816874699981----799-
Q ss_pred EECCCCCEECCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCC
Q ss_conf 21388620013478899999936888865999978999524642289999996787508999984799089999991899
Q 004574 425 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPG 504 (744)
Q Consensus 425 ~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~i~~~~~~g~~l~~~~~~P~~ 504 (744)
.++++||++.+++..++...|+++|++++.+++.+.++..+.. .....+..+.+.+.+.+|.+++++++.|++
T Consensus 367 ------~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~ 439 (695)
T 2bkl_A 367 ------NLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDVP-MNPEQYQVEQVFYASKDGTKVPMFVVHRKD 439 (695)
T ss_dssp ------CCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEECCCS-SCGGGEEEEEEEEECTTSCEEEEEEEEETT
T ss_pred ------EEECCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCC-CCHHHCEEEEEEEECCCCCEEEEEEEECCC
T ss_conf ------8634789887999981899899899999899947997617778-887788699999988999799799997888
Q ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCC-----------C
Q ss_conf 99999999309999879987465657843589886678993258999858819996699887789998-----------8
Q 004574 505 YDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK-----------L 573 (744)
Q Consensus 505 ~~~~~~~~~p~vi~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gy~v~~~~~~~~~g~g~~-----------~ 573 (744)
++.+ ++.|+||++||++..... ..+ ......|+++||+|+.++.++..++|.. .
T Consensus 440 ~~~~--~~~p~vl~~hGg~~~~~~---------~~~----~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~ 504 (695)
T 2bkl_A 440 LKRD--GNAPTLLYGYGGFNVNME---------ANF----RSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQN 504 (695)
T ss_dssp CCCS--SCCCEEEECCCCTTCCCC---------CCC----CGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHH
T ss_pred CCCC--CCCCEEEEECCCCCCCCC---------CCC----CHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCC
T ss_conf 8889--994389997899854567---------776----7899999969989999935998886878998567552787
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC-C----CCCCCCCH--H
Q ss_conf 077899999999984998998279999265799999999959991139997258889988877-6----31111440--0
Q 004574 574 PNDSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF-G----FQTEFRTL--W 646 (744)
Q Consensus 574 ~~~d~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~-~----~~~~~~~~--~ 646 (744)
..+|+.++++++.++..+|++||+++|+|+||++++.++.++|++|+++|+.+|+.+...... . +..+...+ .
T Consensus 505 ~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~ 584 (695)
T 2bkl_A 505 VFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRTWIPEYGTAEKP 584 (695)
T ss_dssp HHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSH
T ss_pred CHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHCCCCCCCCCHHHHHCCCCCH
T ss_conf 49999999999997699980208999989999999999974974237999868953121043667885028870898887
Q ss_pred HCHHHHHHCCCCCCCCCCC--CCEEEEEECCCCCCCCCHHHHHHHHHHHHH---CCCCEEEEEECCCCCCCCC-CCCHHH
Q ss_conf 1178898549011037899--989999609999778997999999999994---9994899990899932675-453889
Q 004574 647 EATNVYIEMSPITHANKIK--KPILIIHGEVDDKVGLFPMQAERFFDALKG---HGALSRLVLLPFEHHVYAA-RENVMH 720 (744)
Q Consensus 647 ~~~~~~~~~~~~~~~~~i~--~P~li~~G~~D~~v~~~~~~~~~~~~~l~~---~g~~~~~~~~~~~~H~~~~-~~~~~~ 720 (744)
+..+.+..++|+.++.+++ +|+|++||++|.+|+ +.++++++++|+. .+.++++.++++++|++.. .....+
T Consensus 585 ~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 662 (695)
T 2bkl_A 585 EDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVD--PMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIE 662 (695)
T ss_dssp HHHHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSC--THHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHH
T ss_pred HHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCC--HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHH
T ss_conf 899999866947665005778878999638999779--679999999987544489988999969998688788778999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 9999999999961679999999
Q 004574 721 VIWETDRWLQKYCLSNTSDGKC 742 (744)
Q Consensus 721 ~~~~~~~fl~~~l~~~~~~~~~ 742 (744)
.+..+++||.++|+....+..|
T Consensus 663 ~~~~~~~fl~~~l~~~~~~~~~ 684 (695)
T 2bkl_A 663 SSVDLYSFLFQVLDVQGAQGGV 684 (695)
T ss_dssp HHHHHHHHHHHHTTC-------
T ss_pred HHHHHHHHHHHHCCCCCCCCCH
T ss_conf 9999999999875999888601
No 9
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=1.00 E-value=1 Score=407.33 Aligned_cols=578 Identities=14% Similarity=0.103 Sum_probs=394.5
