BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004582
(744 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 243/698 (34%), Positives = 394/698 (56%), Gaps = 54/698 (7%)
Query: 16 TVKVHRLMCLELKTLINKISHIHSDIESARPGCTSGIHVLCSFHVAVDKSKLLIQYCSES 75
+ K+H MCLELK L+++I I DIE ARPGC+SGI LC H A+DK+K L+QYCSES
Sbjct: 12 SYKMHSSMCLELKRLVDRIMRIFPDIEDARPGCSSGIQTLCLLHNALDKTKQLLQYCSES 71
Query: 76 SKLYLAITADRIQMKFERVRNTLELCLSQIQNIVPSLLAAKVSDIIHDIRNAKFPLEPSE 135
SKLY+A+T D I + R + +LE CL+ I++IVP++L K+S I+ D+R+ + LE SE
Sbjct: 72 SKLYMAVTGDAILARGSRAKKSLEQCLNDIRSIVPTILEIKISQIVQDLRSTQLTLEFSE 131
Query: 136 DEAGKVLLALLHRGISASSFINQLELEALQLAALRLNITSPLALLIEKRSIKRLLQKICD 195
+EAGK + L+ + S+S+ + E++ AAL+L +++P A++ E+RS+K
Sbjct: 132 EEAGKAIRELMQKSTSSSASPD--EIKDFHYAALKLQLSTPEAIVTERRSLK-------- 181
Query: 196 TDTTRKKVLKCLLYLLRKYGELICK-HKTLS-THAVPKEPCHQSIEAQAKLGNEWDENPV 253
+IC+ HK S TH HQSI+ E
Sbjct: 182 ---------------------IICEDHKQNSFTH-------HQSIDDSLHANAAEAEASE 213
Query: 254 NESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVS 313
+G L PE+FKC++S +MYDPV+I+SG TFER+ IQKWF+ G+ +CP + +LD+ +
Sbjct: 214 EHNGTL--PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFT 271
Query: 314 VTPNVAIKELISQWCLKHGISIPEPHSQPMPALLSSRKTSSSSSVASFGSSMDDLCLHVS 373
+ PNV +K IS+WC K+G+ + +P + + A S S S+ASFGSS+ ++ H S
Sbjct: 272 LKPNVELKSQISEWCAKNGLDVQDPARKHVKA---SNSIDFSVSIASFGSSLYNIPDH-S 327
Query: 374 NVSFSSSDTDHDLHPSNGKTDDGLSCASPLK--NANSHRYQSSMIRHGTDLTSLSKLASR 431
+S + ++ + + S+ +P++ ++ S + ++ L L +
Sbjct: 328 GISITDFNSSYSIDSSSYSKMSKGGYFTPMQRIDSASGAGDTDSSHSEIEIDPLCGLTNL 387
Query: 432 PWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDA--HNLCDAKAQKDGAEVL 489
PW +Q VE+++ + + ++ + +++PLI +LK+A N + K G ++L
Sbjct: 388 PWDAQIKVVEDVRSRFEHSTRAFRSMSPSKFLEPLITYLKNALERNGTAGEIIKGGLDLL 447
Query: 490 LAILSQSRDEMPLFHKDEICTFALFLDSEIM-EEALEIIEVLSHQQNYASELVASGIIPS 548
LA LS +R + ++ F++FL+SE++ EEAL I+EVLS+ + S++ +SG + S
Sbjct: 448 LAFLSGNRRAIESLEEEVFKMFSVFLESEVVAEEALNILEVLSNHPHGPSKITSSGSLSS 507
Query: 549 IIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPILSSYCIKIIK 608
++K +++ +E A+ L NLSS I ++ LD KL L+ + + I I+K
Sbjct: 508 LLKIVESQAEHLQEQAMITLKNLSSSMEICLEMVSLDFIQKLTSFLQQKVFCKHSIIILK 567
Query: 609 ALCTSE-ARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANTES- 666
LC++E R + E+ C+ SIA+LLE+ EEQE+ + +LL LC + +YC L E+
Sbjct: 568 NLCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILLQLCVQKIEYCCLVVREAT 627
Query: 667 -IIQCVVDISVNGNSRGKETAKELIMLLDHCKEDNASE 703
I ++ IS NG K +A EL+ L D E
Sbjct: 628 DIYSSLILISNNGTEEVKVSASELLRALVEVDSDKEEE 665
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 313 bits (802), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 233/739 (31%), Positives = 381/739 (51%), Gaps = 85/739 (11%)
Query: 4 DVAESVELPFYCT-VKVHRLMCLELKTLINKISHIHSDIESARPGCTSGIHVLCSFHVAV 62
DV+E E F + K+H MC EL + K+ I +E ARP SGI LCS H+A+
Sbjct: 2 DVSELEENLFAASDAKLHGDMCKELSAVYCKVLSIFPSLEEARPRSKSGIQTLCSLHIAL 61
Query: 63 DKSKLLIQYCSESSKLYLAITADRIQMKFERVRNTLELCLSQIQNIVPSLLAAKVSDIIH 122
+K+K ++Q+CSE SKLYLAIT D + +KFE+ ++ L L ++++IVPS + +++ DI+
Sbjct: 62 EKAKNILQHCSECSKLYLAITGDAVLLKFEKAKSALIDSLRRVEDIVPSSIGSQILDIVG 121
Query: 123 DIRNAKFPLEPSEDEAGKVLLALLHRGISASSFINQLELEALQLAALRLNITSPLALLIE 182
++ + KF L+PSE E G ++ALL +G + + ELE AA RL+ITS + L E
Sbjct: 122 ELEHTKFLLDPSEKEVGDRIIALLQQGKKFDNGSDSTELEIFHQAATRLSITSSRSALAE 181
Query: 183 KRSIKRLLQKI-CDTDTTRKKVLKCLLYLLRKYGELI-----------CKHKTLSTHAVP 230
+R++K+++ + + D ++ ++ LL+L+RKY +L C T P
Sbjct: 182 RRALKKVIDRARVEEDKRKESIVAYLLHLMRKYSKLFRSEMMDENDSPCSTPCSPTGQGP 241
Query: 231 KEPCHQSIEAQAKLGNEWDENPVN--ESGVLE-PPEEFKCSISLRLMYDPVVIASGKTFE 287
E + Q + P+N +SG + PPEE +C ISL+LMYDPV+IASG+T+E
Sbjct: 242 NEDRVNAFGRQLSKFGSINYKPMNSRKSGQMPIPPEELRCPISLQLMYDPVIIASGQTYE 301
Query: 288 RVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKELISQWCLKHGISIPEPHSQPMPAL- 346
RV I+KWF+ GH +CPKT +L ++S+TPN +K LI+ WC ++GI++P + P +L
Sbjct: 302 RVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVKGLIASWCEQNGITVP---TGPPESLD 358
Query: 347 -------LSSRKTSSSSSVASFGSSMDDLCL--HVSNVSFSSSDTDHDLHPSNGKTDDGL 397
+S ++ +S SV S G LC + V S T K +
Sbjct: 359 LNYWRLAMSDSESPNSKSVDSVG-----LCTPKDIRVVPLEESSTIESERQQKEKNNAPD 413
Query: 398 SCASPLKNANSHRYQSSMIRHGTDLTSLSKLASRPWGSQCDAVENIKKLLKDNGQSRHLA 457
S + ++ +++ DL +C VEN++ LLKDN ++R L
Sbjct: 414 EVDSEINVLEGYQDILAIVDKEEDL-----------AKKCKVVENVRILLKDNEEARILM 462
Query: 458 FLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVL--LAILSQSRDEM-------PLFHKDEI 508
N +V+ ++FL+ A + +A AQ+ GA L LA+ + E+ PL K
Sbjct: 463 GANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLEKMIS 522
Query: 509 CT------FALFLDSEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRE 562
C+ AL+L+ +E+A +I +S + + L T+ +
Sbjct: 523 CSQSQGPATALYLNLSCLEKAKPVIG-------------SSQAVSFFVNLLLQDTKTQCK 569
Query: 563 L-AIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPILSSYCIKIIKALC-------TSE 614
L A+ L NLS+ + +L +S +++ L+ + + I K+L + E
Sbjct: 570 LDALHALYNLSTYSPNIPTLL----SSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSRE 625
Query: 615 ARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDI 674
+ + + I ++A +L+TG EQE V L+ LC Q+ E +I +V I
Sbjct: 626 GKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLVSI 685
Query: 675 SVNGNSRGKETAKELIMLL 693
SVNG+ RG++ +++L+ML
Sbjct: 686 SVNGSPRGRDKSQKLLMLF 704
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 310 bits (793), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 231/720 (32%), Positives = 367/720 (50%), Gaps = 46/720 (6%)
Query: 4 DVAESVELPFYCT-VKVHRLMCLELKTLINKISHIHSDIESARPGCTSGIHVLCSFHVAV 62
DV E E F + K+H MC EL ++ K+ I +E ARP SGI LCS H+A+
Sbjct: 2 DVTELEENLFAASDAKLHGDMCKELSGVLCKVLSIFPSLEGARPRSKSGIQALCSLHIAL 61
Query: 63 DKSKLLIQYCSESSKLYLAITADRIQMKFERVRNTLELCLSQIQNIVPSLLAAKVSDIIH 122
+K+K ++Q+CSE SKLYLAIT D + +KFE+ + L L ++++IVPS + +++ +I+
