Your job contains 1 sequence.
>004584
MTSRFGSQSSGVTTMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVL
SLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEFVKKGSKN
EQVDAVLLANQLRKRFINQVMTAGQRVVFEYHGNNYIFTVNGAAVEGQEKSNALERGIIT
NETYFVFEASNDSGIKIVNQREGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRV
FPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETE
KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID
GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF
LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDDFL
HALYEIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLE
GPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPLSIIIL
DDIERLLEYVPIGPRFSNIISQTMLVLLKRLPPKGKKLLVIGTTSEVSFLDSVGICDAFS
VTYHVPTLKTDDAKKVLKQLNVFAEEDVDSASEALNDMPIKKLYMLIEMAAQGEQGGAAE
AIYSGREKIKISHFYDCLQDMVRY
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004584
(744 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2135378 - symbol:NSF "N-ethylmaleimide sensiti... 2894 1.6e-301 1
UNIPROTKB|F1P6Z3 - symbol:NSF "Uncharacterized protein" s... 1458 2.3e-149 1
UNIPROTKB|E2RFV4 - symbol:NSF "Uncharacterized protein" s... 1457 3.0e-149 1
UNIPROTKB|F1MZU2 - symbol:NSF "Uncharacterized protein" s... 1446 4.3e-148 1
UNIPROTKB|E1BQU4 - symbol:NSF "Uncharacterized protein" s... 1444 7.1e-148 1
UNIPROTKB|E1C646 - symbol:NSF "Uncharacterized protein" s... 1444 7.1e-148 1
UNIPROTKB|E1C649 - symbol:NSF "Uncharacterized protein" s... 1444 7.1e-148 1
UNIPROTKB|F1LQ81 - symbol:Nsf "Vesicle-fusing ATPase" spe... 1442 1.2e-147 1
UNIPROTKB|P46459 - symbol:NSF "Vesicle-fusing ATPase" spe... 1440 1.9e-147 1
UNIPROTKB|I3L0N3 - symbol:NSF "Vesicle-fusing ATPase" spe... 1439 2.4e-147 1
UNIPROTKB|P18708 - symbol:NSF "Vesicle-fusing ATPase" spe... 1439 2.4e-147 1
MGI|MGI:104560 - symbol:Nsf "N-ethylmaleimide sensitive f... 1439 2.4e-147 1
ZFIN|ZDB-GENE-030616-37 - symbol:nsfa "N-ethylmaleimide-s... 1437 3.9e-147 1
ZFIN|ZDB-GENE-050808-1 - symbol:nsfb "N-ethylmaleimide-se... 1437 3.9e-147 1
RGD|621594 - symbol:Nsf "N-ethylmaleimide-sensitive facto... 1433 1.0e-146 1
UNIPROTKB|F1RRS3 - symbol:NSF "Uncharacterized protein" s... 1428 3.5e-146 1
DICTYBASE|DDB_G0276153 - symbol:nsfA "N-ethylmaleimide-se... 1387 7.8e-142 1
POMBASE|SPAC1834.11c - symbol:sec18 "secretory pathway pr... 1374 1.9e-140 1
UNIPROTKB|B4DFA2 - symbol:NSF "cDNA FLJ59316, highly simi... 1370 4.9e-140 1
FB|FBgn0013998 - symbol:Nsf2 "NEM-sensitive fusion protei... 1341 5.8e-137 1
GENEDB_PFALCIPARUM|PFC0140c - symbol:PFC0140c "N-ethylmal... 1238 1.7e-135 2
UNIPROTKB|O77313 - symbol:PFC0140c "N-ethylmaleimide sens... 1238 1.7e-135 2
FB|FBgn0000346 - symbol:comt "comatose" species:7227 "Dro... 1321 7.7e-135 1
SGD|S000000284 - symbol:SEC18 "ATPase required for vesicu... 1307 2.3e-133 1
UNIPROTKB|G4MRG5 - symbol:MGG_02418 "Vesicular-fusion pro... 1294 5.6e-132 1
WB|WBGene00003818 - symbol:nsf-1 species:6239 "Caenorhabd... 1195 4.2e-130 2
UNIPROTKB|Q94392 - symbol:nsf-1 "Vesicle-fusing ATPase" s... 1195 4.2e-130 2
UNIPROTKB|I3LTE8 - symbol:I3LTE8 "Uncharacterized protein... 1215 1.3e-123 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 485 7.0e-44 2
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 478 7.4e-44 2
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 470 4.2e-42 1
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 470 4.2e-42 1
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 466 8.2e-42 2
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 462 9.8e-42 2
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 462 1.3e-41 2
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 458 1.5e-41 2
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 458 1.5e-41 2
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 464 1.9e-41 2
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 464 1.9e-41 2
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 464 1.9e-41 2
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 464 1.9e-41 2
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 464 1.9e-41 2
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 464 1.9e-41 2
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 464 2.3e-41 2
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 463 2.7e-41 1
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 462 3.3e-41 2
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 461 4.8e-41 1
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 451 1.2e-40 2
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 457 1.4e-40 2
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 448 1.8e-40 2
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 448 1.2e-39 2
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 441 2.1e-39 2
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 440 2.8e-39 2
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 437 2.5e-38 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 415 3.2e-38 1
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 434 6.0e-38 2
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 434 6.0e-38 2
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 417 1.2e-37 2
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 426 1.0e-36 2
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein... 413 2.6e-36 2
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 418 3.2e-36 1
UNIPROTKB|F1NLN4 - symbol:SPATA5 "Uncharacterized protein... 401 4.8e-36 2
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 375 4.9e-36 2
FB|FBgn0016983 - symbol:smid "smallminded" species:7227 "... 416 9.6e-36 1
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 418 1.3e-35 2
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 418 1.3e-35 2
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 412 2.3e-35 1
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 412 2.4e-35 2
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 410 2.6e-35 1
RGD|1310478 - symbol:Spata5 "spermatogenesis associated 5... 416 2.8e-35 2
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 410 2.9e-35 1
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 409 3.0e-35 2
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 392 6.5e-35 1
WB|WBGene00010562 - symbol:cdc-48.3 species:6239 "Caenorh... 402 1.6e-34 1
WB|WBGene00008682 - symbol:lex-1 species:6239 "Caenorhabd... 404 3.9e-34 1
UNIPROTKB|P54816 - symbol:lex-1 "Tat-binding homolog 7" s... 404 3.9e-34 1
SGD|S000003502 - symbol:YTA7 "Protein that localizes to c... 406 6.2e-34 2
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ... 395 9.4e-34 2
CGD|CAL0002985 - symbol:orf19.3949 species:5476 "Candida ... 411 1.2e-33 2
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 372 1.7e-33 1
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 371 2.1e-33 1
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 371 2.1e-33 1
UNIPROTKB|E1BPU3 - symbol:PEX1 "Uncharacterized protein" ... 397 2.3e-33 1
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 395 3.5e-33 1
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 395 3.5e-33 1
DICTYBASE|DDB_G0282241 - symbol:DDB_G0282241 species:4468... 391 4.1e-33 1
UNIPROTKB|E2RLT2 - symbol:PEX1 "Uncharacterized protein" ... 394 4.8e-33 1
RGD|1559939 - symbol:Pex1 "peroxisomal biogenesis factor ... 394 4.9e-33 1
MGI|MGI:1918632 - symbol:Pex1 "peroxisomal biogenesis fac... 394 4.9e-33 1
SGD|S000001680 - symbol:PEX1 "AAA-peroxin" species:4932 "... 391 7.1e-33 1
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 366 7.5e-33 1
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 366 7.5e-33 1
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator... 365 9.6e-33 1
GENEDB_PFALCIPARUM|MAL8P1.92 - symbol:MAL8P1.92 "ATPase, ... 390 1.2e-32 1
DICTYBASE|DDB_G0284517 - symbol:psmC6 "26S protease regul... 364 1.2e-32 1
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 364 1.2e-32 1
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 364 1.2e-32 1
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 364 1.2e-32 1
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 364 1.2e-32 1
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 364 1.2e-32 1
WARNING: Descriptions of 606 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2135378 [details] [associations]
symbol:NSF "N-ethylmaleimide sensitive factor"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005773
"vacuole" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0009506 GO:GO:0005524
GO:GO:0005794 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016192 GO:GO:0046872 EMBL:AL161502 GO:GO:0015031
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
EMBL:AF128393 KO:K06027 EMBL:AY102111 IPI:IPI00527613 PIR:G85061
RefSeq:NP_192400.2 UniGene:At.33942 UniGene:At.67369
ProteinModelPortal:Q9M0Y8 SMR:Q9M0Y8 IntAct:Q9M0Y8 STRING:Q9M0Y8
PaxDb:Q9M0Y8 PRIDE:Q9M0Y8 EnsemblPlants:AT4G04910.1 GeneID:825830
KEGG:ath:AT4G04910 GeneFarm:2444 TAIR:At4g04910
HOGENOM:HOG000198544 InParanoid:Q9M0Y8 OMA:MTSGQRV PhylomeDB:Q9M0Y8
ProtClustDB:CLSN2690750 Genevestigator:Q9M0Y8 GermOnline:AT4G04910
Uniprot:Q9M0Y8
Length = 742
Score = 2894 (1023.8 bits), Expect = 1.6e-301, P = 1.6e-301
Identities = 564/744 (75%), Positives = 635/744 (85%)
Query: 1 MTSRFGSQSSGVTTMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVL 60
M R+GSQ V TM V NTPSADLA TNLAYCS +DL F VP S+LFLA+VA DSF+L
Sbjct: 1 MAGRYGSQ---VMTMTVTNTPSADLAFTNLAYCSSSDLRQFSVPGSDLFLANVA-DSFIL 56
Query: 61 SLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEFVKKGSKN 120
SL H S+ G IALN++QRRHA+VSTGD VS++RF+PPE+F+LA+LT+ELEFVKKG+K+
Sbjct: 57 SLCGHGSIRDGNIALNAIQRRHARVSTGDMVSVSRFVPPENFDLAMLTLELEFVKKGTKS 116
Query: 121 EQVDAVLLANQLRKRFINQVMTAGQRVVFEYHGNNYIFTVNGAAVEGQEKSNALERGIIT 180
EQVDA LL+ QL++++ NQV+T GQ+ FEYHG NYI TVN A VEGQ+ +N +ERG+++
Sbjct: 117 EQVDAALLSTQLKRKYTNQVLTVGQKATFEYHGTNYILTVNRADVEGQDHTNGIERGLLS 176
Query: 181 NETYFVFEASNDSGIKIVNQREGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRV 240
+TY VFEASN SGIKIVNQRE A+SNIF+HKEFNL+SLGIGGL AEFADIFRRAFASRV
Sbjct: 177 KDTYIVFEASNASGIKIVNQREAASSNIFKHKEFNLESLGIGGLGAEFADIFRRAFASRV 236
Query: 241 FPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETE 300
FPPHVTS+LGIKHVKGMLL+GPPGTGKTLMARQIGKMLNG +PKIVNGPEVLSKFVGETE
Sbjct: 237 FPPHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETE 296
Query: 301 KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
KN+RDLFADAE DQRT GD S+LHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID
Sbjct: 297 KNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 356
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
GVE+LNNVLLIGMTNRKD+LDEALLRPGRLEVQVEISLPDE GRLQILQIHTNKMKENSF
Sbjct: 357 GVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSF 416
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDDFL 480
L D+NLQELAARTKNYSGAELEGV KSA S+ALNRQLSMDDLTKPV+EE+IK+TM+DFL
Sbjct: 417 LGTDINLQELAARTKNYSGAELEGVVKSATSYALNRQLSMDDLTKPVEEENIKITMEDFL 476
Query: 481 HALYEIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLE 540
HA+YE+ PAFGASTDDLER RLNGMVDCG RH HIY+RAMLLVEQVKVS SPLVTCLLE
Sbjct: 477 HAIYEVQPAFGASTDDLERCRLNGMVDCGHRHNHIYKRAMLLVEQVKVSTRSPLVTCLLE 536
Query: 541 GPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXXXXXX 600
GPSGSGKTALAAT GIDSDFP+VKI+SAE+MIGL ESTKCA IVKVFEDAYKSP
Sbjct: 537 GPSGSGKTALAATIGIDSDFPYVKIVSAETMIGLSESTKCAHIVKVFEDAYKSPMSIIIL 596
Query: 601 XXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGICDAFS 660
++ IGPRFSNIISQT+ GTTSEV+FL+SVGI D FS
Sbjct: 597 DDIERLLEFIAIGPRFSNIISQTLMVLLKRLPPKGKKLLVFGTTSEVTFLESVGISDCFS 656
Query: 661 VTYHVPTLKTDDAKKVLKQLNVFAEEDVDSASEALNDMPIKKLYMLIEMXXXXXXXXXXX 720
VT+ VPTL+ +DAKKVL QLN+F+E+DVDSA+EALNDMPIKK+YMLIEM
Sbjct: 657 VTHSVPTLQKEDAKKVLNQLNLFSEDDVDSAAEALNDMPIKKIYMLIEMAAQGENGGSAE 716
Query: 721 XIYSGREKIKISHFYDCLQDMVRY 744
IY+GREKI I+HFYDCL D +R+
Sbjct: 717 AIYAGREKININHFYDCLGDFIRF 740
>UNIPROTKB|F1P6Z3 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IEA] [GO:0019905
"syntaxin binding" evidence=IEA] [GO:0006813 "potassium ion
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001921
"positive regulation of receptor recycling" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006813 GO:GO:0001921
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00530000064085 EMBL:AAEX03006344
Ensembl:ENSCAFT00000021409 Uniprot:F1P6Z3
Length = 745
Score = 1458 (518.3 bits), Expect = 2.3e-149, P = 2.3e-149
Identities = 318/719 (44%), Positives = 450/719 (62%)
Query: 13 TTMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQ 72
+TM P+ +L+LTN A + D F+ P ++ + + + +L +HPSV G
Sbjct: 5 STMQAARCPTDELSLTNCAVVNEKD---FQ-PGQHVIVRTSPNHRYTFTLRTHPSVVPGS 60
Query: 73 IALNSVQRRHAKVSTGDH--VSLNRFIPPEDFNLALLTVELEFVKKGS-KNEQVDAVLLA 129
IA + QR+ A +S G VSL F + + +T+E++F++K S + D +A
Sbjct: 61 IAFSLPQRKWAGLSIGQEIEVSLYTFDKAKQC-IGTMTIEIDFLQKKSIDSNPYDTDKMA 119
Query: 130 NQLRKRFINQVMTAGQRVVFEYHGNNY------IFTVNGAAVEGQE---KSNALERGIIT 180
+ ++F NQ + GQ++VF ++ + I ++ + ++G+ K +E G++
Sbjct: 120 AEFIQQFNNQAFSVGQQLVFSFNEKLFGLLVKDIEAMDPSILKGEPATGKRQKIEVGLVV 179
Query: 181 NETYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASR 239
+ FE + +S + ++ + + N + ++N + +GIGGL EF+DIFRRAFASR
Sbjct: 180 GNSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASR 239
Query: 240 VFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGET 299
VFPP + ++G KHVKG+LLYGPPG GKTL+ARQIGKMLN EPK+VNGPE+L+K+VGE+
Sbjct: 240 VFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGES 299
Query: 300 EKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKI 359
E NIR LFADAE +QR G S LH+IIFDEIDAICK RGS TGVHD++VNQLL+KI
Sbjct: 300 EANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKI 359
Query: 360 DGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENS 419
DGVE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GRLQIL IHT +M+ +
Sbjct: 360 DGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQ 419
Query: 420 FLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD---EESIKVTM 476
L+ DV+++ELA TKN+SGAELEG+ ++A S A+NR + + VD ES++VT
Sbjct: 420 LLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVE-VDMEKAESLQVTR 478
Query: 477 DDFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLV 535
DFL +L +I PAFG + +D +NG++ GD + + LLV+Q K S +PLV
Sbjct: 479 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLEDGELLVQQTKNSDRTPLV 538
Query: 536 TCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPX 595
+ LLEGP SGKTALAA +S+FPF+KI S + MIG E+ KC + K+F+DAYKS
Sbjct: 539 SVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQL 598
Query: 596 XXXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGI 655
YVPIGPRFSN++ Q + IGTTS L + +
Sbjct: 599 SCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEM 658
Query: 656 CDAFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
+AFS T HVP + T + + L+ L F +++ + S+ + + IKKL MLIEM
Sbjct: 659 LNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTISQQVKGKKVWIGIKKLLMLIEM 717
>UNIPROTKB|E2RFV4 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:AAEX03006344 Ensembl:ENSCAFT00000021411
Uniprot:E2RFV4
Length = 811
Score = 1457 (517.9 bits), Expect = 3.0e-149, P = 3.0e-149
Identities = 318/718 (44%), Positives = 449/718 (62%)
Query: 14 TMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQI 73
TM P+ +L+LTN A + D F+ P ++ + + + +L +HPSV G I
Sbjct: 64 TMQAARCPTDELSLTNCAVVNEKD---FQ-PGQHVIVRTSPNHRYTFTLRTHPSVVPGSI 119
Query: 74 ALNSVQRRHAKVSTGDH--VSLNRFIPPEDFNLALLTVELEFVKKGS-KNEQVDAVLLAN 130
A + QR+ A +S G VSL F + + +T+E++F++K S + D +A
Sbjct: 120 AFSLPQRKWAGLSIGQEIEVSLYTFDKAKQC-IGTMTIEIDFLQKKSIDSNPYDTDKMAA 178
Query: 131 QLRKRFINQVMTAGQRVVFEYHGNNY------IFTVNGAAVEGQE---KSNALERGIITN 181
+ ++F NQ + GQ++VF ++ + I ++ + ++G+ K +E G++
Sbjct: 179 EFIQQFNNQAFSVGQQLVFSFNEKLFGLLVKDIEAMDPSILKGEPATGKRQKIEVGLVVG 238
Query: 182 ETYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRV 240
+ FE + +S + ++ + + N + ++N + +GIGGL EF+DIFRRAFASRV
Sbjct: 239 NSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRV 298
Query: 241 FPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETE 300
FPP + ++G KHVKG+LLYGPPG GKTL+ARQIGKMLN EPK+VNGPE+L+K+VGE+E
Sbjct: 299 FPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESE 358
Query: 301 KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
NIR LFADAE +QR G S LH+IIFDEIDAICK RGS TGVHD++VNQLL+KID
Sbjct: 359 ANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKID 418
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
GVE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GRLQIL IHT +M+ +
Sbjct: 419 GVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQL 478
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD---EESIKVTMD 477
L+ DV+++ELA TKN+SGAELEG+ ++A S A+NR + + VD ES++VT
Sbjct: 479 LSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVE-VDMEKAESLQVTRG 537
Query: 478 DFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVT 536
DFL +L +I PAFG + +D +NG++ GD + + LLV+Q K S +PLV+
Sbjct: 538 DFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLEDGELLVQQTKNSDRTPLVS 597
Query: 537 CLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXX 596
LLEGP SGKTALAA +S+FPF+KI S + MIG E+ KC + K+F+DAYKS
Sbjct: 598 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 657
Query: 597 XXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGIC 656
YVPIGPRFSN++ Q + IGTTS L + +
Sbjct: 658 CVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML 717
Query: 657 DAFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
+AFS T HVP + T + + L+ L F +++ + S+ + + IKKL MLIEM
Sbjct: 718 NAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTISQQVKGKKVWIGIKKLLMLIEM 775
>UNIPROTKB|F1MZU2 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=IEA] [GO:0019905 "syntaxin binding"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001921 "positive regulation of receptor
recycling" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:DAAA02049275 EMBL:DAAA02049276 IPI:IPI00721227
Ensembl:ENSBTAT00000011107 Uniprot:F1MZU2
Length = 746
Score = 1446 (514.1 bits), Expect = 4.3e-148, P = 4.3e-148
Identities = 315/718 (43%), Positives = 447/718 (62%)
Query: 14 TMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQI 73
+M P+ +L+LTN A + D + ++ + + + +L +HPSV G I
Sbjct: 5 SMQAARCPTDELSLTNCAVVNEKDFQS----GQHVIVRTSPNHRYTFTLRTHPSVVPGSI 60
Query: 74 ALNSVQRRHAKVSTGDH--VSLNRFIPPEDFNLALLTVELEFVKKGS-KNEQVDAVLLAN 130
A + QR+ A +S G VSL F + + +T+E++F++K S + D +A
Sbjct: 61 AFSLPQRKWAGLSIGQEIEVSLYTFDKAKQC-IGTMTIEIDFLQKKSIDSNPYDTDKMAA 119
Query: 131 QLRKRFINQVMTAGQRVVFEYHGNNY------IFTVNGAAVEGQE---KSNALERGIITN 181
+ ++F NQ + GQ++VF ++ + I ++ + ++G+ K +E G++
Sbjct: 120 EFIQQFNNQAFSVGQQLVFSFNEKLFGLLVKDIEAMDPSILKGEPATGKRQKIEIGLVVG 179
Query: 182 ETYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRV 240
+ FE + +S + ++ + + N + ++N + +GIGGL EF+DIFRRAFASRV
Sbjct: 180 NSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRV 239
Query: 241 FPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETE 300
FPP + ++G KHVKG+LLYGPPG GKTL+ARQIGKMLN EPK+VNGPE+L+K+VGE+E
Sbjct: 240 FPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESE 299
Query: 301 KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
NIR LFADAE +QR G S LH+IIFDEIDAICK RGS TGVHD++VNQLL+KID
Sbjct: 300 ANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKID 359
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
GVE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GRLQIL IHT +M+ +
Sbjct: 360 GVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQL 419
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD---EESIKVTMD 477
L+ DV+++ELA TKN+SGAELEG+ ++A S A+NR + + VD ES++VT
Sbjct: 420 LSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVE-VDMEKAESLQVTRG 478
Query: 478 DFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVT 536
DFL +L +I PAFG + +D +NG++ GD + + LLV+Q K S +PLV+
Sbjct: 479 DFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLEDGELLVQQTKNSDRTPLVS 538
Query: 537 CLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXX 596
LLEGP SGKTALAA +S+FPF+KI S + MIG E+ KC + K+F+DAYKS
Sbjct: 539 VLLEGPPHSGKTALAARIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598
Query: 597 XXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGIC 656
YVPIGPRFSN++ Q + IGTTS L + +
Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML 658
Query: 657 DAFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
+AFS T HVP + T + + L+ L F +E+ + ++ + + IKKL MLIEM
Sbjct: 659 NAFSTTIHVPNIATGEQLLEALELLGNFKDEERTTITQQVKGKKVWIGIKKLLMLIEM 716
>UNIPROTKB|E1BQU4 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00589241
Ensembl:ENSGALT00000001581 ArrayExpress:E1BQU4 Uniprot:E1BQU4
Length = 745
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 312/718 (43%), Positives = 444/718 (61%)
Query: 15 MNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIA 74
M P+ +L+LTN A + D + ++ + + ++ +L +HPSV G IA
Sbjct: 6 MQAARCPTDELSLTNCAVVNDTDFPS----GQHVVVKTSPNHKYIFTLRTHPSVVPGNIA 61
Query: 75 LNSVQRRHAKVSTGDHVSLNRFIPPEDFN-LALLTVELEFV-KKGSKNEQVDAVLLANQL 132
+ QR+ A +S G + ++ + + +A +T+E++F+ KK + D +A +
Sbjct: 62 FSLPQRKWAGLSIGQEIDVSLYTFDKSKQCIATMTIEIDFLQKKNIDSNPYDTDKMAAEF 121
Query: 133 RKRFINQVMTAGQRVVFEYHGNNYIFTVNGAAVEGQE-----------KSNALERGIITN 181
++F +Q + GQ++VF + N+ +F + ++EG + K +E G++
Sbjct: 122 IQQFNSQAFSVGQQLVFSF--NDKLFGLLVKSMEGMDPSILKGESGASKKQKIEVGLVFG 179
Query: 182 ETYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRV 240
+ FE + +S + ++ + + N + ++N + +GIGGL EF+DIFRRAFASRV
Sbjct: 180 NSQVAFEKAENSSLNLIGKSKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRV 239
Query: 241 FPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETE 300
FPP + ++G KHVKG+LLYGPPG GKTLMARQIGKMLN EPK+VNGPE+L+K+VGE+E
Sbjct: 240 FPPEIVEQMGCKHVKGILLYGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNKYVGESE 299
Query: 301 KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
NIR LFADAE +QR G S +H+IIFDEIDAICK RGS TGVHD++VNQLL+KID
Sbjct: 300 ANIRKLFADAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKID 359
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
GVE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GR QIL IHT +M+E+
Sbjct: 360 GVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTVRMREHQL 419
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD---EESIKVTMD 477
LA DV++ ELA TKN+SGAELEG+ ++A S A+NR + + VD ES++VT
Sbjct: 420 LAEDVDIAELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVE-VDMEKAESLRVTRG 478
Query: 478 DFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVT 536
DF +L +I PAFG + +D +NG++ GD + LLV+Q K S +PLV+
Sbjct: 479 DFFASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVS 538
Query: 537 CLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXX 596
LLEGP SGKTALAA +S+FPF+KI S + MIG E+ KC + K+F+DAYKS
Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598
Query: 597 XXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGIC 656
YVPIGPRFSN++ Q + IGTTS L + +
Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML 658
Query: 657 DAFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
+AFS T HVP + T + + L+ L F +++ + ++ + + IKKL MLIEM
Sbjct: 659 NAFSTTIHVPNIATGEQLMEALELLGNFKDKERSTIAQNVKGKSVWIGIKKLLMLIEM 716
>UNIPROTKB|E1C646 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00821151
Ensembl:ENSGALT00000040844 ArrayExpress:E1C646 Uniprot:E1C646
Length = 744
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 312/718 (43%), Positives = 444/718 (61%)
Query: 15 MNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIA 74
M P+ +L+LTN A + D + ++ + + ++ +L +HPSV G IA
Sbjct: 6 MQAARCPTDELSLTNCAVVNDTDFPS----GQHVVVKTSPNHKYIFTLRTHPSVVPGNIA 61
Query: 75 LNSVQRRHAKVSTGDHVSLNRFIPPEDFN-LALLTVELEFV-KKGSKNEQVDAVLLANQL 132
+ QR+ A +S G + ++ + + +A +T+E++F+ KK + D +A +
Sbjct: 62 FSLPQRKWAGLSIGQEIDVSLYTFDKSKQCIATMTIEIDFLQKKNIDSNPYDTDKMAAEF 121
Query: 133 RKRFINQVMTAGQRVVFEYHGNNYIFTVNGAAVEGQE-----------KSNALERGIITN 181
++F +Q + GQ++VF + N+ +F + ++EG + K +E G++
Sbjct: 122 IQQFNSQAFSVGQQLVFSF--NDKLFGLLVKSMEGMDPSILKGESGASKKQKIEVGLVFG 179
Query: 182 ETYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRV 240
+ FE + +S + ++ + + N + ++N + +GIGGL EF+DIFRRAFASRV
Sbjct: 180 NSQVAFEKAENSSLNLIGKSKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRV 239
Query: 241 FPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETE 300
FPP + ++G KHVKG+LLYGPPG GKTLMARQIGKMLN EPK+VNGPE+L+K+VGE+E
Sbjct: 240 FPPEIVEQMGCKHVKGILLYGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNKYVGESE 299
Query: 301 KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
NIR LFADAE +QR G S +H+IIFDEIDAICK RGS TGVHD++VNQLL+KID
Sbjct: 300 ANIRKLFADAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKID 359
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
GVE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GR QIL IHT +M+E+
Sbjct: 360 GVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTVRMREHQL 419
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD---EESIKVTMD 477
LA DV++ ELA TKN+SGAELEG+ ++A S A+NR + + VD ES++VT
Sbjct: 420 LAEDVDIAELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVE-VDMEKAESLRVTRG 478
Query: 478 DFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVT 536
DF +L +I PAFG + +D +NG++ GD + LLV+Q K S +PLV+
Sbjct: 479 DFFASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVS 538
Query: 537 CLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXX 596
LLEGP SGKTALAA +S+FPF+KI S + MIG E+ KC + K+F+DAYKS
Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598
Query: 597 XXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGIC 656
YVPIGPRFSN++ Q + IGTTS L + +
Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML 658
Query: 657 DAFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
+AFS T HVP + T + + L+ L F +++ + ++ + + IKKL MLIEM
Sbjct: 659 NAFSTTIHVPNIATGEQLMEALELLGNFKDKERSTIAQNVKGKSVWIGIKKLLMLIEM 716
>UNIPROTKB|E1C649 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0001921
"positive regulation of receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0019905 "syntaxin binding" evidence=IEA] [GO:0030165 "PDZ
domain binding" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00823263
Ensembl:ENSGALT00000040841 ArrayExpress:E1C649 Uniprot:E1C649
Length = 747
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 312/718 (43%), Positives = 444/718 (61%)
Query: 15 MNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIA 74
M P+ +L+LTN A + D + ++ + + ++ +L +HPSV G IA
Sbjct: 6 MQAARCPTDELSLTNCAVVNDTDFPS----GQHVVVKTSPNHKYIFTLRTHPSVVPGNIA 61
Query: 75 LNSVQRRHAKVSTGDHVSLNRFIPPEDFN-LALLTVELEFV-KKGSKNEQVDAVLLANQL 132
+ QR+ A +S G + ++ + + +A +T+E++F+ KK + D +A +
Sbjct: 62 FSLPQRKWAGLSIGQEIDVSLYTFDKSKQCIATMTIEIDFLQKKNIDSNPYDTDKMAAEF 121
Query: 133 RKRFINQVMTAGQRVVFEYHGNNYIFTVNGAAVEGQE-----------KSNALERGIITN 181
++F +Q + GQ++VF + N+ +F + ++EG + K +E G++
Sbjct: 122 IQQFNSQAFSVGQQLVFSF--NDKLFGLLVKSMEGMDPSILKGESGASKKQKIEVGLVFG 179
Query: 182 ETYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRV 240
+ FE + +S + ++ + + N + ++N + +GIGGL EF+DIFRRAFASRV
Sbjct: 180 NSQVAFEKAENSSLNLIGKSKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRV 239
Query: 241 FPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETE 300
FPP + ++G KHVKG+LLYGPPG GKTLMARQIGKMLN EPK+VNGPE+L+K+VGE+E
Sbjct: 240 FPPEIVEQMGCKHVKGILLYGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNKYVGESE 299
Query: 301 KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
NIR LFADAE +QR G S +H+IIFDEIDAICK RGS TGVHD++VNQLL+KID
Sbjct: 300 ANIRKLFADAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKID 359
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
GVE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GR QIL IHT +M+E+
Sbjct: 360 GVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTVRMREHQL 419
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD---EESIKVTMD 477
LA DV++ ELA TKN+SGAELEG+ ++A S A+NR + + VD ES++VT
Sbjct: 420 LAEDVDIAELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVE-VDMEKAESLRVTRG 478
Query: 478 DFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVT 536
DF +L +I PAFG + +D +NG++ GD + LLV+Q K S +PLV+
Sbjct: 479 DFFASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVS 538
Query: 537 CLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXX 596
LLEGP SGKTALAA +S+FPF+KI S + MIG E+ KC + K+F+DAYKS
Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598
Query: 597 XXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGIC 656
YVPIGPRFSN++ Q + IGTTS L + +
Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML 658
Query: 657 DAFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
+AFS T HVP + T + + L+ L F +++ + ++ + + IKKL MLIEM
Sbjct: 659 NAFSTTIHVPNIATGEQLMEALELLGNFKDKERSTIAQNVKGKSVWIGIKKLLMLIEM 716
>UNIPROTKB|F1LQ81 [details] [associations]
symbol:Nsf "Vesicle-fusing ATPase" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:621594 Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
IPI:IPI00210635 PRIDE:F1LQ81 Ensembl:ENSRNOT00000006361
ArrayExpress:F1LQ81 Uniprot:F1LQ81
Length = 744
Score = 1442 (512.7 bits), Expect = 1.2e-147, P = 1.2e-147
Identities = 314/721 (43%), Positives = 447/721 (61%)
Query: 11 GVTTMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNK 70
G TM P+ +L+L+N A + D + ++ + + ++ +L +HPSV
Sbjct: 2 GCRTMQAARCPTDELSLSNCAVVNEKDYQS----GQHVMVRTSPNHKYIFTLRTHPSVVP 57
Query: 71 GQIALNSVQRRHAKVSTGD--HVSLNRFIPPEDFNLALLTVELEFV-KKGSKNEQVDAVL 127
G IA + QR+ A +S G V+L F + + +T+E++F+ KK + D
Sbjct: 58 GCIAFSLPQRKWAGLSIGQDIEVALYSFDKAKQC-IGTMTIEIDFLQKKNIDSNPYDTDK 116
Query: 128 LANQLRKRFINQVMTAGQRVVFEYHGNNY------IFTVNGAAVEGQE---KSNALERGI 178
+A + ++F NQ + GQ++VF ++ + I ++ + ++G+ K +E G+
Sbjct: 117 MAAEFIQQFNNQAFSVGQQLVFSFNDKLFGLLVKDIEAMDPSILKGEPASGKRQKIEVGL 176
Query: 179 ITNETYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFA 237
+ + FE + +S + ++ + + N + ++N + +GIGGL EF+DIFRRAFA
Sbjct: 177 VVGNSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFA 236
Query: 238 SRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVG 297
SRVFPP + ++G KHVKG+LLYGPPG GKTL+ARQIGKMLN EPK+VNGPE+L+K+VG
Sbjct: 237 SRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVG 296
Query: 298 ETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLT 357
E+E NIR LFADAE +QR G S LH+IIFDEIDAICK RGS TGVHD++VNQLL+
Sbjct: 297 ESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLS 356
Query: 358 KIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKE 417
KIDGVE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GRLQIL IHT +M+
Sbjct: 357 KIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRG 416
Query: 418 NSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD---EESIKV 474
+ L+ DV+++ELA TKN+SGAELEG+ ++A S A+NR + + VD ES++V
Sbjct: 417 HQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVE-VDMEKAESLQV 475
Query: 475 TMDDFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSP 533
T DFL +L +I PAFG + +D +NG++ GD + LLV+Q K S +P
Sbjct: 476 TRGDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTP 535
Query: 534 LVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKS 593
LV+ LLEGP SGKTALAA +S+FPF+KI S + MIG E+ KC + K+F+DAYKS
Sbjct: 536 LVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKS 595
Query: 594 PXXXXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSV 653
YVPIGPRFSN++ Q + IGTTS L +
Sbjct: 596 QLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEM 655
Query: 654 GICDAFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIE 708
+ +AFS T HVP + T + + L+ L F +++ + ++ + + IKKL MLIE
Sbjct: 656 EMLNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIE 715
Query: 709 M 709
M
Sbjct: 716 M 716
>UNIPROTKB|P46459 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0019905 "syntaxin binding" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0006887 "exocytosis" evidence=TAS] [GO:0045026 "plasma membrane
fusion" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030165 "PDZ domain binding" evidence=IPI] [GO:0001921
"positive regulation of receptor recycling" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_13685 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0032403 GO:GO:0046872 GO:GO:0015031
GO:GO:0007268 GO:GO:0043198 GO:GO:0005795 GO:GO:0006813
GO:GO:0006887 eggNOG:COG0464 GO:GO:0001921 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 GO:GO:0017157
GO:GO:0045026 EMBL:AC138645 KO:K06027 OMA:IFTLRTH
HOGENOM:HOG000198544 HOVERGEN:HBG000324 EMBL:U03985 EMBL:AF135168
EMBL:AF102846 EMBL:AK290204 EMBL:AC004098 EMBL:AC138688
EMBL:AC217769 EMBL:AC217778 EMBL:AC217780 EMBL:BC030613
IPI:IPI00006451 PIR:G01234 RefSeq:NP_006169.2 UniGene:Hs.431279
ProteinModelPortal:P46459 SMR:P46459 DIP:DIP-389N IntAct:P46459
MINT:MINT-1369243 STRING:P46459 TCDB:1.F.1.1.1 PhosphoSite:P46459
DMDM:257051048 UCD-2DPAGE:P46459 PaxDb:P46459 PRIDE:P46459
Ensembl:ENST00000398238 GeneID:4905 KEGG:hsa:4905 UCSC:uc002iku.3
CTD:4905 GeneCards:GC17P044668 H-InvDB:HIX0013914
H-InvDB:HIX0013915 HGNC:HGNC:8016 HPA:CAB009324 HPA:CAB013645
HPA:HPA003154 MIM:601633 neXtProt:NX_P46459 PharmGKB:PA31793
InParanoid:P46459 OrthoDB:EOG4DZ1TR PhylomeDB:P46459 ChiTaRS:NSF
GenomeRNAi:4905 NextBio:18875 PMAP-CutDB:P46459 ArrayExpress:P46459
Bgee:P46459 CleanEx:HS_NSF Genevestigator:P46459
GermOnline:ENSG00000073969 Uniprot:P46459
Length = 744
Score = 1440 (512.0 bits), Expect = 1.9e-147, P = 1.9e-147
Identities = 314/718 (43%), Positives = 446/718 (62%)
Query: 14 TMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQI 73
+M P+ +L+LTN A + D + ++ + + + +L +HPSV G I
Sbjct: 5 SMQAARCPTDELSLTNCAVVNEKDFQS----GQHVIVRTSPNHRYTFTLKTHPSVVPGSI 60
Query: 74 ALNSVQRRHAKVSTGDH--VSLNRFIPPEDFNLALLTVELEFVKKGS-KNEQVDAVLLAN 130
A + QR+ A +S G VSL F + + +T+E++F++K S + D +A
Sbjct: 61 AFSLPQRKWAGLSIGQEIEVSLYTFDKAKQC-IGTMTIEIDFLQKKSIDSNPYDTDKMAA 119
Query: 131 QLRKRFINQVMTAGQRVVFEYHGNNY------IFTVNGAAVEGQE---KSNALERGIITN 181
+ ++F NQ + GQ++VF ++ + I ++ + ++G+ K +E G++
Sbjct: 120 EFIQQFNNQAFSVGQQLVFSFNEKLFGLLVKDIEAMDPSILKGEPATGKRQKIEVGLVVG 179
Query: 182 ETYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRV 240
+ FE + +S + ++ + + N + ++N + +GIGGL EF+DIFRRAFASRV
Sbjct: 180 NSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRV 239
Query: 241 FPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETE 300
FPP + ++G KHVKG+LLYGPPG GKTL+ARQIGKMLN EPK+VNGPE+L+K+VGE+E
Sbjct: 240 FPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESE 299
Query: 301 KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
NIR LFADAE +QR G S LH+IIFDEIDAICK RGS TGVHD++VNQLL+KID
Sbjct: 300 ANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKID 359
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
GVE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GRLQIL IHT +M+ +
Sbjct: 360 GVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQL 419
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD---EESIKVTMD 477
L+ DV+++ELA TKN+SGAELEG+ ++A S A+NR + + VD ES++VT
Sbjct: 420 LSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVE-VDMEKAESLQVTRG 478
Query: 478 DFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVT 536
DFL +L +I PAFG + +D +NG++ GD + LLV+Q K S +PLV+
Sbjct: 479 DFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVS 538
Query: 537 CLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXX 596
LLEGP SGKTALAA +S+FPF+KI S + MIG E+ KC + K+F+DAYKS
Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598
Query: 597 XXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGIC 656
YVPIGPRFSN++ Q + IGTTS L + +
Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML 658
Query: 657 DAFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
+AFS T HVP + T + + L+ L F +++ + ++ + + IKKL MLIEM
Sbjct: 659 NAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEM 716
>UNIPROTKB|I3L0N3 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0019905 "syntaxin
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016192
GO:GO:0015031 GO:GO:0043198 GO:GO:0005795 GO:GO:0006813
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GO:GO:0017157 EMBL:AC138645 EMBL:AC217780 HGNC:HGNC:8016
ChiTaRS:NSF ProteinModelPortal:I3L0N3 SMR:I3L0N3 PRIDE:I3L0N3
Ensembl:ENST00000575068 Bgee:I3L0N3 Uniprot:I3L0N3
Length = 739
Score = 1439 (511.6 bits), Expect = 2.4e-147, P = 2.4e-147
Identities = 314/717 (43%), Positives = 445/717 (62%)
Query: 15 MNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIA 74
M P+ +L+LTN A + D + ++ + + + +L +HPSV G IA
Sbjct: 1 MQAARCPTDELSLTNCAVVNEKDFQS----GQHVIVRTSPNHRYTFTLKTHPSVVPGSIA 56
Query: 75 LNSVQRRHAKVSTGDH--VSLNRFIPPEDFNLALLTVELEFVKKGS-KNEQVDAVLLANQ 131
+ QR+ A +S G VSL F + + +T+E++F++K S + D +A +
Sbjct: 57 FSLPQRKWAGLSIGQEIEVSLYTFDKAKQC-IGTMTIEIDFLQKKSIDSNPYDTDKMAAE 115
Query: 132 LRKRFINQVMTAGQRVVFEYHGNNY------IFTVNGAAVEGQE---KSNALERGIITNE 182
++F NQ + GQ++VF ++ + I ++ + ++G+ K +E G++
Sbjct: 116 FIQQFNNQAFSVGQQLVFSFNEKLFGLLVKDIEAMDPSILKGEPATGKRQKIEVGLVVGN 175
Query: 183 TYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVF 241
+ FE + +S + ++ + + N + ++N + +GIGGL EF+DIFRRAFASRVF
Sbjct: 176 SQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVF 235
Query: 242 PPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEK 301
PP + ++G KHVKG+LLYGPPG GKTL+ARQIGKMLN EPK+VNGPE+L+K+VGE+E
Sbjct: 236 PPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEA 295
Query: 302 NIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDG 361
NIR LFADAE +QR G S LH+IIFDEIDAICK RGS TGVHD++VNQLL+KIDG
Sbjct: 296 NIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDG 355
Query: 362 VESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFL 421
VE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GRLQIL IHT +M+ + L
Sbjct: 356 VEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLL 415
Query: 422 APDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD---EESIKVTMDD 478
+ DV+++ELA TKN+SGAELEG+ ++A S A+NR + + VD ES++VT D
Sbjct: 416 SADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVE-VDMEKAESLQVTRGD 474
Query: 479 FLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTC 537
FL +L +I PAFG + +D +NG++ GD + LLV+Q K S +PLV+
Sbjct: 475 FLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSV 534
Query: 538 LLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXXX 597
LLEGP SGKTALAA +S+FPF+KI S + MIG E+ KC + K+F+DAYKS
Sbjct: 535 LLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSC 594
Query: 598 XXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGICD 657
YVPIGPRFSN++ Q + IGTTS L + + +
Sbjct: 595 VVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLN 654
Query: 658 AFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
AFS T HVP + T + + L+ L F +++ + ++ + + IKKL MLIEM
Sbjct: 655 AFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEM 711
>UNIPROTKB|P18708 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:10029
"Cricetulus griseus" [GO:0030496 "midbody" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
GO:GO:0015031 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0030496 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 EMBL:X15652 PIR:S04235 PDB:1D2N
PDB:1NSF PDB:1QCS PDB:1QDN PDBsum:1D2N PDBsum:1NSF PDBsum:1QCS
PDBsum:1QDN ProteinModelPortal:P18708 SMR:P18708 DIP:DIP-35598N
IntAct:P18708 PRIDE:P18708 HOVERGEN:HBG000324
EvolutionaryTrace:P18708 Uniprot:P18708
Length = 744
Score = 1439 (511.6 bits), Expect = 2.4e-147, P = 2.4e-147
Identities = 312/718 (43%), Positives = 446/718 (62%)
Query: 14 TMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQI 73
+M P+ +L+L+N A S D + ++ + + ++ +L +HPSV G +
Sbjct: 5 SMQAARCPTDELSLSNCAVVSEKDYQS----GQHVIVRTSPNHKYIFTLRTHPSVVPGSV 60
Query: 74 ALNSVQRRHAKVSTGDH--VSLNRFIPPEDFNLALLTVELEFV-KKGSKNEQVDAVLLAN 130
A + QR+ A +S G V+L F + + +T+E++F+ KK + D +A
Sbjct: 61 AFSLPQRKWAGLSIGQEIEVALYSFDKAKQC-IGTMTIEIDFLQKKNIDSNPYDTDKMAA 119
Query: 131 QLRKRFINQVMTAGQRVVFEYHGNNY------IFTVNGAAVEGQE---KSNALERGIITN 181
+ ++F NQ + GQ++VF ++ + I ++ + ++G+ K +E G++
Sbjct: 120 EFIQQFNNQAFSVGQQLVFSFNDKLFGLLVKDIEAMDPSILKGEPASGKRQKIEVGLVVG 179
Query: 182 ETYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRV 240
+ FE + +S + ++ + + N + ++N + +GIGGL EF+DIFRRAFASRV
Sbjct: 180 NSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRV 239
Query: 241 FPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETE 300
FPP + ++G KHVKG+LLYGPPG GKTL+ARQIGKMLN EPK+VNGPE+L+K+VGE+E
Sbjct: 240 FPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESE 299
Query: 301 KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
NIR LFADAE +QR G S LH+IIFDEIDAICK RGS TGVHD++VNQLL+KID
Sbjct: 300 ANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKID 359
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
GVE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GRLQIL IHT +M+ +
Sbjct: 360 GVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQL 419
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD---EESIKVTMD 477
L+ DV+++ELA TKN+SGAELEG+ ++A S A+NR + + VD ES++VT
Sbjct: 420 LSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVE-VDMEKAESLQVTRG 478
Query: 478 DFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVT 536
DFL +L +I PAFG + +D +NG++ GD + LLV+Q K S +PLV+
Sbjct: 479 DFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVS 538
Query: 537 CLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXX 596
LLEGP SGKTALAA +S+FPF+KI S + MIG E+ KC + K+F+DAYKS
Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598
Query: 597 XXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGIC 656
YVPIGPRFSN++ Q + IGTTS L + +
Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML 658
Query: 657 DAFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
+AFS T HVP + T + + L+ L F +++ + ++ + + IKKL MLIEM
Sbjct: 659 NAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEM 716
>MGI|MGI:104560 [details] [associations]
symbol:Nsf "N-ethylmaleimide sensitive fusion protein"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001921 "positive regulation of receptor
recycling" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005795 "Golgi stack" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO;IMP] [GO:0006810 "transport"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=ISO] [GO:0015031 "protein
transport" evidence=ISO] [GO:0016192 "vesicle-mediated transport"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0017137 "Rab
GTPase binding" evidence=ISO] [GO:0017157 "regulation of
exocytosis" evidence=ISO] [GO:0019905 "syntaxin binding"
evidence=IDA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0043008 "ATP-dependent
protein binding" evidence=ISO] [GO:0043198 "dendritic shaft"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
MGI:MGI:104560 Pfam:PF02359 GO:GO:0005886 GO:GO:0005524
GO:GO:0016192 GO:GO:0046872 GO:GO:0015031 GO:GO:0043198
GO:GO:0005795 GO:GO:0019905 GO:GO:0006813 eggNOG:COG0464
GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933 SMART:SM01072
SMART:SM01073 GO:GO:0017157 GeneTree:ENSGT00530000064085 KO:K06027
OMA:IFTLRTH HOVERGEN:HBG000324 CTD:4905 OrthoDB:EOG4DZ1TR
ChiTaRS:NSF EMBL:U10120 EMBL:AK028415 EMBL:AK032120 EMBL:AK049281
EMBL:AK051430 EMBL:AK085086 EMBL:AK153905 EMBL:AL596108
EMBL:AL603829 EMBL:BC006627 EMBL:BC019167 IPI:IPI00656325
RefSeq:NP_032766.2 UniGene:Mm.260117 UniGene:Mm.474887
ProteinModelPortal:P46460 SMR:P46460 IntAct:P46460 MINT:MINT-89339
STRING:P46460 PhosphoSite:P46460 REPRODUCTION-2DPAGE:P46460
PaxDb:P46460 PRIDE:P46460 Ensembl:ENSMUST00000103075 GeneID:18195
KEGG:mmu:18195 UCSC:uc007lvt.1 InParanoid:P46460 NextBio:293548
Bgee:P46460 CleanEx:MM_NSF Genevestigator:P46460
GermOnline:ENSMUSG00000034187 Uniprot:P46460
Length = 744
Score = 1439 (511.6 bits), Expect = 2.4e-147, P = 2.4e-147
Identities = 313/718 (43%), Positives = 446/718 (62%)
Query: 14 TMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQI 73
TM P+ +L+L+N A + D + ++ + + ++ +L +HPSV G I
Sbjct: 5 TMQAARCPTDELSLSNCAVVNEKDFQS----GQHVMVRTSPNHKYIFTLRTHPSVVPGCI 60
Query: 74 ALNSVQRRHAKVSTGD--HVSLNRFIPPEDFNLALLTVELEFV-KKGSKNEQVDAVLLAN 130
A + QR+ A +S G V+L F + + +T+E++F+ KK + D +A
Sbjct: 61 AFSLPQRKWAGLSIGQDIEVALYSFDKAKQC-IGTMTIEIDFLQKKNIDSNPYDTDKMAA 119
Query: 131 QLRKRFINQVMTAGQRVVFEYHGNNY------IFTVNGAAVEGQE---KSNALERGIITN 181
+ ++F NQ + GQ++VF ++ + I ++ + ++G+ K +E G++
Sbjct: 120 EFIQQFNNQAFSVGQQLVFSFNDKLFGLLVKDIEAMDPSILKGEPASGKRQKIEVGLVVG 179
Query: 182 ETYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRV 240
+ FE + +S + ++ + + N + ++N + +GIGGL EF+DIFRRAFASRV
Sbjct: 180 NSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRV 239
Query: 241 FPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETE 300
FPP + ++G KHVKG+LLYGPPG GKTL+ARQIGKMLN EPK+VNGPE+L+K+VGE+E
Sbjct: 240 FPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESE 299
Query: 301 KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
NIR LFADAE +QR G S LH+IIFDEIDAICK RGS TGVHD++VNQLL+KID
Sbjct: 300 ANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKID 359
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
GVE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GRLQIL IHT +M+ +
Sbjct: 360 GVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQL 419
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD---EESIKVTMD 477
L+ DV+++ELA TKN+SGAELEG+ ++A S A+NR + + VD ES++VT
Sbjct: 420 LSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVE-VDMEKAESLQVTRG 478
Query: 478 DFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVT 536
DFL +L +I PAFG + +D +NG++ GD + LLV+Q K S +PLV+
Sbjct: 479 DFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVS 538
Query: 537 CLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXX 596
LLEGP SGKTALAA +S+FPF+KI S + MIG E+ KC + K+F+DAYKS
Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598
Query: 597 XXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGIC 656
YVPIGPRFSN++ Q + IGTTS L + +
Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML 658
Query: 657 DAFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
+AFS T HVP + T + + L+ L F +++ + ++ + + IKKL MLIEM
Sbjct: 659 NAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEM 716
>ZFIN|ZDB-GENE-030616-37 [details] [associations]
symbol:nsfa "N-ethylmaleimide-sensitive factor a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0014037 "Schwann
cell differentiation" evidence=IMP] [GO:0048932 "myelination of
posterior lateral line nerve axons" evidence=IMP] [GO:0048929
"efferent axon development in posterior lateral line nerve"
evidence=IMP] [GO:0048933 "afferent axon development in posterior
lateral line nerve" evidence=IMP] [GO:0014044 "Schwann cell
development" evidence=IMP] [GO:0048914 "myelination of anterior
lateral line nerve axons" evidence=IMP] [GO:0048592 "eye
morphogenesis" evidence=IMP] [GO:0048794 "swim bladder development"
