BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004581
(744 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q969X6|CIR1A_HUMAN Cirhin OS=Homo sapiens GN=CIRH1A PE=1 SV=1
Length = 686
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 185/757 (24%), Positives = 312/757 (41%), Gaps = 158/757 (20%)
Query: 5 GGRLFSSSIDGSVSEWDLYDLKQKIVLQSIDFSIWQMAVAPSNSSLMHAVTNSDHIGNGY 64
G RLFS+ ++G + E+DL L K + + IW MA +PS S L+
Sbjct: 71 GQRLFSAGLNGEIMEYDLQALNIKYAMDAFGGPIWSMAASPSGSQLL------------- 117
Query: 65 LNDKSNDSDDHETSESENDSDSDELHEQSVVEDRRVALACDDGCVRIYRITDSDELIYHR 124
+ C+DG V++++IT D++ + R
Sbjct: 118 -------------------------------------VGCEDGSVKLFQIT-PDKIQFER 139
Query: 125 SLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCI- 183
+ R R+LS++W G + +GS D YI +D K G ++++ V +G CI
Sbjct: 140 NFDRQKSRILSLSWHPSGTHIAAGSID-YISVFDVKSGSAVHKMIVDRQYMGVSKRKCIV 198
Query: 184 WSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDG 243
W + L GT++S DS G VQFWDS GTL+++H DV ++A A + ++G
Sbjct: 199 WGVAFLSDGTIISVDSAGKVQFWDSATGTLVKSHLIANADVQSIAVADQEDSFVVGTAEG 258
Query: 244 QVILYKASCESIGPNDGLSSSEVIKKWIYVGSVRAHTHDVRALTVAVPISREDPLPEDKV 303
V ++ + P ++S+ K+W+ + HTHDVR +
Sbjct: 259 TVFHFQ-----LVP---VTSNSSEKQWVRTKPFQHHTHDVRTV----------------- 293
Query: 304 KRSRGREKPIDFSYHKWAHLGVPMLISAGDDTKLFAYCANEFTKFSPHEICPAPQRVPIH 363
AH LIS G DT L E + ++ P H
Sbjct: 294 -----------------AH-SPTALISGGTDTHLVFRPLMEKVEVKNYDAALRKITFP-H 334
Query: 364 LVHNTIFSHTSLLLVQYSCRLDILSVRLENNVESRSSSGG---HASTSLLVQVKSKASRK 420
+ LLL Q++ L++ RL + V + + + L+ +K+K
Sbjct: 335 RCLISCSKKRQLLLFQFAHHLELW--RLGSTVATGKNGDTLPLSKNADHLLHLKTKGPEN 392
Query: 421 IICSTISNSGMLFAYSDHVKPSLFELKKGKVGQGEWIINKR--QLPRKLQFAHSMIFSYD 478
IICS IS G AYS + L+ L + + I KR ++P L+ A ++FS D
Sbjct: 393 IICSCISPCGSWIAYSTVSRFFLYRLNY----EHDNISLKRVSKMPAFLRSALQILFSED 448
Query: 479 SSQLIIAGHDRRIYVVDVSSSELLHTFTPCREEHDREIQPSEPPITKMF---TSSDGQWL 535
S++L +A + +++V +S +H QP + M S DG WL
Sbjct: 449 STKLFVASNQGALHIVQLSGGSF---------KHLHAFQPQSGTVEAMCLLAVSPDGNWL 499
Query: 536 AAVNCFGDVYIFNLEIQRQHWFISRLEGASVTAAGFPPQNNNVLIITTSSNQVYVFDVEA 595
AA V+++N++ + H + VTA P NN L+I S QV+ + +
Sbjct: 500 AASGTSAGVHVYNVKQLKLHCTVPAY-NFPVTAMAIAPNTNN-LVIAHSDQQVFEYSIPD 557
Query: 596 KQLGEWSMQ------HTFVLPRRYQEFPGEVIGLSFSPSPSSSSVIIYSARAMCVIDFGR 649
KQ +WS H L R + +SF P ++++ A C+ID
Sbjct: 558 KQYTDWSRTVQKQGFHHLWLQRD-----TPITHISFHPK-RPMHILLHDAYMFCIIDKSL 611
Query: 650 PVDPDDETDMVSGQGSALRKIASTPINGRLKRKLRDCQTESNKLHGRK--NFEFFAFRDP 707
P+ P+D+T + + P N ES+ + R F+ P
Sbjct: 612 PL-PNDKTLLYN---------PFPPTN------------ESDVIRRRTAHAFKISKIYKP 649
Query: 708 VLFIGHLSKSSMLIIDKPWLEVVKTFDAPVHRHIYGT 744
+LF+ L + +++ +++P +++ P+ + +GT
Sbjct: 650 LLFMDLLDERTLVAVERPLDDIIAQLPPPIKKKKFGT 686
>sp|Q8R2N2|CIR1A_MOUSE Cirhin OS=Mus musculus GN=Cirh1a PE=2 SV=3
Length = 686
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 190/768 (24%), Positives = 309/768 (40%), Gaps = 180/768 (23%)
Query: 5 GGRLFSSSIDGSVSEWDLYDLKQKIVLQSIDFSIWQMAVAPSNSSLMHAVTNSDHIGNGY 64
G RLFS+ ++G + E+DL L K L + IW M +PS S L+
Sbjct: 71 GQRLFSAGLNGEILEYDLQALNIKYTLDAFGGPIWSMTASPSGSQLL------------- 117
Query: 65 LNDKSNDSDDHETSESENDSDSDELHEQSVVEDRRVALACDDGCVRIYRITDSDELIYHR 124
+ C+DG V+++ +T +++ + R
Sbjct: 118 -------------------------------------VGCEDGSVKLFEVT-PEKIQFAR 139
Query: 125 SLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCI- 183
+ R R+LS+ W G + +GS D YI +D K G I ++ + LG CI
Sbjct: 140 NFDRQKSRILSLCWHPAGTHVAAGSLD-YISVFDVKSGSIIRKMVLDRQHLGVTKSRCIV 198
Query: 184 WSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDG 243
W + L GT++S DS G VQ WDS GTL+++H DV ++A A + ++G
Sbjct: 199 WGVAFLSDGTVISVDSVGKVQLWDSATGTLVKSHLVANADVQSIAVADQEDSFVVGTAEG 258
Query: 244 QVILYKASCESIGPNDGLSSSEVIKKWIYVGSVRAHTHDVRALTVAVPISREDPLPEDKV 303
V ++ ++S+ K+W+ + HTHDVRA+
Sbjct: 259 TVFHFQLV--------SMTSNSSEKQWVRTKPFQHHTHDVRAV----------------- 293
Query: 304 KRSRGREKPIDFSYHKWAHLGVPMLISAGDDTKLFAYCANEFTKFSPHEICPAPQRVPIH 363
AH LIS G DT L I P +RV +
Sbjct: 294 -----------------AH-SPTALISGGTDTHLV--------------IRPLMERVEVK 321
Query: 364 ----LVHNTIFSHTSLLLVQYSCRLDILSVRLENNVE-----SRSSSGGHAST------- 407
+ F H L+ S R +L + +++E S S++G + T
Sbjct: 322 NYDAALRKITFPHRR--LISCSKRRQLLLFQFAHHLELWRLGSTSATGKNGDTLPLSKNA 379
Query: 408 SLLVQVKSKASRKIICSTISNSGMLFAYSDHVKPSLFELKKGKVGQGEWIINKRQLPRKL 467
L+ +K+K IICS +S G AYS + L+ LK + ++K LP L
Sbjct: 380 DHLLHLKTKGPENIICSCVSPCGSWIAYSTASRFFLYRLKYERDNISLQRVSK--LPSFL 437
Query: 468 QFAHSMIFSYDSSQLIIAGHDRRIYVVDVSSSEL--LHTFTPCREEHDREIQPSEPPITK 525
+ A ++FS DS++L++A + +++V +S LHTF QP +
Sbjct: 438 RSALHILFSEDSTKLLVASNQGSLHIVHLSEGSFKHLHTF-----------QPQSGTVEA 486
Query: 526 MF---TSSDGQWLAAVNCFGDVYIFNLEIQRQHWFISRLEGASVTAAGFPPQNNNVLIIT 582
M S DG WLAA V++++L + H + VTA P NN L+I
Sbjct: 487 MCLLAVSPDGNWLAASGTSAGVHVYDLHHLKLHCTVPAY-NFPVTALAIAPNTNN-LVIA 544
Query: 583 TSSNQVYVFDVEAKQLGEWSMQ------HTFVLPRRYQEFPGEVIGLSFSPSPSSSSVII 636
S QV+ F + KQ EWS H L R + +SF P +++
Sbjct: 545 HSDQQVFEFSIPEKQYTEWSRSLQKQGFHQLWLQRD-----TPITHISFHPK-RPMHILL 598
Query: 637 YSARAMCVIDFGRPVDPDDETDMVSGQGSALRKIASTPINGRLKRKLRDCQTESNKLHGR 696
+ A C+ID P+ P+++T + + P LR HG
Sbjct: 599 HDAYMFCIIDKSLPL-PNEKTVLYN----------PLPPKNESDVFLR------RTTHG- 640
Query: 697 KNFEFFAFRDPVLFIGHLSKSSMLIIDKPWLEVVKTFDAPVHRHIYGT 744
F+ P+LF+ L + +++ +++P +++ P+ + +GT
Sbjct: 641 --FKMSKIYKPLLFMDLLDERTLVAVERPLDDIIAQLPPPIKKKKFGT 686
>sp|O60161|UTP4_SCHPO U3 small nucleolar RNA-associated protein 4 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=utp4 PE=3 SV=1
Length = 710
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 160/675 (23%), Positives = 284/675 (42%), Gaps = 111/675 (16%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELI-YHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYI 154
E + +A+ CDDG ++ I+ +I + R L R + R+LS+ + + L G +DG I
Sbjct: 121 ETKTLAVGCDDGSCVLFDISGGPGVIEFKRVLMRQTSRILSLDFQTK-DHLVGGCADGVI 179
Query: 155 RSWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLL 214
+ WD + + G IW++ SLR GT+VSADS+G+V+FW+ + TL
Sbjct: 180 KVWDLSTPNSAIISRMQVDRARKGEAALIWAVKSLRDGTIVSADSSGAVKFWNGKFFTLS 239
Query: 215 QAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKASCESIGPNDGLSSSEVIKKWIYVG 274
Q+ H D L + + + VFS+G D + I Y S ++W+
Sbjct: 240 QSFKLHLADALCLGVSANGDMVFSSGIDRKTIQY-------------SREGGKREWVSNS 286
Query: 275 SVRAHTHDVRALTVAVPISREDPLPEDKVKRSRGREKPIDFSYHKWAHLGVPMLISAGDD 334
R H+HDVR + V K +D +LIS G D
Sbjct: 287 FRRFHSHDVRCMAVF-------------------ECKSLD------------VLISGGMD 315
Query: 335 TKLFAYCANEFTKFSPHEICPAPQRVPIHLVHNTIFSHTSLLLVQYSCRLDILSVRLENN 394
L +F + + I PQR + V RL L N+
Sbjct: 316 MMLAVIPVRQFNRKNHRMISAVPQR--------------PRMAVAPKARL----FMLWND 357
Query: 395 VESRSSSGGHASTSLLVQVKSKASRKIICSTISNSGMLFAYSDHVKPSLFELKKGKVGQG 454
E G L+++ I + IS G L A S ++ L++L+
Sbjct: 358 HEVLLWRIGSPGYRFLLKIVLADEENISHAAISPDGELIAISSVLRTKLYQLQYSDENVK 417
Query: 455 EWIINKRQLPRKLQFAHSMI-FSYDSSQLIIAGHDRRIYVVDVS--SSELLHTFTPCREE 511
+ L S++ F+ D ++LI+ +D I+++++S S L F +
Sbjct: 418 VETVEDSFLS---NIGASLLSFTVDKNKLILVSNDSEIFLIELSRLDSRQLEVF-ELSQP 473
Query: 512 HDREIQPSEPP--------ITKMFTSSDGQWLAAVNCFGDVYIFNL------EIQRQHWF 557
++I P + I + SSDG + A + G+++ ++L E+ R + +
Sbjct: 474 TSKKIAPRQRSNVSSMCDGICSIAVSSDGDYFAVADTVGNIFCYSLSNLTYSELPRVNTY 533
Query: 558 ISRLEGASVTAAGFPPQNNNVLIITTSSNQVYVFDVEAKQLGEWSMQHTFVLPRRYQEFP 617
V A F P L + T+ NQVY FDV++++L EWS ++ +P+ + +
Sbjct: 534 --------VRAMAFRPDVRGRLAVATAGNQVYEFDVQSRKLSEWSKNNSTNMPKEFSQLL 585
Query: 618 GEVIGLSFSPSPSSSSVIIYSARAMCVIDFGRPVDPDDETDMVSGQGSALRKI-ASTPIN 676
+ G +F S S I+SA + D + + + + RKI + ++
Sbjct: 586 DKAFG-AFFDSKHPSRFWIWSANWVSFFDL--------NLQLPAPRAAGKRKIEMNATVD 636
Query: 677 GRLK-RKLRDCQTESNKLHGRKNFEFF----AFRDPVLFIGHLSKSSMLIIDKPWLEVV- 730
G L +KL + + +G + F +R P+L +G + S +L++++P +++
Sbjct: 637 GNLNDKKLANANSNGISNYGTGDSRCFWITHKYR-PMLLVGSVGNSELLVVERPIADMLM 695
Query: 731 -KTFDAPVHRHIYGT 744
K+ A + H +G+
Sbjct: 696 SKSMPASFYEHKFGS 710
>sp|Q06679|UTP4_YEAST U3 small nucleolar RNA-associated protein 4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP4 PE=1
SV=1
Length = 776
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 131/579 (22%), Positives = 241/579 (41%), Gaps = 104/579 (17%)
Query: 99 RVALACDDGCVRIYRITDSDELIYHRS-LPRVSGRVLSVTWSADGNMLYSGSSDGYIRSW 157
++++ CD+G V + I+ ++ H + L R RVL++ W D + + G SDG IR W
Sbjct: 155 KLSVGCDNGTVVLIDISGGPGVLEHDTILMRQEARVLTLAWKKD-DFVIGGCSDGRIRIW 213
Query: 158 -----DAKLGYEIYRITVGLGGLGSGPELCIWSLLSL-RCGTLVSADSTGSVQFWDSRHG 211
D +G ++ + V S +WS++ L R + S DSTGS++FWD +
Sbjct: 214 SAQKNDENMGRLLHTMKVDKAKKEST---LVWSVIYLPRTDQIASGDSTGSIKFWDFQFA 270
Query: 212 TLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKASCESIGPNDGLSSSEVIKKWI 271
TL Q+ H DV L +N VFS G D ++ + + N+ +W+
Sbjct: 271 TLNQSFKAHDADVLCLTTDTDNNYVFSAGVDRKIFQFSQNTNKSQKNN---------RWV 321
Query: 272 YVGSVRAHTHDVRALTVAVPISREDPLPEDKVKRSRGREKPIDFSYHKWAHLGVPMLISA 331
+ H +D+RA+ + G L+S
Sbjct: 322 NSSNRLLHGNDIRAICA-------------------------------YQSKGADFLVSG 350
Query: 332 GDDTKLFAYCANEFTKFSPHEICPAPQRVPIHLVHNTIFSHTSLLLVQYS-CRLDILSVR 390
G + L N T FS P P N + + L+V +S + I ++
Sbjct: 351 GVEKTL---VINSLTSFSNGNYRKMPTVEPYS--KNVLVNKEQRLVVSWSESTVKIWTMG 405
Query: 391 LENNVESRSSSGGHASTSLLVQVKSKASRKIICSTISNSGMLFAYSDHVKPSLFELKKGK 450
+++ E + L+ ++ K + I ++S G + +F L+
Sbjct: 406 TDSSTEQ--------NYKLVCKLTLKDDQNISTCSLSPDGQVLVVGRPSTTKVFHLQ--P 455
Query: 451 VGQGEWIINKRQLPRKLQFAHSMIFSYDSSQLIIAGHDRRIYVVDVSSSELLHTFTPCRE 510
VG + + K L+ + ++ D+S+++I + +++VD+ S E +
