Your job contains 1 sequence.
>004582
MGSDVAESVELPFYCTVKVHRLMCLELKTLINKISHIHSDIESARPGCTSGIHVLCSFHV
AVDKSKLLIQYCSESSKLYLAITADRIQMKFERVRNTLELCLSQIQNIVPSLLAAKVSDI
IHDIRNAKFPLEPSEDEAGKVLLALLHRGISASSFINQLELEALQLAALRLNITSPLALL
IEKRSIKRLLQKICDTDTTRKKVLKCLLYLLRKYGELICKHKTLSTHAVPKEPCHQSIEA
QAKLGNEWDENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHT
TCPKTHMRLDNVSVTPNVAIKELISQWCLKHGISIPEPHSQPMPALLSSRKTSSSSSVAS
FGSSMDDLCLHVSNVSFSSSDTDHDLHPSNGKTDDGLSCASPLKNANSHRYQSSMIRHGT
DLTSLSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAK
AQKDGAEVLLAILSQSRDEMPLFHKDEICTFALFLDSEIMEEALEIIEVLSHQQNYASEL
VASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPILS
SYCIKIIKALCTSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQ
LANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKEDNASECSTLRADMLHDSSSHHT
DNKTSSVASRFLGRKIARFLRSNH
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004582
(744 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 613 1.4e-99 2
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 632 8.3e-83 2
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 632 1.9e-81 2
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 361 7.1e-73 3
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 240 1.8e-32 3
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 270 1.3e-31 3
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 256 1.7e-28 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 240 1.8e-28 2
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 237 2.2e-28 3
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 232 1.2e-27 2
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 229 7.6e-26 3
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 240 1.1e-24 2
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 202 2.3e-21 3
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 238 1.9e-19 3
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 194 2.0e-19 3
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 172 2.8e-18 2
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 197 9.5e-18 3
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 224 1.7e-15 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 164 2.3e-15 2
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 160 2.5e-15 4
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 194 3.2e-15 3
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 155 8.4e-15 2
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 180 1.2e-14 2
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 177 1.3e-14 2
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 182 4.9e-14 2
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 173 1.2e-13 2
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 177 2.0e-13 2
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 187 6.0e-13 2
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 197 7.2e-13 2
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 141 1.1e-12 2
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 149 1.3e-12 2
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 164 5.8e-12 2
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 192 6.7e-12 2
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 152 1.9e-11 2
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 186 3.5e-11 1
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 177 3.9e-11 2
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 161 8.3e-11 2
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 152 1.0e-10 2
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 146 3.1e-10 2
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 170 1.3e-09 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 168 3.5e-09 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 156 3.1e-08 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 139 4.1e-08 2
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 145 1.4e-07 3
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 151 2.2e-07 1
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 129 2.8e-07 2
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 150 2.8e-07 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 152 3.9e-07 2
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 147 4.7e-07 1
TAIR|locus:2145653 - symbol:AT5G14510 species:3702 "Arabi... 140 2.3e-06 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 142 3.9e-06 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 138 7.9e-06 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 138 8.0e-06 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 137 1.1e-05 1
TAIR|locus:2197654 - symbol:AT1G61350 species:3702 "Arabi... 136 1.8e-05 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 134 2.2e-05 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 134 2.2e-05 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 136 2.8e-05 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 136 3.7e-05 2
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 137 7.5e-05 2
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 123 0.00012 2
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 132 0.00016 2
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 127 0.00028 1
TAIR|locus:2079716 - symbol:CHIP "carboxyl terminus of HS... 117 0.00058 1
TAIR|locus:2116792 - symbol:AT4G31890 "AT4G31890" species... 121 0.00065 1
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 613 (220.8 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 158/503 (31%), Positives = 265/503 (52%)
Query: 212 RKYGELICK-HKTLS-THAVPKEPCHQSIEAQAKLGNEWDENPVNESGVLEPPEEFKCSI 269
R+ ++IC+ HK S TH HQSI+ E +G L PE+FKC++
Sbjct: 177 RRSLKIICEDHKQNSFTH-------HQSIDDSLHANAAEAEASEEHNGTL--PEKFKCTL 227
Query: 270 SLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKELISQWCL 329
S +MYDPV+I+SG TFER+ IQKWF+ G+ +CP + +LD+ ++ PNV +K IS+WC
Sbjct: 228 SRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELKSQISEWCA 287
Query: 330 KHGISIPEPHSQPMPALLXXXXXXXXXXXXXXXXXMDDLCLHVSNVSFSSSDTDHDLHPS 389
K+G+ + +P + + A + D H S +S + ++ + + S
Sbjct: 288 KNGLDVQDPARKHVKASNSIDFSVSIASFGSSLYNIPD---H-SGISITDFNSSYSIDSS 343
Query: 390 N-GKTDDGLSCASPLKNANSHRYQSSM-IRHGT-DLTSLSKLASRPWGSQCDAVENIKKL 446
+ K G +P++ +S H ++ L L + PW +Q VE+++
Sbjct: 344 SYSKMSKG-GYFTPMQRIDSASGAGDTDSSHSEIEIDPLCGLTNLPWDAQIKVVEDVRSR 402
Query: 447 LKDNGQSRHLAFLNSYVKPLIKFLKDA--HNLCDAKAQKDGAEVLLAILSQSRDEMPLFH 504
+ + ++ + +++PLI +LK+A N + K G ++LLA LS +R +
Sbjct: 403 FEHSTRAFRSMSPSKFLEPLITYLKNALERNGTAGEIIKGGLDLLLAFLSGNRRAIESLE 462
Query: 505 KDEICTFALFLDSEIM-EEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESREL 563
++ F++FL+SE++ EEAL I+EVLS+ + S++ +SG + S++K +++ +E
Sbjct: 463 EEVFKMFSVFLESEVVAEEALNILEVLSNHPHGPSKITSSGSLSSLLKIVESQAEHLQEQ 522
Query: 564 AIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPILSSYCIKIIKALCTSE-ARAAVAES 622
A+ L NLSS I ++ LD KL L+ + + I I+K LC++E R + E+
Sbjct: 523 AMITLKNLSSSMEICLEMVSLDFIQKLTSFLQQKVFCKHSIIILKNLCSTEKGRGCITET 582
Query: 623 NPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANTES--IIQCVVDISVNGNS 680
C+ SIA+LLE+ EEQE+ + +LL LC + +YC L E+ I ++ IS NG
Sbjct: 583 PDCLASIAELLESNVPEEQENAISILLQLCVQKIEYCCLVVREATDIYSSLILISNNGTE 642
Query: 681 RGKETAKELIMLLDHCKEDNASE 703
K +A EL+ L D E
Sbjct: 643 EVKVSASELLRALVEVDSDKEEE 665
Score = 395 (144.1 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 77/170 (45%), Positives = 115/170 (67%)
Query: 18 KVHRLMCLELKTLINKISHIHSDIESARPGCTSGIHVLCSFHVAVDKSKLLIQYCSESSK 77
K+H MCLELK L+++I I DIE ARPGC+SGI LC H A+DK+K L+QYCSESSK
Sbjct: 14 KMHSSMCLELKRLVDRIMRIFPDIEDARPGCSSGIQTLCLLHNALDKTKQLLQYCSESSK 73
Query: 78 LYLAITADRIQMKFERVRNTLELCLSQIQNIVPSLLAAKVSDIIHDIRNAKFPLEPSEDE 137
LY+A+T D I + R + +LE CL+ I++IVP++L K+S I+ D+R+ + LE SE+E
Sbjct: 74 LYMAVTGDAILARGSRAKKSLEQCLNDIRSIVPTILEIKISQIVQDLRSTQLTLEFSEEE 133
Query: 138 AGKVLLALLHRGISASSFINXXXXXXXXXXXXRLNITSPLALLIEKRSIK 187
AGK + L+ + S+S+ + +L +++P A++ E+RS+K
Sbjct: 134 AGKAIRELMQKSTSSSA--SPDEIKDFHYAALKLQLSTPEAIVTERRSLK 181
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 632 (227.5 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 138/356 (38%), Positives = 214/356 (60%)
Query: 4 DVAESVELPFYCT-VKVHRLMCLELKTLINKISHIHSDIESARPGCTSGIHVLCSFHVAV 62
DV E E F + K+H MC EL ++ K+ I +E ARP SGI LCS H+A+
Sbjct: 2 DVTELEENLFAASDAKLHGDMCKELSGVLCKVLSIFPSLEGARPRSKSGIQALCSLHIAL 61
Query: 63 DKSKLLIQYCSESSKLYLAITADRIQMKFERVRNTLELCLSQIQNIVPSLLAAKVSDIIH 122
+K+K ++Q+CSE SKLYLAIT D + +KFE+ + L L ++++IVPS + +++ +I+
Sbjct: 62 EKAKNILQHCSECSKLYLAITGDAVLLKFEKAKIALIDGLKRVEDIVPSSIGSQILEIVG 121
Query: 123 DIRNAKFPLEPSEDEAGKVLLALLHRGISASSFINXXXXXXXXXXXXRLNITSPLALLIE 182
++ N +F L+PSE E G ++ALL +G + + RL+ITS L E
Sbjct: 122 ELENTRFMLDPSEKEVGDQIIALLQQGKKFDNCNDNTELEIFHRAATRLSITSSRVALAE 181
Query: 183 KRSIKRLLQKI-CDTDTTRKKVLKCLLYLLRKYGELICKHKTLSTHAVPKE-PC-----H 235
+R++K+L+ + + D ++ ++ LL+L+RK +L + + L + P PC H
Sbjct: 182 RRALKKLIDRARAEEDKRKESIVAYLLHLMRKCSKLF-RSEILDENDSPGSYPCSPNEDH 240
Query: 236 QSIEA---Q-AKLG--NEWDENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERV 289
S+ Q ++ G N+ N +N + PPEE +C ISL+LM DPV+IASG+T+ERV
Sbjct: 241 GSVHGFGRQLSRFGSLNDKPMNSINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERV 300
Query: 290 WIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKELISQWCLKHGISIPE--PHSQPM 343
I+KWF+ GH TCPKT +L ++S+TPN +K LI+ WC ++G IP P SQ +
Sbjct: 301 CIEKWFSDGHNTCPKTQQQLPHISLTPNNCVKGLIASWCEQNGTQIPSGPPESQDL 356
Score = 217 (81.4 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 74/264 (28%), Positives = 125/264 (47%)
Query: 436 QCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAI-LS 494
+C VE I+ LLKD+ ++R N +V+ L++FL A + +A AQ GA L + ++
Sbjct: 441 KCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVN 500
Query: 495 QSRDEMPLFHKDEICTFALFLDS-EIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFL 553
+R++ + I + S E A + LS S + +S +P +++ L
Sbjct: 501 NNRNKELMLTSGVIRLLEKMISSAESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLL 560
Query: 554 DTGTRESREL-AIKILCNLSSGDNIVYHILYLDCTSKLVRLLE---DPILSSYCIKIIKA 609
+L A+ L NLS+ + +L + L LL + + + ++
Sbjct: 561 QKEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLN 620
Query: 610 LCTS-EARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANTESII 668
L +S E + S I S+A +L+ G EQE V LL LC+ Q+ E +I
Sbjct: 621 LASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVI 680
Query: 669 QCVVDISVNGNSRGKETAKELIML 692
+V ISVNG RG+E +++L+ML
Sbjct: 681 PSLVSISVNGTPRGREKSQKLLML 704
Score = 70 (29.7 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
Identities = 43/175 (24%), Positives = 75/175 (42%)
Query: 530 LSHQQNYASELV-ASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTS 588
L+ N EL+ SG+I + K + + ES A + NLS D I
Sbjct: 497 LAVNNNRNKELMLTSGVIRLLEKMISSA--ESHGSATALYLNLSCLDEAKSVIGSSQAVP 554
Query: 589 KLVRLLEDPILSSYCIKIIKALCTSEARA----AVAESNPCIDSIAKLL-ETGTREEQEH 643
LV+LL+ I + + + AL + A+ SN I S+ LL TG E
Sbjct: 555 FLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSN-IIKSLQGLLASTGENLWIEK 613
Query: 644 IVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKE 698
+ VLL+L + +++ +I + + G++ +E A +++L + +E
Sbjct: 614 SLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRE 668
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 632 (227.5 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 136/350 (38%), Positives = 214/350 (61%)
Query: 4 DVAESVELPFYCT-VKVHRLMCLELKTLINKISHIHSDIESARPGCTSGIHVLCSFHVAV 62
DV+E E F + K+H MC EL + K+ I +E ARP SGI LCS H+A+
Sbjct: 2 DVSELEENLFAASDAKLHGDMCKELSAVYCKVLSIFPSLEEARPRSKSGIQTLCSLHIAL 61
Query: 63 DKSKLLIQYCSESSKLYLAITADRIQMKFERVRNTLELCLSQIQNIVPSLLAAKVSDIIH 122
+K+K ++Q+CSE SKLYLAIT D + +KFE+ ++ L L ++++IVPS + +++ DI+
Sbjct: 62 EKAKNILQHCSECSKLYLAITGDAVLLKFEKAKSALIDSLRRVEDIVPSSIGSQILDIVG 121
Query: 123 DIRNAKFPLEPSEDEAGKVLLALLHRGISASSFINXXXXXXXXXXXXRLNITSPLALLIE 182
++ + KF L+PSE E G ++ALL +G + + RL+ITS + L E
Sbjct: 122 ELEHTKFLLDPSEKEVGDRIIALLQQGKKFDNGSDSTELEIFHQAATRLSITSSRSALAE 181
Query: 183 KRSIKRLLQKI-CDTDTTRKKVLKCLLYLLRKYGELI-----------CKHKTLSTHAVP 230
+R++K+++ + + D ++ ++ LL+L+RKY +L C T P
Sbjct: 182 RRALKKVIDRARVEEDKRKESIVAYLLHLMRKYSKLFRSEMMDENDSPCSTPCSPTGQGP 241
Query: 231 KEPCHQSIEAQ-AKLGNEWDENPVN--ESGVLE-PPEEFKCSISLRLMYDPVVIASGKTF 286
E + Q +K G+ + P+N +SG + PPEE +C ISL+LMYDPV+IASG+T+
Sbjct: 242 NEDRVNAFGRQLSKFGSI-NYKPMNSRKSGQMPIPPEELRCPISLQLMYDPVIIASGQTY 300
Query: 287 ERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKELISQWCLKHGISIP 336
ERV I+KWF+ GH +CPKT +L ++S+TPN +K LI+ WC ++GI++P
Sbjct: 301 ERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVKGLIASWCEQNGITVP 350
Score = 204 (76.9 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 69/263 (26%), Positives = 128/263 (48%)
Query: 436 QCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAI-LS 494
+C VEN++ LLKDN ++R L N +V+ ++FL+ A + +A AQ+ GA L + ++
Sbjct: 441 KCKVVENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVN 500
Query: 495 QSRDEMPLFHKDEICTFALFLD-SEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFL 553
+R++ + I + S+ A + LS + + +S + + L
Sbjct: 501 NNRNKELMLTSGVIPLLEKMISCSQSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLL 560
Query: 554 DTGTRESREL-AIKILCNLSSGDNIVYHILYLDCTSKLVRLLE--DPILSSYCIKIIKAL 610
T+ +L A+ L NLS+ + +L + L L + + + ++ L
Sbjct: 561 LQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLLNL 620
Query: 611 CTS-EARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQ 669
+S E + + + I ++A +L+TG EQE V L+ LC Q+ E +I
Sbjct: 621 ASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIP 680
Query: 670 CVVDISVNGNSRGKETAKELIML 692
+V ISVNG+ RG++ +++L+ML
Sbjct: 681 SLVSISVNGSPRGRDKSQKLLML 703
Score = 67 (28.6 bits), Expect = 5.4e-67, Sum P(2) = 5.4e-67
Identities = 39/168 (23%), Positives = 67/168 (39%)
Query: 530 LSHQQNYASELV-ASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTS 588
L+ N EL+ SG+IP + K + +S+ A + NLS + I S
Sbjct: 497 LAVNNNRNKELMLTSGVIPLLEKMISCS--QSQGPATALYLNLSCLEKAKPVIGSSQAVS 554