evidence=IMP] [GO:0051875 "pigment granule localization"
evidence=IMP] [GO:0045162 "clustering of voltage-gated sodium
channels" evidence=IMP] [GO:0021854 "hypothalamus development"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-030616-37
GO:GO:0005524 GO:GO:0017111 GO:GO:0045162 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0014044 GO:GO:0021854
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GO:GO:0048592 HOVERGEN:HBG000324 HSSP:P18708 GO:GO:0048794
GO:GO:0048929 GO:GO:0048932 GO:GO:0048914 EMBL:BC050490
IPI:IPI00611897 UniGene:Dr.9155 ProteinModelPortal:Q7ZU50
SMR:Q7ZU50 STRING:Q7ZU50 PRIDE:Q7ZU50 ArrayExpress:Q7ZU50
Bgee:Q7ZU50 GO:GO:0048933 GO:GO:0051875 Uniprot:Q7ZU50
Length = 744
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 316/718 (44%), Positives = 442/718 (61%)
Query: 14 TMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQI 73
TM P+ +L+LTN A S DL + ++ + + FV ++ H SV G I
Sbjct: 5 TMQAARCPTDELSLTNCAVVSEKDLQS----GQHVTVRTTTTHKFVFTVKGHHSVLPGTI 60
Query: 74 ALNSVQRRHAKVSTGDHVSLNRFIPPEDFN-LALLTVELEFV-KKGSKNEQVDAVLLANQ 131
A + QR+ A +S G + ++ + + + +T+E++F+ KK + + D+ +A +
Sbjct: 61 AFSLPQRKWAGLSIGQEIEVSNYNFDKSRQCIGAMTIEIDFLQKKSTDSSPYDSDKMAAE 120
Query: 132 LRKRFINQVMTAGQRVVFEYHGNNY------IFTVNGAAVEGQE---KSNALERGIITNE 182
+ F NQ + GQ++VF + + I ++ + ++G+ K +E G++
Sbjct: 121 FIQHFNNQSFSVGQQLVFSFCDKLFGLLIKDIEAMDSSILKGEPASGKKQKIEVGLLVGN 180
Query: 183 TYFVFEASNDSGIKIVNQREG--ANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRV 240
+ +FE S S + +V + + A I + ++N + +GIGGL EF+DIFRRAFASRV
Sbjct: 181 SQVIFEKSESSSLTLVGKAKTKEARQTII-NPDWNFEKMGIGGLDKEFSDIFRRAFASRV 239
Query: 241 FPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETE 300
FPP + ++G KHVKG+LL+GPPG GKTLMARQIGKMLN EPKIVNGPE+L+K+VGE+E
Sbjct: 240 FPPDIVEQMGCKHVKGILLFGPPGCGKTLMARQIGKMLNAREPKIVNGPEILNKYVGESE 299
Query: 301 KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
NIR LFADAE +Q+ G S LH+IIFDE+DAICK RG+ TGVHD++VNQLL+KID
Sbjct: 300 ANIRKLFADAEEEQKRLGANSGLHIIIFDELDAICKQRGTGASSTGVHDTVVNQLLSKID 359
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
GVE LNN+L+IGMTNR D++DEAL+RPGR EV++EI LPDE GR+QIL IHT KM+E
Sbjct: 360 GVEQLNNILVIGMTNRPDLIDEALMRPGRFEVKMEIGLPDEKGRVQILNIHTAKMREFKL 419
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD---EESIKVTMD 477
LA DV+++ELAA TKNYSGAELEG+ ++A S +NR + T VD E ++VT
Sbjct: 420 LASDVDVKELAAETKNYSGAELEGLVRAAQSTVMNRHIKATS-TVEVDMERAEKLQVTRT 478
Query: 478 DFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVT 536
DF+ +L +I PAFG + +D +NG++ GD + + LLV+Q K S +PLV+
Sbjct: 479 DFMASLNNDIKPAFGTNQEDYSSYIMNGIIKWGDPVTRVLEDGELLVQQTKNSDRTPLVS 538
Query: 537 CLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXX 596
LLEGP SGKTALAA DS FPF+KI S + MIG E +KC I K+F+DAYKS
Sbjct: 539 VLLEGPPHSGKTALAAKISEDSQFPFIKICSPDKMIGHSEISKCQAIKKIFDDAYKSQLS 598
Query: 597 XXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGIC 656
YVPIGPRFSN++ Q + IGTTS L + +
Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKTPPHGRKLLIIGTTSRKDVLQEMEML 658
Query: 657 DAFSVTYHVPTLKTDD-AKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
DAFS T HV + + D + L+ L F + + + ++ + + IKKL MLIEM
Sbjct: 659 DAFSTTIHVQNISSGDHLVEALELLGSFTDAERTTIAQHVKGKRVWIGIKKLLMLIEM 716
>ZFIN|ZDB-GENE-050808-1 [details] [associations]
symbol:nsfb "N-ethylmaleimide-sensitive factor b"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-050808-1 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
KO:K06027 HOVERGEN:HBG000324 EMBL:DQ022212 IPI:IPI00862410
RefSeq:NP_001019625.1 UniGene:Dr.94035 ProteinModelPortal:Q4U0S6
SMR:Q4U0S6 GeneID:554200 KEGG:dre:554200 CTD:554200
NextBio:20880726 Uniprot:Q4U0S6
Length = 747
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 315/718 (43%), Positives = 446/718 (62%)
Query: 15 MNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIA 74
M P+ +L+LTN S D F+ +L + + FV ++ +HPSV G IA
Sbjct: 6 MQAARCPTDELSLTNCVVASEKD---FK-SGQHLTIKTTPTQKFVFTVRTHPSVVPGTIA 61
Query: 75 LNSVQRRHAKVSTGD--HVSLNRFIPPEDFNLALLTVELEFVKKGS-KNEQVDAVLLANQ 131
+ QR+ A +S VS+ F P + + +T+E++F++K S + D+ +A +
Sbjct: 62 FSLPQRKWAGLSLNQDVEVSVYNFDPSRQY-VGTMTIEIDFLQKKSIDSNPYDSDKMAIE 120
Query: 132 LRKRFINQVMTAGQRVVFEYHGNNYIFTVNG------AAVEGQE---KSNALERGIITNE 182
+ F Q + Q+ VF + + + + + G++ K + ++ G++
Sbjct: 121 FIQCFTAQAFSMSQQFVFSFCDKLFALVIKDIEAMDPSILRGEQNSSKKHKIDIGLLHGN 180
Query: 183 TYFVFEASNDSGIKIVNQRE--GANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRV 240
+ +FE + S + ++ + + G+ +I + ++N + +GIGGL EF+DIFRRAFASRV
Sbjct: 181 SQVIFEKAESSSVNLIGKAKTKGSRQSII-NPDWNFERMGIGGLDKEFSDIFRRAFASRV 239
Query: 241 FPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETE 300
FPP + ++G KHVKG+LL+GPPG GKTLMARQIGKMLN EPK+VNGPE+L+K+VGE+E
Sbjct: 240 FPPDIVEQMGCKHVKGILLFGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNKYVGESE 299
Query: 301 KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
NIR LFADAE +Q+ G S LH+IIFDEIDAICK RGS TGVHD++VNQLL+KID
Sbjct: 300 ANIRKLFADAEEEQKRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKID 359
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
GVE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GR+QIL IHT KMK+++
Sbjct: 360 GVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDETGRVQILNIHTAKMKQSNM 419
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEE---SIKVTMD 477
LA DV+++ELA TKNYSGAELEG+ ++A S A+NR + + VD E +++V+
Sbjct: 420 LAKDVDVKELAVETKNYSGAELEGLVRAAQSTAMNRHIKATTQVE-VDTEKAQTLQVSRS 478
Query: 478 DFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVT 536
DFL +L +I PAFG++ +D +NG+V + I LLV+Q K S+ +PLVT
Sbjct: 479 DFLASLNNDIKPAFGSNQEDYSSYIMNGIVKWSNAVSDILGDGELLVQQTKNSERTPLVT 538
Query: 537 CLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXX 596
LLEGP+ SGKTALAA S FPF+KI S + MIG E+ KC I K+FEDAYKS
Sbjct: 539 VLLEGPAHSGKTALAAKIAEQSQFPFIKICSPDKMIGFTETAKCQAIKKIFEDAYKSQLS 598
Query: 597 XXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGIC 656
+VPIGPRFSN++ Q + +GTTS L +G+
Sbjct: 599 CVVVDDIERLLDFVPIGPRFSNLVLQALLVLLKKPPPRGRKLLILGTTSRKDVLQEMGMS 658
Query: 657 DAFSVTYHVPTL-KTDDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
D+FS T H+P + + + + L+ L F EE+ + + + + IKKL MLIEM
Sbjct: 659 DSFSTTIHIPNISRGEHLMEALELLGGFQEEERANIGKQVKGQSVWLGIKKLQMLIEM 716
>RGD|621594 [details] [associations]
symbol:Nsf "N-ethylmaleimide-sensitive factor" species:10116
"Rattus norvegicus" [GO:0001921 "positive regulation of receptor
recycling" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO;IDA;TAS] [GO:0006813 "potassium ion
transport" evidence=ISO] [GO:0006906 "vesicle fusion" evidence=TAS]
[GO:0006944 "cellular membrane fusion" evidence=TAS] [GO:0007269
"neurotransmitter secretion" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0014069 "postsynaptic
density" evidence=IDA;TAS] [GO:0015031 "protein transport"
evidence=IMP] [GO:0016192 "vesicle-mediated transport"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA;TAS]
[GO:0017137 "Rab GTPase binding" evidence=IDA] [GO:0017157
"regulation of exocytosis" evidence=IMP] [GO:0019905 "syntaxin
binding" evidence=ISO] [GO:0030165 "PDZ domain binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0043008
"ATP-dependent protein binding" evidence=IPI] [GO:0043198
"dendritic shaft" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 RGD:621594 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0014069 GO:GO:0046872 GO:GO:0015031
GO:GO:0043198 GO:GO:0005795 GO:GO:0016887 GO:GO:0006813
eggNOG:COG0464 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0017137 GO:GO:0007269 GO:GO:0042623
GO:GO:0006906 InterPro:IPR004201 Pfam:PF02933 SMART:SM01072
SMART:SM01073 GO:GO:0017157 KO:K06027 HOGENOM:HOG000198544
HOVERGEN:HBG000324 CTD:4905 OrthoDB:EOG4DZ1TR EMBL:AF142097
EMBL:AF189019 IPI:IPI00210635 RefSeq:NP_068516.1 UniGene:Rn.13345
HSSP:P18708 ProteinModelPortal:Q9QUL6 SMR:Q9QUL6 IntAct:Q9QUL6
STRING:Q9QUL6 PhosphoSite:Q9QUL6 World-2DPAGE:0004:Q9QUL6
PRIDE:Q9QUL6 GeneID:60355 KEGG:rno:60355 UCSC:RGD:621594
InParanoid:Q9QUL6 NextBio:612027 ArrayExpress:Q9QUL6
Genevestigator:Q9QUL6 GermOnline:ENSRNOG00000003905 Uniprot:Q9QUL6
Length = 744
Score = 1433 (509.5 bits), Expect = 1.0e-146, P = 1.0e-146
Identities = 312/718 (43%), Positives = 446/718 (62%)
Query: 14 TMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQI 73
TM P+ +L+L+N A + D + ++ + + ++ +L +HPSV G I
Sbjct: 5 TMQAARCPTDELSLSNCAVVNEKDYQS----GQHVMVRTSPNHKYIFTLRTHPSVVPGCI 60
Query: 74 ALNSVQRRHAKVSTGD--HVSLNRFIPPEDFNLALLTVELEFV-KKGSKNEQVDAVLLAN 130
A + QR+ A +S G V+L F + + +T+E++F+ KK + D +A
Sbjct: 61 AFSLPQRKWAGLSIGQDIEVALYSFDKAKQC-IGTMTIEIDFLQKKNIDSNPYDTDKMAA 119
Query: 131 QLRKRFINQVMTAGQRVVFEYHGNNY------IFTVNGAAVEGQE---KSNALERGIITN 181
+ ++F +Q + GQ++VF ++ + I ++ + ++G+ K +E G++
Sbjct: 120 EFIQQFNHQAFSVGQQLVFSFNDKLFGLLVKDIEAMDPSILKGEPASGKRQKIEVGLVVG 179
Query: 182 ETYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRV 240
+ FE + +S + ++ + + N + ++N + +GIGGL EF+DIFRRAFASRV
Sbjct: 180 NSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRV 239
Query: 241 FPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETE 300
FPP + ++G KHVKG+LLYGPPG GKTL+ARQIGKMLN EPK+VNGPE+L+K+VGE+E
Sbjct: 240 FPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESE 299
Query: 301 KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
NIR LFADAE +QR G S LH+IIFDEIDAICK RGS TGVHD++VNQLL+KID
Sbjct: 300 ANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKID 359
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
GVE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GRLQIL IHT +M+ +
Sbjct: 360 GVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQL 419
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD---EESIKVTMD 477
L+ DV+++ELA TKN+SGAELEG+ ++A S A+NR + + VD ES++VT
Sbjct: 420 LSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVE-VDMEKAESLQVTRG 478
Query: 478 DFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVT 536
DFL +L +I PAFG + +D +NG++ GD + LLV+Q K S +PLV+
Sbjct: 479 DFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVS 538
Query: 537 CLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXX 596
LLEGP SGKTALAA +S+FPF+KI S + MIG E+ KC + K+F+DAYKS
Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598
Query: 597 XXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGIC 656
YVPIGPRFSN++ Q + IGTTS L + +
Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML 658
Query: 657 DAFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
+AFS T HVP + T + + L+ L F +++ + ++ + + IKKL MLIEM
Sbjct: 659 NAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEM 716
>UNIPROTKB|F1RRS3 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:CU928092 Ensembl:ENSSSCT00000018852 Uniprot:F1RRS3
Length = 752
Score = 1428 (507.7 bits), Expect = 3.5e-146, P = 3.5e-146
Identities = 308/717 (42%), Positives = 446/717 (62%)
Query: 14 TMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQI 73
+M P+ +L+L+N A + D + ++ + + + +L +HPSV G I
Sbjct: 5 SMQAARCPTDELSLSNCAVVNEKDFQS----GQHVVVRTSPNHRYTFTLRTHPSVVPGSI 60
Query: 74 ALNSVQRRHAKVSTGDHVSLNRFIPPEDFN-LALLTVELEFVKKGS-KNEQVDAVLLANQ 131
A + QR+ A +S G + ++ + + + +T+E++F++K S + D +A +
Sbjct: 61 AFSLPQRKWAGLSIGQEIEVSSYTFDKAKQCIGTMTMEIDFLQKKSIDSNPYDTDKMAAE 120
Query: 132 LRKRFINQVMTAGQRVVFEYHGNNY------IFTVNGAAVEGQE---KSNALERGIITNE 182
++F NQ + Q++VF ++ + I ++ + ++G+ K +E G++
Sbjct: 121 FIQQFNNQAFSVAQQLVFSFNEKLFGLLVKDIEAMDPSILKGEPGTGKRQKIEVGLVVGN 180
Query: 183 TYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVF 241
+ FE + +S + ++ + + N + ++N + +GIGGL EF+DIFRRAFASRVF
Sbjct: 181 SQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVF 240
Query: 242 PPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEK 301
PP + ++G KHVKG+LLYGPPG GKTL+ARQIGKMLN EPK+VNGPE+L+K+VGE+E
Sbjct: 241 PPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEA 300
Query: 302 NIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDG 361
NIR LFADAE +QR G S LH+IIFDEIDAICK RGS TGVHD++VNQLL+KIDG
Sbjct: 301 NIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDG 360
Query: 362 VESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFL 421
VE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GRLQIL IHT +M+ + L
Sbjct: 361 VEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLL 420
Query: 422 APDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD---EESIKVTMDD 478
+ DV+++ELA TKN+SGAELEG+ ++A S A+NR + + VD ES++VT D
Sbjct: 421 SADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVE-VDMEKAESLQVTRGD 479
Query: 479 FLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTC 537
FL +L +I PAFG + +D +NG++ GD + + LLV+Q K S +PLV+
Sbjct: 480 FLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLEDGELLVQQTKNSDRTPLVSV 539
Query: 538 LLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXXX 597
LLEGP SGKTALAA +S+FPF+KI S + MIG E+ KC + K+F+DAYKS
Sbjct: 540 LLEGPPHSGKTALAARIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSC 599
Query: 598 XXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGICD 657
YVPIGPRFSN++ Q + IGTTS L + + +
Sbjct: 600 VVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLN 659
Query: 658 AFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
AFS T HVP + T + + L+ L F +++ + ++ + + IKKL MLIEM
Sbjct: 660 AFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEM 716
>DICTYBASE|DDB_G0276153 [details] [associations]
symbol:nsfA "N-ethylmaleimide-sensitive fusion
protein" species:44689 "Dictyostelium discoideum" [GO:0006928
"cellular component movement" evidence=IMP] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0276153 GO:GO:0005524 GO:GO:0016020
GO:GO:0046872 GO:GO:0015031 GO:GO:0006909 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0006928 GO:GO:0010008 GO:GO:0006935
GO:GO:0030659 HSSP:Q01853 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 KO:K06027 OMA:MTSGQRV
EMBL:AF006826 RefSeq:XP_643273.1 ProteinModelPortal:Q75JI3
IntAct:Q75JI3 STRING:Q75JI3 EnsemblProtists:DDB0185052
GeneID:8620316 KEGG:ddi:DDB_G0276153 Uniprot:Q75JI3
Length = 738
Score = 1387 (493.3 bits), Expect = 7.8e-142, P = 7.8e-142
Identities = 306/697 (43%), Positives = 425/697 (60%)
Query: 26 ALTNLAYCSPADLLNFRVPN--SNLFLAS-------VAGDSFVLSLASHPSVNKGQIALN 76
A TN AY P +F PN SNL+ + V + ++LS + + ++ IAL+
Sbjct: 24 AFTNRAYL-PISSFSFLFPNVQSNLYTTNTNYIKIRVGANEYILSASPNKNMKPDSIALS 82
Query: 77 SVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEFVKKGSKNEQVDAVLLANQLRKRF 136
R VS + V + F P + V ++++ KG + + D+ + ++ F
Sbjct: 83 KALRGWMYVSNNEEVYVE-FYDPNPNICGSMKVSIDYLTKGKQGPKQDSQEIIGKIIDNF 141
Query: 137 INQVMTAGQRVVFEYHGNNYIFTVNGAAVEGQEKSNALERG--IITNETYFVFEASNDSG 194
+Q T GQ +F +N F + AVE E ++G II+ T + + S
Sbjct: 142 NSQYFTFGQ--LFYIKNSNSTFELRVEAVETNEVPTK-DKGWAIISPATKIILQKMPGSL 198
Query: 195 IKIVNQREGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHV 254
I I + IF +++ +++GIGGL AEF DIFRRAF+SR+FPP + KLG+ HV
Sbjct: 199 IDIETNGPLVVNQIFT-SDWDFENMGIGGLDAEFRDIFRRAFSSRIFPPAIVKKLGVNHV 257
Query: 255 KGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQ 314
KGMLLYGPPGTGKTL+ARQIGKMLNG EPK+V+GP +L+K+VG++E+NIR LF DAE +Q
Sbjct: 258 KGMLLYGPPGTGKTLIARQIGKMLNGREPKVVSGPSILNKYVGQSEENIRMLFRDAEIEQ 317
Query: 315 RTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMT 374
+ +GD S LH+IIFDE+DAICKSRGS + +GV DS+VNQLL IDGVESLNN+L+IGMT
Sbjct: 318 KAKGDDSGLHIIIFDELDAICKSRGSRQGDSGVGDSVVNQLLAMIDGVESLNNILVIGMT 377
Query: 375 NRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAART 434
NRKDM+DEALLRPGRLEV VEISLPDE+GR QI +IHT KM++ + L DVNL A T
Sbjct: 378 NRKDMIDEALLRPGRLEVHVEISLPDEHGREQIFKIHTAKMRDQNALDKDVNLANYAHTT 437
Query: 435 KNYSGAELEGVAKSAVSFALNRQLSMDDLTK-PVDEESIKVTMDDFLHALYEIVPAFGAS 493
+NYSGAE+EGV KSA S+A +RQ+ ++ + E IKV DF A+ E+ P+FG++
Sbjct: 438 RNYSGAEIEGVVKSAASYAFSRQVDTKNIKNVEIKPEDIKVCDQDFKRAITEVTPSFGST 497
Query: 494 TDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAAT 553
+ E NG+++ G + Q VEQVK S +P+++ LL G G GK++LAAT
Sbjct: 498 DNQFESYAENGIINYGPVFDKLLQSGNAFVEQVKKSNRTPMMSVLLSGRPGCGKSSLAAT 557
Query: 554 AGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXXXXXXXXXXXXXXYVPIG 613
S+FPF +IIS ++G +ES K ++I KVFED+YKSP YVPIG
Sbjct: 558 LAKSSEFPFTRIISPNDLLGYNESAKASKITKVFEDSYKSPMSCVVVDEIERLIEYVPIG 617
Query: 614 PRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGICDAFSVTYHVPTLKT-DD 672
PRFSN+I QT+ I TTS L + I D F+ VP++ T +
Sbjct: 618 PRFSNLILQTLAVLFKRTPPKGRKLLVIATTSNPDILKDMDIMDCFATVLSVPSISTAKE 677
Query: 673 AKKVLKQLNVFAEEDVDSASEALNDMPIKKLYMLIEM 709
+ V +L +E ++AS + + IK++ M++EM
Sbjct: 678 FQTVCFELGFTQKEASEAASFFTSPITIKQIIMIVEM 714
>POMBASE|SPAC1834.11c [details] [associations]
symbol:sec18 "secretory pathway protein Sec18
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 PomBase:SPAC1834.11c Pfam:PF02359 GO:GO:0005524
GO:GO:0005737 GO:GO:0006886 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 eggNOG:COG0464 GO:GO:0006888 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042144 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 PIR:T50122 RefSeq:NP_594690.1
ProteinModelPortal:Q9P7Q4 STRING:Q9P7Q4 EnsemblFungi:SPAC1834.11c.1
GeneID:2542410 KEGG:spo:SPAC1834.11c OrthoDB:EOG4PVS6W
NextBio:20803469 Uniprot:Q9P7Q4
Length = 792
Score = 1374 (488.7 bits), Expect = 1.9e-140, P = 1.9e-140
Identities = 301/688 (43%), Positives = 425/688 (61%)
Query: 17 VINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIALN 76
++ S + ALTN SP D F+ ++ + +S V S P +G + +
Sbjct: 63 IVKATSTEDALTNCIIVSPMD---FK----QQYI--IVDNSRVFSTKPVPGFPQGCLGAS 113
Query: 77 SVQRRHAKVSTGDHVSLNRFIP--PEDFN-LALLTVELEFVKKG-SKNEQVDAVLLANQL 132
R A S V + + P P L +T+E++F + + NE D +A
Sbjct: 114 QPHREWASWSLNQQVHVADYDPYGPHGAPYLHSMTLEVDFQNRNRTTNEPFDGEEMAKLF 173
Query: 133 RKRFINQVMTAGQRVVFEYHGNNYIFTVNGAAV------EGQEKSNALE---RGIITNET 183
+ +QV + GQ++VF++ N TV + E Q+ N + RG++T++T
Sbjct: 174 CSSYQSQVFSPGQKIVFDFRSYNIKATVRTISCVDLLIGENQDAENTADTSKRGLLTSQT 233
Query: 184 YFVFEASNDSGIKIVNQREGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPP 243
F + S +++ SN F + +GIGGL +EF+ IFRRAFASR+FPP
Sbjct: 234 EIQFFKAAHSALRLKASMTRPASNAILQPGFKFEDMGIGGLDSEFSAIFRRAFASRLFPP 293
Query: 244 HVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNI 303
+ KLGI HVKG+LLYGPPGTGKTL+ARQIGKMLN EPKIVNGPE+L+K+VG++E+N+
Sbjct: 294 GMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENV 353
Query: 304 RDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVE 363
R LFADAE + R RG++S LH+IIFDE+DAICK RGS+ TGV D +VNQLL K+DGV+
Sbjct: 354 RKLFADAEREYRDRGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQVVNQLLAKMDGVD 413
Query: 364 SLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAP 423
LNN+L+IGMTNRKDM+DEALLRPGRLEV +EISLPDE+GRLQIL+IHT++M N L
Sbjct: 414 QLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILEN 473
Query: 424 DVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDE--ESIKVTMDDFLH 481
DV+++ELA+ TKN+SGAE+ G+ KSA SFA R + + T V E+IKV +DFL+
Sbjct: 474 DVDMEELASLTKNFSGAEIAGLIKSASSFAFYRHIKVGT-TAAVSGNLENIKVNRNDFLN 532
Query: 482 ALYEIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEG 541
AL E+ PA+G S ++LE G+++ G + I L V+QVK S+ + LV+ LL G
Sbjct: 533 ALSEVRPAYGVSEEELESRVQGGIINFGKHIEEIITEGKLFVQQVKNSERTRLVSVLLSG 592
Query: 542 PSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXXXXXXX 601
P SGKTALAAT + S+FPFVK++SAESM+G++E+ + A + +VFED+YKSP
Sbjct: 593 PIASGKTALAATIALGSEFPFVKLVSAESMVGMNENARVAHVNRVFEDSYKSPLSVIVVD 652
Query: 602 XXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGICDAFSV 661
+VPIGPRFSN + QT+ + TTSE + L + + +F
Sbjct: 653 EIERIIDWVPIGPRFSNTLLQTLMVLFKKQPPKGHRLLILATTSERTMLSRMDMTQSFDA 712
Query: 662 TYHVPTLKT-DDAKKVLKQLNVFAEEDV 688
VP + + ++++ ++ FA+ +V
Sbjct: 713 EIAVPNVSNVTELDRIIQSIDSFADSNV 740
>UNIPROTKB|B4DFA2 [details] [associations]
symbol:NSF "cDNA FLJ59316, highly similar to Vesicle-fusing
ATPase (EC 3.6.4.6)" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006813 "potassium ion transport"
evidence=IEA] [GO:0019905 "syntaxin binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016192 GO:GO:0015031
GO:GO:0043198 GO:GO:0005795 GO:GO:0006813 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 GO:GO:0017157
EMBL:AC138645 HOVERGEN:HBG000324 EMBL:AC217780 UniGene:Hs.431279
HGNC:HGNC:8016 ChiTaRS:NSF EMBL:AK294001 IPI:IPI00985110 SMR:B4DFA2
STRING:B4DFA2 Ensembl:ENST00000225282 Uniprot:B4DFA2
Length = 644
Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
Identities = 289/623 (46%), Positives = 403/623 (64%)
Query: 107 LTVELEFVKKGS-KNEQVDAVLLANQLRKRFINQVMTAGQRVVFEYHGNNY------IFT 159
+T+E++F++K S + D +A + ++F NQ + GQ++VF ++ + I
Sbjct: 1 MTIEIDFLQKKSIDSNPYDTDKMAAEFIQQFNNQAFSVGQQLVFSFNEKLFGLLVKDIEA 60
Query: 160 VNGAAVEGQE---KSNALERGIITNETYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFN 215
++ + ++G+ K +E G++ + FE + +S + ++ + + N + ++N
Sbjct: 61 MDPSILKGEPATGKRQKIEVGLVVGNSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWN 120
Query: 216 LQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIG 275
+ +GIGGL EF+DIFRRAFASRVFPP + ++G KHVKG+LLYGPPG GKTL+ARQIG
Sbjct: 121 FEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIG 180
Query: 276 KMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAIC 335
KMLN EPK+VNGPE+L+K+VGE+E NIR LFADAE +QR G S LH+IIFDEIDAIC
Sbjct: 181 KMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAIC 240
Query: 336 KSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVE 395
K RGS TGVHD++VNQLL+KIDGVE LNN+L+IGMTNR D++DEALLRPGRLEV++E
Sbjct: 241 KQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKME 300
Query: 396 ISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN 455
I LPDE GRLQIL IHT +M+ + L+ DV+++ELA TKN+SGAELEG+ ++A S A+N
Sbjct: 301 IGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMN 360
Query: 456 RQLSMDDLTKPVD---EESIKVTMDDFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDR 511
R + + VD ES++VT DFL +L +I PAFG + +D +NG++ GD
Sbjct: 361 RHIKASTKVE-VDMEKAESLQVTRGDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDP 419
Query: 512 HKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESM 571
+ LLV+Q K S +PLV+ LLEGP SGKTALAA +S+FPF+KI S + M
Sbjct: 420 VTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKM 479
Query: 572 IGLHESTKCAQIVKVFEDAYKSPXXXXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXX 631
IG E+ KC + K+F+DAYKS YVPIGPRFSN++ Q +
Sbjct: 480 IGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKA 539
Query: 632 XXXXXXXXXIGTTSEVSFLDSVGICDAFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDS 690
IGTTS L + + +AFS T HVP + T + + L+ L F +++ +
Sbjct: 540 PPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTT 599
Query: 691 ASEALND----MPIKKLYMLIEM 709
++ + + IKKL MLIEM
Sbjct: 600 IAQQVKGKKVWIGIKKLLMLIEM 622
>FB|FBgn0013998 [details] [associations]
symbol:Nsf2 "NEM-sensitive fusion protein 2" species:7227
"Drosophila melanogaster" [GO:0005737 "cytoplasm" evidence=ISS;NAS]
[GO:0007269 "neurotransmitter secretion" evidence=NAS] [GO:0016082
"synaptic vesicle priming" evidence=NAS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS;NAS] [GO:0016192
"vesicle-mediated transport" evidence=NAS] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=NAS] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0031201
"SNARE complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0015031 GO:GO:0007274
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0008582 GO:GO:0016082 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OrthoDB:EOG4RFJ7K
EMBL:U30502 EMBL:BT023784 EMBL:U28836 RefSeq:NP_788676.1
UniGene:Dm.6688 ProteinModelPortal:P54351 SMR:P54351
MINT:MINT-1669916 STRING:P54351 PaxDb:P54351 PRIDE:P54351
EnsemblMetazoa:FBtr0082883 GeneID:41694 KEGG:dme:Dmel_CG33101
CTD:41694 FlyBase:FBgn0013998 InParanoid:P54351 OMA:IFTLRTH
PhylomeDB:P54351 GenomeRNAi:41694 NextBio:825088 Bgee:P54351
GermOnline:CG33101 Uniprot:P54351
Length = 752
Score = 1341 (477.1 bits), Expect = 5.8e-137, P = 5.8e-137
Identities = 305/716 (42%), Positives = 430/716 (60%)
Query: 15 MNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIA 74
M I P+ +L+LTN A + +D V ++ F L S P + G +
Sbjct: 9 MRAIKCPTDELSLTNKAIVNVSDFTE-EVKYVDISPGPGLHYIFALEKISGPELPLGHVG 67
Query: 75 LNSVQRRHAKVSTGDHVSLN--RFIPPEDFNLALLTVELEFV-KKGSKNEQVDAVLLANQ 131
+ VQR+ A +S + + RF D + L++ E +F+ KK + E D+ +A +
Sbjct: 68 FSLVQRKWATLSINQEIDVRPYRFDASADI-ITLVSFETDFLQKKTTTQEPYDSDEMAKE 126
Query: 132 LRKRFINQVMTAGQRVVFEYHGNNYI-FTVNGA-AVEGQEKSNALER------GIITNET 183
+F +T GQ +VF++ ++ V AV+ + ++L + G I T
Sbjct: 127 FLMQFAGMPLTVGQTLVFQFKDKKFLGLAVKTLEAVDPRTVGDSLPKTRNVRFGRILGNT 186
Query: 184 YFVFEASNDSGIKIVNQREG--ANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVF 241
FE + +S + + + +G +I + +++ +GIGGL EF IFRRAFASRVF
Sbjct: 187 VVQFEKAENSVLNLQGRSKGKIVRQSII-NPDWDFGKMGIGGLDKEFNAIFRRAFASRVF 245
Query: 242 PPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEK 301
PP + +LGIKHVKG+LLYGPPGTGKTLMARQIG MLN EPKIVNGP++L K+VGE+E
Sbjct: 246 PPELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEA 305
Query: 302 NIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDG 361
NIR LFA+AE +++ G S LH+IIFDEIDAICK+RGS +GVHD++VNQLL KIDG
Sbjct: 306 NIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDG 365
Query: 362 VESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFL 421
VE LNN+L+IGMTNR+DM+DEALLRPGRLEVQ+EISLP+E GR+QIL IHT +M++ + +
Sbjct: 366 VEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKI 425
Query: 422 APDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTK--PVDEESIKVTMDDF 479
A DV+ E+AA+TKN+SGAELEG+ ++A S A+NR + D P E ++VT DF
Sbjct: 426 ASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEKLRVTRADF 485
Query: 480 LHAL-YEIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCL 538
LHAL +I PAFGA+ + LE G+++ G + + ML V+Q K ++ S LV+ L
Sbjct: 486 LHALDNDIKPAFGAAQEMLENLLARGIINWGPPVTELLEDGMLSVQQAKATESSGLVSVL 545
Query: 539 LEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXXXX 598
+EG SGK+ALAA SDFPFVK+ S E M+G ES KC I K+F+DAY+S
Sbjct: 546 IEGAPNSGKSALAANLAQLSDFPFVKVCSPEDMVGFTESAKCLHIRKIFDDAYRSTLSCI 605
Query: 599 XXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGICDA 658
Y PIGPR+SN+ Q + + T+S L+ + + A
Sbjct: 606 VVDNVERLLDYGPIGPRYSNLTLQALLVLLKKQPPKGRKLLILCTSSRRDVLEEMEMLSA 665
Query: 659 FSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
F+ HV L T ++ VL ++F+ E++ S + + + IKKL LI+M
Sbjct: 666 FTSVLHVSNLSTPENVLAVLDDSDLFSPEELQSIARKMAGKRLCIGIKKLLALIDM 721
>GENEDB_PFALCIPARUM|PFC0140c [details] [associations]
symbol:PFC0140c "N-ethylmaleimide-sensitive
fusion protein, putative" species:5833 "Plasmodium falciparum"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016887 HSSP:Q01853
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 EMBL:AL844502 KO:K06027
HOGENOM:HOG000198544 PIR:T18421 RefSeq:XP_001351105.1
ProteinModelPortal:O77313 EnsemblProtists:PFC0140c:mRNA
GeneID:814347 KEGG:pfa:PFC0140c EuPathDB:PlasmoDB:PF3D7_0303000
OMA:ESAHECE ProtClustDB:CLSZ2432490 Uniprot:O77313
Length = 783
Score = 1238 (440.9 bits), Expect = 1.7e-135, Sum P(2) = 1.7e-135
Identities = 254/547 (46%), Positives = 355/547 (64%)
Query: 172 NALERGIITNETYFVFEASNDSGIKIVNQREGANSNIFRHKEFNLQSLGIGGLSAEFADI 231
N ERGI+ T +F + +D G + ++ NI ++ FN + LGIG L EF I
Sbjct: 206 NRYERGILFENTECIFTSISDGGKLCIESKKVLKQNIIKNN-FNFEELGIGALDEEFKTI 264
Query: 232 FRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEV 291
FRR FASR++P ++ +L IKHVKGM+LYGPPGTGKTL+ARQIGK LN EPKI+NGPE+
Sbjct: 265 FRRTFASRIYPNYIIKQLSIKHVKGMILYGPPGTGKTLIARQIGKTLNAREPKIINGPEI 324
Query: 292 LSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGST-RDGTGVHDS 350
L+K+VG++E+NIR+LF DAE + + G+ S LH+II DEIDAIC+ RG+ TGV+DS
Sbjct: 325 LNKYVGQSEENIRNLFKDAEMEYKQSGENSLLHIIILDEIDAICRQRGNVGSSSTGVNDS 384
Query: 351 IVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQI 410
+VNQLL+KIDGV SLNN+LLIGMTNR D++DEALLRPGR E+ +EISLP++ GR+QIL I
Sbjct: 385 VVNQLLSKIDGVNSLNNILLIGMTNRIDLIDEALLRPGRFELHIEISLPNKEGRIQILNI 444
Query: 411 HTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEE 470
HT M+ ++ L+ DVN+ ELA RT N+SGAE+EG+ ++ VS+A R ++ +DLTKP++ +
Sbjct: 445 HTKNMRMSNKLSSDVNILELAERTPNFSGAEIEGLVRNTVSYAFERHINFNDLTKPINAD 504
Query: 471 SIKVTMDDFLHALYEIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSK 530
I +T +DF+ AL E PAFGA D + NG+++ G +++I LL++Q+ ++
Sbjct: 505 DIMITKNDFMKALKETKPAFGAEEDIIGNLLCNGIINYGKEYENIENTCKLLIKQIVDNE 564
Query: 531 GSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDA 590
+ L++ LL G +GSGKT ++A ++F F K I+ E++IG E + I K+FEDA
Sbjct: 565 NTKLMSILLYGENGSGKTTISAYIAKCANFHFTKFITPENLIGYSEIGRINYINKIFEDA 624
Query: 591 YKSPXXXXXXXXXXXXXXYVPIGPRFSNIISQT-MXXXXXXXXXXXXXXXXIGTTSEVSF 649
YK+P Y IGPRFSN I Q M I TTSE F
Sbjct: 625 YKTPLSLVILDNIERLIDYTRIGPRFSNSILQAIMVLIKKKPKKENQKILIICTTSEYQF 684
Query: 650 LDSVGICDAFSVTYHVPTLKTDDA-KKVLKQLNV----FAEEDVDS--ASEALNDMPIKK 702
+ VG+ F V HVP L T + K VL+ N F +++ +S + ++ IK
Sbjct: 685 MKDVGLTKNFFVNIHVPLLSTSSSIKNVLQHRNQTYHDFPNNEIEKVISSNIIKNIAIKN 744
Query: 703 LYMLIEM 709
L M+I+M
Sbjct: 745 LLMIIDM 751
Score = 110 (43.8 bits), Expect = 1.7e-135, Sum P(2) = 1.7e-135
Identities = 39/148 (26%), Positives = 71/148 (47%)
Query: 13 TTMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQ 72
T + S +LALTN + + N + + + S G+ VL L ++ + +
Sbjct: 3 TNLQCCKLQSQELALTNCGFINIGLYNNLKKSVKSNDVYSEVGN-MVLILRGDGNIGREE 61
Query: 73 IALNSVQRRHAKVSTGDHVSLNRFIPPEDFN-----LALLTVELE---FVKKGSKNEQVD 124
IALN+ QR +++ + V +N + E+ N + + ++ELE FVK E D
Sbjct: 62 IALNTCQREFSRIQLKELVEIN-ILDKENKNDLVNFIPIDSIELEVNLFVKPDRLIEMED 120
Query: 125 AVLLANQLRKRFINQVMTAGQRVVFEYH 152
L + +K F+N ++T GQ + +Y+
Sbjct: 121 EKL-EDVFKKYFLNHILTKGQILALKYN 147
>UNIPROTKB|O77313 [details] [associations]
symbol:PFC0140c "N-ethylmaleimide sensitive fusion protein,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016887 HSSP:Q01853 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
EMBL:AL844502 KO:K06027 HOGENOM:HOG000198544 PIR:T18421
RefSeq:XP_001351105.1 ProteinModelPortal:O77313
EnsemblProtists:PFC0140c:mRNA GeneID:814347 KEGG:pfa:PFC0140c
EuPathDB:PlasmoDB:PF3D7_0303000 OMA:ESAHECE ProtClustDB:CLSZ2432490
Uniprot:O77313
Length = 783
Score = 1238 (440.9 bits), Expect = 1.7e-135, Sum P(2) = 1.7e-135
Identities = 254/547 (46%), Positives = 355/547 (64%)
Query: 172 NALERGIITNETYFVFEASNDSGIKIVNQREGANSNIFRHKEFNLQSLGIGGLSAEFADI 231
N ERGI+ T +F + +D G + ++ NI ++ FN + LGIG L EF I
Sbjct: 206 NRYERGILFENTECIFTSISDGGKLCIESKKVLKQNIIKNN-FNFEELGIGALDEEFKTI 264
Query: 232 FRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEV 291
FRR FASR++P ++ +L IKHVKGM+LYGPPGTGKTL+ARQIGK LN EPKI+NGPE+
Sbjct: 265 FRRTFASRIYPNYIIKQLSIKHVKGMILYGPPGTGKTLIARQIGKTLNAREPKIINGPEI 324
Query: 292 LSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGST-RDGTGVHDS 350
L+K+VG++E+NIR+LF DAE + + G+ S LH+II DEIDAIC+ RG+ TGV+DS
Sbjct: 325 LNKYVGQSEENIRNLFKDAEMEYKQSGENSLLHIIILDEIDAICRQRGNVGSSSTGVNDS 384
Query: 351 IVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQI 410
+VNQLL+KIDGV SLNN+LLIGMTNR D++DEALLRPGR E+ +EISLP++ GR+QIL I
Sbjct: 385 VVNQLLSKIDGVNSLNNILLIGMTNRIDLIDEALLRPGRFELHIEISLPNKEGRIQILNI 444
Query: 411 HTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEE 470
HT M+ ++ L+ DVN+ ELA RT N+SGAE+EG+ ++ VS+A R ++ +DLTKP++ +
Sbjct: 445 HTKNMRMSNKLSSDVNILELAERTPNFSGAEIEGLVRNTVSYAFERHINFNDLTKPINAD 504
Query: 471 SIKVTMDDFLHALYEIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSK 530
I +T +DF+ AL E PAFGA D + NG+++ G +++I LL++Q+ ++
Sbjct: 505 DIMITKNDFMKALKETKPAFGAEEDIIGNLLCNGIINYGKEYENIENTCKLLIKQIVDNE 564
Query: 531 GSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDA 590
+ L++ LL G +GSGKT ++A ++F F K I+ E++IG E + I K+FEDA
Sbjct: 565 NTKLMSILLYGENGSGKTTISAYIAKCANFHFTKFITPENLIGYSEIGRINYINKIFEDA 624
Query: 591 YKSPXXXXXXXXXXXXXXYVPIGPRFSNIISQT-MXXXXXXXXXXXXXXXXIGTTSEVSF 649
YK+P Y IGPRFSN I Q M I TTSE F
Sbjct: 625 YKTPLSLVILDNIERLIDYTRIGPRFSNSILQAIMVLIKKKPKKENQKILIICTTSEYQF 684
Query: 650 LDSVGICDAFSVTYHVPTLKTDDA-KKVLKQLNV----FAEEDVDS--ASEALNDMPIKK 702
+ VG+ F V HVP L T + K VL+ N F +++ +S + ++ IK
Sbjct: 685 MKDVGLTKNFFVNIHVPLLSTSSSIKNVLQHRNQTYHDFPNNEIEKVISSNIIKNIAIKN 744
Query: 703 LYMLIEM 709
L M+I+M
Sbjct: 745 LLMIIDM 751
Score = 110 (43.8 bits), Expect = 1.7e-135, Sum P(2) = 1.7e-135
Identities = 39/148 (26%), Positives = 71/148 (47%)
Query: 13 TTMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQ 72
T + S +LALTN + + N + + + S G+ VL L ++ + +
Sbjct: 3 TNLQCCKLQSQELALTNCGFINIGLYNNLKKSVKSNDVYSEVGN-MVLILRGDGNIGREE 61
Query: 73 IALNSVQRRHAKVSTGDHVSLNRFIPPEDFN-----LALLTVELE---FVKKGSKNEQVD 124
IALN+ QR +++ + V +N + E+ N + + ++ELE FVK E D
Sbjct: 62 IALNTCQREFSRIQLKELVEIN-ILDKENKNDLVNFIPIDSIELEVNLFVKPDRLIEMED 120
Query: 125 AVLLANQLRKRFINQVMTAGQRVVFEYH 152
L + +K F+N ++T GQ + +Y+
Sbjct: 121 EKL-EDVFKKYFLNHILTKGQILALKYN 147
>FB|FBgn0000346 [details] [associations]
symbol:comt "comatose" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=ISS;NAS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=NAS] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0016082 "synaptic
vesicle priming" evidence=NAS] [GO:0007030 "Golgi organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0048172 "regulation of
short-term neuronal synaptic plasticity" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005737 GO:GO:0006911
GO:GO:0046872 GO:GO:0015031 EMBL:AE014298 GO:GO:0016887
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0007030 GO:GO:0048172 GO:GO:0016082 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 CTD:1312 EMBL:U09373
EMBL:BT010259 RefSeq:NP_524877.1 UniGene:Dm.1772
ProteinModelPortal:P46461 SMR:P46461 DIP:DIP-20666N IntAct:P46461
MINT:MINT-288692 STRING:P46461 PaxDb:P46461 PRIDE:P46461
EnsemblMetazoa:FBtr0073754 EnsemblMetazoa:FBtr0333329 GeneID:47091
KEGG:dme:Dmel_CG1618 FlyBase:FBgn0000346
GeneTree:ENSGT00530000064085 InParanoid:P46461 KO:K06027
OMA:HFIFALE OrthoDB:EOG4RFJ7K PhylomeDB:P46461 GenomeRNAi:47091
NextBio:838904 Bgee:P46461 GermOnline:CG1618 Uniprot:P46461
Length = 745
Score = 1321 (470.1 bits), Expect = 7.7e-135, P = 7.7e-135
Identities = 299/711 (42%), Positives = 425/711 (59%)
Query: 21 PSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIALNSVQR 80
P+ +L+LTN A + D + +++ + G F+ +L V G + + VQR
Sbjct: 11 PTDELSLTNRAIVNVGDFPE-EIKYADI--SPAPGQHFIFALEKTVEVPSGYVGFSLVQR 67
Query: 81 RHAKVSTGDHVSLN--RFIPPEDFNLALLTVELEFV-KKGSKNEQVDAVLLANQLRKRFI 137
+ A VS + + RF D + ++ E +F+ KK E D+ +A + +F
Sbjct: 68 KWAMVSINQELEVRPYRFDASSDV-ITCVSFETDFLQKKTVSQEPYDSDQMAKEFIMQFA 126
Query: 138 NQVMTAGQRVVFEYHGNNYI-FTVNGA-AVE----GQEKSNALER---GIITNETYFVFE 188
+T GQ +VF + + V A++ G+ K A+ G I T FE
Sbjct: 127 GMALTVGQSLVFNFKDKKLLGLAVKSLEAIDPKSLGEGKDTAMRNVRFGRILGNTVVQFE 186
Query: 189 ASNDSGIKIVNQREG--ANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVT 246
+ +S + + + +G +I + +++ +GIGGL EF IFRRAFASRVFPP +
Sbjct: 187 KAENSSLNLQGKSKGKVVRQSII-NPDWDFGKMGIGGLDKEFNSIFRRAFASRVFPPELV 245
Query: 247 SKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDL 306
+LG KHVKG+LLYGPPGTGKTLMARQIG MLN EPKIVNGP++L K+VGE+E N+R L
Sbjct: 246 EQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANVRRL 305
Query: 307 FADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLN 366
FA+AE +++ G S LH+IIFDEIDAICK RGS +GVHD++VNQLLTKIDGV+ LN
Sbjct: 306 FAEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDTVVNQLLTKIDGVDQLN 365
Query: 367 NVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVN 426
N+L+IGMTNR+DM+DEALLRPGRLEVQ+EISLP+E GR+QIL IHT +M+E + + DV+
Sbjct: 366 NILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVD 425
Query: 427 LQELAARTKNYSGAELEGVAKSAVSFALNRQLSMD-DLT-KPVDEESIKVTMDDFLHAL- 483
+E+AA TKN+SGAELEG+ ++A S A+NR + D +T P E +KV DDFLH+L
Sbjct: 426 NKEIAALTKNFSGAELEGLVRAAQSSAMNRLIKADAKVTVDPEAMEKLKVNRDDFLHSLE 485
Query: 484 YEIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPS 543
++I PAFG + + L+ G+++ G ++ + ML V+Q K + S LV+ L+ G
Sbjct: 486 HDIKPAFGTAQEILDNMLARGVINWGAPVSNLLEDGMLYVQQAKAPESSGLVSVLVAGAP 545
Query: 544 GSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXXXXXXXXX 603
SGKTALAA SDFPFVK+ S E M+G ES KC I K+F+DAY+S
Sbjct: 546 NSGKTALAAQLAKMSDFPFVKVCSPEDMVGYTESAKCLHIRKIFDDAYRSMLSCIVVDNV 605
Query: 604 XXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGICDAFSVTY 663
Y IGPR+SN+ Q + + T+S L+ + + AF+
Sbjct: 606 ERLLDYGSIGPRYSNMTLQALLVLLKKQPPKGRKLLILCTSSRREVLEEMEMLTAFTSVL 665
Query: 664 HVPTL-KTDDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
HVP L K D VL+ ++F++ ++ + + + + IKKL LI+M
Sbjct: 666 HVPNLSKPDHVLAVLENTDIFSKGEIQAIGKKMAGKRVFIGIKKLLGLIDM 716
>SGD|S000000284 [details] [associations]
symbol:SEC18 "ATPase required for vesicular transport between
ER and Golgi" species:4932 "Saccharomyces cerevisiae" [GO:0048280
"vesicle fusion with Golgi apparatus" evidence=IDA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IDA] [GO:0048219
"inter-Golgi cisterna vesicle-mediated transport" evidence=IMP]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=IMP] [GO:0048211 "Golgi vesicle docking" evidence=IDA]
[GO:0035494 "SNARE complex disassembly" evidence=IDA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0043332 "mating projection tip"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0000045 "autophagic
vacuole assembly" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000000284 Pfam:PF02359
GO:GO:0005524 GO:GO:0005737 GO:GO:0043332 GO:GO:0000045
EMBL:BK006936 GO:GO:0016887 KO:K09448 eggNOG:COG0464
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 EMBL:X76294
GO:GO:0043001 GO:GO:0048280 GO:GO:0042144 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 EMBL:AF004912
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 GO:GO:0048219 GO:GO:0035494 OrthoDB:EOG4PVS6W
EMBL:M20662 EMBL:Z35949 PIR:S45477 RefSeq:NP_009636.3
RefSeq:NP_009639.3 PDB:1CR5 PDBsum:1CR5 ProteinModelPortal:P18759
SMR:P18759 DIP:DIP-2497N IntAct:P18759 MINT:MINT-707733
STRING:P18759 PaxDb:P18759 PRIDE:P18759 EnsemblFungi:YBR080C
GeneID:852372 GeneID:852377 KEGG:sce:YBR080C KEGG:sce:YBR083W
CYGD:YBR080c EvolutionaryTrace:P18759 NextBio:971158
Genevestigator:P18759 GermOnline:YBR080C GO:GO:0048211
Uniprot:P18759
Length = 758
Score = 1307 (465.1 bits), Expect = 2.3e-133, P = 2.3e-133
Identities = 297/685 (43%), Positives = 403/685 (58%)
Query: 15 MNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIA 74
+ V N P+ AL N+A SP D PN N+++ + + FV + + G I
Sbjct: 29 LKVSNCPNNSYALANVAAVSPNDF-----PN-NIYI--IIDNLFVFTTRHSNDIPPGTIG 80
Query: 75 LNSVQRRHAKVSTGDHVSLNRF----IPPEDFNLALLTVELEFVKKGSKNEQV-DAVLLA 129
N QR S V F + L + +++ F +G V D LA
Sbjct: 81 FNGNQRTWGGWSLNQDVQAKAFDLFKYSGKQSYLGSIDIDISFRARGKAVSTVFDQDELA 140
Query: 130 NQLRKRFINQVMTAGQRVVFEYHGNNYIFTV-NGAAVE-GQ-EKSNALE-----RGIITN 181
Q + + +Q+ + Q ++ E+ G+ + + N A++ G E ++A+ +GI+T
Sbjct: 141 KQFVRCYESQIFSPTQYLIMEFQGHFFDLKIRNVQAIDLGDIEPTSAVATGIETKGILTK 200
Query: 182 ETYFVFEASNDSGIKIVNQRE-GANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRV 240
+T F D + + + SN +F + LG+GGL EF IFRRAFASR+
Sbjct: 201 QTQINFFKGRDGLVNLKSSNSLRPRSNAVIRPDFKFEDLGVGGLDKEFTKIFRRAFASRI 260
Query: 241 FPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETE 300
FPP V KLGI HVKG+LLYGPPGTGKTL+AR+IG MLN EPKIVNGPE+LSK+VG +E
Sbjct: 261 FPPSVIEKLGISHVKGLLLYGPPGTGKTLIARKIGTMLNAKEPKIVNGPEILSKYVGSSE 320
Query: 301 KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
+NIR+LF DAE + R +G++S LH+IIFDE+D++ K RGS DGTGV D++VNQLL K+D
Sbjct: 321 ENIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGTGVGDNVVNQLLAKMD 380
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
GV+ LNN+L+IGMTNRKD++D ALLRPGR EVQVEI LPDE GRLQI I T KM+EN+
Sbjct: 381 GVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNM 440
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDD-LTK--PVDEESIKVTMD 477
++ DVNL ELAA TKN+SGAE+EG+ KSA SFA+N+ +++ TK D +KVT +
Sbjct: 441 MSDDVNLAELAALTKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLNTKDIAKLKVTRE 500
Query: 478 DFLHALYEIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTC 537
DFL+AL ++ PAFG S +DL+ GM+ +R I + V QV+ S S LV+
Sbjct: 501 DFLNALNDVTPAFGISEEDLKTCVEGGMMLYSERVNSILKNGARYVRQVRESDKSRLVSL 560
Query: 538 LLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXXX 597
L+ GP+GSGKTALAA + S FPF+++IS + G+ ES K A I F DAYKSP
Sbjct: 561 LIHGPAGSGKTALAAEIALKSGFPFIRLISPNELSGMSESAKIAYIDNTFRDAYKSPLNI 620
Query: 598 XXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGICD 657
+VPIGPRFSN I Q + + TTS S L + I
Sbjct: 621 LVIDSLETLVDWVPIGPRFSNNILQMLKVALKRKPPQDRRLLIMTTTSAYSVLQQMDILS 680
Query: 658 AFSVTYHVPTLKT-DDAKKVLKQLN 681
F VP + D+ V+ + N
Sbjct: 681 CFDNEIAVPNMTNLDELNNVMIESN 705
>UNIPROTKB|G4MRG5 [details] [associations]
symbol:MGG_02418 "Vesicular-fusion protein SEC18"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:CM001231 KO:K06027 RefSeq:XP_003709204.1
ProteinModelPortal:G4MRG5 EnsemblFungi:MGG_02418T0 GeneID:2681515
KEGG:mgr:MGG_02418 Uniprot:G4MRG5
Length = 835
Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
Identities = 298/683 (43%), Positives = 404/683 (59%)
Query: 28 TNLAYCSPADLLNFRVPNSNLFLAS--VAGDSFVLSLASHPSVNKGQIALNSVQRRHAKV 85
TN+ SP+D + R + + L + GD V++ + P G I+L+ QR +V
Sbjct: 100 TNICAVSPSDFPSSRDGDHYIRLTGPQLRGDYVVMARPT-PGFPPGCISLSDPQRTWLQV 158
Query: 86 STGDHVSLNRFIPPEDFN--LALLTVELEFVKKGSKNEQV-DAVLLANQLRKRFINQVMT 142
D + + P L + VE+ F K E+ D L + F NQ+
Sbjct: 159 GLMDELEGELYDPLGGGTPYLGAIDVEVGFASKAKFAEEAYDQDELQRMMVSTFANQMFA 218
Query: 143 AGQRVVFEYHGNNY---IFTVNGAAVEGQEK---------SNALERGIITNETYFVFEAS 190
GQR++ + I TV + EK S+ +RG++TN+T F
Sbjct: 219 PGQRILMDVRSIPLAIQIKTVTLVDLSMSEKPAGDAAMTSSDPNKRGVLTNQTGVTFFKD 278
Query: 191 NDSGIKIVNQREGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLG 250
+ IK+ A SN +F + +GIGGL EFA IFRRAFASR+FPP + KLG
Sbjct: 279 PKTSIKLKASSRKAASNAIVSPDFKFEDMGIGGLDNEFATIFRRAFASRIFPPELIEKLG 338
Query: 251 IKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADA 310
I+HVKG+LL+GPPGTGKTL+ARQIGKMLN EPKI+NGPEVL+K+VG++E+NIR +FADA
Sbjct: 339 IQHVKGILLFGPPGTGKTLIARQIGKMLNAREPKIINGPEVLNKYVGQSEENIRKMFADA 398
Query: 311 ENDQRTRGDQSDLHVIIFDEIDAICKSRGS-TRDGTGVHDSIVNQLLTKIDGVESLNNVL 369
E + +GD+S LH+IIFDE+DA+CK RGS + GTGV DS+VNQLL+K+DGV LNN+L
Sbjct: 399 EKEYAEKGDESGLHIIIFDELDAVCKQRGSGSGGGTGVGDSVVNQLLSKLDGVNQLNNIL 458
Query: 370 LIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQE 429
LIGMTNRKDM+D+ALLRPGRLEVQVEISLPDE GR +ILQIHT KM +N+ + DV+L+E
Sbjct: 459 LIGMTNRKDMIDDALLRPGRLEVQVEISLPDEPGREKILQIHTTKMVKNNVIESDVDLRE 518
Query: 430 LAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEES-IKVTMDDFLHALYEIVP 488
LAA TKN+SGAE+ G+ K+A SFA NR + + D + +KV DDFLHAL E+ P
Sbjct: 519 LAAMTKNFSGAEISGLVKAATSFAFNRHTKVGTMAGVSDNVAEMKVNRDDFLHALGEVKP 578
Query: 489 AFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKT 548
AFG D L +G++ I + M+ V+ V+ + L++ LL GP GSGKT
Sbjct: 579 AFGMDEDKLGAVIRHGIIHFSPAIDSILRDGMINVDAVRDLEQLNLLSVLLHGPEGSGKT 638
Query: 549 ALAATAGIDSDFPFVKIISAESMIGLHEST-KCAQIVKVFEDAYKSPXXXXXXXXXXXXX 607
A+AA I S FPFVK I+AE ++G + K I KVF DAYKSP
Sbjct: 639 AMAAHIAIQSGFPFVKTITAEMLVGCRDEVGKKDMIHKVFTDAYKSPLSLLILDDIEEMI 698
Query: 608 XYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGICDAFSVTYHVPT 667
+ PIGPR SN++ Q + + TTS S L + + AF+ +P
Sbjct: 699 EWNPIGPRMSNMMVQVLRTLMKALPPKGHRLLILATTSVRSVLQQLDMMKAFNAEIAIPA 758
Query: 668 LKT-DDAKKVLKQLNVFAEEDVD 689
+K + +VL + +F +D++
Sbjct: 759 IKNLQELSRVLGESAMFESQDLN 781
>WB|WBGene00003818 [details] [associations]
symbol:nsf-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0071688 "striated muscle
myosin thick filament assembly" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0002119 GO:GO:0032940 GO:GO:0046872
GO:GO:0015031 GO:GO:0071688 GO:GO:0000003 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 EMBL:Z96100 EMBL:Z79698 PIR:T23096
RefSeq:NP_001076603.1 ProteinModelPortal:Q94392 SMR:Q94392
DIP:DIP-24326N IntAct:Q94392 MINT:MINT-212260 STRING:Q94392
PaxDb:Q94392 PRIDE:Q94392 EnsemblMetazoa:H15N14.2a GeneID:266842
KEGG:cel:CELE_H15N14.2 UCSC:H15N14.2a CTD:266842 WormBase:H15N14.2a
InParanoid:Q94392 NextBio:953236 ArrayExpress:Q94392 Uniprot:Q94392
Length = 824
Score = 1195 (425.7 bits), Expect = 4.2e-130, Sum P(2) = 4.2e-130
Identities = 245/531 (46%), Positives = 338/531 (63%)
Query: 170 KSNALERGIITNETYFVFEASNDSGIKIVNQREGANS-NIFRHKEFNLQSLGIGGLSAEF 228
K +E G + + VF+ S + ++ + +G ++ + +++ Q +GIGGL EF
Sbjct: 245 KPKQIEAGELLPNSVIVFDKEEGSMLNLIGKSKGKSAYRSIINPDWDFQQMGIGGLDTEF 304
Query: 229 ADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNG 288
+ IFRRAFASRVFPP +LG+KHV+G+LL+GPPGTGKTLMARQIGKMLN EPKIVNG
Sbjct: 305 SHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNG 364
Query: 289 PEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVH 348
P++L K+VGE+E N+R LFADAE + R G S LH+IIFDEIDAICK RGS + VH
Sbjct: 365 PQILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVH 424
Query: 349 DSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQIL 408
D++VNQLL+K+DGVE LNN+L+IGMTNR+DM+DEALLRPGRLEVQ+E+SLPDE GRLQIL
Sbjct: 425 DTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQIL 484
Query: 409 QIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTK--P 466
+IHT +M+E + + P+V+L++++ RTKN+SGAELEG+ ++A S A+NR + + P
Sbjct: 485 KIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNRLVKAGGKAQADP 544
Query: 467 VDEESIKVTMDDFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQ 525
E + + DF +AL +I PAFG S + L R GM+ G I LL
Sbjct: 545 DAIEKLAINSGDFDYALENDIKPAFGRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAAT 604
Query: 526 VKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVK 585
VK + S T +L G + +GKT+LAA SDFPFVK+IS E +G ES KC + K
Sbjct: 605 VKNPENSGFRTVVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGFSESAKCMALKK 664
Query: 586 VFEDAYKSPXXXXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTS 645
FEDA +S Y P+GPR+SN++ Q + I T+S
Sbjct: 665 AFEDAKRSKLSVLLIDNLERLIDYHPVGPRYSNLVIQALLVLLNAPPPAGHRLFVIATSS 724
Query: 646 EVSFLDSVGICDAFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEAL 695
+ FL +G+ D F +P L T V+++ N+++++ + + L
Sbjct: 725 DRMFLRDMGLMDVFGDVIDIPKLTTAGQMMNVIQESNIYSDDQLPMIEQKL 775
Score = 102 (41.0 bits), Expect = 4.2e-130, Sum P(2) = 4.2e-130
Identities = 31/145 (21%), Positives = 65/145 (44%)
Query: 8 QSSGVTTMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPS 67
Q+S V PS + L N AY + +D + ++ ++ + ++ S+ + S
Sbjct: 61 QTSNEKMFRVRKAPSEEHTLANYAYVNRSDFDDKQI--KHVRVNPGPAHHYIFSIRNDGS 118
Query: 68 VNKGQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEF-VKKGSKNEQVDAV 126
+ G+IA R+ A +S V + F + + + + +F KK +E ++A
Sbjct: 119 IKPGEIAFGVPHRKWAALSLDQEVRVTPFTFQQSEYVGSMILTADFNAKKNVTSEPLNAD 178
Query: 127 LLANQLRKRFINQVMTAGQRVVFEY 151
L+A + +F Q + G ++ F +
Sbjct: 179 LMAREFSIQFGGQAFSKGMQMAFRF 203
>UNIPROTKB|Q94392 [details] [associations]
symbol:nsf-1 "Vesicle-fusing ATPase" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0009792