Q ss_pred CCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEECCCCCCC--CCCCCCCCCEEEECCCCEEEEEECCCC
Q ss_conf 335224367987489964125444567895259999779886010446999--400241132288329708999933999
Q 004574 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD--ICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (744)
Q Consensus 32 ~~~~p~~SpDG~~iaf~~~~~~~~~~~~~~~~i~~~~~~gg~~~~lt~~~~--~~~~~~~~~~~wspDg~~l~~~~~~~~ 109 (744)
....| +|||++++|+... .......||+++..+++.+.|+.... ......+..+.|||||++|+|.+...+
T Consensus 75 ~~~~p--~~dG~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G 147 (710)
T 2xdw_A 75 KYSCH--FKKGKRYFYFYNT-----GLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASG 147 (710)
T ss_dssp EECCC--EEETTEEEEEEEC-----SSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETT
T ss_pred CCCCC--EEECCEEEEEEEC-----CCCEEEEEEEECCCCCCCEEEECHHHHCCCCCEEEEEEEECCCCCEEEEEECCCC
T ss_conf 57789--8989999999976-----9965879999848999868987778906689879977899899998999986899
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEEEECC-CCCEEECCCC-CEEEEECCCCCCC
Q ss_conf 9999877789999054337875101221213478920010001230117999858-9970452898-4155301089986
Q 004574 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQK 187 (744)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~G~~~~l~~~-~~~~~~~~SpDG~ 187 (744)
.. ..+|+++++ +|+..+++.. ..+..++|||||+
T Consensus 148 ~~--------------------------------------------~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~ 183 (710)
T 2xdw_A 148 SD--------------------------------------------WVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGK 183 (710)
T ss_dssp CS--------------------------------------------CEEEEEEETTTTEEEEEEEEEECSCCEEECTTSS
T ss_pred CC--------------------------------------------EEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 72--------------------------------------------5899999999999986414674053079970799
Q ss_pred EEEEEEEECCCC---CCCCCCCCCCEEEEEECCCCEEE--ECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEE
Q ss_conf 699998107743---32356788500899907997011--2037898888875568855789853110389963999982
Q 004574 188 YVLITSMHRPYS---YKVPCARFSQKVQVWTTDGKLVR--ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (744)
Q Consensus 188 ~i~~~~~~~~~~---~~~~~~~~~~~i~~~~~~g~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~spDg~~~l~~~~~ 262 (744)
.|+|.+...... ..........+||++++.++... .+...+... .....+.|||||+. |++.+.
T Consensus 184 ~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~----------~~~~~~~~SpDg~~-l~~~~~ 252 (710)
T 2xdw_A 184 GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEP----------KWMGGAELSDDGRY-VLLSIR 252 (710)
T ss_dssp EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCT----------TCEEEEEECTTSCE-EEEEEE
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCC----------EEEEEEEECCCCCE-EEEEEE
T ss_conf 9999987785544556533368987899998999950024786458997----------47999998589998-999998
Q ss_pred ECCCCCCCCCCCCCEEEECCCCCCCC------C--CCEEEEEECCCEECEEECCCCCEEEEEEEEECCCEEEEEECCCCC
Q ss_conf 13899876678666189525999999------9--961865405421002561599517886541125524999749999
Q 004574 263 QDRGDANVEVSPRDIIYTQPAEPAEG------E--KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (744)
Q Consensus 263 ~~~~~~~~~~~~~~~i~~~~~~~~~~------~--~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (744)
.... ....||++++ ++ + ..+.++...... ...|+|||+.|++.++......+|+++++.++
T Consensus 253 ~~~~-------~~~~l~~~d~---~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 253 EGCD-------PVNRLWYCDL---QQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp CSSS-------SCCEEEEEEG---GGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred CCCC-------CCCEEEEEEC---CCCCCCCCCCCCEEEEECCCCCE-EEEEECCCCEEEEEECCCCCCCEEEEEECCCC
T ss_conf 3578-------8627999988---10244558866608965798867-99894359899999799888988999968988
Q ss_pred CC-CCEEEECCCCC-CCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCC-EEEEE
Q ss_conf 98-63451004555-54699999864508899868998632288631999814788889997617999668996-56873
Q 004574 335 DV-APRVLFDRVFE-NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS-KERIW 411 (744)
Q Consensus 335 ~~-~~~~l~~~~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~-~~~l~ 411 (744)
.. ..+.++..... .+. .+.|++++ .+++.... .....|+++++.+|+ .+.+.