Sbjct: 62 EKAKNILQHCSECSKLYLAITGDAVLLKFEKAKIALIDGLKRVEDIVPSSIGSQILEIVG 121
Query: 123 DIRNAKFPLEPSEDEAGKVLLALLHRGISASSFINQLELEALQLAALRLNITSPLALLIE 182
++ N +F L+PSE E G ++ALL +G + + ELE AA RL+ITS L E
Sbjct: 122 ELENTRFMLDPSEKEVGDQIIALLQQGKKFDNCNDNTELEIFHRAATRLSITSSRVALAE 181
Query: 183 KRSIKRLLQKI-CDTDTTRKKVLKCLLYLLRKYGELICKHKTLSTHAVPKE-PC-----H 235
+R++K+L+ + + D ++ ++ LL+L+RK +L + + L + P PC H
Sbjct: 182 RRALKKLIDRARAEEDKRKESIVAYLLHLMRKCSKLF-RSEILDENDSPGSYPCSPNEDH 240
Query: 236 QSIEA----QAKLG--NEWDENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERV 289
S+ ++ G N+ N +N + PPEE +C ISL+LM DPV+IASG+T+ERV
Sbjct: 241 GSVHGFGRQLSRFGSLNDKPMNSINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERV 300
Query: 290 WIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKELISQWCLKHGISIPE--PHSQPMPAL- 346
I+KWF+ GH TCPKT +L ++S+TPN +K LI+ WC ++G IP P SQ +
Sbjct: 301 CIEKWFSDGHNTCPKTQQQLPHISLTPNNCVKGLIASWCEQNGTQIPSGPPESQDLDYWR 360
Query: 347 --LSSRKTSSSSSVASFGSSMDDLCLHVSNVSFSSSDTDHDLHPSNGKTDDGLSCASPLK 404
LS +++ S SV S GS + V + + T++ +
Sbjct: 361 LALSDSESTKSQSVNSIGS------YKLKGVKIVPLEENGTTVVERQNTEESFVSDDDDE 414
Query: 405 NANS----HRYQSSMIRHGTDLTSLSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLN 460
+ RYQ ++ + L K +C VE I+ LLKD+ ++R N
Sbjct: 415 EDSDINVLERYQ-DLLAVLNEEEGLEK--------KCKVVEKIRLLLKDDEEARIFMGAN 465
Query: 461 SYVKPLIKFLKDAHNLCDAKAQKDGAEVL--LAILSQSRDEMPLFHKDEICTFALFLDSE 518
+V+ L++FL A + +A AQ GA L LA+ + E+ L + +E
Sbjct: 466 GFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAE 525
Query: 519 IMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESREL-AIKILCNLSSGDNI 577
A + LS S + +S +P +++ L +L A+ L NLS+
Sbjct: 526 SHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPN 585
Query: 578 VYHILYLDCTSKLVRLL----EDPILSSYCIKIIKALCTSEARAAVAESNPCIDSIAKLL 633
+ +L + L LL E+ + ++ + E + S I S+A +L
Sbjct: 586 IPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVL 645
Query: 634 ETGTREEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLL 693
+ G EQE V LL LC+ Q+ E +I +V ISVNG RG+E +++L+ML
Sbjct: 646 DMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLF 705
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 295 bits (755), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 240/767 (31%), Positives = 391/767 (50%), Gaps = 97/767 (12%)
Query: 4 DVAESVELPFYCT--VKVHRLMCLELKTLINKISHIHSDIESARPGCTSGIHVLCSFHVA 61
DV E VE F+ K+H MC L + KI I +E+ARP SGI LCS HV
Sbjct: 2 DVNE-VEENFFAPGDAKLHGKMCNALSVIYCKIMSIFPSLEAARPRSKSGIQALCSLHVV 60
Query: 62 VDKSKLLIQYCSESSKLYLAITADRIQMKFERVRNTLELCLSQIQNIVPSLLAAKVSDII 121
++K K ++++C+ESSKLYLAIT D + +KFE+ +++L L ++++IV + +++ +I+
Sbjct: 61 LEKVKNILRHCTESSKLYLAITGDSVVLKFEKAKSSLTDSLRRVEDIVQQSIGSQLLEIL 120
Query: 122 HDIRNAKFPLEPSEDEAGKVLLALLHRGISASSFINQLELEALQLAALRLNITSPLALLI 181
++ N +F L+P+E E G ++ LL +G + S + ELE AA RL ITS A L
Sbjct: 121 MELENTEFSLDPAEKEIGDQIIGLLQQGGNFESSSDNNELEVFHQAATRLGITSSRAALT 180
Query: 182 EKRSIKRLLQKICDTDTTRKK-VLKCLLYLLRKYGELICK-----HKTLSTHAVPKEPCH 235
E+R +K+L+++ D RK+ ++ LL+L+RKY +L + + + ++P P
Sbjct: 181 ERRCLKKLIERARMEDDKRKESIVAYLLHLMRKYSKLFRSEIWDDNDSQGSSSLPCSPTI 240
Query: 236 QSIEAQAKLGNEWDE--------------NPVNESGVLEPPEEFKCSISLRLMYDPVVIA 281
Q A G +D N S + PPEE +C ISL+LMYDPV+IA
Sbjct: 241 QGSIDDAH-GRAFDRQLSKLSSFNFRSCNNNRRSSQMSVPPEELRCPISLQLMYDPVIIA 299
Query: 282 SGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKELISQWCLKHGISIPE--PH 339
SG+T+ER+ I+KWF+ GH TCPKTH +L ++ +TPN +K LIS WC ++G+ +P+ P
Sbjct: 300 SGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVKALISSWCEQNGVQVPDGPPE 359
Query: 340 SQPMPAL---LSSRKTSSSSSVASFGS-SMDDLCLHVSNVSFSSSDTDHDLHPSNGKTDD 395
S + LS +++ + S GS + D V V S T + + +D
Sbjct: 360 SLDLNYWRLALSVSESTDTRSAKRVGSCKLKD----VKVVPLEESGTIKEEACESEYQED 415
Query: 396 GLSCASPLKNANSHRYQSSMIRHGTDLTSLSKLASRPWGSQCDAVENIKKLLKDNGQSRH 455
++ + ++ TD+ +L K +C VE I+ LLKD+ ++R
Sbjct: 416 QVTLVERC---------TELLTTLTDVDTLRK--------KCRVVEQIRVLLKDDEEARI 458
Query: 456 LAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVL--LAILSQSRDEM-------PLFHKD 506
L N V+ L++FL A N +A AQK GA L LA+ + E+ PL ++
Sbjct: 459 LMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLL-EE 517
Query: 507 EIC-------TFALFLDSEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTR- 558
+C A++L+ +EEA +I +S +P ++ L T T
Sbjct: 518 MLCNPHSHGSVTAIYLNLSCLEEAKPVIG-------------SSLAVPFMVNLLWTETEV 564
Query: 559 ESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLL--EDPILSSYCIKIIKALCTSEAR 616
+ + A+ L +LS+ + +L D + L L ++ + + ++ L +EA
Sbjct: 565 QCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLNEAG 624
Query: 617 AAVAESNPC-IDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYC-QLANTESIIQCVVDI 674
S P + ++ +L+TG EQE V +LL LC+ H++ C ++ E +I +V I
Sbjct: 625 KDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCN-HSEICSEMVLQEGVIPSLVSI 683
Query: 675 SVNGNSRGKETAKELIMLLDHCKEDNASECSTLRADMLHDSSSHHTD 721
SVNG RG+E A++L+ L ++ D H + HT+
Sbjct: 684 SVNGTQRGRERAQKLLTLFRELRQ----------RDQTHLTEPQHTE 720
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 210/482 (43%), Gaps = 62/482 (12%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P +F+CS+SL LM DPV++ASG+TFERV+IQKW + G CPKT L + ++TPN ++
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVR 300
Query: 322 ELISQWCLKHGISIPEP-----HSQPMPALLSSRKTSSSS------------------SV 358
++ WC + + P+P S+P P L+ S + SSS S
Sbjct: 301 AFLASWCETNNVYPPDPLELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQVFSRSA 360
Query: 359 ASFG-------------SSMDDLCLHVSNVSFSSSDTDHDLHPSNGKTDDGLSCASPLKN 405
++ G ++ D L SN + + H HP G+ A+ +
Sbjct: 361 SAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHP-------GIIPATVRET 413
Query: 406 ANSHRYQSSMIRHGTDLTSLSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKP 465
+S ++ + + DL S S +Q +A I+ L +++ +R + +
Sbjct: 414 GSSSSIETEVKKLIDDLKSSS------LDTQREATARIRILARNSTDNRIVIARCEAIPS 467