GO:GO:0006898 GO:GO:0005737 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0032940 GO:GO:0046872 GO:GO:0015031
GO:GO:0071688 GO:GO:0000003 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 EMBL:Z96100 EMBL:Z79698 PIR:T23096
RefSeq:NP_001076603.1 ProteinModelPortal:Q94392 SMR:Q94392
DIP:DIP-24326N IntAct:Q94392 MINT:MINT-212260 STRING:Q94392
PaxDb:Q94392 PRIDE:Q94392 EnsemblMetazoa:H15N14.2a GeneID:266842
KEGG:cel:CELE_H15N14.2 UCSC:H15N14.2a CTD:266842 WormBase:H15N14.2a
InParanoid:Q94392 NextBio:953236 ArrayExpress:Q94392 Uniprot:Q94392
Length = 824
Score = 1195 (425.7 bits), Expect = 4.2e-130, Sum P(2) = 4.2e-130
Identities = 245/531 (46%), Positives = 338/531 (63%)
Query: 170 KSNALERGIITNETYFVFEASNDSGIKIVNQREGANS-NIFRHKEFNLQSLGIGGLSAEF 228
K +E G + + VF+ S + ++ + +G ++ + +++ Q +GIGGL EF
Sbjct: 245 KPKQIEAGELLPNSVIVFDKEEGSMLNLIGKSKGKSAYRSIINPDWDFQQMGIGGLDTEF 304
Query: 229 ADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNG 288
+ IFRRAFASRVFPP +LG+KHV+G+LL+GPPGTGKTLMARQIGKMLN EPKIVNG
Sbjct: 305 SHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNG 364
Query: 289 PEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVH 348
P++L K+VGE+E N+R LFADAE + R G S LH+IIFDEIDAICK RGS + VH
Sbjct: 365 PQILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVH 424
Query: 349 DSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQIL 408
D++VNQLL+K+DGVE LNN+L+IGMTNR+DM+DEALLRPGRLEVQ+E+SLPDE GRLQIL
Sbjct: 425 DTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQIL 484
Query: 409 QIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTK--P 466
+IHT +M+E + + P+V+L++++ RTKN+SGAELEG+ ++A S A+NR + + P
Sbjct: 485 KIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNRLVKAGGKAQADP 544
Query: 467 VDEESIKVTMDDFLHALY-EIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQ 525
E + + DF +AL +I PAFG S + L R GM+ G I LL
Sbjct: 545 DAIEKLAINSGDFDYALENDIKPAFGRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAAT 604
Query: 526 VKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVK 585
VK + S T +L G + +GKT+LAA SDFPFVK+IS E +G ES KC + K
Sbjct: 605 VKNPENSGFRTVVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGFSESAKCMALKK 664
Query: 586 VFEDAYKSPXXXXXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTS 645
FEDA +S Y P+GPR+SN++ Q + I T+S
Sbjct: 665 AFEDAKRSKLSVLLIDNLERLIDYHPVGPRYSNLVIQALLVLLNAPPPAGHRLFVIATSS 724
Query: 646 EVSFLDSVGICDAFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEAL 695
+ FL +G+ D F +P L T V+++ N+++++ + + L
Sbjct: 725 DRMFLRDMGLMDVFGDVIDIPKLTTAGQMMNVIQESNIYSDDQLPMIEQKL 775
Score = 102 (41.0 bits), Expect = 4.2e-130, Sum P(2) = 4.2e-130
Identities = 31/145 (21%), Positives = 65/145 (44%)
Query: 8 QSSGVTTMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPS 67
Q+S V PS + L N AY + +D + ++ ++ + ++ S+ + S
Sbjct: 61 QTSNEKMFRVRKAPSEEHTLANYAYVNRSDFDDKQI--KHVRVNPGPAHHYIFSIRNDGS 118
Query: 68 VNKGQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEF-VKKGSKNEQVDAV 126
+ G+IA R+ A +S V + F + + + + +F KK +E ++A
Sbjct: 119 IKPGEIAFGVPHRKWAALSLDQEVRVTPFTFQQSEYVGSMILTADFNAKKNVTSEPLNAD 178
Query: 127 LLANQLRKRFINQVMTAGQRVVFEY 151
L+A + +F Q + G ++ F +
Sbjct: 179 LMAREFSIQFGGQAFSKGMQMAFRF 203
>UNIPROTKB|I3LTE8 [details] [associations]
symbol:I3LTE8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
Ensembl:ENSSSCT00000026497 OMA:QEMEMLT Uniprot:I3LTE8
Length = 751
Score = 1215 (432.8 bits), Expect = 1.3e-123, P = 1.3e-123
Identities = 272/717 (37%), Positives = 422/717 (58%)
Query: 14 TMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQI 73
+M P+ +L+L+N A + D + ++ + + + +L +HPSV G I
Sbjct: 5 SMQAARCPTDELSLSNCAVVNEKDFQS----GQHVVVRTSPNHRYTFTLRTHPSVVPGSI 60
Query: 74 ALNSVQRRHAKVSTGDHVSLNRFIPPEDFN-LALLTVELEFVKKGS-KNEQVDAVLLANQ 131
A + QR+ A +S G + ++ + + + +T+E++F++K S + D +A +
Sbjct: 61 AFSLPQRKWAGLSIGQEIEVSSYTFDKAKQCIGTMTMEIDFLQKKSIDSNPYDTDKMAAE 120
Query: 132 LRKRFINQVMTAGQRVVFEYHGNNY------IFTVNGAAVEGQE---KSNALERGIITNE 182
++F NQ + Q++VF ++ + I ++ + ++G+ K +E G++
Sbjct: 121 FIQQFNNQAFSVAQQLVFSFNEKLFGLLVKDIEAMDPSILKGEPGTGKRQKIEVGLVVGN 180
Query: 183 TYFVFEASNDSGIKIVNQ-REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVF 241
+ FE + +S + ++ + + N + ++N + +GIGGL EF+DIFRRAFASRVF
Sbjct: 181 SQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVF 240
Query: 242 PPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEK 301
PP + ++G K +LLY PP K+ + ++ K +N +P++V P++L+K++ E +
Sbjct: 241 PPEIVEQMG--EFKNVLLYYPPFCWKSSVGVRLWKAMNQEQPQVVMAPDLLNKYIYEEDS 298
Query: 302 N-IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
N R FAD E ++R G S LH+IIFDEIDAICK RGS TGVHD++VNQLL+KID
Sbjct: 299 NNFRKNFADGEEERRKLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKID 358
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
GVE LNN+L+IGMTNR D++DEALLRPGRLEV++EI LPDE GRLQIL IHT +M+ +
Sbjct: 359 GVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQL 418
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDD-LTKPVDE-ESIKVTMDD 478
L+ DV+++ELA TKN+SGAELEG+ ++A S A+NR + +T+ + + +K+
Sbjct: 419 LSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKEPPYVTQHFESLQCVKIKYGI 478
Query: 479 FLHALYE-IVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTC 537
+ L + I AFG + +D +NG++ GD + + LLV+Q K S +PLV+
Sbjct: 479 YSKGLGDKIKKAFGTNQEDYASYIMNGIIKWGDPVTRVLEDGELLVQQTKNSDRTPLVSV 538
Query: 538 LLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPXXX 597
LLEGP SGKTALAA +S+FPF+KI S + MIG E+ KC + K+F+DAYKS
Sbjct: 539 LLEGPPHSGKTALAARIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSC 598
Query: 598 XXXXXXXXXXXYVPIGPRFSNIISQTMXXXXXXXXXXXXXXXXIGTTSEVSFLDSVGICD 657
YVPIGPRFSN++ Q + IGTTS L + + +
Sbjct: 599 VVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLN 658
Query: 658 AFSVTYHVPTLKT-DDAKKVLKQLNVFAEEDVDSASEALND----MPIKKLYMLIEM 709
AFS T HVP + T + + L+ L F +++ + ++ + + IKKL MLIEM
Sbjct: 659 AFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEM 715
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 485 (175.8 bits), Expect = 7.0e-44, Sum P(2) = 7.0e-44
Identities = 133/390 (34%), Positives = 205/390 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E N+ +G IGG + A I R + P + +GIK +G+L+YGPPGTGKT
Sbjct: 204 EENNMNEVGYDDIGGCRKQMAQI-REMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKT 262
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
LMAR + G ++NGPEV+SK GE+E N+R F +AE + +I
Sbjct: 263 LMARAVANE-TGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPA--------IIFI 313
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DEID+I R T +G V +V+QLLT +DG+++ +NV++I TNR + +D AL R G
Sbjct: 314 DEIDSIAPKRDKT-NGE-VERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFG 371
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL++L+IHT MK LA DV+L+ LAA T Y GA++ +
Sbjct: 372 RFDREVDIGIPDATGRLEVLRIHTKNMK----LADDVDLEALAAETHGYVGADIASLCSE 427
Query: 449 AVSFALNRQLSMDDLTKP-VDEE---SIKVTMDDFLHALYEIVPAFGASTD----DLERS 500
A + ++ + DL + +D E S+ VTMD+F AL P+ T ++
Sbjct: 428 AAMQQIREKMDLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVESVNVTWD 487
Query: 501 RLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ G+ + + K + +L +Q SP L GP G+GKT LA +
Sbjct: 488 DVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSA 547
Query: 561 PFVKIISAESMIGLHESTKCAQIVKVFEDA 590
F+ + E ++ + + I +F+ A
Sbjct: 548 NFISVKGPE-LLSMWYGESESNIRDIFDKA 576
Score = 421 (153.3 bits), Expect = 7.1e-36, Sum P(2) = 7.1e-36
Identities = 109/298 (36%), Positives = 161/298 (54%)
Query: 188 EASNDSGIKIVNQREG-ANSNIFRHKEFNLQSLGI-----GGLSAEFADIFRRAFASRVF 241
E + G+ + N R NSN +E ++S+ + GGL E + + V
Sbjct: 450 EVLDSLGVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLD-EIKEELKETVEYPVL 508
Query: 242 PPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEK 301
P +K G+ KG+L YGPPGTGKTL+A+ + ++ V GPE+LS + GE+E
Sbjct: 509 HPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFIS-VKGPELLSMWYGESES 567
Query: 302 NIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG-STRDGTGVHDSIVNQLLTKID 360
NIRD+F A T V+ DE+D+I K+RG S D G D +VNQLLT++D
Sbjct: 568 NIRDIFDKARAAAPT--------VVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMD 619
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
G+ + NV +IG TNR D +D A+LRPGRL+ + + LPDEN RL IL K
Sbjct: 620 GMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTP---- 675
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDD 478
L P + L +A T+ +SGA+L + + A +A+ S++ + E+ +KV +D
Sbjct: 676 LEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKD--SIEAHRQHEAEKEVKVEGED 731
Score = 39 (18.8 bits), Expect = 7.0e-44, Sum P(2) = 7.0e-44
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 59 VLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLN 94
VL + + G +N V R + ++ GD V+++
Sbjct: 78 VLIVLIDDELEDGACRINRVVRNNLRIRLGDLVTIH 113
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 478 (173.3 bits), Expect = 7.4e-44, Sum P(2) = 7.4e-44
Identities = 129/390 (33%), Positives = 206/390 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I R + P + +GIK +G+L+YGPPGTGKT
Sbjct: 214 EESSLAEVGYDDIGGCRRQMAQI-RELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKT 272
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
LMAR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 273 LMARAVANE-TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPA--------IIFI 323
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DEID+I R T +G V +V+QLLT +DG+++ +NV+++ TNR + +D AL R G
Sbjct: 324 DEIDSIAPKREKT-NGE-VERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFG 381
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V++ +PD GRL+IL+IHT MK LA DV+L+++AA T Y G++L +
Sbjct: 382 RFDREVDVGIPDPTGRLEILRIHTKNMK----LADDVDLEQIAAETHGYVGSDLASLCSE 437
Query: 449 AVSFALNRQLSMDDLTKP-VDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSR-- 501
A + ++ M DL + +D E S+ VTMD+F AL P A + ++ R
Sbjct: 438 AAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNFRFALGSSNPSALRETVVEVPNVRWE 497
Query: 502 -LNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ G+ + + Q ++ E+ +P L GP G+GKT LA +
Sbjct: 498 DIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSA 557
Query: 561 PFVKIISAESMIGLHESTKCAQIVKVFEDA 590
F+ + E ++ + + + +F+ A
Sbjct: 558 NFISVKGPE-LLSMWFGESESNVRDIFDKA 586
Score = 406 (148.0 bits), Expect = 5.1e-35, Sum P(2) = 5.1e-35
Identities = 101/264 (38%), Positives = 149/264 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N++ IGGL E R V + G+ KG+L +GPPGTGKTL+A+ I
Sbjct: 493 NVRWEDIGGLE-EVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAI 551
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
+ V GPE+LS + GE+E N+RD+F A R V+ DE+D+I
Sbjct: 552 ANECSANFIS-VKGPELLSMWFGESESNVRDIFDKA----RAAAPC----VVFLDELDSI 602
Query: 335 CKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQV 394
K+RG++ +G D +VNQLLT++DGV S NV +IG TNR D +D AL+RPGRL+ +
Sbjct: 603 AKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLI 662
Query: 395 EISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFAL 454
+ LPDE R ILQ +++ +A DV+L+ +A T +SGA+LE V + AV A+
Sbjct: 663 YVPLPDEEARFSILQ---TQLRHTP-VAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAI 718
Query: 455 NRQLSMDDLTKPVDEESIKVTMDD 478
+ +D+ + + E+ + DD
Sbjct: 719 KDSIE-EDIKR--ENETGEAPADD 739
Score = 47 (21.6 bits), Expect = 7.4e-44, Sum P(2) = 7.4e-44
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 59 VLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLN 94
VL + + + G +N V R + +V GD V++N
Sbjct: 88 VLIVLTDEEMEDGVARINRVVRNNLRVRLGDIVTIN 123
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 470 (170.5 bits), Expect = 4.2e-42, P = 4.2e-42
Identities = 128/390 (32%), Positives = 206/390 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I R + P + +GIK KG+L+YGPPGTGKT
Sbjct: 205 EENSLNEVGYDDIGGCKKQMAQI-RELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKT 263
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
+MAR + G ++NGPE++SK GE+E N+R F +AE + + +I
Sbjct: 264 IMARAVANE-TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPS--------IIFI 314
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DEID+I R T +G V +V+QLLT +DG+++ +NV++I TNR + +D AL R G
Sbjct: 315 DEIDSIAPKRDKT-NGE-VERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFG 372
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+IL+IHT MK LA DV+L+ +A+ T + GA++ +
Sbjct: 373 RFDREVDIGVPDAEGRLEILRIHTKNMK----LADDVDLEAIASETHGFVGADIASLCSE 428
Query: 449 AVSFALNRQLSMDDLTKP-VDEE---SIKVTMDDFLHALYEIVPAFGASTD----DLERS 500
A + ++ + DL + +D E S+ VT D+F AL P+ T ++
Sbjct: 429 AAMQQIREKMDLIDLEEETIDTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWD 488
Query: 501 RLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ G+ + + K + +L +Q + +P L GP G+GKT LA +
Sbjct: 489 DIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSA 548
Query: 561 PFVKIISAESMIGLHESTKCAQIVKVFEDA 590
F+ + E ++ + + I +F+ A
Sbjct: 549 NFISVKGPE-LLSMWYGESESNIRDIFDKA 577
Score = 427 (155.4 bits), Expect = 3.8e-37, P = 3.8e-37
Identities = 109/298 (36%), Positives = 157/298 (52%)
Query: 188 EASNDSGIKIVNQREG-ANSNIFRHKEFNLQSLG-----IGGLSAEFADIFRRAFASRVF 241
E N G+ N R NSN +E ++++ IGGL + + V
Sbjct: 451 EVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLD-NIKNELKETVEYPVL 509
Query: 242 PPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEK 301
P K G+ KG+L +GPPGTGKTL+A+ + ++ V GPE+LS + GE+E
Sbjct: 510 HPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFIS-VKGPELLSMWYGESES 568
Query: 302 NIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTR-DGTGVHDSIVNQLLTKID 360
NIRD+F A T V+ DE+D+I K+RG + D G D +VNQLLT++D
Sbjct: 569 NIRDIFDKARAAAPT--------VVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMD 620
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
G+ + NV +IG TNR D +D ALLRPGRL+ + + LPDE RL ILQ N+
Sbjct: 621 GMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLR----NTP 676
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDD 478
L P ++L E+A T +SGA+L + + + FA+ + + EE KV +D
Sbjct: 677 LEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKVKTED 734
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 470 (170.5 bits), Expect = 4.2e-42, P = 4.2e-42
Identities = 128/390 (32%), Positives = 206/390 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I R + P + +GIK KG+L+YGPPGTGKT
Sbjct: 205 EENSLNEVGYDDIGGCKKQMAQI-RELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKT 263
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
+MAR + G ++NGPE++SK GE+E N+R F +AE + + +I
Sbjct: 264 IMARAVANE-TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPS--------IIFI 314
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DEID+I R T +G V +V+QLLT +DG+++ +NV++I TNR + +D AL R G
Sbjct: 315 DEIDSIAPKRDKT-NGE-VERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFG 372
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+IL+IHT MK LA DV+L+ +A+ T + GA++ +
Sbjct: 373 RFDREVDIGVPDAEGRLEILRIHTKNMK----LADDVDLEAIASETHGFVGADIASLCSE 428
Query: 449 AVSFALNRQLSMDDLTKP-VDEE---SIKVTMDDFLHALYEIVPAFGASTD----DLERS 500
A + ++ + DL + +D E S+ VT D+F AL P+ T ++
Sbjct: 429 AAMQQIREKMDLIDLEEETIDTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWD 488
Query: 501 RLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ G+ + + K + +L +Q + +P L GP G+GKT LA +
Sbjct: 489 DIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSA 548
Query: 561 PFVKIISAESMIGLHESTKCAQIVKVFEDA 590
F+ + E ++ + + I +F+ A
Sbjct: 549 NFISVKGPE-LLSMWYGESESNIRDIFDKA 577
Score = 427 (155.4 bits), Expect = 3.8e-37, P = 3.8e-37
Identities = 109/298 (36%), Positives = 157/298 (52%)
Query: 188 EASNDSGIKIVNQREG-ANSNIFRHKEFNLQSLG-----IGGLSAEFADIFRRAFASRVF 241
E N G+ N R NSN +E ++++ IGGL + + V
Sbjct: 451 EVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLD-NIKNELKETVEYPVL 509
Query: 242 PPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEK 301
P K G+ KG+L +GPPGTGKTL+A+ + ++ V GPE+LS + GE+E
Sbjct: 510 HPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFIS-VKGPELLSMWYGESES 568
Query: 302 NIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTR-DGTGVHDSIVNQLLTKID 360
NIRD+F A T V+ DE+D+I K+RG + D G D +VNQLLT++D
Sbjct: 569 NIRDIFDKARAAAPT--------VVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMD 620
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
G+ + NV +IG TNR D +D ALLRPGRL+ + + LPDE RL ILQ N+
Sbjct: 621 GMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLR----NTP 676
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDD 478
L P ++L E+A T +SGA+L + + + FA+ + + EE KV +D
Sbjct: 677 LEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKVKTED 734
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 466 (169.1 bits), Expect = 8.2e-42, Sum P(2) = 8.2e-42
Identities = 135/391 (34%), Positives = 206/391 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG+ + A I + + P + +G+K +G+LLYGPPGTGKT
Sbjct: 194 EEESLNEVGYDDIGGVRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 252
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 253 LIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA--------IIFI 303
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DE+DAI R T G V IV+QLLT +DG++ +V+++ TNR + +D AL R G
Sbjct: 304 DELDAIAPKREKTH-GE-VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+ILQIHT MK LA DV+L+++A T + GA+L +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMK----LADDVDLEQVANETHGHVGADLAALCSE 417
Query: 449 AVSFALNRQLSMDDLT-KPVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSRLN 503
A A+ +++ + DL + +D E S+ VTMDDF AL + P A + ++
Sbjct: 418 AALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWE 477
Query: 504 GMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ D + + + VE K K G +P L GP G GKT LA +
Sbjct: 478 DIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 537
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + ++F+ A
Sbjct: 538 NFISIKGPELLTMWFGESE--ANVREIFDKA 566
Score = 394 (143.8 bits), Expect = 4.0e-33, Sum P(2) = 4.0e-33
Identities = 98/265 (36%), Positives = 148/265 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFP---PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKM 277
IGGL D+ R +P P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 479 IGGLD----DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 278 LNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS 337
I GPE+L+ + GE+E N+R++F A Q+ V+ FDE+D+I K+
Sbjct: 535 CQANFISI-KGPELLTMWFGESEANVREIFDKAR--------QAAPCVLFFDELDSIAKA 585
Query: 338 RG-STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
RG + DG G D ++NQ+LT++DG+ S NV +IG TNR D++D A+LRPGRL+ + I
Sbjct: 586 RGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LPDE R+ IL+ + K S ++ DV+L LA T +SGA+L + + A A+
Sbjct: 646 PLPDEKSRIAILKANLRK----SPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 701
Query: 457 QLSMD---DLTKPVDEESIKVTMDD 478
+ + + + + +++V DD
Sbjct: 702 SIENEIRRERERQTNPSAMEVEEDD 726
Score = 42 (19.8 bits), Expect = 8.2e-42, Sum P(2) = 8.2e-42
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 24 DLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIALNSVQRRHA 83
D ++ +L+ +L FR + L V + S + + ++ +N V R +
Sbjct: 35 DNSVVSLSQAKMDELQLFR--GDTVLLKGKKRRETVCIVLSDDTCSDEKVRMNRVVRNNL 92
Query: 84 KVSTGDHVSL 93
+V GD +S+
Sbjct: 93 RVRLGDVISI 102
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 462 (167.7 bits), Expect = 9.8e-42, Sum P(2) = 9.8e-42
Identities = 134/391 (34%), Positives = 206/391 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I + + P + +G+K +G+LLYGPPGTGKT
Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 252
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 253 LIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA--------IIFI 303
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DE+DAI R T G V IV+QLLT +DG++ +V+++ TNR + +D AL R G
Sbjct: 304 DELDAIAPKREKTH-GE-VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+ILQIHT MK L+ DV+L+++A T + GA+L +
Sbjct: 362 RFDREVDIGIPDSTGRLEILQIHTKNMK----LSDDVDLEQVANETHGHVGADLAALCSE 417
Query: 449 AVSFALNRQLSMDDLT-KPVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSRLN 503
A A+ +++ + DL + +D E S+ VTMDDF AL + P A + ++ +
Sbjct: 418 AALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWE 477
Query: 504 GMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ D + + + VE K K G +P L GP G GKT LA +
Sbjct: 478 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 537
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + ++F+ A
Sbjct: 538 NFISIKGPELLTMWFGESE--ANVREIFDKA 566
Score = 386 (140.9 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 96/261 (36%), Positives = 145/261 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFP---PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKM 277
IGGL D+ R +P P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 479 IGGLE----DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 278 LNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS 337
I GPE+L+ + GE+E N+R++F A Q+ V+ FDE+D+I K+
Sbjct: 535 CQANFISI-KGPELLTMWFGESEANVREIFDKAR--------QAAPCVLFFDELDSIAKA 585
Query: 338 RGST-RDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
RG DG G D ++NQ+LT++DG+ NV +IG TNR D++D A+LRPGRL+ + I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LPDE R+ IL+ + K S +A DV++ LA T +SGA+L + + A A+
Sbjct: 646 PLPDEKSRMAILKANLRK----SPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRE 701
Query: 457 QLSMDDLTKPVDEESIKVTMD 477
+ +++ + D ++ M+
Sbjct: 702 SIE-NEIRRERDRQTNPSAME 721
Score = 46 (21.3 bits), Expect = 9.8e-42, Sum P(2) = 9.8e-42
Identities = 19/86 (22%), Positives = 37/86 (43%)
Query: 8 QSSGVTTMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPS 67
Q S + V + + D ++ +L+ +L FR + L V + S +
Sbjct: 19 QKSRPNRLIVDESINEDNSMVSLSQAKMDELQLFR--GDTVLLKGKKRREAVCIVLSDDT 76
Query: 68 VNKGQIALNSVQRRHAKVSTGDHVSL 93
+ +I +N V R + +V GD +S+
Sbjct: 77 CSDEKIRMNRVVRNNLRVRLGDVISI 102
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 462 (167.7 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 134/391 (34%), Positives = 206/391 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I + + P + +G+K +G+LLYGPPGTGKT
Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 252
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 253 LIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA--------IIFI 303
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DE+DAI R T G V IV+QLLT +DG++ +V+++ TNR + +D AL R G
Sbjct: 304 DELDAIAPKREKTH-GE-VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+ILQIHT MK L+ DV+L+++A T + GA+L +
Sbjct: 362 RFDREVDIGIPDSTGRLEILQIHTKNMK----LSDDVDLEQVANETHGHVGADLAALCSE 417
Query: 449 AVSFALNRQLSMDDLT-KPVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSRLN 503
A A+ +++ + DL + +D E S+ VTMDDF AL + P A + ++ +
Sbjct: 418 AALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWE 477
Query: 504 GMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ D + + + VE K K G +P L GP G GKT LA +
Sbjct: 478 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 537
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + ++F+ A
Sbjct: 538 NFISIKGPELLTMWFGESE--ANVREIFDKA 566
Score = 392 (143.0 bits), Expect = 3.3e-33, Sum P(2) = 3.3e-33
Identities = 98/265 (36%), Positives = 147/265 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFP---PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKM 277
IGGL D+ R +P P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 479 IGGLE----DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 278 LNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS 337
I GPE+L+ + GE+E N+R++F A Q+ V+ FDE+D+I K+
Sbjct: 535 CQANFISI-KGPELLTMWFGESEANVREIFDKAR--------QAAPCVLFFDELDSIAKA 585
Query: 338 RGST-RDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
RG DG G D ++NQ+LT++DG+ + NV +IG TNR D++D A+LRPGRL+ + I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LPDE R+ IL+ + K S +A DV+L LA T +SGA+L + + A A+
Sbjct: 646 PLPDEKSRIAILKANLRK----SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 701
Query: 457 QLSMD---DLTKPVDEESIKVTMDD 478
+ + + + + +++V DD
Sbjct: 702 SIENEIRRERERQTNPSAMEVEEDD 726
Score = 45 (20.9 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 19/86 (22%), Positives = 37/86 (43%)
Query: 8 QSSGVTTMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPS 67
Q S + V + + D ++ +L+ +L FR + L V + S +
Sbjct: 19 QKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFR--GDTVLLKGKKRREAVCIVLSDDT 76
Query: 68 VNKGQIALNSVQRRHAKVSTGDHVSL 93
+ +I +N V R + +V GD +S+
Sbjct: 77 CSDEKIRMNRVVRNNLRVRLGDVISI 102
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 458 (166.3 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 142/397 (35%), Positives = 205/397 (51%)
Query: 208 IFRHKEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPG 264
I R E L +G IGG + A I R + P + LG+K +G+LLYGPPG
Sbjct: 193 IKRDDEEKLDEIGYDDIGGCKKQLAQI-REMIELPLRHPGLFKTLGVKPPRGVLLYGPPG 251
Query: 265 TGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLH 324
+GKT +AR + G ++NGPEV+SK GE E N+R F +AE +
Sbjct: 252 SGKTCIARAVANE-TGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPA-------- 302
Query: 325 VIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEAL 384
+I DEID+I R T +G V +V+QLLT +DG++S V++I TNR++ +D AL
Sbjct: 303 IIFIDEIDSIAPKREKT-NGE-VERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPAL 360
Query: 385 LRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEG 444
R GR + +++I +PD+NGR +IL+IHT MK L+PDV L+ELA+ T + GA+L
Sbjct: 361 RRFGRFDREIDIGVPDDNGRFEILRIHTKNMK----LSPDVKLEELASNTHGFVGADLAQ 416
Query: 445 VAKSAVSFALNRQLSMDDLTKPV-DEE---SIKVTMDDFLHALYEIVPAFGASTDDLERS 500
+ A + ++ + DL + D+E S+ VT D F AL P+ T +E
Sbjct: 417 LCTEAALTCIREKMDVIDLEDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETV-VEVP 475
Query: 501 RLNGMVDCG--DRHKHIYQRAMLL-VEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATA 554
+ D G D K + +L ++ K K G SP L GP G GKT LA
Sbjct: 476 NVK-WDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAV 534
Query: 555 GIDSDFPFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
+ FV I E + + ES A + +VF+ A
Sbjct: 535 ASECSANFVSIKGPELLTMWFGESE--ANVREVFDKA 569
Score = 375 (137.1 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
Identities = 93/246 (37%), Positives = 135/246 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL E R + P K G+ +G+L YGPPG GKTL+A+ + +
Sbjct: 482 IGGLD-EVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSA 540
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
I GPE+L+ + GE+E N+R++F A R V+ FDE+D+I RGS
Sbjct: 541 NFVSI-KGPELLTMWFGESEANVREVFDKA----RAAAPC----VLFFDELDSIGTQRGS 591
Query: 341 TR-DGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
+ DG+G D ++NQLLT+IDGV N+ IG TNR ++LDEALLRPGRL+ + I LP
Sbjct: 592 SLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLP 651
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLS 459
D R+ IL K +A +V + LA +T +SGA+L + + A A+ +
Sbjct: 652 DLGARISILTAILRKCP----VAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDAID 707
Query: 460 MDDLTK 465
+++ K
Sbjct: 708 AEEMNK 713
Score = 50 (22.7 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 39 LNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIALNSVQRRHAKVSTGDHV 91
LNF + + S + + + +++G+I +N V R++ +V GD V
Sbjct: 52 LNF-FRGDTIIIKGKKRHSTICIILNDNDLDEGKIRINKVARKNLRVCLGDVV 103
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 458 (166.3 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 142/397 (35%), Positives = 205/397 (51%)
Query: 208 IFRHKEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPG 264
I R E L +G IGG + A I R + P + LG+K +G+LLYGPPG
Sbjct: 193 IKRDDEEKLDEIGYDDIGGCKKQLAQI-REMIELPLRHPGLFKTLGVKPPRGVLLYGPPG 251
Query: 265 TGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLH 324
+GKT +AR + G ++NGPEV+SK GE E N+R F +AE +
Sbjct: 252 SGKTCIARAVANE-TGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPA-------- 302
Query: 325 VIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEAL 384
+I DEID+I R T +G V +V+QLLT +DG++S V++I TNR++ +D AL
Sbjct: 303 IIFIDEIDSIAPKREKT-NGE-VERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPAL 360
Query: 385 LRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEG 444
R GR + +++I +PD+NGR +IL+IHT MK L+PDV L+ELA+ T + GA+L
Sbjct: 361 RRFGRFDREIDIGVPDDNGRFEILRIHTKNMK----LSPDVKLEELASNTHGFVGADLAQ 416
Query: 445 VAKSAVSFALNRQLSMDDLTKPV-DEE---SIKVTMDDFLHALYEIVPAFGASTDDLERS 500
+ A + ++ + DL + D+E S+ VT D F AL P+ T +E
Sbjct: 417 LCTEAALTCIREKMDVIDLEDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETV-VEVP 475
Query: 501 RLNGMVDCG--DRHKHIYQRAMLL-VEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATA 554
+ D G D K + +L ++ K K G SP L GP G GKT LA
Sbjct: 476 NVK-WDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAV 534
Query: 555 GIDSDFPFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
+ FV I E + + ES A + +VF+ A
Sbjct: 535 ASECSANFVSIKGPELLTMWFGESE--ANVREVFDKA 569
Score = 375 (137.1 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
Identities = 93/246 (37%), Positives = 135/246 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL E R + P K G+ +G+L YGPPG GKTL+A+ + +
Sbjct: 482 IGGLD-EVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSA 540
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
I GPE+L+ + GE+E N+R++F A R V+ FDE+D+I RGS
Sbjct: 541 NFVSI-KGPELLTMWFGESEANVREVFDKA----RAAAPC----VLFFDELDSIGTQRGS 591
Query: 341 TR-DGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
+ DG+G D ++NQLLT+IDGV N+ IG TNR ++LDEALLRPGRL+ + I LP
Sbjct: 592 SLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLP 651
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLS 459
D R+ IL K +A +V + LA +T +SGA+L + + A A+ +
Sbjct: 652 DLGARISILTAILRKCP----VAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDAID 707
Query: 460 MDDLTK 465
+++ K
Sbjct: 708 AEEMNK 713
Score = 50 (22.7 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 39 LNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIALNSVQRRHAKVSTGDHV 91
LNF + + S + + + +++G+I +N V R++ +V GD V
Sbjct: 52 LNF-FRGDTIIIKGKKRHSTICIILNDNDLDEGKIRINKVARKNLRVCLGDVV 103
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 464 (168.4 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 135/391 (34%), Positives = 206/391 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I + + P + +G+K +G+LLYGPPGTGKT
Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 252
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 253 LIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA--------IIFI 303
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DE+DAI R T G V IV+QLLT +DG++ +V+++ TNR + +D AL R G
Sbjct: 304 DELDAIAPKREKTH-GE-VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+ILQIHT MK LA DV+L+++A T + GA+L +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMK----LADDVDLEQVANETHGHVGADLAALCSE 417
Query: 449 AVSFALNRQLSMDDLT-KPVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSRLN 503
A A+ +++ + DL + +D E S+ VTMDDF AL + P A + ++ +
Sbjct: 418 AALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWE 477
Query: 504 GMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ D + + + VE K K G +P L GP G GKT LA +
Sbjct: 478 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 537
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + ++F+ A
Sbjct: 538 NFISIKGPELLTMWFGESE--ANVREIFDKA 566
Score = 394 (143.8 bits), Expect = 5.0e-33, Sum P(2) = 5.0e-33
Identities = 98/265 (36%), Positives = 148/265 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFP---PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKM 277
IGGL D+ R +P P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 479 IGGLE----DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 278 LNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS 337
I GPE+L+ + GE+E N+R++F A Q+ V+ FDE+D+I K+
Sbjct: 535 CQANFISI-KGPELLTMWFGESEANVREIFDKAR--------QAAPCVLFFDELDSIAKA 585
Query: 338 RGST-RDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
RG DG G D ++NQ+LT++DG+ + NV +IG TNR D++D A+LRPGRL+ + I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LPDE R+ IL+ + K S +A DV+L+ LA T +SGA+L + + A A+
Sbjct: 646 PLPDEKSRVAILKANLRK----SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 701
Query: 457 QLSMD---DLTKPVDEESIKVTMDD 478
+ + + + + +++V DD
Sbjct: 702 SIESEIRRERERQTNPSAMEVEEDD 726
Score = 41 (19.5 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 59 VLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSL 93
V + S + + +I +N V R + +V GD +S+
Sbjct: 68 VCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISI 102
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 464 (168.4 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 135/391 (34%), Positives = 206/391 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I + + P + +G+K +G+LLYGPPGTGKT
Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 252
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 253 LIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA--------IIFI 303
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DE+DAI R T G V IV+QLLT +DG++ +V+++ TNR + +D AL R G
Sbjct: 304 DELDAIAPKREKTH-GE-VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+ILQIHT MK LA DV+L+++A T + GA+L +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMK----LADDVDLEQVANETHGHVGADLAALCSE 417
Query: 449 AVSFALNRQLSMDDLT-KPVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSRLN 503
A A+ +++ + DL + +D E S+ VTMDDF AL + P A + ++ +
Sbjct: 418 AALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWE 477
Query: 504 GMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ D + + + VE K K G +P L GP G GKT LA +
Sbjct: 478 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 537
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + ++F+ A
Sbjct: 538 NFISIKGPELLTMWFGESE--ANVREIFDKA 566
Score = 394 (143.8 bits), Expect = 5.0e-33, Sum P(2) = 5.0e-33
Identities = 98/265 (36%), Positives = 148/265 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFP---PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKM 277
IGGL D+ R +P P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 479 IGGLE----DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 278 LNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS 337
I GPE+L+ + GE+E N+R++F A Q+ V+ FDE+D+I K+
Sbjct: 535 CQANFISI-KGPELLTMWFGESEANVREIFDKAR--------QAAPCVLFFDELDSIAKA 585
Query: 338 RGST-RDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
RG DG G D ++NQ+LT++DG+ + NV +IG TNR D++D A+LRPGRL+ + I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LPDE R+ IL+ + K S +A DV+L+ LA T +SGA+L + + A A+
Sbjct: 646 PLPDEKSRVAILKANLRK----SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 701
Query: 457 QLSMD---DLTKPVDEESIKVTMDD 478
+ + + + + +++V DD
Sbjct: 702 SIESEIRRERERQTNPSAMEVEEDD 726
Score = 41 (19.5 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 59 VLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSL 93
V + S + + +I +N V R + +V GD +S+
Sbjct: 68 VCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISI 102
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 464 (168.4 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 135/391 (34%), Positives = 206/391 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I + + P + +G+K +G+LLYGPPGTGKT
Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 252
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 253 LIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA--------IIFI 303
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DE+DAI R T G V IV+QLLT +DG++ +V+++ TNR + +D AL R G
Sbjct: 304 DELDAIAPKREKTH-GE-VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+ILQIHT MK LA DV+L+++A T + GA+L +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMK----LADDVDLEQVANETHGHVGADLAALCSE 417
Query: 449 AVSFALNRQLSMDDLT-KPVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSRLN 503
A A+ +++ + DL + +D E S+ VTMDDF AL + P A + ++ +
Sbjct: 418 AALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWE 477
Query: 504 GMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ D + + + VE K K G +P L GP G GKT LA +
Sbjct: 478 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 537
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + ++F+ A
Sbjct: 538 NFISIKGPELLTMWFGESE--ANVREIFDKA 566
Score = 394 (143.8 bits), Expect = 5.0e-33, Sum P(2) = 5.0e-33
Identities = 98/265 (36%), Positives = 148/265 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFP---PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKM 277
IGGL D+ R +P P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 479 IGGLE----DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 278 LNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS 337
I GPE+L+ + GE+E N+R++F A Q+ V+ FDE+D+I K+
Sbjct: 535 CQANFISI-KGPELLTMWFGESEANVREIFDKAR--------QAAPCVLFFDELDSIAKA 585
Query: 338 RGST-RDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
RG DG G D ++NQ+LT++DG+ + NV +IG TNR D++D A+LRPGRL+ + I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LPDE R+ IL+ + K S +A DV+L+ LA T +SGA+L + + A A+
Sbjct: 646 PLPDEKSRVAILKANLRK----SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 701
Query: 457 QLSMD---DLTKPVDEESIKVTMDD 478
+ + + + + +++V DD
Sbjct: 702 SIESEIRRERERQTNPSAMEVEEDD 726
Score = 41 (19.5 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 59 VLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSL 93
V + S + + +I +N V R + +V GD +S+
Sbjct: 68 VCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISI 102
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 464 (168.4 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 135/391 (34%), Positives = 206/391 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I + + P + +G+K +G+LLYGPPGTGKT
Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 252
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 253 LIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA--------IIFI 303
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DE+DAI R T G V IV+QLLT +DG++ +V+++ TNR + +D AL R G
Sbjct: 304 DELDAIAPKREKTH-GE-VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+ILQIHT MK LA DV+L+++A T + GA+L +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMK----LADDVDLEQVANETHGHVGADLAALCSE 417
Query: 449 AVSFALNRQLSMDDLT-KPVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSRLN 503
A A+ +++ + DL + +D E S+ VTMDDF AL + P A + ++ +
Sbjct: 418 AALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWE 477
Query: 504 GMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ D + + + VE K K G +P L GP G GKT LA +
Sbjct: 478 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 537
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + ++F+ A
Sbjct: 538 NFISIKGPELLTMWFGESE--ANVREIFDKA 566
Score = 394 (143.8 bits), Expect = 5.0e-33, Sum P(2) = 5.0e-33
Identities = 98/265 (36%), Positives = 148/265 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFP---PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKM 277
IGGL D+ R +P P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 479 IGGLE----DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 278 LNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS 337
I GPE+L+ + GE+E N+R++F A Q+ V+ FDE+D+I K+
Sbjct: 535 CQANFISI-KGPELLTMWFGESEANVREIFDKAR--------QAAPCVLFFDELDSIAKA 585
Query: 338 RGST-RDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
RG DG G D ++NQ+LT++DG+ + NV +IG TNR D++D A+LRPGRL+ + I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LPDE R+ IL+ + K S +A DV+L+ LA T +SGA+L + + A A+
Sbjct: 646 PLPDEKSRVAILKANLRK----SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 701
Query: 457 QLSMD---DLTKPVDEESIKVTMDD 478
+ + + + + +++V DD
Sbjct: 702 SIESEIRRERERQTNPSAMEVEEDD 726
Score = 41 (19.5 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 59 VLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSL 93
V + S + + +I +N V R + +V GD +S+
Sbjct: 68 VCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISI 102
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 464 (168.4 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 135/391 (34%), Positives = 206/391 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I + + P + +G+K +G+LLYGPPGTGKT
Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 252
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 253 LIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA--------IIFI 303
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DE+DAI R T G V IV+QLLT +DG++ +V+++ TNR + +D AL R G
Sbjct: 304 DELDAIAPKREKTH-GE-VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+ILQIHT MK LA DV+L+++A T + GA+L +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMK----LADDVDLEQVANETHGHVGADLAALCSE 417
Query: 449 AVSFALNRQLSMDDLT-KPVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSRLN 503
A A+ +++ + DL + +D E S+ VTMDDF AL + P A + ++ +
Sbjct: 418 AALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWE 477
Query: 504 GMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ D + + + VE K K G +P L GP G GKT LA +
Sbjct: 478 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 537
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + ++F+ A
Sbjct: 538 NFISIKGPELLTMWFGESE--ANVREIFDKA 566
Score = 394 (143.8 bits), Expect = 5.0e-33, Sum P(2) = 5.0e-33
Identities = 98/265 (36%), Positives = 148/265 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFP---PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKM 277
IGGL D+ R +P P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 479 IGGLE----DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 278 LNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS 337
I GPE+L+ + GE+E N+R++F A Q+ V+ FDE+D+I K+
Sbjct: 535 CQANFISI-KGPELLTMWFGESEANVREIFDKAR--------QAAPCVLFFDELDSIAKA 585
Query: 338 RGST-RDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
RG DG G D ++NQ+LT++DG+ + NV +IG TNR D++D A+LRPGRL+ + I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LPDE R+ IL+ + K S +A DV+L+ LA T +SGA+L + + A A+
Sbjct: 646 PLPDEKSRVAILKANLRK----SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 701
Query: 457 QLSMD---DLTKPVDEESIKVTMDD 478
+ + + + + +++V DD
Sbjct: 702 SIESEIRRERERQTNPSAMEVEEDD 726
Score = 41 (19.5 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 59 VLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSL 93
V + S + + +I +N V R + +V GD +S+
Sbjct: 68 VCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISI 102
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 464 (168.4 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 135/391 (34%), Positives = 206/391 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I + + P + +G+K +G+LLYGPPGTGKT
Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 252
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 253 LIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA--------IIFI 303
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DE+DAI R T G V IV+QLLT +DG++ +V+++ TNR + +D AL R G
Sbjct: 304 DELDAIAPKREKTH-GE-VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+ILQIHT MK LA DV+L+++A T + GA+L +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMK----LADDVDLEQVANETHGHVGADLAALCSE 417
Query: 449 AVSFALNRQLSMDDLT-KPVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSRLN 503
A A+ +++ + DL + +D E S+ VTMDDF AL + P A + ++ +
Sbjct: 418 AALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWE 477
Query: 504 GMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ D + + + VE K K G +P L GP G GKT LA +
Sbjct: 478 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 537
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + ++F+ A
Sbjct: 538 NFISIKGPELLTMWFGESE--ANVREIFDKA 566
Score = 392 (143.0 bits), Expect = 8.8e-33, Sum P(2) = 8.8e-33
Identities = 98/265 (36%), Positives = 146/265 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFP---PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKM 277
IGGL D+ R +P P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 479 IGGLE----DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 278 LNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS 337
I GPE+L+ + GE+E N+R++F A Q+ V+ FDE+D+I K+
Sbjct: 535 CQANFISI-KGPELLTMWFGESEANVREIFDKAR--------QAAPCVLFFDELDSIAKA 585
Query: 338 RGST-RDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
RG DG G D ++NQ+LT++DG+ + NV +IG TNR D++D A+LRPGRL+ + I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LPDE R+ IL+ N K A DV+L+ LA T +SGA+L + + A A+
Sbjct: 646 PLPDEKSRVAILK--ANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 703
Query: 457 QLSMD---DLTKPVDEESIKVTMDD 478
+ + + + + +++V DD
Sbjct: 704 SIESEIRRERERQTNPSAMEVEEDD 728
Score = 41 (19.5 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 59 VLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSL 93
V + S + + +I +N V R + +V GD +S+
Sbjct: 68 VCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISI 102
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 464 (168.4 bits), Expect = 2.3e-41, Sum P(2) = 2.3e-41
Identities = 135/391 (34%), Positives = 206/391 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I + + P + +G+K +G+LLYGPPGTGKT
Sbjct: 210 EEESLNEVGYDDIGGCRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 268
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 269 LIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA--------IIFI 319
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DE+DAI R T G V IV+QLLT +DG++ +V+++ TNR + +D AL R G
Sbjct: 320 DELDAIAPKREKTH-GE-VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 377
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+ILQIHT MK LA DV+L+++A T + GA+L +
Sbjct: 378 RFDREVDIGIPDATGRLEILQIHTKNMK----LADDVDLEQVANETHGHVGADLAALCSE 433
Query: 449 AVSFALNRQLSMDDLT-KPVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSRLN 503
A A+ +++ + DL + +D E S+ VTMDDF AL + P A + ++ +
Sbjct: 434 AALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWE 493
Query: 504 GMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ D + + + VE K K G +P L GP G GKT LA +
Sbjct: 494 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 553
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + ++F+ A
Sbjct: 554 NFISIKGPELLTMWFGESE--ANVREIFDKA 582
Score = 394 (143.8 bits), Expect = 5.6e-33, Sum P(2) = 5.6e-33
Identities = 98/265 (36%), Positives = 148/265 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFP---PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKM 277
IGGL D+ R +P P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 495 IGGLE----DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 550
Query: 278 LNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS 337
I GPE+L+ + GE+E N+R++F A Q+ V+ FDE+D+I K+