Query: 589 KLVRLLEDPILSSYCIKIIKAL---CTSEARAAVAESNPCIDSIAKLLETGTREEQEHIV 645
V LL + + + AL T S+ I S+ L TG E +
Sbjct: 555 FFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSL 614
Query: 646 DVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLL 693
VLL+L ++ T+ +I + + G++ +E A +++L
Sbjct: 615 AVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVIL 662
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 361 (132.1 bits), Expect = 7.1e-73, Sum P(3) = 7.1e-73
Identities = 80/217 (36%), Positives = 130/217 (59%)
Query: 4 DVAESVELPFYCT--VKVHRLMCLELKTLINKISHIHSDIESARPGCTSGIHVLCSFHVA 61
DV E VE F+ K+H MC L + KI I +E+ARP SGI LCS HV
Sbjct: 2 DVNE-VEENFFAPGDAKLHGKMCNALSVIYCKIMSIFPSLEAARPRSKSGIQALCSLHVV 60
Query: 62 VDKSKLLIQYCSESSKLYLAITADRIQMKFERVRNTLELCLSQIQNIVPSLLAAKVSDII 121
++K K ++++C+ESSKLYLAIT D + +KFE+ +++L L ++++IV + +++ +I+
Sbjct: 61 LEKVKNILRHCTESSKLYLAITGDSVVLKFEKAKSSLTDSLRRVEDIVQQSIGSQLLEIL 120
Query: 122 HDIRNAKFPLEPSEDEAGKVLLALLHRGISASSFINXXXXXXXXXXXXRLNITSPLALLI 181
++ N +F L+P+E E G ++ LL +G + S + RL ITS A L
Sbjct: 121 MELENTEFSLDPAEKEIGDQIIGLLQQGGNFESSSDNNELEVFHQAATRLGITSSRAALT 180
Query: 182 EKRSIKRLLQKICDTDTTRKK-VLKCLLYLLRKYGEL 217
E+R +K+L+++ D RK+ ++ LL+L+RKY +L
Sbjct: 181 ERRCLKKLIERARMEDDKRKESIVAYLLHLMRKYSKL 217
Score = 284 (105.0 bits), Expect = 7.1e-73, Sum P(3) = 7.1e-73
Identities = 45/77 (58%), Positives = 63/77 (81%)
Query: 261 PPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAI 320
PPEE +C ISL+LMYDPV+IASG+T+ER+ I+KWF+ GH TCPKTH +L ++ +TPN +
Sbjct: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCV 338
Query: 321 KELISQWCLKHGISIPE 337
K LIS WC ++G+ +P+
Sbjct: 339 KALISSWCEQNGVQVPD 355
Score = 215 (80.7 bits), Expect = 7.1e-73, Sum P(3) = 7.1e-73
Identities = 79/295 (26%), Positives = 146/295 (49%)
Query: 412 QSSMIRHGTDL-TSLSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFL 470
Q +++ T+L T+L+ + + +C VE I+ LLKD+ ++R L N V+ L++FL
Sbjct: 416 QVTLVERCTELLTTLTDVDTLR--KKCRVVEQIRVLLKDDEEARILMGENGCVEALLQFL 473
Query: 471 KDAHNLCDAKAQKDGAEVLLAI-LSQSRDEMPLFHKDEICTFALFLDSEIMEEALEIIEV 529
A N +A AQK GA L + + +R++ + I L + ++ I +
Sbjct: 474 GSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEMLCNPHSHGSVTAIYL 533
Query: 530 LSHQQNYASELVASGI-IPSIIKFLDTGTRESREL-AIKILCNLSSGDNIVYHILYLDCT 587
A ++ S + +P ++ L T T ++ A+ L +LS+ + +L D
Sbjct: 534 NLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPCLLSADLV 593
Query: 588 SKLVRLL--EDPILSSYCIKIIKALCTSEARAAVAESNPC-IDSIAKLLETGTREEQEHI 644
+ L L ++ + + ++ L +EA S P + ++ +L+TG EQE
Sbjct: 594 NALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQEQA 653
Query: 645 VDVLLSLCHEHTKYC-QLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKE 698
V +LL LC+ H++ C ++ E +I +V ISVNG RG+E A++L+ L ++
Sbjct: 654 VSLLLILCN-HSEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLLTLFRELRQ 707
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 240 (89.5 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 39/83 (46%), Positives = 58/83 (69%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P++F+C ISL +M DPV+++SG+T+ER I+KW GH+TCPKT L + ++TPN ++
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLR 316
Query: 322 ELISQWCLKHGISIPEPHSQPMP 344
LI+QWC + I P+P S P
Sbjct: 317 SLIAQWCEANDIEPPKPPSSLRP 339
Score = 136 (52.9 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 60/268 (22%), Positives = 107/268 (39%)
Query: 436 QCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAILSQ 495
Q A I+ L K N +R +A + PL+ L D++ Q+ LL +
Sbjct: 369 QRSAAGEIRLLAKRNADNR-VAIAEAGAIPLLVGLLSTP---DSRIQEHSVTALLNLSIC 424
Query: 496 SRDEMPLFHKDEICTFALFLDS---EIMEEALEIIEVLSHQQNYASELVASGIIPSIIKF 552
++ + I L E E A + LS + A G IP ++
Sbjct: 425 ENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVL 484
Query: 553 LDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPI--LSSYCIKIIKAL 610
L+ GT+ ++ A L NL + L RLL +P + + I+ L
Sbjct: 485 LNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAIL 544
Query: 611 CTSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQC 670
+ A+ S+ + S+ + + TG+ +E+ VL+ LC ++ A ++
Sbjct: 545 SSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGP 604
Query: 671 VVDISVNGNSRGKETAKELIMLLDHCKE 698
++D++ NG RGK A +L+ + E
Sbjct: 605 LIDLAGNGTDRGKRKAAQLLERISRLAE 632
Score = 106 (42.4 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 32/137 (23%), Positives = 66/137 (48%)
Query: 23 MCLELKTLINKISHIHSDI-ESARPGCTSGIHVLCSFHVAVDKSKLLIQYCSESSKLYLA 81
+C L + + + +I ES P + L + A+ +K +++CS+ SK+YL
Sbjct: 32 LCYNLARRLKLLVPMFEEIRESNEPISEDTLKTLMNLKEAMCSAKDYLKFCSQGSKIYLV 91
Query: 82 ITADRIQMKFERVRNTLELCLSQI--QNI-VPSLLAAKVSDIIHDIRNAKFPLEPSEDEA 138
+ +++ K V LE LSQI + + + + +V ++ R AK ++ S+DE
Sbjct: 92 MEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVREQVELVLSQFRRAKGRVDVSDDEL 151
Query: 139 GKVLLALLHRGISASSF 155
+ L +L ++ ++
Sbjct: 152 YEDLQSLCNKSSDVDAY 168
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 270 (100.1 bits), Expect = 1.3e-31, Sum P(3) = 1.3e-31
Identities = 64/163 (39%), Positives = 88/163 (53%)
Query: 180 LIEKRSIKRLLQKICDTDTTRKKVLKCLLYLLRKYGELICKHKTLSTHAVPKEPCHQSIE 239
+IE+ + K LQ I D T + L++ G L + K + K Q +E
Sbjct: 213 IIERLAKKLELQTIDDLKTETIAIQS----LIQDKGGLNIETKQHIIELLNKFKKLQGLE 268
Query: 240 AQAKLGNEWDENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGH 299
A L + +S L P EF C I+L +M DPV+IA+G+T+E+ IQKWF+AGH
Sbjct: 269 ATDILYQPVINKAITKSTSLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGH 328
Query: 300 TTCPKTHMRLDNVSVTPNVAIKELISQWCLKHGISIPEPHSQP 342
TCPKT LD++S+ PN A+K LI QWC K+ IPE P
Sbjct: 329 KTCPKTRQELDHLSLAPNFALKNLIMQWCEKNNFKIPEKEVSP 371
Score = 132 (51.5 bits), Expect = 1.3e-31, Sum P(3) = 1.3e-31
Identities = 61/278 (21%), Positives = 126/278 (45%)
Query: 428 LASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAE 487
L+S Q +V+ ++ L ++N ++R L N+ PL+ L + D+ Q++
Sbjct: 388 LSSSQLEEQRRSVKQMRLLARENPENRVL-IANAGAIPLLVQLL---SYPDSGIQENAVT 443
Query: 488 VLLAILSQSRDEMPLFHKDEICTFALFLDS---EIMEEALEIIEVLSH-QQNYASELVAS 543
LL + ++ + ++ I L++ E E + + LS +N + +++
Sbjct: 444 TLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSN 503
Query: 544 GIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPILSSY- 602
GI P ++ L GT ++ A+ L NLS + L+ LL+D L
Sbjct: 504 GI-PPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMID 562
Query: 603 -CIKIIKALCTS-EARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQ 660
+ I+ L + E R A+ + + I+++ + + GT + +E VLL L ++ +
Sbjct: 563 EALSILLLLASHPEGRQAIGQLS-FIETLVEFIRQGTPKNKECATSVLLELGSNNSSFIL 621
Query: 661 LANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKE 698
A + + +V+I+ +G +R + A LI L+ ++
Sbjct: 622 AALQFGVYEYLVEITTSGTNRAQRKANALIQLISKSEQ 659
Score = 69 (29.3 bits), Expect = 1.3e-31, Sum P(3) = 1.3e-31
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 27 LKTLINKISHIHSDIESARPGCTSGIHVLCSFHVAVDKSKLLIQYCSESSKLYLAITADR 86
LK LI + I ES P C ++ L +A K L++ CS SK+Y+A+ +
Sbjct: 85 LKILIPFLDEIRG-FES--PSCKHFLNRLRKVFLAAKK---LLETCSNGSKIYMALDGET 138
Query: 87 IQMKFERVRNTLELCL 102
+ +F + L L
Sbjct: 139 MMTRFHSIYEKLNRVL 154
Score = 67 (28.6 bits), Expect = 6.7e-25, Sum P(3) = 6.7e-25
Identities = 30/122 (24%), Positives = 50/122 (40%)
Query: 585 DCTSKLVRLLEDPILSSY--CIKIIKALCTS--EARAAVAESNPCIDSIAKLLETGTREE 640
D S LV L L +K ++ L E R +A + I + +LL
Sbjct: 379 DEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAG-AIPLLVQLLSYPDSGI 437
Query: 641 QEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKEDN 700
QE+ V LL+L + +L + E I +++I NGN +E + + L E+
Sbjct: 438 QENAVTTLLNLSIDEVNK-KLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENK 496
Query: 701 AS 702
+
Sbjct: 497 VT 498
Score = 49 (22.3 bits), Expect = 4.8e-23, Sum P(3) = 4.8e-23
Identities = 25/133 (18%), Positives = 55/133 (41%)
Query: 450 NGQSRHLAFLNSYVKPLIKFLKDAH-NLCDAKAQKDGAEVLLAILSQSRDEMPLFHKDEI 508
N ++ A V+PL+ LKD + + D + +LL + S + I
Sbjct: 533 NSANKGRAIDAGIVQPLLNLLKDKNLGMID-----EALSILLLLASHPEGRQAIGQLSFI 587
Query: 509 CTFALFLDS---EIMEEALEII-EVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELA 564
T F+ + E A ++ E+ S+ ++ + G+ +++ +GT ++ A
Sbjct: 588 ETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQRKA 647
Query: 565 IKILCNLSSGDNI 577
++ +S + I
Sbjct: 648 NALIQLISKSEQI 660
Score = 47 (21.6 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 172 NITSPLALLIEKRSIKRLLQKICDTDTTRKKVLKCLLYLLRKYGELICKH 221
+I S + L + +R QK C R K+L L +R + CKH
Sbjct: 56 DIVSIVEFLDQINGYRRTQQKECFNLVRRLKILIPFLDEIRGFESPSCKH 105
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 256 (95.2 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 43/76 (56%), Positives = 58/76 (76%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P+EF+C ISL LM DPV+++SG+T+ER IQKW ++GH TCPKT L + S+TPN +K
Sbjct: 229 PDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLK 288
Query: 322 ELISQWCLKHGISIPE 337
LISQWC +GI +P+
Sbjct: 289 SLISQWCEANGIELPK 304
Score = 142 (55.0 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 64/313 (20%), Positives = 123/313 (39%)
Query: 395 DGLSCASPLKNANSHRY-QSSMIRHGTDLTSLSKLASRPWGSQCDAVENIKKLLKDNGQS 453
+G+ +N+ + +SS H ++ +++L S Q A I+ L K N +
Sbjct: 298 NGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEIRLLAKRNVNN 357
Query: 454 RHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAILSQSRDEMPLFHKDEICTFAL 513
R + + PL+ L + D + Q+ LL + ++ + I
Sbjct: 358 R-ICIAEAGAIPLLVNLLSSS---DPRTQEHAVTALLNLSIHENNKASIVDSHAIPKIVE 413
Query: 514 FLDS---EIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCN 570
L + E E A + LS + A+G IP +I L G+ ++ A + N
Sbjct: 414 VLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFN 473
Query: 571 LSSGDNIVYHILYLDCTSKLVRLLEDPI--LSSYCIKIIKALCTS-EARAAVAESNPCID 627
L + L+ L DP + + ++ L + E + +A S P I
Sbjct: 474 LCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVIARSEP-IP 532
Query: 628 SIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAK 687
+ ++++TG+ +E+ +L LC T+ A + + ++S G R K A
Sbjct: 533 PLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSETGTDRAKRKAS 592
Query: 688 ELIMLLDHCKEDN 700
++ L+ ED+
Sbjct: 593 SILELMHQANEDS 605
Score = 112 (44.5 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
Identities = 60/221 (27%), Positives = 88/221 (39%)
Query: 516 DSEIMEEALEIIEVLS-HQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSG 574
D E A+ + LS H+ N AS +V S IP I++ L TG+ E+RE A L +LS
Sbjct: 378 DPRTQEHAVTALLNLSIHENNKAS-IVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVV 436
Query: 575 DNIVYHILYLDCTSKLVRLLED--PILSSYCIKIIKALCTSEARAAVAESNPCIDSIAKL 632
D I L+ LL D P I LC + A + +
Sbjct: 437 DENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNF 496
Query: 633 LETGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIML 692
L T + + +L L +A +E I +V++ G+ R +E A ++ L
Sbjct: 497 LVDPTGGMIDEALSLLSILAGNPEGKIVIARSEPIPP-LVEVIKTGSPRNRENAAAILWL 555
Query: 693 LDHCKEDNASECSTLRA---DMLHDSSSHHTDN---KTSSV 727
L C D + A D L + S TD K SS+
Sbjct: 556 L--CSADTEQTLAAKAAGVEDALKELSETGTDRAKRKASSI 594
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 240 (89.5 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 41/88 (46%), Positives = 62/88 (70%)
Query: 249 DENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMR 308
DE+ +S L P +F C +SL LM DPV++A+G+T+ER +IQ+W + G+ TCPKT +
Sbjct: 231 DES--KKSDKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQK 288
Query: 309 LDNVSVTPNVAIKELISQWCLKHGISIP 336
L+N ++TPN ++ LIS+WC +H I P
Sbjct: 289 LENFTLTPNYVLRSLISRWCAEHNIEQP 316
Score = 159 (61.0 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 64/278 (23%), Positives = 124/278 (44%)
Query: 425 LSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKD 484
+ +L+SR + +AV I+ L K + +R L + L+ L D Q++
Sbjct: 337 VQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSE----DVATQEN 392
Query: 485 GAEVLLAI-LSQSRDEMPLFHKDEICTFALFLDS---EIMEEALEIIEVLSHQQNYASEL 540
+L + + ++ E+ +F + + L + E E A + LS +
Sbjct: 393 AITCVLNLSIYENNKELIMF-AGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIII 451
Query: 541 VASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPI-- 598
SG IP+++ L+ GT ++ A L NL + + LV++L D
Sbjct: 452 GGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRH 511
Query: 599 -LSSYCIKIIKALCTSE-ARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHT 656
+ + I+ L ++ A++A+ ++N + ++ +L+T +E+ +LLSLC T
Sbjct: 512 RMVDEALTILSVLANNQDAKSAIVKANT-LPALIGILQTDQTRNRENAAAILLSLCKRDT 570
Query: 657 -KYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLL 693
K + +++ ++D+S NG RGK A L+ LL
Sbjct: 571 EKLITIGRLGAVVP-LMDLSKNGTERGKRKAISLLELL 607
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 237 (88.5 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 41/94 (43%), Positives = 63/94 (67%)
Query: 249 DENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMR 308
D N +S + P+EF+C ISL LM DPV++++G+T+ER I+KW +GH TCP T +
Sbjct: 263 DSN--GDSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQK 320
Query: 309 LDNVSVTPNVAIKELISQWCLKHGISIPEPHSQP 342
+ ++TPN ++ LISQWC +G+ P+ +QP
Sbjct: 321 MSTSALTPNYVLRSLISQWCETNGMEPPKRSTQP 354
Score = 145 (56.1 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 64/286 (22%), Positives = 119/286 (41%)
Query: 413 SSMIRHGTDLTSLSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKD 472
SS R D LSKL S Q A ++ L K N +R + + PL+ L
Sbjct: 362 SSSERANIDAL-LSKLCSPDTEEQRSAAAELRLLAKRNANNR-ICIAEAGAIPLLLSLLS 419
Query: 473 AHNLCDAKAQKDGAEVLLAILSQSRDEMPLFHKDEICTFALFLDS---EIMEEALEIIEV 529
+ +L + Q+ LL + ++ + + + L + E E A +
Sbjct: 420 SSDL---RTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFS 476
Query: 530 LSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSK 589
LS Y + G IP+++ L G++ ++ A L NL +
Sbjct: 477 LSVIDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPL 536
Query: 590 LVRLLEDPI--LSSYCIKIIKALCTS-EARAAVAESNPCIDSIAKLLETGTREEQEHIVD 646
++ L+ +P L + I+ L + E +AA+ + P + + +++ +GT +E+
Sbjct: 537 IMGLVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEP-VPVLVEMIGSGTPRNRENAAA 595