Sbjct: 456 VG-NKLKVTKLDNDLLLRTSTKLVKFIDNSKIVICSCEDDVFIVDLESEE---------D 505
Query: 511 EHDREIQPSE----------PPITKMFTSSDGQWLAAVN--CFGDVYIFNLEIQRQHWFI 558
E +E++ E P I ++ Q +A ++ C G V I +L+ R +
Sbjct: 506 EKPQEVELLEVTSTKSSIKVPYINRINHLEVDQNIAVISRGC-GVVDILDLK-ARISKPL 563
Query: 559 SRLEGASVTAAGFPPQNNNVLIITTSSNQVYVFDV----EAKQ------LGEWSMQHTFV 608
+RL +TA +V++I T+ N++Y F++ EA+ L +WS +T
Sbjct: 564 ARLNNF-ITAVHINTSRKSVVVI-TADNKIYEFNMNLNSEAENEDSESVLTQWSKNNTDN 621
Query: 609 LPRRYQEFPGEVIGLSFSPSPSSSSVIIYSARAMCVIDF 647
LP+ ++ +G+ FS +SS + + A + IDF
Sbjct: 622 LPKEWKTLKENCVGI-FSDIENSSRLWFWGATWISRIDF 659
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ +RVA DD ++I+ D+ ++L G V SV +S DG + SGS D I+
Sbjct: 1020 DGQRVASGSDDKTIKIW---DTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIK 1076
Query: 156 SWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADST-GSVQFWDSRHGTLL 214
WDA G T L G G +WS+ G V++ S G+++ WD+ GT
Sbjct: 1077 IWDAVSG----TCTQTLEGHGDS----VWSVAFSPDGQRVASGSIDGTIKIWDAASGTCT 1128
Query: 215 QAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKAS 251
Q H G V+++A +P RV S DG + ++ A+
Sbjct: 1129 QTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAA 1165
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 24/250 (9%)
Query: 5 GGRLFSSSIDGSVSEWDLYDLKQKIVLQSIDFSIWQMAVAPSNSSLMHAVTNSDHIGNGY 64
G R+ S S D ++ WD L+ S+W +A +P + + +G
Sbjct: 979 GQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSP----------DGQRVASGS 1028
Query: 65 LNDKSNDSDDHETSESENDSDSDELHEQSVV---EDRRVALACDDGCVRIYRITDSDELI 121
+DK+ D + + QSVV + +RVA DD ++I+ D+
Sbjct: 1029 -DDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIW---DAVSGT 1084
Query: 122 YHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPEL 181
++L V SV +S DG + SGS DG I+ WDA G T L G G
Sbjct: 1085 CTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASG----TCTQTLEGHGGWVHS 1140
Query: 182 CIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGS 241
+S R + S G+++ WD+ GT Q H G V ++A +P RV S S
Sbjct: 1141 VAFSPDGQR---VASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS 1197
Query: 242 DGQVILYKAS 251
D + ++ +
Sbjct: 1198 DKTIKIWDTA 1207
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 26/250 (10%)
Query: 5 GGRLFSSSIDGSVSEWDLYDLKQKIVLQSIDFSIWQMAVAPSNSSLMHAVTNSDHIGNGY 64
G R+ S S D ++ WD L+ S+W +A +P + + + +G
Sbjct: 853 GQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSP----------DRERVASGS 902
Query: 65 LNDKSNDSDDHETSESENDSDSDELHEQSVV---EDRRVALACDDGCVRIYRITDSDELI 121
+DK+ D + + QSV + +RVA DD ++I+ D+
Sbjct: 903 -DDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIW---DAASGT 958
Query: 122 YHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPEL 181
++L VLSV +S DG + SGS D I+ WD G T L G G
Sbjct: 959 CTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASG----TCTQTLEGHGGS--- 1011
Query: 182 CIWSLLSLRCGTLVSADSTG-SVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTG 240
+WS+ G V++ S +++ WD+ GT Q H G V ++ +P RV S
Sbjct: 1012 -VWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGS 1070
Query: 241 SDGQVILYKA 250
D + ++ A
Sbjct: 1071 DDHTIKIWDA 1080
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ +RVA DG ++I+ D+ ++L G V SV +S DG + SGS DG I+
Sbjct: 1104 DGQRVASGSIDGTIKIW---DAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIK 1160
Query: 156 SWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQ 215
WDA G T L G G + +S R + S S +++ WD+ GT Q
Sbjct: 1161 IWDAASG----TCTQTLEGHGGWVQSVAFSPDGQR---VASGSSDKTIKIWDTASGTCTQ 1213
Query: 216 AHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKAS 251
H G V ++A +P RV S SD + ++ +
Sbjct: 1214 TLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTA 1249
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 133 VLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSL-LSLRC 191
VLSV +SADG + SGS D I+ WD G + G GG +WS+ S
Sbjct: 844 VLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLE-GHGG-------SVWSVAFSPDR 895
Query: 192 GTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKAS 251
+ S +++ WD+ GT Q H G V ++A +P RV S D + ++ A+
Sbjct: 896 ERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAA 955
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 95 VEDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYI 154
+ +RVA DD ++I+ D+ ++L G V SV +S D + SGS D I
Sbjct: 851 ADGQRVASGSDDKTIKIW---DTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTI 907
Query: 155 RSWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLL 214
+ WDA G T L G G + +S R + S +++ WD+ GT
Sbjct: 908 KIWDAASG----TCTQTLEGHGGRVQSVAFSPDGQR---VASGSDDHTIKIWDAASGTCT 960
Query: 215 QAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKAS 251
Q H V ++A +P RV S D + ++ +
Sbjct: 961 QTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTA 997
Score = 36.6 bits (83), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 23/173 (13%)
Query: 5 GGRLFSSSIDGSVSEWDLYDLKQKIVLQSIDFSIWQMAVAPSNSSLMHAVTNSDHIGNGY 64
G R+ S SIDG++ WD L+ + +A +P + + +G
Sbjct: 1105 GQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSP----------DGQRVASGS 1154
Query: 65 LNDKSNDSDDHETSESENDSDSDELHE---QSVV---EDRRVALACDDGCVRIYRITDSD 118
++ D + S + + E H QSV + +RVA D ++I+ D+
Sbjct: 1155 IDGTIKIWD----AASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIW---DTA 1207
Query: 119 ELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVG 171
++L G V SV +S DG + SGSSD I+ WD G + VG
Sbjct: 1208 SGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASGTCTQTLNVG 1260
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Query: 100 VALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDA 159
VA DG R++ + E H L + V +V +S DG+M+ SGS DG IR WD
Sbjct: 558 VASGSRDGTARLWNVATGTE---HAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDV 614
Query: 160 KLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSF 219
G E + P + SL G+++ S +V WD G L
Sbjct: 615 ATGKERDVL--------QAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEG 666
Query: 220 HKGDVNALAAAPSHNRVFSTGSDGQVI 246
H V A+A +P + ++GSD + I
Sbjct: 667 HTDWVRAVAFSPD-GALLASGSDDRTI 692
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 5 GGRLFSSSIDGSVSEWDLYDLKQKIVLQSIDFSIWQMAVAPSNSSLMHAVTNSDHIGNGY 64
G + S S DG++ WD+ K++ VLQ+ ++ +A +P S L+H ++ H+ +
Sbjct: 597 GSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVA 656
Query: 65 LNDKSNDSDDHETSESENDSDSDELHEQSVVEDRR-VALACDDGCVRIYRITDSDELIYH 123
+ + + H +D + + D +A DD +R++ + +E H
Sbjct: 657 SGEALHTFEGH----------TDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEE---H 703
Query: 124 RSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSW 157
+L + V SV + +G L S S DG IR W
Sbjct: 704 TTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIW 737
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 78/200 (39%), Gaps = 40/200 (20%)
Query: 74 DHETSESENDSDSDELHEQSVVEDRRVALAC-------------DDGCVRIYRITDSDEL 120
D T+ SE+ +D EL+E ++ R A+A D + ++ + DEL
Sbjct: 436 DSSTAPSES-ADPHELNEPRILTTDREAVAVAFSPGGSLLAGGSGDKLIHVWDVASGDEL 494
Query: 121 IYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKL--------GYEIYRITVGL 172
+L + V +V +S DG +L SGS D +R WD G+ Y + +
Sbjct: 495 ---HTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAF 551
Query: 173 GGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPS 232
GS + S G+ + W+ GT H V A+A +P
Sbjct: 552 SPDGS---------------MVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPD 596
Query: 233 HNRVFSTGSDGQVILYKASC 252
+ V S DG + L+ +
Sbjct: 597 GSMVASGSRDGTIRLWDVAT 616
Score = 33.5 bits (75), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 17/109 (15%)
Query: 472 SMIFSYDSSQLIIAGHDRRIYVVDVSSSELLHTFTPCREEHDREIQPSEPPITKMFTSSD 531
S+ FS D S +++ G D +++ DV+S E LHTF E H ++ + S D
Sbjct: 632 SLAFSPDGS-MLVHGSDSTVHLWDVASGEALHTF----EGHTDWVR-------AVAFSPD 679
Query: 532 GQWLAAVNCFGDVYIFNLEIQRQHWFISRLEGAS--VTAAGFPPQNNNV 578
G LA+ + + ++++ Q +H + LEG + V + F P+ +
Sbjct: 680 GALLASGSDDRTIRLWDVAAQEEH---TTLEGHTEPVHSVAFHPEGTTL 725
>sp|Q6NLV4|FY_ARATH Flowering time control protein FY OS=Arabidopsis thaliana GN=FY
PE=1 SV=1
Length = 647
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 21/246 (8%)
Query: 5 GGRLFSSSIDGSVSEWDLYDLKQKIVLQSIDFSIWQMAVAPSNSSLMHAVTNSDHIGNGY 64
G RL + S G + W+ +++LQ+ D I M V N + M V+ D Y
Sbjct: 135 GRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSM-VWSHNENYM--VSGDDGGTLKY 191
Query: 65 LNDKSNDSDDHETSESENDSDSDELHEQSVVEDRRVALACDDGCVRIYRITDSDELIYHR 124
+ N+ ++T+ E+ D D + DD V+++ T + +
Sbjct: 192 WQNNMNNVKANKTAHKESIRDLS-----FCKTDLKFCSCSDDTTVKVWDFT---KCVDES 243
Query: 125 SLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIW 184
SL V SV W ++L SG D ++ WD + G E+ + G + +
Sbjct: 244 SLTGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSL--------HGHKNIVL 295
Query: 185 SLLSLRCGT-LVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTG-SD 242
S+ + G L++A ++ +D R LQ+ H DV +LA P H F +G SD
Sbjct: 296 SVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSD 355
Query: 243 GQVILY 248
G + +
Sbjct: 356 GSICHW 361
>sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b
PE=2 SV=1
Length = 477
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 73/184 (39%), Gaps = 44/184 (23%)
Query: 100 VALACDDGCVRIY---RITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRS 156
+A A D VR++ R S E H + V SV +SADG L + S D I+
Sbjct: 75 LASASRDKTVRLWVLDRKGKSSEFKAH------TAPVRSVDFSADGQFLVTASEDKSIKV 128
Query: 157 WDA---KLGYEIYRITVGLGGLGSGPE------------LCIWSLLSLRC---------- 191
W + Y +YR T + P+ + IW S +C