Sbjct: 551 CQANFISI-KGPELLTMWFGESEANVREIFDKAR--------QAAPCVLFFDELDSIAKA 601
Query: 338 RGST-RDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
RG DG G D ++NQ+LT++DG+ + NV +IG TNR D++D A+LRPGRL+ + I
Sbjct: 602 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 661
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LPDE R+ IL+ + K S +A DV+L+ LA T +SGA+L + + A A+
Sbjct: 662 PLPDEKSRVAILKANLRK----SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 717
Query: 457 QLSMD---DLTKPVDEESIKVTMDD 478
+ + + + + +++V DD
Sbjct: 718 SIESEIRRERERQTNPSAMEVEEDD 742
Score = 41 (19.5 bits), Expect = 2.3e-41, Sum P(2) = 2.3e-41
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 59 VLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSL 93
V + S + + +I +N V R + +V GD +S+
Sbjct: 84 VCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISI 118
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 463 (168.0 bits), Expect = 2.7e-41, P = 2.7e-41
Identities = 135/392 (34%), Positives = 206/392 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E NL +G IGG + A I R + P + +GIK +G+LLYGPPGTGKT
Sbjct: 212 EENNLNEVGYDDIGGCRKQMAQI-REMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKT 270
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
LMAR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 271 LMARAVANE-TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPA--------IIFI 321
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DEID+I R T +G V +V+QLLT +DG+++ +NV+++ TNR + +D AL R G
Sbjct: 322 DEIDSIAPKREKT-NGE-VERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFG 379
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+ILQIHT MK L DV+L+++AA T Y G+++ +
Sbjct: 380 RFDREVDIGIPDPTGRLEILQIHTKNMK----LGDDVDLEQIAAETHGYVGSDVAALCSE 435
Query: 449 AVSFALNRQLSMDDLTKP-VDEE---SIKVTMDDFLHALYEIVPAFGASTDDLERSRLNG 504
A + ++ + DL + +D E S+ VTM++F AL P+ +E +
Sbjct: 436 AAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGVSNPSALREVAVVEVPNVR- 494
Query: 505 MVDCG--DRHKH-IYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDS 558
D G D K + ++ V+ K K G SP L GP G+GKT LA +
Sbjct: 495 WEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANEC 554
Query: 559 DFPFVKIISAESMIGLHESTKCAQIVKVFEDA 590
F+ + E ++ + + I +F+ A
Sbjct: 555 AANFISVKGPE-LLSMWFGESESNIRDIFDKA 585
Score = 419 (152.6 bits), Expect = 3.0e-36, P = 3.0e-36
Identities = 104/266 (39%), Positives = 149/266 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N++ IGGL D+ R V P K G+ +G+L YGPPGTGKT++A+ +
Sbjct: 492 NVRWEDIGGLDEVKQDL-REQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAV 550
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
V GPE+LS + GE+E NIRD+F A R ++ DE+D+I
Sbjct: 551 ANECAANFIS-VKGPELLSMWFGESESNIRDIFDKA----RAAAPC----IVFLDELDSI 601
Query: 335 CKSRG-STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQ 393
K+RG S D G D +VNQLLT++DG+ S NV +IG TNR + LD AL RPGRL+
Sbjct: 602 AKARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSL 661
Query: 394 VEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFA 453
+ + LPDE GRL IL+ K ++ DV+LQ +A +T +SGA+L + + AV A
Sbjct: 662 IYVPLPDELGRLSILKAQLRKTP----VSDDVDLQYIANKTHGFSGADLGFITQRAVKIA 717
Query: 454 LNRQLSMD-DLTKPVDEESIKVTMDD 478
+ ++ D + TK ++ V MD+
Sbjct: 718 IKESITADINRTKALEAAGEDVPMDE 743
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 462 (167.7 bits), Expect = 3.3e-41, Sum P(2) = 3.3e-41
Identities = 135/391 (34%), Positives = 205/391 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I + + P + +G+K +G+LLYGPPGTGKT
Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 252
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 253 LIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA--------IIFI 303
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DE+DAI R T G V IV+QLLT +DG++ +V+++ TNR + +D AL R G
Sbjct: 304 DELDAIAPKREKTH-GE-VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+ILQIHT MK LA DV+L+++A T + GA+L +
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMK----LADDVDLEQVANETHGHVGADLAALCSE 417
Query: 449 AVSFALNRQLSMDDLT-KPVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSRLN 503
A A+ +++ + DL + +D E S+ VTMDDF AL + P A + ++ +
Sbjct: 418 AALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWE 477
Query: 504 GMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ D + + VE K K G +P L GP G GKT LA +
Sbjct: 478 DIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 537
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + ++F+ A
Sbjct: 538 NFISIKGPELLTMWFGESE--ANVREIFDKA 566
Score = 393 (143.4 bits), Expect = 6.7e-33, Sum P(2) = 6.7e-33
Identities = 90/235 (38%), Positives = 138/235 (58%)
Query: 248 KLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLF 307
K G+ KG+L YGPPG GKTL+A+ I I GPE+L+ + GE+E N+R++F
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEANVREIF 563
Query: 308 ADAENDQRTRGDQSDLHVIIFDEIDAICKSRGST-RDGTGVHDSIVNQLLTKIDGVESLN 366
A Q+ V+ FDE+D+I K+RG DG G D ++NQ+LT++DG+ +
Sbjct: 564 DKAR--------QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Query: 367 NVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVN 426
NV +IG TNR D++D A+LRPGRL+ + I LPDE R+ IL+ + K S +A DV+
Sbjct: 616 NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK----SPVAKDVD 671
Query: 427 LQELAARTKNYSGAELEGVAKSAVSFALNRQLSMD---DLTKPVDEESIKVTMDD 478
L+ LA T +SGA+L + + A A+ + + + + + +++V DD
Sbjct: 672 LEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDD 726
Score = 41 (19.5 bits), Expect = 3.3e-41, Sum P(2) = 3.3e-41
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 59 VLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSL 93
V + S + + +I +N V R + +V GD +S+
Sbjct: 68 VCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISI 102
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 461 (167.3 bits), Expect = 4.8e-41, P = 4.8e-41
Identities = 130/391 (33%), Positives = 204/391 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E NL +G IGG + A I R + P + +GIK +G+L+YGPPGTGKT
Sbjct: 215 EENNLNEVGYDDIGGCRKQMAQI-RELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKT 273
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
LMAR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 274 LMARAVANE-TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPA--------IIFI 324
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DEID+I R T +G V +V+QLLT +DG+++ +NV+++ TNR + +D AL R G
Sbjct: 325 DEIDSIAPKREKT-NGE-VERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFG 382
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+IL IHT MK L DV+L+ +AA T Y G++L +
Sbjct: 383 RFDREVDIGIPDPTGRLEILSIHTKNMK----LGEDVDLETIAAETHGYVGSDLASLCSE 438
Query: 449 AVSFALNRQLSMDDLTKP-VDEE---SIKVTMDDFLHALYEIVPAF--GASTDDLERSRL 502
A + ++ + DL + +D E S+ VTM++F +AL P+ + ++ R
Sbjct: 439 AAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRYALGVSNPSALREVAVVEVPNVRW 498
Query: 503 NGMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSD 559
+ + + + + V+ K K G SP L GP G+GKT LA +
Sbjct: 499 EDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECA 558
Query: 560 FPFVKIISAESMIGLHESTKCAQIVKVFEDA 590
F+ + E ++ + + I +F+ A
Sbjct: 559 ANFISVKGPE-LLSMWFGESESNIRDIFDKA 588
Score = 401 (146.2 bits), Expect = 3.1e-34, P = 3.1e-34
Identities = 103/269 (38%), Positives = 149/269 (55%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFP---PHVTSKLGIKHVKGMLLYGPPGTGKTLMA 271
N++ IGGL ++ R S +P P K G+ +G+L YGPPGTGKT++A
Sbjct: 495 NVRWEDIGGLE----EVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLA 550
Query: 272 RQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEI 331
+ + V GPE+LS + GE+E NIRD+F A R V+ DE+
Sbjct: 551 KAVANECAANFIS-VKGPELLSMWFGESESNIRDIFDKA----RAAAPC----VVFLDEL 601
Query: 332 DAICKSRG-STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRL 390
D+I KSRG S D G D +VNQLLT++DG+ S NV +IG TNR + LD AL+RPGRL
Sbjct: 602 DSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRL 661
Query: 391 EVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAV 450
+ V + LPD+ R IL+ K +A DV+++ +A++T +SGA+L V + AV
Sbjct: 662 DTLVYVPLPDQASREGILKAQLRKTP----VASDVDIEFIASKTHGFSGADLGFVTQRAV 717
Query: 451 SFALNRQLSMD-DLTKPVDEESIKVTMDD 478
A+ +S + + K + V M+D
Sbjct: 718 KLAIKESISAEIERQKQREAAGEDVKMED 746
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 451 (163.8 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 133/396 (33%), Positives = 205/396 (51%)
Query: 210 RHKEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTG 266
R E L +G +GG+ + A I R + P + +G+K KG+LLYGPPG+G
Sbjct: 195 REDEERLDDVGYDDVGGVRKQMAQI-RELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 253
Query: 267 KTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVI 326
KTL+AR + G +NGPE++SK GE+E N+R F +AE + + +I
Sbjct: 254 KTLIARAVANE-TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS--------II 304
Query: 327 IFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLR 386
DEID+I R T +G V IV+QLLT +DG++S +V+++G TNR + +D AL R
Sbjct: 305 FIDEIDSIAPKREKT-NGE-VERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRR 362
Query: 387 PGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVA 446
GR + +++I +PDE GRL++L+IHT MK LA DV+L+ ++ T Y GA+L +
Sbjct: 363 FGRFDREIDIGVPDEIGRLEVLRIHTKNMK----LAEDVDLERISKDTHGYVGADLAALC 418
Query: 447 KSAVSFALNRQLSMDDLTKP-VDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSR 501
A + ++ + DL +D E S+ VT + F AL P A + ++
Sbjct: 419 TEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVS 478
Query: 502 LNGMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDS 558
N + + + + + VE K K G SP L GP G GKT LA +
Sbjct: 479 WNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC 538
Query: 559 DFPFVKIISAESM-IGLHESTKCAQIVKVFEDAYKS 593
F+ + E + + ES A + ++F+ A +S
Sbjct: 539 QANFISVKGPELLTMWFGESE--ANVREIFDKARQS 572
Score = 394 (143.8 bits), Expect = 7.5e-34, Sum P(2) = 7.5e-34
Identities = 122/350 (34%), Positives = 174/350 (49%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL ++ + V P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 482 IGGLENVKREL-QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA 540
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG- 339
V GPE+L+ + GE+E N+R++F A QS V+ FDE+D+I RG
Sbjct: 541 NFIS-VKGPELLTMWFGESEANVREIFDKAR--------QSAPCVLFFDELDSIATQRGG 591
Query: 340 -STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
S DG G D ++NQLLT++DG+ + V +IG TNR D++D ALLRPGRL+ + I L
Sbjct: 592 GSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPL 651
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
PDE+ RL I + K S +A DV++ LA T+ +SGA++ + + A +A+ +
Sbjct: 652 PDEDSRLNIFKAALRK----SPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENI 707
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEIVPA-FGASTDDLERSRLNGMVDCGDRHKHIYQ 517
D + E+ + +D + + EI A F S RS V D K YQ
Sbjct: 708 EKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRS-----VSDADIRK--YQ 760
Query: 518 RAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTA--------LAATAGIDSD 559
++Q + GS E +GSG T AA AG D D
Sbjct: 761 AFAQTLQQSR-GFGSEF---RFENSAGSGATTGVADPFATSAAAAGDDDD 806
Score = 49 (22.3 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 16/72 (22%), Positives = 35/72 (48%)
Query: 56 DSFVLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEFVK 115
D+ ++LA + + +I +N V R + +V GD +S+++ P + + + ++
Sbjct: 70 DTVCIALADE-TCEEPKIRMNKVVRSNLRVRLGDVISVHQ-CPDVKYGKRVHILPVDDTV 127
Query: 116 KGSKNEQVDAVL 127
+G DA L
Sbjct: 128 EGVTGNLFDAYL 139
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 457 (165.9 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 140/393 (35%), Positives = 208/393 (52%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I + + P + +G+K +G+LLYGPPGTGKT
Sbjct: 196 EEESLNDIGYDDIGGCRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 254
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 255 LVARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA--------IIFI 305
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DE+DAI R T G V IV+QLLT +DG++ +V+++ TNR + +D AL R G
Sbjct: 306 DELDAIAPKREKTH-GE-VERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFG 363
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +++I +PD GRL+ILQIHT MK L+ DV+L++++A T + GA+L +
Sbjct: 364 RFDREIDIGIPDSTGRLEILQIHTKNMK----LSEDVDLEQISAETHGHVGADLAALCSE 419
Query: 449 AVSFALNRQLSMDDLTKP-VDEE---SIKVTMDDFLHALYEIVPAFGASTDDLERSRLNG 504
A A+ +++++ DL +D + S+ VTMDDF AL + P+ T +E +N
Sbjct: 420 AALQAIRKKMTLIDLEDDSIDADLLNSLAVTMDDFKWALSQSNPSALRETV-VEVPHVN- 477
Query: 505 MVDCG--DRHKHIYQRAMLL-VEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDS 558
D G D K Q + VE K K G +P L GP G GKT LA +
Sbjct: 478 WEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANEC 537
Query: 559 DFPFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
FV I E + + ES A + VF+ A
Sbjct: 538 QANFVSIKGPELLTMWFGESE--ANVRDVFDKA 568
Score = 373 (136.4 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 95/267 (35%), Positives = 143/267 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL E + V P K G+ +G+L YGPPG GKTL+A+ I
Sbjct: 481 IGGLD-EVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQA 539
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
I GPE+L+ + GE+E N+RD+F A Q+ ++ FDE+D+I K+RG
Sbjct: 540 NFVSI-KGPELLTMWFGESEANVRDVFDKAR--------QAAPCILFFDELDSIAKARGG 590
Query: 341 -TRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
D G D ++NQ+LT++DG+ + NV +IG TNR D++D A+LRPGRL+ + I LP
Sbjct: 591 GAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 650
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLS 459
D R IL+ + K S +A DV+L L+ T+ +SGA+L + + A A+ +
Sbjct: 651 DMPSRTAILRANLRK----SPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIREAIE 706
Query: 460 MDDLTKPVDEESIKVTMDDFLHALYEI 486
+ + + + MDD + EI
Sbjct: 707 AEIRAERQRQARKETAMDDDYDPVPEI 733
Score = 41 (19.5 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 72 QIALNSVQRRHAKVSTGDHVSLN 94
++ +N V R + +V GD +S++
Sbjct: 83 RVRMNRVTRNNLRVRLGDVISIH 105
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 448 (162.8 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 132/398 (33%), Positives = 205/398 (51%)
Query: 208 IFRHKEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPG 264
I R E L +G +GG+ + A I R + P + +G+K KG+LLYGPPG
Sbjct: 194 IKREDEERLDEVGYDDVGGVRKQMAQI-RELVELPLRHPQLFKSIGVKPPKGILLYGPPG 252
Query: 265 TGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLH 324
+GKTL+AR + G +NGPE++SK GE+E N+R F +AE + +
Sbjct: 253 SGKTLIARAVANE-TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS-------- 303
Query: 325 VIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEAL 384
+I DEID+I R T G V IV+QLLT +DG++S +V+++G TNR + +D AL
Sbjct: 304 IIFIDEIDSIAPKREKTH-GE-VERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL 361
Query: 385 LRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEG 444
R GR + +++I +PDE GRL++L+IHT MK LA DV+L+ ++ T Y GA+L
Sbjct: 362 RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMK----LAEDVDLERVSKDTHGYVGADLAA 417
Query: 445 VAKSAVSFALNRQLSMDDLT-KPVDEE---SIKVTMDDFLHALYEIVPAFGAST----DD 496
+ A + ++ + DL + +D E S+ V+ D F AL P+ T +
Sbjct: 418 LCTEAALQCIREKMDVIDLDDEEIDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPN 477
Query: 497 LERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGI 556
+ + G+ + + Q + E+ + SP L GP G GKT LA
Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 557 DSDFPFVKIISAESM-IGLHESTKCAQIVKVFEDAYKS 593
+ F+ I E + + ES A + ++F+ A +S
Sbjct: 538 ECQANFISIKGPELLTMWFGESE--ANVREIFDKARQS 573
Score = 383 (139.9 bits), Expect = 9.0e-33, Sum P(2) = 9.0e-33
Identities = 93/242 (38%), Positives = 135/242 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL ++ + V P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 483 IGGLENVKREL-QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA 541
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG- 339
I GPE+L+ + GE+E N+R++F A QS V+ FDE+D+I RG
Sbjct: 542 NFISI-KGPELLTMWFGESEANVREIFDKAR--------QSAPCVLFFDELDSIATQRGN 592
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S D G D ++NQLLT++DG+ + V +IG TNR D++D ALLRPGRL+ + I LP
Sbjct: 593 SVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 652
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLS 459
DE R QI + K S +A DV+L+ LA T+ +SGA++ + + + +A+ +
Sbjct: 653 DEESRYQIFKSCLRK----SPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIE 708
Query: 460 MD 461
D
Sbjct: 709 KD 710
Score = 51 (23.0 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 56 DSFVLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEFVK 115
D+ ++LA + ++ +I +N V R + +V GD +S+++ P + + + L+
Sbjct: 71 DTVCIALADE-TCDEPKIRMNKVVRSNLRVRLGDVISVHQ-CPDVKYGNRVHILPLDDTI 128
Query: 116 KGSKNEQVDAVL 127
+G DA L
Sbjct: 129 EGVSGNIFDAYL 140
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 448 (162.8 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 132/393 (33%), Positives = 204/393 (51%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I + + P + +G+K +G+LLYGPPGTGKT
Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 252
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE+E N+R F + E + +I
Sbjct: 253 LIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPA--------IIFI 303
Query: 329 DEIDAICKSR--GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLR 386
DE+DAI S + V IV+QLLT +DG++ +V+++ TNR + +D AL R
Sbjct: 304 DELDAIASDDCFPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 363
Query: 387 PGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVA 446
GR + +V+I +PD GRL+ILQIHT MK LA DV+L+++A T + GA+L +
Sbjct: 364 FGRFDREVDIGIPDATGRLEILQIHTKNMK----LADDVDLEQVANETHGHVGADLAALC 419
Query: 447 KSAVSFALNRQLSMDDLT-KPVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSR 501
A A+ +++ + DL + +D E S+ VTMDDF AL + P A + ++ +
Sbjct: 420 SEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVT 479
Query: 502 LNGMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDS 558
+ D + + + VE K K G +P L GP G GKT LA +
Sbjct: 480 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 539
Query: 559 DFPFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + ++F+ A
Sbjct: 540 QANFISIKGPELLTMWFGESE--ANVREIFDKA 570
Score = 392 (143.0 bits), Expect = 5.5e-33, Sum P(2) = 5.5e-33
Identities = 98/265 (36%), Positives = 147/265 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFP---PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKM 277
IGGL D+ R +P P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 483 IGGLE----DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 538
Query: 278 LNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS 337
I GPE+L+ + GE+E N+R++F A Q+ V+ FDE+D+I K+
Sbjct: 539 CQANFISI-KGPELLTMWFGESEANVREIFDKAR--------QAAPCVLFFDELDSIAKA 589
Query: 338 RGST-RDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
RG DG G D ++NQ+LT++DG+ + NV +IG TNR D++D A+LRPGRL+ + I
Sbjct: 590 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 649
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LPDE R+ IL+ + K S +A DV+L LA T +SGA+L + + A A+
Sbjct: 650 PLPDEKSRVAILKANLRK----SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 705
Query: 457 QLSMD---DLTKPVDEESIKVTMDD 478
+ + + + + +++V DD
Sbjct: 706 SIESEIRRERERQTNPSAMEVEEDD 730
Score = 43 (20.2 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 16/70 (22%), Positives = 31/70 (44%)
Query: 24 DLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIALNSVQRRHA 83
D ++ +L+ +L FR + L V + S + + +I +N V R +
Sbjct: 35 DNSVVSLSQAKMDELQLFR--GDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNL 92
Query: 84 KVSTGDHVSL 93
+V GD +S+
Sbjct: 93 RVRLGDVISI 102
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 441 (160.3 bits), Expect = 2.1e-39, Sum P(2) = 2.1e-39
Identities = 129/396 (32%), Positives = 204/396 (51%)
Query: 210 RHKEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTG 266
R E L +G +GG+ + A I R + P + +G+K KG+LLYGPPG+G
Sbjct: 195 REDEERLDEVGYDDVGGVRKQMAQI-RELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 253
Query: 267 KTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVI 326
KTL+AR + G +NGPE++SK GE+E N+R F +AE + + +I
Sbjct: 254 KTLIARAVANE-TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS--------II 304
Query: 327 IFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLR 386
DEID+I R T +G V IV+QLLT +DG++S +V+++G TNR + +D AL R
Sbjct: 305 FIDEIDSIAPKREKT-NGE-VERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRR 362
Query: 387 PGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVA 446
GR + +++I +PDE GRL++L+IHT MK LA DV+L+ ++ T Y GA+L +
Sbjct: 363 FGRFDREIDIGVPDEIGRLEVLRIHTKNMK----LAEDVDLERISKDTHGYVGADLAALC 418
Query: 447 KSAVSFALNRQLSMDDLTKP-VDEE---SIKVTMDDFLHALYEIVPAFGAST----DDLE 498
A + ++ + DL +D E S+ V+ + F AL P+ T ++
Sbjct: 419 TEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVS 478
Query: 499 RSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDS 558
+ G+ + + Q + E+ + SP L GP G GKT LA +
Sbjct: 479 WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC 538
Query: 559 DFPFVKIISAESM-IGLHESTKCAQIVKVFEDAYKS 593
F+ + E + + ES A + ++F+ A +S
Sbjct: 539 QANFISVKGPELLTMWFGESE--ANVREIFDKARQS 572
Score = 384 (140.2 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 93/242 (38%), Positives = 135/242 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL ++ + V P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 482 IGGLENVKREL-QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA 540
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG- 339
V GPE+L+ + GE+E N+R++F A QS V+ FDE+D+I RG
Sbjct: 541 NFIS-VKGPELLTMWFGESEANVREIFDKAR--------QSAPCVLFFDELDSIATQRGN 591
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S D G D ++NQLLT++DG+ + V +IG TNR D++D ALLRPGRL+ + I LP
Sbjct: 592 SAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLP 651
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLS 459
DE+ RL I + K S +A DV++ LA T+ +SGA++ + + A +A+ +
Sbjct: 652 DEDSRLNIFKACLRK----SPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIE 707
Query: 460 MD 461
D
Sbjct: 708 KD 709
Score = 49 (22.3 bits), Expect = 2.1e-39, Sum P(2) = 2.1e-39
Identities = 16/72 (22%), Positives = 35/72 (48%)
Query: 56 DSFVLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEFVK 115
D+ ++LA + + +I +N V R + +V GD +S+++ P + + + ++
Sbjct: 70 DTVCIALADE-TCEEPKIRMNKVVRSNLRVRLGDVISVHQ-CPDVKYGKRVHILPVDDTV 127
Query: 116 KGSKNEQVDAVL 127
+G DA L
Sbjct: 128 EGVTGNLFDAYL 139
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 440 (159.9 bits), Expect = 2.8e-39, Sum P(2) = 2.8e-39
Identities = 117/355 (32%), Positives = 181/355 (50%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGLS + ++ + + P + S GI +G+LL+GPPGTGKT++ R + +
Sbjct: 231 VGGLSKQI-ELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSITE 289
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+NGP ++SK++GETE IRD+F +A+ Q + +I DEID+I SR
Sbjct: 290 AHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPS--------IIFMDEIDSIAPSR-- 339
Query: 341 TRDGTGVHDS-IVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
T D +G +S +V QLLT +DG+ +++IG TNR + +D AL RPGR + +VEI +P
Sbjct: 340 TSDDSGETESRVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIP 399
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLS 459
D R +IL KM + +A++T Y GA+L + + +V A+NR
Sbjct: 400 DVEAREEILTKQFAKMNSEKCQITKEEIASIASKTHGYVGADLTALCRESVMKAINR--- 456
Query: 460 MDDLTKPVDEESIKVTMDDFLHALYEIVPA----FGASTDDLERSRLNGMVDCGDRHKHI 515
LT + + +IKVT+DD HAL EI P+ + S + G + + +
Sbjct: 457 --GLTVGIPQTAIKVTVDDVYHALPEIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEV 514
Query: 516 YQRAMLLVEQVK-VSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAE 569
Q + + K + SP LL GP G KT A +S F+ + E
Sbjct: 515 VQLPLEASDSFKNLGVSSPKGV-LLYGPPGCSKTLTAKALATESGLNFLAVKGPE 568
Score = 343 (125.8 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 85/225 (37%), Positives = 124/225 (55%)
Query: 249 LGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFA 308
LG+ KG+LLYGPPG KTL A+ + +G+ V GPE+ +K+VGE+E+ IR++F
Sbjct: 528 LGVSSPKGVLLYGPPGCSKTLTAKALATE-SGLNFLAVKGPEIFNKYVGESERAIREIFR 586
Query: 309 DAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNV 368
A + +I FDEIDAI R T +++ LL +IDGVE L V
Sbjct: 587 KAR--------AASPSIIFFDEIDAIAGDRDGDSSTTAA-SNVLTSLLNEIDGVEELKGV 637
Query: 369 LLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQ 428
+++G TN+ +D ALLRPGRL+ + ++ PD + RLQILQ + K S V+LQ
Sbjct: 638 VIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCSRKFNLQSG-DESVDLQ 696
Query: 429 ELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIK 473
+LA T SGAE+ + + A A+ +T E ++K
Sbjct: 697 KLAELTDGCSGAEVTLLCQEAGLAAIMENKEATTVTNKHFEHALK 741
Score = 207 (77.9 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 76/302 (25%), Positives = 148/302 (49%)
Query: 19 NTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVA--GDSFVLSL--ASHPSVNKGQIA 74
N P+ + ++ N+ Y +P L + N NL L S + G + V++ +S+ V+K I
Sbjct: 38 NVPTNNKSVANV-YINPEILSAMELNNGNLVLVSSSDSGSAGVVATVYSSNDIVDKNVIT 96
Query: 75 LNSVQRRHAKVSTGDHVSLNRFI--PPEDFNLALLTVELEFVKKGSKNEQVDAVLLANQL 132
++ R+ + GD V L +F+ P ++++ VE E V + ++ +D L+ L
Sbjct: 97 ISFPYRQLCGLLLGDRVELVKFMNQPQYASDISISGVE-ETVTEDVRSALLDIGLVYPGL 155
Query: 133 RKRFINQVMTAGQRVVFEYHGNNYIFTVNGAAVEGQEKSNALERGIITNETYFVFEASND 192
Q+ +R+ ++ +++ +++ S++L + T ++F S
Sbjct: 156 ------QINVDNKRITIVDVNDSLDASMDKLSIKD---SDSL-LSVHTVSPPYLF--SPT 203
Query: 193 SGIKIVNQREGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIK 252
+ I + A S + + + +GGLS + ++ + + P + S GI
Sbjct: 204 TSINVATSSFPARSK-YPNLPQQITYDQVGGLSKQI-ELLKSTIELPLNNPTLFSDFGIS 261
Query: 253 HVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAEN 312
+G+LL+GPPGTGKT++ R + + +NGP ++SK++GETE IRD+F +A+
Sbjct: 262 PPRGILLHGPPGTGKTMLLRCVANSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKK 321
Query: 313 DQ 314
Q
Sbjct: 322 FQ 323
Score = 47 (21.6 bits), Expect = 2.8e-39, Sum P(2) = 2.8e-39
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 7 SQSSGVTTMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHP 66
S+SS N ++TP + A + ++ VP +N +A+V + +LS
Sbjct: 3 SKSSSKKKNNGVSTPESSTAPAKKIKIPKSFIVRPNVPTNNKSVANVYINPEILSAME-- 60
Query: 67 SVNKGQIALNS 77
+N G + L S
Sbjct: 61 -LNNGNLVLVS 70
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 437 (158.9 bits), Expect = 2.5e-38, P = 2.5e-38
Identities = 125/391 (31%), Positives = 203/391 (51%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L ++G IGG + A I + + P + +G+K +G+L+YGPPGTGKT
Sbjct: 191 EEESLNAVGYDDIGGCRKQLAQI-KEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKT 249
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE+E N+R F +AE + +I
Sbjct: 250 LIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPA--------IIFI 300
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DEIDAI R T G V IV+QLLT +DG++ ++++++ TNR + +D AL R G
Sbjct: 301 DEIDAIAPKRDKTH-GE-VERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFG 358
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +++I +PD GRL++L+IHT MK L DV+L+++AA + + GA+L +
Sbjct: 359 RFDREIDIGIPDATGRLEVLRIHTKNMK----LHDDVDLEQIAAESHGHVGADLASLCSE 414
Query: 449 AVSFALNRQLSMDDLTKP-VDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSRLN 503
A + ++ + DL +D E S+ VTM++F +A+ + P A + ++ +
Sbjct: 415 AALQQIREKMDLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWT 474
Query: 504 GMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ K + + VE K K G P L GP G GKT LA +
Sbjct: 475 DIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQA 534
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ + E + + ES A + +F+ A
Sbjct: 535 NFISVKGPELLTMWFGESE--ANVRDIFDKA 563
Score = 374 (136.7 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 92/258 (35%), Positives = 144/258 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ + V P K G++ +G+L YGPPG GKTL+A+ I
Sbjct: 476 IGGLESVKKEL-QELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQA 534
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG- 339
V GPE+L+ + GE+E N+RD+F A + V+ FDE+D+I K+RG
Sbjct: 535 NFIS-VKGPELLTMWFGESEANVRDIFDKARSAAPC--------VLFFDELDSIAKARGG 585
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
+ D G D ++NQ+LT++DG+ + NV +IG TNR D++D A+LRPGRL+ + I LP
Sbjct: 586 NVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 645
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLS 459
D+ R IL+ + K S LA +V+L +A T+ +SGA+L + + A A+ + +
Sbjct: 646 DDKSREAILKANLRK----SPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIE 701
Query: 460 MDDLTKPVDEESIKVTMD 477
+ + E+ MD
Sbjct: 702 AEIRREKERAENQNSAMD 719
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 415 (151.1 bits), Expect = 3.2e-38, P = 3.2e-38
Identities = 106/279 (37%), Positives = 157/279 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N++ IGGL + +I R + P + K+GI+ KG+LLYGPPGTGKTL+A+ +
Sbjct: 166 NVRYEDIGGLEKQMQEI-REVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAV 224
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
N ++V G E++ KF+GE ++D+F A+ + +I DEIDAI
Sbjct: 225 ATETNATFIRVV-GSELVKKFIGEGASLVKDIFKLAKEKAPS--------IIFIDEIDAI 275
Query: 335 CKSRGSTRDGTG--VHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEV 392
R G V +++ QLL ++DG ++ +V +IG TNR D+LD A+LRPGR +
Sbjct: 276 AAKRTDALTGGDREVQRTLM-QLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDR 334
Query: 393 QVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSF 452
+E+ PDE GRL+IL+IHT KM LA DVNL+E+A T+ GAEL+ + A
Sbjct: 335 IIEVPAPDEKGRLEILKIHTRKMN----LAEDVNLEEIAKMTEGCVGAELKAICTEAGMN 390
Query: 453 ALNR---QLSMDDLTKPVDE----ESIKVTMDDFLHALY 484
A+ ++MDD K V++ + +KV L LY
Sbjct: 391 AIRELRDYVTMDDFRKAVEKIMEKKKVKVKEPAHLDVLY 429
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 434 (157.8 bits), Expect = 6.0e-38, Sum P(2) = 6.0e-38
Identities = 128/391 (32%), Positives = 201/391 (51%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E ++ +G +GG+ + A I + + P + +GIK +G+LL+GPPGTGKT
Sbjct: 200 EEESMNDIGYDDLGGVRKQLAQI-KEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKT 258
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPEV+SK GE+E N+R F + E +Q ++
Sbjct: 259 LIARAVANE-TGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPA--------ILFI 309
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DEIDAI R T +G V IV+QLLT +DGV+ +N+++I TNR + +D AL R G
Sbjct: 310 DEIDAIAPKREKT-NGE-VERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFG 367
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +++I +PD GRL+IL+IHT MK LA DV+L+++A + GA+L +
Sbjct: 368 RFDREIDIGIPDAVGRLEILRIHTKNMK----LADDVDLEQIANECHGFVGADLASLCSE 423
Query: 449 AVSFALNRQLSMDDLTKP-VDEE---SIKVTMDDFLHALYEIVPAF----GASTDDLERS 500
A + ++ + DL +D E S+ VTM++F A + P+ T + S
Sbjct: 424 AALQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWS 483
Query: 501 RLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ G+ + + + Q + E+ P L GP G GKT LA +
Sbjct: 484 DIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQA 543
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + VF+ A
Sbjct: 544 NFISIKGPELLTMWFGESE--ANVRDVFDKA 572
Score = 373 (136.4 bits), Expect = 8.4e-31, Sum P(2) = 8.4e-31
Identities = 87/221 (39%), Positives = 127/221 (57%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P K G++ +G+L YGPPG GKTL+A+ I I GPE+L+ + GE+E N
Sbjct: 506 PEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 564
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTR--DGTGVHDSIVNQLLTKID 360
+RD+F A R V+ FDE+D+I K+RG DG G D ++NQ+LT++D
Sbjct: 565 VRDVFDKA----RAAAPC----VLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMD 616
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
G+ + NV +IG TNR D++D A+LRPGRL+ + I LPDE R QIL+ K
Sbjct: 617 GMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTP---- 672
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMD 461
L+ D++L LA T +SGA+L + + A A+ + +
Sbjct: 673 LSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKE 713
Score = 43 (20.2 bits), Expect = 6.0e-38, Sum P(2) = 6.0e-38
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 59 VLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSL 93
V + S S ++ +N V R + ++ GD VS+
Sbjct: 74 VAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSI 108
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 434 (157.8 bits), Expect = 6.0e-38, Sum P(2) = 6.0e-38
Identities = 128/391 (32%), Positives = 201/391 (51%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E ++ +G +GG+ + A I + + P + +GIK +G+LL+GPPGTGKT
Sbjct: 200 EEESMNDIGYDDLGGVRKQLAQI-KEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKT 258
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPEV+SK GE+E N+R F + E +Q ++
Sbjct: 259 LIARAVANE-TGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPA--------ILFI 309
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DEIDAI R T +G V IV+QLLT +DGV+ +N+++I TNR + +D AL R G
Sbjct: 310 DEIDAIAPKREKT-NGE-VERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFG 367
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +++I +PD GRL+IL+IHT MK LA DV+L+++A + GA+L +
Sbjct: 368 RFDREIDIGIPDAVGRLEILRIHTKNMK----LADDVDLEQIANECHGFVGADLASLCSE 423
Query: 449 AVSFALNRQLSMDDLTKP-VDEE---SIKVTMDDFLHALYEIVPAF----GASTDDLERS 500
A + ++ + DL +D E S+ VTM++F A + P+ T + S
Sbjct: 424 AALQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWS 483
Query: 501 RLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ G+ + + + Q + E+ P L GP G GKT LA +
Sbjct: 484 DIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQA 543
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + VF+ A
Sbjct: 544 NFISIKGPELLTMWFGESE--ANVRDVFDKA 572
Score = 373 (136.4 bits), Expect = 8.4e-31, Sum P(2) = 8.4e-31
Identities = 87/221 (39%), Positives = 127/221 (57%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P K G++ +G+L YGPPG GKTL+A+ I I GPE+L+ + GE+E N
Sbjct: 506 PEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 564
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTR--DGTGVHDSIVNQLLTKID 360
+RD+F A R V+ FDE+D+I K+RG DG G D ++NQ+LT++D
Sbjct: 565 VRDVFDKA----RAAAPC----VLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMD 616
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
G+ + NV +IG TNR D++D A+LRPGRL+ + I LPDE R QIL+ K
Sbjct: 617 GMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTP---- 672
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMD 461
L+ D++L LA T +SGA+L + + A A+ + +
Sbjct: 673 LSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKE 713
Score = 43 (20.2 bits), Expect = 6.0e-38, Sum P(2) = 6.0e-38
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 59 VLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSL 93
V + S S ++ +N V R + ++ GD VS+
Sbjct: 74 VAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSI 108
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 417 (151.9 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 127/393 (32%), Positives = 196/393 (49%)
Query: 210 RHKEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTG 266
R E L +G IGG+ + I R + P + +G+K KG+LLYGPPG G
Sbjct: 190 REDEDRLDEVGYDDIGGVRKQLGQI-RELVELPLRHPQLFKNIGVKPPKGILLYGPPGCG 248
Query: 267 KTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVI 326
KT++AR + G ++NGPE++SK GE+E N+R F +AE + + +I
Sbjct: 249 KTMIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPS--------II 299
Query: 327 IFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLR 386
DEID+I R T+ G V IV+QLLT +DG++S +V+++G TNR + +D AL R
Sbjct: 300 FIDEIDSIAPKREKTQ-GE-VERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRR 357
Query: 387 PGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVA 446
GR + +++I++PD GRL+I++IHT MK L V+L+ +A T Y GA+L +
Sbjct: 358 FGRFDREIDITIPDATGRLEIMRIHTKNMK----LDETVDLEAVANETHGYVGADLAALC 413
Query: 447 KSAVSFALNRQLSMDDLTKPVDE----ESIKVTMDDFLHALYEIVP-AFGASTDDLERSR 501
+ + ++ + DL ES+ VT D F AL P A + ++ +
Sbjct: 414 TESALQCIREKMDVIDLEDETISAEILESMSVTQDHFRTALTLSNPSALRETVVEVPTTT 473
Query: 502 LNGMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDS 558
+ + + + VE K K G P L GP G GKT LA +
Sbjct: 474 WEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANEC 533
Query: 559 DFPFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + ++F+ A
Sbjct: 534 QANFISIKGPELLTMWFGESE--ANVRELFDKA 564
Score = 410 (149.4 bits), Expect = 8.0e-37, Sum P(2) = 8.0e-37
Identities = 99/259 (38%), Positives = 148/259 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL ++ R V P K G++ KG+L YGPPG GKTL+A+ I
Sbjct: 477 IGGLEGVKREL-RETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQA 535
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
I GPE+L+ + GE+E N+R+LF A Q+ V+ FDE+D+I +SRGS
Sbjct: 536 NFISI-KGPELLTMWFGESEANVRELFDKAR--------QAAPCVLFFDELDSIARSRGS 586
Query: 341 TR-DGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
++ D G D ++NQ+LT++DG+ + NV +IG TNR D++D A+LRPGRL+ + I LP
Sbjct: 587 SQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 646
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLS 459
D R+ IL+ NK S +A DV+L+ L +T+ +SGA+L + + A A+ +
Sbjct: 647 DLPSRVAILKACLNK----SPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRESIE 702
Query: 460 MDDLTKPVDEESIKVTMDD 478
D + +ES M+D
Sbjct: 703 KDIESTKARQESGDTKMED 721
Score = 59 (25.8 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 37 DLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLNR 95
D L F ++ L D+ + L S P+++ +I +N V R + +V GD +S+++
Sbjct: 46 DQLQFFRGDTLLIKGKKRRDTVCIVL-SDPTIDPSKIRMNKVVRNNLRVRLGDMISVHQ 103
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 426 (155.0 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 129/402 (32%), Positives = 199/402 (49%)
Query: 180 TNETYFVFEASNDSGIKI-VNQREGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFAS 238
T+ YF+ + + IK+ N E N +F + IGGLS++ I R
Sbjct: 320 TDIFYFISSTTRINFIKVHTNSEEEDN-------QFKVTYDMIGGLSSQLKAI-REIIEL 371
Query: 239 RVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGE 298
+ P + GI +G+LLYGPPGTGKT++AR + + G ++NGPE++SKF GE
Sbjct: 372 PLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEV-GAYVSVINGPEIISKFYGE 430
Query: 299 TEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTK 358
TE +R +FA+A T S +I DE+DA+C R ++ V +V LLT
Sbjct: 431 TEARLRQIFAEA-----TLRHPS---IIFIDELDALCPKREGAQNE--VEKRVVASLLTL 480
Query: 359 IDGVESLNN---VLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKM 415
+DG+ S + VL++G TNR LD AL RPGR + ++EI +P+ RL ILQ +
Sbjct: 481 MDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDILQ---KLL 537
Query: 416 KENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMD-DLTKPVDEESIKV 474
+ L +V L +LA Y GA+L+ + A +AL R L+ +L+ +K+
Sbjct: 538 QRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRRVLNKQPNLSDSKMAGLVKI 597
Query: 475 TMDDFLHALYEIVPA----FGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSK 530
T++DFL + +I P+ ++ S + G+ + + K + + E +
Sbjct: 598 TLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESF-IRM 656
Query: 531 G-SPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESM 571
G P LL GP G KT +A +S F+ I E M
Sbjct: 657 GIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELM 698
Score = 390 (142.3 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 82/223 (36%), Positives = 135/223 (60%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P ++GI+ KG+LLYGPPG KT++A+ + +G+ + GPE+++K+VGE+E+
Sbjct: 650 PESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANE-SGLNFLAIKGPELMNKYVGESERA 708
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R++F ++ R +I FDE+DA+ RGS+ V D ++ QLLT++DG+
Sbjct: 709 VREIF------RKARAVSPS--IIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGI 760
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLA 422
E L +V ++ TNR D +D+AL+RPGR++ + + LPD R +IL + + M ++
Sbjct: 761 EQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMP----IS 816
Query: 423 PDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTK 465
DVNL EL +T YSGAE+ V + A AL + + +T+
Sbjct: 817 NDVNLDELIFQTDTYSGAEIIAVCREAALLALEEDIQANSITR 859
Score = 43 (20.2 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 14/83 (16%), Positives = 36/83 (43%)
Query: 71 GQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEFVKKGSKNEQVDAVLLAN 130
G++ L+ + +++ V GD + + + A+L E + KN ++ L
Sbjct: 108 GKVGLSEMAQKNVGVKVGDAIQVQPLLG------AVLQAEEMDLALSDKNVDINEEQLTG 161
Query: 131 QLRKRFINQVMTAGQRVVFEYHG 153
L ++ +++ G + ++G
Sbjct: 162 CLLRKLDGKIVLPGNFLYCTFYG 184
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 413 (150.4 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 117/359 (32%), Positives = 177/359 (49%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL+++ +I R + P + GI +G+LLYGPPGTGKT++AR + + G
Sbjct: 346 IGGLNSQLKEI-REIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEV-G 403
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++NGPE++SKF GETE +R +FA+A T S +I DE+DA+C R
Sbjct: 404 AYVSVINGPEIISKFYGETEARLRQIFAEA-----TLRHPS---IIFIDELDALCPKREG 455
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNN---VLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
++ V +V LLT +DG+ S + VL++G TNR LD AL RPGR + ++EI
Sbjct: 456 AQNE--VEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIG 513
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
+P+ RL ILQ ++ L + L +LA Y GA+L+ + A AL R
Sbjct: 514 VPNAQDRLDILQ---KLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALRRV 570
Query: 458 LSMD-DLTKPVDEESIKVTMDDFLHALYEIVPA----FGASTDDLERSRLNGMVDCGDRH 512
L +L +K+T+ DFL + +I P+ ++ S + G+ + +
Sbjct: 571 LRRQPNLPDSKMAGLVKITLKDFLQGMNDIRPSAMREVAVDVPNVSWSDIGGLENVKLKL 630
Query: 513 KHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESM 571
K + + E P LL GP G KT +A +S F+ I E M
Sbjct: 631 KQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELM 689
Score = 265 (98.3 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 60/168 (35%), Positives = 99/168 (58%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ IGGL + ++A + P +++GI+ KG+LLYGPPG KT++A+ +
Sbjct: 614 NVSWSDIGGLENVKLKL-KQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKAL 672
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
+G+ + GPE+++K+VGE+E+ +R++F A R +I FDE+DA+
Sbjct: 673 ANE-SGLNFLAIKGPELMNKYVGESERAVREIFRKA----RAVAPS----IIFFDELDAL 723
Query: 335 CKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDE 382
RGS+ V D ++ QLLT++DG+E L NV ++ TNR D +D+
Sbjct: 724 AVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNRPDRIDK 771
Score = 50 (22.7 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 17/83 (20%), Positives = 37/83 (44%)
Query: 71 GQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEFVKKGSKNEQVDAVLLAN 130
G++ L+ V +++ V GD + + + L EL+ V KN ++ LA
Sbjct: 100 GKVGLSEVAQKNVGVRVGDAIHVQPVL-----GAVLQAEELD-VALSDKNADINEEQLAG 153
Query: 131 QLRKRFINQVMTAGQRVVFEYHG 153
+ ++ +V+ G + ++G
Sbjct: 154 CILRKLDGKVVLPGNFLYCTFYG 176
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 418 (152.2 bits), Expect = 3.2e-36, P = 3.2e-36
Identities = 117/359 (32%), Positives = 178/359 (49%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL+++ +I R + P + GI +G+LLYGPPGTGKT++AR + + G
Sbjct: 349 IGGLNSQLKEI-REIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANEV-G 406
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++NGPE++SKF GETE +R +FA+A T S +I DE+DA+C R
Sbjct: 407 AYVSVINGPEIISKFYGETEARLRQIFAEA-----TLRHPS---IIFIDELDALCPKREG 458
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNN---VLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
++ V +V LLT +DG+ S + VL++G TNR LD AL RPGR + ++EI
Sbjct: 459 AQNE--VEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIG 516
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
+P+ RL ILQ ++ L + L +LA Y GA+L+ + A +AL R
Sbjct: 517 VPNAQDRLDILQ---KLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRV 573
Query: 458 L-SMDDLTKPVDEESIKVTMDDFLHALYEIVPA----FGASTDDLERSRLNGMVDCGDRH 512
L +L +K+T+ DFL + +I P+ ++ S + G+ + +
Sbjct: 574 LRKQPNLPDSKVAGLVKITLKDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKL 633
Query: 513 KHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESM 571
K + + E P LL GP G KT +A +S F+ I E M
Sbjct: 634 KQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELM 692
Score = 271 (100.5 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 56/144 (38%), Positives = 91/144 (63%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P +++GI+ KG+LLYGPPG KT++A+ + +G+ + GPE+++K+VGE+E+
Sbjct: 644 PESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANE-SGLNFLAIKGPELMNKYVGESERA 702
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R++F A R +I FDE+DA+ RGS+ V D ++ QLLT++DG+
Sbjct: 703 VREIFRKA----RAVAPS----IIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGI 754
Query: 363 ESLNNVLLIGMTNRKDMLDEALLR 386
E L +V ++ TNR D +D+ LLR
Sbjct: 755 EQLKDVTILAATNRPDRIDKELLR 778
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 401 (146.2 bits), Expect = 4.8e-36, Sum P(2) = 4.8e-36
Identities = 117/362 (32%), Positives = 181/362 (50%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS++ I R + + GI +G+LLYGPPGTGKTL+A+ I + G
Sbjct: 320 IGGLSSQLKTI-RETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIANEV-G 377
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++NGPE++SKF GE+E +R +FA+A + + +I DE+DA+C R
Sbjct: 378 AHVTVINGPEIISKFYGESESRLRQIFAEASLRRPS--------IIFIDELDALCPKREG 429
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNN---VLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
++ V +V LLT +DG+ S + ++++G TNR LD AL RPGR + ++EI
Sbjct: 430 AQNE--VEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEIG 487
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
+P+ RL ILQ K+ +S A + + +LA Y GA+L + K A +AL R
Sbjct: 488 IPNAQDRLDILQKLLKKVP-HSLTAAE--MMQLADSAHGYVGADLAALCKEAGLYALRRA 544
Query: 458 LSMDDLTKPVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLER---SRLNGMVDCGD 510
L P D E S+ + +DFL + ++ P A D+ + S + G+ D
Sbjct: 545 LGKR--AHPSDTEVAGSVMIAFNDFLQGMKDVRPSAMREVAVDVPKVSWSDIGGLEDVKL 602
Query: 511 RHKHIYQRAMLLVEQVKVSKG-SPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAE 569
+ K + + + + G P LL GP G KT +A +S F+ + E
Sbjct: 603 KLKQAVEWPLKHPDSF-IRMGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPE 661
Query: 570 SM 571
M
Sbjct: 662 LM 663
Score = 168 (64.2 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 35/94 (37%), Positives = 60/94 (63%)
Query: 248 KLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLF 307
++GI+ KG+LLYGPPG KT++A+ + +G+ V GPE+++K+VGE+E+ +R++F
Sbjct: 620 RMGIQPPKGVLLYGPPGCSKTMIAKALAHE-SGLNFLAVKGPELMNKYVGESERAVREIF 678
Query: 308 ADAENDQRTRGDQSDLHVIIFDEIDAICKSRGST 341
A + ++ FDEIDA+ RG++
Sbjct: 679 RKARMVSPS--------ILFFDEIDALAVERGNS 704
Score = 58 (25.5 bits), Expect = 4.8e-36, Sum P(2) = 4.8e-36
Identities = 29/131 (22%), Positives = 57/131 (43%)