Query: 466 LIKFLKDAHNLCDAKAQKDGAEVLLAILSQSRDEMPLFHKDEICTFALFLDSEIMEEA-- 523
L+ L D + Q D LL + ++ + I L + +EEA
Sbjct: 468 LVSLLYS----TDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKA 523
Query: 524 --LEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHI 581
+ LS + Y +E+ +G I ++ L +G+ ++ A L NLS +
Sbjct: 524 NSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKV 583
Query: 582 LYLDCTSKLVRLLEDPILS--SYCIKIIKALCT-SEARAAVAESNPCIDSIAKLLETGTR 638
+ LV L+ DP + ++ L T E + A+ E I + +++E G+
Sbjct: 584 IEAGAVRYLVELM-DPAFGMVEKAVVVLANLATVREGKIAIGEEG-GIPVLVEVVELGSA 641
Query: 639 EEQEHIVDVLLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKE 698
+E+ LL LC K+C E +I +V ++ +G +RGKE A+ L+ ++
Sbjct: 642 RGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQ 701
Query: 699 DN 700
N
Sbjct: 702 SN 703
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 148/322 (45%), Gaps = 41/322 (12%)
Query: 27 LKTLINKISHIHSDIESARPGCTSGIHVLCSFHVAVDKSKLLIQYCSESSKLYLAITADR 86
LK LI + I ES P C H L +K L++ CS SK+Y+A+ +
Sbjct: 85 LKILIPFLDEIRG-FES--PSCK---HFLNRLRKVFLAAKKLLETCSNGSKIYMALDGET 138
Query: 87 IQMKFERVRNTLELCLSQI---QNIVPSLLAAKVSDIIHDIRNAKFPLEPSEDEAGKVLL 143
+ +F + L L + + ++ ++ + ++ AK + + E ++
Sbjct: 139 MMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKAKRRTDTQDIELAVDMM 198
Query: 144 ALLHRGI---SASSFINQLELEALQLAALRLNITSPLALLIEKRSIKRLLQKICDTDTTR 200
+ + + S+ I +L A +L + + L E +I+ L+Q D
Sbjct: 199 VVFSKTDPRNADSAIIERL--------AKKLELQTIDDLKTETIAIQSLIQ---DKGGLN 247
Query: 201 KKVLKCLLYLLRKYGELICKHKTLSTHAVPKEPCHQSIEAQAKLGNEWDENPVNESGVLE 260
+ + ++ LL K+ +L Q +EA L + +S L
Sbjct: 248 IETKQHIIELLNKFKKL------------------QGLEATDILYQPVINKAITKSTSLI 289
Query: 261 PPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAI 320
P EF C I+L +M DPV+IA+G+T+E+ IQKWF+AGH TCPKT LD++S+ PN A+
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFAL 349
Query: 321 KELISQWCLKHGISIPEPHSQP 342
K LI QWC K+ IPE P
Sbjct: 350 KNLIMQWCEKNNFKIPEKEVSP 371
Score = 37.7 bits (86), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 91/229 (39%), Gaps = 45/229 (19%)
Query: 514 FLDSEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSS 573
+ DS I E A+ + LS + + G IP+II+ L+ G RE+RE + L +LS
Sbjct: 432 YPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSM 491
Query: 574 GDNIVYHILYLDCTSKLVRLLE--------DPILSSYCIKIIKA---------------- 609
D I + LV LL+ D + + + + + A
Sbjct: 492 LDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLN 551
Query: 610 --------------------LCTSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLL 649
E R A+ + + I+++ + + GT + +E VLL
Sbjct: 552 LLKDKNLGMIDEALSILLLLASHPEGRQAIGQLS-FIETLVEFIRQGTPKNKECATSVLL 610
Query: 650 SLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKE 698
L ++ + A + + +V+I+ +G +R + A LI L+ ++
Sbjct: 611 ELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQRKANALIQLISKSEQ 659
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 148/297 (49%), Gaps = 30/297 (10%)
Query: 52 IHVLCSFHVAVDKSKLLIQYCSESSKLYLAITADRIQMKFERVRNTLELCLSQI--QNI- 108
++ L S ++ +K L+ + S SK+YL + D++ +KF++V + LE LS I +N+
Sbjct: 62 VNALLSVKQSLLHAKDLLSFVSHVSKIYLVLERDQVMVKFQKVTSLLEQALSIIPYENLE 121
Query: 109 VPSLLAAKVSDIIHDIRN--AKFPLEPSEDEAGKVLLALLH-RGISASSFINQLELEALQ 165
+ L +V ++ +R K + +DE K +L+L RG S + + E LQ
Sbjct: 122 ISDELKEQVELVLVQLRRSLGKRGGDVYDDELYKDVLSLYSGRGSVMESDMVRRVAEKLQ 181
Query: 166 LAALRLNITSPLALLIEKRSIKRLLQKICDTDTTRKKVLKCLLYLLRKYGELICKHKTLS 225
L + LALL ++ D + + +L+K + + +
Sbjct: 182 LMTITDLTQESLALL-------DMVSSSGGDDPGES--FEKMSMVLKKIKDFVQTYNP-- 230
Query: 226 THAVPKEPCHQSIEAQAKLGNEWDENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKT 285
+A +L + ++ ++ +L PPEEF+C ISL LM DPV+++SG+T
Sbjct: 231 ----------NLDDAPLRLKSSLPKSRDDDRDMLIPPEEFRCPISLELMTDPVIVSSGQT 280
Query: 286 FERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKELISQWCLKHGISIPEPHSQP 342
+ER I+KW GH TCPKT L + +TPN ++ LI+QWC +GI EP +P
Sbjct: 281 YERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLRSLIAQWCESNGI---EPPKRP 334
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 542 ASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDP---- 597
A+G IP ++ L G++ ++ A L NL + L+RLL +P
Sbjct: 479 AAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGM 538
Query: 598 ILSSYCI-KIIKALCTSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHT 656
+ S I I+ + ++ A++ P + + +G+ +E+ VL+ LC +
Sbjct: 539 VDESLSILAILSSHPDGKSEVGAADAVPVL---VDFIRSGSPRNKENSAAVLVHLCSWNQ 595
Query: 657 KYCQLANTESIIQCVVDISVNGNSRGKETAKELI 690
++ A I+ +++++ NG RGK A +L+
Sbjct: 596 QHLIEAQKLGIMDLLIEMAENGTDRGKRKAAQLL 629
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 58/76 (76%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P+EF+C ISL LM DPV+++SG+T+ER IQKW ++GH TCPKT L + S+TPN +K
Sbjct: 229 PDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLK 288
Query: 322 ELISQWCLKHGISIPE 337
LISQWC +GI +P+
Sbjct: 289 SLISQWCEANGIELPK 304
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 85/229 (37%), Gaps = 45/229 (19%)
Query: 516 DSEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGD 575
D E A+ + LS +N + +V S IP I++ L TG+ E+RE A L +LS D
Sbjct: 378 DPRTQEHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVD 437
Query: 576 NIVYHILYLDCTSKLVRLLEDP----------------ILSSYCIKIIKA---------- 609
I L+ LL D I ++ +KA
Sbjct: 438 ENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFL 497
Query: 610 ------------------LCTSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSL 651
E + +A S P I + ++++TG+ +E+ +L L
Sbjct: 498 VDPTGGMIDEALSLLSILAGNPEGKIVIARSEP-IPPLVEVIKTGSPRNRENAAAILWLL 556
Query: 652 CHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKEDN 700
C T+ A + + ++S G R K A ++ L+ ED+
Sbjct: 557 CSADTEQTLAAKAAGVEDALKELSETGTDRAKRKASSILELMHQANEDS 605
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 6/112 (5%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P++F+C ISL +M DPV+++SG+T+ER I+KW GH+TCPKT L + ++TPN ++