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGF 188
Query: 192 ---------GTLV-SADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGS 241
GT + SA S +V+ WD R LLQ + H VN L+ PS N + + S
Sbjct: 189 ANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASS 248
Query: 242 DGQV 245
DG V
Sbjct: 249 DGTV 252
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 21/169 (12%)
Query: 97 DRRVALAC-DDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
D R+ ++C +D ++I+ T + + G V +S +G + S SD +R
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTSKQCV---NNFSDSVGFANFVDFSPNGTCIASAGSDHAVR 211
Query: 156 SWDAKLG-----YEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRH 210
WD ++ Y+++ + G+ L P +LV+A S G+V+ D
Sbjct: 212 IWDIRMNRLLQHYQVH--SCGVNCLSFHPS----------GNSLVTASSDGTVKILDLVE 259
Query: 211 GTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKASCESIGPND 259
G L+ H G V ++ + S G+D QV++++ S + D
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRTSFNQVHYRD 308
>sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium
discoideum GN=tupA PE=2 SV=1
Length = 579
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 61/150 (40%), Gaps = 41/150 (27%)
Query: 133 VLSVTWSADGNMLYSGSSDGYIRSWDAKLGY----------EIYRITVGLGG--LGSG-- 178
V SV S DG ++ +GS D +R WDA+ GY +Y + G L SG
Sbjct: 418 VTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSL 477
Query: 179 -PELCIWSL------------------------LSLRCGTLVSADSTGSVQFWDSRHGTL 213
L +W L S L+S SVQFWD R+GT
Sbjct: 478 DKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTT 537
Query: 214 LQAHSFHKGDVNALAAAPSHNR--VFSTGS 241
HK V ++A +P +N VF+TGS
Sbjct: 538 HMMLQGHKNSVISVALSPKNNSHGVFATGS 567
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 39/155 (25%)
Query: 133 VLSVTWSADGNMLYSGSSDGYIRSWDAK--------LGYE--IYRITVGLGGL----GSG 178
+ SV +S DGN L +G+ D ++ WD G+E IY + G GSG
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 179 PELC-IWSLLSLRC-----------------------GTLVSADSTGS-VQFWDSRHGTL 213
+ IW + +C G LV+A S + V+ WD++ G
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYF 449
Query: 214 LQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILY 248
L+ + H V ++A +P + S D + L+
Sbjct: 450 LERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLW 484
>sp|P87141|MIP1_SCHPO WD repeat-containing protein mip1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mip1 PE=1 SV=1
Length = 1313
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 107 GCVRIYRITDSDELIYHRSLP-RVSGRVLSVTWSADG-NMLYSGSSDGYIRSWDAKLGYE 164
G VR+ RI D+ + I + +LP R S + S+T G N++ +G SDG +R +D +L
Sbjct: 1108 GDVRVIRIWDASKEICYANLPVRSSNSITSLTSDLVGCNIIVAGFSDGVLRVYDKRLPA- 1166
Query: 165 IYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDV 224
R ++ E+ + S L+SA S G V+ WD R LQ S +
Sbjct: 1167 --RDSLTDVWKEHSSEIVNVEMQSSGMRELISASSDGEVKLWDIRMNHSLQTFSTDNSGL 1224
Query: 225 NALAAAPSHNRVFSTGSDGQVI 246
+L SH V++TGS Q I
Sbjct: 1225 TSLTVH-SHAPVYATGSSNQSI 1245
>sp|Q9C270|PWP2_NEUCR Periodic tryptophan protein 2 homolog OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=B18D24.40 PE=3 SV=1
Length = 899
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ +R+ DDG ++++ D++ + + + + +S GN+L++ S DG IR
Sbjct: 350 DGQRIVTVADDGKIKVW---DTESGFCIVTFTEHTSGITACEFSKKGNVLFTSSLDGSIR 406
Query: 156 SWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLR-CGTLVSADSTGS--VQFWDSRHGT 212
+WD + Y +R + PE +S +++ G +V+A S S + W + G
Sbjct: 407 AWDL-IRYRNFRTF-------TAPERLSFSCMAVDPSGEIVAAGSVDSFDIHIWSVQTGQ 458
Query: 213 LLQAHSFHKGDVNALAAAPSHNRVFSTGSD 242
LL S H+G V++LA AP+ + S D
Sbjct: 459 LLDRLSGHEGPVSSLAFAPNGGLLVSGSWD 488
>sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1
SV=1
Length = 478
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 35/148 (23%)
Query: 133 VLSVTWSADGNMLYSGSSDGYIRSWDA---KLGYEIYRITVGLGGLGSGPE--------- 180
V SV +SADG L + S D I+ W + Y +YR T + P+
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 181 ---LCIWSLLSLRC-------------------GTLV-SADSTGSVQFWDSRHGTLLQAH 217
+ IW + +C GT + SA S +V+ WD R LLQ +
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 224
Query: 218 SFHKGDVNALAAAPSHNRVFSTGSDGQV 245
H G VN ++ PS N + + SDG +
Sbjct: 225 QVHSGGVNCISFHPSGNYLITASSDGTL 252
Score = 40.0 bits (92), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 97 DRRVALAC-DDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
D R+ ++C +D ++I+ T+ + + G V ++ G + S SD ++
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCV---NNFSDSVGFANFVDFNPSGTCIASAGSDQTVK 211
Query: 156 SWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQ 215
WD ++ + V GG+ CI L++A S G+++ D G L+
Sbjct: 212 VWDVRVNKLLQHYQVHSGGVN-----CI--SFHPSGNYLITASSDGTLKILDLLEGRLIY 264
Query: 216 AHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKASCESI 255
H G V ++ + S G+D QV+L++ + + +
Sbjct: 265 TLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 304
>sp|Q5RD06|POC1B_PONAB POC1 centriolar protein homolog B OS=Pongo abelii GN=POC1B PE=2
SV=1
Length = 451
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 35/148 (23%)
Query: 133 VLSVTWSADGNMLYSGSSDGYIRSWD---AKLGYEIYRITVGLGGLGSGPE--------- 180
V SV +SADG L + S D I+ W + Y +YR T + P+
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 181 ---LCIWSLLSLRC-------------------GTLV-SADSTGSVQFWDSRHGTLLQAH 217
+ IW + +C GT + SA S +V+ WD R LLQ +
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 224
Query: 218 SFHKGDVNALAAAPSHNRVFSTGSDGQV 245
H G VN ++ PS N + + SDG +
Sbjct: 225 QVHSGGVNCISFHPSDNYLVTASSDGTL 252
Score = 39.7 bits (91), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 97 DRRVALAC-DDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
D R+ ++C +D ++I+ T+ + + G V ++ G + S SD ++
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCV---NNFSDSVGFANFVDFNPSGTCIASAGSDQTVK 211
Query: 156 SWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQ 215
WD ++ + V GG+ CI LV+A S G+++ D G L+
Sbjct: 212 VWDVRVNKLLQHYQVHSGGVN-----CI--SFHPSDNYLVTASSDGTLKILDLLEGRLIY 264
Query: 216 AHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKASCESI 255
H G V ++ + S G+D QV+L++ + + +
Sbjct: 265 TLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 304
>sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=1
SV=1
Length = 476
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 73/184 (39%), Gaps = 44/184 (23%)
Query: 100 VALACDDGCVRIY---RITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRS 156
+A A D VR++ R S E H + V SV +SADG +L + S D I+
Sbjct: 75 LASASRDRTVRLWVLDRKGKSSEFKAH------TAPVRSVDFSADGQLLVTASEDKSIKV 128
Query: 157 WDA---KLGYEIYRITVGLGGLGSGPE------------LCIWSLLSLRC---------- 191
W + Y +YR T + P+ + IW + +C
Sbjct: 129 WSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 192 ---------GTLV-SADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGS 241
GT + SA S +V+ WD R LLQ + H VN L+ P N + + S
Sbjct: 189 ANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASS 248
Query: 242 DGQV 245
DG V
Sbjct: 249 DGTV 252
Score = 40.8 bits (94), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 89/210 (42%), Gaps = 26/210 (12%)
Query: 97 DRRVALAC-DDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
D R+ ++C +D ++I+ T+ + + G V ++ +G + S SD ++
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCV---NNFSDSVGFANFVDFNPNGTCIASAGSDHAVK 211
Query: 156 SWDAKLG-----YEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRH 210
WD ++ Y+++ + G+ L P +LV+A S G+V+ D
Sbjct: 212 IWDIRMNKLLQHYQVH--SCGVNCLSFHP----------LGNSLVTASSDGTVKMLDLIE 259
Query: 211 GTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKAS-----CESIGPNDGLSSSE 265
G L+ H G V ++ + + S G+D QV++++ + C+ N E
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRTNFIHLHCKDPKRNLKRLHFE 319
Query: 266 VIKKWIYVGSVRAHTHDVRALTVAVPISRE 295
+ + H+H+ R T+ + RE
Sbjct: 320 ASPHLLDIYPRSPHSHEDRKETIEINPKRE 349
>sp|Q54ZP5|WDR48_DICDI WD repeat-containing protein 48 homolog OS=Dictyostelium discoideum
GN=DDB_G0277533 PE=3 SV=1
Length = 1172
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 133 VLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCG 192
+ S+ + D + + SGS++ IR WD + G +I++ L G + + S RC
Sbjct: 565 IYSLAIAQDASFVVSGSTERAIRGWDVRSGQKIFK----LKGHTDNIRSILLNDNSTRC- 619
Query: 193 TLVSADSTGSVQFWDSRHGTLLQA-HSFHKGDVNALAAAPSHNRVFSTGSDGQVIL 247
+SA S G+V+ WD +Q H V LA S + FS G DG + L
Sbjct: 620 --LSASSDGTVRLWDIGEQRCIQVFDDLHTDSVWTLATNDSFSHFFSGGRDGMIFL 673
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 6/129 (4%)
Query: 133 VLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRIT----VGLGGLGSGPELCIW--SL 186
V S+ ++ ++LYS D I+S+ G I G S + W L
Sbjct: 157 VNSLAYNHRKSILYSAGRDSTIKSYQIGGGDNDNDINEKNEYGFKFKKSFNDHTDWVNDL 216
Query: 187 LSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVI 246
LVS S +++ W++ + + FH V LA AP N S+G D +
Sbjct: 217 FFNDSNILVSCSSDSTIKIWNTDSERCVNSLKFHDDYVKVLAYAPKANYFASSGLDSHIK 276
Query: 247 LYKASCESI 255
++ S SI
Sbjct: 277 IWDLSICSI 285
>sp|A2CEH0|POC1B_DANRE POC1 centriolar protein homolog B OS=Danio rerio GN=poc1b PE=2 SV=1
Length = 490
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ +R+ A DD V+++ + + + +Y SL R + V +S DG ++ S D +R
Sbjct: 113 DGQRLVTASDDKSVKVWGV-ERKKFLY--SLNRHTNWVRCARFSPDGRLIASCGDDRTVR 169
Query: 156 SWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQ 215
WD ++ I GG + + S C AD+T ++ WD R L+Q
Sbjct: 170 LWDTS-SHQCINIFTDYGGSATFVDFNS----SGTCIASSGADNT--IKIWDIRTNKLIQ 222
Query: 216 AHSFHKGDVNALAAAPSHNRVFSTGSDGQV 245
+ H VN + PS N + S SD +
Sbjct: 223 HYKVHNAGVNCFSFHPSGNYLISGSSDSTI 252