Query: 48 LFLASVAGDSFVLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALL 107
+ L + G V + P G+I L+ +++ VS GD V++ P A++
Sbjct: 57 VLLTAAGGRQEVCTAWPTPGFPGGKIGLSDTTQKNLGVSVGDAVTVQ---PVTG---AVI 110
Query: 108 TVELEFVKKGSKNEQVDAVLLANQLRKRFINQVMTAGQRVVFEYHG---NNYIFTVNGA- 163
E VK K+ ++A ++ L + +V+ + F ++G N + V G
Sbjct: 111 QAEEVAVKLRDKDACINAEEMSVCLLRNLDGKVVLPENLLAFSFYGKLCNVVVMKVKGTD 170
Query: 164 AVEGQEKSNAL 174
+VE ++ A+
Sbjct: 171 SVELHAQAGAI 181
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 375 (137.1 bits), Expect = 4.9e-36, Sum P(2) = 4.9e-36
Identities = 97/260 (37%), Positives = 144/260 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL + +I + V P + LGI KG+LLYGPPGTGKTL+AR +
Sbjct: 145 VGGLDKQIQEI-KEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTEC 203
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V+G E++ KF+GE + +R+LF A + +I DEID+I GS
Sbjct: 204 TFIR-VSGSELVQKFIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSI----GS 250
Query: 341 TRDGTGVHDSIVN----QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R TG DS V +LL ++DG E+ N+ +I TNR D+LD+ALLRPGR++ ++E
Sbjct: 251 ARLETGTGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEF 310
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
P+E RL IL+IH+ KM L +NL+++A SGAE++GV A +AL
Sbjct: 311 PPPNEEARLDILKIHSRKMN----LTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRE 366
Query: 457 Q---LSMDDLTKPVDEESIK 473
+ ++ +D V + +K
Sbjct: 367 RRVHVTQEDFEMAVSKVMMK 386
Score = 44 (20.5 bits), Expect = 4.9e-36, Sum P(2) = 4.9e-36
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 14 TMNVIN-TPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDS 57
T+N+ + TPS+ +AL N +Y L N P +L L DS
Sbjct: 96 TINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEKVPDS 140
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 416 (151.5 bits), Expect = 9.6e-36, P = 9.6e-36
Identities = 102/269 (37%), Positives = 154/269 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IG L + + + A + V P + +LG+ G+LL GPPG GKTL+A+ I G
Sbjct: 664 IGALE-KIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEA-G 721
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V GPE+++ +VGE+E+ +R F QR R S VI FDE D++C R
Sbjct: 722 INFISVKGPELMNMYVGESERAVRACF------QRARN--SAPCVIFFDEFDSLCPKRSD 773
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPD 400
DG IVNQLLT++DGVE V ++ TNR D++D A+LRPGRL+ + + P+
Sbjct: 774 GGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPE 833
Query: 401 ENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSM 460
++ R +IL+ T K + LA DV+L E+AA+T+ Y+GA+L G+ K A F+L + L+
Sbjct: 834 QSERTEILKA-TTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQSLNN 892
Query: 461 DDLTKPVDEESIKVTMDDFLHALYEIVPA 489
D +D+ + V F AL ++ P+
Sbjct: 893 GDTN--LDD--LCVRSQHFQEALQQLRPS 917
Score = 258 (95.9 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 81/265 (30%), Positives = 134/265 (50%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGG+ + ++ + P +LG+ +G+LL+GPPG GKT +AR I L
Sbjct: 253 IGGMDSTLKELCEMLI--HIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLK- 309
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG- 339
M + E++ GE+E+ IR++F DQ V+ DEIDAI +R
Sbjct: 310 MPLMEIPATELIGGISGESEERIREVF-----DQAIGYSPC---VLFIDEIDAIGGNRQW 361
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLN---NVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
+++D + IV+QL++ +D +++ +V++I T R D+LD L R GR + ++ I
Sbjct: 362 ASKD---MERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAI 418
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+P R +IL+I E + P +N ++A T Y GA+L + A S A+ R
Sbjct: 419 HIPSRKERREILRIQC----EGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKR 474
Query: 457 QLSMD---DLTKPVDEESIKVTMDD 478
+ SM +L ++ VT+DD
Sbjct: 475 R-SMKKFRELHAASEKNMTTVTLDD 498
Score = 57 (25.1 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 522 LVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESM 571
++E++ ++ S ++ C GP G GKT LA ++ F+ + E M
Sbjct: 687 MLERLGLTAPSGVLLC---GPPGCGKTLLAKAIANEAGINFISVKGPELM 733
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 418 (152.2 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 121/379 (31%), Positives = 193/379 (50%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG+ + A I + + P + +G+K +G+LL+GPPGTGKTL+AR + G
Sbjct: 211 LGGVRKQLAQI-KEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANE-TG 268
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++NGPE++SK GE+E N+R FA+ E + ++ DEIDAI R
Sbjct: 269 AFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPA--------ILFIDEIDAIAPKREK 320
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPD 400
G V IV+QLLT +DG+++ +V++I TNR + +D AL R GR + +++I +PD
Sbjct: 321 AH-GE-VEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPD 378
Query: 401 ENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSM 460
GRL+IL+IHT MK L DV+L+++A + GA+L + A + ++ +
Sbjct: 379 AVGRLEILRIHTKNMK----LGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMEL 434
Query: 461 DDLTKP-VDEE---SIKVTMDDFLHALYEIVPAF----GASTDDLERSRLNGMVDCGDRH 512
DL +D E S+ VTM++F A+ + P+ T + S + G+ +
Sbjct: 435 IDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKREL 494
Query: 513 KHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESM- 571
+ + Q + E+ P L GP G GKT LA + F+ I E +
Sbjct: 495 QELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 554
Query: 572 IGLHESTKCAQIVKVFEDA 590
+ ES A + VF+ A
Sbjct: 555 MWFGESE--ANVRDVFDKA 571
Score = 377 (137.8 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 87/220 (39%), Positives = 127/220 (57%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P K G++ +G+L YGPPG GKTL+A+ I I GPE+L+ + GE+E N
Sbjct: 505 PEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 563
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG-STRDGTGVHDSIVNQLLTKIDG 361
+RD+F A R V+ FDE+D+I K+RG S D G D ++NQ+LT++DG
Sbjct: 564 VRDVFDKA----RAAAPC----VLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDG 615
Query: 362 VESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFL 421
+ + NV +IG TNR D++D A+LRPGRL+ + I LPDE RLQI + K L
Sbjct: 616 MNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTP----L 671
Query: 422 APDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMD 461
+ D++L LA T +SGA+L + + A A+ + +
Sbjct: 672 SADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIERE 711
Score = 39 (18.8 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 57 SFVLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLN 94
S VL+ + P+ +I +N V R + + GD VS++
Sbjct: 75 SIVLNADNCPN---DKIKMNKVVRNNLRSRLGDVVSIS 109
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 418 (152.2 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 121/379 (31%), Positives = 193/379 (50%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG+ + A I + + P + +G+K +G+LL+GPPGTGKTL+AR + G
Sbjct: 211 LGGVRKQLAQI-KEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANE-TG 268
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++NGPE++SK GE+E N+R FA+ E + ++ DEIDAI R
Sbjct: 269 AFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPA--------ILFIDEIDAIAPKREK 320
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPD 400
G V IV+QLLT +DG+++ +V++I TNR + +D AL R GR + +++I +PD
Sbjct: 321 AH-GE-VEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPD 378
Query: 401 ENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSM 460
GRL+IL+IHT MK L DV+L+++A + GA+L + A + ++ +
Sbjct: 379 AVGRLEILRIHTKNMK----LGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMEL 434
Query: 461 DDLTKP-VDEE---SIKVTMDDFLHALYEIVPAF----GASTDDLERSRLNGMVDCGDRH 512
DL +D E S+ VTM++F A+ + P+ T + S + G+ +
Sbjct: 435 IDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKREL 494
Query: 513 KHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESM- 571
+ + Q + E+ P L GP G GKT LA + F+ I E +
Sbjct: 495 QELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 554
Query: 572 IGLHESTKCAQIVKVFEDA 590
+ ES A + VF+ A
Sbjct: 555 MWFGESE--ANVRDVFDKA 571
Score = 377 (137.8 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 87/220 (39%), Positives = 127/220 (57%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P K G++ +G+L YGPPG GKTL+A+ I I GPE+L+ + GE+E N
Sbjct: 505 PEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 563
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG-STRDGTGVHDSIVNQLLTKIDG 361
+RD+F A R V+ FDE+D+I K+RG S D G D ++NQ+LT++DG
Sbjct: 564 VRDVFDKA----RAAAPC----VLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDG 615
Query: 362 VESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFL 421
+ + NV +IG TNR D++D A+LRPGRL+ + I LPDE RLQI + K L
Sbjct: 616 MNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTP----L 671
Query: 422 APDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMD 461
+ D++L LA T +SGA+L + + A A+ + +
Sbjct: 672 SADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIERE 711
Score = 39 (18.8 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 57 SFVLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLN 94
S VL+ + P+ +I +N V R + + GD VS++
Sbjct: 75 SIVLNADNCPN---DKIKMNKVVRNNLRSRLGDVVSIS 109
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 412 (150.1 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 124/403 (30%), Positives = 192/403 (47%)
Query: 177 GIITNETYFVFEASNDSGIKIVNQREGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAF 236
G +N F F +S +N R+ ++ + +F + IGGL+++ I R
Sbjct: 315 GTKSNTDTFYFISSTTR----INLRKICTNSKEQDSQFKVTYDMIGGLNSQLKAI-REII 369
Query: 237 ASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFV 296
+ P + GI +G+LLYGPPGTGKT++AR + + G ++NGPE++SKF
Sbjct: 370 ELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEV-GAYVSVINGPEIISKFY 428
Query: 297 GETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLL 356
GETE +R +FA+A T S +I DE+DA+C R + + V +V LL
Sbjct: 429 GETEARLRQIFAEA-----TLRHPS---IIFIDELDALCPKREGAQ--SEVEKRVVASLL 478
Query: 357 TKIDGVESLNN---VLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTN 413
T +DG+ S + VL++G TNR LD AL RPGR + ++EI +P+ RL ILQ
Sbjct: 479 TLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQ---K 535
Query: 414 KMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL-SMDDLTKPVDEESI 472
++ L L LA Y GA+L+ + A AL R L +L +
Sbjct: 536 LLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPNLPDSKVAGMV 595
Query: 473 KVTMDDFLHALYEIVPA----FGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKV 528
K+T++DFL + +I P+ ++ S + G+ + + K + + +
Sbjct: 596 KITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNR 655
Query: 529 SKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESM 571
P LL GP G KT +A +S F+ I E M
Sbjct: 656 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELM 698
Score = 392 (143.0 bits), Expect = 3.9e-33, P = 3.9e-33
Identities = 87/246 (35%), Positives = 143/246 (58%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P +++GI+ KG+LLYGPPG KT++A+ + +G+ + GPE+++K+VGE+E+
Sbjct: 650 PKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANE-SGLNFLAIKGPELMNKYVGESERA 708
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R++F A R +I FDE+DA+ RGS+ V D ++ QLLT++DG+
Sbjct: 709 VREIFRKA----RAVAPS----IIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGI 760
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLA 422
E L NV ++ TNR D +D+AL+RPGR++ + + LPD R +IL + + M ++
Sbjct: 761 EQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMP----IS 816
Query: 423 PDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVT---MDDF 479
+V+L EL +T YSGAE+ V K A AL + D + K +++ + + +
Sbjct: 817 NEVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKADCIMKRHFTQALSIVTPRIPES 876
Query: 480 LHALYE 485
L YE
Sbjct: 877 LRRFYE 882
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 412 (150.1 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 131/391 (33%), Positives = 198/391 (50%)
Query: 212 KEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKT 268
+E +L +G IGG + A I + + P + +G+K +G+LLYGPPGTGKT
Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 252
Query: 269 LMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
L+AR + G ++NGPE++SK GE E R + A +T G IF
Sbjct: 253 LIARAVANE-TGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAG--------IF 303
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
D C T G V IV+QLLT +DG++ +V+++ TNR + +D AL R G
Sbjct: 304 KSDD--CFPSPQTH-GE-VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 359
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + +V+I +PD GRL+ILQIHT MK LA DV+L+++A T + GA+L +
Sbjct: 360 RFDREVDIGIPDATGRLEILQIHTKNMK----LADDVDLEQVANETHGHVGADLAALCSE 415
Query: 449 AVSFALNRQLSMDDLT-KPVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSRLN 503
A A+ +++ + DL + +D E S+ VTMDDF AL + P A + ++ +
Sbjct: 416 AALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWE 475
Query: 504 GMVDCGDRHKHIYQRAMLLVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSDF 560
+ D + + + VE K K G +P L GP G GKT LA +
Sbjct: 476 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 535
Query: 561 PFVKIISAESM-IGLHESTKCAQIVKVFEDA 590
F+ I E + + ES A + ++F+ A
Sbjct: 536 NFISIKGPELLTMWFGESE--ANVREIFDKA 564
Score = 392 (143.0 bits), Expect = 5.3e-33, Sum P(2) = 5.3e-33
Identities = 98/265 (36%), Positives = 147/265 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFP---PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKM 277
IGGL D+ R +P P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 477 IGGLE----DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 532
Query: 278 LNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS 337
I GPE+L+ + GE+E N+R++F A Q+ V+ FDE+D+I K+
Sbjct: 533 CQANFISI-KGPELLTMWFGESEANVREIFDKAR--------QAAPCVLFFDELDSIAKA 583
Query: 338 RGST-RDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
RG DG G D ++NQ+LT++DG+ + NV +IG TNR D++D A+LRPGRL+ + I
Sbjct: 584 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 643
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LPDE R+ IL+ + K S +A DV+L LA T +SGA+L + + A A+
Sbjct: 644 PLPDEKSRVAILKANLRK----SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 699
Query: 457 QLSMD---DLTKPVDEESIKVTMDD 478
+ + + + + +++V DD
Sbjct: 700 SIESEIRRERERQTNPSAMEVEEDD 724
Score = 43 (20.2 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 16/70 (22%), Positives = 31/70 (44%)
Query: 24 DLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIALNSVQRRHA 83
D ++ +L+ +L FR + L V + S + + +I +N V R +
Sbjct: 35 DNSVVSLSQAKMDELQLFR--GDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNL 92
Query: 84 KVSTGDHVSL 93
+V GD +S+
Sbjct: 93 RVRLGDVISI 102
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 410 (149.4 bits), Expect = 2.6e-35, P = 2.6e-35
Identities = 109/359 (30%), Positives = 180/359 (50%)
Query: 216 LQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIG 275
L +GGL E + + A + P + S G+ +G+LL+GPPGTGKT++ R +
Sbjct: 242 LSYAAVGGLDKEIESL-KSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVA 300
Query: 276 KMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAIC 335
N +NGP ++SK++GETE +RD+F +A Q + +I DEID+I
Sbjct: 301 NTSNA-HVLTINGPSIVSKYLGETEAALRDIFNEARKYQPS--------IIFIDEIDSIA 351
Query: 336 KSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVE 395
+R + G V +V LLT +DG+ + V++I TNR + +D AL RPGR + +VE
Sbjct: 352 PNRANDDSGE-VESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVE 410
Query: 396 ISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN 455
I +PD + R IL ++M + + ++ +A++T Y GA+L + + +V +
Sbjct: 411 IGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQ 470
Query: 456 RQLSMDDLTKPVDEESIKVTMDDFLHALYEIVP-AFGASTDDLER---SRLNGMVDCGDR 511
R L D +D+ S+KVT+ D A+ +I P A ++ + S + G + +
Sbjct: 471 RGLGTD---ANIDKFSLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTK 527
Query: 512 HKHIYQRAMLLVEQ-VKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAE 569
K + Q + E ++ +P LL GP G KT A +S F+ + E
Sbjct: 528 MKEMIQLPLEASETFARLGISAPKGV-LLYGPPGCSKTLTAKALATESGINFLAVKGPE 585
Score = 360 (131.8 bits), Expect = 9.8e-30, P = 9.8e-30
Identities = 85/214 (39%), Positives = 123/214 (57%)
Query: 247 SKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDL 306
++LGI KG+LLYGPPG KTL A+ + +G+ V GPE+ +K+VGE+E+ IR++
Sbjct: 543 ARLGISAPKGVLLYGPPGCSKTLTAKALATE-SGINFLAVKGPEIFNKYVGESERAIREI 601
Query: 307 FADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLN 366
F A + + +I FDEIDA+ R + H ++ LL +IDGVE L
Sbjct: 602 FRKARSAAPS--------IIFFDEIDALSPDRDGSSTSAANH--VLTSLLNEIDGVEELK 651
Query: 367 NVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVN 426
V+++ TNR D +D ALLRPGRL+ + + PD N RL+IL+ T K V+
Sbjct: 652 GVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEE---SGVD 708
Query: 427 LQELAARTKNYSGAELEGVAKSAVSFALNRQLSM 460
L ELA RT+ YSGAE+ + + A A+ L +
Sbjct: 709 LHELADRTEGYSGAEVVLLCQEAGLAAIMEDLDV 742
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 416 (151.5 bits), Expect = 2.8e-35, Sum P(2) = 2.8e-35
Identities = 125/419 (29%), Positives = 197/419 (47%)
Query: 161 NGAAVEGQEKSNALERGIITNETYFVFEASNDSGIKIVNQREGANSNIFRHKEFNLQSLG 220
N + ++ + G N F F +S +N R+ ++ + +F +
Sbjct: 299 NTQPISEEKLLKSTSAGAKNNTDTFYFISSTTR----INLRKICTNSKEQDSQFKVTYDM 354
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL+++ I R + P + GI +G+LLYGPPGTGKT++AR + + G
Sbjct: 355 IGGLNSQLKAI-REIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEV-G 412
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++NGPE++SKF GETE +R +FA+A T S +I DE+DA+C R
Sbjct: 413 AYVSVINGPEIISKFYGETEARLRQIFAEA-----TLRHPS---IIFIDELDALCPKREG 464
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNN---VLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
+ + V +V LLT +DG+ S + VL++G TNR LD AL RPGR + ++EI
Sbjct: 465 AQ--SEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIG 522
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
+P+ RL ILQ ++ L L LA Y GA+L+ + A +AL R
Sbjct: 523 IPNAQDRLDILQ---KLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYALRRV 579
Query: 458 L-SMDDLTKPVDEESIKVTMDDFLHALYEIVPA----FGASTDDLERSRLNGMVDCGDRH 512
L +L +K+T++DFL + +I P+ ++ S + G+ + +
Sbjct: 580 LRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKL 639
Query: 513 KHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESM 571
K + + + P LL GP G KT +A +S F+ I E M
Sbjct: 640 KQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELM 698
Score = 266 (98.7 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 55/142 (38%), Positives = 89/142 (62%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P S++GI+ KG+LLYGPPG KT++A+ + +G+ + GPE+++K+VGE+E+
Sbjct: 650 PKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANE-SGLNFLAIKGPELMNKYVGESERA 708
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R++F A R +I FDE+DA+ RGS+ V D ++ QLLT++DG+
Sbjct: 709 VREVFRKA----RAVAPS----IIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGI 760
Query: 363 ESLNNVLLIGMTNRKDMLDEAL 384
E L NV ++ TNR D +D+ +
Sbjct: 761 EQLKNVTVLAATNRPDRIDKII 782
Score = 39 (18.8 bits), Expect = 2.8e-35, Sum P(2) = 2.8e-35
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 548 TALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVK 585
T LAAT D + + +++ L E+ K I+K
Sbjct: 767 TVLAATNRPDRIDKIIAVCKEAALLALEENIKADCIMK 804
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 410 (149.4 bits), Expect = 2.9e-35, P = 2.9e-35
Identities = 122/383 (31%), Positives = 187/383 (48%)
Query: 221 IGGLSAEFADIFRRAFASRVFP-PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLN 279
IGGL A+ A I R F P + I +G+LLYGPPGTGKT++ R + N
Sbjct: 281 IGGLQAQIAQI--RDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEAN 338
Query: 280 GMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG 339
+ ++GP V+ K++GETE +R +F DA Q + +I DEIDA+ R
Sbjct: 339 A-QVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPS--------IIFIDEIDALAPKR- 388
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
T D + V LLT +DG+ + V++I TNR + +DEAL RPGRLE ++EI +P
Sbjct: 389 -TEDVSEAESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIP 447
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLS 459
D++ RL I+++ + + D L++LA+RT Y GA+L V + A A+ R +S
Sbjct: 448 DKSARLDIIKLLLSGVPNE---INDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTIS 504
Query: 460 MDDLTKPVDEESIKVTMDDFLHALYEI----VPAFGASTDDLERSRLNGMVDCGDRHKHI 515
+ T +D V MDD AL + + F + ++ S + G + + K
Sbjct: 505 LQKDTSGLDIFGA-VQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKES 563
Query: 516 YQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAE---SMI 572
+ + E P LL GP G KT A ++ F+ + E +
Sbjct: 564 VEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFV 623
Query: 573 GLHESTKCAQIVKVFEDAYK-SP 594
G ES + + +VF+ A + SP
Sbjct: 624 G--ESERAVR--QVFQKARQASP 642
Score = 377 (137.8 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 103/313 (32%), Positives = 166/313 (53%)
Query: 151 YHGNNYIFTVNGAAVEGQEKSNALERGIITNETYFVFEASNDSGIKIVNQREGANSNIFR 210
Y G + V AA+ +++ +L++ + + + +D + + R+ A F
Sbjct: 482 YVGADLAAVVREAALRAIKRTISLQKDTSGLDIFGAVQM-DDLEFALSSVRQSAMRE-FM 539
Query: 211 HKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLM 270
+ N+ IGG E + + + S+LG++ KG+LLYGPPG KT+
Sbjct: 540 MESPNVHWSDIGG-QEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTIT 598
Query: 271 ARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDE 330
A+ I G+ V GPE+ KFVGE+E+ +R +F Q+ R Q+ VI FDE
Sbjct: 599 AKAIATE-TGLNFIAVKGPELFDKFVGESERAVRQVF------QKAR--QASPSVIFFDE 649
Query: 331 IDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRL 390
IDA+ +RG D + D +V LL ++DG+E+L NVL++ TNR DM+D AL+RPGRL
Sbjct: 650 IDALTANRGE--DNSS--DRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRL 705
Query: 391 EVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAV 450
+ + + P+ R QI++I KMK A DV+L +A +T+ SGAE+ + + A
Sbjct: 706 DRLLYVGPPNFEARKQIVKIQAEKMK----FAEDVDLDLIAEKTEGCSGAEVVALCQEAG 761
Query: 451 SFALNRQLSMDDL 463
A++ L ++
Sbjct: 762 LIAMHEDLEAKEI 774
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 409 (149.0 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 134/424 (31%), Positives = 199/424 (46%)
Query: 163 AAVEGQEKSNALER------GIITNETYFVFEASNDSGIKIVNQREGANSNIFRHKEFNL 216
+A EG E+ ER G N F F +S VN E ++ + +F +
Sbjct: 295 SAREGNEQLTEEERLLKFSIGAKCNTDTFYFISSTTR----VNFTEIDKNSKEQDNQFKV 350
Query: 217 QSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGK 276
IGGLS++ I R + P + GI +G+LLYGPPGTGKT++AR +
Sbjct: 351 TYDMIGGLSSQLKAI-REIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 277 MLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
+ G ++NGPE++SKF GETE +R +FA+A T S +I DE+DA+C
Sbjct: 410 EV-GAYVSVINGPEIISKFYGETEAKLRQIFAEA-----TLRHPS---IIFIDELDALCP 460
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESL---NNVLLIGMTNRKDMLDEALLRPGRLEVQ 393
R ++ V +V LLT +DG+ S VL++G TNR LD AL RPGR + +
Sbjct: 461 KREGAQNE--VEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKE 518
Query: 394 VEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFA 453
+EI +P+ RL ILQ ++ L + L +LA Y GA+L+ + A A
Sbjct: 519 IEIGVPNAQDRLDILQ---KLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCA 575
Query: 454 LNRQLSMDDLTKPVDEES-IKVTMDDFLHALYEIVPA----FGASTDDLERSRLNGMVDC 508
L R L V +K+T+ DFL A+ +I P+ ++ S + G+
Sbjct: 576 LRRILKKQPNLPDVKVAGLVKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESI 635
Query: 509 GDRHKHIYQRAMLLVEQVKVSKG-SPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIIS 567
+ + + + E + G P LL GP G KT +A +S F+ I
Sbjct: 636 KLKLEQAVEWPLKHPESF-IRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKG 694
Query: 568 AESM 571
E M
Sbjct: 695 PELM 698
Score = 367 (134.2 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 86/251 (34%), Positives = 143/251 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ IGGL + + +A + P ++GI+ KG+LLYGPPG KT++A+ +
Sbjct: 623 NVSWSDIGGLESIKLKL-EQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKAL 681
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
+G+ + GPE+++K+VGE+E+ +R+ F A R +I FDE+DA+
Sbjct: 682 ANE-SGLNFLAIKGPELMNKYVGESERAVRETFRKA----RAVAPS----IIFFDELDAL 732
Query: 335 CKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQV 394
RGS+ V D ++ QLLT++DG+E L +V ++ TNR D +D+AL+RPGR++ +
Sbjct: 733 AVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRII 792
Query: 395 EISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFAL 454
+ LPD R +I ++ + M ++ +V+L EL +T YSGAE+ V + A AL
Sbjct: 793 YVPLPDAATRREIFKLQFHSMPVSN----EVDLDELILQTDAYSGAEIVAVCREAALLAL 848
Query: 455 NRQLSMDDLTK 465
+ + + K
Sbjct: 849 EEDIQANLIMK 859
Score = 48 (22.0 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 21/119 (17%), Positives = 49/119 (41%)
Query: 48 LFLASVAGDSFVLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALL 107
+ L S+ G V + G++ L+ + +++ V GD + + + A+L
Sbjct: 86 VLLTSLNGKQEVYTAWPMAGFPGGKVGLSEMAQKNVGVRPGDAIQVQPLVG------AVL 139
Query: 108 TVELEFVKKGSKNEQVDAVLLANQLRKRFINQVMTAGQRVVFEYHGNNY---IFTVNGA 163
E V K+ +++ L + ++ +++ G + ++G Y + V GA
Sbjct: 140 QAEEMDVALSDKDMEINEEELTGCILRKLDGKIVLPGNFLYCTFYGRPYKLQVLRVKGA 198
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 392 (143.0 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 98/265 (36%), Positives = 147/265 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFP---PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKM 277
IGGL D+ R +P P K G+ KG+L YGPPG GKTL+A+ I
Sbjct: 211 IGGLE----DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 266
Query: 278 LNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS 337
I GPE+L+ + GE+E N+R++F A Q+ V+ FDE+D+I K+
Sbjct: 267 CQANFISI-KGPELLTMWFGESEANVREIFDKAR--------QAAPCVLFFDELDSIAKA 317
Query: 338 RGST-RDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
RG DG G D ++NQ+LT++DG+ + NV +IG TNR D++D A+LRPGRL+ + I
Sbjct: 318 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 377
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LPDE R+ IL+ + K S +A DV+L LA T +SGA+L + + A A+
Sbjct: 378 PLPDEKSRVAILKANLRK----SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 433
Query: 457 QLSMD---DLTKPVDEESIKVTMDD 478
+ + + + + +++V DD
Sbjct: 434 SIESEIRRERERQTNPSAMEVEEDD 458
Score = 357 (130.7 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 106/313 (33%), Positives = 163/313 (52%)
Query: 287 NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTG 346
+GPE++SK GE+E N+R F +AE + +I DE+DAI R T G
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPA--------IIFIDELDAIAPKREKTH-GE- 51
Query: 347 VHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQ 406
V IV+QLLT +DG++ +V+++ TNR + +D AL R GR + +V+I +PD GRL+
Sbjct: 52 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 111
Query: 407 ILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLT-K 465
ILQIHT MK LA DV+L+++ T + GA+L + A A+ +++ + DL +
Sbjct: 112 ILQIHTKNMK----LADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDE 167
Query: 466 PVDEE---SIKVTMDDFLHALYEIVP-AFGASTDDLERSRLNGMVDCGDRHKHIYQRAML 521
+D E S+ VTMDDF AL + P A + ++ + + D + + +
Sbjct: 168 TIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQY 227
Query: 522 LVEQV-KVSK-G-SPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESM-IGLHES 577
VE K K G +P L GP G GKT LA + F+ I E + + ES
Sbjct: 228 PVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 287
Query: 578 TKCAQIVKVFEDA 590
A + ++F+ A
Sbjct: 288 E--ANVREIFDKA 298
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 402 (146.6 bits), Expect = 1.6e-34, P = 1.6e-34
Identities = 92/216 (42%), Positives = 128/216 (59%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P + GI G+LLYGPPG KTL+AR + M V GPE+ SK+VG++EK
Sbjct: 482 PEAFERFGIDPPAGILLYGPPGCSKTLIARALASEAK-MNFLAVKGPELFSKWVGDSEKA 540
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
IRDLF+ A T ++ FDEIDA+ SRGS + +GV D ++ QLLT++DG+
Sbjct: 541 IRDLFSRARQVAPT--------IVFFDEIDAVGSSRGSEKS-SGVSDRVLAQLLTELDGL 591
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLA 422
E + V+L+ TNR D LD ALLRPGRL+ + + LP E R IL++ T KMK + +
Sbjct: 592 EKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGLPCEVTRRAILEMRTKKMKFDDTVR 651
Query: 423 PDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
+ +L +T YSGAEL V ++A FA+ +
Sbjct: 652 ---TIDKLVEKTSGYSGAELVAVCRTAAMFAMRESI 684
>WB|WBGene00008682 [details] [associations]
symbol:lex-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0007126 "meiosis" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0009792 GO:GO:0008406 GO:GO:0006351
eggNOG:COG0464 GO:GO:0017111 GO:GO:0045132 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:Z68297
EMBL:Z68316 EMBL:DQ140399 PIR:T20739 RefSeq:NP_001122768.1
RefSeq:NP_001122769.1 RefSeq:NP_502289.2 UniGene:Cel.6917
ProteinModelPortal:P54816 SMR:P54816 STRING:P54816 PaxDb:P54816
EnsemblMetazoa:F11A10.1a.1 EnsemblMetazoa:F11A10.1a.2 GeneID:178146
KEGG:cel:CELE_F11A10.1 UCSC:F11A10.1a CTD:178146 WormBase:F11A10.1a
WormBase:F11A10.1b WormBase:F11A10.1c GeneTree:ENSGT00550000074694
HOGENOM:HOG000154515 InParanoid:P54816 OMA:QDETENG NextBio:899910
GO:GO:0031445 Uniprot:P54816
Length = 1291
Score = 404 (147.3 bits), Expect = 3.9e-34, P = 3.9e-34
Identities = 106/276 (38%), Positives = 148/276 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL + ++P V K I KG++ YGPPGTGKTL+AR +
Sbjct: 393 VGGLGHHIQSLKEVVLFPMLYP-EVFEKFRINPPKGVVFYGPPGTGKTLVARALANECRR 451
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
K+ G + LSK+VGE+E+ +R LF DQ S +I FDEID +
Sbjct: 452 GANKVAFFMRKGADCLSKWVGESERQLRLLF-----DQAYAMRPS---IIFFDEIDGLAP 503
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG++ V++IG TNR D LD AL RPGR + ++
Sbjct: 504 VRSSKQDQ--IHASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRF 561
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
SLPD N R QIL IHT+K +EN + P+ L +A RT Y GA+L+ + AV L
Sbjct: 562 SLPDLNARRQILDIHTSKWEENKPI-PET-LDAIAERTSGYCGADLKFLCTEAVLIGLRS 619
Query: 457 Q---LSMDDLTKPVDEESIKVTMDDFLHALYEIVPA 489
+ + M +D +IK+T + F HA+ I PA
Sbjct: 620 RYPHIYMCSERLKLDVATIKITSEHFGHAMRRITPA 655
>UNIPROTKB|P54816 [details] [associations]
symbol:lex-1 "Tat-binding homolog 7" species:6239
"Caenorhabditis elegans" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0031445 "regulation of heterochromatin assembly" evidence=IMP]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0009792 GO:GO:0008406 GO:GO:0006351
eggNOG:COG0464 GO:GO:0017111 GO:GO:0045132 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:Z68297
EMBL:Z68316 EMBL:DQ140399 PIR:T20739 RefSeq:NP_001122768.1
RefSeq:NP_001122769.1 RefSeq:NP_502289.2 UniGene:Cel.6917
ProteinModelPortal:P54816 SMR:P54816 STRING:P54816 PaxDb:P54816
EnsemblMetazoa:F11A10.1a.1 EnsemblMetazoa:F11A10.1a.2 GeneID:178146
KEGG:cel:CELE_F11A10.1 UCSC:F11A10.1a CTD:178146 WormBase:F11A10.1a
WormBase:F11A10.1b WormBase:F11A10.1c GeneTree:ENSGT00550000074694
HOGENOM:HOG000154515 InParanoid:P54816 OMA:QDETENG NextBio:899910
GO:GO:0031445 Uniprot:P54816
Length = 1291
Score = 404 (147.3 bits), Expect = 3.9e-34, P = 3.9e-34
Identities = 106/276 (38%), Positives = 148/276 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL + ++P V K I KG++ YGPPGTGKTL+AR +
Sbjct: 393 VGGLGHHIQSLKEVVLFPMLYP-EVFEKFRINPPKGVVFYGPPGTGKTLVARALANECRR 451
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
K+ G + LSK+VGE+E+ +R LF DQ S +I FDEID +
Sbjct: 452 GANKVAFFMRKGADCLSKWVGESERQLRLLF-----DQAYAMRPS---IIFFDEIDGLAP 503
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG++ V++IG TNR D LD AL RPGR + ++
Sbjct: 504 VRSSKQDQ--IHASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRF 561
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
SLPD N R QIL IHT+K +EN + P+ L +A RT Y GA+L+ + AV L
Sbjct: 562 SLPDLNARRQILDIHTSKWEENKPI-PET-LDAIAERTSGYCGADLKFLCTEAVLIGLRS 619
Query: 457 Q---LSMDDLTKPVDEESIKVTMDDFLHALYEIVPA 489
+ + M +D +IK+T + F HA+ I PA
Sbjct: 620 RYPHIYMCSERLKLDVATIKITSEHFGHAMRRITPA 655
>SGD|S000003502 [details] [associations]
symbol:YTA7 "Protein that localizes to chromatin and
regulates histone expression" species:4932 "Saccharomyces
cerevisiae" [GO:0042393 "histone binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IMP;IDA]
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 SGD:S000003502
GO:GO:0005524 GO:GO:0005634 EMBL:BK006941 GO:GO:0045944
GO:GO:0003682 GO:GO:0000122 GO:GO:0031936 eggNOG:COG0464
GO:GO:0017111 GO:GO:0042393 GO:GO:0042406 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 EMBL:Y07893 EMBL:X81072
GeneTree:ENSGT00550000074694 EMBL:Z73055 PIR:S64603
RefSeq:NP_011786.1 ProteinModelPortal:P40340 SMR:P40340
DIP:DIP-6557N IntAct:P40340 MINT:MINT-629064 STRING:P40340
PaxDb:P40340 EnsemblFungi:YGR270W GeneID:853186 KEGG:sce:YGR270W
CYGD:YGR270w HOGENOM:HOG000157282 OMA:YPELYQN OrthoDB:EOG473T0K
NextBio:973329 Genevestigator:P40340 GermOnline:YGR270W
Uniprot:P40340
Length = 1379
Score = 406 (148.0 bits), Expect = 6.2e-34, Sum P(2) = 6.2e-34
Identities = 108/291 (37%), Positives = 156/291 (53%)
Query: 213 EFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMAR 272
+ N+ IGGL + D + A + P + I +G+L +GPPGTGKTLMAR
Sbjct: 407 DMNVNFDDIGGLD-NYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMAR 465
Query: 273 QIGKMLNGMEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
+ + E KI G ++LSK+VGE E+ +R LF +A+ Q + +I F
Sbjct: 466 ALAASCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPS--------IIFF 517
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DEID + R S ++ +H SIV+ LL +DG+++ V++IG TNR D +D AL RPG
Sbjct: 518 DEIDGLAPVRSSKQEQ--IHASIVSTLLALMDGMDNRGQVIVIGATNRPDAVDPALRRPG 575
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + + LPD R +ILQI T K +S L+ + + +LA TK Y GA+L +
Sbjct: 576 RFDREFYFPLPDVKARFKILQIQTRKW--SSPLSTNF-IDKLAFLTKGYGGADLRSLCTE 632
Query: 449 AVSFALNRQL-----SMDDLTKPVDEESIKVTMDDFLHALYEIVPAFGAST 494
A ++ R S D L VD IKV + DF+ AL +IVP+ ST
Sbjct: 633 AALISIQRSFPQIYRSNDKLL--VDPSKIKVKVSDFMLALKKIVPSSARST 681
Score = 46 (21.3 bits), Expect = 6.2e-34, Sum P(2) = 6.2e-34
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 538 LLEGPSGSGKTAL-AATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYK 592
L+ GP G+G+ + AA +F V+ + S++ T A +V+ F +A K
Sbjct: 773 LINGPKGNGQQYVGAAILNYLEEFN-VQNLDLASLVSESSRTIEAAVVQSFMEAKK 827
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 395 (144.1 bits), Expect = 9.4e-34, Sum P(2) = 9.4e-34
Identities = 85/221 (38%), Positives = 137/221 (61%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P ++GIK KG+LLYGPPG KTL+A+ + +G+ V GPE+LSK+VGE+E+
Sbjct: 645 PQSFIRMGIKPPKGILLYGPPGCSKTLLAKALATE-SGLNFIAVKGPELLSKWVGESERA 703
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+RD+F A Q+ ++ FDEID + SR +G+G + +V+QLLT++DG+
Sbjct: 704 VRDIFKKAR--------QNSPSILFFDEIDGLAISRSG--EGSGAVERVVSQLLTEMDGI 753
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLA 422
+ L NV +IG TNR D++D+A+LR GR++ + IS PD + R +I IH K+ +S
Sbjct: 754 QPLTNVTIIGATNRPDIIDKAILRAGRIDRILYISPPDLDARKEIFNIHLKKVPHSS--- 810
Query: 423 PDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDL 463
D+++ +L+ T YSGAE+ + + A A+ ++ ++
Sbjct: 811 -DIDINQLSILTDGYSGAEVTSICREASIAAMKEDINAKEI 850
Score = 314 (115.6 bits), Expect = 8.4e-27, Sum P(3) = 8.4e-27
Identities = 90/269 (33%), Positives = 135/269 (50%)
Query: 199 NQREGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGML 258
N +N+ I +K NL IGGL + I R + + G+K KG+L
Sbjct: 292 NNNNNSNNKIDNNKNINLNFQSIGGLDLQVKQI-RELIDLSFYKLDLLKSFGVKPPKGIL 350
Query: 259 LYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRG 318
LYGPPGTGKTL+AR + N I NG ++L KF G TEK ++ +F DA +
Sbjct: 351 LYGPPGTGKTLLARIVATQTNATLFTI-NGADILDKFYGMTEKTLQKIFKDAAQKSPSII 409
Query: 319 DQSDLHVII------FDEIDA-ICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLN----N 367
+L + E++ I S + DG V S N +G + N
Sbjct: 410 FIDELDALCPKREDNSSEVEKRIVGSLLTLMDGV-VSTSDQNDGGGGDNGNGNGNCGGDK 468
Query: 368 VLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNL 427
V++IG TNR D +D AL RPGR + ++EIS+P++ GR QIL I +K+ N + ++ +
Sbjct: 469 VIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIP-NQLTSQEIAM 527
Query: 428 QELAARTKNYSGAELEGVAKSAVSFALNR 456
+A++T + GA++E + K A NR
Sbjct: 528 --IASKTHGFVGADIESLCKEASLKCFNR 554
Score = 64 (27.6 bits), Expect = 8.4e-27, Sum P(3) = 8.4e-27
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 472 IKVTMDDFLHALYEIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVE------Q 525
IK++M+D L AL ++ P+ +E ++ D G + +HI Q+ +E Q
Sbjct: 590 IKLSMNDMLLALNQVKPSSMREVV-VEIPKVF-WGDIGGQ-EHIKQKLKEAIEWPLKYPQ 646
Query: 526 VKVSKG-SPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAE 569
+ G P LL GP G KT LA +S F+ + E
Sbjct: 647 SFIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPE 691
Score = 49 (22.3 bits), Expect = 9.4e-34, Sum P(2) = 9.4e-34
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 73 IALNSVQRRHAKVSTGDHVSL 93
I L+S+QR + V GD+V L
Sbjct: 108 IQLDSIQRENCNVKIGDYVYL 128
>CGD|CAL0002985 [details] [associations]
symbol:orf19.3949 species:5476 "Candida albicans" [GO:0042406
"extrinsic to endoplasmic reticulum membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0031936
"negative regulation of chromatin silencing" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 CGD:CAL0002985
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721858.1 RefSeq:XP_722018.1 ProteinModelPortal:Q5AK72
STRING:Q5AK72 GeneID:3636302 GeneID:3636397 KEGG:cal:CaO19.11431
KEGG:cal:CaO19.3949 Uniprot:Q5AK72
Length = 1314
Score = 411 (149.7 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 105/289 (36%), Positives = 156/289 (53%)
Query: 213 EFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMAR 272
+ N+ +GGL + + + A + P + I +G+L +GPPGTGKTLMAR
Sbjct: 394 DMNIDFSVVGGLD-NYINQLKEMVALPLLYPELYQNFAITPPRGVLFHGPPGTGKTLMAR 452
Query: 273 QIGKMLNGMEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF 328
+ + E KI G + LSK+VGE E+ +R LF +A+N Q + +I F
Sbjct: 453 ALAASCSTSERKITFFMRKGADCLSKWVGEAERQLRLLFEEAKNQQPS--------IIFF 504
Query: 329 DEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPG 388
DEID + R S ++ +H SIV+ LL +DG+++ V++IG TNR D +D AL RPG
Sbjct: 505 DEIDGLAPVRSSKQEQ--IHASIVSTLLALMDGMDNRGQVIVIGATNRPDAIDPALRRPG 562
Query: 389 RLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKS 448
R + + LPD R +IL+IHT K N L PD+ L+ LA TK Y GA+L +
Sbjct: 563 RFDREFYFPLPDLGSRKEILKIHTRKW--NPEL-PDLFLERLAQLTKGYGGADLRALCTE 619
Query: 449 AVSFALNR---QLSMDDLTKPVDEESIKVTMDDFLHALYEIVPAFGAST 494
A ++ R Q+ + V+ +KV DF+ A+ +IVP+ ST
Sbjct: 620 AALNSIQRKYPQIYGTNEKLKVNPSKVKVIAKDFMKAIEKIVPSSARST 668
Score = 37 (18.1 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 538 LLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDA 590
L+ G G+G+ L+A + V+ + +M G T + IV+ F +A
Sbjct: 750 LISGNEGNGQQYLSAAVLNHLEGFQVQSLDLGTMFGEPTRTPESTIVQAFIEA 802
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 372 (136.0 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 94/256 (36%), Positives = 143/256 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL + +I + + P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 147 VGGLDKQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 205
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V+G E++ K++GE + +R+LF A + +I DEID+I SRG
Sbjct: 206 TFIR-VSGSELVQKYIGEGSRMVRELFIMAREHAPS--------IIFMDEIDSIGSSRGE 256
Query: 341 TRDGTGVHDSIVN----QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
+ G G DS V +LL ++DG ES N+ ++ TNR D+LD ALLRPGR++ ++E
Sbjct: 257 SGSGGG--DSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEF 314
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
P + GRL IL+IH+ KM L +NL++++ + SGAEL+ V A +AL
Sbjct: 315 PNPGDAGRLDILKIHSRKMN----LTRGINLKKISDKMNGASGAELKAVCTEAGMYALRE 370
Query: 457 Q---LSMDDLTKPVDE 469
+ +S +D V +
Sbjct: 371 RRVHVSQEDFEMAVSK 386
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 371 (135.7 bits), Expect = 2.1e-33, P = 2.1e-33
Identities = 92/237 (38%), Positives = 136/237 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS + + R + P++ ++GIK KG+LLYGPPGTGKTL+AR + +N
Sbjct: 139 IGGLSEQIRQM-REVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINC 197
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+IV ++ K++GE+ + IR++F A+ Q +I DEIDAI R S
Sbjct: 198 NFMRIVVSA-IVDKYIGESARIIREMFNYAKEHQPC--------IIFMDEIDAIGGRRFS 248
Query: 341 TRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
GT I + +LL +DG E L NV +I TNR D+LD AL+RPGRL+ ++EI
Sbjct: 249 --QGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIP 306
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFAL 454
LP+E R++IL+IH NKM + D++ + + ++GA+L V A FA+
Sbjct: 307 LPNETARIEILKIHANKMTKLG----DIDYESVCRLCDGFNGADLRNVCTEAGMFAI 359
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 371 (135.7 bits), Expect = 2.1e-33, P = 2.1e-33
Identities = 92/237 (38%), Positives = 136/237 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS + + R + P++ ++GIK KG+LLYGPPGTGKTL+AR + +N
Sbjct: 139 IGGLSEQIRQM-REVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINC 197
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+IV ++ K++GE+ + IR++F A+ Q +I DEIDAI R S
Sbjct: 198 NFMRIVVSA-IVDKYIGESARIIREMFNYAKEHQPC--------IIFMDEIDAIGGRRFS 248
Query: 341 TRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
GT I + +LL +DG E L NV +I TNR D+LD AL+RPGRL+ ++EI
Sbjct: 249 --QGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIP 306
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFAL 454
LP+E R++IL+IH NKM + D++ + + ++GA+L V A FA+
Sbjct: 307 LPNETARIEILKIHANKMTKLG----DIDYESVCRLCDGFNGADLRNVCTEAGMFAI 359
>UNIPROTKB|E1BPU3 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
Length = 1281
Score = 397 (144.8 bits), Expect = 2.3e-33, P = 2.3e-33
Identities = 101/252 (40%), Positives = 148/252 (58%)
Query: 207 NIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTG 266
N+ HK +L IGGL + I P + + L I+ G+LLYGPPGTG
Sbjct: 827 NVNLHKPRDLGWDRIGGLH-DVRQILVDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTG 885
Query: 267 KTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVI 326
KTL+A I + +GM V GPE+LSK++G +E+ +RD+F A+ + ++
Sbjct: 886 KTLLAGVIARE-SGMNFISVKGPELLSKYIGASEQAVRDVFVRAQAAKPC--------IL 936
Query: 327 IFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLR 386
FDE ++I RG D TGV D +VNQLLT++DGVE L V ++ T+R D++D ALLR
Sbjct: 937 FFDEFESIAPRRG--HDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLR 994
Query: 387 PGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVA 446
PGRL+ V PD+ RL+IL N + E+ LA DV+LQ +A+ T +++GA+L+ +
Sbjct: 995 PGRLDKCVYCPPPDQASRLEIL----NVLSESLPLADDVDLQHVASLTDSFTGADLKALL 1050
Query: 447 KSAVSFALNRQL 458
A AL+ +L
Sbjct: 1051 YGAQLEALHGRL 1062
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 395 (144.1 bits), Expect = 3.5e-33, P = 3.5e-33
Identities = 126/433 (29%), Positives = 205/433 (47%)
Query: 76 NSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEFVKKGSKNEQVDAVLLANQLRKR 135
NS H S+ + +S P N L + E K S +++ DA L N
Sbjct: 787 NSNYINHLTESS-NKLSYTNMFPLNRKNTLLQNDKNEMNKDSSYDKKTDA--LDNYKNDS 843
Query: 136 FINQVMTAGQRVVFEYHGNNYIFTVNG--AAVEGQEKSNALERGIITNETYFVFEASNDS 193
I+ ++ + N+ T N V ++K N ++ + NE N
Sbjct: 844 TIDMEKKKNKKKSNFFFSNDDEETKNKNKTNVNQKKKKNPNDK-LDKNERRIPAYILNKL 902
Query: 194 GIKIVNQREG---ANSNIFRHKEFNLQSL---GIGGLSAEFADIFRRAFASRVFPPHVTS 247
IK + + N + R ++ + ++ IGG++ E + + + H+ +
Sbjct: 903 TIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMN-EVKEQLKETILYPLEYKHLYN 961
Query: 248 KLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLF 307
K + KG+LLYGPPG GKTL+A+ I V GPE+L+ + GE+E N+RDLF
Sbjct: 962 KFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFIS-VKGPELLTMWFGESEANVRDLF 1020
Query: 308 ADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNN 367
A + +I FDEID++ K R S + D ++NQ+LT+IDG+
Sbjct: 1021 DKAR--------AASPCIIFFDEIDSLAKERNSNTNNDA-SDRVINQILTEIDGINEKKT 1071
Query: 368 VLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNL 427
+ +I TNR D+LD+AL RPGRL+ + ISLPD R I + + +N+ L DV++
Sbjct: 1072 IFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKA----ILKNTPLNEDVDI 1127
Query: 428 QELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDDFL---HALY 484
++A RT+ +SGA++ + +SAV+ A+ + + ++ K EE K + F Y
Sbjct: 1128 HDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKIDDTDTY 1187
Query: 485 EIVPAFGASTDDL 497
+ VP DL
Sbjct: 1188 DPVPTLSKKHFDL 1200
Score = 372 (136.0 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 91/258 (35%), Positives = 144/258 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG+ + I R + P + +GI KG+L++G PGTGKT +A+ I N
Sbjct: 529 LGGMKKQLNKI-RELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNA 587
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
I+NGPE++SK +GE+E+ +R +F A ++T +I DEID+I R
Sbjct: 588 Y-CYIINGPEIMSKHIGESEQKLRKIFKKAS--EKTPC------IIFIDEIDSIANKR-- 636
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPD 400
++ + +V+QLLT +DG++ NNVL++ TNR + +D AL R GR + ++EI +PD
Sbjct: 637 SKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPD 696
Query: 401 ENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSM 460
E GR +IL T KMK L PDVNL+++A Y GA+L + A + +
Sbjct: 697 EQGRYEILLTKTKKMK----LDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHF 752
Query: 461 DDLTKPVDEESIKVTMDD 478
DL + E +K+++D+
Sbjct: 753 LDLDEEDFIEFMKISVDE 770
Score = 50 (22.7 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 538 LLEGPSGSGKTALAATAGIDSDFPFVKIISAE 569
LL GP G GKT LA + F+ + E
Sbjct: 972 LLYGPPGCGKTLLAKAIANECKANFISVKGPE 1003
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 395 (144.1 bits), Expect = 3.5e-33, P = 3.5e-33
Identities = 126/433 (29%), Positives = 205/433 (47%)
Query: 76 NSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEFVKKGSKNEQVDAVLLANQLRKR 135
NS H S+ + +S P N L + E K S +++ DA L N
Sbjct: 787 NSNYINHLTESS-NKLSYTNMFPLNRKNTLLQNDKNEMNKDSSYDKKTDA--LDNYKNDS 843
Query: 136 FINQVMTAGQRVVFEYHGNNYIFTVNG--AAVEGQEKSNALERGIITNETYFVFEASNDS 193
I+ ++ + N+ T N V ++K N ++ + NE N
Sbjct: 844 TIDMEKKKNKKKSNFFFSNDDEETKNKNKTNVNQKKKKNPNDK-LDKNERRIPAYILNKL 902
Query: 194 GIKIVNQREG---ANSNIFRHKEFNLQSL---GIGGLSAEFADIFRRAFASRVFPPHVTS 247
IK + + N + R ++ + ++ IGG++ E + + + H+ +
Sbjct: 903 TIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMN-EVKEQLKETILYPLEYKHLYN 961
Query: 248 KLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLF 307
K + KG+LLYGPPG GKTL+A+ I V GPE+L+ + GE+E N+RDLF
Sbjct: 962 KFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFIS-VKGPELLTMWFGESEANVRDLF 1020
Query: 308 ADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNN 367
A + +I FDEID++ K R S + D ++NQ+LT+IDG+
Sbjct: 1021 DKAR--------AASPCIIFFDEIDSLAKERNSNTNNDA-SDRVINQILTEIDGINEKKT 1071
Query: 368 VLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNL 427
+ +I TNR D+LD+AL RPGRL+ + ISLPD R I + + +N+ L DV++
Sbjct: 1072 IFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKA----ILKNTPLNEDVDI 1127