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLR 316
Query: 322 ELISQWCLKHGISIPEPHSQPMPALLSSRKTSSSSSVASFGSSMDDLCLHVS 373
LI+QWC + I P+P P+ L RK SS SS A + ++DL ++
Sbjct: 317 SLIAQWCEANDIEPPKP-----PSSLRPRKVSSFSSPAE-ANKIEDLMWRLA 362
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 43/226 (19%)
Query: 516 DSEIMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGD 575
DS I E ++ + LS +N +V++G IP I++ L G+ E+RE A L +LS D
Sbjct: 407 DSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVID 466
Query: 576 NIVYHILYLDCTSKLVRLLEDPI----------LSSYCI------KIIKA--------LC 611
I L LV LL + L + CI K I+A L
Sbjct: 467 ENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLL 526
Query: 612 TSEARAAVAE-------------------SNPCIDSIAKLLETGTREEQEHIVDVLLSLC 652
T V E S+ + S+ + + TG+ +E+ VL+ LC
Sbjct: 527 TEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLC 586
Query: 653 HEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKE 698
++ A ++ ++D++ NG RGK A +L+ + E
Sbjct: 587 SGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERISRLAE 632
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 463 VKPLIKFLKDAHNLCDAKAQKDGAEVLLAILSQSRDEMPLFHKDEICTFALFL---DSEI 519
+ PL+ L + + +KD A L + ++ I T L S +
Sbjct: 478 IPPLVVLLNEGTQ----RGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGM 533
Query: 520 MEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGD 575
++EAL I+ +LS + + +S +PS+++F+ TG+ +RE A +L +L SGD
Sbjct: 534 VDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGD 589
Score = 37.7 bits (86), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 27 LKTLINKISHIHSDIESARPGCTSGIHVLCSFHVAVDKSKLLIQYCSESSKLYLAITADR 86
LK L+ I ES P + L + A+ +K +++CS+ SK+YL + ++
Sbjct: 40 LKLLVPMFEEIR---ESNEPISEDTLKTLMNLKEAMCSAKDYLKFCSQGSKIYLVMEREQ 96
Query: 87 IQMKFERVRNTLELCLSQI---QNIVPSLLAAKVSDIIHDIRNAKFPLEPSEDEAGKVLL 143
+ K V LE LSQI + + + +V ++ R AK ++ S+DE + L
Sbjct: 97 VTSKLMEVSVKLEQSLSQIPYEELDISDEVREQVELVLSQFRRAKGRVDVSDDELYEDLQ 156
Query: 144 ALLHRGISASSFINQLELEALQL 166
+L ++ ++ LE A +L
Sbjct: 157 SLCNKSSDVDAYQPVLERVAKKL 179
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
PEEF+C +S LM DPVV+ASG+T+++++IQKW ++G+ TCPKT L + ++TPN+ I+
Sbjct: 75 PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIR 134
Query: 322 ELISQWCLKHGISIPEPHSQPMPALLSSRKTSSSSSVASFGS 363
E+IS+WC K+G+ E SQ P L++ +T + S F S
Sbjct: 135 EMISKWCKKNGL---ETKSQYHPNLVNEDETVTRSDREIFNS 173
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 56/75 (74%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
PE+F C ISL LM DP ++++G+T+ER +IQ+W + G+ +CPKT +L+N ++TPN ++
Sbjct: 244 PEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLR 303
Query: 322 ELISQWCLKHGISIP 336
LISQWC KH I P
Sbjct: 304 SLISQWCTKHNIEQP 318
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 60/85 (70%)
Query: 255 ESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSV 314
+S L P +F C +SL LM DPV++A+G+T+ER +IQ+W + G+ TCPKT +L+N ++
Sbjct: 235 KSDKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTL 294
Query: 315 TPNVAIKELISQWCLKHGISIPEPH 339
TPN ++ LIS+WC +H I P +
Sbjct: 295 TPNYVLRSLISRWCAEHNIEQPAGY 319
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 124/282 (43%), Gaps = 24/282 (8%)
Query: 425 LSKLASRPWGSQCDAVENIKKLLKDNGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKD 484
+ +L+SR + +AV I+ L K + +R L + L+ L D Q++
Sbjct: 337 VQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSE----DVATQEN 392
Query: 485 GAEVLLAI-LSQSRDEMPLFHKDEICTFALFLDSEIME---EALEIIEVLSHQQNYASEL 540
+L + + ++ E+ +F + + L + ME A + LS +
Sbjct: 393 AITCVLNLSIYENNKELIMFA-GAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIII 451
Query: 541 VASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYH-----ILYLDCTSKLVRLLE 595
SG IP+++ L+ GT ++ A L NL +YH + + LV++L
Sbjct: 452 GGSGAIPALVDLLENGTPRGKKDAATALFNLC-----IYHGNKGRAVRAGIVTALVKMLS 506
Query: 596 DPI---LSSYCIKIIKALCTSE-ARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSL 651
D + + I+ L ++ A++A+ ++N + ++ +L+T +E+ +LLSL
Sbjct: 507 DSTRHRMVDEALTILSVLANNQDAKSAIVKAN-TLPALIGILQTDQTRNRENAAAILLSL 565
Query: 652 CHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLL 693
C T+ + ++D+S NG RGK A L+ LL
Sbjct: 566 CKRDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLLELL 607
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 3/95 (3%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P+EF+C ISL LM DPV++++G+T+ER I+KW +GH TCP T ++ ++TPN ++
Sbjct: 274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLR 333
Query: 322 ELISQWCLKHGISIPEPHSQ---PMPALLSSRKTS 353
LISQWC +G+ P+ +Q P PA SS + +
Sbjct: 334 SLISQWCETNGMEPPKRSTQPNKPTPACSSSERAN 368
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 48/205 (23%)
Query: 532 HQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLV 591
H+ N AS +++SG +PSI+ L G+ E+RE A L +LS D I + LV
Sbjct: 439 HEDNKAS-IISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALV 497
Query: 592 RLLED----------PILSSYCI--------------KIIKALCTS-------------- 613
LL + L + CI +I L T+
Sbjct: 498 VLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILS 557
Query: 614 ------EARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANTE-- 665
E +AA+ + P + + +++ +GT +E+ V+L LC LA +
Sbjct: 558 ILSSHPEGKAAIGAAEP-VPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQEC 616
Query: 666 SIIQCVVDISVNGNSRGKETAKELI 690
I+ + ++++NG RGK A +L+
Sbjct: 617 GIMVPLRELALNGTDRGKRKAVQLL 641
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 39/63 (61%)
Query: 519 IMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIV 578
+M+EA+ I+ +LS + + A+ +P +++ + +GT +RE A ++ +L SG++ +
Sbjct: 548 LMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHL 607
Query: 579 YHI 581
H+
Sbjct: 608 VHL 610