Query: 647 VLLSLCHEHTKYCQLANTES--IIQCVVDISVNGNSRGKETAKELI 690
V+L LC LA + I+ + ++++NG RGK A +L+
Sbjct: 596 VMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLL 641
Score = 97 (39.2 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 57/233 (24%), Positives = 97/233 (41%)
Query: 516 DSEIMEEALEIIEVLS-HQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSG 574
D E A+ + LS H+ N AS +++SG +PSI+ L G+ E+RE A L +LS
Sbjct: 422 DLRTQEHAVTALLNLSIHEDNKAS-IISSGAVPSIVHVLKNGSMEARENAAATLFSLSVI 480
Query: 575 DNIVYHILYLDCTSKLVRLLEDPILSSY--CIKIIKALCTSEARAAVAESNPCIDSIAKL 632
D I + LV LL + + LC + A + I L
Sbjct: 481 DEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGL 540
Query: 633 LETGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIML 692
+ T + + +LS+ H + + +V++ +G R +E A +++
Sbjct: 541 VTNPTGALMDEAM-AILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLH 599
Query: 693 L---DH--CKEDNASECSTLRADMLHDSSSHHTDNKTSSVASRFLGRKIARFL 740
L +H A EC + L + + + TD + A + L R ++RFL
Sbjct: 600 LCSGEHHLVHLARAQECGIMVP--LRELALNGTD-RGKRKAVQLLER-MSRFL 648
Score = 64 (27.6 bits), Expect = 5.0e-20, Sum P(3) = 5.0e-20
Identities = 33/192 (17%), Positives = 77/192 (40%)
Query: 516 DSEIMEEALEIIEVLSHQQ-NYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSG 574
D+E A + +L+ + N + +G IP ++ L + ++E A+ L NLS
Sbjct: 380 DTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIH 439
Query: 575 DNIVYHILYLDCTSKLVRLLEDPILSSY---CIKIIKALCTSEARAAVAESNPCIDSIAK 631
++ I+ +V +L++ + + + E + + I ++
Sbjct: 440 EDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMG-AIPALVV 498
Query: 632 LLETGTREEQEHIVDVLLSLC-HEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELI 690
LL G++ ++ L +LC ++ K A ++ ++ + N + A ++
Sbjct: 499 LLGEGSQRGKKDAAAALFNLCIYQGNK--GRAIRAGLVPLIMGLVTNPTGALMDEAMAIL 556
Query: 691 MLLDHCKEDNAS 702
+L E A+
Sbjct: 557 SILSSHPEGKAA 568
Score = 62 (26.9 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 30/141 (21%), Positives = 58/141 (41%)
Query: 20 HRLMCLELKTLINKISHIHSDIESARPGCTSGIH---VLCSFHVAVDKSKLLIQYCSESS 76
+R L L I + ++ R G G L A++ + L++ E S
Sbjct: 49 YRRQLLALSRRIRLLGPFVEELRERRRGEGEGEEEERALAPLADALEAALALLRLGREGS 108
Query: 77 KLYLAITADRIQMKFERVRNTLELCLSQI--QNIVPSLLAAKVSDIIH-DIRNAKFPLEP 133
++ L + D + KF+ V LE L I + S + +++H ++ AK ++
Sbjct: 109 RISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERIDM 168
Query: 134 SEDEAGKVLLALLHRGISASS 154
+DE LL++ + S+
Sbjct: 169 PDDEFYNDLLSVYDKNYDPSA 189
Score = 55 (24.4 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 172 NITSPLALLIEKRSIKRLLQKICDTDTTRKKVLKCLLYLLRK 213
N +P E+ +I LL K+C DT ++ L LL K
Sbjct: 355 NKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAK 396
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 232 (86.7 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 41/91 (45%), Positives = 61/91 (67%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P +F+CS+SL LM DPV++ASG+TFERV+IQKW + G CPKT L + ++TPN ++
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVR 300
Query: 322 ELISQWCLKHGISIPEP----HS-QPMPALL 347
++ WC + + P+P HS +P P L+
Sbjct: 301 AFLASWCETNNVYPPDPLELIHSSEPFPLLV 331
Score = 162 (62.1 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 63/283 (22%), Positives = 118/283 (41%)
Query: 425 LSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKD 484
+ L S +Q +A I+ L +++ +R + + L+ L D + Q D
Sbjct: 427 IDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYST----DERIQAD 482
Query: 485 GAEVLLAILSQSRDEMPLFHKDEICTFALFLDSEIMEEA----LEIIEVLSHQQNYASEL 540
LL + ++ + I L + +EEA + LS + Y +E+
Sbjct: 483 AVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEI 542
Query: 541 VASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPILS 600
+G I ++ L +G+ ++ A L NLS ++ LV L+ DP
Sbjct: 543 GEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM-DPAFG 601
Query: 601 SY--CIKIIKALCT-SEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTK 657
+ ++ L T E + A+ E I + +++E G+ +E+ LL LC K
Sbjct: 602 MVEKAVVVLANLATVREGKIAIGEEGG-IPVLVEVVELGSARGKENATAALLQLCTHSPK 660
Query: 658 YCQLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKEDN 700
+C E +I +V ++ +G +RGKE A+ L+ ++ N
Sbjct: 661 FCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQSN 703
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 229 (85.7 bits), Expect = 7.6e-26, Sum P(3) = 7.6e-26
Identities = 39/76 (51%), Positives = 55/76 (72%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
PE F+C ISL LM DPV++++G+T+ER IQKW +AGH TCPK+ L + +TPN +K
Sbjct: 249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLK 308
Query: 322 ELISQWCLKHGISIPE 337
LI+ WC +GI +P+
Sbjct: 309 SLIALWCESNGIELPQ 324
Score = 130 (50.8 bits), Expect = 7.6e-26, Sum P(3) = 7.6e-26
Identities = 63/278 (22%), Positives = 114/278 (41%)
Query: 422 LTSLSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKA 481
L+ L KLA+ Q A ++ L K N +R + + PL+ L + D +
Sbjct: 348 LSLLEKLANGTTEQQRAAAGELRLLAKRNVDNR-VCIAEAGAIPLLVELLSSP---DPRT 403
Query: 482 QKDGAEVLLAILSQSRDEMPLFHKDEICTFALFLDS---EIMEEALEIIEVLSHQQNYAS 538
Q+ LL + ++ + I L + E E A + LS
Sbjct: 404 QEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKV 463
Query: 539 ELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPI 598
+ A+G I ++I L+ GTR ++ A + NL + L RLL+D
Sbjct: 464 AIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAG 523
Query: 599 --LSSYCIKIIKALCTS-EARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEH 655
+ + I+ L T+ E + A+AE+ I + +++ TG+ +E+ +L LC +
Sbjct: 524 GGMVDEALAILAILSTNQEGKTAIAEAES-IPVLVEIIRTGSPRNRENAAAILWYLCIGN 582
Query: 656 TKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLL 693
+ +A + +++ NG R K A L+ L+
Sbjct: 583 IERLNVAREVGADVALKELTENGTDRAKRKAASLLELI 620
Score = 66 (28.3 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 21/87 (24%), Positives = 38/87 (43%)
Query: 616 RAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDIS 675
R +AE+ I + +LL + QEH V LL+L + + +I +V++
Sbjct: 380 RVCIAEAG-AIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITD-IVEVL 437
Query: 676 VNGNSRGKETAKELIMLLDHCKEDNAS 702
NG+ +E A + L E+ +
Sbjct: 438 KNGSMEARENAAATLFSLSVIDENKVA 464
Score = 59 (25.8 bits), Expect = 7.6e-26, Sum P(3) = 7.6e-26
Identities = 22/82 (26%), Positives = 37/82 (45%)
Query: 57 SFHVAVDKSKLLIQYCSESSKLYLAITADRIQMKFERVRNTLELCLSQI--QNIVPSLLA 114
+ +A+D S L + + SKL+ D + KF + +E LSQI + I S
Sbjct: 71 AMRIALDSSLELFRSVNGGSKLFQLFDRDSLVEKFRDMTVEIEAALSQIPYEKIEVSEEV 130
Query: 115 AKVSDIIH-DIRNAKFPLEPSE 135
+ ++H + AK E S+
Sbjct: 131 REQVQLLHFQFKRAKERWEESD 152
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 240 (89.5 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 40/82 (48%), Positives = 59/82 (71%)
Query: 255 ESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSV 314
+S L PE+F C ISL LM DP ++++G+T+ER +IQ+W + G+ +CPKT +L+N ++
Sbjct: 237 KSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTL 296
Query: 315 TPNVAIKELISQWCLKHGISIP 336
TPN ++ LISQWC KH I P
Sbjct: 297 TPNYVLRSLISQWCTKHNIEQP 318
Score = 123 (48.4 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 59/275 (21%), Positives = 114/275 (41%)
Query: 427 KLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGA 486
KL+S+ + AV I+ L K + +R L + L+K L D + Q++
Sbjct: 349 KLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDG---DTETQENAV 405
Query: 487 EVLLAILSQSRDEMPLFHKDEICTFALFLDS---EIMEEALEIIEVLSHQQNYASELVAS 543
+L + ++ + + + L L + E E A + LS + AS
Sbjct: 406 TCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGAS 465
Query: 544 GIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPI---LS 600
G I +++ L G+ ++ A L NL + LV++L D ++
Sbjct: 466 GAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMA 525
Query: 601 SYCIKIIKALCTSE-ARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHT-KY 658
+ I+ L +++ A+ A+ +N I + L+ +E+ +LL LC T K
Sbjct: 526 DEALTILSVLASNQVAKTAILRAN-AIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKL 584
Query: 659 CQLANTESIIQCVVDISVNGNSRGKETAKELIMLL 693
+ +++ ++++S +G R K A L+ LL
Sbjct: 585 ISIGRLGAVVP-LMELSRDGTERAKRKANSLLELL 618
Score = 88 (36.0 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 42/187 (22%), Positives = 73/187 (39%)
Query: 516 DSEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGD 575
D+E E A+ I LS ++ ++ +G + SI+ L G+ E+RE A L +LS D
Sbjct: 397 DTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLAD 456
Query: 576 NIVYHILYLDCTSKLVRLLEDPILSSY--CIKIIKALCTSEARAAVAESNPCIDSIAKLL 633
I LV LL+ + + LC + A + + K+L
Sbjct: 457 ENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKML 516
Query: 634 ETGTREEQ-EHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIML 692
+ E + + +L L + +I ++D R +E A +++
Sbjct: 517 TDSSSERMADEALTILSVLASNQVAKTAILRANAIPP-LIDCLQKDQPRNRENAAAILLC 575
Query: 693 LDHCKED 699
L CK D
Sbjct: 576 L--CKRD 580
Score = 84 (34.6 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 49/210 (23%), Positives = 86/210 (40%)
Query: 546 IPSIIKFLDTGTRESRELAIKILCNLS--SGDNIVYHILYLDCTSKLVRLLE---DPILS 600
I +++ L + + E R A+ + +LS S DN + I LV+LL D
Sbjct: 343 IRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRIL-IAEAGAIPVLVKLLTSDGDTETQ 401
Query: 601 SYCIKIIKALCTSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLC-HEHTKYC 659
+ I L E + + SI +L G+ E +E+ L SL + K
Sbjct: 402 ENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKI- 460
Query: 660 QLANTESIIQCVVDISVNGNSRGKETAKELI--MLLDHCKEDNASECSTLR--ADMLHDS 715
+ I +VD+ G+ RGK+ A + + + + A ++ ML DS
Sbjct: 461 -IIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDS 519
Query: 716 SSHHTDNKTSSVASRFLGRKIAR--FLRSN 743
SS ++ ++ S ++A+ LR+N
Sbjct: 520 SSERMADEALTILSVLASNQVAKTAILRAN 549
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 202 (76.2 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 37/73 (50%), Positives = 49/73 (67%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P++F C ISL LM DPV+I++G+T++R I +W GH TCPKT L + + PN A+K
Sbjct: 306 PKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALK 365
Query: 322 ELISQWCLKHGIS 334
LI QWC GIS
Sbjct: 366 NLIVQWCTASGIS 378
Score = 110 (43.8 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 47/164 (28%), Positives = 77/164 (46%)
Query: 549 IIKFLDTGTRESRELA---IKILCNLSSGDNIVYHILYLDCTSKLVRLL--EDPILSSYC 603
+IK+L G++ ++ +A I++L +N Y I L RLL E+ I
Sbjct: 411 LIKYLADGSQAAQTVAAREIRLLAKTGK-ENRAY-IAEAGAIPHLCRLLTSENAIAQENS 468
Query: 604 IKIIKALCTSEA-RAAVAESNPCIDSIAKLLETG-TREEQEHIVDVLLSLC--HEHTKYC 659
+ + L E ++ + E C++SI +L +G T E QE+ L SL HE+ K
Sbjct: 469 VTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKK-- 526
Query: 660 QLANTESIIQCVVDISVNGNSRGKETA-KELIMLLDHCKEDNAS 702
++A + ++ + + NG RGK+ A L L H DN S
Sbjct: 527 RIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTH--PDNCS 568
Score = 83 (34.3 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 51/284 (17%), Positives = 106/284 (37%)
Query: 428 LASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAE 487
LA +Q A I+ L K ++R + L + L + A AQ++
Sbjct: 415 LADGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSEN----AIAQENSVT 470
Query: 488 VLLAILSQSRDEMPLFHKDE-----ICTFALFLDSEIMEEALEIIEVLSHQQNYASEL-V 541
+L + +++ + + + + L E E A + LS Y + +
Sbjct: 471 AMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAI 530
Query: 542 ASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPILSS 601
+ ++ L GT ++ A+ L NLS+ + ++ S LV L++ ++
Sbjct: 531 VDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGVAE 590
Query: 602 YCIKIIKALCTSEARA-AVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYC- 659
+ L A A+ + + + + ++ GT +E+ V LL LC
Sbjct: 591 EAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCRSGGAAVA 650
Query: 660 -QLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKEDNAS 702
++ +I + + G R + A L + + +NA+
Sbjct: 651 EKVLRAPAIAGLLQTLLFTGTKRARRKAASLARVFQ--RRENAA 692
Score = 68 (29.0 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 54 VLC--SFHVAVDKSKLLIQYCSESSKLYLAITADRIQMKFERVRNTLELCL 102
+LC ++ + +SK+L+ YC++SSKL+L + I F + + L
Sbjct: 104 LLCLKELYLLLYRSKILVDYCAQSSKLWLLLQNPSISGYFHDLNQEISTLL 154
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 238 (88.8 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 43/86 (50%), Positives = 65/86 (75%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
PEEF+C +S LM DPVV+ASG+T+++++IQKW ++G+ TCPKT L + ++TPN+ I+
Sbjct: 75 PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIR 134
Query: 322 ELISQWCLKHGISIPEPHSQPMPALL 347
E+IS+WC K+G+ E SQ P L+
Sbjct: 135 EMISKWCKKNGL---ETKSQYHPNLV 157
Score = 68 (29.0 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 46/225 (20%), Positives = 89/225 (39%)
Query: 516 DSEIMEEALEIIEVLSHQQNYASELVASG--IIPSIIKFLDTGTRESRELAIKILCNLSS 573
D ++ E+ + + +S + +LV +IP +I L GT +R A + LS+
Sbjct: 228 DEKLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSA 287
Query: 574 GDNIVYHILYLDCTSKLVRLLED--PILSSYCIKIIKALCTSEARAAVAESNPCIDSIAK 631
D+ I L+ LLE+ P+ I LC + + A + + + K
Sbjct: 288 LDSNKVLIGKSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGK 347
Query: 632 LLETGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGN-SRGKETAKELI 690
+ G ++ + +L++ H K + + ++ I+ R KE A ++
Sbjct: 348 KISNGLYVDE---LLAILAMLVTHWKAVEELGELGGVSWLLKITRESECKRNKENA--IV 402
Query: 691 MLLDHCKEDNASECSTLRADMLHDSSSHHTDNKTSSVASRFLGRK 735
+L C D T ++ + ++H T K S + RK
Sbjct: 403 ILHTICFSDR-----TKWKEIKEEENAHGTITKLSREGTSRAQRK 442
Score = 55 (24.4 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 12/58 (20%), Positives = 30/58 (51%)
Query: 634 ETGTREEQEHIVDVLLSLCH-EHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELI 690
E+ + +E+ + +L ++C + TK+ ++ E+ + +S G SR + A ++
Sbjct: 390 ESECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTITKLSREGTSRAQRKANGIL 447
Score = 52 (23.4 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 547 PSIIKFLDTGTRESRELAIKILCNLSSGD 575
P+++ +T TR RE+ +LC +SS +
Sbjct: 154 PNLVNEDETVTRSDREIFNSLLCKVSSSN 182
Score = 37 (18.1 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 715 SSSHHTDNKTSSVASRFLGRKIARF 739