T Consensus 322 ~~~~~~~l~~~~~~~~~~------~~~~~~~~-~lv~~~~~------------------~g~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 322 EESKWKVLVPEHEKDVLE------WVACVRSN-FLVLCYLH------------------DVKNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp CGGGCEEEECCCSSCEEE------EEEEETTT-EEEEEEEE------------------TTEEEEEEEETTTCCEEEEEC
T ss_pred CCCCCEECCCCCCCCEEE------EEEEECCC-EEEEEEEE------------------CCEEEEEEEECCCCCEEEECC
T ss_conf 710262322799997697------99997599-99999997------------------999999999878898877637
Q ss_pred ECCCHHHHHHEEEEECCCCCEECCCCCCEEEEEEECCCCCCEEEEEECCCCC--EEEEECCCCCCCCCCCCCEEEEEEEC
Q ss_conf 0341022230134213886200134788999999368888659999789995--24642289999996787508999984
Q 004574 412 ESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK--SSQITNFPHPYPTLASLQKEMIKYQR 489 (744)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~~~~~~~--~~~lt~~~~~~~~~~~~~~~~i~~~~ 489 (744)
...+ .+. .++++|+++.++|..++...|+++|++++.+++ ...+...+..-.....+..+.+++.+
T Consensus 377 ~~~~-----~v~-------~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 444 (710)
T 2xdw_A 377 LEVG-----SVV-------GYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPS 444 (710)
T ss_dssp CCSS-----EEE-------EEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCCTTCCGGGEEEEEEEEEC
T ss_pred CCCC-----EEE-------EEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEC
T ss_conf 9982-----699-------9855899987999992799999799998898951318966066677472106899999996
Q ss_pred CCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH-CCEEEEECCCCCCCC
Q ss_conf 7990899999918999999999930999987998746565784358988667899325899985-881999669988778
Q 004574 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIG 568 (744)
Q Consensus 490 ~~g~~l~~~~~~P~~~~~~~~~~~p~vi~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gy~v~~~~~~~~~g 568 (744)
.+|.+++++++.|+++..+ ++.|+||++||++.... ..........|++ +||+|+.++.++..+
T Consensus 445 ~dg~~i~~~~~~p~~~~~~--~~~P~vl~~hGg~~~~~-------------~~~~~~~~~~l~~~~G~~v~~~d~rG~g~ 509 (710)
T 2xdw_A 445 KDGTKIPMFIVHKKGIKLD--GSHPAFLYGYGGFNISI-------------TPNYSVSRLIFVRHMGGVLAVANIRGGGE 509 (710)
T ss_dssp TTSCEEEEEEEEETTCCCS--SCSCEEEECCCCTTCCC-------------CCCCCHHHHHHHHHHCCEEEEECCTTSST
T ss_pred CCCCEEEEEEEECCCCCCC--CCCCEEEEECCCCCCCC-------------CCCCCHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 8997988999956888778--99658999859997768-------------87616999999984991999982488787
Q ss_pred CCCC-----------CHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 9998-----------80778999999999849989982799992657999999999599911399972588899888776
Q 004574 569 EGDK-----------LPNDSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG 637 (744)
Q Consensus 569 ~g~~-----------~~~~d~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~ 637 (744)
+|.. ...+|+.++++++.+++.++++|++++|+|+||++++.++.++|++|+++|+.+|+.+.......