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 3/95 (3%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P+EF+C ISL LM DPV++++G+T+ER I+KW +GH TCP T ++ ++TPN ++
Sbjct: 274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLR 333
Query: 322 ELISQWCLKHGISIPEPHSQ---PMPALLSSRKTS 353
LISQWC +G+ P+ +Q P PA SS + +
Sbjct: 334 SLISQWCETNGMEPPKRSTQPNKPTPACSSSERAN 368
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 48/205 (23%)
Query: 532 HQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLV 591
H+ N AS +++SG +PSI+ L G+ E+RE A L +LS D I + LV
Sbjct: 439 HEDNKAS-IISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALV 497
Query: 592 RLLED----------PILSSYCI--------------KIIKALCTS-------------- 613
LL + L + CI +I L T+
Sbjct: 498 VLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILS 557
Query: 614 ------EARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANTE-- 665
E +AA+ + P + + +++ +GT +E+ V+L LC LA +
Sbjct: 558 ILSSHPEGKAAIGAAEP-VPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQEC 616
Query: 666 SIIQCVVDISVNGNSRGKETAKELI 690
I+ + ++++NG RGK A +L+
Sbjct: 617 GIMVPLRELALNGTDRGKRKAVQLL 641
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 39/63 (61%)
Query: 519 IMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIV 578
+M+EA+ I+ +LS + + A+ +P +++ + +GT +RE A ++ +L SG++ +
Sbjct: 548 LMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHL 607
Query: 579 YHI 581
H+
Sbjct: 608 VHL 610
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 55/76 (72%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
PE F+C ISL LM DPV++++G+T+ER IQKW +AGH TCPK+ L + +TPN +K
Sbjct: 249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLK 308
Query: 322 ELISQWCLKHGISIPE 337
LI+ WC +GI +P+
Sbjct: 309 SLIALWCESNGIELPQ 324
Score = 38.5 bits (88), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 3/166 (1%)
Query: 530 LSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSK 589
LS + +V +G I I++ L G+ E+RE A L +LS D I
Sbjct: 414 LSINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQA 473
Query: 590 LVRLLEDPILSSY--CIKIIKALCTSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDV 647
L+ LLE+ I LC + + A +D + +LL+ + + +
Sbjct: 474 LISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAI 533
Query: 648 LLSLCHEHTKYCQLANTESIIQCVVDISVNGNSRGKETAKELIMLL 693
L L +A ES I +V+I G+ R +E A ++ L
Sbjct: 534 LAILSTNQEGKTAIAEAES-IPVLVEIIRTGSPRNRENAAAILWYL 578
Score = 38.5 bits (88), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Query: 549 IIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPI--LSSYCIKI 606
+I L+ GTR ++ A + NL + L RLL+D + + I
Sbjct: 474 LISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAI 533
Query: 607 IKALCTS-EARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYCQLANTE 665
+ L T+ E + A+AE+ I + +++ TG+ +E+ +L LC + + +A
Sbjct: 534 LAILSTNQEGKTAIAEAE-SIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREV 592
Query: 666 SIIQCVVDISVNGNSRGKETAKELIMLLDHCK 697
+ +++ NG R K A L+ L+ +
Sbjct: 593 GADVALKELTENGTDRAKRKAASLLELIQQTE 624
Score = 32.7 bits (73), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 519 IMEEALEIIEVLSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGD 575
+++EAL I+ +LS Q + + + IP +++ + TG+ +RE A IL L G+
Sbjct: 526 MVDEALAILAILSTNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGN 582
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 46/290 (15%)
Query: 64 KSKLLIQYCSESSKLYLAITADRIQMKFERVRNTLELCLSQIQNIVPSLLAAKVSDIIHD 123
+SK+L+ YC++SSKL+L + I F + L +S + +++P DI
Sbjct: 116 RSKILVDYCAQSSKLWLLLQNPSISGYF----HDLNQEISTLLDVLPVNDLGLSDDIREQ 171
Query: 124 I-------RNAKFPLEPSEDEAGKVLLALLHRGISASSFINQLELEALQLAALRLNITSP 176
I R A+ ++ +++ + + L G + ++L
Sbjct: 172 IELLQRQSRKARLYIDKNDESLRESFYSFLD-GFENGKIPSSVDLRMF------------ 218
Query: 177 LALLIEKRSIKRLLQKICDTDTTRKKVLKCLLYLLRKYGELICKHKTLSTHAVPKEPCHQ 236
+EK I+ D+ + R ++ ++ G+L ++ C
Sbjct: 219 ---FVEKLGIR-------DSKSCRSEIEFLEEQIVNHDGDLEPTGSVINGFVAITRYCRF 268
Query: 237 SIEAQAKLGNEW--DENP--------VNESG--VLEPPEEFKCSISLRLMYDPVVIASGK 284
+ + G EW + NP E G + P++F C ISL LM DPV+I++G+
Sbjct: 269 LLFGFEEDGMEWWIENNPKKPRKGFVAQEIGDTFITVPKDFVCPISLDLMTDPVIISTGQ 328
Query: 285 TFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKELISQWCLKHGIS 334
T++R I +W GH TCPKT L + + PN A+K LI QWC GIS
Sbjct: 329 TYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALKNLIVQWCTASGIS 378
Score = 37.0 bits (84), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 549 IIKFLDTGTRESRELA---IKILCNLSSGDNIVYHILYLDCTSKLVRLL--EDPILSSYC 603
+IK+L G++ ++ +A I++L +G +I L RLL E+ I
Sbjct: 411 LIKYLADGSQAAQTVAAREIRLLAK--TGKENRAYIAEAGAIPHLCRLLTSENAIAQENS 468
Query: 604 IKIIKALCTSEA-RAAVAESNPCIDSIAKLLETG-TREEQEHIVDVLLSLCHEHTKYCQL 661
+ + L E ++ + E C++SI +L +G T E QE+ L SL H ++
Sbjct: 469 VTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRI 528
Query: 662 ANTESIIQCVVDISVNGNSRGKETA 686
A + ++ + + NG RGK+ A
Sbjct: 529 AIVDQCVEALALLLQNGTPRGKKDA 553
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P+EF C ISL LM DPVV ++G+T++R I +W GH+TCP + L + + PN A++
Sbjct: 298 PKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALR 357
Query: 322 ELISQWCLKHGISIPEPHS 340
LISQWC +G+ P S
Sbjct: 358 SLISQWCGVYGLQYDSPES 376
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 69/120 (57%), Gaps = 8/120 (6%)
Query: 248 WDENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHM 307
W E+ ES + PPE F+C IS+ LM DPV+I++G T++RV I+ W N+G+ TCP T+
Sbjct: 20 WPESE-PESEITIPPE-FQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNT 77
Query: 308 RLDNVSVTPNVAIKELISQWCLKHGIS----IPEPHSQPMPALLS--SRKTSSSSSVASF 361
L PN I+++I WC++ G IP P MP + SRK SS++ +
Sbjct: 78 VLTTFDQIPNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDY 137
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 129/301 (42%), Gaps = 75/301 (24%)
Query: 58 FHVAVDKSKLLIQYCSESSKLYLAITADRIQMKFERVRNTLELCLSQIQNIVPSLLAAKV 117
+ + + K LI CS SKL+L + D + F + L LS + +I+P