SSS+ D K+++ R L RK F
Sbjct: 179 SSSNLQDQKSAAKELRLLTRKGTEF 203
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 194 (73.4 bits), Expect = 2.0e-19, Sum P(3) = 2.0e-19
Identities = 29/76 (38%), Positives = 52/76 (68%)
Query: 264 EFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKEL 323
+F C +SL +M DPV+++SG+T+E+ +I++W + G CPKT L + ++ PN +K L
Sbjct: 236 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKAL 295
Query: 324 ISQWCLKHGISIPEPH 339
I+ WC + + +P+P+
Sbjct: 296 IANWCETNDVKLPDPN 311
Score = 132 (51.5 bits), Expect = 2.0e-19, Sum P(3) = 2.0e-19
Identities = 65/308 (21%), Positives = 126/308 (40%)
Query: 401 SPLKNANSHRYQSSMIRHGTDLTSL-SKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFL 459
S + +A S+ + + T + L +L S +Q A ++ L K N +R +
Sbjct: 525 SRIVSAPSNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGN 584
Query: 460 NSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAILSQSRDEMPLFHKDEICTFALFLD--- 516
+ + L++ L D+ Q++ LL + ++ + I L+
Sbjct: 585 SGAIVLLVELLYST----DSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGS 640
Query: 517 SEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDN 576
SE E + + LS + ++ SG I ++ L GT ++ A L NLS
Sbjct: 641 SEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQE 700
Query: 577 IVYHILYLDCTSKLVRLLEDPI--LSSYCIKIIKALCT-SEARAAVAESNPCIDSIAKLL 633
I+ L+ L+ DP + + ++ L T E R A+ + I + +++
Sbjct: 701 NKAMIVQSGAVRYLIDLM-DPAAGMVDKAVAVLANLATIPEGRNAIGQEGG-IPLLVEVV 758
Query: 634 ETGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLL 693
E G+ +E+ LL L ++C + E + +V +S +G R +E A+ L+
Sbjct: 759 ELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYF 818
Query: 694 DHCKEDNA 701
+ + NA
Sbjct: 819 RNQRHGNA 826
Score = 48 (22.0 bits), Expect = 7.4e-11, Sum P(3) = 7.4e-11
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 662 ANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKEDNASECSTLRADMLHDSSSHHTD 721
A E+ + ++++S+N N++ I L H E+ +SE A L S S +
Sbjct: 601 ATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLF-SLSVIEE 659
Query: 722 NKTSSVASRFLG 733
NK S +G
Sbjct: 660 NKIKIGQSGAIG 671
Score = 38 (18.4 bits), Expect = 2.0e-19, Sum P(3) = 2.0e-19
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 97 TLELCLSQIQNIVPSLLAAKVSDIIHDIRNAKFP 130
+LE CL +I+++ +++ + + D R+ P
Sbjct: 127 SLEQCLEKIKHLSYEEISSVIDGALRDQRDGVGP 160
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 172 (65.6 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 257 GVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTP 316
G+ PP F+C +S LM DPV++ASG+TF+R I+KW + G CP+T L + + P
Sbjct: 235 GISIPPY-FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIP 293
Query: 317 NVAIKELISQWCLKHGISI 335
N +K +I+ W + I++
Sbjct: 294 NYTVKAMIASWLEANRINL 312
Score = 136 (52.9 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 542 ASGIIPSIIKFLDTGTRESRELAIKILCNLS-SGDNIVYHILYLDCTSKLVRLLEDPILS 600
++ I +++ L GT ++ A L NLS + DN I+ LV LL DP L
Sbjct: 595 SNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKA-RIVQAKAVKYLVELL-DPDLE 652
Query: 601 SY--CIKIIKAL-CTSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTK 657
+ ++ L E R A+ I + + ++ G++ +E+ VLL LC K
Sbjct: 653 MVDKAVALLANLSAVGEGRQAIVREGG-IPLLVETVDLGSQRGKENAASVLLQLCLNSPK 711
Query: 658 YCQLANTESIIQCVVDISVNGNSRGKETAKELI 690
+C L E I +V +S +G R KE A++L+
Sbjct: 712 FCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLL 744
Score = 91 (37.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 62/318 (19%), Positives = 129/318 (40%)
Query: 395 DGLSCASPLKNANSHRY-QSSMIRHGTDLTSLSKLASRPWGSQCDAVE-NIKKLLKDNGQ 452
DG +S N S + ++ R +SL+ +S G+ + ++ N+ L Q
Sbjct: 321 DGGDASSMANNMGSQDFNRTESFRFSLRSSSLTSRSSLETGNGFEKLKINVSASLCGESQ 380
Query: 453 SRHLAFLNSYVKPLIKFLKD-AHNLCDAKAQKDGAEVLL----AILSQSRDEMPLFHKDE 507
S+ L + P + + ++C + D + +IL + + K
Sbjct: 381 SKDLEIFE-LLSPGQSYTHSRSESVCSVVSSVDYVPSVTHETESILGNHQSSSEMSPKKN 439
Query: 508 ICTFALFLDSEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKI 567
+ + + ++ E A + E H + + + S I +++ L +G+ + + A
Sbjct: 440 LES-SNNVNHE--HSAAKTYECSVHDLDDSGTMTTSHTI-KLVEDLKSGSNKVKTAAAAE 495
Query: 568 LCNLS--SGDNIVYHILYLDCTSKLVRLL--EDPILSSYCIKIIKALCTSEARAAVAESN 623
+ +L+ S +N V HI + L+ LL E+ + + + + L SE A+
Sbjct: 496 IRHLTINSIENRV-HIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEV 554
Query: 624 PCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGK 683
I+ + +L TG +E+ L SL ++ + + IQ +V++ G RGK
Sbjct: 555 GAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGK 614
Query: 684 ETAKELIMLLDHCKEDNA 701
+ A + L ++ A
Sbjct: 615 KDAASALFNLSITHDNKA 632
Score = 70 (29.7 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 480 KAQKDGAEVLLAILSQSRDEMPLFHKDEICTFALFL---DSEIMEEALEIIEVLSHQQNY 536
+ +KD A L LS + D + + + + L D E++++A+ ++ LS
Sbjct: 612 RGKKDAASALFN-LSITHDNKARIVQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEG 670
Query: 537 ASELVASGIIPSIIKFLDTGTRESRELAIKILCNL 571
+V G IP +++ +D G++ +E A +L L
Sbjct: 671 RQAIVREGGIPLLVETVDLGSQRGKENAASVLLQL 705
Score = 68 (29.0 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 25/127 (19%), Positives = 50/127 (39%)
Query: 544 GIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLE---DPILS 600
G I ++ L + + ++E A+ L NLS + I+ + LV +L D
Sbjct: 514 GAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKE 573
Query: 601 SYCIKIIKALCTSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQ 660
+ + R + +SN I ++ LL GT ++ L +L H +
Sbjct: 574 NSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKAR 633
Query: 661 LANTESI 667
+ +++
Sbjct: 634 IVQAKAV 640
Score = 50 (22.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 8/43 (18%), Positives = 25/43 (58%)
Query: 526 IIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKIL 568
++++ + + + ++ G IP ++ +GT+ ++E A ++L
Sbjct: 702 LLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLL 744
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 197 (74.4 bits), Expect = 9.5e-18, Sum P(3) = 9.5e-18
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P+EF C ISL LM DPVV ++G+T++R I +W GH+TCP + L + + PN A++
Sbjct: 298 PKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALR 357
Query: 322 ELISQWCLKHGISIPEPHS 340
LISQWC +G+ P S
Sbjct: 358 SLISQWCGVYGLQYDSPES 376
Score = 101 (40.6 bits), Expect = 9.5e-18, Sum P(3) = 9.5e-18
Identities = 42/196 (21%), Positives = 78/196 (39%)
Query: 517 SEIMEEALEIIEVLSHQQNYASELVAS-GIIPSIIKFLDTGTRESRELAIKILCNLSSGD 575
+E E A + LS N+ ++ G + + L GT ++ A+ L NLS+
Sbjct: 498 TEAKENAAATLFSLSVVHNFKKLIMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHP 557
Query: 576 NIVYHILYLDCTSKLVRLLEDPILSSYCIKIIKALCTSEARA-AVAESNPCIDSIAKLLE 634
+L L++ L + +S + L + V S I S+ L+
Sbjct: 558 ESSARMLESCAVVALIQSLRNDTVSEEAAGALALLMKQPSIVHLVGSSETVITSLVGLMR 617
Query: 635 TGTREEQEHIVDVLLSLCHEHTKYC--QLANTESIIQCVVDISVNGNSRGKETAKELIML 692
GT + +E+ V L +C ++A + + I++NG R K+ A ++ +
Sbjct: 618 RGTPKGKENAVSALYEICRRGGSALVQRVAKIPGLNTVIQTITLNGTKRAKKKASLIVKM 677
Query: 693 LDHCKEDNASEC-STL 707
+ +A STL
Sbjct: 678 CQRSQMPSAMALGSTL 693
Score = 47 (21.6 bits), Expect = 9.5e-18, Sum P(3) = 9.5e-18
Identities = 13/73 (17%), Positives = 36/73 (49%)
Query: 41 IESARPGCTSGIHVLC--SFHVAVDKSKLLIQYCSESSKLYLAITADRIQMKFERVRNTL 98
+++A G S LC +V + +++LL+ Y + + + + + + + F L
Sbjct: 85 LDTAAAGAFSDAANLCFRELYVVLFRAELLVSYVASAGRAWALLRSPHLAASFR----DL 140
Query: 99 ELCLSQIQNIVPS 111
+ L+ + +++P+
Sbjct: 141 DAELAVVLDVLPA 153
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 224 (83.9 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 101/382 (26%), Positives = 175/382 (45%)
Query: 376 SFSSSDTDHDLH-PSNGKTDDGLSCASPLKNANSHRYQSSMIRHGTDLTSLSKLASRPWG 434
S SS DT D P G D L L A S SS+ + S+ ++ S
Sbjct: 23 SVSSIDTSLDCDSPRGGDVDHEL-----LHTAVS--VSSSVSVSSSSSASIQRVLSLIRS 75
Query: 435 SQCD----AVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLL 490
CD A + I++L K + + R + V+PL+ L+ ++ + A LL
Sbjct: 76 EDCDSRLFAAKEIRRLTKTSHRCRR--HFSQAVEPLVSMLR----FDSPESHHEAA--LL 127
Query: 491 AILSQS-RDE---MPLFHKDEICTFALFLDSE---IMEEALEIIEVLSHQQNYASELVAS 543
A+L+ + +DE + + + FL S + E A + LS N + A+
Sbjct: 128 ALLNLAVKDEKNKVSIIEAGALEPIINFLQSNSPTLQEYASASLLTLSASANNKPIIGAN 187
Query: 544 GIIPSIIKFLDTGTRESRELAIKILCNLSS-GDNIVYHILYLDCTSKLVRLLEDPILSSY 602
G++P ++K + G+ +++ A+ L NLS+ DN+ IL S ++ LL+ SS
Sbjct: 188 GVVPLLVKVIKHGSPQAKADAVMALSNLSTLPDNLSM-ILATKPLSPILNLLKSSKKSSK 246
Query: 603 ----CIKIIKALCTS--EARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCH-EH 655
C +I+AL S EAR + + ++ ++LE G+ + +EH V VLL+LC +
Sbjct: 247 TSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQAREHAVGVLLTLCQSDR 306
Query: 656 TKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKEDNASECSTLRADMLHDS 715
+KY + E +I +++++V G S+ + A+ L+ LL + E SE + + S
Sbjct: 307 SKYREPILREGVIPGLLELTVQGTSKSRIKAQRLLCLLRN-SESPRSEVQPDTIENIVSS 365
Query: 716 SSHHTD-NKTSSVASRFLGRKI 736
H D + S A + L +
Sbjct: 366 LISHIDGDDQSGKAKKMLAEMV 387
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 164 (62.8 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 35/82 (42%), Positives = 53/82 (64%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVS-VTPNVAI 320
P +F+C ISL +M DPV++ SG TF+RV IQ+W ++G+ TCP T + L + PN A+
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 321 KELISQWCLKHGISIPEPHSQP 342
+ LI + H +S+ E S+P
Sbjct: 66 RSLILNFA--H-VSLKES-SRP 83
Score = 106 (42.4 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 38/182 (20%), Positives = 76/182 (41%)
Query: 520 MEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVY 579
+E ++ + + ++ SG + + + +D+ + +E ++ +L NLS D+
Sbjct: 112 LESLTRLVRLTKRDSSIRRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKV 171
Query: 580 HILYLDCTSKLVRLLE--DPILSSYCIKIIKALCTSEARAAVAESNP-CIDSIAKLLETG 636
++ ++V +L P + ++ +L E A S P I ++ LL G
Sbjct: 172 GLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVG 231
Query: 637 TREEQEHIVDVLLSLCHEHTKYCQLANTESIIQC-VVDISVNGNSRGKETAKELIMLLDH 695
E++ L +LC N + ++ C V I V G E A E++ LL
Sbjct: 232 NDRERKESATALYALCSFPD------NRKRVVDCGSVPILVEAADSGLERAVEVLGLLVK 285
Query: 696 CK 697
C+
Sbjct: 286 CR 287
Score = 89 (36.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 46/191 (24%), Positives = 86/191 (45%)
Query: 519 IMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGD-NI 577
+ E++L ++ LS + + LVA G+I I+ L G+ + + +A +L +L+ + N
Sbjct: 152 LQEKSLSLLLNLSLEDDNKVGLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNK 211
Query: 578 VYHILYLDCTSKLVRLLE--DPILSSYCIKIIKALCT-SEARAAVAESNPCIDSIAKLLE 634
Y D S LV LL + + ALC+ + R V + C S+ L+E
Sbjct: 212 ATIGSYPDAISALVSLLRVGNDRERKESATALYALCSFPDNRKRVVD---C-GSVPILVE 267
Query: 635 TGTREEQEHIVDVL--LSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIML 692
E V+VL L C + +++ ++ +V++ NGN +G + + ++
Sbjct: 268 AAD-SGLERAVEVLGLLVKCRGGRE--EMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNC 324
Query: 693 LDHCKEDNASE 703
L C + E
Sbjct: 325 LCCCSGEIVDE 335
Score = 41 (19.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 24/94 (25%), Positives = 41/94 (43%)
Query: 439 AVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAILSQSRD 498
AVE + L+K G ++ ++ +V+ L+ L++ NL + L + D
Sbjct: 276 AVEVLGLLVKCRGGREEMSKVSGFVEVLVNVLRNG-NLKGIQYSLFILNCLCCCSGEIVD 334
Query: 499 EMPLFHKDEICTFALFLDSEIMEEALEIIEVLSH 532
E+ EIC F F D+E E+ +L H
Sbjct: 335 EVKREGVVEIC-FG-FEDNE-SEKIRRNATILVH 365
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 160 (61.4 bits), Expect = 2.5e-15, Sum P(4) = 2.5e-15
Identities = 28/71 (39%), Positives = 47/71 (66%)
Query: 263 EEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKE 322
++ +C ISL +M DPVV+ SG T++R I KWF +G+ TCPKT L + + N ++K+
Sbjct: 280 DDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQ 339
Query: 323 LISQWCLKHGI 333
+I + ++G+
Sbjct: 340 VIQSYSKQNGV 350
Score = 69 (29.3 bits), Expect = 2.5e-15, Sum P(4) = 2.5e-15
Identities = 26/116 (22%), Positives = 52/116 (44%)
Query: 27 LKTLINKISHIHSDIE-SARPGCTSGIHVLCSFHVAVDKSKLLIQYCS-ESSKLYLAITA 84
++TL+ + I + P S I L HV K K L+ C+ + +KLY+ + +
Sbjct: 62 VQTLVIFFEELRIQIRVGSIPAGRSVILSLSELHVIFQKLKFLLDDCTRDGAKLYMLMNS 121
Query: 85 DRIQMKFERVRNTLELCLSQIQNIVPSL-LAAKVSDIIHDI--RNAKFPLEPSEDE 137
++ F + ++ L V S+ L +V+++I+ + + K P D+
Sbjct: 122 GQVSAHFRDLTRSISTSLDTFP--VRSVDLPGEVNELIYLVMRQTRKSEARPDRDD 175
Score = 68 (29.0 bits), Expect = 2.5e-15, Sum P(4) = 2.5e-15
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 516 DSEIMEEALEIIEVLSHQQN-YASELVASGIIPSIIKFLDTGTRESRELAIKILCNLS 572
D E M +AL I +L+ Y S LV +G++ S++K L + +E A+ + NLS
Sbjct: 387 DEEEMVKALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLS 444
Score = 66 (28.3 bits), Expect = 2.5e-15, Sum P(4) = 2.5e-15
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 641 QEHIVDVLLSLCHEHTKYC--QLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKE 698
++H V +LL+LCH LA SI+ + S NG G + A LI ++ +E
Sbjct: 608 KQHCVALLLNLCHNGGSDVVGSLAKNPSIMGSLYTASSNGELGGGKKASALIKMIHEFQE 667
Score = 56 (24.8 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 50/234 (21%), Positives = 96/234 (41%)
Query: 411 YQSSMIRHGTDLTSLSK-LASRPWGSQCDAVENIKKLLKD-NGQSRHLAFLNSYVKPLIK 468
Y+S ++ G + SL K L S Q +A+ I L KD G++R + ++ +++
Sbjct: 408 YRSCLVEAGV-VESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDGGGLRLIVE 466
Query: 469 FLKDAHNLCDAKAQKDGAEVLLAILSQ-SR------DEMP-LFHKDEICTFALFLDSEIM 520
L D +++ A L+ L SR D +P L + C + DS
Sbjct: 467 VLNDGARR-ESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYG---DSAKR 522
Query: 521 EEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELA--IKILCNLSSGDNIV 578
+ I +L +Q + ++A+GI+P ++ + + A + IL ++ + +
Sbjct: 523 NALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAKMAEYPDGM 582
Query: 579 YHILYLDCTSKLVRLLED----PILSSYCIKIIKALCTSEARAAVAE--SNPCI 626
+L V++L P +C+ ++ LC + V NP I
Sbjct: 583 ISVLRRGGLKLAVKILGSSEVSPATKQHCVALLLNLCHNGGSDVVGSLAKNPSI 636
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 194 (73.4 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P +F+C I+L LM DPVV+A+G+T++R I W +GH TCPKT L + S+ PN A+K