Query: 428 QELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDDFL---HALY 484
++A RT+ +SGA++ + +SAV+ A+ + + ++ K EE K + F Y
Sbjct: 1128 HDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKIDDTDTY 1187
Query: 485 EIVPAFGASTDDL 497
+ VP DL
Sbjct: 1188 DPVPTLSKKHFDL 1200
Score = 372 (136.0 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 91/258 (35%), Positives = 144/258 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG+ + I R + P + +GI KG+L++G PGTGKT +A+ I N
Sbjct: 529 LGGMKKQLNKI-RELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNA 587
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
I+NGPE++SK +GE+E+ +R +F A ++T +I DEID+I R
Sbjct: 588 Y-CYIINGPEIMSKHIGESEQKLRKIFKKAS--EKTPC------IIFIDEIDSIANKR-- 636
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPD 400
++ + +V+QLLT +DG++ NNVL++ TNR + +D AL R GR + ++EI +PD
Sbjct: 637 SKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPD 696
Query: 401 ENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSM 460
E GR +IL T KMK L PDVNL+++A Y GA+L + A + +
Sbjct: 697 EQGRYEILLTKTKKMK----LDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHF 752
Query: 461 DDLTKPVDEESIKVTMDD 478
DL + E +K+++D+
Sbjct: 753 LDLDEEDFIEFMKISVDE 770
Score = 50 (22.7 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 538 LLEGPSGSGKTALAATAGIDSDFPFVKIISAE 569
LL GP G GKT LA + F+ + E
Sbjct: 972 LLYGPPGCGKTLLAKAIANECKANFISVKGPE 1003
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 391 (142.7 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 129/490 (26%), Positives = 230/490 (46%)
Query: 101 DFNLALLTVELEFV----KKGSKNEQVDAVLLANQLRKRF-INQVMTAGQRVVFEYHGN- 154
+F L V++E + + NE + + + Q K+ IN+++ +G + Y+ N
Sbjct: 163 EFENNLNNVDIEIIVSNNNNNNNNENIRTLFSSKQFIKQLLINKLICSGMNISL-YNNNV 221
Query: 155 NYIF-TVNG---AAVEGQEKSNALERGIITNETYFVFEASNDSGIKIVNQREGANSNIFR 210
N I VN + +S + IITNE+ +SN S + +N + N +
Sbjct: 222 NLIIKNVNNNNNLKIGLISQSTKINIIIITNESLSCLYSSNSSNLLNLNYK---NKLFKK 278
Query: 211 HKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLM 270
K N + IGGL+ + + + P V L I KG+LL GPPGTGKT +
Sbjct: 279 FKLNNNNNFKIGGLNEQIK-LLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHL 337
Query: 271 ARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDE 330
R + + +E ++ ++ ++GETE+N+R++F +A +D+ S + V+ DE
Sbjct: 338 VRTVCDAYD-IEMISIDCAKISGSYIGETEENLRNIFQEA-SDKSIAKSNSPI-VVFIDE 394
Query: 331 IDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLN-NVLLIGMTNRKDMLDEALLRPGR 389
ID IC R + T +V Q LT +DG+ + N+++I TNR + +D AL RPGR
Sbjct: 395 IDTICPPRSKS---TQNESRVVGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGR 451
Query: 390 LEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSA 449
L+ ++EI +P++ RL IL+++ +K+ + P L ++A T Y GA ++ + + +
Sbjct: 452 LDREIEIPVPNKQQRLDILKLYCSKLPISP--TPSNLLDQIADETVGYVGANIQFLCRDS 509
Query: 450 VSFALNR----QLSMDDLTKPVDEESIKVTMDDFLHALYEIVPAFGASTDDLERSRLN-- 503
A ++ + ++ + +E+ + ++DF ++ PA + L + N
Sbjct: 510 AFIAFSKYNLLKYQNNEQNENENEKKYLIEIEDFRESIKNN-PASILKGEHLVENISNVS 568
Query: 504 -----GMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDS 558
G+ D + + + L E + SP +L GP G KT L S
Sbjct: 569 WDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSS 628
Query: 559 DFPFVKIISA 568
F+ + A
Sbjct: 629 KLSFLSLSGA 638
Score = 362 (132.5 bits), Expect = 7.1e-29, Sum P(2) = 7.1e-29
Identities = 106/320 (33%), Positives = 165/320 (51%)
Query: 151 YHGNNYIFTVNGAAVEGQEKSNALERGIITNETYFVFEASNDSG--IKIVNQREGANSN- 207
Y G N F +A K N L+ NE E N+ I+I + RE +N
Sbjct: 497 YVGANIQFLCRDSAFIAFSKYNLLKYQ--NNEQN---ENENEKKYLIEIEDFRESIKNNP 551
Query: 208 --IFR--HKEFNLQSLG---IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLY 260
I + H N+ ++ IGGL + + R+A K G+ KG++LY
Sbjct: 552 ASILKGEHLVENISNVSWDDIGGLD-DIKEELRQAIEWPNLYKESFEKFGLSPPKGIILY 610
Query: 261 GPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQ 320
GPPG KT + + + + + ++G + S ++G++E+ IRD+F A Q
Sbjct: 611 GPPGCSKTTLVKAVASS-SKLSFLSLSGATIFSPYLGDSEQTIRDIFKKAR--------Q 661
Query: 321 SDLHVIIFDEIDAICKSRGSTRDGTG--VHDSIVNQLLTKIDGVESLNNVLLIGMTNRKD 378
+ ++ FDEIDAI R + + +G +++ L ++DGVE LN V++IG TNR D
Sbjct: 662 TTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDGVEQLNGVIVIGATNRLD 721
Query: 379 MLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYS 438
M+D ALLRPGR + +EI LPD+ RL+IL+I T + L+ +VNL E++ T +S
Sbjct: 722 MIDNALLRPGRFDKILEIKLPDQLSRLKILKIKTKSIP----LSDNVNLIEISNLTNGFS 777
Query: 439 GAELEGVAKSAVSFALNRQL 458
GA+LE + + A +L R L
Sbjct: 778 GADLENLCREASFQSLRRDL 797
Score = 37 (18.1 bits), Expect = 7.1e-29, Sum P(2) = 7.1e-29
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 492 ASTDDLERSRLNGMVDCGD 510
AS L R LNG V+ D
Sbjct: 788 ASFQSLRRDLLNGFVEMYD 806
>UNIPROTKB|E2RLT2 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307 RefSeq:XP_532459.1
ProteinModelPortal:E2RLT2 Ensembl:ENSCAFT00000003132 GeneID:475227
KEGG:cfa:475227 NextBio:20851103 Uniprot:E2RLT2
Length = 1267
Score = 394 (143.8 bits), Expect = 4.8e-33, P = 4.8e-33
Identities = 99/252 (39%), Positives = 149/252 (59%)
Query: 207 NIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTG 266
N+ HK +L IGGL E I P + + L I+ G+LLYGPPGTG
Sbjct: 812 NVNLHKPRDLGWDKIGGLH-EVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTG 870
Query: 267 KTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVI 326
KTL+A I + +GM V GPE+LSK++G +E+ +RD+F A+ + ++
Sbjct: 871 KTLLAGVIARE-SGMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPC--------IL 921
Query: 327 IFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLR 386
FDE ++I RG D TGV D +VNQLLT++DGVE L V ++ T+R D++D ALLR
Sbjct: 922 FFDEFESIAPRRG--HDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLR 979
Query: 387 PGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVA 446
PGRL+ V PD+ RL+IL + ++ + LA DV+LQ +A+ T +++GA+L+ +
Sbjct: 980 PGRLDKCVYCPPPDQVSRLEILNVLSDSLP----LADDVDLQHVASVTNSFTGADLKALL 1035
Query: 447 KSAVSFALNRQL 458
+A A++ +L
Sbjct: 1036 YNAQLEAVHGRL 1047
>RGD|1559939 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016558 "protein import into
peroxisome matrix" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382 RGD:1559939
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 OrthoDB:EOG4JM7P2 EMBL:CH474013
IPI:IPI00777820 RefSeq:NP_001102690.1 UniGene:Rn.162727
Ensembl:ENSRNOT00000038136 GeneID:500006 KEGG:rno:500006
UCSC:RGD:1559939 NextBio:704745 Uniprot:D3ZZB2
Length = 1283
Score = 394 (143.8 bits), Expect = 4.9e-33, P = 4.9e-33
Identities = 98/252 (38%), Positives = 148/252 (58%)
Query: 207 NIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTG 266
N+ HK +L IGGL E I P + + L I+ G+LLYGPPGTG
Sbjct: 828 NVNLHKPRDLGWDKIGGLH-EVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTG 886
Query: 267 KTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVI 326
KTL+A + + +GM + GPE+LSK++G +E+ +RD+F A+ + ++
Sbjct: 887 KTLLAGVVARE-SGMNFISIQGPELLSKYIGASEQAVRDVFIRAQAAKPC--------IL 937
Query: 327 IFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLR 386
FDE ++I RG D TGV D +VNQLLT++DGVE L V ++ T+R D++D ALLR
Sbjct: 938 FFDEFESIAPRRG--HDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLR 995
Query: 387 PGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVA 446
PGRL+ V PD+ RL+IL + + + LA DV+LQ +A+ T++++GA+L+ +
Sbjct: 996 PGRLDKCVYCPPPDQVSRLEILTVLSKSLP----LADDVDLQHVASVTESFTGADLKALL 1051
Query: 447 KSAVSFALNRQL 458
+A AL +L
Sbjct: 1052 YNAQLEALQGRL 1063
Score = 132 (51.5 bits), Expect = 0.00013, P = 0.00013
Identities = 88/375 (23%), Positives = 160/375 (42%)
Query: 216 LQSLG-IGGLSAEFADIFRRAFASRVFPPHVTSKL-GIKHVKGMLLYGPPGTGKTLMARQ 273
L SLG + LS + + R + + + G+++ +L+ G G+GK+ +A+
Sbjct: 553 LSSLGGVSSLSVSAMEHITHSLLGRPLSRQLMALVAGLRN-GALLITGGKGSGKSTLAKA 611
Query: 274 IGKMLNGM---EPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDE 330
I K + ++V+ + K + +K + F++A Q + VI+ D+
Sbjct: 612 ICKEAHDALDAHVEMVDCKALRGKRLESIQKALEVAFSEAAWRQPS--------VILLDD 663
Query: 331 IDAICKSRGSTRDGTGVHDSIVNQLLTK-----IDGVESLNN-VLLIGMTNRKDMLDEAL 384
+D I ST + +++ +Q L I S+ + V LI + + L +L
Sbjct: 664 LDLIA-GLPSTPEHEHSPEAVQSQRLAHALNNMIKEFVSMGSLVALIATSQLQHSLHPSL 722
Query: 385 LRP-GRLEVQV--EISLPDENGRLQILQ-IHTNKMKENSFLAPDVNLQELAARTKNYSGA 440
+ G Q I PD+ R +IL + NK+ + +PD++L+ +A T+ +
Sbjct: 723 VSAQGVHTFQCIQHIQPPDQEQRCEILHSVVKNKLGCDISKSPDLDLKCIAKETEAFVAR 782
Query: 441 ELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDDFLHALYEIVPAFGASTDDLERS 500
+ + A+ +L+RQ + P E + +T DF AL +PA +L +
Sbjct: 783 DFTVLVDRAIHSSLSRQQN------PT-REGLTLTTADFQKALRGFLPA-SLRNVNLHKP 834
Query: 501 RLNGMVDCGDRH--KHIYQRAMLL-VEQVKVSKGSPL---VTCLLEGPSGSGKTALAATA 554
R G G H + I + L + ++ P+ LL GP G+GKT LA
Sbjct: 835 RDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVV 894
Query: 555 GIDSDFPFVKIISAE 569
+S F+ I E
Sbjct: 895 ARESGMNFISIQGPE 909
>MGI|MGI:1918632 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO;IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0042623 "ATPase
activity, coupled" evidence=ISO] [GO:0060152 "microtubule-based
peroxisome localization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1918632 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005777 GO:GO:0005778 GO:GO:0008289
GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0060152 KO:K13338
PANTHER:PTHR23077:SF12 CTD:5189 HOVERGEN:HBG008169 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 EMBL:BC090845 EMBL:AK017309
EMBL:AK149599 IPI:IPI00136789 IPI:IPI00653755 RefSeq:NP_082053.1
UniGene:Mm.379196 PDB:1WLF PDBsum:1WLF ProteinModelPortal:Q5BL07
SMR:Q5BL07 STRING:Q5BL07 PhosphoSite:Q5BL07 PaxDb:Q5BL07
PRIDE:Q5BL07 Ensembl:ENSMUST00000006061 Ensembl:ENSMUST00000121291
GeneID:71382 KEGG:mmu:71382 UCSC:uc008whf.1
GeneTree:ENSGT00550000075032 HOGENOM:HOG000252959 InParanoid:Q5BL07
OrthoDB:EOG4JM7P2 EvolutionaryTrace:Q5BL07 NextBio:333669
Bgee:Q5BL07 CleanEx:MM_PEX1 Genevestigator:Q5BL07 Uniprot:Q5BL07
Length = 1284
Score = 394 (143.8 bits), Expect = 4.9e-33, P = 4.9e-33
Identities = 125/380 (32%), Positives = 194/380 (51%)
Query: 207 NIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTG 266
N+ HK +L IGGL E I P + + L I+ G+LLYGPPGTG
Sbjct: 829 NVNLHKPRDLGWDKIGGLH-EVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTG 887
Query: 267 KTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVI 326
KTL+A + + +GM + GPE+LSK++G +E+ +RD+F A+ + ++
Sbjct: 888 KTLLAGVVARE-SGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPC--------IL 938
Query: 327 IFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLR 386
FDE ++I RG D TGV D +VNQLLT++DGVE L V ++ T+R D++D ALLR
Sbjct: 939 FFDEFESIAPRRG--HDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLR 996
Query: 387 PGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVA 446
PGRL+ V PD+ RL+IL + + ++ LA DV+LQ +A+ T +++GA+L+ +
Sbjct: 997 PGRLDKCVYCPPPDQVSRLEILTV----LSKSLALADDVDLQHVASVTDSFTGADLKALL 1052
Query: 447 KSAVSFALNRQLSMDDLTKPVDEESIKVTMDD--FLHALYEIVPAFGASTDDLERSRLN- 503
+A AL +L L +++ FL+ + G LE+S L+
Sbjct: 1053 YNAQLEALQGRLLPSGLPDGGSSSDSDLSLSSMVFLNHSSGSDDSAGDGECGLEQSLLSL 1112
Query: 504 GMVDC-GDRHK-HIYQRAMLLVEQVKVSKGSP--LVTCLLEGPSGSGKTALAATAGIDSD 559
M + D K ++Y+ + ++ G+P L + L PS S L A G D
Sbjct: 1113 EMSEILPDESKFNMYRLYFGSSYESELGNGTPSDLSSHCLSAPS-SVTQDLPAAPGKDPL 1171
Query: 560 FPFVKIISAESMIGLHESTK 579
F + S G + T+
Sbjct: 1172 FTQHPVFRTPSQEGCQDLTQ 1191
>SGD|S000001680 [details] [associations]
symbol:PEX1 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042623
"ATPase activity, coupled" evidence=IEA] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IMP;IPI] [GO:0005777
"peroxisome" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IMP] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IGI;IDA;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
SGD:S000001680 GO:GO:0005524 EMBL:BK006944 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12
GeneTree:ENSGT00550000075032 OrthoDB:EOG4TQQJ3 EMBL:M58676
EMBL:Z28197 PIR:S38034 RefSeq:NP_012724.1 ProteinModelPortal:P24004
SMR:P24004 DIP:DIP-4266N IntAct:P24004 MINT:MINT-483826
STRING:P24004 PaxDb:P24004 EnsemblFungi:YKL197C GeneID:853636
KEGG:sce:YKL197C CYGD:YKL197c HOGENOM:HOG000163138 OMA:SAVAQQC
NextBio:974520 Genevestigator:P24004 GermOnline:YKL197C
Uniprot:P24004
Length = 1043
Score = 391 (142.7 bits), Expect = 7.1e-33, P = 7.1e-33
Identities = 101/263 (38%), Positives = 155/263 (58%)
Query: 212 KEFNLQSLGIGGLSAEFADIFRRA--FASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTL 269
KE N++ IG L A D+ + ++ P V L ++ G+LLYG PG GKTL
Sbjct: 690 KETNIKWGDIGAL-ANAKDVLLETLEWPTKYEPIFVNCPLRLR--SGILLYGYPGCGKTL 746
Query: 270 MARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFD 329
+A + + G+ V GPE+L+KF+G +E+NIR+LF A++ + ++ FD
Sbjct: 747 LASAVAQQC-GLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPC--------ILFFD 797
Query: 330 EIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGR 389
E D+I RG D TGV D +VNQLLT++DG E L+ V ++ T+R D++D ALLRPGR
Sbjct: 798 EFDSIAPKRG--HDSTGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGR 855
Query: 390 LEVQVEISLPDENGRLQILQIHTN-KMKENS---F-LAPDVNLQELAARTKNYSGAELEG 444
L+ V ++P E+ RL ILQ N K K+ F L + +L+ +A +T +SGA+L+G
Sbjct: 856 LDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQG 915
Query: 445 VAKSAVSFALNRQLSMDDLTKPV 467
+ +A +++R LS D ++ V
Sbjct: 916 LCYNAYLKSVHRWLSAADQSEVV 938
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 366 (133.9 bits), Expect = 7.5e-33, P = 7.5e-33
Identities = 92/259 (35%), Positives = 147/259 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ +GGL+ + ++ R + P + ++GI KG LL+GPPGTGKTL+AR +
Sbjct: 146 NISYSDVGGLAEQIREL-REVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAV 204
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
L+ K+V+ ++ K++GE+ + IR++F A + Q ++ DEIDAI
Sbjct: 205 ASQLDCNFLKVVSSA-IVDKYIGESARMIREMFNYARDHQPC--------IVFMDEIDAI 255
Query: 335 CKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLE 391
R S +GT I + +LL ++DG +SL V +I TNR D LD ALLRPGRL+
Sbjct: 256 GGRRFS--EGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLD 313
Query: 392 VQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVS 451
++EI LP+E RL+IL+IH+NK+ ++ +++ + + + +S A+L V A
Sbjct: 314 RKIEIGLPNEQSRLEILKIHSNKITKHG----EIDFEAVVKLSDGFSAADLRNVCTEAGM 369
Query: 452 FALN--RQLSMD-DLTKPV 467
FA+ R+ +D D K V
Sbjct: 370 FAIRAEREFVIDEDFMKAV 388
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 366 (133.9 bits), Expect = 7.5e-33, P = 7.5e-33
Identities = 92/259 (35%), Positives = 147/259 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ +GGL+ + ++ R + P + ++GI KG LL+GPPGTGKTL+AR +
Sbjct: 146 NISYSDVGGLAEQIREL-REVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAV 204
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
L+ K+V+ ++ K++GE+ + IR++F A + Q ++ DEIDAI
Sbjct: 205 ASQLDCNFLKVVSSA-IVDKYIGESARMIREMFNYARDHQPC--------IVFMDEIDAI 255
Query: 335 CKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLE 391
R S +GT I + +LL ++DG +SL V +I TNR D LD ALLRPGRL+
Sbjct: 256 GGRRFS--EGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLD 313
Query: 392 VQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVS 451
++EI LP+E RL+IL+IH+NK+ ++ +++ + + + +S A+L V A
Sbjct: 314 RKIEIGLPNEQSRLEILKIHSNKITKHG----EIDFEAVVKLSDGFSAADLRNVCTEAGM 369
Query: 452 FALN--RQLSMD-DLTKPV 467
FA+ R+ +D D K V
Sbjct: 370 FAIRAEREFVIDEDFMKAV 388
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 365 (133.5 bits), Expect = 9.6e-33, P = 9.6e-33
Identities = 96/271 (35%), Positives = 149/271 (54%)
Query: 205 NSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPG 264
N F E GIGGL+ + ++ R + P + ++GIK KG+LLYGPPG
Sbjct: 169 NMTSFEQGEITFD--GIGGLTEQIREL-REVIELPLKNPEIFQRVGIKPPKGVLLYGPPG 225
Query: 265 TGKTLMARQIGKMLNGMEPKIVNGPE--VLSKFVGETEKNIRDLFADAENDQRTRGDQSD 322
TGKTL+A+ + + + P ++ K++GE+ + IR++FA A+ +
Sbjct: 226 TGKTLLAKAVAATIGA---NFIFSPASGIVDKYIGESARIIREMFAYAKEHEPC------ 276
Query: 323 LHVIIFDEIDAICKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDM 379
+I DE+DAI R S +GT I + +LLT++DG ++L +I TNR D
Sbjct: 277 --IIFMDEVDAIGGRRFS--EGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDT 332
Query: 380 LDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSG 439
LD ALLRPGRL+ +VEI LP+E GRL+I +IHT K+K+ + + + + ++G
Sbjct: 333 LDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTG----EFDFEAAVKMSDGFNG 388
Query: 440 AELEGVAKSAVSFAL--NRQ-LSMDDLTKPV 467
A++ A A FA+ +R ++ DDL K V
Sbjct: 389 ADIRNCATEAGFFAIRDDRDHINPDDLMKAV 419
>GENEDB_PFALCIPARUM|MAL8P1.92 [details] [associations]
symbol:MAL8P1.92 "ATPase, putative"
species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AL844507 RefSeq:XP_001349382.2
ProteinModelPortal:Q8IAX9 EnsemblProtists:MAL8P1.92:mRNA
GeneID:2655443 KEGG:pfa:MAL8P1.92 EuPathDB:PlasmoDB:PF3D7_0814300
Uniprot:Q8IAX9
Length = 1200
Score = 390 (142.3 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 99/271 (36%), Positives = 152/271 (56%)
Query: 188 EASNDSGIKIVN--QREGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHV 245
E +ND + VN +++ N NI NL + IG L + I F V ++
Sbjct: 645 EINNDIIFEGVNNIKKKMTNENICEVPNINLDN--IGSLK-KIKKILESKFILPVKYSNI 701
Query: 246 TSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIV--NGPEVLSKFVGETEKNI 303
LGI G+LLYGPPG GKT++A+ I N M+ + GPE+L+K+VGE+EK +
Sbjct: 702 YKHLGINKSMGILLYGPPGCGKTMLAKAIS---NEMKANFIAIKGPEILNKYVGESEKKV 758
Query: 304 RDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVE 363
R++F+ A + +I FDEID+IC +R + + D +VNQLL+++DG+
Sbjct: 759 REIFSYASVYKPC--------LIFFDEIDSICINRSNNKS-VSASDRVVNQLLSEMDGLS 809
Query: 364 SLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAP 423
V +I TNR D++D+ALLR GR + + ISLP GR+ IL+ K+ +N +
Sbjct: 810 QREGVYIIATTNRPDIIDKALLRSGRFDQLIYISLPKYQGRVDILK----KLSKNMPIDK 865
Query: 424 DVNLQELAARTKNYSGAELEGVAKSAVSFAL 454
+V +E++ T+ YSGA+L GV + + AL
Sbjct: 866 NVRFEEISKLTRGYSGADLYGVLRESAFIAL 896
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 364 (133.2 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 96/253 (37%), Positives = 144/253 (56%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS + ++ R + P + ++GIK KG+LLYGPPGTGKTL+AR I L
Sbjct: 139 IGGLSNQIREL-REVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEA 197
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
K+V+ ++ K++GE+ + IR++F A + Q VI DEIDAI R S
Sbjct: 198 NFLKVVSSA-IVDKYIGESARVIREMFGYARDHQPC--------VIFMDEIDAIGGRRFS 248
Query: 341 TRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
+GT I + +LL ++DG ++L+ V +I TNR D+LD ALLRPGRL+ ++EI
Sbjct: 249 --EGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIP 306
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-- 455
LP+E GR+ +L+IH + ++ DV+ + +A ++ A+L V A FA+
Sbjct: 307 LPNEAGRVDVLKIHAANITKHG----DVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAE 362
Query: 456 RQLSMD-DLTKPV 467
R M+ D K V
Sbjct: 363 RDYVMEEDFMKAV 375
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 364 (133.2 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 91/239 (38%), Positives = 137/239 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + V P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 157 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 215
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-- 338
+ V+G E++ KF+GE + +R+LF A + +I DEID+I SR
Sbjct: 216 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRLE 266
Query: 339 GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
G + + V +++ +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 267 GGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPP 325
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
P+E RL IL+IH+ KM L +NL+++A SGAE++GV A +AL +
Sbjct: 326 PNEEARLDILKIHSRKMN----LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER 380
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 364 (133.2 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 91/239 (38%), Positives = 137/239 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + V P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 151 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 209
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-- 338
+ V+G E++ KF+GE + +R+LF A + +I DEID+I SR
Sbjct: 210 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRLE 260
Query: 339 GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
G + + V +++ +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 261 GGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPP 319
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
P+E RL IL+IH+ KM L +NL+++A SGAE++GV A +AL +
Sbjct: 320 PNEEARLDILKIHSRKMN----LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER 374
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 364 (133.2 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 91/239 (38%), Positives = 137/239 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + V P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 151 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 209
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-- 338
+ V+G E++ KF+GE + +R+LF A + +I DEID+I SR
Sbjct: 210 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRLE 260
Query: 339 GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
G + + V +++ +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 261 GGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPP 319
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
P+E RL IL+IH+ KM L +NL+++A SGAE++GV A +AL +
Sbjct: 320 PNEEARLDILKIHSRKMN----LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER 374
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 364 (133.2 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 91/239 (38%), Positives = 137/239 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + V P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 151 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 209
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-- 338
+ V+G E++ KF+GE + +R+LF A + +I DEID+I SR
Sbjct: 210 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRLE 260
Query: 339 GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
G + + V +++ +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 261 GGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPP 319
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
P+E RL IL+IH+ KM L +NL+++A SGAE++GV A +AL +
Sbjct: 320 PNEEARLDILKIHSRKMN----LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER 374
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 364 (133.2 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 91/239 (38%), Positives = 137/239 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + V P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 151 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 209
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-- 338
+ V+G E++ KF+GE + +R+LF A + +I DEID+I SR
Sbjct: 210 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRLE 260
Query: 339 GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
G + + V +++ +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 261 GGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPP 319
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
P+E RL IL+IH+ KM L +NL+++A SGAE++GV A +AL +
Sbjct: 320 PNEEARLDILKIHSRKMN----LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER 374
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 364 (133.2 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 91/239 (38%), Positives = 137/239 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + V P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 159 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 217
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-- 338
+ V+G E++ KF+GE + +R+LF A + +I DEID+I SR
Sbjct: 218 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRLE 268
Query: 339 GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
G + + V +++ +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 269 GGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPP 327
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
P+E RL IL+IH+ KM L +NL+++A SGAE++GV A +AL +
Sbjct: 328 PNEEARLDILKIHSRKMN----LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER 382
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 364 (133.2 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 91/239 (38%), Positives = 137/239 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + V P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 159 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 217
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-- 338
+ V+G E++ KF+GE + +R+LF A + +I DEID+I SR
Sbjct: 218 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRLE 268
Query: 339 GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
G + + V +++ +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 269 GGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPP 327
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
P+E RL IL+IH+ KM L +NL+++A SGAE++GV A +AL +
Sbjct: 328 PNEEARLDILKIHSRKMN----LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER 382
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 364 (133.2 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 91/239 (38%), Positives = 137/239 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + V P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 151 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 209
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-- 338
+ V+G E++ KF+GE + +R+LF A + +I DEID+I SR
Sbjct: 210 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRLE 260
Query: 339 GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
G + + V +++ +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 261 GGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPP 319
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
P+E RL IL+IH+ KM L +NL+++A SGAE++GV A +AL +
Sbjct: 320 PNEEARLDILKIHSRKMN----LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER 374
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 364 (133.2 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 91/239 (38%), Positives = 137/239 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + V P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 151 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 209
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-- 338
+ V+G E++ KF+GE + +R+LF A + +I DEID+I SR
Sbjct: 210 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRLE 260
Query: 339 GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
G + + V +++ +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 261 GGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPP 319
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
P+E RL IL+IH+ KM L +NL+++A SGAE++GV A +AL +
Sbjct: 320 PNEEARLDILKIHSRKMN----LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER 374
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 364 (133.2 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 91/239 (38%), Positives = 137/239 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + V P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 151 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 209
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-- 338
+ V+G E++ KF+GE + +R+LF A + +I DEID+I SR
Sbjct: 210 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRLE 260
Query: 339 GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
G + + V +++ +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 261 GGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPP 319
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
P+E RL IL+IH+ KM L +NL+++A SGAE++GV A +AL +
Sbjct: 320 PNEEARLDILKIHSRKMN----LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER 374
>UNIPROTKB|E1BY08 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
Length = 1290
Score = 390 (142.3 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 93/243 (38%), Positives = 146/243 (60%)
Query: 207 NIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTG 266
N+ HK ++ IGGL + I P + + L I+ G+LLYG PGTG
Sbjct: 836 NVSLHKPKDIGWDRIGGLK-DVRQILMDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTG 894
Query: 267 KTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVI 326
KTL+A + + +GM V GPE+LSK++G +E+ +RD+F+ A+ + ++
Sbjct: 895 KTLLAGVVARE-SGMNFISVKGPELLSKYIGASEQAVRDIFSRAQAAKPC--------IV 945
Query: 327 IFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLR 386
FDE D+I RG D TGV D +VNQLLT++DGVE L V ++ T+R D++D ALLR
Sbjct: 946 FFDEFDSIAPRRG--HDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLR 1003
Query: 387 PGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVA 446
PGRL+ + PD++ R +IL+ ++ + LA DV+L+ LAA+T++++GA+L+ +
Sbjct: 1004 PGRLDKCLYCPPPDQSSRCEILKALSHSLS----LANDVDLEYLAAKTEHFTGADLKALL 1059
Query: 447 KSA 449
+A
Sbjct: 1060 YNA 1062
>MGI|MGI:1917722 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
MGI:MGI:1917722 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006200 GO:GO:0006351 GO:GO:0016887 eggNOG:COG0464
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 CTD:29028
HOVERGEN:HBG080873 ChiTaRS:ATAD2 EMBL:AK029867 EMBL:AK134319
IPI:IPI00135252 IPI:IPI00228860 RefSeq:NP_081711.2
UniGene:Mm.221758 ProteinModelPortal:Q8CDM1 SMR:Q8CDM1
IntAct:Q8CDM1 STRING:Q8CDM1 PhosphoSite:Q8CDM1 PRIDE:Q8CDM1
GeneID:70472 KEGG:mmu:70472 UCSC:uc007vtf.1 UCSC:uc007vtg.1
HOGENOM:HOG000034119 InParanoid:Q3UYW6 NextBio:331701
CleanEx:MM_ATAD2 Genevestigator:Q8CDM1
GermOnline:ENSMUSG00000022360 Uniprot:Q8CDM1
Length = 1040
Score = 388 (141.6 bits), Expect = 1.5e-32, P = 1.5e-32
Identities = 102/276 (36%), Positives = 148/276 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGLS+ A + ++P V K I+ +G L YGPPGTGKTL+AR + +
Sbjct: 83 VGGLSSHIAALKEMVVFPLLYP-EVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSR 141
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
+ ++ G + LSK+VGE+E+ +R LF DQ Q +I FDEID +
Sbjct: 142 GDKRVAFFMRKGADCLSKWVGESERQLRLLF-----DQAY---QMRPAIIFFDEIDGLAP 193
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG++S +++IG TNR D +D AL RPGR + +
Sbjct: 194 VRSSRQDQ--IHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 251
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
SLPD+N R +IL+IHT D+ L+ELA Y GA+++ + A AL R
Sbjct: 252 SLPDKNARKEILKIHTRDWNPKPV---DMFLEELAEHCVGYCGADIKSICAEAALCALRR 308
Query: 457 QLSMDDLTKP---VDEESIKVTMDDFLHALYEIVPA 489
+ T +D SI ++ DF AL +I PA
Sbjct: 309 RYPQIYTTSEKLQLDLSSITISAKDFEAALQKIRPA 344
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 363 (132.8 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 91/237 (38%), Positives = 129/237 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ S +GIK KG+L+YGPPGTGKTL+AR N
Sbjct: 170 IGGLDKQIQELVEAVVLPMTHKERFES-IGIKPPKGVLMYGPPGTGKTLLARACAAQTNS 228
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ T +I DE+DAI R
Sbjct: 229 TYLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKGPT--------IIFIDELDAIGTKRFD 279
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S G + +LL ++DG S N+ +I TNR D+LD ALLR GRL+ ++E LP
Sbjct: 280 SEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLP 339
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+E R ILQIH+ KM ++ DVN ELA +++++GA+L+ V A AL R
Sbjct: 340 NEEARAHILQIHSRKMN----VSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRR 392
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 363 (132.8 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 91/239 (38%), Positives = 132/239 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL + +I + V P + LGI KG+LLYGPPGTGKTL+AR +
Sbjct: 177 VGGLDTQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTEC 235
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-- 338
+ V+G E++ KF+GE + +R+LF A + +I DEID+I SR
Sbjct: 236 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRVE 286
Query: 339 GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
GS R G + +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 287 GS-RGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPA 345
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
PDE R QIL+IH+ KM L + + ++A + SGAE++ V A FAL +
Sbjct: 346 PDEKARAQILKIHSRKMN----LMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRER 400
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 383 (139.9 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 95/262 (36%), Positives = 148/262 (56%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P + S LG+ G+LLYGPPGTGKTL+A+ + M V GPE+++ +VG++E+N
Sbjct: 428 PELLS-LGLCR-SGLLLYGPPGTGKTLLAKAVATTCT-MTFLSVKGPELINMYVGQSEEN 484
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R++FA R R +I FDE+D++ +RG + D GV D +V+QLL ++DG+
Sbjct: 485 VRNVFA------RARAAAPC--IIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGL 536
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL-PDENGRLQILQIHTNKMKENSFL 421
S V +IG TNR D+LD ALLRPGR + V + + D +LQ+L T K K L
Sbjct: 537 HSSREVFVIGATNRPDLLDPALLRPGRFDKLVYVGVNEDRESQLQVLSAVTRKFK----L 592
Query: 422 APDVNLQELAARTK-NYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDDFL 480
P VNL + +GA++ + A+ A+ R++ + + ++ +TM+DFL
Sbjct: 593 DPSVNLSSILEECPAQLTGADIYSLCSDAMMCAVKRKVEWIEEGLDTESSALILTMEDFL 652
Query: 481 HALYEIVPAFGASTDDLERSRL 502
A + P+ S +L R +L
Sbjct: 653 QAAARLQPS--VSEQELLRYKL 672
Score = 157 (60.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 96/365 (26%), Positives = 154/365 (42%)
Query: 243 PHVTSKLGIKHVKG-MLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEK 301
PH+TS+ G +LL GP G+GKT+ R + LN + V+ + TE+
Sbjct: 151 PHLTSQAAALSGAGSVLLSGPSGSGKTMAVRAVCSCLN-LHLFKVDCVSLCGDTSAATEE 209
Query: 302 NIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDG 361
I FA A+ Q V++ +I+ + + R + V ++ QLL D
Sbjct: 210 KIHMAFAQAQ--------QYHPCVLLLKDIEVLGRDRDRLGEDARVIATL-RQLLLDRDP 260
Query: 362 VESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFL 421
+S + VL+IG T + + + EV++E D+ R +L + T + L
Sbjct: 261 AQSSHPVLVIGTTCKPQDVPTDVQTAFLHEVKIEALSEDQ--RRAMLSMLTASLP----L 314
Query: 422 APDVNLQELAARTKNYS-G---AELEGVAKSA------VSF--ALNRQLSMDDLTK--PV 467
+V+L +LA RT + G A L +++A +SF LN ++ D T PV
Sbjct: 315 GKEVSLAKLARRTAGFVLGDFCALLSHSSRAACTRIQALSFPGGLNEEVERDFCTAGFPV 374
Query: 468 DEESIKVTMDDFLHALYEIVPAFGA-STDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQV 526
EE V +D LH + A GA + + G+ + K I L +E
Sbjct: 375 LEEDFNVALDQ-LHDAHS--QAVGAPKIPSVSWQDVGGLHEV---KKEILDTIQLPLEHP 428
Query: 527 KV-SKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVK 585
++ S G LL GP G+GKT LA F+ + E +I ++ +
Sbjct: 429 ELLSLGLCRSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPE-LINMYVGQSEENVRN 487
Query: 586 VFEDA 590
VF A
Sbjct: 488 VFARA 492
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 362 (132.5 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 89/240 (37%), Positives = 139/240 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL+ + ++ R + P + ++GI KG LLYGPPGTGKTL+AR + L+
Sbjct: 143 IGGLTDQIREL-REVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDA 201
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
K+V+ ++ K++GE+ + IR++F A + Q +I DEIDAI R S
Sbjct: 202 NFLKVVSSA-IVDKYIGESARLIREMFNYARDHQPC--------IIFMDEIDAIGGRRFS 252
Query: 341 TRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
+GT I + +LL ++DG +SL V +I TNR D LD ALLRPGRL+ ++EI
Sbjct: 253 --EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIP 310
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
LP+E RL+IL+IH K+ ++ +++ + + + N++GA+L V A FA+ +
Sbjct: 311 LPNEQARLEILKIHALKIAKHG----EIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAE 366
>UNIPROTKB|E1BC78 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:DAAA02038173 EMBL:DAAA02038174
IPI:IPI00923885 Ensembl:ENSBTAT00000061524 Uniprot:E1BC78
Length = 1372
Score = 388 (141.6 bits), Expect = 2.5e-32, P = 2.5e-32
Identities = 100/276 (36%), Positives = 150/276 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGLS A + ++P V K I+ +G L YGPPGTGKTL+AR + +
Sbjct: 414 VGGLSNHIAALKEMVVFPLLYP-EVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQ 472
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
+ ++ G + LSK+VGE+E+ +R LF DQ + S +I FDEID +
Sbjct: 473 GDKRVAFFMRKGADCLSKWVGESERQLRLLF-----DQAYQMRPS---IIFFDEIDGLAP 524
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG++S +++IG TNR D +D AL RPGR + +
Sbjct: 525 VRSSRQDQ--IHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 582
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
SLPD++ R +IL+IHT D+ L+ELA + Y GA+++ V A AL R
Sbjct: 583 SLPDKDARKEILKIHTRDWNPKPL---DMFLEELAENSVGYCGADIKSVCSEAALCALRR 639
Query: 457 QLSMDDLTKP---VDEESIKVTMDDFLHALYEIVPA 489
+ T +D SI ++ DF A+ +++PA
Sbjct: 640 RYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMIPA 675
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 361 (132.1 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 93/241 (38%), Positives = 135/241 (56%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL + +I + V P + LGI KG+LLYGPPGTGKTL+AR +
Sbjct: 150 VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTEC 208
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V+G E++ KF+GE + +R+LF A + +I DEID+I SR
Sbjct: 209 TFIR-VSGSELVQKFIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSIGSSR-- 257
Query: 341 TRDGTGVHDSIVN----QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
G+G DS V +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 258 IESGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEF 316
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
P+E RL IL+IH+ KM L +NL+++A SGAE++GV A +AL
Sbjct: 317 PPPNEEARLDILKIHSRKMN----LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 372
Query: 457 Q 457
+
Sbjct: 373 R 373
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 361 (132.1 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 90/241 (37%), Positives = 134/241 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL + +I + V P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 147 VGGLEKQIKEI-KEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDC 205
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V+G E++ K++GE + +R+LF A + +I DEID+I SR
Sbjct: 206 KFIR-VSGSELVQKYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSIGSSRSD 256
Query: 341 TRDGTGVHDSIVN----QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
+ G+G DS V +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 257 SSGGSG--DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEF 314
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
P R +IL+IH+ M L ++L+ +A + SGAEL+GV A FAL
Sbjct: 315 PPPSAEARAEILRIHSRSMN----LTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRE 370
Query: 457 Q 457
+
Sbjct: 371 R 371
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 385 (140.6 bits), Expect = 2.8e-32, P = 2.8e-32
Identities = 98/248 (39%), Positives = 145/248 (58%)
Query: 211 HKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLM 270
HK +L IGGL E I P + + L I+ G+LLYGPPGTGKTL+
Sbjct: 510 HKPRDLGWDKIGGLH-EVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLL 568
Query: 271 ARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDE 330
A I + + M V GPE+LSK++G +E+ +RD+F A+ + ++ FDE
Sbjct: 569 AGVIARE-SRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPC--------ILFFDE 619
Query: 331 IDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRL 390
++I RG D TGV D +VNQLLT++DGVE L V ++ T+R D++D ALLRPGRL
Sbjct: 620 FESIAPRRG--HDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRL 677
Query: 391 EVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAV 450
+ V PD+ RL+IL + ++ + LA DV+LQ +A+ T +++GA+L+ + +A
Sbjct: 678 DKCVYCPPPDQVSRLEILNVLSDSLP----LADDVDLQHVASVTDSFTGADLKALLYNAQ 733
Query: 451 SFALNRQL 458
AL+ L
Sbjct: 734 LEALHGML 741
>UNIPROTKB|I3LPI5 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
Length = 1286
Score = 387 (141.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 98/253 (38%), Positives = 149/253 (58%)
Query: 207 NIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTG 266
N+ HK +L IGGL E I P + + L I+ G+LLYGPPGTG
Sbjct: 831 NVNLHKPRDLGWDHIGGLR-EVRQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTG 889
Query: 267 KTLMARQIGKMLNGMEPKIVN-GPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHV 325
KTL+A + + +GM ++ GPE+LSK++G +E+ +RD+F A+ + +
Sbjct: 890 KTLLAGVVARE-SGMILLVLRYGPELLSKYIGASEQAVRDIFIRAQAAKPC--------I 940
Query: 326 IIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALL 385
+ FDE ++I RG D TGV D +VNQLLT++DGVE L V ++ T+R D++D ALL
Sbjct: 941 LFFDEFESIAPRRG--HDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALL 998
Query: 386 RPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGV 445
RPGRL+ V PD+ RL+IL + + + LA DV+LQ +A+ T +++GA+L+ +
Sbjct: 999 RPGRLDKCVYCPPPDQVSRLEILNVLSASLP----LAEDVDLQHVASLTDSFTGADLKAL 1054
Query: 446 AKSAVSFALNRQL 458
+A AL+ +L
Sbjct: 1055 LYNAQLEALHGRL 1067
>UNIPROTKB|E2RRW1 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
CTD:29028 OMA:PSVYENG GeneTree:ENSGT00550000074694
EMBL:AAEX03008783 RefSeq:XP_850520.1 ProteinModelPortal:E2RRW1
Ensembl:ENSCAFT00000001534 GeneID:475090 KEGG:cfa:475090
Uniprot:E2RRW1
Length = 1373
Score = 387 (141.3 bits), Expect = 3.2e-32, P = 3.2e-32
Identities = 99/276 (35%), Positives = 149/276 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGLS A + ++P V K I+ +G L YGPPGTGKTL+AR + +
Sbjct: 408 VGGLSNHIAALKEMVVFPLLYP-EVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQ 466
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
+ ++ G + LSK+VGE+E+ +R LF DQ + S +I FDEID +
Sbjct: 467 GDKRVAFFMRKGADCLSKWVGESERQLRLLF-----DQAYQMRPS---IIFFDEIDGLAP 518
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG++S +++IG TNR D +D AL RPGR + +
Sbjct: 519 VRSSRQDQ--IHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 576
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
SLPD++ R +IL+IHT D+ L+ELA Y GA+++ + A AL R
Sbjct: 577 SLPDKDARKEILKIHTRDWNPKPL---DIFLEELAENCVGYCGADIKSICSEAALCALRR 633
Query: 457 QLSMDDLTKP---VDEESIKVTMDDFLHALYEIVPA 489
+ T +D SI ++ DF A+ +++PA
Sbjct: 634 RYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMIPA 669
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 359 (131.4 bits), Expect = 4.3e-32, P = 4.3e-32
Identities = 86/254 (33%), Positives = 143/254 (56%)
Query: 207 NIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTG 266
N+ N+ +GGL + ++ R + + P + ++GIK KG+LLYGPPGTG
Sbjct: 127 NMLHEDPGNISYSAVGGLGDQIREL-RESIELPLMNPELFLRVGIKPPKGVLLYGPPGTG 185
Query: 267 KTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVI 326
KTL+AR I ++ K+V+ ++ K++GE+ + IR++F A Q +I
Sbjct: 186 KTLLARAIASNIDANFLKVVSSA-IIDKYIGESARLIREMFNYAREHQPC--------II 236
Query: 327 IFDEIDAICKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEA 383
DEIDAI R S +GT I + +LL ++DG + L V +I TNR D+LD A
Sbjct: 237 FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPA 294
Query: 384 LLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELE 443
LLRPGRL+ ++EI LP+E R++IL+IH + + ++ +++ + + + ++GA+L
Sbjct: 295 LLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHG----EIDYEAIVKLGEGFNGADLR 350
Query: 444 GVAKSAVSFALNRQ 457
+ A FA+ +
Sbjct: 351 NICTEAGMFAIRAE 364
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 359 (131.4 bits), Expect = 4.3e-32, P = 4.3e-32
Identities = 89/241 (36%), Positives = 136/241 (56%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 163 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 221
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V+G E++ K++GE + +R+LF A + +I DEID+I +R
Sbjct: 222 TFIR-VSGSELVQKYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSIGSARME 272
Query: 341 TRDGTGVHDSIVN----QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
+ G G DS V +LL ++DG E+ N + ++ TNR D+LD+ALLRPGR++ ++E
Sbjct: 273 SGSGNG--DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
P+E R IL+IH+ KM L ++L+++A + SGAEL+ V A FAL
Sbjct: 331 PNPNEESRFDILKIHSRKMN----LMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
Query: 457 Q 457
+
Sbjct: 387 R 387
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 359 (131.4 bits), Expect = 4.3e-32, P = 4.3e-32
Identities = 89/241 (36%), Positives = 136/241 (56%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 163 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 221
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V+G E++ K++GE + +R+LF A + +I DEID+I +R
Sbjct: 222 TFIR-VSGSELVQKYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSIGSARME 272
Query: 341 TRDGTGVHDSIVN----QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
+ G G DS V +LL ++DG E+ N + ++ TNR D+LD+ALLRPGR++ ++E
Sbjct: 273 SGSGNG--DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
P+E R IL+IH+ KM L ++L+++A + SGAEL+ V A FAL
Sbjct: 331 PNPNEESRFDILKIHSRKMN----LMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
Query: 457 Q 457
+
Sbjct: 387 R 387
>UNIPROTKB|O43933 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0016558 "protein import into peroxisome matrix"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0006625 "protein targeting to peroxisome"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042623 "ATPase activity, coupled" evidence=IMP]
[GO:0060152 "microtubule-based peroxisome localization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IMP] [GO:0007031 "peroxisome organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0032403 GO:GO:0005778 EMBL:CH471091
EMBL:CH236949 GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AC007566 GO:GO:0042623
Orphanet:912 EMBL:AC000064 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44
GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12 EMBL:AF030356
EMBL:AF026086 EMBL:AB008112 EMBL:AB052090 EMBL:AB052091
EMBL:AB052092 EMBL:AK292955 EMBL:BC035575 IPI:IPI00411291
RefSeq:NP_000457.1 UniGene:Hs.164682 ProteinModelPortal:O43933
SMR:O43933 IntAct:O43933 STRING:O43933 PhosphoSite:O43933
PaxDb:O43933 PRIDE:O43933 DNASU:5189 Ensembl:ENST00000248633
Ensembl:ENST00000428214 GeneID:5189 KEGG:hsa:5189 UCSC:uc003uly.3
CTD:5189 GeneCards:GC07M092116 HGNC:HGNC:8850 HPA:HPA020235
MIM:214100 MIM:601539 MIM:602136 neXtProt:NX_O43933
PharmGKB:PA33192 HOVERGEN:HBG008169 InParanoid:O43933 OMA:HSWEKEK
PhylomeDB:O43933 GenomeRNAi:5189 NextBio:20068 ArrayExpress:O43933
Bgee:O43933 CleanEx:HS_PEX1 Genevestigator:O43933
GermOnline:ENSG00000127980 InterPro:IPR015343 Pfam:PF09263
Uniprot:O43933
Length = 1283
Score = 385 (140.6 bits), Expect = 4.8e-32, P = 4.8e-32
Identities = 98/248 (39%), Positives = 145/248 (58%)
Query: 211 HKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLM 270
HK +L IGGL E I P + + L I+ G+LLYGPPGTGKTL+