Sbjct: 96 MQIVMQRIKSLIDDCSRVSKLWLLLQIDIVAFNF----HELVTDLSTVLDILP------- 144
Query: 118 SDIIHDIRNAKFPLEPSEDEAGKVLLALLHRGISAS-SFINQLELEALQLAALRLNITSP 176
+HD + S+D + L++LL + S S F++ ++ ALR +T
Sbjct: 145 ---LHD-------FDLSDD--AQDLISLLTKQCSDSVQFVDARDV------ALRRKVTDT 186
Query: 177 LALLIEKRS------------------------IKRLLQKICDTDTTRKKVLKCLLYLLR 212
+A + + S I+RL +I D R K L L
Sbjct: 187 IAGIKHQISPDHSTLIKIFNDLGLSDSASLTDEIQRLEDEIQDQIDDRSKSAAASLIGLV 246
Query: 213 KYGELICKHKTLSTHAVPKEPCHQSIEAQAKLGNEWDENPVNESGVLEPPEEFKCSISLR 272
+Y + C ST A P HQS+ D N P +F+C I+L
Sbjct: 247 RYSK--CVLYGPSTPA-PDFRRHQSLS---------DANI---------PADFRCPITLE 285
Query: 273 LMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKELISQWCLKHG 332
LM DPVV+A+G+T++R I W +GH TCPKT L + S+ PN A+K LI WC
Sbjct: 286 LMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALKNLIVLWCRDQK 345
Query: 333 I 333
I
Sbjct: 346 I 346
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 52/76 (68%)
Query: 264 EFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKEL 323
+F C +SL +M DPV+++SG+T+E+ +I++W + G CPKT L + ++ PN +K L
Sbjct: 233 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKAL 292
Query: 324 ISQWCLKHGISIPEPH 339
I+ WC + + +P+P+
Sbjct: 293 IANWCETNDVKLPDPN 308
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 5/163 (3%)
Query: 543 SGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPI--LS 600
SG I ++ L GT ++ A L NLS I+ L+ L+ DP +
Sbjct: 664 SGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM-DPAAGMV 722
Query: 601 SYCIKIIKALCT-SEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTKYC 659
+ ++ L T E R A+ + I + +++E G+ +E+ LL L ++C
Sbjct: 723 DKAVAVLANLATIPEGRNAIGQEG-GIPLLVEVVELGSARGKENAAAALLQLSTNSGRFC 781
Query: 660 QLANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKEDNAS 702
+ E + +V +S +G R +E A+ L+ + + NA
Sbjct: 782 NMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRNQRHGNAG 824
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 255 ESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSV 314
+S +E P+EFKC++S +M DPV+I SG+T+E+ +I +W N TCP L V +
Sbjct: 68 DSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN-HDLTCPTAKQVLYRVCL 126
Query: 315 TPNVAIKELISQWCLKHGISIPEPHSQPMPAL----------LSSRKTSSSSSVASFGSS 364
TPN I ELI++WCL + P P + + L R +S SSSVA +
Sbjct: 127 TPNHLINELITRWCLANKYDRPAPKPSDIDYVTELFTDGIESLLQRISSPSSSVADQTEA 186
Query: 365 MDDLCLH 371
+L L
Sbjct: 187 AKELALQ 193
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P +F+C IS LM DPV+IASG T++R I+KWF +G+ TCP T+ L ++ PN I+
Sbjct: 34 PSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTIR 93
Query: 322 ELISQWC---LKHGIS-IPEPH 339
+I WC L GI IP P
Sbjct: 94 RMIQGWCGSSLGGGIERIPTPR 115
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 11/99 (11%)
Query: 257 GVLEP-------PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRL 309
G LEP P F+C ISL LM DPV I++G+T++R I W G+TTCP T + L
Sbjct: 3 GNLEPLDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVAL 62
Query: 310 DNVSVTPNVAIKELISQWCL---KHGIS-IPEPHSQPMP 344
+ ++ PN ++ LI +WC+ +G+ IP P P
Sbjct: 63 SDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADP 101
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 70/118 (59%), Gaps = 9/118 (7%)
Query: 250 ENPVNESGV--LEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHM 307
E+ + ES + +E P+EF C++S +M +PV+IASG+T+E+ +I +W TCPKT
Sbjct: 59 ESKIPESDISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQ 117
Query: 308 RLDNVSVTPNVAIKELISQWCLKHGISIPEPHSQPMPALLSS------RKTSSSSSVA 359
L + PN I +LI+QWCL + +P + + L +S ++ SSSSSVA
Sbjct: 118 VLSHRLWIPNHLISDLITQWCLVNKYDHQKPSDELVAELFTSDIEALLQRVSSSSSVA 175
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 41/66 (62%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P F C ISL M DPV + +G+T+ER+ I KWFN GH TCP T L + +VTPN +
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLH 124
Query: 322 ELISQW 327
LI W
Sbjct: 125 HLIYTW 130
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 257 GVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTP 316
G+ PP F+C +S LM DPV++ASG+TF+R I+KW + G CP+T L + + P
Sbjct: 235 GISIPPY-FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIP 293
Query: 317 NVAIKELISQW 327
N +K +I+ W
Sbjct: 294 NYTVKAMIASW 304
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 11/155 (7%)
Query: 542 ASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDPILSS 601
++ I +++ L GT ++ A L NLS + I+ LV LL DP L
Sbjct: 595 SNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL-DPDLE- 652
Query: 602 YCIKIIKALCTSEARAAVAESNPCI---DSIAKLLET---GTREEQEHIVDVLLSLCHEH 655
+ KA+ +AV E I I L+ET G++ +E+ VLL LC
Sbjct: 653 ---MVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNS 709
Query: 656 TKYCQLANTESIIQCVVDISVNGNSRGKETAKELI 690
K+C L E I +V +S +G R KE A++L+
Sbjct: 710 PKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLL 744
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 6/132 (4%)
Query: 250 ENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRL 309
+NP ++ +E P+EF C++S ++M +P++IASG+TFE+ +I +W TCP+T L
Sbjct: 54 KNPESDISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLK-HERTCPRTKQVL 112
Query: 310 DNVSVTPNVAIKELISQWCLKHGISIPEPHSQPMPALLSS-----RKTSSSSSVASFGSS 364
+ + PN I E+I +WCL H P+ + + ++ SS SSV +
Sbjct: 113 YHRFMIPNHLINEVIKEWCLIHNFDRPKTSDEVIDLFTGDLESLLQRISSPSSVEDQTEA 172
Query: 365 MDDLCLHVSNVS 376
+L L S
Sbjct: 173 AKELALKAKRFS 184
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAG-HTTCPKTHMRLDNVSVTPNVAI 320
P F+C ISL LM DPV + +G+T++R I+ W + G +TTCP T L + ++ PN +
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTL 74
Query: 321 KELISQWCL---KHGIS-IPEPHSQPMP----ALLS--SRKTSSSSSVASFGSSMDDL 368
+ LI +WC+ +G+ IP P P ALLS S T + SV S +++ L
Sbjct: 75 RRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRRL 132
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 45/75 (60%)