Sbjct: 275 PADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALK 334
Query: 322 ELISQWC 328
LI WC
Sbjct: 335 NLIVLWC 341
Score = 65 (27.9 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 27/109 (24%), Positives = 48/109 (44%)
Query: 589 KLVRLL--EDPILSSYCIKIIKALCTSEA-RAAVAESNPCIDSIAKLLETG-TREEQEHI 644
KLVR L E P L + I L E + + E++ ++ + ++L +G T E + +
Sbjct: 413 KLVRYLATECPSLQINAVTTILNLSILEQNKTRIMETDGALNGVIEVLRSGATWEAKANA 472
Query: 645 VDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLL 693
L SL +L ++ +VD++ G + K A I+ L
Sbjct: 473 AATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRDALVAILNL 521
Score = 60 (26.2 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 55 LC--SFHVAVDKSKLLIQYCSESSKLYLAITADRIQMKFERVRNTLELCLSQIQNIVPSL 112
LC + + + K LI CS SKL+L + D + F L LS + +I+P L
Sbjct: 91 LCFEEMQIVMQRIKSLIDDCSRVSKLWLLLQIDIVAFNFHE----LVTDLSTVLDILP-L 145
Query: 113 LAAKVSDIIHDI 124
+SD D+
Sbjct: 146 HDFDLSDDAQDL 157
Score = 56 (24.8 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 28/149 (18%), Positives = 60/149 (40%)
Query: 433 WGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAI 492
W ++ +A + L + R L V L+ K +++D +L +
Sbjct: 466 WEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQG----PTSSKRDALVAILNL 521
Query: 493 LSQSRDEMPLFHKDEICTFALFLDSEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKF 552
+++ R+ + F + + A E+ EEA+ ++E + + + A +I + +
Sbjct: 522 VAE-RENVGRFVEAGVMGAAGDAFQELPEEAVAVVEAVVRRGGLMAVSAAFSLIRLLGEV 580
Query: 553 LDTG---TRESRELAIKILCNLSSGDNIV 578
+ G TRES + +C G +V
Sbjct: 581 MREGADTTRESAAATLVTMCR-KGGSELV 608
Score = 48 (22.0 bits), Expect = 3.4e-14, Sum P(4) = 3.4e-14
Identities = 17/97 (17%), Positives = 41/97 (42%)
Query: 599 LSSYCIKIIKALCTSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTK- 657
L + +++A+ AV+ + I + +++ G +E L+++C +
Sbjct: 547 LPEEAVAVVEAVVRRGGLMAVSAAFSLIRLLGEVMREGADTTRESAAATLVTMCRKGGSE 606
Query: 658 -YCQLANTESIIQCVVDISVNGNSRGKETAKELIMLL 693
++A I + + ++ G +RG A L+ L
Sbjct: 607 LVAEMAAIPGIERVIWEMIGAGTARGGRKAASLMRYL 643
Score = 46 (21.3 bits), Expect = 3.4e-14, Sum P(4) = 3.4e-14
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 527 IEVLSHQQNYASELVA-SGIIPSIIKFLDTGTRESRELAIKILCNLS 572
+ L+ A +A +G IP ++++L T + A+ + NLS
Sbjct: 391 LRALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLS 437
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 155 (59.6 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 265 FKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKELI 324
FKC ISL +M PV +++G T++RV IQ+W + G+ TCP T L N PN+ + LI
Sbjct: 15 FKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLHRLI 74
Query: 325 SQW 327
W
Sbjct: 75 DHW 77
Score = 112 (44.5 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 31/117 (26%), Positives = 61/117 (52%)
Query: 544 GIIPSIIKFLDTGTRESR-ELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPILS-- 600
G++ IIK + + + S E + +L ++S + ++ +KL LL DP S
Sbjct: 231 GLVTEIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVS 290
Query: 601 --SYCIKIIKALCT-SEARAAVAESNPCIDSIA-KLLETGTREEQEHIVDVLLSLCH 653
C+K+++A+ + E R+ + + C++++ KL++ T EH V VL S+C+
Sbjct: 291 VTEKCLKLLEAISSCKEGRSEICDG-VCVETVVNKLMKVSTAAT-EHAVTVLWSVCY 345
Score = 67 (28.6 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 46/229 (20%), Positives = 94/229 (41%)
Query: 410 RYQSSMIRHGTD-LTSLSKLASR--P-WGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKP 465
R + ++ +G D LTS L R P C AV ++ + D +A V
Sbjct: 178 RLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAV--LEFIAVDAESKLIIAKGEGLVTE 235
Query: 466 LIKFLKDAHNLCDAKAQKDGAEVLLAILSQSRDEMPLFHKDEICTF-ALFLDS----EIM 520
+IK + D+ + +L+AI S R ++ L + + +L D +
Sbjct: 236 IIKLISSDS---DSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVT 292
Query: 521 EEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKIL---CNLSSGDNI 577
E+ L+++E +S + SE+ + +++ L + + E A+ +L C L
Sbjct: 293 EKCLKLLEAISSCKEGRSEICDGVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKKA 352
Query: 578 VYHILYLDCTSKLVRLLEDPILSSYCIKIIKALCTSEARAAVAESNPCI 626
++ ++ +K++ LL+ S C ++ + T + S C+
Sbjct: 353 QDAVIRINGVTKILLLLQ-----SNCSLTVRHMLTDLLKVFKVNSRSCL 396
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 180 (68.4 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 259 LEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGH-TTCPKTHMRLDNVSVTPN 317
++ P F+C ISL LM DPV + +G+T++R I+ W + G+ TTCP T L + ++ PN
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPN 71
Query: 318 VAIKELISQWCL---KHGIS-IPEPHSQP 342
++ LI +WC+ +G+ IP P QP
Sbjct: 72 HTLRRLIQEWCVANRSNGVERIPTP-KQP 99
Score = 84 (34.6 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 60/281 (21%), Positives = 116/281 (41%)
Query: 435 SQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAILS 494
S+ A+ ++ +D+ ++R L ++ + LIK L + ++ V+L I
Sbjct: 124 SRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITE 183
Query: 495 QSRDEMPLFHKD----EICTFALFLDS-EIMEEALEIIEVLSHQQNYA--------SELV 541
+ + D E T LF S E A +IE++S A SE V
Sbjct: 184 PN--QFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESV 241
Query: 542 ASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPILSS 601
G++ + + + R + ++ IK L L S V ++ T+ +L D + +
Sbjct: 242 FEGVLDLLRNPISS--RRALKIGIKTLFALCS----VKSTRHIAITAGAPEILIDRLAAD 295
Query: 602 Y--C-----IKIIKALC-TSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCH 653
+ C + ++ LC T E AA E + + K + + E+ LL+LC
Sbjct: 296 FDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCT 355
Query: 654 EHTKYCQ-LANTESIIQCVVDISVNGNSRGKETAKELIMLL 693
++ + A ++Q ++ + R K+ A++L+ LL
Sbjct: 356 AEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLL 396
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 177 (67.4 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 34/75 (45%), Positives = 45/75 (60%)
Query: 253 VNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNV 312
+ E + + P F C ISL M DPV + +G+T+ER+ I KWFN GH TCP T L +
Sbjct: 56 IKELDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDD 115
Query: 313 SVTPNVAIKELISQW 327
+VTPN + LI W
Sbjct: 116 TVTPNKTLHHLIYTW 130
Score = 88 (36.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 42/192 (21%), Positives = 87/192 (45%)
Query: 526 IIEVLSHQQNYASELVAS-GIIPSIIKFL-DTGTRESRELAIKILCNLSSGDNIVYHILY 583
+I L ++ + +ELV+S ++ +++ + D R A+++L +S + ++
Sbjct: 254 LIRGLVEEKGFRAELVSSHSLLVGLMRLVKDKRHRNGVSPALRLLKPISVHKQVRSLMVS 313
Query: 584 LDCTSKLVRLLE--DPILSSYCIKIIKALCTS-EARAAVAESNPCIDSIAKLLETGTREE 640
+ +LV +L DP + ++ ALCT E R AV +S I ++L +
Sbjct: 314 IGAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENC 373
Query: 641 QEHIVDVLLSLCHEHTKYCQ-LANTESIIQCVVDISVNG-NSRGKETAKELIMLLDHCKE 698
+ + +L S+C + C LA + ++ + +G ++ K+ + EL+ L
Sbjct: 374 TNYALSILWSVCKLAPEECSPLAVEVGLAAKLLLVIQSGCDAALKQRSAELLKLCSLHYS 433
Query: 699 DNA--SECSTLR 708
D S+C R
Sbjct: 434 DTMFISKCKLTR 445
Score = 66 (28.3 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 34/142 (23%), Positives = 63/142 (44%)
Query: 523 ALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHIL 582
AL +++ +S + S +V+ G +P ++ L + E ELA+ +L L + ++ +
Sbjct: 294 ALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCT--DVEGRVA 351
Query: 583 YLDCTSKL---VRLLEDPILSSYCIKIIKALCTSEARAAVAESNPCIDSI---AKLL--- 633
D + + VR+L +S C ++ S + A E +P + AKLL
Sbjct: 352 VKDSANTIPYTVRVLMR--VSENCTNYALSILWSVCKLAPEECSPLAVEVGLAAKLLLVI 409
Query: 634 ETGTREEQEHIVDVLLSLCHEH 655
++G + LL LC H
Sbjct: 410 QSGCDAALKQRSAELLKLCSLH 431
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 182 (69.1 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 250 ENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRL 309
+NP ++ +E P+EF C++S ++M +P++IASG+TFE+ +I +W TCP+T L
Sbjct: 54 KNPESDISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCPRTKQVL 112
Query: 310 DNVSVTPNVAIKELISQWCLKHGISIPE 337
+ + PN I E+I +WCL H P+
Sbjct: 113 YHRFMIPNHLINEVIKEWCLIHNFDRPK 140
Score = 77 (32.2 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 45/236 (19%), Positives = 101/236 (42%)
Query: 518 EIMEEALEIIEVLSHQQNYASELVASG--IIPSIIKFLDTGTRESRELAIKILCNLSSGD 575
E +E + + + S + + LVA ++P + K++ GT +R + + +LS D
Sbjct: 214 EFLENIVTALHIFSTSEKNKT-LVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTD 272
Query: 576 NIVYHILYLDCTSKLVRLLE--DPILSSYCIKIIKALCTSEARAAVAESNPCIDSIAKLL 633
+ I + L+ ++E D + +S + LC + + A S I + K +
Sbjct: 273 SNKIIIGNSEVLKALIHVIEEGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKI 332
Query: 634 ETGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLL 693
+ G+ ++ +L + ++ + + + +I + I N NS + ++++
Sbjct: 333 KAGSNVSM--LLSLLAFVSTQNHQTTEEMDNLGLIYDLFSILRNSNSLVNDE-NAVVIVY 389
Query: 694 DHCKEDNASECSTLRAD----MLHDSSSHHT----DNKTSSVASRFLGRKIARFLR 741
+ CK A + LR + +L + + H T +N+ + A+ R + LR
Sbjct: 390 NICKSYKALQNVVLREEKRDVVLEEENKHGTFTRLENQEAGRATSLAKRILEWILR 445
Score = 69 (29.3 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 36/154 (23%), Positives = 67/154 (43%)
Query: 557 TRESRELAIKILCNLSSGDNIVYHILYL-DCTSKLVRLL---ED--PILSSYCIKIIKAL 610
T ++ELA+K SS VY + + D ++L+ L ED P + +
Sbjct: 170 TEAAKELALKAK-RFSSV--CVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIF 226
Query: 611 CTSEARAAVAESNPCI-DSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQ 669
TSE + NP + +AK ++ GT + H + SL + + + N+E +++
Sbjct: 227 STSEKNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIGNSE-VLK 285
Query: 670 CVVDISVNGNSRGKETAKELIMLLDHCKEDNASE 703
++ + G+S T++ L + C SE
Sbjct: 286 ALIHVIEEGDSLA--TSEAFSALSNLCPVKEISE 317
Score = 49 (22.3 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 34/151 (22%), Positives = 62/151 (41%)
Query: 516 DSEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGD 575
DS EA + L + + + V+ G+I + IK + G+ S + + +L +S+ +
Sbjct: 295 DSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVS--MLLSLLAFVSTQN 352
Query: 576 NIVYHILYLDCTSKLVRLLEDPILSSYCIKIIKALCTSEARAAVAESNPCIDSIAKLLET 635
+ T ++ L I + I ++ A V N C S L
Sbjct: 353 H--------QTTEEMDNL--GLIYDLFSILRNSNSLVNDENAVVIVYNIC-KSYKALQNV 401
Query: 636 GTREEQEHIVDVLLSLCHEHTKYCQLANTES 666
REE+ DV+L ++H + +L N E+
Sbjct: 402 VLREEKR---DVVLEEENKHGTFTRLENQEA 429
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 173 (66.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 35/75 (46%), Positives = 45/75 (60%)
Query: 253 VNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNV 312
++E + E P F C ISL M DPV + +G+T+ER I KWFN GH TCP T L +
Sbjct: 52 ISELELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDD 111
Query: 313 SVTPNVAIKELISQW 327
VTPN + +LI W
Sbjct: 112 LVTPNKTLHQLIYTW 126
Score = 83 (34.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 42/194 (21%), Positives = 90/194 (46%)
Query: 526 IIEVLSHQQNYASELVAS-GIIPSIIKFL-DTGTRESRELAIKILCNLSSGDNIVYHILY 583
+I L ++ + +ELV+S ++ +++ + D R A+ +L ++S + ++
Sbjct: 250 LIGRLVEEKGFRAELVSSHSLLVGLMRLVKDRRRRNGVSPALTLLKSVSVHKQVRNLLVR 309
Query: 584 LDCTSKLVRLLEDPILSSYCIK----IIKALCT-SEARAAVAESNPCIDSIAKLLETGTR 638
+ +LV +L P L C++ ++ +LC SE R A+ +S I +LL +
Sbjct: 310 IGAVPQLVDVL--PCLDVECLESALFVLDSLCLESEGRIALKDSVNTIPHTVRLLMKVSE 367
Query: 639 EEQEHIVDVLLSLCHEHTKYCQ-LANTESIIQCVVDISVNGNSRG-KETAKELIMLLDHC 696
+ + + +L S+C ++ C LA + ++ + +G K+ + EL+ L
Sbjct: 368 KCTNYAISILWSVCKLASEECSSLAVEVGLAAKLLLVIQSGCDPALKQRSAELLKLCSLH 427
Query: 697 KEDNA--SECSTLR 708
D+ S+C R
Sbjct: 428 YSDSMFISKCKLTR 441
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 177 (67.4 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 45/147 (30%), Positives = 77/147 (52%)
Query: 195 DTDTTRKKVLKCLLYLLRKYGELICKHKTLSTHAVPKEPCHQSIEAQAKLGNEWDENPVN 254
+ DT R+++ K L +L G + +T + V K +++ L + P +
Sbjct: 8 NADTLRRELQKVLTEILNDGGGND-RDETEAFSGVVKA-IDEAVRILTCLRKVESKIPES 65
Query: 255 ESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSV 314
+ +E P+EF C++S +M +PV+IASG+T+E+ +I +W TCPKT L +
Sbjct: 66 DISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHRLW 124
Query: 315 TPNVAIKELISQWCLKHGISIPEPHSQ 341
PN I +LI+QWCL + +P +
Sbjct: 125 IPNHLISDLITQWCLVNKYDHQKPSDE 151
Score = 77 (32.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 42/154 (27%), Positives = 66/154 (42%)
Query: 501 PLFHKDEICTFALFLDSEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRES 560
PL DE +L L I+ AL + +L + +E +IP + K L GT E+
Sbjct: 212 PLSTLDEAVDSSLELQENIVT-ALFNLSILESNKTVIAENCL--VIPLLTKSLKQGTDET 268
Query: 561 RELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLE--DPILSSYCIKIIKALC-TSEARA 617
R A L +LS+ D+ I + L+ L+E D + + + LC E +
Sbjct: 269 RRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLIEEGDLLATKEATSTVFNLCIVLENKG 328
Query: 618 AVAESNPCIDSIAKLLETGTREEQEHIVDVLLSL 651
V + I + K ++ G+ VD LLSL
Sbjct: 329 KVVSAG-LIHAATKKIKAGSN------VDELLSL 355
Score = 54 (24.1 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 616 RAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDIS 675
+ +AE+ I + K L+ GT E + + L SL + + N+E++ + ++D+
Sbjct: 244 KTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAV-KALIDLI 302
Query: 676 VNGNSRGKETAKELIMLL 693
G+ + A + L
Sbjct: 303 EEGDLLATKEATSTVFNL 320
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 187 (70.9 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 36/88 (40%), Positives = 55/88 (62%)
Query: 259 LEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNV 318
++ P F+C ISL LM DPV I++G+T++R I W G+TTCP T + L + ++ PN
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNH 71
Query: 319 AIKELISQWCL---KHGIS-IPEPHSQP 342
++ LI +WC+ +G+ IP P QP
Sbjct: 72 TLRRLIQEWCVANRSNGVERIPTP-KQP 98
Score = 60 (26.2 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 24/97 (24%), Positives = 42/97 (43%)
Query: 561 RELA-IKILCNLSSGDNIV-YHILYLDCTSKLVRLLEDPILSSYCIKIIKALCTSEARAA 618
R LA +++LC L G H L + K + + D + Y + ALCT+E R
Sbjct: 305 RGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRA-TEYAAGALLALCTAEERCR 363
Query: 619 -VAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHE 654
A + + + L+++ E + +LL L +
Sbjct: 364 DEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRD 400