Sbjct: 832 HKPRDLGWDKIGGLH-EVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLL 890
Query: 271 ARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDE 330
A I + + M V GPE+LSK++G +E+ +RD+F A+ + ++ FDE
Sbjct: 891 AGVIARE-SRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPC--------ILFFDE 941
Query: 331 IDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRL 390
++I RG D TGV D +VNQLLT++DGVE L V ++ T+R D++D ALLRPGRL
Sbjct: 942 FESIAPRRG--HDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRL 999
Query: 391 EVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAV 450
+ V PD+ RL+IL + ++ + LA DV+LQ +A+ T +++GA+L+ + +A
Sbjct: 1000 DKCVYCPPPDQVSRLEILNVLSDSLP----LADDVDLQHVASVTDSFTGADLKALLYNAQ 1055
Query: 451 SFALNRQL 458
AL+ L
Sbjct: 1056 LEALHGML 1063
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 358 (131.1 bits), Expect = 5.5e-32, P = 5.5e-32
Identities = 95/270 (35%), Positives = 148/270 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + + P ++GIK KG++LYGPPGTGKTL+A+ + +
Sbjct: 187 IGGLDNQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 245
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++V G E++ K++G+ K +R+LF AE G ++ DEIDAI R
Sbjct: 246 TFLRVV-GSELIQKYLGDGPKLVRELFRVAEE----HGPS----IVFIDEIDAIGTKRYD 296
Query: 341 TRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
+ G G + + +LL ++DG +S +V +I TNR + LD AL+RPGR++ ++E L
Sbjct: 297 SNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
PDE + +I QIHT++M LA DV L EL + SGA+++ + A AL R+
Sbjct: 356 PDEKTKKRIFQIHTSRMT----LADDVTLDELIMAKDDLSGADIKAICTEAGLMAL-RER 410
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
M V E K + ++FL+ E P
Sbjct: 411 RMK-----VTNEDFKKSKENFLYKKTEGTP 435
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 358 (131.1 bits), Expect = 5.5e-32, P = 5.5e-32
Identities = 90/242 (37%), Positives = 139/242 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL+ + +I + V P + LGI KG++LYGPPGTGKTL+AR + +
Sbjct: 150 VGGLTKQIKEI-KEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDC 208
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V+G E++ K++GE + +R+LF A + +I DEID+I GS
Sbjct: 209 KFIR-VSGAELVQKYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSI----GS 255
Query: 341 TR-DGTGVHDSIVN----QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVE 395
TR +G+G DS V +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 256 TRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIE 315
Query: 396 ISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN 455
P R +IL+IH+ KM L +NL+++A + SGA+++GV A +AL
Sbjct: 316 FPPPSVAARAEILRIHSRKMN----LTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALR 371
Query: 456 RQ 457
+
Sbjct: 372 ER 373
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 358 (131.1 bits), Expect = 5.5e-32, P = 5.5e-32
Identities = 93/237 (39%), Positives = 131/237 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ A + KLGI+ KG+LLYGPPGTGKTLMAR N
Sbjct: 172 IGGLEKQIQELVE-AIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 230
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD F A+ ++S +I DEIDAI R
Sbjct: 231 TFLKLA-GPQLVQMFIGDGAKLVRDAFLLAK-------EKSPC-IIFIDEIDAIGTKRFD 281
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S G + +LL ++DG S + + +I TNR D+LD AL+R GRL+ ++E P
Sbjct: 282 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHP 341
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
E R +ILQIH+ KM N+ DVN +ELA T +++GA+L+ V A AL R
Sbjct: 342 TEEARGRILQIHSRKMNVNA----DVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 394
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 358 (131.1 bits), Expect = 5.5e-32, P = 5.5e-32
Identities = 89/239 (37%), Positives = 135/239 (56%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL + +I + V P + LGI KG+LL+GPPGTGKTL+AR +
Sbjct: 161 VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTEC 219
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-- 338
+ V+G E++ KF+GE + +R+LF A + +I DEID+I SR
Sbjct: 220 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRVE 270
Query: 339 GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
GS+ + V +++ +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 271 GSSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPA 329
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
PDE R IL+IH+ KM L +N+ ++A + SGAE++ V A FAL +
Sbjct: 330 PDEKARADILKIHSRKMN----LMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRER 384
>TAIR|locus:2198748 [details] [associations]
symbol:AT1G05910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
EMBL:CP002684 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC009999
OMA:QDETENG EMBL:AY056785 EMBL:BT002728 IPI:IPI00523133
IPI:IPI00542285 PIR:B86194 RefSeq:NP_563753.1 UniGene:At.26297
ProteinModelPortal:F4IAE9 SMR:F4IAE9 PRIDE:F4IAE9
EnsemblPlants:AT1G05910.1 GeneID:837101 KEGG:ath:AT1G05910
GeneFarm:1906 TAIR:At1g05910 HOGENOM:HOG000030246 Uniprot:F4IAE9
Length = 1210
Score = 384 (140.2 bits), Expect = 5.6e-32, P = 5.6e-32
Identities = 116/349 (33%), Positives = 176/349 (50%)
Query: 189 ASNDSGIKIV--NQREGANSNIFR-HKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHV 245
A+ SG++ + + GA+ + +++ N IGGLS D+ F ++P
Sbjct: 350 AALTSGVQTAGPSSKGGADIQPLQINEDINFDD--IGGLSEYINDLKEMVFFPLLYPEFF 407
Query: 246 TSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIV----NGPEVLSKFVGETEK 301
S I +G+LL GPPGTGKTL+AR + + K+ G +VLSK+VGE E+
Sbjct: 408 AS-YSITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 466
Query: 302 NIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDG 361
++ LF +A+ +Q + +I FDEID + R S ++ +H+SIV+ LL +DG
Sbjct: 467 QLKLLFEEAQRNQPS--------IIFFDEIDGLAPVRSSKQEQ--IHNSIVSTLLALMDG 516
Query: 362 VESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFL 421
++S V+LIG TNR D +D AL RPGR + + SLP R +IL IHT K K
Sbjct: 517 LDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFSLPGCEARAEILDIHTRKWKH---- 572
Query: 422 APDVNL-QELAARTKNYSGAELEGVAKSAVSFALNR---QLSMDDLTKPVDEESIKVTMD 477
P L +ELAA Y GA+L+ + A A Q+ D +D + V
Sbjct: 573 PPTRELKEELAATCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKYAIDVGLVNVEKS 632
Query: 478 DFLHALYEIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQV 526
F+ A+ I PA A + +SR V H+H+ + +M L+ +
Sbjct: 633 HFVEAMSAITPA--AHRGSVVQSRPLSPVVLPCLHRHLLE-SMSLISDI 678
>UNIPROTKB|F1RR16 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 CTD:29028 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:CU582936 EMBL:CU469009
RefSeq:XP_001926065.4 UniGene:Ssc.23683 Ensembl:ENSSSCT00000006566
GeneID:100155780 KEGG:ssc:100155780 Uniprot:F1RR16
Length = 1388
Score = 384 (140.2 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 99/276 (35%), Positives = 149/276 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGLS A + ++P V K I+ +G L YGPPGTGKTL+AR + +
Sbjct: 424 VGGLSNHIAALKEMVVFPLLYP-EVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQ 482
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
+ ++ G + LSK+VGE+E+ +R LF DQ + S +I FDEID +
Sbjct: 483 GDKRVAFFMRKGADCLSKWVGESERQLRLLF-----DQAYQMRPS---IIFFDEIDGLAP 534
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG++S +++IG TNR D +D AL RPGR + +
Sbjct: 535 VRSSRQDQ--IHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 592
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
SLPD++ R +IL+IHT D+ L+ELA Y GA+++ + A AL R
Sbjct: 593 SLPDKDARKEILKIHTRDWNPKPL---DMFLEELAENCVGYCGADIKSICSEAALCALRR 649
Query: 457 QLSMDDLTKP---VDEESIKVTMDDFLHALYEIVPA 489
+ T +D SI ++ DF A+ +++PA
Sbjct: 650 RYPQIYTTSEKLQLDLSSITISAKDFEVAMQKMIPA 685
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 357 (130.7 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 85/237 (35%), Positives = 131/237 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL + ++ + V P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 181 VGGLDQQVKEV-KEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDC 239
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V+G E++ K++GE + +R+LF A + +I DEID+I R
Sbjct: 240 TFIR-VSGSELVQKYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSIGSQRIE 290
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPD 400
G + +LL ++DG ES N+ +I TNR D+LDEALLRPGR++ ++E P+
Sbjct: 291 GEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPN 350
Query: 401 ENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
R++IL+IH+ KM L +++ ++A N SGAE++ V A FAL +
Sbjct: 351 VEARMEILKIHSRKMN----LMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRER 403
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 357 (130.7 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 85/237 (35%), Positives = 131/237 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL + ++ + V P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 181 VGGLDQQVKEV-KEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDC 239
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V+G E++ K++GE + +R+LF A + +I DEID+I R
Sbjct: 240 TFIR-VSGSELVQKYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSIGSQRIE 290
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPD 400
G + +LL ++DG ES N+ +I TNR D+LDEALLRPGR++ ++E P+
Sbjct: 291 GEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPN 350
Query: 401 ENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
R++IL+IH+ KM L +++ ++A N SGAE++ V A FAL +
Sbjct: 351 VEARMEILKIHSRKMN----LMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRER 403
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 357 (130.7 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 86/254 (33%), Positives = 142/254 (55%)
Query: 207 NIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTG 266
N+ N+ +GGL + ++ R + + P + ++GIK KG+LLYGPPGTG
Sbjct: 127 NMLHEDPGNISYSAVGGLGDQIREL-RESIELPLMNPELFLRVGIKPPKGVLLYGPPGTG 185
Query: 267 KTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVI 326
KTL+AR I ++ K+V+ ++ K++GE+ + IR++F A Q +I
Sbjct: 186 KTLLARAIASNIDANFLKVVSSA-IIDKYIGESARLIREMFNYAREHQPC--------II 236
Query: 327 IFDEIDAICKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEA 383
DEIDAI R S +GT I + +LL ++DG ++L V +I TNR D+LD A
Sbjct: 237 FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPA 294
Query: 384 LLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELE 443
LLRPGRL+ ++EI LP+E R+ IL+IH + ++ +++ + + + ++GA+L
Sbjct: 295 LLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHG----EIDYEAIVKLAEGFNGADLR 350
Query: 444 GVAKSAVSFALNRQ 457
+ A FA+ +
Sbjct: 351 NICTEAGMFAIRAE 364
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 393 (143.4 bits), Expect = 8.1e-32, Sum P(2) = 8.1e-32
Identities = 108/306 (35%), Positives = 177/306 (57%)
Query: 201 REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLY 260
+E +S+I K N+ +GGL+ ++I + PH+ + GI G+LL+
Sbjct: 901 QEYQSSSIGAPKIPNVSWDDVGGLANVKSEIMD-TIQLPLEHPHLFAS-GIGKRSGILLF 958
Query: 261 GPPGTGKTLMARQIGK--MLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRG 318
GPPGTGKTL+A+ I LN + V GPE+++ ++GE+EKNIR++F N R
Sbjct: 959 GPPGTGKTLLAKAIATECSLNFLS---VKGPELINMYIGESEKNIREIF----NKAR--- 1008
Query: 319 DQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKD 378
Q+ VI FDE+D++ SRG+ D GV D +V+QLL ++DG++ ++V +IG TNR D
Sbjct: 1009 -QAKPCVIFFDELDSLAPSRGNGADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPD 1067
Query: 379 MLDEALLRPGRLE--VQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTK- 435
+LD +L+RPGRL+ + + IS EN + +ILQ T K LA DV+L+++
Sbjct: 1068 LLDSSLMRPGRLDRLLYLGISSEKEN-QFKILQALTRKFN----LADDVDLRKVVENCPM 1122
Query: 436 NYSGAELEGVAKSAVSFALNRQLSMD---DLTKPVDEESIKVTMDDFLHALYEIVPAFGA 492
N +GA+ +A A+S A + +++ ++ + + + V + F+ A+ +VP+
Sbjct: 1123 NLTGADFYALASDAMSNAFHERITASINGEINEEEQNQKLIVYQNHFIKAVNSLVPS--V 1180
Query: 493 STDDLE 498
S D+LE
Sbjct: 1181 SLDELE 1186
Score = 146 (56.5 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 89/363 (24%), Positives = 163/363 (44%)
Query: 257 MLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEK--NIRDLFADAENDQ 314
+LL GP G GK + ++ K + G+ V+ + L FV E++K NIR++ A N
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQM-GIHVYEVDCYK-LYDFV-ESKKDWNIRNVLEQASNST 726
Query: 315 RTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDG-VESLNN---VLL 370
T L + F+ ++ +S + + + +++N L D ++N+ L+
Sbjct: 727 PTL-----LILKNFEVLEQTAQSMQQEKKESNLSQTLINILKDINDSNTSNINSNKYPLI 781
Query: 371 IGMT-NRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQE 429
I +T N D L + + E+ ++ PDEN R +IL+ T + + + V+++
Sbjct: 782 ITVTVNSMDELSNKVRNWFKHEIT--LNSPDENQRFKILKYLTKNLPID--IGNTVSIKN 837
Query: 430 LAARTKNYSGAELEG-VAKSAVSFALNRQLS----MDDLTKPVDEES--IKVTMDDFLHA 482
L+ RT ++ + L + +S+++ AL R LS M+D KP++ + V DD +
Sbjct: 838 LSIRTASFLNSNLRALIQRSSIN-ALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKS 896
Query: 483 LYEIVP----AFGA------STDDLE-----RSRLNGMVDCGDRHKHIYQRAMLLVEQVK 527
L E+ + GA S DD+ +S + + H H++
Sbjct: 897 LSEMQEYQSSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFASG-------- 948
Query: 528 VSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVF 587
+ K S + LL GP G+GKT LA + F+ + E +I ++ I ++F
Sbjct: 949 IGKRSGI---LLFGPPGTGKTLLAKAIATECSLNFLSVKGPE-LINMYIGESEKNIREIF 1004
Query: 588 EDA 590
A
Sbjct: 1005 NKA 1007
Score = 38 (18.4 bits), Expect = 8.1e-32, Sum P(2) = 8.1e-32
Identities = 19/96 (19%), Positives = 42/96 (43%)
Query: 115 KKGSKNEQVDAVLLANQLRKRFI--NQVM-TAGQRVVFEYHGNNYIFTVNGAAVEGQEKS 171
+ S +++ L N+ + ++ N ++ + +V E H + F+ +E
Sbjct: 167 ESSSSTTTINSKYLVNEEFRNYLVENSILFQSPNNIVIENHQKHKSFSYK--VLE----C 220
Query: 172 NALERGIITNETYFVFEASNDSGIKIVNQREGANSN 207
L +G ++N T + + +D KI+N N+N
Sbjct: 221 FPLLQGTVSNSTTIIIISPDD---KILNTLPSNNNN 253
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 356 (130.4 bits), Expect = 9.1e-32, P = 9.1e-32
Identities = 93/241 (38%), Positives = 134/241 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + V P LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 146 IGGLDKQIKEI-KEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 204
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V+G E++ KF+GE + +R+LF A + +I DEID+I GS
Sbjct: 205 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSI----GS 251
Query: 341 TRDGTGVHDSIVN----QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
+G DS V +LL ++DG E+ N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 252 RLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEF 311
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
P+E RL IL+IH+ KM L +NL+++A SGAE++GV A +AL
Sbjct: 312 PPPNEEARLDILKIHSRKMN----LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 367
Query: 457 Q 457
+
Sbjct: 368 R 368
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 356 (130.4 bits), Expect = 9.1e-32, P = 9.1e-32
Identities = 87/254 (34%), Positives = 143/254 (56%)
Query: 207 NIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTG 266
N+ N+ +GGLS + ++ R + + P + ++GIK KG+LLYGPPGTG
Sbjct: 128 NMLHEDPGNVSYSAVGGLSDQIREL-RESIELPLMNPELFLRVGIKPPKGVLLYGPPGTG 186
Query: 267 KTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVI 326
KTL+AR I ++ KIV+ ++ K++GE+ + IR++F A + Q +I
Sbjct: 187 KTLLARAIASNIDANFLKIVSSA-IIDKYIGESARLIREMFGYARDHQPC--------II 237
Query: 327 IFDEIDAICKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEA 383
DEIDAI R S +GT I + +LL ++DG + L V +I TNR D+LD A
Sbjct: 238 FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPA 295
Query: 384 LLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELE 443
LLRPGRL+ ++EI LP+E R+++L+IH + ++ +++ + + + ++GA+L
Sbjct: 296 LLRPGRLDRKIEIPLPNEQARMEVLKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLR 351
Query: 444 GVAKSAVSFALNRQ 457
V A A+ +
Sbjct: 352 NVCTEAGMAAIRAE 365
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 356 (130.4 bits), Expect = 9.1e-32, P = 9.1e-32
Identities = 95/256 (37%), Positives = 137/256 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSK---LGIKHVKGMLLYGPPGTGKTLMARQIGKM 277
+GGL + ++ V P K +GI+ KG L+YGPPGTGKTL+AR
Sbjct: 183 VGGLDKQIEELVEAI----VLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQ 238
Query: 278 LNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS 337
N K+ P+++ ++GE K +RD FA A+ T +I DE+DAI
Sbjct: 239 TNATFLKLA-APQLVQMYIGEGAKLVRDAFALAKEKAPT--------IIFIDELDAIGTK 289
Query: 338 R-GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S + G + +LL ++DG S + V ++ TNR D+LD ALLR GRL+ ++E
Sbjct: 290 RFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEF 349
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFAL-N 455
LP E+ R QILQIH+ KM + D+N QELA T ++GA+L+ V A AL N
Sbjct: 350 PLPSEDSRAQILQIHSRKMTTDD----DINWQELARSTDEFNGAQLKAVTVEAGMIALRN 405
Query: 456 RQLSM--DDLTKPVDE 469
Q S+ +D + + E
Sbjct: 406 GQSSVKHEDFVEGISE 421
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 356 (130.4 bits), Expect = 9.1e-32, P = 9.1e-32
Identities = 91/237 (38%), Positives = 127/237 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ A + KLG++ KG+LLYGPPGTGKTLMAR N
Sbjct: 173 IGGLEKQIQELVE-AIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNA 231
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD F A+ +I DEIDAI R
Sbjct: 232 TFLKLA-GPQLVQMFIGDGAKLVRDAFQLAKEKAPC--------IIFIDEIDAIGTKRFD 282
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S G + +LL ++DG S + +I TNR D+LD AL+R GRL+ ++E P
Sbjct: 283 SEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHP 342
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
E R +ILQIH+ KM + PDVN +ELA T +++GA+L+ V A AL R
Sbjct: 343 TEEARARILQIHSRKMNVH----PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 395
>UNIPROTKB|E2RCK9 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011992 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 Pfam:PF13499 PRINTS:PR00450
PROSITE:PS00674 PROSITE:PS50222 SMART:SM00054 SMART:SM00382
Prosite:PS00018 GO:GO:0005524 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 GO:GO:0005778 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0006625
PANTHER:PTHR23077:SF12 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307
Ensembl:ENSCAFT00000038397 Uniprot:E2RCK9
Length = 1416
Score = 394 (143.8 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 99/252 (39%), Positives = 149/252 (59%)
Query: 207 NIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTG 266
N+ HK +L IGGL E I P + + L I+ G+LLYGPPGTG
Sbjct: 961 NVNLHKPRDLGWDKIGGLH-EVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTG 1019
Query: 267 KTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVI 326
KTL+A I + +GM V GPE+LSK++G +E+ +RD+F A+ + ++
Sbjct: 1020 KTLLAGVIARE-SGMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPC--------IL 1070
Query: 327 IFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLR 386
FDE ++I RG D TGV D +VNQLLT++DGVE L V ++ T+R D++D ALLR
Sbjct: 1071 FFDEFESIAPRRG--HDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLR 1128
Query: 387 PGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVA 446
PGRL+ V PD+ RL+IL + ++ + LA DV+LQ +A+ T +++GA+L+ +
Sbjct: 1129 PGRLDKCVYCPPPDQVSRLEILNVLSDSLP----LADDVDLQHVASVTNSFTGADLKALL 1184
Query: 447 KSAVSFALNRQL 458
+A A++ +L
Sbjct: 1185 YNAQLEAVHGRL 1196
Score = 38 (18.4 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 178 IITNETYFVFEASNDSGI 195
++ N +F F+ ND+ I
Sbjct: 67 MLMNRVFFAFDKDNDNCI 84
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 380 (138.8 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 84/217 (38%), Positives = 128/217 (58%)
Query: 248 KLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLF 307
++G + G+L++GPPG KTLMAR + + V GPE+ SK+VGE+EK +R LF
Sbjct: 752 RIGTRPPSGILMFGPPGCSKTLMARAVASEAK-LNFLAVKGPELFSKWVGESEKAVRSLF 810
Query: 308 ADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNN 367
A A + + +I FDEID++ RG DG V D +++QLL ++DG+
Sbjct: 811 AKARANAPS--------IIFFDEIDSLASIRGKENDGVSVSDRVMSQLLVELDGLHQRVG 862
Query: 368 VLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNL 427
V +I TNR D +D ALLRPGR + + + P+E R IL+IH K+ +S D+ L
Sbjct: 863 VTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSS----DICL 918
Query: 428 QELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLT 464
+ELA+ TK Y+GA++ + + A AL L M++++
Sbjct: 919 KELASITKGYTGADISLICREAAIAALEESLEMEEIS 955
Score = 343 (125.8 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 97/318 (30%), Positives = 157/318 (49%)
Query: 157 IFTVNGAAVEGQEKSNALERGIITNETYFVFEASNDSGIKIVNQREGANSNIFRHKEFNL 216
IF V A + SN +I ET + D +I + +
Sbjct: 323 IFCVKRADKRPSDTSNRNHAFMINQETKVYLHHTLDLASEIQGRTFVQGLQFDEGENVGC 382
Query: 217 QSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGK 276
+ +GGLS E+A I R S ++S LG++ KG+L++GPPGTGKT +AR +
Sbjct: 383 EISKLGGLSKEYA-ILRDIIDSSSIKNSLSS-LGLRPTKGVLIHGPPGTGKTSLARTFAR 440
Query: 277 MLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
+G+ VNGPE++S+++GE+EK + ++F A N V+ D++DAI
Sbjct: 441 H-SGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPA--------VVFIDDLDAIAP 491
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
+R G + +V LL +DG+ + V++I TNR D ++ AL RPGRL+ ++EI
Sbjct: 492 AR--KEGGEELSQRMVATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEI 549
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+P R IL I M+ + L+ ++ +++LA T + GA+L + A L R
Sbjct: 550 GVPSSTQRSDILHIILRGMRHS--LS-NIQVEQLAMATHGFVGADLSALCCEAAFVCLRR 606
Query: 457 QLSMDDLTK--PVDEESI 472
L + P++E I
Sbjct: 607 HLDQSSSSSNLPLEEAPI 624
Score = 48 (22.0 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 29/134 (21%), Positives = 55/134 (41%)
Query: 443 EGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDDFLHALYEIVPAFGASTDDLERSRL 502
E V+ A N + + + E ++ V +DF +A +I P+ LE ++
Sbjct: 663 ETVSLVADDIQNNGNSCSEQMLRKQGEHTLSVGFEDFENAKTKIRPSAMREVI-LEVPKV 721
Query: 503 NGMVDCGDRHKHIYQRAMLLVEQVKVSKGS-------PLVTCLLEGPSGSGKTALAATAG 555
N D G +++ + + M VE + + + P L+ GP G KT +A
Sbjct: 722 N-WEDVGGQNE-VKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVA 779
Query: 556 IDSDFPFVKIISAE 569
++ F+ + E
Sbjct: 780 SEAKLNFLAVKGPE 793
>UNIPROTKB|Q6PL18 [details] [associations]
symbol:ATAD2 "ATPase family AAA domain-containing protein
2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006355 GO:GO:0006200 GO:GO:0006351
GO:GO:0016887 eggNOG:COG0464 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 EMBL:AY598335 EMBL:CR749832 EMBL:AL833653
EMBL:BC010686 EMBL:BC019909 EMBL:BC113656 EMBL:AK097133
EMBL:AF118088 IPI:IPI00170548 IPI:IPI00470801 RefSeq:NP_054828.2
UniGene:Hs.370834 PDB:3DAI PDBsum:3DAI ProteinModelPortal:Q6PL18
SMR:Q6PL18 DIP:DIP-46197N STRING:Q6PL18 PhosphoSite:Q6PL18
DMDM:74762365 PaxDb:Q6PL18 PRIDE:Q6PL18 DNASU:29028
Ensembl:ENST00000287394 GeneID:29028 KEGG:hsa:29028 UCSC:uc003yqh.4
CTD:29028 GeneCards:GC08M124401 H-InvDB:HIX0007764 HGNC:HGNC:30123
HPA:CAB056158 HPA:HPA019860 HPA:HPA029424 MIM:611941
neXtProt:NX_Q6PL18 PharmGKB:PA134895566 HOVERGEN:HBG080873
InParanoid:Q6PL18 OMA:PSVYENG OrthoDB:EOG441Q9S PhylomeDB:Q6PL18
ChiTaRS:ATAD2 EvolutionaryTrace:Q6PL18 GenomeRNAi:29028
NextBio:51959 ArrayExpress:Q6PL18 Bgee:Q6PL18 CleanEx:HS_ATAD2
Genevestigator:Q6PL18 GermOnline:ENSG00000156802 Uniprot:Q6PL18
Length = 1390
Score = 382 (139.5 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 99/276 (35%), Positives = 147/276 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGLS A + ++P V K I+ +G L YGPPGTGKTL+AR + +
Sbjct: 428 VGGLSNHIAALKEMVVFPLLYP-EVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQ 486
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
+ ++ G + LSK+VGE+E+ +R LF DQ + S +I FDEID +
Sbjct: 487 GDKRVAFFMRKGADCLSKWVGESERQLRLLF-----DQAYQMRPS---IIFFDEIDGLAP 538
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG++S +++IG TNR D +D AL RPGR + +
Sbjct: 539 VRSSRQDQ--IHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 596
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
SLPD+ R +IL+IHT D L+ELA Y GA+++ + A AL R
Sbjct: 597 SLPDKEARKEILKIHTRDWNPKPL---DTFLEELAENCVGYCGADIKSICAEAALCALRR 653
Query: 457 QLSMDDLTKP---VDEESIKVTMDDFLHALYEIVPA 489
+ T +D SI ++ DF A+ +++PA
Sbjct: 654 RYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMIPA 689
>CGD|CAL0002247 [details] [associations]
symbol:PEX1 species:5476 "Candida albicans" [GO:0016887
"ATPase activity" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0016562 "protein
import into peroxisome matrix, receptor recycling"
evidence=IEA;ISO] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004675 "transmembrane receptor protein
serine/threonine kinase activity" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777
GO:GO:0016887 GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0042623 GO:GO:0016562 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1 RefSeq:XP_721303.1
RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73 STRING:Q5AH73
GeneID:3636943 GeneID:3637485 GeneID:3704188 KEGG:cal:CaO19.13818
KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460 Uniprot:Q5AH73
Length = 1091
Score = 382 (139.5 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 93/253 (36%), Positives = 150/253 (59%)
Query: 221 IGGLSAEFADIFRRA--FASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKML 278
IGGL E +I + ++ P L ++ G+LLYG PG GKTL+A I
Sbjct: 737 IGGLK-EAKNILLETLEWPTKYAPIFANCPLRLR--SGILLYGYPGCGKTLLASAIAGQC 793
Query: 279 NGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR 338
G+ + GPE+L+K++G +E+++R+LF A+ + ++ FDE D+I R
Sbjct: 794 -GLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPC--------ILFFDEFDSIAPKR 844
Query: 339 GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
G D TGV D +VNQ+LT++DG E L+ V ++ T+R D++D ALLRPGRL+ V +
Sbjct: 845 G--HDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDM 902
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
P+ RL ILQ T KM L+ DVNL E+A +T +SGA+++G+ +A A++ +
Sbjct: 903 PNYEDRLDILQSITTKMD----LSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVH--V 956
Query: 459 SMDDLTKPVDEES 471
++++L++ +E+
Sbjct: 957 TLEELSQREQDEA 969
Score = 132 (51.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 83/343 (24%), Positives = 143/343 (41%)
Query: 256 GMLLYGPPGTGKTLMARQIGKMLN---GMEPKIVNGPEVLSKFVGETEKNIRDLFADAEN 312
G L+YG G+GKTL+ + + + LN G K ++ ++++ KN F +
Sbjct: 493 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKN--HFFKWIQT 550
Query: 313 DQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHD--SIVNQLLTKIDGVESLN-NVL 369
+ V+I D ID + D T + LTKI LN N+
Sbjct: 551 CAWNKPS-----VLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIH--HQLNSNLS 603
Query: 370 LIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIH-TNKMKENSFLAPDVNLQ 428
++ N KD +++ LL +E ++ PD++ R +IL + TNK+ L V+L
Sbjct: 604 ILLSANSKDNINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLG----LKIKVDLM 659
Query: 429 ELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
+L + T+ Y +L+ ++ L + T+ + VT + AL P
Sbjct: 660 DLVSETEGYLPNDLKILSDRIYHEVLFNSTETETETETEATTNAAVTSEHIEKALAGYTP 719
Query: 489 AFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVK-VSKGSPL-VTC--------L 538
+ L++S +N D G + + +L+E ++ +K +P+ C L
Sbjct: 720 S-NLRGVKLQKSSINWS-DIGG----LKEAKNILLETLEWPTKYAPIFANCPLRLRSGIL 773
Query: 539 LEGPSGSGKTALAATAGIDSDFPFVKIISAESM---IGLHEST 578
L G G GKT LA+ F+ I E + IG E +
Sbjct: 774 LYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQS 816
Score = 46 (21.3 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 21/80 (26%), Positives = 34/80 (42%)
Query: 659 FSVTYHVPTLKTDDAKKVLKQLNVFA---EEDVDSASEALNDMPIKKLYMLIEMXXXXXX 715
F V LKT++ ++L Q+ F +++ DS +A D + K +LI
Sbjct: 986 FQVGNSEKKLKTNEKIQLLHQIQQFMNPNKDNSDSERKAGQDA-MNKSKVLITHENFLES 1044
Query: 716 XXXXXXIYSGREKIKISHFY 735
S EKIK++ Y
Sbjct: 1045 LKETKPSISHSEKIKLTKIY 1064
Score = 38 (18.4 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 467 VDEESIKVTMDDFLHALYEIVPAFGAS 493
+++ + +T ++FL +L E P+ S
Sbjct: 1029 MNKSKVLITHENFLESLKETKPSISHS 1055
>UNIPROTKB|Q5AH73 [details] [associations]
symbol:PEX1 "Likely peroxisomal biogenesis AAA ATPase Pex1"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0016562 "protein import into peroxisome matrix, receptor
recycling" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AACQ01000020 EMBL:AACQ01000016 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1
RefSeq:XP_721303.1 RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73
STRING:Q5AH73 GeneID:3636943 GeneID:3637485 GeneID:3704188
KEGG:cal:CaO19.13818 KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460
Uniprot:Q5AH73
Length = 1091
Score = 382 (139.5 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 93/253 (36%), Positives = 150/253 (59%)
Query: 221 IGGLSAEFADIFRRA--FASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKML 278
IGGL E +I + ++ P L ++ G+LLYG PG GKTL+A I
Sbjct: 737 IGGLK-EAKNILLETLEWPTKYAPIFANCPLRLR--SGILLYGYPGCGKTLLASAIAGQC 793
Query: 279 NGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR 338
G+ + GPE+L+K++G +E+++R+LF A+ + ++ FDE D+I R
Sbjct: 794 -GLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPC--------ILFFDEFDSIAPKR 844
Query: 339 GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
G D TGV D +VNQ+LT++DG E L+ V ++ T+R D++D ALLRPGRL+ V +
Sbjct: 845 G--HDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDM 902
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
P+ RL ILQ T KM L+ DVNL E+A +T +SGA+++G+ +A A++ +
Sbjct: 903 PNYEDRLDILQSITTKMD----LSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVH--V 956
Query: 459 SMDDLTKPVDEES 471
++++L++ +E+
Sbjct: 957 TLEELSQREQDEA 969
Score = 132 (51.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 83/343 (24%), Positives = 143/343 (41%)
Query: 256 GMLLYGPPGTGKTLMARQIGKMLN---GMEPKIVNGPEVLSKFVGETEKNIRDLFADAEN 312
G L+YG G+GKTL+ + + + LN G K ++ ++++ KN F +
Sbjct: 493 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKN--HFFKWIQT 550
Query: 313 DQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHD--SIVNQLLTKIDGVESLN-NVL 369
+ V+I D ID + D T + LTKI LN N+
Sbjct: 551 CAWNKPS-----VLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIH--HQLNSNLS 603
Query: 370 LIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIH-TNKMKENSFLAPDVNLQ 428
++ N KD +++ LL +E ++ PD++ R +IL + TNK+ L V+L
Sbjct: 604 ILLSANSKDNINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLG----LKIKVDLM 659
Query: 429 ELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
+L + T+ Y +L+ ++ L + T+ + VT + AL P
Sbjct: 660 DLVSETEGYLPNDLKILSDRIYHEVLFNSTETETETETEATTNAAVTSEHIEKALAGYTP 719
Query: 489 AFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVK-VSKGSPL-VTC--------L 538
+ L++S +N D G + + +L+E ++ +K +P+ C L
Sbjct: 720 S-NLRGVKLQKSSINWS-DIGG----LKEAKNILLETLEWPTKYAPIFANCPLRLRSGIL 773
Query: 539 LEGPSGSGKTALAATAGIDSDFPFVKIISAESM---IGLHEST 578
L G G GKT LA+ F+ I E + IG E +
Sbjct: 774 LYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQS 816
Score = 46 (21.3 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 21/80 (26%), Positives = 34/80 (42%)
Query: 659 FSVTYHVPTLKTDDAKKVLKQLNVFA---EEDVDSASEALNDMPIKKLYMLIEMXXXXXX 715
F V LKT++ ++L Q+ F +++ DS +A D + K +LI
Sbjct: 986 FQVGNSEKKLKTNEKIQLLHQIQQFMNPNKDNSDSERKAGQDA-MNKSKVLITHENFLES 1044
Query: 716 XXXXXXIYSGREKIKISHFY 735
S EKIK++ Y
Sbjct: 1045 LKETKPSISHSEKIKLTKIY 1064
Score = 38 (18.4 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 467 VDEESIKVTMDDFLHALYEIVPAFGAS 493
+++ + +T ++FL +L E P+ S
Sbjct: 1029 MNKSKVLITHENFLESLKETKPSISHS 1055
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 354 (129.7 bits), Expect = 1.5e-31, P = 1.5e-31
Identities = 90/253 (35%), Positives = 143/253 (56%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS + ++ R + P + ++GI KG LLYGPPGTGKTL+AR + L+
Sbjct: 135 IGGLSEQIREL-REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDC 193
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
K+V+ ++ K++GE+ + IR++F A + Q +I DEIDAI R S
Sbjct: 194 NFLKVVSS-SIVDKYIGESARLIREMFNYARDHQPC--------IIFMDEIDAIGGRRFS 244
Query: 341 TRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
+GT I + +LL ++DG ++L+ V +I TNR D LD ALLRPGRL+ ++ I
Sbjct: 245 --EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIE 302
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFAL--- 454
LP+E RL IL+IH+ + ++ D++ + + + ++GA+L V A FA+
Sbjct: 303 LPNEQARLDILKIHSGPITKHG----DIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRAD 358
Query: 455 NRQLSMDDLTKPV 467
+ ++ +D K V
Sbjct: 359 HEYVTQEDFMKAV 371
>ZFIN|ZDB-GENE-070530-1 [details] [associations]
symbol:pex1 "peroxisome biogenesis factor 1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0005778 "peroxisomal membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070530-1 GO:GO:0005524 GO:GO:0005778
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 InterPro:IPR015343
Pfam:PF09263 GeneTree:ENSGT00550000075032 EMBL:CU634017
EMBL:CU928445 IPI:IPI01006424 RefSeq:XP_003200668.1
Ensembl:ENSDART00000114077 Ensembl:ENSDART00000123385
GeneID:100534854 KEGG:dre:100534854 Uniprot:F1Q805
Length = 1237
Score = 380 (138.8 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 86/216 (39%), Positives = 133/216 (61%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P + S L ++ G+LLYG PGTGKTL+A + K +GM + GPE+LSK++G +E+
Sbjct: 819 PLLFSSLPLRQCSGVLLYGAPGTGKTLLAGAVAKE-SGMNFISIKGPELLSKYIGASEQA 877
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+RD+F R Q+ ++ FDE D++ RG D TGV D +VNQLLT++DGV
Sbjct: 878 VRDVFQ--------RAQQAKPCILFFDEFDSLAPRRG--HDNTGVTDRVVNQLLTQLDGV 927
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLA 422
E L V ++ ++R D++D ALLRPGRL+ + PD RL+IL+ T+ + LA
Sbjct: 928 EGLTGVYVLAASSRPDLIDPALLRPGRLDKSLYCPPPDRAARLEILRALTHSVP----LA 983
Query: 423 PDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
DV+L ++A T+ ++GA+L+ + +A A++ L
Sbjct: 984 ADVDLDQIAGATELFTGADLKALLYNAQLEAIHSSL 1019
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 376 (137.4 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 99/273 (36%), Positives = 151/273 (55%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P + K+GI G+L++GPPG GKTL+A+ + I GPE+L+K+VGE+EK
Sbjct: 545 PELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISI-KGPELLNKYVGESEKA 603
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R +F QR R S +I FDE+DA+ R ++ + +VN LLT++DG+
Sbjct: 604 VRQVF------QRARA--STPCIIFFDELDALVPRRDTSMSESS--SRVVNTLLTELDGL 653
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLA 422
V +IG TNR DM+D A+LRPGRL+ + I LP RL+IL+ T NS L
Sbjct: 654 NDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILK--TLVRTSNSPLH 711
Query: 423 PDVNLQELA--ARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD----------EE 470
+V+L ++ +R N+SGA+L + K A +AL ++ + + +D E+
Sbjct: 712 ANVDLNAISRDSRCGNFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGED 771
Query: 471 SIKVTMDDFLHALYEIVPAFGASTDDLERSRLN 503
I +T +DF HAL I P+ + D + +LN
Sbjct: 772 DISITAEDFDHALSSIRPSV-SDRDRMRYEKLN 803
Score = 290 (107.1 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 91/277 (32%), Positives = 144/277 (51%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ +GG+ + + + P + S G++ +G+LLYGPPG GKT +A +
Sbjct: 189 NIDLSSLGGVESVTTQLLE-IIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANAL 247
Query: 275 GKMLNGMEPKI-VNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDA 333
L P I ++ P V+S GE+EK +R++F +A+ Q +I DEIDA
Sbjct: 248 AGELK--VPFINISAPSVVSGMSGESEKKLREIFEEAK--------QIAPCLIFMDEIDA 297
Query: 334 ICKSR--GSTRDGTGVHDSIVNQLLTKIDGV--ESLNN--VLLIGMTNRKDMLDEALLRP 387
I R G+ R+ + IV QLLT +D + E V++IG TNR D LD AL R
Sbjct: 298 ITPKRDGGAQRE---MEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRA 354
Query: 388 GRLEVQVEISLPDENGRLQILQIHTNKMK-ENSFLAPDVNLQELAARTKNYSGAELEGVA 446
GR + ++ +++P+E R+ IL+ T +K EN N +EL+ T Y GA+L+ +
Sbjct: 355 GRFDREICLNVPNEEQRISILKAMTKNIKLENG---EHFNYRELSKLTPGYVGADLKSLV 411
Query: 447 KSAVSFALNRQL-SMDDLTKPVDEESIKVTMDDFLHA 482
+A A+ R +M +L + + S+K DD + A
Sbjct: 412 TAAGISAIKRIFETMSELQE--ESHSVK---DDSMDA 443
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 376 (137.4 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 99/273 (36%), Positives = 151/273 (55%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P + K+GI G+L++GPPG GKTL+A+ + I GPE+L+K+VGE+EK
Sbjct: 545 PELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISI-KGPELLNKYVGESEKA 603
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R +F QR R S +I FDE+DA+ R ++ + +VN LLT++DG+
Sbjct: 604 VRQVF------QRARA--STPCIIFFDELDALVPRRDTSMSESS--SRVVNTLLTELDGL 653
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLA 422
V +IG TNR DM+D A+LRPGRL+ + I LP RL+IL+ T NS L
Sbjct: 654 NDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILK--TLVRTSNSPLH 711
Query: 423 PDVNLQELA--ARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD----------EE 470
+V+L ++ +R N+SGA+L + K A +AL ++ + + +D E+
Sbjct: 712 ANVDLNAISRDSRCGNFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGED 771
Query: 471 SIKVTMDDFLHALYEIVPAFGASTDDLERSRLN 503
I +T +DF HAL I P+ + D + +LN
Sbjct: 772 DISITAEDFDHALSSIRPSV-SDRDRMRYEKLN 803
Score = 290 (107.1 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 91/277 (32%), Positives = 144/277 (51%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ +GG+ + + + P + S G++ +G+LLYGPPG GKT +A +
Sbjct: 189 NIDLSSLGGVESVTTQLLE-IIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANAL 247
Query: 275 GKMLNGMEPKI-VNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDA 333
L P I ++ P V+S GE+EK +R++F +A+ Q +I DEIDA
Sbjct: 248 AGELK--VPFINISAPSVVSGMSGESEKKLREIFEEAK--------QIAPCLIFMDEIDA 297
Query: 334 ICKSR--GSTRDGTGVHDSIVNQLLTKIDGV--ESLNN--VLLIGMTNRKDMLDEALLRP 387
I R G+ R+ + IV QLLT +D + E V++IG TNR D LD AL R
Sbjct: 298 ITPKRDGGAQRE---MEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRA 354
Query: 388 GRLEVQVEISLPDENGRLQILQIHTNKMK-ENSFLAPDVNLQELAARTKNYSGAELEGVA 446
GR + ++ +++P+E R+ IL+ T +K EN N +EL+ T Y GA+L+ +
Sbjct: 355 GRFDREICLNVPNEEQRISILKAMTKNIKLENG---EHFNYRELSKLTPGYVGADLKSLV 411
Query: 447 KSAVSFALNRQL-SMDDLTKPVDEESIKVTMDDFLHA 482
+A A+ R +M +L + + S+K DD + A
Sbjct: 412 TAAGISAIKRIFETMSELQE--ESHSVK---DDSMDA 443
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 353 (129.3 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 90/254 (35%), Positives = 142/254 (55%)
Query: 207 NIFRHKEFNLQSLG-IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGT 265
++ + ++ L+S IGGL A+ +I + A + P + +GIK KG++LYG PGT
Sbjct: 175 SVMKVEKAPLESYADIGGLEAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGT 233
Query: 266 GKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHV 325
GKTL+A+ + + ++V G E++ K++G+ K +R+LF R D S +
Sbjct: 234 GKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELF-------RVADDLSP-SI 284
Query: 326 IIFDEIDAICKSRGSTRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEA 383
+ DEIDA+ R G G + + +LL ++DG +S +V +I TNR + LD A
Sbjct: 285 VFIDEIDAVGTKRYDANSG-GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPA 343
Query: 384 LLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELE 443
LLRPGR++ ++E LPD R +I QIHT+KM LA DVNL+E +SGA+++
Sbjct: 344 LLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMT----LAEDVNLEEFVMTKDEFSGADIK 399
Query: 444 GVAKSAVSFALNRQ 457
+ A AL +
Sbjct: 400 AICTEAGLLALRER 413
>UNIPROTKB|F1MEU3 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:DAAA02031678 EMBL:DAAA02031679 EMBL:DAAA02031680
EMBL:DAAA02031681 IPI:IPI00687055 Ensembl:ENSBTAT00000012179
Uniprot:F1MEU3
Length = 1248
Score = 387 (141.3 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 103/276 (37%), Positives = 146/276 (52%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS + ++P + K I+ +G L YGPPGTGKTL+AR + +
Sbjct: 292 IGGLSHHIHALKEMVVFPLLYP-EIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQ 350
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
+ K+ G + LSK+VGE+E+ +R LF DQ S +I FDEID +
Sbjct: 351 GDKKVAFFMRKGADCLSKWVGESERQLRLLF-----DQAYLMRPS---IIFFDEIDGLAP 402
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG+++ +++IG TNR D +D AL RPGR + +
Sbjct: 403 VRSSRQDQ--IHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 460
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+LPD+ R ILQIHT N L+ D L ELA + Y GA+++ + A AL R
Sbjct: 461 NLPDQKARKHILQIHTRDW--NPKLS-DAFLGELAEKCVGYCGADIKALCTEAALIALRR 517
Query: 457 ---QLSMDDLTKPVDEESIKVTMDDFLHALYEIVPA 489
Q+ +D SI + DF HA+ IVPA
Sbjct: 518 RYPQIYASSHKLQLDVSSIVLNAQDFYHAMQNIVPA 553
Score = 41 (19.5 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 538 LLEGPSGSGKTALAATAGIDSDFPF-VKIISAESMIGLHEST---KCAQIVK 585
LL G GSG+T+ A A + + F V + ++ + T CAQI +
Sbjct: 661 LLSGERGSGQTSHLAPALLHTLEKFSVHRLDLPALYSVSAKTPEESCAQIFR 712
>UNIPROTKB|J9NU31 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:AAEX03010776 EMBL:AAEX03010777 EMBL:AAEX03010778
Ensembl:ENSCAFT00000043993 Uniprot:J9NU31
Length = 1291
Score = 387 (141.3 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 103/276 (37%), Positives = 146/276 (52%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS + ++P + K I+ +G L YGPPGTGKTL+AR + +
Sbjct: 240 IGGLSHHIHALKEMVVFPLLYP-EIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQ 298
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
+ K+ G + LSK+VGE+E+ +R LF DQ S +I FDEID +
Sbjct: 299 GDKKVAFFMRKGADCLSKWVGESERQLRLLF-----DQAYLMRPS---IIFFDEIDGLAP 350
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG+++ +++IG TNR D +D AL RPGR + +
Sbjct: 351 VRSSRQDQ--IHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 408
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+LPD+ R ILQIHT N L+ D L ELA + Y GA+++ + A AL R
Sbjct: 409 NLPDQKARKHILQIHTRDW--NPKLS-DAFLGELAEKCVGYCGADIKALCTEAALIALRR 465
Query: 457 ---QLSMDDLTKPVDEESIKVTMDDFLHALYEIVPA 489
Q+ +D SI + DF HA+ IVPA
Sbjct: 466 RYPQIYASSHKLQLDVSSIVLNAQDFYHAMQNIVPA 501
Score = 41 (19.5 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 538 LLEGPSGSGKTALAATAGIDSDFPF-VKIISAESMIGLHEST---KCAQIVK 585
LL G GSG+T+ A A + + F V + ++ + T CAQI +
Sbjct: 608 LLSGERGSGQTSHLAPALLHTLEKFSVHRLDLPALYSVSAKTPEESCAQIFR 659
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 352 (129.0 bits), Expect = 2.5e-31, P = 2.5e-31
Identities = 90/254 (35%), Positives = 144/254 (56%)
Query: 220 GIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLN 279
GIGGL+ + ++ R + P + ++GIK KG+LLYGPPGTGKTL+AR + +
Sbjct: 138 GIGGLNDQIREL-REVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSME 196
Query: 280 GMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG 339
K+V+ ++ K++GE+ + IR++F A+ + +I DEIDAI R
Sbjct: 197 TNFLKVVSSA-IVDKYIGESARLIREMFGYAKEHEPC--------IIFMDEIDAIGGRRF 247
Query: 340 STRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
S +GT I + +LL ++DG + L +I TNR D LD ALLR GRL+ ++EI
Sbjct: 248 S--EGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEI 305
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN- 455
LP+E GRL+IL+IH++ ++ + D++ + + + +GA+L V A FA+
Sbjct: 306 PLPNEVGRLEILKIHSSTVQ----MEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKD 361
Query: 456 -RQ-LSMDDLTKPV 467
R ++ DD + V
Sbjct: 362 YRDAINQDDFNRAV 375
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 352 (129.0 bits), Expect = 2.5e-31, P = 2.5e-31
Identities = 89/237 (37%), Positives = 128/237 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + D+ A + K+GIK KG+L++GPPGTGKTL+AR N
Sbjct: 188 IGGLDKQIEDLVE-AIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNA 246
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD F A+ +I DE+DAI R
Sbjct: 247 TFLKLA-GPQLVQMFIGDGAKMVRDAFNLAKEKAPA--------IIFIDELDAIGTKRFD 297
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S G + +LL ++DG + + V +I TNR D LD ALLR GRL+ ++E+ P
Sbjct: 298 SELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHP 357
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+E R +ILQIH+ KM + DVN +ELA T +++GA+L+ V A AL R
Sbjct: 358 NEESRARILQIHSRKMNVHK----DVNFEELARSTDDFNGAQLKAVCVEAGMIALRR 410
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 352 (129.0 bits), Expect = 2.5e-31, P = 2.5e-31
Identities = 89/237 (37%), Positives = 128/237 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + D+ A + K+GIK KG+L++GPPGTGKTL+AR N
Sbjct: 188 IGGLDKQIEDLVE-AIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNA 246
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD F A+ +I DE+DAI R
Sbjct: 247 TFLKLA-GPQLVQMFIGDGAKMVRDAFNLAKEKAPA--------IIFIDELDAIGTKRFD 297
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S G + +LL ++DG + + V +I TNR D LD ALLR GRL+ ++E+ P
Sbjct: 298 SELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHP 357
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+E R +ILQIH+ KM + DVN +ELA T +++GA+L+ V A AL R
Sbjct: 358 NEESRARILQIHSRKMNVHK----DVNFEELARSTDDFNGAQLKAVCVEAGMIALRR 410
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 91/257 (35%), Positives = 139/257 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ A + LGI+ KG+L+YGPPGTGKTL+AR
Sbjct: 134 IGGLDKQIQELVE-AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 192
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ + +I DE+DAI R
Sbjct: 193 TFLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKAPS--------IIFIDELDAIGTKRFD 243
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG + V +I TNR D+LD ALLR GRL+ ++E +P
Sbjct: 244 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 303
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR--- 456
+E R +I+QIH+ KM ++PDVN +ELA T +++GA+ + V A AL R
Sbjct: 304 NEEARARIMQIHSRKMN----VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 359
Query: 457 QLSMDDLTKPVDEESIK 473
+L+ +D + + E K
Sbjct: 360 ELTHEDYMEGILEVQAK 376
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 93/270 (34%), Positives = 147/270 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + + P ++GIK KG++LYGPPGTGKTL+A+ + +
Sbjct: 186 IGGLDNQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 244
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++V G E++ K++G+ K +R+LF AE + ++ DEIDAI R
Sbjct: 245 TFLRVV-GSELIQKYLGDGPKLVRELFRVAEEHAPS--------IVFIDEIDAIGTKRYD 295
Query: 341 TRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
+ G G + + +LL ++DG +S +V +I TNR + LD AL+RPGR++ ++E L
Sbjct: 296 SNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 354
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
PDE + +I QIHT++M LA DV L EL + SGA+++ + A AL R+
Sbjct: 355 PDEKTKKRIFQIHTSRMT----LADDVTLDELIMAKDDLSGADIKAICTEAGLMAL-RER 409
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
M V E K + ++ L+ E P
Sbjct: 410 RMK-----VTNEDFKKSKENVLYKKQEGTP 434
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 93/270 (34%), Positives = 147/270 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + + P ++GIK KG++LYGPPGTGKTL+A+ + +
Sbjct: 185 IGGLDNQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 243
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++V G E++ K++G+ K +R+LF AE + ++ DEIDAI R
Sbjct: 244 TFLRVV-GSELIQKYLGDGPKLVRELFRVAEEHAPS--------IVFIDEIDAIGTKRYD 294