T Consensus 510 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~ 589 (710)
T 2xdw_A 510 YGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKY 589 (710)
T ss_dssp THHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGS
T ss_pred CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHCCCC
T ss_conf 78679874565358753999999999999859998002899998999999999987396524699976885147665666
Q ss_pred -----CCCCCCCH--HHCHHHHHHCCCCCCCC-----CCCC-CEEEEEECCCCCCCCCHHHHHHHHHHHHHC-------C
Q ss_conf -----31111440--01178898549011037-----8999-899996099997789979999999999949-------9
Q 004574 638 -----FQTEFRTL--WEATNVYIEMSPITHAN-----KIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGH-------G 697 (744)
Q Consensus 638 -----~~~~~~~~--~~~~~~~~~~~~~~~~~-----~i~~-P~li~~G~~D~~v~~~~~~~~~~~~~l~~~-------g 697 (744)
+..+...+ .+..+.+..++|+.++. ++++ |+|++||++|.+|+ +.++.+++++|+.. +
T Consensus 590 ~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~ 667 (710)
T 2xdw_A 590 TIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVV--PLHSLKFIATLQYIVGRSRKQN 667 (710)
T ss_dssp TTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSC--THHHHHHHHHHHHHTTTSTTCC
T ss_pred CCCHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEECCCCCCC--HHHHHHHHHHHHHHHCCCCCCC
T ss_conf 78703787679978899999998719375540313346778847999838999668--5689999999974320225799
Q ss_pred CCEEEEEECCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCC
Q ss_conf 948999908999326754-538899999999999961679
Q 004574 698 ALSRLVLLPFEHHVYAAR-ENVMHVIWETDRWLQKYCLSN 736 (744)
Q Consensus 698 ~~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~fl~~~l~~~ 736 (744)
.+++++++++++|++... ....+....+++||.++|+..
T Consensus 668 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 707 (710)
T 2xdw_A 668 NPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNID 707 (710)
T ss_dssp SCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 6789999499986897877789999999999999874883
No 10
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=1.00 E-value=1 Score=400.59 Aligned_cols=576 Identities=13% Similarity=0.081 Sum_probs=392.6
Q ss_pred CEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEECC---CCCEECCCCCCC--CCCCCCCCCEEEECCCCEEEEEECCCC
Q ss_conf 224367987489964125444567895259999779---886010446999--400241132288329708999933999
Q 004574 35 FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE---TGEAKPLFESPD--ICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (744)
Q Consensus 35 ~p~~SpDG~~iaf~~~~~~~~~~~~~~~~i~~~~~~---gg~~~~lt~~~~--~~~~~~~~~~~wspDg~~l~~~~~~~~ 109 (744)
.+..+|||++++|+.... ......||+++.. +++.++|+.... ......+..+.|||||++|+|.+...+
T Consensus 111 ~~~p~pdG~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G 185 (741)
T 1yr2_A 111 FGLPQRRGASVFYSWNSG-----LMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGG 185 (741)
T ss_dssp ECCCEEETTEEEEEEECS-----SCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETT
T ss_pred CCCCEEECCEEEEEEECC-----CCEEEEEEEECCCCCCCCCCEEEECHHHHCCCCCEEEEEEEECCCCCEEEEEECCCC
T ss_conf 678878799999999869-----973779999867766899877998778926589779976899999998999976899
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEEEECC-CCCEEECCCC-CEEEEECCCCCCC
Q ss_conf 9999877789999054337875101221213478920010001230117999858-9970452898-4155301089986
Q 004574 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQK 187 (744)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~G~~~~l~~~-~~~~~~~~SpDG~ 187 (744)
.+ ..+|+++|+ +|+..+.... .....++|||| +
T Consensus 186 ~e--------------------------------------------~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~ 220 (741)
T 1yr2_A 186 SD--------------------------------------------WRTVKFVGVADGKPLADELKWVKFSGLAWLGN-D 220 (741)
T ss_dssp CS--------------------------------------------EEEEEEEETTTCCEEEEEEEEEESCCCEESTT-S
T ss_pred CC--------------------------------------------EEEEEEEECCCCCCCCCCCCCCEECCEEEECC-C
T ss_conf 72--------------------------------------------68999999999989876477815665899799-9
Q ss_pred EEEEEEEECCCC-CCCCCCCCCCEEEEEECCCCEE--EECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEC
Q ss_conf 699998107743-3235678850089990799701--1203789888887556885578985311038996399998213
Q 004574 188 YVLITSMHRPYS-YKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (744)
Q Consensus 188 ~i~~~~~~~~~~-~~~~~~~~~~~i~~~~~~g~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~spDg~~~l~~~~~~~ 264 (744)
.|+|.+...... ..........+||++++.+... +.+...+... .....+.|||||+. |++.+...