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 197 (74.4 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 42/101 (41%), Positives = 60/101 (59%)
Query: 248 WDENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHM 307
W E+ ES + PPE F+C IS+ LM DPV+I++G T++RV I+ W N+G+ TCP T+
Sbjct: 20 WPESEP-ESEITIPPE-FQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNT 77
Query: 308 RLDNVSVTPNVAIKELISQWCLKHGIS----IPEPHSQPMP 344
L PN I+++I WC++ G IP P MP
Sbjct: 78 VLTTFDQIPNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMP 118
Score = 49 (22.3 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 22/91 (24%), Positives = 40/91 (43%)
Query: 615 ARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLAN--TESIIQCVV 672
++ A A S C+ + K + R+ I+ +LSL + N E++++ +
Sbjct: 206 SKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVAEALVKLIR 265
Query: 673 DISVNGNSRGKETAKELIMLLDHCKEDNASE 703
D SV+ +S M+L K + ASE
Sbjct: 266 D-SVSSSSTKSSLIAIYQMVLQ--KPEIASE 293
Score = 46 (21.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 26/146 (17%), Positives = 53/146 (36%)
Query: 517 SEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKIL---CNLSS 573
S + I +++ + ASE + G++ ++ + E A+ +L C
Sbjct: 271 SSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEKALAVLDAICETEH 330
Query: 574 G-DNIVYHILYLDCTSKLVRLLEDPILSSYCIKIIKALCTSEARAAV-AESNPCIDSIAK 631
G + + + L + K + + + S I+K T A A +
Sbjct: 331 GREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGNTVAVEDAVRLGAFQKVLL 390
Query: 632 LLETGTREEQEHIVDVLLSLCHEHTK 657
+L+ G EE + LL + + K
Sbjct: 391 VLQVGYGEETKEKATELLKMMNTQMK 416
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 141 (54.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNV----SVT 315
+PP EF C IS +M DPVV++SG+TFERV +Q + PK + +++ ++
Sbjct: 32 QPPVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNFI--PKLNDDEESLPDFSNII 89
Query: 316 PNVAIKELISQWCLKHGISIPEP 338
PN+ +K I WC G+S P+P
Sbjct: 90 PNLNMKSTIDTWCDTVGVSRPQP 112
Score = 111 (44.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 63/324 (19%), Positives = 134/324 (41%)
Query: 398 SCASPLKNANSHRYQSSMIRHGT--DLTSLSKLASRPWGSQCDAVENIKKLLKDNGQSRH 455
S +S ++ H + S+ T D +KL S Q + ++K+ + N ++R
Sbjct: 201 SSSSEIETLTHHTFFSNSTSTATEEDEVIYNKLKSSEIFDQEQGLIMMRKMTRTNDEAR- 259
Query: 456 LAFLNSYVKPLIK-FLKDAHNLCDAKAQKDGAEVLLAILSQSRDEMPLFHKDEICTFALF 514
++ + + L+K + ++L Q + L+ + ++++ + +
Sbjct: 260 VSLCSPRILSLLKNMIVSRYSL----VQTNALASLVNLSLDKKNKLTIVRLGFVPILIDV 315
Query: 515 LDS---EIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRE-SRELAIKILCN 570
L S E E A I LS + + + G + ++ L + +R + L +
Sbjct: 316 LKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRTRHDSALALYH 375
Query: 571 LSSGDNIVYHILYLDCTSKLVRLLEDPILSSYCIKIIKAL-CTSEARAAVAESNPCIDSI 629
L+ ++ L L ++ +S + +I L C SE R+A+ ++N +
Sbjct: 376 LTLNQTNRSKLVRLGAVPALFSMVRSGESASRALLVICNLACCSEGRSAMLDANAVAILV 435
Query: 630 AKLLETGTREE---------QEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNS 680
KL E T E +E+ V L +L HE ++ LA ++ + ++ G
Sbjct: 436 GKLREEWTEEPTEARSSSSARENCVAALFALSHESLRFKGLAKEARAVEVLKEVEERGTE 495
Query: 681 RGKETAKELIMLL-DHCKEDNASE 703
R +E AK+++ L+ + ED+ +
Sbjct: 496 RAREKAKKILQLMRERVPEDDEED 519
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 149 (57.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVA 319
E P EF C I+ LM DPVV++SG+TFER+ +Q N G+ R D +V PN+A
Sbjct: 30 ETPPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVIPNLA 89
Query: 320 IKELISQWCLKHGISIPEP 338
+K I WC + + P P
Sbjct: 90 MKSTIFSWCDRQKVDHPRP 108
Score = 102 (41.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 578 VYHILYLDCT-SKLVRLLEDPILSSYC------IKIIKALCTSEA----RAAVAESNPCI 626
+YH+ + ++LVR P L S +I+ LC A + A+ + N
Sbjct: 383 LYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRILLVLCNLAACPDGKGAMLDGNAVA 442
Query: 627 DSIAKLLETGTREEQ---EHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGK 683
+ KL E G + + E+ V VLL+LC + ++ LA+ + ++++ NGN R K
Sbjct: 443 ILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFRGLASEAGAEEVLMEVEENGNERVK 502
Query: 684 ETAKELIMLL 693
E A ++++ +
Sbjct: 503 EKASKILLAM 512
Score = 78 (32.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 52/235 (22%), Positives = 101/235 (42%)
Query: 426 SKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDG 485
S L SR Q +A ++ L + Q++ + +V LI LK +A+ G
Sbjct: 283 SLLVSRYNLVQTNAAASVVNLSLEK-QNKVKIVRSGFVPLLIDVLKSGTT--EAQEHVAG 339
Query: 486 AEVLLAILSQSRDEMPLFHKDEICTFAL-FLDSE-IMEEALEIIEVLSHQQNYASELVAS 543
A LA+ +++ + + E AL +SE ++A + LS + + LV +
Sbjct: 340 ALFSLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRA 399
Query: 544 GIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLED------P 597
G +P+++ + +G SR L + LCNL++ + +L + + LV L +
Sbjct: 400 GAVPTLLSMVRSGDSTSRILLV--LCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSE 457
Query: 598 ILSSYCIKIIKALCTSEAR-AAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSL 651
C+ ++ LC R +A + + ++ E G +E +LL++
Sbjct: 458 AARENCVAVLLTLCQGNLRFRGLASEAGAEEVLMEVEENGNERVKEKASKILLAM 512
Score = 63 (27.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 17/76 (22%), Positives = 34/76 (44%)
Query: 586 CTSKLVRLLEDPILSSYCI-------KIIKALCTSEARAAVAESNPCIDSIAKLLETGTR 638
CT +++ L ++S Y + ++ + + + S + + +L++GT
Sbjct: 273 CTDRILSFLRSLLVSRYNLVQTNAAASVVNLSLEKQNKVKIVRSG-FVPLLIDVLKSGTT 331
Query: 639 EEQEHIVDVLLSLCHE 654
E QEH+ L SL E
Sbjct: 332 EAQEHVAGALFSLALE 347
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 164 (62.8 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 259 LEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGH-TTCPKTHMRLDNVSVTPN 317
+E P F C ISL +M DPV++++G T++R I+KW AG +CP T + + +TPN
Sbjct: 10 IEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPN 69
Query: 318 VAIKELISQWCL---KHGIS-IPEP 338
++ LI WC +G+ IP P
Sbjct: 70 HTLRRLIQSWCTLNASYGVERIPTP 94
Score = 75 (31.5 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 47/230 (20%), Positives = 94/230 (40%)
Query: 488 VLLAILSQSRDEMPLFHKDEICTFALFLDSEIMEEAL--EIIEVLSHQQNYASELVASGI 545
VL +L+ +D + +I ++ +S + L I+EV Q S + +
Sbjct: 177 VLKNLLNNKKDNNIVKSLTKIMQRGMY-ESRVYATLLLKNILEVADPMQ---SMTLKPEV 232
Query: 546 IPSIIKFLDTG-TRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPILSS--- 601
+++ LD ++++ + A+ IL N+ + + S ++ LL D +S
Sbjct: 233 FTEVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERR 292
Query: 602 ---YCIKIIKALCT-SEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSL---CHE 654
+ ++ LC +E RA I + K + ++ + V VLLS+ C
Sbjct: 293 GPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCAT 352
Query: 655 HTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKEDNASEC 704
++ + + + + V+ + KE AKEL+ L H + S C
Sbjct: 353 PALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKL--HARVWKDSPC 400
Score = 64 (27.6 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 33/189 (17%), Positives = 84/189 (44%)
Query: 528 EVLSHQQNYASELVASGIIPSIIKFLDTGTRESREL---AIKILCNLSSGDNIVYHILYL 584
+++S L A+G+ P + + + E+ L A+ +L +L + + ++ ++L
Sbjct: 126 QIVSENATNKRCLEAAGV-PEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNLLNN 184
Query: 585 ----DCTSKLVRLLEDPILSS--YCIKIIKALC-TSEARAAVAESNPCIDSIAKLLETG- 636
+ L ++++ + S Y ++K + ++ ++ + ++L+
Sbjct: 185 KKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRI 244
Query: 637 TREEQEHIVDVLLSLC----HEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIML 692
+++ + + +L+++C + H K + II+ ++D S RG E A ++ L
Sbjct: 245 SQKATKAAMHILVNICPWGRNRH-KAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDL 303
Query: 693 LDHCKEDNA 701
L C E A
Sbjct: 304 LCQCAEGRA 312
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 192 (72.6 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 37/85 (43%), Positives = 54/85 (63%)
Query: 254 NESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVS 313
++S +E P+EFKC++S +M DPV+I SG+T+E+ +I +W N TCP L V
Sbjct: 67 SDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNHD-LTCPTAKQVLYRVC 125
Query: 314 VTPNVAIKELISQWCLKHGISIPEP 338
+TPN I ELI++WCL + P P
Sbjct: 126 LTPNHLINELITRWCLANKYDRPAP 150
Score = 46 (21.3 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 17/73 (23%), Positives = 32/73 (43%)
Query: 545 IIPSIIKFLDTG---TRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPILSS 601
+IP + K + G TR + L + L ++ S I+ + + L L+ L+D +
Sbjct: 259 VIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIIIGNSVALKALIDLIGELDDLSATH 318
Query: 602 YCIKIIKALCTSE 614
+ + LC E
Sbjct: 319 DALCAVIDLCCDE 331
Score = 40 (19.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 522 EALEIIEVLSHQQNYASELVASGIIPSIIKFL-DTGTRESRELAIKILCNL 571
E+L + ++S + E+ G+I ++ L T + E A+ I+ N+
Sbjct: 359 ESLAALALISPHERVIQEVANLGVIYDLLSILRKTSCMVTCENAVVIVGNM 409
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 152 (58.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 32/85 (37%), Positives = 45/85 (52%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P FKC ISL +M PV + +G T++R IQ+W + G+ TCP T L PN+ ++
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQ 72
Query: 322 ELISQWCLKHGISIPEPHSQPMPAL 346
LI+ W SI H+ P L
Sbjct: 73 RLINIW----SDSIGRRHNGDSPVL 93
Score = 83 (34.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 39/197 (19%), Positives = 94/197 (47%)
Query: 515 LDSEIMEEALEIIEVLSHQQNYASELVAS--GIIPSIIKFLD-TGTRESR--ELAIKILC 569
L+S+I E++ +++ +S + ++A G++ ++K + T + + E ++ L
Sbjct: 203 LESKI--ESVRVLDWISFDAK-SKLMIAERDGVLTEMMKSISITESSDPSLIEASLSFLI 259
Query: 570 NLSSGDNIVYHILYLDCTSKLVRLLEDPILSSYCI-----KIIKALCTS-EARAAVA--E 621
+S + ++ +K+ +L L++ + K+++ L + E R + +
Sbjct: 260 TISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEKSLKLLETLSSKREGRLEICGDD 319
Query: 622 SNPCIDSIAK-LLETGTREEQEHIVDVLLSLCH----EHTKYCQLANTESIIQCVVDISV 676
+ C++ + K LL+ T EH V +L LC+ + T + + + + +V I
Sbjct: 320 NGRCVEGVVKKLLKVSTTAT-EHAVTILWCLCYVFREDKTVEETVERSNGVTKLLVVIQS 378
Query: 677 NGNSRGKETAKELIMLL 693
N ++ ++ AK+LI +L
Sbjct: 379 NCSAMVRQMAKDLIKVL 395
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 186 (70.5 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 38/81 (46%), Positives = 51/81 (62%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P +F+C IS LM DPV+IASG T++R I+KWF +G+ TCP T+ L ++ PN I+
Sbjct: 34 PSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTIR 93
Query: 322 ELISQWC---LKHGIS-IPEP 338
+I WC L GI IP P
Sbjct: 94 RMIQGWCGSSLGGGIERIPTP 114
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 177 (67.4 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 73/289 (25%), Positives = 132/289 (45%)
Query: 55 LCSFHVAVDKSKLLIQYCS-ESSKLYLAITADRIQMKFERVRNTLELCLSQIQNIVPSL- 112
L HV K K L++ C+ + ++L + + +D++ + ++ LS V S+
Sbjct: 92 LKEIHVGFQKLKFLLEDCTRDGARLCMMMNSDQVSDHLRVLTRSISTSLSAFP--VASVD 149
Query: 113 LAAKVSDIIH-DIRNA-KFPLEPSEDEAGKV-----LLAL-LHRGISASSFINXXXXXXX 164
L +V+++I +R A K+ ++P ++ V +LAL ++R + IN
Sbjct: 150 LTTEVNELIDLVVRQARKYGVQPETNDKRAVSSINRILALFVNRVVPDPDEINRILDHVG 209
Query: 165 XXXXXRLNITSPLALLIEKRSIKRLLQKICDTDTTRKKVLKCLLYLLRKYGELICKHKTL 224
+ + L E+ +RL +K KK + LL IC + +
Sbjct: 210 IRKWG--DCVKEINFLGEEIDAERLDEK--------KKKSSDQVELLSSLMGFICYCRCI 259
Query: 225 STHAVPKEPCHQSIEAQAKLGNEWDENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGK 284
+ ++ H E G + D + + V E+ C ISL +M DPVVI +G
Sbjct: 260 ILGRIERDDHHNHHED----GIKKDHDLIRGLKV----EDLLCPISLEIMTDPVVIETGH 311
Query: 285 TFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKELISQWCLKHGI 333
T++R I KWF +G+ TCP T L + + NV+++++I + C +GI
Sbjct: 312 TYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRKHCKTNGI 360
Score = 61 (26.5 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 42/176 (23%), Positives = 79/176 (44%)
Query: 479 AKAQKDGAEVLLAILSQ-SRDEMPLFHKDEICTFALFLD-SEIMEEALEIIEVLSH---Q 533
+K +G ++L+ IL++ ++ E L+ + + D S ++ E + I L +
Sbjct: 465 SKIAGEGLKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKG 524
Query: 534 QNYASELVASGIIPSIIKFLDTGTRESRELA---IKILCNL-SSGDNIVYHILYLDCTSK 589
+Y S ++ +++ L R LA + IL +L SG+ + L DC +
Sbjct: 525 DDYGDSAKRSALL-AVMGLLMQSDNHWRVLAAGAVPILLDLLRSGE--ISGGLTADCLAT 581
Query: 590 LVRLLEDP-----ILSSYCIKI-IKALCTSEARAAVAESNPCIDSIAKLLETGTRE 639
L +L E P ++ +K+ +K L +SE + VA C+ I L G R+
Sbjct: 582 LAKLAEYPDGTIGVIRRGGLKLAVKILSSSED-SPVAVKQHCVGLILNLCLNGGRD 636
Score = 44 (20.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 719 HTDNKTSSVASRFLGRKIARFLRS 742
H D S+A++ G+ IA+FL S
Sbjct: 372 HDDVVPESLAAKGAGKLIAKFLTS 395
Score = 43 (20.2 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 518 EIMEEALEIIEVLSHQQNY-ASELVASGIIPSIIKFLDTGTRESRELAIKILCNLS 572
E++ A+ I V + ++ S LV +G + ++K L + +E A+ + NLS
Sbjct: 403 EMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLS 458
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 161 (61.7 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 259 LEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKW-FNAGHTTCPKTHMRLDNVSVTPN 317
+E P F C ISL +M DPV++++G T++R I+KW F+ +CP T + +TPN
Sbjct: 5 IEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPN 64
Query: 318 VAIKELISQWCL---KHGIS-IPEP 338
++ LI WC +GI IP P
Sbjct: 65 HTLRRLIQSWCTLNASYGIERIPTP 89
Score = 68 (29.0 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 31/127 (24%), Positives = 55/127 (43%)
Query: 588 SKLVRLLEDPILSS------YCIKIIKALCT-SEARAAVAESNPCIDSIAKLLETGTREE 640
S ++ LL D SS + ++ LC +E RA I ++K + ++
Sbjct: 300 SMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQIT 359
Query: 641 QEHIVDVLLSL---CHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCK 697
E V VLLS+ C + ++ + + + + V+ ++ KE AKEL+ L H +
Sbjct: 360 SERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKL--HAR 417
Query: 698 EDNASEC 704
S C
Sbjct: 418 VWRESPC 424
Score = 66 (28.3 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 53/236 (22%), Positives = 98/236 (41%)
Query: 443 IKKLLKDNGQSRHLAFLNSYVKPLIKFLKD--AHNLCDAKAQKDGAEVLLAILSQSRD-- 498
I+KL+K++ S HL + +K L + + + + C A+ E L I+S S D