>sp|Q54S79|WDR3_DICDI WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum
GN=wdr3 PE=3 SV=1
Length = 942
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 106 DGCVRIYRITDSD-ELIY--HRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLG 162
DG +RI+ ++D + ++ HR G V ++T++ GN+L SGS D + WD
Sbjct: 80 DGSIRIWSMSDYQLQAVFNGHR------GSVTTMTFNRLGNILVSGSKDTEVIVWDIITE 133
Query: 163 YEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKG 222
++R+ G ++ LL R L+++ G ++ WD+ +Q H+
Sbjct: 134 SGLFRLR------GHRDQITSVKLLE-RSNHLITSSKDGFIKIWDTETQHCIQTIVGHRN 186
Query: 223 DVNALAAAPSHNRVFSTGSDGQVILYKASCESIGPNDG 260
+ + P R+ S SD Q+ ++ DG
Sbjct: 187 PIWGIDVNPDETRLCSCTSDNQIRFWRIPSNERQREDG 224
>sp|Q5JTN6|WDR38_HUMAN WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1
Length = 314
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 16/169 (9%)
Query: 131 GRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLR 190
G V S +S DG ML +GS DG + W+ + G ++R LGG + C S
Sbjct: 22 GEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWR----LGGHTGPVKFC---RFSPD 74
Query: 191 CGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKA 250
SA +V+ WD L+ H+ V ++ +P ++ S G D +V+L+
Sbjct: 75 GHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDV 134
Query: 251 SCES-----IGPNDGLSSSEV--IKKWIYVGSVRAHTH--DVRALTVAV 290
+G D + SS+ + GS + H D+R +T AV
Sbjct: 135 QSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAV 183
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 104 CDDGC-VRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLG 162
CD C VR++ + L+ R S V V +S DG +L S +D ++ W + G
Sbjct: 660 CDTDCHVRVWEVKSGKLLLICRGH---SNWVRFVVFSPDGEILASCGADENVKLWSVRDG 716
Query: 163 YEIYRITVGLGGLGSGPELCIWSLLSLRCG-TLVSADSTGSVQFWDSRHGTLLQAHSFHK 221
I +T G E ++S+ G TL SA +++ WD + GT LQ + H
Sbjct: 717 VCIKTLT--------GHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHT 768
Query: 222 GDVNALAAAPSHNRVFSTGSDGQVILYKAS 251
V +A +P N + S+ +D + L+ S
Sbjct: 769 DWVRCVAFSPDGNTLASSAADHTIKLWDVS 798
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 21/240 (8%)
Query: 8 LFSSSIDGSVSEWDLYDLKQKIVLQSIDFSIWQMAVAPSNSSLMHAVTNSDHIGNGYLND 67
L S S D +V WD K L+ I+ +A +P + +L A T+S + L +
Sbjct: 951 LASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDS----SVRLWN 1006
Query: 68 KSNDSDDHETSESENDSDSDELHEQSVVEDRRVALACDDGCVRIYRITDSDELIYHRSLP 127
S E + + H Q + +A D V+++ I+ L ++L
Sbjct: 1007 ISTGQCFQILLEHTDWVYAVVFHPQGKI----IATGSADCTVKLWNISTGQCL---KTLS 1059
Query: 128 RVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLL 187
S ++L + WS DG +L S S+D +R WD G + G+ G ++S +
Sbjct: 1060 EHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCV--------GILRGHSNRVYSAI 1111
Query: 188 SLRCGTLVSADSTG-SVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVI 246
G +++ ST +V+ WD + G L+ + H V +A +P ++ ++ S Q +
Sbjct: 1112 FSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPD-GKILASASHDQTV 1170
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 100 VALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDA 159
+A A D ++++ I D L ++L + V V +S DGN L S ++D I+ WD
Sbjct: 741 LASASGDKTIKLWDIQDGTCL---QTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDV 797
Query: 160 KLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSF 219
G + + G + S S TL S +++ W+ G L+ +
Sbjct: 798 SQGKCLRTLKSHTGWVRS-------VAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIG 850
Query: 220 HKGDVNALAAAPSHNRVFSTGSDGQVILY 248
H V ++A +P + S D + L+
Sbjct: 851 HTNSVYSIAYSPDSKILVSGSGDRTIKLW 879
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 100 VALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDA 159
+A + D ++++ ++ L R+L +G V SV +SADG L SGS D I+ W+
Sbjct: 783 LASSAADHTIKLWDVSQGKCL---RTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNY 839
Query: 160 KLGYEIYRITVG----LGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQ 215
G E + +G + + P+ I LVS +++ WD + ++
Sbjct: 840 HTG-ECLKTYIGHTNSVYSIAYSPDSKI----------LVSGSGDRTIKLWDCQTHICIK 888
Query: 216 AHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKA 250
H +V ++A +P + D V L+
Sbjct: 889 TLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNC 923
Score = 33.5 bits (75), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 13/145 (8%)
Query: 110 RIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEI---Y 166
R ++ D I ++L + V SV +S DG L S D +R W+ + G + Y
Sbjct: 874 RTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWY 933
Query: 167 RITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNA 226
T + P+ I L S + +V+ WD + G + + H +
Sbjct: 934 GNTDWALPVAFSPDRQI----------LASGSNDKTVKLWDWQTGKYISSLEGHTDFIYG 983
Query: 227 LAAAPSHNRVFSTGSDGQVILYKAS 251
+A +P + S +D V L+ S
Sbjct: 984 IAFSPDSQTLASASTDSSVRLWNIS 1008
Score = 33.5 bits (75), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 97 DRRVALACD-DGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
D + +C D V+++ + D + ++L V SV + DG L S S D I+
Sbjct: 695 DGEILASCGADENVKLWSVRDG---VCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIK 751
Query: 156 SWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQ 215
WD + G + +T + C+ S TL S+ + +++ WD G L+
Sbjct: 752 LWDIQDGTCLQTLTGHTDWV-----RCV--AFSPDGNTLASSAADHTIKLWDVSQGKCLR 804
Query: 216 AHSFHKGDVNALAAAPSHNRVFSTGSDGQVILY 248
H G V ++A + + S D + ++
Sbjct: 805 TLKSHTGWVRSVAFSADGQTLASGSGDRTIKIW 837
>sp|P26308|GBB1_DROME Guanine nucleotide-binding protein subunit beta-1 OS=Drosophila
melanogaster GN=Gbeta13F PE=1 SV=1
Length = 340
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 100 VALACDDGCVRIYRI-TDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWD 158
VA D IY + T + R LP G LS D N + + S D WD
Sbjct: 112 VACGGLDNMCSIYNLKTREGNVRVSRELPGHGG-YLSCCRFLDDNQIVTSSGDMSCGLWD 170
Query: 159 AKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHS 218
+ G ++ T LG G L L+ +C T VS S + WD R G Q
Sbjct: 171 IETGLQV---TSFLGHTGDVMALS----LAPQCKTFVSGACDASAKLWDIREGVCKQTFP 223
Query: 219 FHKGDVNALAAAPSHNRVFSTGSD 242
H+ D+NA+ P + + F+TGSD
Sbjct: 224 GHESDINAVTFFP-NGQAFATGSD 246
>sp|Q5RFF8|NLE1_PONAB Notchless protein homolog 1 OS=Pongo abelii GN=NLE1 PE=2 SV=3
Length = 485
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 122/319 (38%), Gaps = 59/319 (18%)
Query: 133 VLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLL--SLR 190
VLS++WS DG L SG +G I WD G ++ R G +G W L +
Sbjct: 159 VLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLS---WEPLHANPE 215
Query: 191 CGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKA 250
C + S+ GSV+ WD+ G + + H V L G DG +LY A
Sbjct: 216 CRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCL----------RWGGDG--LLYSA 263
Query: 251 SCESIGPNDGLSSSEVIKKW-----IYVGSVRAHTHDVRALTV----AVPISREDPL--- 298
S IK W + +++ H H V + + A+ +P
Sbjct: 264 -----------SQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEAS 312
Query: 299 --PEDKVKRSRGREKPIDFSYHKWAHLGVPMLISAGDDTKLFAYCANE----FTKFSPHE 352
P+D + ++ Y+ G L+S DD LF + E T+ + H+
Sbjct: 313 VNPQDLQGSLQELKERALSRYNLMRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQ 372
Query: 353 ICPAPQRVPIHLVHNTIFSHTSLLLVQYSCRLDILSVRLENNVESRSSSGGHASTSLLVQ 412
L++ +FS S ++ S D S++L + + + + + Q
Sbjct: 373 A----------LINQVLFSPDSRIVA--SASFDK-SIKLWDGRTGKYLASLRGHVAAVYQ 419
Query: 413 VKSKASRKIICSTISNSGM 431
+ A +++ S S+S +
Sbjct: 420 IAWSADSRLLVSGSSDSTL 438
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ R VA A D ++++ D Y SL V + WSAD +L SGSSD ++
Sbjct: 383 DSRIVASASFDKSIKLW---DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 439
Query: 156 SWDAK 160
WD K
Sbjct: 440 VWDVK 444
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
Query: 124 RSLPRVSGR---VLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPE 180
+ L R++G + V +S D ++ S S D I+ WD + G + L G +
Sbjct: 363 KPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG----KYLASLRGHVAAVY 418
Query: 181 LCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTG 240
WS S LVS S +++ WD + L H +V A+ +P RV S G
Sbjct: 419 QIAWSADSR---LLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGG 475
Query: 241 SDGQVILYK 249
D + +++
Sbjct: 476 KDKCLRIWR 484
>sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b
PE=2 SV=1
Length = 470
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 26/151 (17%)
Query: 103 ACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAK-- 160
A DD ++ + + +Y SL + V +S DG ++ S S D +R WD
Sbjct: 120 ASDDKSIKAWNL-HRQRFLY--SLTEHTNWVRCARFSPDGRLIASCSDDKTVRIWDITNR 176
Query: 161 ------LGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLL 214
+ Y+ + V +G+ C DST V+ WD R LL
Sbjct: 177 LCINTFVDYKGHSNYVDFNPMGT-------------CVASAGVDST--VKVWDIRTNKLL 221
Query: 215 QAHSFHKGDVNALAAAPSHNRVFSTGSDGQV 245
Q + H VN+L+ PS N + + +DG V
Sbjct: 222 QHYQVHNAGVNSLSFHPSGNYLLTASNDGTV 252
Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 14/156 (8%)
Query: 98 RRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSW 157
R +A DD VRI+ IT+ + + G V ++ G + S D ++ W
Sbjct: 157 RLIASCSDDKTVRIWDITNR---LCINTFVDYKGHSNYVDFNPMGTCVASAGVDSTVKVW 213
Query: 158 DAKLGYEIYRITVGLGGLGSGPELCIWSLLSLR--CGTLVSADSTGSVQFWDSRHGTLLQ 215
D + + V G+ S LS L++A + G+V+ D G L+
Sbjct: 214 DIRTNKLLQHYQVHNAGVNS---------LSFHPSGNYLLTASNDGTVKILDLLEGRLIY 264
Query: 216 AHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKAS 251
H+G V ++A + S ++ S +D QV+++K +
Sbjct: 265 TLHGHQGPVLSVAFSKSGDQFASGATDAQVLVWKTN 300
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 100 VALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDA 159