T Consensus 221 ~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~----------~~~~~~~~SpDG~~-l~~~~~~~ 289 (741)
T 1yr2_A 221 ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELP----------KRGHGASVSSDGRW-VVITSSEG 289 (741)
T ss_dssp EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCT----------TCEEEEEECTTSCE-EEEEEECT
T ss_pred EEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHCEEEECCCCCC----------EEEEEEEECCCCCE-EEEEEECC
T ss_conf 89999756755666444478997899998899933288994568997----------48999998899999-99999826
Q ss_pred CCCCCCCCCCCCEEEECCCCCCCCC--C-CEEEEEECCCEECEEECCCCCEEEEEEEEECCCEEEEEECCCCCCCCCEEE
Q ss_conf 8998766786661895259999999--9-618654054210025615995178865411255249997499999863451
Q 004574 265 RGDANVEVSPRDIIYTQPAEPAEGE--K-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (744)
Q Consensus 265 ~~~~~~~~~~~~~i~~~~~~~~~~~--~-~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l 341 (744)
.. ....||++++ +++ + .+.|+........+ ++|||+.|++.++......+|++++++++....+.+
T Consensus 290 ~~-------~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l 358 (741)
T 1yr2_A 290 TD-------PVNTVHVARV---TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTV 358 (741)
T ss_dssp TC-------SCCEEEEEEE---ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEE
T ss_pred CC-------CCCEEEEEEC---CCCCCCCCEEECCCCCCEEEE-EECCCCEEEEEECCCCCCCEEEEEECCCCCCCCEEE
T ss_conf 88-------8555999989---888876667942798855888-962599999998899999789998687776666899
Q ss_pred ECCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCHHHHHH
Q ss_conf 00455554699999864508899868998632288631999814788889997617999668996568730341022230
Q 004574 342 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET 421 (744)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 421 (744)
+......+. .++|+ +..|++.... .....|+++++.++..+.+...... .
T Consensus 359 ~~~~~~~l~------~~~~~--~~~lv~~~~~------------------dg~~~l~~~~~~g~~~~~l~~~~~~----~ 408 (741)
T 1yr2_A 359 VPESKDNLE------SVGIA--GNRLFASYIH------------------DAKSQVLAFDLDGKPAGAVSLPGIG----S 408 (741)
T ss_dssp ECCCSSEEE------EEEEE--BTEEEEEEEE------------------TTEEEEEEEETTSCEEEECBCSSSC----E
T ss_pred ECCCCCEEE------EEEEE--CCEEEEEEEE------------------CCEEEEEEEECCCCCEEECCCCCCE----E
T ss_conf 648988588------99999--9999999998------------------9999999995787842541599980----7
Q ss_pred EEEEECCCCCEECCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEE
Q ss_conf 13421388620013478899999936888865999978999524642289999996787508999984799089999991
Q 004574 422 AVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYL 501 (744)
Q Consensus 422 ~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~i~~~~~~g~~l~~~~~~ 501 (744)
+. .++++||++.++|..++...|+++|++++.+++.+.++..+. ......+..+.+++.+.+|.+++++++.