Sbjct: 98 IEKLIKESSSS-HLNQVKC-LKRLRQIVSENTTNKRCLEAAEVP--EFLANIVSNSVDTY 153
Query: 499 -----EMPLFHKDEICTFALF---LDSE--IMEEALEIIEVLSHQQNYASELV----ASG 544
+ + +++C + DS +M+EAL ++ L + L+ +
Sbjct: 154 NSPSSSLSSSNLNDMCQSNMLENRFDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTN 213
Query: 545 IIPSIIKFLDTGTRESRELAIKILCNLSS-GDNIVYHILYLDCTSKLVRLLEDPI---LS 600
++ ++ K + G ESR A +L L D + +L + +++++L D I +
Sbjct: 214 LVKTLTKIMQRGIYESRAYAALLLKKLLEVADPMQIILLERELFGEVIQILHDQISHKAT 273
Query: 601 SYCIKIIKALCTSEARAAVAESNPCIDSIAKLLETGT----REEQEHIVDVLLSLC 652
++I+ C A I I +LL T R E + VL LC
Sbjct: 274 RSAMQILVITCPWGRNRHKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLC 329
Score = 55 (24.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 33/162 (20%), Positives = 64/162 (39%)
Query: 548 SIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPILSS--YCIK 605
S++ LDT E A+K L N G N+V L ++++ I S Y
Sbjct: 190 SVLYHLDTS-----ETALKSLLNNKKGTNLV---------KTLTKIMQRGIYESRAYAAL 235
Query: 606 IIKALC-TSEARAAVAESNPCIDSIAKLLETG-TREEQEHIVDVLLSLC----HEHTKYC 659
++K L ++ + + ++L + + + +L+ C + H K
Sbjct: 236 LLKKLLEVADPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRH-KAV 294
Query: 660 QLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKEDNA 701
+ II+ ++D + + R E A ++ +L C E A
Sbjct: 295 EGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRA 336
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 152 (58.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 49/167 (29%), Positives = 73/167 (43%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTH--MRLDNVSVTPN 317
E P EF C I+ LM DPVV+ASG+TFER+ +Q N PK H + D +V PN
Sbjct: 9 ETPTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFA--PKLHDGTQPDLSTVIPN 66
Query: 318 VAIKELISQWCLKHGISIPEPHSQPMPALLXXXXXXXXXXXXXXXXXMDDLCLHVSNVSF 377
+A+K I WC ++ + P P + ++ V+ S
Sbjct: 67 LAMKSTILSWCDRNKMEHPRPPDYAYVEGVVRTRMDSLPPGSGHRIAKSEILPPVAENSN 126
Query: 378 SSSDTDHDLHPSNGKTDDGLSCASPLKNANSHRYQSSMIRHGTDLTS 424
S+SD D + ++ LS + L +Q+ I H T + S
Sbjct: 127 SNSDYDSVMGAIRSRSRTSLSSTTSLP-----LHQTRPINHSTRIQS 168
Score = 79 (32.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 37/134 (27%), Positives = 66/134 (49%)
Query: 578 VYHI-LYLDCTSKLVRLLEDPILSSY------CIKIIKALCT----SEARAAVAESNPCI 626
+YH+ L + S+LV+ P++ S +I+ LC SE + A+ + N
Sbjct: 332 LYHLSLIPNNRSRLVKAGAVPMMLSMIRSGESASRILLLLCNLAACSEGKGAMLDGNAVS 391
Query: 627 DSIAKLLETGTREE----QEHIVDVLLSLCHEHTKYCQLAN---TESIIQCVVDISVNGN 679
+ KL E+G E +E+ V LL+L + ++ LA+ E I+ +V+ S +G+
Sbjct: 392 ILVGKLRESGGAESDAAARENCVGALLTLSVGNMRFRGLASEAGAEEILTEIVE-SESGS 450
Query: 680 SRGKETAKELIMLL 693
R KE A +++ L
Sbjct: 451 GRLKEKASKILQTL 464
Score = 67 (28.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 586 CTSKLVRLLEDPILSSYCI-------KIIKALCTSEARAAVAESNPCIDSIAKLLETGTR 638
CT +++ LL I+S Y I I+ + + S + + +L++G+
Sbjct: 222 CTDRILSLLRSLIVSRYNIVQTNAAASIVNLSLEKPNKLKIVRSG-FVPLLIDVLKSGST 280
Query: 639 EEQEHIVDVLLSLCHE 654
E QEH++ L SL E
Sbjct: 281 EAQEHVIGALFSLAVE 296
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 146 (56.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P F+C ISL +M PV + +G T++R IQ+W + G+ TCP T L N PN ++
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQ 70
Query: 322 ELISQW 327
LI W
Sbjct: 71 RLIEIW 76
Score = 78 (32.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 43/182 (23%), Positives = 78/182 (42%)
Query: 524 LEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESR-ELAIKILCNLSSGDNIVYHIL 582
LE I V + + +E G+I ++K + + S E ++ L +SS + ++L
Sbjct: 220 LEFIAVDAESKLLIAE--RDGLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLL 277
Query: 583 YLDCTSKLVRLLEDPILS------SYCIKIIKALC-TSEARAAVAESN-PCIDSIAKLLE 634
+ +LL D S C+K+++ L T E R+ + + C+ ++ K L
Sbjct: 278 REKLIGDVTKLLSDSTSSLSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLM 337
Query: 635 TGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLLD 694
+ EH V VL S+ + L + ++ V SVNG K L++L
Sbjct: 338 KVSTAATEHAVTVLWSVSY-------LFKEDKALEAVT--SVNG------VTKILLLLQS 382
Query: 695 HC 696
+C
Sbjct: 383 NC 384
Score = 63 (27.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 33/175 (18%), Positives = 74/175 (42%)
Query: 466 LIKFLKDAHNLCDAKAQKDGAEVLLAILSQSRDEMPLFHKDEICTFALFL-DS------E 518
+ + +K D + L+AI S R ++ L + I L DS
Sbjct: 240 ITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLSVS 299
Query: 519 IMEEALEIIEVLSHQQNYASELVASG--IIPSIIKFLDTGTRESRELAIKILCNLS---S 573
+ E+ L+++E+L+ + SE+ + +++K L + + E A+ +L ++S
Sbjct: 300 VTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVSYLFK 359
Query: 574 GDNIVYHILYLDCTSKLVRLLEDPILSSYCIKIIKALCTSEARAAVAESNPCIDS 628
D + + ++ +K++ LL+ S C ++ + T + S C+ +
Sbjct: 360 EDKALEAVTSVNGVTKILLLLQ-----SNCSPAVRRMLTDLLKVFKVNSRSCLSA 409
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 80/338 (23%), Positives = 149/338 (44%)
Query: 367 DLCLHVSNVSFSSSDTDHDLHPSNGKTDDG---LSCASPLKNANSHRYQSSMIRHGTDLT 423
DL L+ + +FS ++D ++ LSCAS NS + ++ H
Sbjct: 20 DLSLNDDSSAFSDCNSDRSGEFPTASSESRRLLLSCASE----NSDDLINHLVSHLDSSY 75
Query: 424 SLSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQK 483
S+ + Q A I+ L K+ ++R +KPLI + + D + Q+
Sbjct: 76 SIDE--------QKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSS----DLQLQE 123
Query: 484 DGAEVLL--AILSQSRDEMPLFHKDEICTFALFLDSEIMEE--ALEIIEVLSHQQNYASE 539
G +L ++ ++++ + + AL + + +E A ++ + ++N +
Sbjct: 124 YGVTAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVA- 182
Query: 540 LVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPIL 599
+ SG IP ++ L+TG +++ A L +L S + LV L+ D
Sbjct: 183 IGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMAD-FG 241
Query: 600 SSYCIK--IIKALCTS--EARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEH 655
S+ K + +L S E++ A+ E + + +++E GT+ ++E V +LL LC E
Sbjct: 242 SNMVDKSAFVMSLLMSVPESKPAIVEEGG-VPVLVEIVEVGTQRQKEMAVSILLQLCEES 300
Query: 656 TKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLL 693
Y + E I +V +S G SR K+ A+ LI LL
Sbjct: 301 VVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELL 338
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 168 (64.2 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 242 AKLGNEWDENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTT 301
+KL + +E + S EPP+ F C I+ +M DP V A G T+E I +WF GH T
Sbjct: 334 SKLKGKREEEEASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHET 393
Query: 302 CPKTHMRLDNVSVTPNVAIKELISQW 327
P + RL + S+ PN+A++ I +W
Sbjct: 394 SPMINKRLPHTSLVPNLALRSAIQEW 419
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 156 (60.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 38/102 (37%), Positives = 58/102 (56%)
Query: 230 PKEPCHQSIEAQAKLGNEWDENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERV 289
PK+ ++IE ++K NE DE+P E+FKC IS+ +M DP V A G T+E
Sbjct: 212 PKKGRKETIE-KSK-SNESDEDP--------RLEDFKCPISMEIMRDPHVAADGFTYEAE 261
Query: 290 WIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKELISQWCLKH 331
+KW +G T PKT+ L+N ++ PN ++ +I W K+
Sbjct: 262 EFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRIIIKDWLEKN 303
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 139 (54.0 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 245 GNEWDENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWF-----NAGH 299
G++ D + E G+ E F C ++ ++M++PV + +G+TFER I+KWF N
Sbjct: 9 GSQSDNSSQFEPGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQP 68
Query: 300 TTCPKTHMRLDNVSVTPNVAIKELISQW 327
+CP T L ++P++A++ I +W
Sbjct: 69 LSCPITSKELSITDLSPSIALRNTIEEW 96
Score = 73 (30.8 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 518 EIMEEALEIIEVLSHQQNYASELVASG-IIPSIIKFLDTGTRESRELAIKILCNLSSGD 575
E+ +AL+ ++V+ + +VA G + +I+KFL + RE A+ +L LS +
Sbjct: 161 EVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSKGREAAVSVLFELSKSE 219
Score = 64 (27.6 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 33/124 (26%), Positives = 54/124 (43%)
Query: 586 CTSKLVRLLEDPILSSYCIKIIKALCT--------SEARAAVAESNPCIDSIAKLLETGT 637
C +LVRL+ D + SS KAL T E++A VAE + + +I K L
Sbjct: 143 CNPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDT-VRTIVKFLSQEP 201
Query: 638 REEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDI--SVNGNSRGKETAKELIMLLDH 695
+ +E V VL L ++ + I +V + S + N E A + + L+
Sbjct: 202 SKGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLER 261
Query: 696 CKED 699
+E+
Sbjct: 262 SEEN 265
Score = 49 (22.3 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 516 DSEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLD-TGTRES----RELAIKILCN 570
D E AL + +S + A L+ +GI+P +IK L G + +E++ IL N
Sbjct: 326 DMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLFYVGPNQLPIRLKEVSATILAN 385
Query: 571 L 571
+
Sbjct: 386 I 386
Score = 46 (21.3 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 535 NYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSS 573
N +VA + S+I + T RE A+ L N+SS
Sbjct: 304 NDVKVIVAQTVGSSLIDLMRTRDMSQREAALGALNNISS 342
Score = 42 (19.8 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 19/63 (30%), Positives = 28/63 (44%)
Query: 438 DAVENIKKLL-KDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAILSQS 496
D V I K L ++ + R A V L + K + LC+ GA +LL L+ S
Sbjct: 188 DTVRTIVKFLSQEPSKGREAA-----VSVLFELSK-SEALCEKIGSIHGAIILLVGLTSS 241
Query: 497 RDE 499
+ E
Sbjct: 242 KSE 244
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 145 (56.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 30/88 (34%), Positives = 52/88 (59%)
Query: 245 GNEWDENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWF----NAGHT 300
G++ D++ E GV E F C ++ +M+DPV + +G+TFER I+KWF ++G
Sbjct: 7 GDQSDDSSHFERGVDHIYEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRP 66
Query: 301 -TCPKTHMRLDNVSVTPNVAIKELISQW 327
+CP T L + V+ ++A++ I +W
Sbjct: 67 PSCPLTSQELTSTDVSASIALRNTIEEW 94
Score = 67 (28.6 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 522 EALEIIEVLSHQQNYASELVASG-IIPSIIKFLDTGTRESRELAIKILCNLSSGD 575
+AL+ ++V+ + + +VA G + +++KFL + RE A+ +L LS +
Sbjct: 163 KALQTLQVVVEGDDESKAIVAEGDTVRTLVKFLSHEPSKGREAAVSLLFELSKSE 217
Score = 54 (24.1 bits), Expect = 4.6e-06, Sum P(4) = 4.6e-06
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 521 EEALEIIEVLSHQQNYASELVASGIIPSIIKFL 553
E AL+ + +S + A L++ GI+P +IK L
Sbjct: 329 EAALKALNKISSFEGSAKVLISKGILPPLIKDL 361
Score = 51 (23.0 bits), Expect = 8.9e-06, Sum P(4) = 8.9e-06
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 535 NYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSS 573
N LVA + S++ + +G RE A+K L +SS
Sbjct: 302 NDVKVLVAQTVGSSLVDLMRSGDMPQREAALKALNKISS 340
Score = 38 (18.4 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 660 QLANTESIIQCVVDISVNGNSRGKETAKELIMLLD 694
++A +S+ +VD N + R ++ A+ + +D
Sbjct: 754 EVAEEQSLSAALVDAFQNADFRTRQIAENALKHID 788
Score = 37 (18.1 bits), Expect = 4.6e-06, Sum P(4) = 4.6e-06
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 470 LKDAHNLCDAKAQKDGAEVLLAILSQSRDE 499
L + LC+ GA +LL L+ S E
Sbjct: 213 LSKSEALCEKIGSIHGALILLVGLTSSNSE 242
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 67/269 (24%), Positives = 128/269 (47%)
Query: 438 DAVENIKKLLKDN---GQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAILS 494
+A + I+KLL+ + +R + PL+ L ++ DA+ A + LA+ +
Sbjct: 64 EAAKEIRKLLRKSPVKSSARSKLADAGVIPPLVPMLFSSN--VDARHASLLALLNLAVRN 121
Query: 495 QSRDEMPLFHKDEICTFALFL---DSEIMEEALEIIEVLSHQQNYASELVASGIIPSIIK 551
+ R+++ + + L ++ + E A I LS + +++SG+ P +I+
Sbjct: 122 E-RNKIEIVKAGAVPPLIQILKLHNASLRELATAAILTLSAAPANKAMIISSGVPPLLIQ 180
Query: 552 FLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLED-PILSSYCIK---II 607
L +GT + + A+ L NLS+ IL L+ LL++ S + K ++
Sbjct: 181 MLSSGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLKECKKHSKFAEKATALV 240
Query: 608 KALCT-SE-ARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCH-EHTKYCQLANT 664
+ + + SE R A+ I ++ + +E G+ EH V LLSLC + KY +L
Sbjct: 241 EMILSHSEDGRNAITSCEDGILTLVETVEDGSPLSIEHAVGALLSLCRSDRDKYRKLILK 300
Query: 665 ESIIQCVVDISVNGNSRGKETAKELIMLL 693
E I ++ +V+G S+ ++ A+ L+ LL
Sbjct: 301 EGAIPGLLSSTVDGTSKSRDRARVLLDLL 329
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 129 (50.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 29/79 (36%), Positives = 41/79 (51%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVA 319
E P EF C IS LM DP++++SG ++ER + G T P D +V PN+A
Sbjct: 57 EIPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPP----DFSTVIPNLA 112
Query: 320 IKELISQWCLKHGISIPEP 338
+K I WC + P+P
Sbjct: 113 LKSAIHSWCERRCFPPPKP 131
Score = 71 (30.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 39/191 (20%), Positives = 82/191 (42%)
Query: 518 EIMEEALEIIEVLS-HQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDN 576
E E + +I L+ +N + V G+ P ++ + GT +R + L +LS +
Sbjct: 326 EAQEHSAGVIFSLALEDENKTAIGVLGGLEP-LLHLIRVGTELTRHDSALALYHLSLVQS 384
Query: 577 IVYHILYLDCTSKLVRLLEDPILSSYCIKIIKALCTSEA----RAAVAESN--PCIDSIA 630
++ L L+ ++ L +++ LC + R A+ +S C+ +
Sbjct: 385 NRGKLVKLGAVQMLLGMVS---LGQMIGRVLLILCNMASCPVSRPALLDSGGVECMVGVL 441
Query: 631 KLLETGTREEQEHIVDVLLSLCHEH-TKYCQLANTESIIQCVVDISVNGNSRGKETAKEL 689
+ +E V VL L H+ ++ LA + ++ +V + +G R K+ A+ +
Sbjct: 442 RRDREVNESTRESCVAVLYGLSHDGGLRFKGLAMAANAVEELVKVERSGRERAKQKARRV 501
Query: 690 IMLLDHCKEDN 700
+ +L ED+
Sbjct: 502 LEVLRAKIEDD 512
Score = 61 (26.5 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 530 LSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGD 575
LS +++ ++V SGI+P +I L G+ E++E + ++ +L+ D
Sbjct: 297 LSLEKSNKVKIVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALED 342
Score = 56 (24.8 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 17/75 (22%), Positives = 34/75 (45%)
Query: 586 CTSKLVRLLEDPILSSYCI------KIIKALCTSEARAAVAESNPCIDSIAKLLETGTRE 639
CT++++ L+ I+S Y ++ L ++ + + + +L+ G+ E
Sbjct: 267 CTTRVISALKSLIVSRYATVQVNVTAVLVNLSLEKSNKVKIVRSGIVPPLIDVLKCGSVE 326
Query: 640 EQEHIVDVLLSLCHE 654
QEH V+ SL E
Sbjct: 327 AQEHSAGVIFSLALE 341
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 150 (57.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVA 319