+A A D VR++ D + + +P S + S++++ DGN + + S DG IR WDA
Sbjct: 312 IASAGFDETVRVW---DFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDA 368
Query: 160 KLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSF 219
G + + + + + S L+SA S++ WD + L+ ++
Sbjct: 369 ASGSCLKTL------VDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKYYNG 422
Query: 220 HKGDVNALAA---APSHNRVFSTGSDGQVILYKASCESI 255
HK L A P + S DG+++++ + I
Sbjct: 423 HKNKKYCLFANMSVPLGKHIISGSEDGRILVWSIQTKQI 461
>sp|Q7ZVF0|POC1A_DANRE POC1 centriolar protein homolog A OS=Danio rerio GN=poc1a PE=2 SV=1
Length = 416
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 138 WSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSA 197
+S DG ++ S S D ++ WDA ++ GG S + S C S+
Sbjct: 152 FSPDGQLMVSVSDDRTVKLWDAS-SRQLIHTFCEPGGYSSYVDF----HPSSTCIATASS 206
Query: 198 DSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSD 242
D+T V+ WD R TLLQ + H VNAL+ PS N + + SD
Sbjct: 207 DNT--VRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSD 249
>sp|Q95RJ9|EBI_DROME F-box-like/WD repeat-containing protein ebi OS=Drosophila
melanogaster GN=ebi PE=1 SV=2
Length = 700
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 42/200 (21%)
Query: 100 VALACDDGCVRIYRITD----SDELIYHRSLPRVSGRV------LSVTWSADGNMLYSGS 149
+A D RI+ ++D S++L+ + + V S+ W+ DG++L +GS
Sbjct: 370 LASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGS 429
Query: 150 SDGYIRSW--DAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGT-LVSADSTGSVQFW 206
DGY R W D +L + G GP I++L +CG ++SA + W
Sbjct: 430 YDGYARIWKTDGRLASTL--------GQHKGP---IFALKWNKCGNYILSAGVDKTTIIW 478
Query: 207 DSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKASCESIGPNDGLSSSEV 266
D+ G Q +FH AL N+ F++ S Q I C L +E
Sbjct: 479 DASTGQCTQQFAFHS--APALDVDWQTNQAFASCSTDQRIHV---CR-------LGVNEP 526
Query: 267 IKKWIYVGSVRAHTHDVRAL 286
IK + + HT++V A+
Sbjct: 527 IK------TFKGHTNEVNAI 540
>sp|Q4V7Z1|POC1B_XENLA POC1 centriolar protein homolog B OS=Xenopus laevis GN=poc1b PE=1
SV=1
Length = 468
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 26/151 (17%)
Query: 103 ACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAK-- 160
A DD ++ + + L SL + + V +S DG ++ S S D +R WD
Sbjct: 120 ASDDKSIKAWNLHRQRFLF---SLTQHTNWVRCARFSPDGRLIASCSDDKTVRIWDLTNR 176
Query: 161 ------LGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLL 214
+ Y+ + V +G+ C ADST V+ WD R LL
Sbjct: 177 LCINTFVDYKGHSNYVDFNQMGT-------------CVASAGADST--VKVWDIRMNKLL 221
Query: 215 QAHSFHKGDVNALAAAPSHNRVFSTGSDGQV 245
Q + H V++L+ PS N + + SDG +
Sbjct: 222 QHYQVHNAGVSSLSFHPSGNYLLTASSDGTL 252
Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 20/173 (11%)
Query: 98 RRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSW 157
R +A DD VRI+ +T+ + + G V ++ G + S +D ++ W
Sbjct: 157 RLIASCSDDKTVRIWDLTNR---LCINTFVDYKGHSNYVDFNQMGTCVASAGADSTVKVW 213
Query: 158 DAKLGYEIYRITVGLGGLGSGPELCIWSLLSLR--CGTLVSADSTGSVQFWDSRHGTLLQ 215
D ++ + V G+ S LS L++A S G+++ D G L+
Sbjct: 214 DIRMNKLLQHYQVHNAGVSS---------LSFHPSGNYLLTASSDGTLKILDLLEGRLIY 264
Query: 216 AHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKASCESIGPNDGLSSSEVIK 268
H+G V ++ + S ++ S +D QV+++K + D S E++K
Sbjct: 265 TLHGHQGPVLSVTFSKSGDQFASGATDAQVLVWKTNF------DKYSVKEIVK 311
>sp|Q8VEJ4|NLE1_MOUSE Notchless protein homolog 1 OS=Mus musculus GN=Nle1 PE=2 SV=4
Length = 485
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 133 VLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSL--R 190
VLS++WS DG L SG +G + WD G ++ R G +G W L +
Sbjct: 159 VLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLS---WEPLHMNPE 215
Query: 191 CGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKA 250
C + S+ GSV+ WD+ G + + H V L ++S D + +++A
Sbjct: 216 CRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG-GDGLLYSASQDRTIKVWRA 274
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ R VA A D ++++ D Y SL V + WSAD +L SGSSD ++
Sbjct: 383 DSRIVASASFDKSIKLW---DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 439
Query: 156 SWDAK 160
WD K
Sbjct: 440 VWDVK 444
Score = 34.3 bits (77), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
Query: 124 RSLPRVSGR---VLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPE 180
+ L R++G + V +S D ++ S S D I+ WD + G + L G +
Sbjct: 363 KPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG----KYLASLRGHVAAVY 418
Query: 181 LCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTG 240
WS S LVS S +++ WD + L H +V A+ +P RV S G
Sbjct: 419 QIAWSADSR---LLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGG 475
Query: 241 SDGQVILYK 249
D + +++
Sbjct: 476 KDKCLRIWR 484
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 98 RRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSW 157
+ + A DD ++++ + L SL + V +S DG ++ S S D I+ W
Sbjct: 115 QSLVTASDDKTIKVWTVHRQKFLF---SLNQHINWVRCAKFSPDGRLIVSASDDKTIKLW 171
Query: 158 DAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADST-GSVQFWDSRHGTLLQA 216
D K E + GG + + GT ++A +T +V+ WD R L+Q
Sbjct: 172 D-KTSRECIQSFCEHGGFVNFVDF-------HPSGTCIAAAATDNTVKVWDIRMNKLIQH 223
Query: 217 HSFHKGDVNALAAAPSHNRVFSTGSD 242
+ H G VN+L+ PS N + + +D
Sbjct: 224 YQVHSGVVNSLSFHPSGNYLITASND 249
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 100 VALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDA 159
+A DD VR++ I+ + L +L + V SV +S DG ML SG D +R WD
Sbjct: 1047 LASGSDDQTVRLWDISSGNCLY---TLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDI 1103
Query: 160 KLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSF 219
G +Y L G S ++S + TL + S V+ WD L
Sbjct: 1104 SSGNCLYT----LQGYTSWVRFLVFSPNGV---TLANGSSDQIVRLWDISSKKCLYTLQG 1156
Query: 220 HKGDVNALAAAPSHNRVFSTGSDGQVILYKAS 251
H VNA+A +P + S D V L+ S
Sbjct: 1157 HTNWVNAVAFSPDGATLASGSGDQTVRLWDIS 1188
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 23/134 (17%)
Query: 126 LPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRI--------TVGLGGLGS 177
++ G VL+V +S DG + +G S G +R W+A G E+ +VG G
Sbjct: 860 FTKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGK 919
Query: 178 GPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVF 237
L S +V+ WD G L+ H V ++ +P+ +
Sbjct: 920 ---------------MLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLA 964
Query: 238 STGSDGQVILYKAS 251
S SD V L+ S
Sbjct: 965 SGSSDQTVRLWDIS 978
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 72/189 (38%), Gaps = 38/189 (20%)
Query: 98 RRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSW 157
+ +A DD VR++ I+ L ++ + RV SV +S + ML SGSSD +R W
Sbjct: 919 KMLASGSDDQTVRLWDISSGQCL---KTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLW 975
Query: 158 DAKLGY----------EIYRITVGLGG----LGSGPELC-IWSLLSLRC----------- 191
D G +Y + L G GSG + +W + S +C
Sbjct: 976 DISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCV 1035
Query: 192 ---------GTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSD 242
L S +V+ WD G L H V ++ +P + S G D
Sbjct: 1036 RSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDD 1095
Query: 243 GQVILYKAS 251
V L+ S
Sbjct: 1096 QIVRLWDIS 1104
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 11/147 (7%)
Query: 100 VALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDA 159
+A D VR++ I+ S L + + V SVT+S DG ML SGS D +R W
Sbjct: 1299 LASGSGDQTVRLWEISSSKCL---HTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSI 1355
Query: 160 KLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSF 219
G +Y +GS + S L S +V+ W G L
Sbjct: 1356 SSGECLYTFLGHTNWVGS-------VIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQG 1408
Query: 220 HKGDVNALAAAPSHNRVFSTGSDGQVI 246
H V ++ +P + ++GSD Q +
Sbjct: 1409 HNNWVGSIVFSPD-GTLLASGSDDQTV 1434
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 100 VALACDDGCVRIYRITDSDELIY----HRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+A D VR++ I+ S + Y H S R SV +S+DG ML SGS D +R
Sbjct: 1005 LATGSGDQTVRLWDISSS-QCFYIFQGHTSCVR------SVVFSSDGAMLASGSDDQTVR 1057
Query: 156 SWDAKLGYEIYRITVGLGGLGSGPELCIWSLL-SLRCGTLVSADSTGSVQFWDSRHGTLL 214
WD G +Y + G C+ S++ S L S V+ WD G L
Sbjct: 1058 LWDISSGNCLYTL--------QGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCL 1109
Query: 215 QAHSFHKGDVNALAAAPSHNRVFSTGSDGQVI 246
+ V L +P + + GS Q++
Sbjct: 1110 YTLQGYTSWVRFLVFSP-NGVTLANGSSDQIV 1140
Score = 37.7 bits (86), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 59/140 (42%), Gaps = 11/140 (7%)
Query: 107 GCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIY 166
G VR + EL+ + + V SV +S DG ML SGS D +R WD G
Sbjct: 886 GIVRFWEAATGKELLTCKGH---NSWVNSVGFSQDGKMLASGSDDQTVRLWDISSG---- 938
Query: 167 RITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNA 226
+ G S ++S SL L S S +V+ WD G L H G V +
Sbjct: 939 QCLKTFKGHTSRVRSVVFSPNSL---MLASGSSDQTVRLWDISSGECLYIFQGHTGWVYS 995
Query: 227 LAAAPSHNRVFSTGSDGQVI 246
+A + + +TGS Q +
Sbjct: 996 VAFNLDGS-MLATGSGDQTV 1014
Score = 37.0 bits (84), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 100 VALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDA 159
+A DD VR++ I+ S E +Y +L V SV +S+DG +L SGS D I+ WD
Sbjct: 1425 LASGSDDQTVRLWNIS-SGECLY--TLHGHINSVRSVAFSSDGLILASGSDDETIKLWDV 1481
Query: 160 KLG 162
K G
Sbjct: 1482 KTG 1484
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 100 VALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWD- 158
+A D VR++ I+ S + +Y +L + V +V +S DG L SGS D +R WD
Sbjct: 1131 LANGSSDQIVRLWDIS-SKKCLY--TLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDI 1187