T Consensus 409 v~-------~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~~~~-~~~~~~~~~~~~~~~~~dg~~i~~~~~~ 480 (741)
T 1yr2_A 409 AS-------GLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEPVHL-TFDPADFRVEQVFYPSKDGTKVPMFIVR 480 (741)
T ss_dssp EE-------EEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSCCCC-SSCGGGEEEEEEEEECTTSCEEEEEEEE
T ss_pred EE-------EEECCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCC-CCCHHHCEEEEEEEECCCCCEEEEEEEE
T ss_conf 99-------851478998799998689989989999899992799864777-8886688799999996799789999994
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCC---------
Q ss_conf 89999999999309999879987465657843589886678993258999858819996699887789998---------
Q 004574 502 PPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK--------- 572 (744)
Q Consensus 502 P~~~~~~~~~~~p~vi~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gy~v~~~~~~~~~g~g~~--------- 572 (744)
|++. .++.|+||++||++.... ..........|+++||+|+.++.++..++|..
T Consensus 481 p~~~----~~~~p~vl~~hGg~~~~~-------------~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~ 543 (741)
T 1yr2_A 481 RKDA----KGPLPTLLYGYGGFNVAL-------------TPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDK 543 (741)
T ss_dssp ETTC----CSCCCEEEECCCCTTCCC-------------CCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGG
T ss_pred CCCC----CCCCCEEEEECCCCCCCC-------------CCCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHC
T ss_conf 4888----999768999878987668-------------88768999999979969999936887877878987455424
Q ss_pred --CHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC-C----CCCCCCCH
Q ss_conf --8077899999999984998998279999265799999999959991139997258889988877-6----31111440
Q 004574 573 --LPNDSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF-G----FQTEFRTL 645 (744)
Q Consensus 573 --~~~~d~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~-~----~~~~~~~~ 645 (744)
...+|+.++++++.+++.++++||+++|+|+||++++.++.++|++|+++|+.+|+.+...... . +..+...+
T Consensus 544 ~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~ 623 (741)
T 1yr2_A 544 KQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYWVDDYGYP 623 (741)
T ss_dssp THHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGGHHHHCCT
T ss_pred CCCCHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCHHHHHCCCC
T ss_conf 87719999999999998699885777999889899999999874914314899647954212356788873368876998
Q ss_pred H--HCHHHHHHCCCCCCCCC-CCC-CEEEEEECCCCCCCCCHHHHHHHHHHHHH---CCCCEEEEEECCCCCCCCCC-CC
Q ss_conf 0--11788985490110378-999-89999609999778997999999999994---99948999908999326754-53
Q 004574 646 W--EATNVYIEMSPITHANK-IKK-PILIIHGEVDDKVGLFPMQAERFFDALKG---HGALSRLVLLPFEHHVYAAR-EN 717 (744)
Q Consensus 646 ~--~~~~~~~~~~~~~~~~~-i~~-P~li~~G~~D~~v~~~~~~~~~~~~~l~~---~g~~~~~~~~~~~~H~~~~~-~~ 717 (744)
. +..+.+..++|+.++.. +++ |+|++||++|.+|+ +.++.+++++|+. .+.+++++++++++|++... ..
T Consensus 624 ~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~ 701 (741)
T 1yr2_A 624 EKEADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVV--PGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDK 701 (741)
T ss_dssp TSHHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSC--THHHHHHHHHHHHSCCCSSCEEEEEC---------CHHH
T ss_pred CCHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCCC--HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHH
T ss_conf 898999999872936455105888877999528999788--669999999975452189988999969998178777778
Q ss_pred HHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 8899999999999961679999
Q 004574 718 VMHVIWETDRWLQKYCLSNTSD 739 (744)
Q Consensus 718 ~~~~~~~~~~fl~~~l~~~~~~ 739 (744)
..+....+.+||.++|+....+
T Consensus 702 ~~~~~~~~~~fl~~~l~~~~~~ 723 (741)
T 1yr2_A 702 QIEETADVQAFLAHFTGLTPRP 723 (741)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCC
T ss_conf 9999999999999972899600
Done!