Query: 253 VNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNV 312
++E + E P F C ISL M DPV + +G+T+ER I KWFN GH TCP T L +
Sbjct: 52 ISELELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDD 111
Query: 313 SVTPNVAIKELISQW 327
VTPN + +LI W
Sbjct: 112 LVTPNKTLHQLIYTW 126
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 242 AKLGNEWDENPVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTT 301
+KL + +E + S EPP+ F C I+ +M DP V A G T+E I +WF GH T
Sbjct: 334 SKLKGKREEEEASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHET 393
Query: 302 CPKTHMRLDNVSVTPNVAIKELISQW 327
P + RL + S+ PN+A++ I +W
Sbjct: 394 SPMINKRLPHTSLVPNLALRSAIQEW 419
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVS-VTPNVAI 320
P +F+C ISL +M DPV++ SG TF+RV IQ+W ++G+ TCP T + L + PN A+
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 321 KELISQWC---LKHGISIP---EPHSQPMPALLSSRKTSSSSSVAS 360
+ LI + LK S P + HS L S S SSS AS
Sbjct: 66 RSLILNFAHVSLKES-SRPRTQQEHSHSQSQALISTLVSQSSSNAS 110
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 263 EEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKE 322
E+ C ISL +M DPVVI +G T++R I KWF +G+ TCP T L + + NV++++
Sbjct: 290 EDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQ 349
Query: 323 LISQWCLKHGISIP------EPHSQPMPALLSSR 350
+I + C +GI + + H +P L+++
Sbjct: 350 VIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAK 383
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/457 (20%), Positives = 183/457 (40%), Gaps = 90/457 (19%)
Query: 263 EEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKE 322
++ +C ISL +M DPVV+ SG T++R I KWF +G+ TCPKT L + + N ++K+
Sbjct: 280 DDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQ 339
Query: 323 LISQWCLKHGISIPEPHSQPMPALLSSRKTSSSSSVASFGSSMDDLCLHVSNVSFSSSDT 382
+I + ++G+ + + + + S + A F +
Sbjct: 340 VIQSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAG------------------ 381
Query: 383 DHDLHPSNGKTDDGLSCASPLK--NANSHRYQSSMIRHGTDLTSLSKLASRPWGSQCDAV 440
G ++ + ++ S Y+S ++ G + + L S Q +A+
Sbjct: 382 ----ELIKGDEEEMVKALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAM 437
Query: 441 ENIKKLLKD-NGQSRHLAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLL--------- 490
I L KD G++R + ++ +++ L D ++++ A L
Sbjct: 438 AGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDG---ARRESRQYAAAALFYLSSLGDYS 494
Query: 491 AILSQSRDEMP-LFHKDEICTFALFLDSEIMEEALEIIEVLSHQQNYASELVASGIIPSI 549
++ + D +P L + C + DS + I +L +Q + ++A+GI+P +
Sbjct: 495 RLIGEISDAIPGLVRIVKSCDYG---DSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVL 551
Query: 550 IKFLDTGTRESRELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDP-----ILSSYCI 604
+ + +S E++ + D + L ++ E P +L +
Sbjct: 552 LDLV-----KSEEISDGVTA---------------DSMAILAKMAEYPDGMISVLRRGGL 591
Query: 605 KI-IKALCTSEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLCHEHTK--YCQL 661
K+ +K L +SE A ++H V +LL+LCH L
Sbjct: 592 KLAVKILGSSEVSPAT---------------------KQHCVALLLNLCHNGGSDVVGSL 630
Query: 662 ANTESIIQCVVDISVNGNSRGKETAKELIMLLDHCKE 698
A SI+ + S NG G + A LI ++ +E
Sbjct: 631 AKNPSIMGSLYTASSNGELGGGKKASALIKMIHEFQE 667
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P FKC ISL +M PV +++G T++RV IQ+W + G+ TCP T L N PN+ +
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLH 71
Query: 322 ELISQW 327
LI W
Sbjct: 72 RLIDHW 77
Score = 36.2 bits (82), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 112/241 (46%), Gaps = 32/241 (13%)
Query: 438 DAVENIKKLLKDNGQSRH-LAFLNSYVKPLIKFLKDAHNLCDAKAQKDGAEVLLAILSQS 496
DA I + +++ ++R LA + +V L+ + D+ N D++ G V ILS
Sbjct: 112 DARSKILRFARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAV--KILSMI 169
Query: 497 RDEMPLFHKDEI----------CTFALFL-----DSEIMEEALEIIEVLSHQQNYASELV 541
R + +F + + C + FL + ++ + ++E ++ + S+L+
Sbjct: 170 RRK--IFDRRRLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIA--VDAESKLI 225
Query: 542 ---ASGIIPSIIKFLDTGTRESR-ELAIKILCNLSSGDNIVYHILYLDCTSKLVRLLEDP 597
G++ IIK + + + S E + +L ++S + ++ +KL LL DP
Sbjct: 226 IAKGEGLVTEIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDP 285
Query: 598 I----LSSYCIKIIKALCT-SEARAAVAESNPCIDSIAKLLETGTREEQEHIVDVLLSLC 652
++ C+K+++A+ + E R+ + + C++++ L + EH V VL S+C
Sbjct: 286 TTSVSVTEKCLKLLEAISSCKEGRSEICD-GVCVETVVNKLMKVSTAATEHAVTVLWSVC 344
Query: 653 H 653
+
Sbjct: 345 Y 345
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 259 LEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAG-HTTCPKTHMRLDNVSVTPN 317
+E P F C ISL +M DPV++++G T++R I+KW AG +CP T + + +TPN
Sbjct: 10 IEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPN 69
Query: 318 VAIKELISQWCL---KHGIS-IPEPH 339
++ LI WC +G+ IP P
Sbjct: 70 HTLRRLIQSWCTLNASYGVERIPTPR 95
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 259 LEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKW-FNAGHTTCPKTHMRLDNVSVTPN 317
+E P F C ISL +M DPV++++G T++R I+KW F+ +CP T + +TPN
Sbjct: 5 IEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPN 64
Query: 318 VAIKELISQWCL---KHGIS-IPEP 338
++ LI WC +GI IP P
Sbjct: 65 HTLRRLIQSWCTLNASYGIERIPTP 89
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P FKC ISL +M PV + +G T++R IQ+W + G+ TCP T L PN+ ++
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQ 72
Query: 322 ELISQWCLKHGISIPEPHSQPMPAL 346
LI+ W SI H+ P L
Sbjct: 73 RLINIW----SDSIGRRHNGDSPVL 93
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 262 PEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIK 321
P F+C ISL +M PV + +G T++R IQ+W + G+ TCP T L N PN ++
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQ 70
Query: 322 ELISQW 327
LI W
Sbjct: 71 RLIEIW 76
>sp|Q0WUF6|PUB41_ARATH U-box domain-containing protein 41 OS=Arabidopsis thaliana GN=PUB41
PE=2 SV=1
Length = 559
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVA 319
E P EF C I+ LM DPVV++SG+TFER+ +Q N G+ R D +V PN+A
Sbjct: 30 ETPPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVIPNLA 89