Query: 159 --AKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQA 216
+K Y + T + + P+ TL S S +V+ W+ L
Sbjct: 1188 SSSKCLYILQGHTSWVNSVVFNPD----------GSTLASGSSDQTVRLWEINSSKCLCT 1237
Query: 217 HSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKAS 251
H VN++ P + + S SD V L+ S
Sbjct: 1238 FQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDIS 1272
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 28/161 (17%)
Query: 100 VALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDA 159
+A D VR++ I+ S L L + V SV ++ DG+ L SGSSD +R W+
Sbjct: 1173 LASGSGDQTVRLWDISSSKCLYI---LQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWE- 1228
Query: 160 KLGYEIYRITVGLGGLGSGPELCIWS---------LLSLRCGTLVSADSTGSVQFWDSRH 210
+ S LC + + + L S S +V+ WD
Sbjct: 1229 ---------------INSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISS 1273
Query: 211 GTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKAS 251
L H VN++A P + + S D V L++ S
Sbjct: 1274 SKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEIS 1314
>sp|Q9NVX2|NLE1_HUMAN Notchless protein homolog 1 OS=Homo sapiens GN=NLE1 PE=1 SV=4
Length = 485
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 122/319 (38%), Gaps = 59/319 (18%)
Query: 133 VLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLL--SLR 190
VLS++WS DG L SG +G I WD G ++ R G +G W L +
Sbjct: 159 VLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLS---WEPLHANPE 215
Query: 191 CGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKA 250
C + S+ GSV+ WD+ G + + H V L G DG +LY A
Sbjct: 216 CRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCL----------RWGGDG--LLYSA 263
Query: 251 SCESIGPNDGLSSSEVIKKW-----IYVGSVRAHTHDVRALTV----AVPISREDPL--- 298
S IK W + +++ H H V + + A+ +P
Sbjct: 264 -----------SQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEAS 312
Query: 299 --PEDKVKRSRGREKPIDFSYHKWAHLGVPMLISAGDDTKLFAYCANE----FTKFSPHE 352
P+D + ++ Y+ G L+S DD LF + E T+ + H+
Sbjct: 313 VNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQ 372
Query: 353 ICPAPQRVPIHLVHNTIFSHTSLLLVQYSCRLDILSVRLENNVESRSSSGGHASTSLLVQ 412
L++ +FS S ++ S D S++L + + + + + Q
Sbjct: 373 A----------LINQVLFSPDSRIVA--SASFDK-SIKLWDGRTGKYLASLRGHVAAVYQ 419
Query: 413 VKSKASRKIICSTISNSGM 431
+ A +++ S S+S +
Sbjct: 420 IAWSADSRLLVSGSSDSTL 438
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ R VA A D ++++ D Y SL V + WSAD +L SGSSD ++
Sbjct: 383 DSRIVASASFDKSIKLW---DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 439
Query: 156 SWDAK 160
WD K
Sbjct: 440 VWDVK 444
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
Query: 124 RSLPRVSGR---VLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPE 180
+ L R++G + V +S D ++ S S D I+ WD + G + L G +
Sbjct: 363 KPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG----KYLASLRGHVAAVY 418
Query: 181 LCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTG 240
WS S LVS S +++ WD + L H +V A+ +P RV S G
Sbjct: 419 QIAWSADSR---LLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGG 475
Query: 241 SDGQVILYK 249
D + +++
Sbjct: 476 KDKCLRIWR 484
>sp|Q8IZU2|WDR17_HUMAN WD repeat-containing protein 17 OS=Homo sapiens GN=WDR17 PE=2 SV=2
Length = 1322
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 100 VALACDDGCVRIYRI-TDSDELIYHRSLPRVSGRVLSVTWSA-DGNMLYSGSSDGYIRSW 157
+A C+D VR+Y + T SD+ + + + +V V WS +L SGS DG +R W
Sbjct: 537 IATGCEDTNVRVYYVATSSDQPL--KVFSGHTAKVFHVKWSPLREGILCSGSDDGTVRIW 594
Query: 158 DAKLGYEIYRI---TVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLL 214
D I + T + GL E+ L+S +++ WD+R GT +
Sbjct: 595 DYTQDACINILNGHTAPVRGLMWNTEIPY---------LLISGSWDYTIKVWDTREGTCV 645
Query: 215 QAHSFHKGDVNALAAAPSHNRVFSTGS 241
H DV L PS R F+ S
Sbjct: 646 DTVYDHGADVYGLTCHPS--RPFTMAS 670
>sp|P17343|GBB1_CAEEL Guanine nucleotide-binding protein subunit beta-1 OS=Caenorhabditis
elegans GN=gpb-1 PE=2 SV=2
Length = 340
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 124 RSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCI 183
R LP +G LS D N + + S D WD + G + T G + S
Sbjct: 137 RELPGHTG-YLSCCRFLDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLS---- 191
Query: 184 WSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSD 242
LS T +S S + WD R G Q H+ D+NA+A PS N F+TGSD
Sbjct: 192 ---LSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGN-AFATGSD 246
>sp|Q61ZF6|GBB1_CAEBR Guanine nucleotide-binding protein subunit beta-1 OS=Caenorhabditis
briggsae GN=gpb-1 PE=3 SV=1
Length = 340
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 124 RSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCI 183
R LP +G LS D N + + S D WD + G + T G + S
Sbjct: 137 RELPGHTG-YLSCCRFLDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLS---- 191
Query: 184 WSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSD 242
LS T +S S + WD R G Q H+ D+NA+A PS N F+TGSD
Sbjct: 192 ---LSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGN-AFATGSD 246
>sp|O14170|POP2_SCHPO WD repeat-containing protein pop2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pop2 PE=1 SV=1
Length = 703
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 15/143 (10%)
Query: 106 DGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEI 165
D +RI+R++ + E +YH L S R+ SV + + N+ SGS D IR WD G
Sbjct: 526 DSSIRIWRVS-TGECLYH--LRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCK 582
Query: 166 YRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVN 225
Y + G + + +LL++ L+S + +++ WD G L + G ++
Sbjct: 583 YVL--------EGHDAFV-TLLNVFQNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYIS 633
Query: 226 ALAAAPSHNRVFSTGSDGQVILY 248
+ + +++ S G+DG V L+
Sbjct: 634 SFVS--DEHKIIS-GNDGSVKLW 653
Score = 33.1 bits (74), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 11/113 (9%)
Query: 137 TWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLL-SLRCGTLV 195
T S G++L SGS D IR W G +Y + G L I+S+L +
Sbjct: 512 TISGYGDILVSGSYDSSIRIWRVSTGECLYHL--------RGHSLRIYSVLYEPERNICI 563
Query: 196 SADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILY 248
S S++ WD GT H V L NR+ S +D + ++
Sbjct: 564 SGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVF--QNRLISGSADSTIRIW 614
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 12/144 (8%)
Query: 100 VALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDA 159
+ A DD V+++ T ++ SL + V +S DG ++ S S D ++ WD
Sbjct: 118 LVTASDDKTVKVWS-THRQRFLF--SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD- 173
Query: 160 KLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADST-GSVQFWDSRHGTLLQAHS 218
K E GG + + GT ++A +V+ WD+R LLQ +
Sbjct: 174 KTSRECIHSYCEHGGFVTYVDF-------HPSGTCIAAAGMDNTVKVWDARTHRLLQHYQ 226
Query: 219 FHKGDVNALAAAPSHNRVFSTGSD 242
H VNAL+ PS N + + SD
Sbjct: 227 LHSAAVNALSFHPSGNYLITASSD 250
Score = 37.0 bits (84), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 20/169 (11%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ R + A DD V+++ T S E I+ S G V V + G + + D ++
Sbjct: 156 DGRLIVSASDDKTVKLWDKT-SRECIH--SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVK 212
Query: 156 SWDAKLG-----YEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRH 210
WDA+ Y+++ + + L P L++A S +++ D
Sbjct: 213 VWDARTHRLLQHYQLH--SAAVNALSFHPS----------GNYLITASSDSTLKILDLME 260
Query: 211 GTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKASCESIGPND 259
G LL H+G +A + + S GSD QV+++K++ + + D
Sbjct: 261 GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDYGD 309
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 21/144 (14%)
Query: 130 SGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSL 189
+ V SV + +DG L + S D ++ W ++ +T + W +
Sbjct: 103 TATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHIN----------W----V 148
Query: 190 RCGT-------LVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSD 242
RC +VSA +V+ WD + ++ H G V + PS + + G D
Sbjct: 149 RCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMD 208
Query: 243 GQVILYKASCESIGPNDGLSSSEV 266
V ++ A + + L S+ V
Sbjct: 209 NTVKVWDARTHRLLQHYQLHSAAV 232
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 100 VALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDA 159
+ A DD ++++ + L SL + V +S DG ++ S S D I+ WD
Sbjct: 117 LVTASDDKTIKVWTVHRQKFLF---SLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWD- 172
Query: 160 KLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADST-GSVQFWDSRHGTLLQAHS 218
K E GG + + GT ++A +T +V+ WD R L+Q +
Sbjct: 173 KTSRECIHSFCEHGGFVNFVDFH-------PSGTCIAAAATDNTVKVWDIRMNKLIQHYQ 225
Query: 219 FHKGDVNALAAAPSHNRVFSTGSD 242
H G VN+L+ PS N + + +D
Sbjct: 226 VHSGVVNSLSFHPSGNYLITASND 249
Score = 38.1 bits (87), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 14/166 (8%)
Query: 98 RRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSW 157
R + A DD ++++ T S E I+ S G V V + G + + ++D ++ W
Sbjct: 157 RLIVSASDDKTIKLWDKT-SRECIH--SFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVW 213
Query: 158 DAKLGYEIYRITVGLGGLGSGPELCIWSLLSLR--CGTLVSADSTGSVQFWDSRHGTLLQ 215
D ++ I V G + S LS L++A + +++ D G LL
Sbjct: 214 DIRMNKLIQHYQVHSGVVNS---------LSFHPSGNYLITASNDSTLKVLDLLEGRLLY 264
Query: 216 AHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKASCESIGPNDGL 261
H+G V ++ + S GSD QV+++K + +S D L
Sbjct: 265 TLHGHQGPVTSVKFSREGEFFASGGSDEQVMVWKTNFDSASYADLL 310
>sp|Q8VBV4|FBXW7_MOUSE F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1
SV=1
Length = 629
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 19/156 (12%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ RRV D V+++ D + +L + RV S+ + DG + SGS D IR