E P+ F C ISL +M DP + A G T+E I W GH T P T+ +L + + PN+A
Sbjct: 324 EAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLA 383
Query: 320 IKELISQW 327
++ I +W
Sbjct: 384 LRSAIQEW 391
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 152 (58.6 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 252 PVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDN 311
P+ S +EPP+ F C IS +M +P V A G T+E ++W N G P T++RL+N
Sbjct: 285 PLQWSVSIEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLEN 344
Query: 312 VSVTPNVAIKELISQWCLKH 331
++ PN+ ++ I W +H
Sbjct: 345 RNLIPNLVLRSAIKDWLQQH 364
Score = 39 (18.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 39 SDIESARPGCTSGIHVLCSF-HVAVDKSKLLIQYCSESSKLYLAITADRIQMK 90
++I+ G T+ H H+ K+ +IQ+ ++L + IQ +
Sbjct: 66 NNIKKLIMGATADSHYSEGMVHITPTKADYVIQHAPHCCNIWLVCNGNLIQTR 118
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 147 (56.8 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 76/333 (22%), Positives = 141/333 (42%)
Query: 376 SFSSSDTDHDLHPSNGKTDDGLSCASPLKNANSHR---YQSSMIRHGTDLTS--LSKL-A 429
SFS + D + D +SC P + S + + S + + D+ ++ L +
Sbjct: 13 SFSDISLNFDSSAFSDCNSD-ISCEFPTTTSESRQRKLFLSCAVDNSDDVIRNLITHLES 71
Query: 430 SRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVL 489
S Q A I+ L K+ ++R +KPL+ + + D + Q+ G +
Sbjct: 72 SSSIEEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSLISSS----DLQLQEYGVTAV 127
Query: 490 LAI-LSQSRDEMPLFHKDEICTF--ALFLDSEIMEE--ALEIIEVLSHQQNYASELVASG 544
L + L EM + + AL L + +E A ++ + ++N + + SG
Sbjct: 128 LNLSLCDENKEM-IVSSGAVKPLVNALRLGTPTTKENAACALLRLSQVEENKIT-IGRSG 185
Query: 545 IIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLL---EDPILSS 601
IP ++ L+ G +++ A L +L S + + LV L+ E ++
Sbjct: 186 AIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESDMVDK 245
Query: 602 YCIKIIKALCTSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQL 661
+ + E++ AV E + + +++E GT+ ++E V +LL LC E Y +
Sbjct: 246 SAFVMNLLMSAPESKPAVVEEGG-VPVLVEIVEAGTQRQKEISVSILLQLCEESVVYRTM 304
Query: 662 ANTESIIQCVVDISVNGNSRG-KETAKELIMLL 693
E + +V +S SRG K A+ LI LL
Sbjct: 305 VAREGAVPPLVALSQGSASRGAKVKAEALIELL 337
>TAIR|locus:2145653 [details] [associations]
symbol:AT5G14510 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR016024
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AL163817 IPI:IPI00537670
PIR:T48624 RefSeq:NP_196955.1 UniGene:At.31922
ProteinModelPortal:Q9LY78 SMR:Q9LY78 PRIDE:Q9LY78
EnsemblPlants:AT5G14510.1 GeneID:831302 KEGG:ath:AT5G14510
TAIR:At5g14510 eggNOG:NOG303012 HOGENOM:HOG000237435
InParanoid:Q9LY78 OMA:CKEHAVG PhylomeDB:Q9LY78
ProtClustDB:CLSN2687225 Genevestigator:Q9LY78 Uniprot:Q9LY78
Length = 327
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 60/273 (21%), Positives = 128/273 (46%)
Query: 435 SQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAILS 494
SQ +A + L + Q + LA + PL+ L+ C A + LA S
Sbjct: 16 SQIEAAIELTNLSRK--QRQKLAE-REIISPLLSMLQSQD--CITTEVALSALLSLAFGS 70
Query: 495 QSRDEMPLFHKDEICTFALFLDSE----IMEEALEIIEVLSHQQNYASELVASGIIPSII 550
+ R+++ + + T L SE ++E A+ + +LS ++ ++ ++ ++
Sbjct: 71 E-RNKVRIVKSGAVPTLLEILQSETKMVVLELAMAFLLILSSCNKNKVKMASTRLVQLLV 129
Query: 551 KF--LDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLL----EDPILSSYCI 604
LD T +++ I L NLS+ IV ++ L++++ + L+ +
Sbjct: 130 GLIGLDRLTIQAKVDGIATLQNLSTLHQIVPLVIASGAPYALLQVINFCDKSSELADKAV 189
Query: 605 KIIKALCTSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQ-LAN 663
+++ + S + +V+ I + + +E G+ + +EH V +LL +C+ + + +
Sbjct: 190 ALLENII-SHSPESVSSIGGAIGVLVEAIEEGSAQCKEHAVGILLGICNNDRETNRGMIL 248
Query: 664 TESIIQCVVDISVNGNSRGKETAKELIMLLDHC 696
E ++ ++ +SV+G R KE A+EL++LL C
Sbjct: 249 REGVMPGLLQVSVDGTRRAKEMARELLLLLRDC 281
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 142 (55.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 255 ESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSV 314
+S +PP F C IS +M +P V A G T+E +++W + GH T P T+++L + ++
Sbjct: 491 DSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNL 550
Query: 315 TPNVAIKELISQW 327
PN A++ I +W
Sbjct: 551 VPNHALRSAIQEW 563
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 138 (53.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P+EF C I+ LM DPV+ + G ++ER ++ W + T P T++ L ++ +TPN +K
Sbjct: 403 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLK 462
Query: 322 ELISQWCLKH 331
I++W H
Sbjct: 463 MAINRWLETH 472
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 138 (53.6 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P+EF C I+ LM DPV+ + G ++ER ++ W + T P T++ L ++ +TPN +K
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLK 464
Query: 322 ELISQWCLKH 331
I++W H
Sbjct: 465 MAINRWLETH 474
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P+EF C I+ +M DPV+ A G ++ER I+ W + + T P T++ L +TPN +K
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRTLK 477
Query: 322 ELISQW 327
I +W
Sbjct: 478 MAIFRW 483
>TAIR|locus:2197654 [details] [associations]
symbol:AT1G61350 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AC004255 EMBL:AY075667 IPI:IPI00545857
PIR:B96639 RefSeq:NP_564774.1 UniGene:At.26275
ProteinModelPortal:O64785 SMR:O64785 PRIDE:O64785
EnsemblPlants:AT1G61350.1 GeneID:842429 KEGG:ath:AT1G61350
TAIR:At1g61350 eggNOG:NOG268378 HOGENOM:HOG000238801
InParanoid:O64785 OMA:GFMPELV PhylomeDB:O64785
ProtClustDB:CLSN2688970 Genevestigator:O64785 Uniprot:O64785
Length = 573
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 45/187 (24%), Positives = 90/187 (48%)
Query: 514 FLDSEI--MEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNL 571
FLDSEI EE+ + + +S +Y L+ SG+I +++ L+ G RE + + L L
Sbjct: 198 FLDSEIGIQEESAKAVFFISGFGSYRDVLIRSGVIGPLVRVLENGNGVGREASARCLMKL 257
Query: 572 SSGDNIVYHILYLDCTSKLVRLLE--D---PILSSYCIKIIKALCTSEARAAVAESNPCI 626
+ + + S L+++ D ++ + C + + E + + E + +
Sbjct: 258 TENSENAWSVSAHGGVSALLKICSCSDFGGELIGTSCGVLRNLVGVEEIKRFMIEEDHTV 317
Query: 627 DSIAKLLETGTREE--QEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKE 684
+ KL+ G++EE Q + +D+LLS+C + + + E IQ +V + + NS
Sbjct: 318 ATFIKLI--GSKEEIVQVNSIDLLLSMCCKDEQTRDILVREGGIQELVSVLSDPNSLSSS 375
Query: 685 TAKELIM 691
+KE+ +
Sbjct: 376 KSKEIAL 382
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVA 319
E P+EF C I+ LM DP++ + G ++E+ ++ W + T P T++ L +V +TPN
Sbjct: 402 EIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRT 461
Query: 320 IKELISQW 327
+K I +W
Sbjct: 462 LKMAIDRW 469
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVA 319
E P+EF C I+ LM DP++ + G ++E+ ++ W + T P T++ L +V +TPN
Sbjct: 403 EIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRT 462
Query: 320 IKELISQW 327
+K I +W
Sbjct: 463 LKMAIDRW 470
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 136 (52.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 254 NESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVS 313
N++ PP + C I +M DP++ A G T+E I++W GH T P T++++++ +
Sbjct: 728 NQNVPRRPPSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCN 787
Query: 314 VTPNVAIKELISQW 327
+ PN A+ I W
Sbjct: 788 LIPNHALHLAIQDW 801
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 136 (52.9 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P+EF C I+ LM DPV+ A G ++E+ ++ W + + P T++ L ++ +TPN +K
Sbjct: 405 PDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPSLVLTPNRTLK 464
Query: 322 ELISQW 327
IS+W
Sbjct: 465 MAISRW 470
Score = 41 (19.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 215 GELICKHK-TLSTHAVPKEPCHQSIEAQAKLGNEWDE 250
GEL ++K TLS H+ P C S + Q + D+
Sbjct: 227 GEL--RYKCTLSGHSAPVLTCAFSYDGQMLVSGSVDK 261
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 137 (53.3 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P+EF C I+ LM DPV+ + G ++E+ ++ W + T P T++ L ++ +TPN +K
Sbjct: 405 PDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLILPSMVLTPNRTLK 464
Query: 322 ELISQWCLKH 331
IS+W H
Sbjct: 465 MAISRWLETH 474
Score = 37 (18.1 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 220 KHK-TLSTHAVPKEPCHQSIEAQAKLGNEWDENPV 253
K+K TLS H P C S Q + D++ +
Sbjct: 230 KYKSTLSGHCAPVLACAFSHNGQMLVSGSVDKSVI 264
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 123 (48.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 256 SGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVT 315
SG P F C IS+ +M DP V + G T+E I+ WF+ G + P T++ L N+++
Sbjct: 430 SGDSSVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLV 489
Query: 316 PNVAIKELI 324
PN ++ I
Sbjct: 490 PNRVLRSFI 498
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 185 SIKRLLQKICDTDTTRKKVLKCLLYLLRKYGELIC-KHKTLSTHAVPKEPCHQSIEAQAK 243
S+ LQ +CD T ++V K +++L + E++ KH+ T+ V KE +++ A +
Sbjct: 71 SVASFLQHVCDRKTY-EEVRK--VHILEE--EIVTLKHQA-DTYLVQKE---KAVTAYDQ 121
Query: 244 LGNEWDE--NPVNE 255
L +E D VNE
Sbjct: 122 LKHERDNAVQQVNE 135
Score = 43 (20.2 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 215 GELICKHKTLSTHAVPKEP 233
G++IC K L +PK P
Sbjct: 52 GDIICFQKILKPPDIPKYP 70
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 132 (51.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P+EF C I+ LM DPV+ + G ++E+ ++ W + T P T++ L + +TPN +K
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLK 464
Query: 322 ELISQWCLKH 331
I++W H
Sbjct: 465 MAINRWLETH 474
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 210 LLRKYGELICKHKTLSTHAVPKE 232
+LRK EL K K+LS+ +P E
Sbjct: 386 VLRKIEELRTKVKSLSS-GIPDE 407
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 220 KHK-TLSTHAVPKEPCHQSIEAQAKLGNEWDENPV 253
K+K TLS H P C S + Q + D++ +
Sbjct: 230 KYKSTLSGHCAPVLACAFSHDGQMLVSGSVDKSVI 264
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 127 (49.8 bits), Expect = 0.00028, P = 0.00028
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P F C I +M DP V A G T+E I+ W ++ H T P T+++L + S+ N A++
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALR 823
Query: 322 ELISQWCLKH 331
I +W L+H
Sbjct: 824 SAIQEW-LQH 832
>TAIR|locus:2079716 [details] [associations]
symbol:CHIP "carboxyl terminus of HSC70-interacting
protein" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009266
"response to temperature stimulus" evidence=IEP;IMP] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0009737 "response to
abscisic acid stimulus" evidence=IMP] [GO:0051087 "chaperone
binding" evidence=IPI] [GO:0007165 "signal transduction"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009414 "response to water deprivation" evidence=RCA]
[GO:0009610 "response to symbiotic fungus" evidence=RCA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] [GO:0009733 "response
to auxin stimulus" evidence=RCA] [GO:0009738 "abscisic acid
mediated signaling pathway" evidence=RCA] [GO:0009753 "response to
jasmonic acid stimulus" evidence=RCA] [GO:0042538 "hyperosmotic
salinity response" evidence=RCA] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 UniPathway:UPA00143 GO:GO:0009737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009651 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0009266 GO:GO:0000151
EMBL:AC009853 EMBL:AY042807 EMBL:AY064647 IPI:IPI00547964
RefSeq:NP_566305.1 UniGene:At.18421 HSSP:Q9WUD1
ProteinModelPortal:Q9SRS9 SMR:Q9SRS9 STRING:Q9SRS9
EnsemblPlants:AT3G07370.1 GeneID:819925 KEGG:ath:AT3G07370
TAIR:At3g07370 eggNOG:NOG260504 HOGENOM:HOG000163725
InParanoid:Q9SRS9 KO:K09561 OMA:LEWEEES PhylomeDB:Q9SRS9
ProtClustDB:CLSN2688144 Genevestigator:Q9SRS9 Uniprot:Q9SRS9
Length = 278
Score = 117 (46.2 bits), Expect = 0.00059, P = 0.00058
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVA 319
E P+ C+I+L + DPV+ SG T+ER I + P T ++D ++ PN+A
Sbjct: 199 EVPDYLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGKFDPITREKIDPANLVPNLA 258
Query: 320 IKELISQWCLKH 331
IKE ++ + KH
Sbjct: 259 IKEAVAAYLEKH 270
>TAIR|locus:2116792 [details] [associations]
symbol:AT4G31890 "AT4G31890" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161579 EMBL:AL049607 HOGENOM:HOG000243144
ProtClustDB:CLSN2683147 EMBL:BT033029 EMBL:AK228494 IPI:IPI00537660
PIR:T06311 RefSeq:NP_001190883.1 RefSeq:NP_194917.1
UniGene:At.44088 ProteinModelPortal:Q9SZ56 SMR:Q9SZ56 PRIDE:Q9SZ56
EnsemblPlants:AT4G31890.1 EnsemblPlants:AT4G31890.2 GeneID:829319
KEGG:ath:AT4G31890 TAIR:At4g31890 eggNOG:NOG319234
InParanoid:Q9SZ56 OMA:ASRILEC PhylomeDB:Q9SZ56 ArrayExpress:Q9SZ56
Genevestigator:Q9SZ56 Uniprot:Q9SZ56
Length = 518
Score = 121 (47.7 bits), Expect = 0.00065, P = 0.00065
Identities = 73/324 (22%), Positives = 141/324 (43%)
Query: 439 AVENIKKLLKDNGQSR-HLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAILSQSR 497
A ++ L K++ ++R LA L + + PL+ + D+ + DA+ A + L I + +
Sbjct: 163 AASEVRLLAKEDSEARVTLAMLGA-IPPLVSMIDDSR-IVDAQIASLYALLNLGIGNDAN 220
Query: 498 D----EMPLFHKD-EICTFALFLDSEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKF 552
+ HK ++ D EI E + LS + + +SG I ++K
Sbjct: 221 KAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVKT 280
Query: 553 L----DTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPILSSYCIKIIK 608
L +T + ++RE A++ L NLS V IL D + L+ L D +S + I+
Sbjct: 281 LQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGDMEVSERILAILS 340
Query: 609 AL-CTSEARAAVAESNPCIDSIAKLLE-TGTREEQEHIVDVLLSLCHEHTKYCQLANTES 666
L E R A+ + +L T + QE +L+ + H+ Q+
Sbjct: 341 NLVAVPEGRKAIGLVCDAFPVLVDVLNWTDSPGCQEKATYILMLMAHKGYGDRQVMIEAG 400
Query: 667 IIQCVVDISVNGNSRGKETAKELIMLL--DHCKE--DNASECSTLRADML--HDSSSHHT 720
I ++++++ G++ ++ A ++ L D K+ D+ C L A + D+ H
Sbjct: 401 IESALLELTLLGSALAQKRASRILECLRVDKGKQVLDSTGSCGALSAPIYGTRDNGLDHE 460
Query: 721 DNKTS-SVASRFLGRKIARFLRSN 743
+N S + + + + + L+SN
Sbjct: 461 ENDLMMSEERKAVKQLVQQSLQSN 484
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 744 715 0.00084 121 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 65
No. of states in DFA: 621 (66 KB)
Total size of DFA: 381 KB (2186 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 61.92u 0.11s 62.03t Elapsed: 00:00:03
Total cpu time: 61.94u 0.11s 62.05t Elapsed: 00:00:03
Start: Tue May 21 00:07:59 2013 End: Tue May 21 00:08:02 2013