Query: 320 IKELISQWCLKHGISIPEP 338
+K I WC + + P P
Sbjct: 90 MKSTIFSWCDRQKVDHPRP 108
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 46/210 (21%)
Query: 530 LSHQQNYASELVASGIIPSIIKFLDTGTRESRELAIKILCNLSSGDN------------- 576
LS ++ ++V SG +P +I L +GT E++E L +L+ D
Sbjct: 303 LSLEKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLGAVEP 362
Query: 577 -------------------IVYHI-LYLDCTSKLVRLLEDPILSSYC------IKIIKAL 610
+YH+ L ++LVR P L S +I+ L
Sbjct: 363 LLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRILLVL 422
Query: 611 CT----SEARAAVAESNPCIDSIAKLLETGTREEQ---EHIVDVLLSLCHEHTKYCQLAN 663
C + + A+ + N + KL E G + + E+ V VLL+LC + ++ LA+
Sbjct: 423 CNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFRGLAS 482
Query: 664 TESIIQCVVDISVNGNSRGKETAKELIMLL 693
+ ++++ NGN R KE A ++++ +
Sbjct: 483 EAGAEEVLMEVEENGNERVKEKASKILLAM 512
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 16/111 (14%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTP--N 317
+PP++F C I+ ++ DPV + +G+T+ER IQ+W G+TTCP T L + S+ P N
Sbjct: 510 KPPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPL-SASILPKTN 568
Query: 318 VAIKELISQWCLKH--------GISIPE-----PHSQPMPALLSSRKTSSS 355
+K LI+ W ++ ++ P P ++ +P L + ++T+ S
Sbjct: 569 YVLKRLITSWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDS 619
>sp|Q8GXQ7|PUB56_ARATH U-box domain-containing protein 56 OS=Arabidopsis thaliana GN=PUB56
PE=2 SV=1
Length = 365
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 252 PVNESGVLEPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDN 311
P+ S +EPP+ F C IS +M +P V A G T+E ++W N G P T++RL+N
Sbjct: 285 PLQWSVSIEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLEN 344
Query: 312 VSVTPNVAIKELISQWCLKH 331
++ PN+ ++ I W +H
Sbjct: 345 RNLIPNLVLRSAIKDWLQQH 364
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 16/111 (14%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTP--N 317
+PP++F C I+ ++ DPV + +G+T+ER IQ+W G+TTCP T L + S+ P N
Sbjct: 510 KPPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPL-SASILPKTN 568
Query: 318 VAIKELISQWCLKH--------GISIPE-----PHSQPMPALLSSRKTSSS 355
+K LI+ W ++ ++ P P ++ +P L + ++T+ S
Sbjct: 569 YVLKRLITSWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDS 619
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLD-NVSVTPNV 318
+PP++F C I+ ++ DPV + +G+T+ER IQ+W G+TTCP T L N+ N
Sbjct: 512 KPPKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQALSANILPKTNY 571
Query: 319 AIKELISQW 327
+K LI W
Sbjct: 572 VLKRLIVSW 580
>sp|Q9STT1|PUB39_ARATH U-box domain-containing protein 39 OS=Arabidopsis thaliana GN=PUB39
PE=2 SV=1
Length = 509
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTH--MRLDNVSVTPN 317
E P EF C I+ LM DPVV+ASG+TFER+ +Q N + PK H + D +V PN
Sbjct: 9 ETPTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNL--SFAPKLHDGTQPDLSTVIPN 66
Query: 318 VAIKELISQWCLKHGISIPEP 338
+A+K I WC ++ + P P
Sbjct: 67 LAMKSTILSWCDRNKMEHPRP 87
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVA 319
E P+ F C ISL +M DP + A G T+E I W GH T P T+ +L + + PN+A
Sbjct: 324 EAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLA 383
Query: 320 IKELISQW 327
++ I +W
Sbjct: 384 LRSAIQEW 391
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 224 LSTHAVPKEPCHQSIEAQAKLGNEWDENPVNESGVLEPPEEFKCSISLRLMYDPVVIASG 283
L PK+ ++IE NE DE+P E+FKC IS+ +M DP V A G
Sbjct: 206 LEPEESPKKGRKETIEKSK--SNESDEDPR--------LEDFKCPISMEIMRDPHVAADG 255
Query: 284 KTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVAIKELISQWCLKH 331
T+E +KW +G T PKT+ L+N ++ PN ++ +I W K+
Sbjct: 256 FTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRIIIKDWLEKN 303
>sp|Q9SGT2|PUB58_ARATH Putative U-box domain-containing protein 58 OS=Arabidopsis thaliana
GN=PUB58 PE=2 SV=3
Length = 420
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVA 319
+PP F C I+ +M DP A G T+E I+KW + GH T P T++RL ++++ PN A
Sbjct: 352 QPPSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRA 411
Query: 320 IKELISQ 326
++ I +
Sbjct: 412 LRSAIEE 418
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 260 EPPEEFKCSISLRLMYDPVVIASGKTFERVWIQKWFNAGHTTCPKTHMRLDNVSVTPNVA 319
+PP F C IS +M +P V A G T+E +++W + GH T P T+++L + ++ PN A
Sbjct: 496 QPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHA 555
Query: 320 IKELISQW 327
++ I +W
Sbjct: 556 LRSAIQEW 563
>sp|Q9SFX2|PUB43_ARATH U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43
PE=2 SV=1
Length = 811
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 248 WDENPVNESGVLEPP-----EEFKCSISLRLMYDPVVIASGKTFERVWIQKWF-----NA 297
WD + + S EP E F C ++ ++M++PV + +G+TFER I+KWF N
Sbjct: 7 WDGSQSDNSSQFEPGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENG 66
Query: 298 GHTTCPKTHMRLDNVSVTPNVAIKELISQW 327
+CP T L ++P++A++ I +W
Sbjct: 67 QPLSCPITSKELSITDLSPSIALRNTIEEW 96
>sp|Q9FJP6|PUB38_ARATH U-box domain-containing protein 38 OS=Arabidopsis thaliana GN=PUB38
PE=1 SV=1
Length = 556
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 261 PPEEFKCSISLRLMYDPVVIASGKTFERVWIQ--------KWFNAGHTTCPKTHMRLDNV 312
PP EF C IS +M DPVV++SG+TFERV +Q N + P D
Sbjct: 33 PPVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNFIPKLNDDEESLP------DFS 86
Query: 313 SVTPNVAIKELISQWCLKHGISIPEP 338
++ PN+ +K I WC G+S P+P
Sbjct: 87 NIIPNLNMKSTIDTWCDTVGVSRPQP 112
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 255,717,269
Number of Sequences: 539616
Number of extensions: 10280001
Number of successful extensions: 27947
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 27624
Number of HSP's gapped (non-prelim): 251
length of query: 744
length of database: 191,569,459
effective HSP length: 125
effective length of query: 619
effective length of database: 124,117,459
effective search space: 76828707121
effective search space used: 76828707121
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)