Sbjct: 432 DGRRVVSGAYDFMVKVW---DPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 486
Query: 156 SWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTL-- 213
WD + G I+ +T G L SG E L+ LVS ++ +V+ WD + G
Sbjct: 487 VWDVETGNCIHTLT-GHQSLTSGME--------LKDNILVSGNADSTVKIWDIKTGQCLQ 537
Query: 214 -LQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILY 248
LQ S H+ V L + N V ++ DG V L+
Sbjct: 538 TLQGPSKHQSAVTCLQF--NKNFVITSSDDGTVKLW 571
>sp|Q93794|SEL10_CAEEL F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans
GN=sel-10 PE=1 SV=3
Length = 587
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 124 RSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKL--GYEIYRITVGLGGLGSGPEL 181
R+L + RV S+ + ++ +++ SGS D IR WD G E + G L SG
Sbjct: 412 RTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSG--- 468
Query: 182 CIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGS 241
+ LR LVS ++ V+ WD GT + S H+ + +L N V ++
Sbjct: 469 -----MQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF-GRNMVATSSD 522
Query: 242 DGQVILY 248
DG V L+
Sbjct: 523 DGTVKLW 529
Score = 36.2 bits (82), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 143 NMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGT-LVSADSTG 201
++L +GS D ++ W G +Y + GG +W+ +CG +VS +
Sbjct: 267 DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGG--------VWTSQISQCGRYIVSGSTDR 318
Query: 202 SVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGS 241
+V+ W + G+LL H V +A A S + TGS
Sbjct: 319 TVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS---ILVTGS 355
Score = 33.1 bits (74), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 142 GNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTG 201
GN+L S ++D ++R WD G ++ + SG I SL + ++ G
Sbjct: 473 GNILVSCNADSHVRVWDIHEGTCVHML--------SGHRSAITSLQWFGRNMVATSSDDG 524
Query: 202 SVQFWDSRHGTLLQ 215
+V+ WD G L++
Sbjct: 525 TVKLWDIERGALIR 538
>sp|Q969H0|FBXW7_HUMAN F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1
SV=1
Length = 707
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 19/156 (12%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ RRV D V+++ D + +L + RV S+ + DG + SGS D IR
Sbjct: 510 DGRRVVSGAYDFMVKVW---DPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 564
Query: 156 SWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTL-- 213
WD + G I+ +T G L SG E L+ LVS ++ +V+ WD + G
Sbjct: 565 VWDVETGNCIHTLT-GHQSLTSGME--------LKDNILVSGNADSTVKIWDIKTGQCLQ 615
Query: 214 -LQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILY 248
LQ + H+ V L + N V ++ DG V L+
Sbjct: 616 TLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLW 649
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Query: 103 ACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLG 162
A DD V+++ T + ++ SL + V +S DG ++ S S D ++ WD K
Sbjct: 121 ASDDKTVKVWS-THRQKFLF--SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTS 176
Query: 163 YEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADST-GSVQFWDSRHGTLLQAHSFHK 221
E GG + + GT ++A +V+ WD R LLQ + H
Sbjct: 177 RECVHSYCEHGGFVTYVDF-------HPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHS 229
Query: 222 GDVNALAAAPSHNRVFSTGSD 242
VNAL+ PS N + + SD
Sbjct: 230 AAVNALSFHPSGNYLVTASSD 250
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 20/161 (12%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ R + A DD V+++ T S E ++ S G V V + G + + D ++
Sbjct: 156 DGRLIVSASDDKTVKLWDKT-SRECVH--SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVK 212
Query: 156 SWDAKLG-----YEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRH 210
WD + Y+++ + + L P LV+A S +++ D
Sbjct: 213 VWDVRTHRLLQHYQLH--SAAVNALSFHPS----------GNYLVTASSDSTLKILDLME 260
Query: 211 GTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKAS 251
G LL H+G +A + + S GSD QV+++K++
Sbjct: 261 GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
>sp|Q58D20|NLE1_BOVIN Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=3
Length = 486
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 6/120 (5%)
Query: 133 VLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLL--SLR 190
VLS++WS DG L SG +G I WD G ++ R L G W L +
Sbjct: 160 VLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGR---ALTGHSKWITALSWEPLHANPE 216
Query: 191 CGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKA 250
C + S+ GSV+ WD+ G + + H V L ++S D + +++A
Sbjct: 217 CRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWG-GDGLLYSASQDRTIKVWRA 275
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ R +A A D ++++ D Y SL V + WSAD +L SGSSD ++
Sbjct: 384 DSRVIASASFDKSIKLW---DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 440
Query: 156 SWDAK 160
WD K
Sbjct: 441 VWDVK 445
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
Query: 124 RSLPRVSGR---VLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPE 180
+ L R++G + V +S D ++ S S D I+ WD + G + L G +
Sbjct: 364 KPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTG----KYLASLRGHVAAVY 419
Query: 181 LCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTG 240
WS S LVS S +++ WD + L H +V A+ +P RV S G
Sbjct: 420 QIAWSADSR---LLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGG 476
Query: 241 SDGQVILYK 249
D + +++
Sbjct: 477 KDKCLRIWR 485
>sp|Q11176|WDR1_CAEEL Actin-interacting protein 1 OS=Caenorhabditis elegans GN=unc-78
PE=1 SV=1
Length = 611
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 106 DGCVRIYRITDSDE--LIYHRSLPRV--SGRVLSVTWSADGNMLYSGSSDGYIRSWD-AK 160
DG + +Y D + + SL V SG V +TWS DG + S S+D I+ W+ A
Sbjct: 211 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270
Query: 161 LGYEIYRITVGLGGLGSGPEL-CIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSF 219
L E T+ +G +L IW+ + LVS + G + F + G++ Q
Sbjct: 271 LKVE---KTIPVGTRIEDQQLGIIWTKQA-----LVSISANGFINFVNPELGSIDQVRYG 322
Query: 220 HKGDVNALAAAPSHNRVFSTGSDGQV 245
H + AL+++ +FS ++G +
Sbjct: 323 HNKAITALSSSADGKTLFSADAEGHI 348
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 70 NDSDDHETSESENDSDSDELHEQSVV------EDRRVALACDDGCVRIYRITDSDELIYH 123
N D +T E+DS + H SV + ++A A D ++I+ + L
Sbjct: 218 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA---TLKVE 274
Query: 124 RSLP---RVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPE 180
+++P R+ + L + W+ L S S++G+I + +LG + + G
Sbjct: 275 KTIPVGTRIEDQQLGIIWTKQA--LVSISANGFINFVNPELG--------SIDQVRYGHN 324
Query: 181 LCIWSLLSLRCG-TLVSADSTGSVQFWDSRHG 211
I +L S G TL SAD+ G + WD G
Sbjct: 325 KAITALSSSADGKTLFSADAEGHINSWDISTG 356
Score = 33.5 bits (75), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 112 YRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVG 171
Y + ++ EL + S + +V V+WS D L +GS D + W+ + I G
Sbjct: 518 YSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKG 577
Query: 172 LGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWD 207
+ S + S++ L T+VSA +++FW+
Sbjct: 578 AHAMSS-----VNSVIWLNETTIVSAGQDSNIKFWN 608
>sp|P56094|TUP1_KLULA General transcriptional corepressor TUP1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TUP1 PE=1 SV=2
Length = 682
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 10/110 (9%)
Query: 133 VLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCG 192
+ SV +S DG L +G+ D IR WD E +I + L G E I+SL G
Sbjct: 409 IRSVCFSPDGKFLATGAEDKLIRIWD----LETKKIVMTL----KGHEQDIYSLDYFPSG 460
Query: 193 T-LVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGS 241
LVS +V+ WD GT S G V +A +P + + GS
Sbjct: 461 NKLVSGSGDRTVRIWDLTTGTCSLTLSIEDG-VTTVAVSPGEGKFIAAGS 509
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Query: 140 ADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGT-LVSAD 198
+G + +GS D +R WD+ G+ + R+ LG+G ++S++ R G +VS
Sbjct: 500 GEGKFIAAGSLDRTVRVWDSDTGFLVERLD-SENELGTGHRDSVYSVVFTRDGKGVVSGS 558
Query: 199 STGSVQFWD-------SRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILY 248
SV+ W+ H ++ HK V ++A + + S D V+ +
Sbjct: 559 LDRSVKLWNLNGLSGQKSHAECEVTYTGHKDFVLSVATTQNDEYILSGSKDRGVLFW 615
>sp|Q61FW2|SEL10_CAEBR F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis
briggsae GN=sel-10 PE=3 SV=1
Length = 589
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 124 RSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKL--GYEIYRITVGLGGLGSGPEL 181
R+L S RV S+ + ++ +++ SGS D IR WD G E+ G L SG
Sbjct: 414 RTLIGHSNRVYSLLYESERSIVCSGSLDTSIRVWDFSRPEGQELIAFLSGHTSLTSG--- 470
Query: 182 CIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGS 241
+ LR LVS ++ V+ WD GT + S H+ + +L V ++
Sbjct: 471 -----MQLRGNILVSCNADSHVRVWDIYEGTCIHILSGHRSAITSLQWF-GRGLVATSSD 524
Query: 242 DGQVILY 248
DG V L+
Sbjct: 525 DGSVKLW 531
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 142 GNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTG 201
GN+L S ++D ++R WD G I+ + SG I SL G + ++ G
Sbjct: 475 GNILVSCNADSHVRVWDIYEGTCIHIL--------SGHRSAITSLQWFGRGLVATSSDDG 526
Query: 202 SVQFWDSRHGTLLQ 215
SV+ WD G L++
Sbjct: 527 SVKLWDIERGVLIR 540
>sp|Q9C0J8|WDR33_HUMAN pre-mRNA 3' end processing protein WDR33 OS=Homo sapiens GN=WDR33
PE=1 SV=2
Length = 1336
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 103/259 (39%), Gaps = 35/259 (13%)
Query: 5 GGRLFSSSIDGSVSEWDLYDLKQKIVLQSIDFSIWQMAVAPSNSSLMHAVTNSDHIGNGY 64
G RL + + G + W+ + +LQ+ D + M + ++ ++ A DH GY
Sbjct: 131 GRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTA----DH--GGY 184
Query: 65 LNDKSNDSDDHETSESENDSDSDELHEQSVVE------DRRVALACDDGCVRIYRITDSD 118
+ ++ N+ + H++++ E D + A DDG VRI+
Sbjct: 185 VKYWQSNM---------NNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCH 235
Query: 119 ELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGY--IRSWDAKLGYEIYRITVGLGGLG 176
E R L V V W ++ SGS D I+ WD K G + +
Sbjct: 236 E---ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHK---- 288
Query: 177 SGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRH-GTLLQAHSFHKGDVNALAAAPSHNR 235
+ L+L L++A + +D R+ LQ HK + A+A P H
Sbjct: 289 ---NTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 345
Query: 236 VF-STGSDGQVILYKASCE 253
+F S GSDG ++ + E
Sbjct: 346 LFASGGSDGSLLFWHVGVE 364
>sp|Q6P5M2|WDR61_DANRE WD repeat-containing protein 61 OS=Danio rerio GN=wdr61 PE=2 SV=1
Length = 305
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 26/248 (10%)
Query: 5 GGRLFSSSIDGSVSEWDLYDLKQKIVLQSIDFSIWQMAVAPSNSSLMHAVTNSDHIGNGY 64
G SSS+D + WDL KQ + + W +A +P + + H+G
Sbjct: 76 GAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSK----YIATGSHLGKVN 131
Query: 65 LNDKSNDSDDHETSESENDSDSDELHEQSVV---EDRRVALACDDGCVRIYRITDSDELI 121
+ E+ + E+ D+ S+ + + +A DG + I+ I L
Sbjct: 132 IFGV-------ESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL- 183
Query: 122 YHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPEL 181
+L + + S+T+S D +L + S DGYI+ +D + L G SG
Sbjct: 184 --HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ--------HANLAGTLSGHGS 233
Query: 182 CIWSL-LSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTG 240
+ S+ S VS+ S S++ WD+ + + H+ V ++ P+ +++ S G
Sbjct: 234 WVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAG 293
Query: 241 SDGQVILY 248
D + +Y
Sbjct: 294 DDRAIHIY 301
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 12/160 (7%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ + +A G V I+ + + SL +LS+ +S DG L SG+ DG I
Sbjct: 117 DSKYIATGSHLGKVNIFGVESGKK---EHSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173
Query: 156 SWDAKLGYEIYRITVGLGGLGSGPELCIWSL-LSLRCGTLVSADSTGSVQFWDSRHGTLL 214
+D G ++ + G + I SL S LV+A G ++ +D +H L
Sbjct: 174 IFDIATGKLLHTL--------EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA 225
Query: 215 QAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYKASCES 254
S H V ++A +P S+ SD + ++ S S
Sbjct: 226 GTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRS 265
>sp|Q6CGP9|PFS2_YARLI Polyadenylation factor subunit 2 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=PFS2 PE=3 SV=1
Length = 532
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Query: 125 SLPRVSGRVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIW 184
+L +V V S TW+ DG L +GS G W+ +T + E +
Sbjct: 140 ALNKVRHPVYSATWTPDGRRLLTGSMSGEFTLWNG--------MTFNFESIMQAHESGVR 191
Query: 185 SLLSLRCGT-LVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDG 243
SL G L+S D G+V+FW + H+ + LA APS ++ F TGSD
Sbjct: 192 SLKYSHSGEWLLSGDHEGNVKFWQPSLNCVNVIDKAHRESIRELAFAPSDHK-FVTGSDD 250
Query: 244 QVI 246
++
Sbjct: 251 GLL 253
Score = 36.6 bits (83), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 111/286 (38%), Gaps = 48/286 (16%)
Query: 5 GGRLFSSSIDGSVSEWDLYDLKQKIVLQSIDFSIWQMAVAPSNSSLMHAVTNSDHIGNGY 64
G RL + S+ G + W+ + ++Q+ + + + + S L+ + DH GN
Sbjct: 157 GRRLLTGSMSGEFTLWNGMTFNFESIMQAHESGVRSLKYSHSGEWLL----SGDHEGNVK 212
Query: 65 LNDKSNDSDDHETSESENDSDSDELHEQSVVE------DRRVALACDDGCVRIYRITDSD 118
S + + D+ H +S+ E D + DDG ++I+ +S
Sbjct: 213 FWQPSLNCVN----------VIDKAHRESIRELAFAPSDHKFVTGSDDGLLKIWDFHESS 262
Query: 119 ELIYHRSLPRVSG-RVLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEI-----YRITV-- 170
S+ + G V SV W ++ ++ SGS D I+ WD + + ++ TV
Sbjct: 263 NA---ESVLKGHGWDVKSVDWHSELGLIVSGSKDNLIKLWDPRSAKNVNTFHGFKNTVMK 319
Query: 171 ---------GLGGLGSGPELC-IWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQAHSFH 220
L G C I L L G+ + + G+ +R + H
Sbjct: 320 TTFQPTGTKRLLAAGCRDRTCRILDLRMLNSGSSEAGPTAGTDM--PTRGDRSMAVLRGH 377
Query: 221 KGDVNALAAAPSHNRVFSTGSD-GQVILYKASCE----SIGPNDGL 261
DV +L P+H V ++G+ G + + + GP+ G+
Sbjct: 378 DSDVFSLTWHPTHANVVTSGTKTGSIYTFNVDTTPAGGAYGPDSGI 423
>sp|Q8K4P0|WDR33_MOUSE pre-mRNA 3' end processing protein WDR33 OS=Mus musculus GN=Wdr33
PE=2 SV=1
Length = 1330
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 103/259 (39%), Gaps = 35/259 (13%)
Query: 5 GGRLFSSSIDGSVSEWDLYDLKQKIVLQSIDFSIWQMAVAPSNSSLMHAVTNSDHIGNGY 64
G RL + + G + W+ + +LQ+ D + M + ++ ++ A DH GY
Sbjct: 131 GRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTA----DH--GGY 184
Query: 65 LNDKSNDSDDHETSESENDSDSDELHEQSVVE------DRRVALACDDGCVRIYRITDSD 118
+ ++ N+ + H++++ E D + A DDG VRI+
Sbjct: 185 VKYWQSNM---------NNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCH 235
Query: 119 ELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGY--IRSWDAKLGYEIYRITVGLGGLG 176
E R L V V W ++ SGS D I+ WD K G + +
Sbjct: 236 E---ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHK---- 288
Query: 177 SGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRH-GTLLQAHSFHKGDVNALAAAPSHNR 235
+ L+L L++A + +D R+ LQ HK + A+A P H
Sbjct: 289 ---NTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 345
Query: 236 VF-STGSDGQVILYKASCE 253
+F S GSDG ++ + E
Sbjct: 346 LFASGGSDGSLLFWHVGVE 364
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ + +A D +++++ +D L +++ V +V +S DG L S SSD I+
Sbjct: 1124 DGQTIASGGSDKTIKLWQTSDGTLL---KTITGHEQTVNNVYFSPDGKNLASASSDHSIK 1180
Query: 156 SWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSVQFWDSRHGTLLQ 215
WD G ++ + L G +G I S T+ + +V+ W + G LL+
Sbjct: 1181 LWDTTSG----QLLMTLTGHSAG---VITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLK 1233
Query: 216 AHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYK 249
+ H+ VN+L+ +P + S +D + L++
Sbjct: 1234 TLNGHQDWVNSLSFSPDGKTLASASADKTIKLWR 1267
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 22/153 (14%)
Query: 97 DRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRS 156
D+ + L DG R++R + E V SV++S DG + SG SD I+
Sbjct: 1093 DKTIKLWSRDG--RLFRTLNGHE-----------DAVYSVSFSPDGQTIASGGSDKTIKL 1139
Query: 157 WDAKLGYEIYRITVGLGGLGSGPELCIWSL-LSLRCGTLVSADSTGSVQFWDSRHGTLLQ 215
W G + IT G E + ++ S L SA S S++ WD+ G LL
Sbjct: 1140 WQTSDGTLLKTIT--------GHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLM 1191
Query: 216 AHSFHKGDVNALAAAPSHNRVFSTGSDGQVILY 248
+ H V + +P + + D V L+
Sbjct: 1192 TLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLW 1224
Score = 41.2 bits (95), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 133 VLSVTWSADGNMLYSGSSDGYIRSW--DAKLGYEIYRITVGLGGLGSGPELCIWSL-LSL 189
V+S++ S DG + SGS D I+ W D +L +R +G E ++S+ S
Sbjct: 1075 VISISISRDGQTIASGSLDKTIKLWSRDGRL----FRTL-------NGHEDAVYSVSFSP 1123
Query: 190 RCGTLVSADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYK 249
T+ S S +++ W + GTLL+ + H+ VN + +P + S SD + L+
Sbjct: 1124 DGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWD 1183
Query: 250 AS 251
+
Sbjct: 1184 TT 1185
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 133 VLSVTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRI--TVGLGGLGSGPELCIWSLLSLR 190
V +V++ DG+++ + +DG I+ W ++ G + + + G+ P+
Sbjct: 1366 VYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIYGISFTPQ---------- 1415
Query: 191 CGTLV-SADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILYK 249
G L+ SA++ +V+ W R G L+ H +VN + +P + S D V L+
Sbjct: 1416 -GDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWN 1474
Query: 250 AS 251
S
Sbjct: 1475 VS 1476
Score = 33.5 bits (75), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 96 EDRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIR 155
+ R +A A +D V+I++I D L +LP+ V+S +S DG L SGS D +
Sbjct: 1583 DGRYIASASEDKTVKIWQI-DGHLLT---TLPQHQAGVMSAIFSPDGKTLISGSLDTTTK 1638
Query: 156 SW 157
W
Sbjct: 1639 IW 1640
>sp|P0CS46|PFS2_CRYNJ Polyadenylation factor subunit 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PFS2 PE=3 SV=1
Length = 712
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 12/153 (7%)
Query: 97 DRRVALACDDGCVRIYRITDSDELIYHRSLPRVSGRVLSVTWSADGNMLYSGSSDGYIRS 156
D R DDG V+I+ ++ E RSL V V W ++ SGS D ++
Sbjct: 228 DERFVTCGDDGLVKIWSYREAKE---ERSLSGHGWDVRCVDWHPTKGLIVSGSKDMLVKF 284
Query: 157 WDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLVSADSTGSV-QFWDSRHGTLLQ 215
WD + G ++ + + + C WS G LV+ SV + +D R L+
Sbjct: 285 WDPRTGKDLSTLHSSKSTINT----CRWSP----DGHLVATAGQDSVIRLFDIRTFRELE 336
Query: 216 AHSFHKGDVNALAAAPSHNRVFSTGSDGQVILY 248
H+ +VN + P H+ + +G I Y
Sbjct: 337 VLKGHEKEVNCIEWHPIHHSLLVSGDALGTINY 369
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 7/113 (6%)
Query: 136 VTWSADGNMLYSGSSDGYIRSWDAKLGYEIYRITVGLGGLGSGPELCIWSLLSLRCGTLV 195
V+WS + + DG ++ W Y + L G G W G +V
Sbjct: 222 VSWSPNDERFVTCGDDGLVKIWS----YREAKEERSLSGHGWDVRCVDWHPTK---GLIV 274
Query: 196 SADSTGSVQFWDSRHGTLLQAHSFHKGDVNALAAAPSHNRVFSTGSDGQVILY 248
S V+FWD R G L K +N +P + V + G D + L+
Sbjct: 275 SGSKDMLVKFWDPRTGKDLSTLHSSKSTINTCRWSPDGHLVATAGQDSVIRLF 327
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 281,583,283
Number of Sequences: 539616
Number of extensions: 11948712
Number of successful extensions: 48492
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 497
Number of HSP's that attempted gapping in prelim test: 42803
Number of HSP's gapped (non-prelim): 5807
length of query: 744
length of database: 191,569,459
effective HSP length: 125
effective length of query: 619
effective length of database: 124,117,459
effective search space: 76828707121
effective search space used: 76828707121
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)