Query: 341 TRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
+ G G + + +LL ++DG +S +V +I TNR + LD AL+RPGR++ ++E L
Sbjct: 295 SNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 353
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
PDE + +I QIHT++M LA DV L EL + SGA+++ + A AL R+
Sbjct: 354 PDEKTKKRIFQIHTSRMT----LADDVTLDELIMAKDDLSGADIKAICTEAGLMAL-RER 408
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
M V E K + ++ L+ E P
Sbjct: 409 RMK-----VTNEDFKKSKENVLYKKQEGTP 433
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 91/257 (35%), Positives = 139/257 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ A + LGI+ KG+L+YGPPGTGKTL+AR
Sbjct: 138 IGGLDKQIQELVE-AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 196
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ + +I DE+DAI R
Sbjct: 197 TFLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKAPS--------IIFIDELDAIGTKRFD 247
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG + V +I TNR D+LD ALLR GRL+ ++E +P
Sbjct: 248 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 307
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR--- 456
+E R +I+QIH+ KM ++PDVN +ELA T +++GA+ + V A AL R
Sbjct: 308 NEEARARIMQIHSRKMN----VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 363
Query: 457 QLSMDDLTKPVDEESIK 473
+L+ +D + + E K
Sbjct: 364 ELTHEDYMEGILEVQAK 380
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 91/257 (35%), Positives = 139/257 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ A + LGI+ KG+L+YGPPGTGKTL+AR
Sbjct: 188 IGGLDKQIQELVE-AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 246
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ + +I DE+DAI R
Sbjct: 247 TFLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKAPS--------IIFIDELDAIGTKRFD 297
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG + V +I TNR D+LD ALLR GRL+ ++E +P
Sbjct: 298 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 357
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR--- 456
+E R +I+QIH+ KM ++PDVN +ELA T +++GA+ + V A AL R
Sbjct: 358 NEEARARIMQIHSRKMN----VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 413
Query: 457 QLSMDDLTKPVDEESIK 473
+L+ +D + + E K
Sbjct: 414 ELTHEDYMEGILEVQAK 430
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 91/257 (35%), Positives = 139/257 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ A + LGI+ KG+L+YGPPGTGKTL+AR
Sbjct: 146 IGGLDKQIQELVE-AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 204
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ + +I DE+DAI R
Sbjct: 205 TFLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKAPS--------IIFIDELDAIGTKRFD 255
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG + V +I TNR D+LD ALLR GRL+ ++E +P
Sbjct: 256 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 315
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR--- 456
+E R +I+QIH+ KM ++PDVN +ELA T +++GA+ + V A AL R
Sbjct: 316 NEEARARIMQIHSRKMN----VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 371
Query: 457 QLSMDDLTKPVDEESIK 473
+L+ +D + + E K
Sbjct: 372 ELTHEDYMEGILEVQAK 388
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 91/257 (35%), Positives = 139/257 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ A + LGI+ KG+L+YGPPGTGKTL+AR
Sbjct: 188 IGGLDKQIQELVE-AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 246
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ + +I DE+DAI R
Sbjct: 247 TFLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKAPS--------IIFIDELDAIGTKRFD 297
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG + V +I TNR D+LD ALLR GRL+ ++E +P
Sbjct: 298 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 357
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR--- 456
+E R +I+QIH+ KM ++PDVN +ELA T +++GA+ + V A AL R
Sbjct: 358 NEEARARIMQIHSRKMN----VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 413
Query: 457 QLSMDDLTKPVDEESIK 473
+L+ +D + + E K
Sbjct: 414 ELTHEDYMEGILEVQAK 430
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 91/257 (35%), Positives = 139/257 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ A + LGI+ KG+L+YGPPGTGKTL+AR
Sbjct: 195 IGGLDKQIQELVE-AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 253
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ + +I DE+DAI R
Sbjct: 254 TFLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKAPS--------IIFIDELDAIGTKRFD 304
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG + V +I TNR D+LD ALLR GRL+ ++E +P
Sbjct: 305 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 364
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR--- 456
+E R +I+QIH+ KM ++PDVN +ELA T +++GA+ + V A AL R
Sbjct: 365 NEEARARIMQIHSRKMN----VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 420
Query: 457 QLSMDDLTKPVDEESIK 473
+L+ +D + + E K
Sbjct: 421 ELTHEDYMEGILEVQAK 437
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 91/257 (35%), Positives = 139/257 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ A + LGI+ KG+L+YGPPGTGKTL+AR
Sbjct: 191 IGGLDKQIQELVE-AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 249
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ + +I DE+DAI R
Sbjct: 250 TFLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKAPS--------IIFIDELDAIGTKRFD 300
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG + V +I TNR D+LD ALLR GRL+ ++E +P
Sbjct: 301 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 360
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR--- 456
+E R +I+QIH+ KM ++PDVN +ELA T +++GA+ + V A AL R
Sbjct: 361 NEEARARIMQIHSRKMN----VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 416
Query: 457 QLSMDDLTKPVDEESIK 473
+L+ +D + + E K
Sbjct: 417 ELTHEDYMEGILEVQAK 433
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 91/257 (35%), Positives = 139/257 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ A + LGI+ KG+L+YGPPGTGKTL+AR
Sbjct: 188 IGGLDKQIQELVE-AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 246
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ + +I DE+DAI R
Sbjct: 247 TFLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKAPS--------IIFIDELDAIGTKRFD 297
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG + V +I TNR D+LD ALLR GRL+ ++E +P
Sbjct: 298 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 357
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR--- 456
+E R +I+QIH+ KM ++PDVN +ELA T +++GA+ + V A AL R
Sbjct: 358 NEEARARIMQIHSRKMN----VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 413
Query: 457 QLSMDDLTKPVDEESIK 473
+L+ +D + + E K
Sbjct: 414 ELTHEDYMEGILEVQAK 430
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 91/257 (35%), Positives = 139/257 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ A + LGI+ KG+L+YGPPGTGKTL+AR
Sbjct: 191 IGGLDKQIQELVE-AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 249
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ + +I DE+DAI R
Sbjct: 250 TFLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKAPS--------IIFIDELDAIGTKRFD 300
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG + V +I TNR D+LD ALLR GRL+ ++E +P
Sbjct: 301 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 360
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR--- 456
+E R +I+QIH+ KM ++PDVN +ELA T +++GA+ + V A AL R
Sbjct: 361 NEEARARIMQIHSRKMN----VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 416
Query: 457 QLSMDDLTKPVDEESIK 473
+L+ +D + + E K
Sbjct: 417 ELTHEDYMEGILEVQAK 433
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 93/263 (35%), Positives = 147/263 (55%)
Query: 207 NIFRHKEFNLQSLG-IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGT 265
++ + ++ L+S IGGL A+ +I + A + P + +GIK KG++LYG PGT
Sbjct: 175 SVMKVEKAPLESYADIGGLEAQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGEPGT 233
Query: 266 GKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHV 325
GKTL+A+ + + ++V G E++ K++G+ K +R+LF R D S +
Sbjct: 234 GKTLLAKAVANSTSATFLRVV-GSELIQKYLGDGPKLVRELF-------RVADDLSP-SI 284
Query: 326 IIFDEIDAICKSRGSTRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEA 383
+ DEIDA+ R G G + + +LL ++DG +S +V +I TNR + LD A
Sbjct: 285 VFIDEIDAVGTKRYDAHSG-GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPA 343
Query: 384 LLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELE 443
LLRPGR++ ++E LPD R +I QIHT+KM L+ DVNL+E +SGA+++
Sbjct: 344 LLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMT----LSEDVNLEEFVMTKDEFSGADIK 399
Query: 444 GVAKSAVSFALNRQLSMDDLTKP 466
+ A AL R+ M +T P
Sbjct: 400 AICTEAGLLAL-RERRMK-VTHP 420
>UNIPROTKB|Q9ULI0 [details] [associations]
symbol:ATAD2B "ATPase family AAA domain-containing protein
2B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
HOVERGEN:HBG080873 HOGENOM:HOG000034119 EMBL:AC009242 EMBL:AC066692
EMBL:AC079924 EMBL:AK094821 EMBL:AK131301 EMBL:AB033066
IPI:IPI00456004 IPI:IPI00739581 RefSeq:NP_001229267.1
RefSeq:NP_060022.1 UniGene:Hs.467862 PDB:2DKW PDB:3LXJ PDBsum:2DKW
PDBsum:3LXJ ProteinModelPortal:Q9ULI0 SMR:Q9ULI0 PhosphoSite:Q9ULI0
DMDM:296439432 PaxDb:Q9ULI0 PRIDE:Q9ULI0 Ensembl:ENST00000238789
GeneID:54454 KEGG:hsa:54454 UCSC:uc002rei.4 UCSC:uc002rek.4
CTD:54454 GeneCards:GC02M023971 HGNC:HGNC:29230 HPA:HPA034555
neXtProt:NX_Q9ULI0 PharmGKB:PA162377039 InParanoid:Q9ULI0
OMA:NAQDFYH OrthoDB:EOG49KFQ1 EvolutionaryTrace:Q9ULI0
GenomeRNAi:54454 NextBio:56685 ArrayExpress:Q9ULI0 Bgee:Q9ULI0
CleanEx:HS_ATAD2B Genevestigator:Q9ULI0 GermOnline:ENSG00000119778
GO:GO:0070577 InterPro:IPR018359 Uniprot:Q9ULI0
Length = 1458
Score = 388 (141.6 bits), Expect = 3.5e-31, Sum P(2) = 3.5e-31
Identities = 103/276 (37%), Positives = 147/276 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS + ++P + K I+ +G L YGPPGTGKTL+AR + +
Sbjct: 402 IGGLSHHIHALKEMVVFPLLYP-EIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQ 460
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
+ K+ G + LSK+VGE+E+ +R LF DQ S +I FDEID +
Sbjct: 461 GDKKVAFFMRKGADCLSKWVGESERQLRLLF-----DQAYLMRPS---IIFFDEIDGLAP 512
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG+++ +++IG TNR D +D AL RPGR + +
Sbjct: 513 VRSSRQDQ--IHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 570
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+LPD+ R ILQIHT N L+ D L ELA + Y GA+++ + A AL R
Sbjct: 571 NLPDQKARKHILQIHTRDW--NPKLS-DAFLGELAEKCVGYCGADIKALCTEAALIALRR 627
Query: 457 ---QLSMDDLTKPVDEESIKVTMDDFLHALYEIVPA 489
Q+ +D SI ++ DF HA+ IVPA
Sbjct: 628 RYPQIYASSHKLQLDVSSIVLSAQDFYHAMQNIVPA 663
Score = 40 (19.1 bits), Expect = 3.5e-31, Sum P(2) = 3.5e-31
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 538 LLEGPSGSGKTALAATAGIDSDFPF-VKIISAESMIGLHEST---KCAQIVK 585
LL G GSG+T+ A A + + F V + ++ + T CAQI +
Sbjct: 770 LLSGERGSGQTSHLAPALLHTLERFSVHRLDLPALYSVSAKTPEESCAQIFR 821
>UNIPROTKB|F1P871 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:AAEX03010776 EMBL:AAEX03010777
EMBL:AAEX03010778 Ensembl:ENSCAFT00000006311 Uniprot:F1P871
Length = 1464
Score = 387 (141.3 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 103/276 (37%), Positives = 146/276 (52%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS + ++P + K I+ +G L YGPPGTGKTL+AR + +
Sbjct: 405 IGGLSHHIHALKEMVVFPLLYP-EIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQ 463
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
+ K+ G + LSK+VGE+E+ +R LF DQ S +I FDEID +
Sbjct: 464 GDKKVAFFMRKGADCLSKWVGESERQLRLLF-----DQAYLMRPS---IIFFDEIDGLAP 515
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG+++ +++IG TNR D +D AL RPGR + +
Sbjct: 516 VRSSRQDQ--IHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 573
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+LPD+ R ILQIHT N L+ D L ELA + Y GA+++ + A AL R
Sbjct: 574 NLPDQKARKHILQIHTRDW--NPKLS-DAFLGELAEKCVGYCGADIKALCTEAALIALRR 630
Query: 457 ---QLSMDDLTKPVDEESIKVTMDDFLHALYEIVPA 489
Q+ +D SI + DF HA+ IVPA
Sbjct: 631 RYPQIYASSHKLQLDVSSIVLNAQDFYHAMQNIVPA 666
Score = 41 (19.5 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 538 LLEGPSGSGKTALAATAGIDSDFPF-VKIISAESMIGLHEST---KCAQIVK 585
LL G GSG+T+ A A + + F V + ++ + T CAQI +
Sbjct: 774 LLSGERGSGQTSHLAPALLHTLEKFSVHRLDLPALYSVSAKTPEESCAQIFR 825
>UNIPROTKB|F1MEY1 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:DAAA02031678 EMBL:DAAA02031679
EMBL:DAAA02031680 EMBL:DAAA02031681 IPI:IPI01003034
Ensembl:ENSBTAT00000022935 Uniprot:F1MEY1
Length = 1465
Score = 387 (141.3 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 103/276 (37%), Positives = 146/276 (52%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS + ++P + K I+ +G L YGPPGTGKTL+AR + +
Sbjct: 407 IGGLSHHIHALKEMVVFPLLYP-EIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQ 465
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
+ K+ G + LSK+VGE+E+ +R LF DQ S +I FDEID +
Sbjct: 466 GDKKVAFFMRKGADCLSKWVGESERQLRLLF-----DQAYLMRPS---IIFFDEIDGLAP 517
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG+++ +++IG TNR D +D AL RPGR + +
Sbjct: 518 VRSSRQDQ--IHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 575
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+LPD+ R ILQIHT N L+ D L ELA + Y GA+++ + A AL R
Sbjct: 576 NLPDQKARKHILQIHTRDW--NPKLS-DAFLGELAEKCVGYCGADIKALCTEAALIALRR 632
Query: 457 ---QLSMDDLTKPVDEESIKVTMDDFLHALYEIVPA 489
Q+ +D SI + DF HA+ IVPA
Sbjct: 633 RYPQIYASSHKLQLDVSSIVLNAQDFYHAMQNIVPA 668
Score = 41 (19.5 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 538 LLEGPSGSGKTALAATAGIDSDFPF-VKIISAESMIGLHEST---KCAQIVK 585
LL G GSG+T+ A A + + F V + ++ + T CAQI +
Sbjct: 775 LLSGERGSGQTSHLAPALLHTLEKFSVHRLDLPALYSVSAKTPEESCAQIFR 826
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 375 (137.1 bits), Expect = 3.7e-31, P = 3.7e-31
Identities = 91/250 (36%), Positives = 149/250 (59%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P + S LG++ G+LL+GPPGTGKTL+A+ + + + V GPE+++ +VG++E+N
Sbjct: 728 PELLS-LGLRR-SGLLLHGPPGTGKTLLAKAVATECS-LTFLSVKGPELINMYVGQSEEN 784
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R++FA R R +I FDE+D++ SRG D GV D +V+QLL ++DG+
Sbjct: 785 VREVFA------RARAAAPC--IIFFDELDSLAPSRGRNGDSGGVMDRVVSQLLAELDGL 836
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENG-RLQILQIHTNKMKENSFL 421
S +V +IG TNR D+LD ALLRPGR + V + + ++ +L++L T K K L
Sbjct: 837 HSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVSEDRASQLRVLSAITRKFK----L 892
Query: 422 APDVNLQELAARTK-NYSGAELEGVAKSAVSFALNRQL-SMDDLTKPVDEESIKVTMDDF 479
P V+L + R +GA+L + A++ AL R++ +++ +P ++ +TMDD
Sbjct: 893 EPSVSLVNVLDRCPPQLTGADLYSLCSDAMTTALKRRVRDLEEGLEP-GSSTLLLTMDDL 951
Query: 480 LHALYEIVPA 489
L A + P+
Sbjct: 952 LQAAARLQPS 961
Score = 135 (52.6 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 88/351 (25%), Positives = 144/351 (41%)
Query: 257 MLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRT 316
+LL GPPG+GKT L G+ V + + G EK ++ F+ A +R
Sbjct: 466 VLLRGPPGSGKTTAVTAACSRL-GLHLLKVPCSSLCADSSGAVEKKLQATFSRA---RRC 521
Query: 317 RGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGM 373
R V++ +D + G RDG G +V LL D + S ++++
Sbjct: 522 RPV-----VLLLTAVDLL----GRNRDGLGEDARVVATLCHLLQDEDPLTSCPPLMVVAT 572
Query: 374 TNR-KDM-LDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELA 431
T++ +D+ D P LEV V +S E RL +LQ T + L +VNL +LA
Sbjct: 573 TSQAQDLPADVQTAFPHELEVPV-LS---EGQRLSVLQALTAHLP----LGQEVNLTQLA 624
Query: 432 ARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEES--------IKVTMDDFLHAL 483
R + +L + + A R + L + EE + +DF AL
Sbjct: 625 RRCAGFVVGDLYALLTHSSRVACTR-IKNSGLAGGLSEEDEGELCAAGFPLLAEDFGQAL 683
Query: 484 YEIVPAFGASTDDLERSRLNGMVDCG---DRHKHIYQRAMLLVEQVKV-SKGSPLVTCLL 539
++ A + + ++ D G + K I + L +E ++ S G LL
Sbjct: 684 EQLQTAHSQAIGAPKIPSVSWH-DVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLL 742
Query: 540 EGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDA 590
GP G+GKT LA + F+ + E +I ++ + +VF A
Sbjct: 743 HGPPGTGKTLLAKAVATECSLTFLSVKGPE-LINMYVGQSEENVREVFARA 792
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 379 (138.5 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 101/269 (37%), Positives = 152/269 (56%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P +GI G+L+YGPPG GKTL+A+ I V GPE+L+K+VGE+E+
Sbjct: 589 PKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFIS-VKGPELLNKYVGESERA 647
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTG--VHDSIVNQLLTKID 360
+R +F QR S VI FDE DA+ RG DG G + +VNQLLT++D
Sbjct: 648 VRQVF------QRAAA--SSPCVIFFDEFDALAPKRGGG-DGGGNQATERVVNQLLTEMD 698
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
G+E + V +I TNR D++D A+ RPGRL+ V + LP R +IL+ T+K+
Sbjct: 699 GLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIP---- 754
Query: 421 LAPDVNLQELAA--RTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDD 478
+ DV+L ++ R ++SGA+L + K A + A++R ++ T+P D VTM+D
Sbjct: 755 IHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISRGFD-NNSTEP-DT----VTMED 808
Query: 479 FLHALYEIVPAFGASTDDLERSRLNGMVD 507
F+ AL +I P+ D+L +LN ++
Sbjct: 809 FIFALSKIKPSVSRK-DELMYDKLNNDIN 836
Score = 168 (64.2 bits), Expect = 7.0e-22, Sum P(3) = 7.0e-22
Identities = 74/285 (25%), Positives = 121/285 (42%)
Query: 86 STGDHVSL-NRFIPPEDFNLALLTVELEFVKKGSKNEQVDAVLLANQLRKRFINQVMTAG 144
S GD V + + +PP N+ + ++ K+ KN R R N
Sbjct: 88 SDGDDVEIISPPLPPPSSNILNEQLTSQY-KQNIKNTPPTTTTTTPAKRNRDENIPSNVN 146
Query: 145 QRVVFEYHGN--NYIFTVNGAAVEGQEKSNALERGIITNETYFVFEASNDSGIKIVNQRE 202
+ N N T N + L+ N VF+ SN++ N+
Sbjct: 147 SNNNNNNNNNAINSNTTTNNVNTPNSKPKKKLKNSSNGNN---VFQFSNNNNNNGNNKDN 203
Query: 203 GANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGP 262
++ + F+ +GG+ + DI R + P + S LG++ +G+LL+GP
Sbjct: 204 NLSNGLIPTINFS----NLGGVESCLRDI-REHIEYPICHPEIYSHLGVEPPRGILLHGP 258
Query: 263 PGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSD 322
G GKTL+A+ I L + ++ E+ S GE+E +R LF++A Q+
Sbjct: 259 SGCGKTLLAKAIAGELK-VPLFAISATEITSGVSGESEARVRTLFSNAIA-------QAP 310
Query: 323 LHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNN 367
+I DEIDAI R S + IV+QLLT +D + L++
Sbjct: 311 C-IIFIDEIDAIAPKRESA--SKDMERRIVSQLLTCMDSLNYLSS 352
Score = 149 (57.5 bits), Expect = 7.0e-22, Sum P(3) = 7.0e-22
Identities = 33/91 (36%), Positives = 58/91 (63%)
Query: 367 NVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMK-ENSFLAPDV 425
+V++IG TNR + LD AL GR + ++ + +PD+ R +IL++ T+KM+ EN+F
Sbjct: 402 HVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNF----- 456
Query: 426 NLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+ +E+A T Y GA++ + K A + ++NR
Sbjct: 457 DYEEIATLTPGYVGADINLLVKEAATNSVNR 487
Score = 73 (30.8 bits), Expect = 7.0e-22, Sum P(3) = 7.0e-22
Identities = 41/171 (23%), Positives = 75/171 (43%)
Query: 434 TKNYSGAELEGVAKSAVSFALNR-QLSMDDLT--KPVDEE---SIKVTMDDFLHALYEIV 487
T N +GA + S+ + +N LS + L +P++ E S+ + M DF AL ++V
Sbjct: 490 TSNLNGASSSSSSSSSSTTNINNIGLSTELLISKEPLEPEKLNSLYIEMIDFKKALKKVV 549
Query: 488 PAF---GAST-DDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVK-VSKGSPLVTCLLEGP 542
PA G +T ++ + + + + R + ++ K + SP L+ GP
Sbjct: 550 PAAKREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSP-AGVLMYGP 608
Query: 543 SGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKS 593
G GKT LA + F+ + E ++ + + +VF+ A S
Sbjct: 609 PGCGKTLLAKAIASECQANFISVKGPE-LLNKYVGESERAVRQVFQRAAAS 658
Score = 43 (20.2 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 521 LLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDS 558
LLV++ + + + T L G S S ++ ++T I++
Sbjct: 475 LLVKEAATNSVNRIFTSNLNGASSSSSSSSSSTTNINN 512
Score = 41 (19.5 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 170 KSNALERGIITNETYFVFEASNDSGIKIVNQR-EGANSNIFRH 211
+SN L ITNE V+ N +K Q E A + I ++
Sbjct: 27 ESNILNNDFITNELRKVYPEYNRKPLKGFKQLVEKAMNQIIKN 69
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 350 (128.3 bits), Expect = 4.1e-31, P = 4.1e-31
Identities = 91/242 (37%), Positives = 132/242 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + P + LGI KG+LLYGPPGTGKTL+AR + +
Sbjct: 134 IGGLDQQIKEI-KEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 192
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V+G E++ K++GE + +R+LF A + +I DEID+I GS
Sbjct: 193 RFIR-VSGSELVQKYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSI----GS 239
Query: 341 TR-DGTGVHDSIVN----QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVE 395
+R D G DS V +LL ++DG E N+ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 240 SRIDSAGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIE 299
Query: 396 ISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN 455
P R IL+IH+ M L +NL ++A + SGAEL+GV A +AL
Sbjct: 300 FPPPSVEARADILRIHSRSMN----LTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALR 355
Query: 456 RQ 457
+
Sbjct: 356 ER 357
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 350 (128.3 bits), Expect = 4.1e-31, P = 4.1e-31
Identities = 87/255 (34%), Positives = 143/255 (56%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + + P ++GIK KG++LYGPPGTGKTL+A+ + +
Sbjct: 186 IGGLDTQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 244
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++V G E++ K++G+ K +R+LF AE + ++ DEIDA+ R
Sbjct: 245 TFLRVV-GSELIQKYLGDGPKLVRELFRVAEEHAPS--------IVFIDEIDAVGTKRYD 295
Query: 341 TRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
+ G G + + +LL ++DG +S +V +I TNR + LD AL+RPGR++ ++E L
Sbjct: 296 SNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 354
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-RQ 457
PDE + +I IHT++M LA DVNL EL + SGA+++ + A AL R+
Sbjct: 355 PDEKTKRRIFTIHTSRMT----LAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERR 410
Query: 458 LSMDDLTKPVDEESI 472
+ + + +ES+
Sbjct: 411 MKVTNEDFKKSKESV 425
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 350 (128.3 bits), Expect = 4.1e-31, P = 4.1e-31
Identities = 87/268 (32%), Positives = 150/268 (55%)
Query: 207 NIFRHKEFNLQSLG-IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGT 265
++ + ++ L+S IGGL ++ +I + A + P + +GIK KG++LYGPPGT
Sbjct: 180 SVMKVEKAPLESYADIGGLESQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGPPGT 238
Query: 266 GKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHV 325
GKTL+A+ + + ++V G E++ K++G+ K +R++F AE + +
Sbjct: 239 GKTLLAKAVANETSATFLRVV-GSELIQKYLGDGPKLVREMFKVAEEHAPS--------I 289
Query: 326 IIFDEIDAICKSR-GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEAL 384
+ DEIDA+ R +T G + +LL ++DG +S +V +I TNR D LD AL
Sbjct: 290 VFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPAL 349
Query: 385 LRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEG 444
+RPGR++ ++++ PD + +I QIHT+KM ++PDV+L+E SGA+++
Sbjct: 350 IRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMT----MSPDVDLEEFVMSKDELSGADIKA 405
Query: 445 VAKSAVSFALNRQ---LSMDDLTKPVDE 469
+ A AL + ++ DL K D+
Sbjct: 406 ICTEAGLLALRERRMKITQADLRKARDK 433
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 350 (128.3 bits), Expect = 4.1e-31, P = 4.1e-31
Identities = 90/257 (35%), Positives = 139/257 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ A + LGI+ KG+L+YGPPGTGKTL+AR
Sbjct: 153 IGGLDKQIQELVE-AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 211
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD F+ A+ + +I DE+DAI R
Sbjct: 212 TFLKLA-GPQLVQMFIGDGAKLVRDAFSLAKEKAPS--------IIFIDELDAIGNKRFD 262
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG + V +I TNR D+LD ALLR GRL+ ++E +P
Sbjct: 263 SEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 322
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR--- 456
+E R +I+QIH+ KM ++PDVN +ELA T +++GA+ + V A AL R
Sbjct: 323 NEEARARIMQIHSRKMN----VSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGAT 378
Query: 457 QLSMDDLTKPVDEESIK 473
+L+ +D + + E K
Sbjct: 379 ELTHEDYMEGILEVQAK 395
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 350 (128.3 bits), Expect = 4.1e-31, P = 4.1e-31
Identities = 87/268 (32%), Positives = 150/268 (55%)
Query: 207 NIFRHKEFNLQSLG-IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGT 265
++ + ++ L+S IGGL ++ +I + A + P + +GIK KG++LYGPPGT
Sbjct: 180 SVMKVEKAPLESYADIGGLESQIQEI-KEAVELPLTHPELYEDIGIKPPKGVILYGPPGT 238
Query: 266 GKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHV 325
GKTL+A+ + + ++V G E++ K++G+ K +R++F AE + +
Sbjct: 239 GKTLLAKAVANETSATFLRVV-GSELIQKYLGDGPKLVREMFKVAEEHAPS--------I 289
Query: 326 IIFDEIDAICKSR-GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEAL 384
+ DEIDA+ R +T G + +LL ++DG +S +V +I TNR D LD AL
Sbjct: 290 VFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPAL 349
Query: 385 LRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEG 444
+RPGR++ ++++ PD + +I QIHT+KM ++PDV+L+E SGA+++
Sbjct: 350 IRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMT----MSPDVDLEEFVMSKDELSGADIKA 405
Query: 445 VAKSAVSFALNRQ---LSMDDLTKPVDE 469
+ A AL + ++ DL K D+
Sbjct: 406 ICTEAGLLALRERRMKITQADLRKARDK 433
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 367 (134.2 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 91/250 (36%), Positives = 147/250 (58%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P + S LG++ G+LL+GPPGTGKTL+A+ + + + V GPE+++ +VG++E+N
Sbjct: 318 PELLS-LGLRR-SGLLLHGPPGTGKTLLAKAVATECS-LTFLSVKGPELINMYVGQSEEN 374
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R++FA R R +I FDE+D++ SRG + D GV D +V+QLL ++DG+
Sbjct: 375 VREVFA------RARAAAPC--IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGL 426
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL-PDENGRLQILQIHTNKMKENSFL 421
S +V +IG TNR D+LD ALLRPGR + V + D +L++L T K K L
Sbjct: 427 HSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFK----L 482
Query: 422 APDVNLQE-LAARTKNYSGAELEGVAKSAVSFALNRQL-SMDDLTKPVDEESIKVTMDDF 479
P V+L L +GA+L + A++ AL R++ +++ +P ++ +TM+D
Sbjct: 483 EPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGLEP-GSSALMLTMEDL 541
Query: 480 LHALYEIVPA 489
L A + P+
Sbjct: 542 LQAAARLQPS 551
Score = 129 (50.5 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 88/350 (25%), Positives = 142/350 (40%)
Query: 257 MLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRT 316
+LL GPPG GKT + L G+ V + + G E ++ +F+ A +R
Sbjct: 56 VLLRGPPGCGKTTVVAAACSQL-GLHLLKVPCSSLCADSSGAVETKLQAIFSRA---RRC 111
Query: 317 RGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIV---NQLLTKIDGVESLNNVLLIGM 373
R V++ +D + G RDG G +V LL D + S ++++
Sbjct: 112 RPA-----VLLLTAVDLL----GRDRDGLGEDARVVAALRHLLLDEDPLNSCPPLMVVAT 162
Query: 374 TNR-KDM-LDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELA 431
T+R +D+ D P LEV +S E RL IL+ T + L +VNL +LA
Sbjct: 163 TSRAQDLPADVQTAFPHELEVPA-LS---EGQRLSILRALTAHLP----LGQEVNLAQLA 214
Query: 432 ARTKNYSGAELEGVAKSAVSFALNR--QLSM-DDLTKPVDEE----SIKVTMDDFLHALY 484
R + +L + + A R L + LT+ + E + +DF AL
Sbjct: 215 RRCAGFVVGDLYALLTHSSRAACTRIKNLGLAGGLTEEDEGELCAAGFPLLAEDFGQAL- 273
Query: 485 EIVPAFGASTDDLERSRLNGMVDCG---DRHKHIYQRAMLLVEQVKV-SKGSPLVTCLLE 540
E+ + + D G + K I + L +E ++ S G LL
Sbjct: 274 ELQQTAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLLH 333
Query: 541 GPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDA 590
GP G+GKT LA + F+ + E +I ++ + +VF A
Sbjct: 334 GPPGTGKTLLAKAVATECSLTFLSVKGPE-LINMYVGQSEENVREVFARA 382
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 372 (136.0 bits), Expect = 4.9e-31, P = 4.9e-31
Identities = 99/279 (35%), Positives = 155/279 (55%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+Q IGG S E ++A + +LGIK +G+L++GPPG KT++A+ +
Sbjct: 531 NVQWSDIGGQS-ELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKAL 589
Query: 275 G--KMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEID 332
LN + + GPE+ S +VGE+E+ +R++F A Q ++ FDEID
Sbjct: 590 ATESKLNFLS---IKGPELFSMWVGESERAVREVFRKAR--------QVAPAIVFFDEID 638
Query: 333 AIC--KSRGS-TRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGR 389
AI +S G + G+ V + ++ QLLT++DGVE+L NV ++ TNR DM+D+ALLRPGR
Sbjct: 639 AIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGR 698
Query: 390 LEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSA 449
++ + + LP R +IL+I M ++ DV++++L T+ YSGAE++ V A
Sbjct: 699 IDRILYVGLPQCEARREILKIKLRAMP----ISNDVDMEKLVQLTEGYSGAEIQAVCHEA 754
Query: 450 VSFALNRQLSMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
AL + +D +K T DF HAL + P
Sbjct: 755 ALRALEQSFEAED---------VKWT--DFEHALKAVPP 782
Score = 169 (64.5 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 102/485 (21%), Positives = 204/485 (42%)
Query: 119 KNEQV-DAVLLANQLRKRFINQVMTAGQRVVFEYHGNNYIFTVNGAAVEGQEKSNALERG 177
K+ Q+ DA+ L L++ +N+V + + + F + +E L
Sbjct: 178 KSVQLQDAIAL---LKRDMVNRVFYKDSLIHMNFFNKSLTFRLERWQSTVEEALAGLS-- 232
Query: 178 IITNETYFVFEASNDSGIKIVNQREGANSNIFRHK-EFNLQSLGIGGLSAEFA---DIFR 233
+ + F+ + +N + + ++ + AN K + IGGL + +
Sbjct: 233 LDSKPLQFI-QVTNVTKLHLIT--DDANQQEEEQKISHRITKCQIGGLDRQLQLVEESME 289
Query: 234 RAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTL----MARQIGKMLNGMEPKI-VNG 288
A R P G++ +G+LLYG G GK++ M + G I +N
Sbjct: 290 YALGFRTLPA------GLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINS 343
Query: 289 PEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVH 348
EV SKF+GETE+ + +F A N +++ +++ +C + ++ V
Sbjct: 344 GEVYSKFLGETEQKLGAIFERAYNHY------PHPTLLLIEDVHNLCPKQENSDLVKRVS 397
Query: 349 DSIVNQLLTKIDGVESL--NNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQ 406
+ ++ LL ++ L + ++ +++ D L ++ R GRL+ +VE+ P RL+
Sbjct: 398 LAFLS-LLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLE 456
Query: 407 ILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKP 466
I++ ++ L+ D ++ +A+ T Y GA+L + +A+ A L M L
Sbjct: 457 IVRCLIKSVEHQ--LS-DEEVEHVASITHGYVGADLANLVYAAMLQAQPNPLQMPHLQAA 513
Query: 467 VDEESIKVTMDDFLHALYEIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQV 526
+ IK + A+ E++ +++ S + G + + + +L ++
Sbjct: 514 LTR--IKPS------AMREVL----IECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKF 561
Query: 527 KVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESM-IGLHESTKCAQIVK 585
+ P L+ GP G KT +A +S F+ I E + + ES + + +
Sbjct: 562 QRLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVR--E 619
Query: 586 VFEDA 590
VF A
Sbjct: 620 VFRKA 624
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 349 (127.9 bits), Expect = 5.2e-31, P = 5.2e-31
Identities = 91/259 (35%), Positives = 144/259 (55%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ IGGL + ++ R + P + ++GI KG LLYGPPGTGKTL+AR I
Sbjct: 138 NVNYAEIGGLGQQIREL-REVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAI 196
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
++ K+V+ ++ K++GE+ + IR++FA A + Q +I DEIDAI
Sbjct: 197 ASQMDANFLKVVSSA-IVDKYIGESARLIREMFAYARDHQPC--------IIFMDEIDAI 247
Query: 335 CKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLE 391
R S +GT I + +LL ++DG ++L V +I TNR D LD ALLRPGRL+
Sbjct: 248 GGRRFS--EGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLD 305
Query: 392 VQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVS 451
++EI LP+E R+ IL+IH + + +++ + + + ++GA+L + A
Sbjct: 306 RKLEIPLPNEVARMDILKIHAEPLNKRG----EIDYEAVVKLSDLFNGADLRNICTEAGL 361
Query: 452 FAL--NRQLSM-DDLTKPV 467
FAL +R+ + +D K V
Sbjct: 362 FALRCDREFVIQEDFMKAV 380
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 349 (127.9 bits), Expect = 5.2e-31, P = 5.2e-31
Identities = 91/257 (35%), Positives = 138/257 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ A + LGI+ KG+L+YGPPGTGKTL+AR
Sbjct: 176 IGGLDKQIQELVE-AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 234
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ + +I DE+DAI R
Sbjct: 235 TFLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKAPS--------IIFIDELDAIGTKRFD 285
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG + V +I TNR D+LD ALLR GRL+ ++E +P
Sbjct: 286 SEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 345
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR--- 456
+E R +I+QIH+ KM + PDVN +ELA T +++GA+ + V A AL R
Sbjct: 346 NEEARARIMQIHSRKMN----VCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 401
Query: 457 QLSMDDLTKPVDEESIK 473
+L+ +D + + E K
Sbjct: 402 ELNHEDYMEGILEVQAK 418
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 373 (136.4 bits), Expect = 5.6e-31, P = 5.6e-31
Identities = 116/405 (28%), Positives = 216/405 (53%)
Query: 114 VKKGSKNEQVDAVLLANQLR--KRFIN----QVMTA--GQRVVFEYHGNNYIFTVNGAAV 165
++ GS N++ + +L+ L+ +F+N + M GQ F + GA +
Sbjct: 531 IRMGSLNDEQRSEMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGANL 590
Query: 166 EGQEKSNALERGIITNETYFV--FEASN-DSGIKIVNQREGANSNIFRHKEFNLQSLGIG 222
++S + ++++ + V +AS D+ + + +E + R K+ N +LG
Sbjct: 591 YISQESETKKINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAP 650
Query: 223 GL-SAEFADI-----FRRAFASRVFPPHVTSKL---GIKHVKGMLLYGPPGTGKTLMARQ 273
+ + ++ D+ + + V P + L G++ G+LLYGPPGTGKTL+A+
Sbjct: 651 KVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKA 710
Query: 274 IGK--MLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEI 331
+ LN + V GPE+++ ++GE+EKN+RD+F A + + VI FDE+
Sbjct: 711 VATECSLNFLS---VKGPELINMYIGESEKNVRDIFEKARSARPC--------VIFFDEL 759
Query: 332 DAICKSRGSTRDGTGVHDSIVNQLLTKIDGV-ESLNNVLLIGMTNRKDMLDEALLRPGRL 390
D++ +RG++ D GV D +V+Q+L +IDG+ +S ++ +IG +NR D++D ALLRPGR
Sbjct: 760 DSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRF 819
Query: 391 EVQVEISL-PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKN-YSGAELEGVAKS 448
+ + + + D + R ++L+ T K K L+ DV+L +A + + ++GA++ +
Sbjct: 820 DKLLYVGVNADASYRERVLKALTRKFK----LSEDVSLYSVAKKCPSTFTGADMYALCAD 875
Query: 449 AVSFALNRQLSMDDL----TKPVDEESIKVTMDDFLHALYEIVPA 489
A A R++S D T+ D +S+ V DF+ A+ ++ P+
Sbjct: 876 AWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYVDFIKAMDQLSPS 920
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 348 (127.6 bits), Expect = 6.8e-31, P = 6.8e-31
Identities = 92/270 (34%), Positives = 147/270 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + + P ++GIK KG++LYGPPGTGKTL+A+ + +
Sbjct: 187 IGGLDNQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 245
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++V G E++ K++G+ K +R+LF AE + ++ DEIDAI R
Sbjct: 246 TFLRVV-GSELIQKYLGDGPKLVRELFRVAEEHAPS--------IVFIDEIDAIGTKRYD 296
Query: 341 TRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
+ G G + + +LL ++DG +S +V +I TNR + LD AL+RPGR++ ++E L
Sbjct: 297 SNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
PDE + +I QIHT++M LA DV L +L + SGA+++ + A AL R+
Sbjct: 356 PDEKTKKRIFQIHTSRMT----LADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL-RER 410
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
M V E K + ++ L+ E P
Sbjct: 411 RMK-----VTNEDFKKSKENVLYKKQEGTP 435
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 348 (127.6 bits), Expect = 6.8e-31, P = 6.8e-31
Identities = 92/270 (34%), Positives = 147/270 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + + P ++GIK KG++LYGPPGTGKTL+A+ + +
Sbjct: 187 IGGLDNQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 245
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++V G E++ K++G+ K +R+LF AE + ++ DEIDAI R
Sbjct: 246 TFLRVV-GSELIQKYLGDGPKLVRELFRVAEEHAPS--------IVFIDEIDAIGTKRYD 296
Query: 341 TRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
+ G G + + +LL ++DG +S +V +I TNR + LD AL+RPGR++ ++E L
Sbjct: 297 SNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
PDE + +I QIHT++M LA DV L +L + SGA+++ + A AL R+
Sbjct: 356 PDEKTKKRIFQIHTSRMT----LADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL-RER 410
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
M V E K + ++ L+ E P
Sbjct: 411 RMK-----VTNEDFKKSKENVLYKKQEGTP 435
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 348 (127.6 bits), Expect = 6.8e-31, P = 6.8e-31
Identities = 92/270 (34%), Positives = 147/270 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + + P ++GIK KG++LYGPPGTGKTL+A+ + +
Sbjct: 114 IGGLDNQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 172
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++V G E++ K++G+ K +R+LF AE + ++ DEIDAI R
Sbjct: 173 TFLRVV-GSELIQKYLGDGPKLVRELFRVAEEHAPS--------IVFIDEIDAIGTKRYD 223
Query: 341 TRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
+ G G + + +LL ++DG +S +V +I TNR + LD AL+RPGR++ ++E L
Sbjct: 224 SNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 282
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
PDE + +I QIHT++M LA DV L +L + SGA+++ + A AL R+
Sbjct: 283 PDEKTKKRIFQIHTSRMT----LADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL-RER 337
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
M V E K + ++ L+ E P
Sbjct: 338 RMK-----VTNEDFKKSKENVLYKKQEGTP 362
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 348 (127.6 bits), Expect = 6.8e-31, P = 6.8e-31
Identities = 92/270 (34%), Positives = 147/270 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + + P ++GIK KG++LYGPPGTGKTL+A+ + +
Sbjct: 187 IGGLDNQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 245
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++V G E++ K++G+ K +R+LF AE + ++ DEIDAI R
Sbjct: 246 TFLRVV-GSELIQKYLGDGPKLVRELFRVAEEHAPS--------IVFIDEIDAIGTKRYD 296
Query: 341 TRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
+ G G + + +LL ++DG +S +V +I TNR + LD AL+RPGR++ ++E L
Sbjct: 297 SNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
PDE + +I QIHT++M LA DV L +L + SGA+++ + A AL R+
Sbjct: 356 PDEKTKKRIFQIHTSRMT----LADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL-RER 410
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
M V E K + ++ L+ E P
Sbjct: 411 RMK-----VTNEDFKKSKENVLYKKQEGTP 435
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 348 (127.6 bits), Expect = 6.8e-31, P = 6.8e-31
Identities = 92/270 (34%), Positives = 147/270 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + + P ++GIK KG++LYGPPGTGKTL+A+ + +
Sbjct: 187 IGGLDNQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 245
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++V G E++ K++G+ K +R+LF AE + ++ DEIDAI R
Sbjct: 246 TFLRVV-GSELIQKYLGDGPKLVRELFRVAEEHAPS--------IVFIDEIDAIGTKRYD 296
Query: 341 TRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
+ G G + + +LL ++DG +S +V +I TNR + LD AL+RPGR++ ++E L
Sbjct: 297 SNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
PDE + +I QIHT++M LA DV L +L + SGA+++ + A AL R+
Sbjct: 356 PDEKTKKRIFQIHTSRMT----LADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL-RER 410
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
M V E K + ++ L+ E P
Sbjct: 411 RMK-----VTNEDFKKSKENVLYKKQEGTP 435
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 348 (127.6 bits), Expect = 6.8e-31, P = 6.8e-31
Identities = 92/270 (34%), Positives = 147/270 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + + P ++GIK KG++LYGPPGTGKTL+A+ + +
Sbjct: 187 IGGLDNQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 245
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++V G E++ K++G+ K +R+LF AE + ++ DEIDAI R
Sbjct: 246 TFLRVV-GSELIQKYLGDGPKLVRELFRVAEEHAPS--------IVFIDEIDAIGTKRYD 296
Query: 341 TRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
+ G G + + +LL ++DG +S +V +I TNR + LD AL+RPGR++ ++E L
Sbjct: 297 SNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
PDE + +I QIHT++M LA DV L +L + SGA+++ + A AL R+
Sbjct: 356 PDEKTKKRIFQIHTSRMT----LADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL-RER 410
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
M V E K + ++ L+ E P
Sbjct: 411 RMK-----VTNEDFKKSKENVLYKKQEGTP 435
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 348 (127.6 bits), Expect = 6.8e-31, P = 6.8e-31
Identities = 88/238 (36%), Positives = 135/238 (56%)
Query: 220 GIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLN 279
G+GGL+ + ++ R + P + ++GIK KG+LLYGPPGTGKTL+AR + L
Sbjct: 133 GVGGLNEQIREL-REVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLG 191
Query: 280 GMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG 339
K+V+ ++ K++GE+ + IR++F A+ + VI DEIDAI R
Sbjct: 192 VNFLKVVSSA-IVDKYIGESARIIREMFGYAKEHEPC--------VIFMDEIDAIGGRRF 242
Query: 340 STRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
S +GT I + +LL ++DG + L +I TNR D LD ALLRPGRL+ ++EI
Sbjct: 243 S--EGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEI 300
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFAL 454
LP+E GR++IL+IH K+ + +++ + L T +GA+L V A A+
Sbjct: 301 PLPNEVGRMEILKIHLEKVSKQG----EIDYEALVKLTDGTNGADLRNVVTEAGFIAI 354
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 348 (127.6 bits), Expect = 6.8e-31, P = 6.8e-31
Identities = 92/270 (34%), Positives = 147/270 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + + P ++GIK KG++LYGPPGTGKTL+A+ + +
Sbjct: 187 IGGLDNQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 245
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++V G E++ K++G+ K +R+LF AE + ++ DEIDAI R
Sbjct: 246 TFLRVV-GSELIQKYLGDGPKLVRELFRVAEEHAPS--------IVFIDEIDAIGTKRYD 296
Query: 341 TRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
+ G G + + +LL ++DG +S +V +I TNR + LD AL+RPGR++ ++E L
Sbjct: 297 SNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
PDE + +I QIHT++M LA DV L +L + SGA+++ + A AL R+
Sbjct: 356 PDEKTKKRIFQIHTSRMT----LADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL-RER 410
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
M V E K + ++ L+ E P
Sbjct: 411 RMK-----VTNEDFKKSKENVLYKKQEGTP 435
>POMBASE|SPAC31G5.19 [details] [associations]
symbol:abo1 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISM] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC31G5.19 GO:GO:0005524 EMBL:CU329670
GO:GO:0006357 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000157282 OrthoDB:EOG473T0K PIR:T38636
RefSeq:NP_594020.1 ProteinModelPortal:O14114 STRING:O14114
EnsemblFungi:SPAC31G5.19.1 GeneID:2543084 KEGG:spo:SPAC31G5.19
OMA:ITRIMAN NextBio:20804112 Uniprot:O14114
Length = 1190
Score = 374 (136.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 91/276 (32%), Positives = 148/276 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL + + + + P + + ++ +G+L +GPPGTGKTLMAR + +
Sbjct: 268 VGGLD-NYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSS 326
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
K+ G + LSK+VGE E+ +R LF +A++ Q + +I FDEID +
Sbjct: 327 ENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPS--------IIFFDEIDGLAP 378
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S ++ +H SIV+ LL +DG+ES V++IG TNR D +D AL RPGR + +
Sbjct: 379 VRSSKQEQ--IHASIVSTLLALMDGMESRGQVIIIGATNRPDAVDPALRRPGRFDREFYF 436
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LPD + R +I++IHT P+ LA ++K Y GA+L + A ++ R
Sbjct: 437 PLPDRDARKKIIEIHTRNWDPP---VPEWLCSMLAEKSKGYGGADLRALCTEAALNSIKR 493
Query: 457 ---QLSMDDLTKPVDEESIKVTMDDFLHALYEIVPA 489
QL +D ++IKV + DF+ ++ ++P+
Sbjct: 494 TYPQLYRSTKRLQIDPKTIKVKVKDFVMSMKRMIPS 529
>ZFIN|ZDB-GENE-030131-5754 [details] [associations]
symbol:wu:fi16e04 "wu:fi16e04" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS00674
PROSITE:PS50014 SMART:SM00297 SMART:SM00382
ZFIN:ZDB-GENE-030131-5754 GO:GO:0005524 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074694 EMBL:CABZ01038330
IPI:IPI00901018 Ensembl:ENSDART00000111963 Uniprot:E7EXJ5
Length = 1358
Score = 388 (141.6 bits), Expect = 7.3e-31, Sum P(3) = 7.3e-31
Identities = 107/276 (38%), Positives = 148/276 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + + ++P V K I+ +G L YGPPGTGKTL+AR + +
Sbjct: 392 IGGLGKHISALKEMVVFPLLYP-EVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQ 450
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
E K+ G + LSK+VGE+E+ +R LF DQ + S +I FDEID I
Sbjct: 451 GERKVAFFMRKGADCLSKWVGESERQLRLLF-----DQAYQMRPS---IIFFDEIDGIAP 502
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG++S V++IG TNR D +D AL RPGR + +
Sbjct: 503 VRSSRQDQ--IHSSIVSTLLALMDGLDSRGEVVVIGATNRLDSIDPALRRPGRFDREFLF 560
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+LPD R IL+IHT L+ D L+ELA + Y G +++ V A AL R
Sbjct: 561 NLPDREARKDILKIHTRHWDPQ--LS-DAFLEELADKCVGYCGTDIKAVCAEAALCALRR 617
Query: 457 ---QLSMDDLTKPVDEESIKVTMDDFLHALYEIVPA 489
Q+ +D ESI V+ DFL A+ +IVPA
Sbjct: 618 RYPQIYASSQKLLLDVESICVSGRDFLSAMRKIVPA 653
Score = 41 (19.5 bits), Expect = 7.3e-31, Sum P(3) = 7.3e-31
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 642 GTTSEVSFLDSVGICDAFSVTYHVPTLKTDDAKKVLKQLNVFAEEDVDSASEALNDM 698
G +E L+ + + ++ PT T V++++ +EE D+ + A+N++
Sbjct: 1171 GKPAESEDLEKMRDAECETMEVEGPTTSTS----VVQKITFVSEEQEDNTAAAVNEV 1223
Score = 39 (18.8 bits), Expect = 7.3e-31, Sum P(3) = 7.3e-31
Identities = 18/79 (22%), Positives = 32/79 (40%)
Query: 55 GDSFVLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEFV 114
GD ++ S S + +RR K + S+NR +P LL + + +
Sbjct: 313 GDGRRHAIHSSDSTSSSSSDEEKFERRRTK---SRNRSINRCLPMNLRKDDLLGIHKDRI 369
Query: 115 KKGSKNEQVDAVLLANQLR 133
K G+ VD + + +R
Sbjct: 370 KIGASLADVDPMQIDQTVR 388
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 371 (135.7 bits), Expect = 7.6e-31, P = 7.6e-31
Identities = 95/268 (35%), Positives = 146/268 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IG L + + A + V P LG+ G+LL GPPG GKTL+A+ + +G
Sbjct: 583 IGALE-DVREELTMAILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANE-SG 640
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V GPE+L+ +VGE+E+ +R +F QR R S VI FDE+DA+C R
Sbjct: 641 LNFISVKGPELLNMYVGESERAVRQVF------QRARN--SAPCVIFFDEVDALCPRRSD 692
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPD 400
G V +VNQLLT++DG+E+ V ++ TNR D++D A+LRPGRL+ + + LP
Sbjct: 693 RESGASVR--VVNQLLTEMDGLENRQQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPP 750
Query: 401 ENGRLQILQIHTNKMKENSFLAPDVNLQELA--ARTKNYSGAELEGVAKSAVSFALNRQL 458
RL IL+ T K L DVNL+E+A + Y+GA+L + + A AL +++
Sbjct: 751 PEDRLAILKTIT-KDGTRPPLDTDVNLEEIAYSQQCDCYTGADLSALVREASICALRQEM 809
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEI 486
++ ++ IK++ F A ++
Sbjct: 810 ALPTTKSKKEKGEIKISRKHFEEAFRKV 837
Score = 270 (100.1 bits), Expect = 9.0e-20, P = 9.0e-20
Identities = 86/242 (35%), Positives = 121/242 (50%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG +I + R P V LG+ +G LL+GPPG GKTL+A+ I L
Sbjct: 262 VGGNDETLKEICKMLIHVR--HPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAIAGELEL 319
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG- 339
K+ E++S GE+E+ +R+LF DQ V+ DEIDAI R
Sbjct: 320 PMLKVA-ATEMVSGVSGESEQKLRELF-----DQAVLNAPC---VLFIDEIDAITPKREV 370
Query: 340 STRDGTGVHDSIVNQLLTKID---GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
+++D + IV QLLT +D V + VL+IG TNR D LD AL R GR + ++ +
Sbjct: 371 ASKD---MERRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICL 427
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+PDE R +ILQ K+K L + LA T Y GA+L + + A +NR
Sbjct: 428 GIPDEAAREKILQTLCRKLK----LPGSFDFLHLAHLTPGYVGADLMALCREAAMCTVNR 483
Query: 457 QL 458
L
Sbjct: 484 VL 485
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 347 (127.2 bits), Expect = 8.7e-31, P = 8.7e-31
Identities = 91/237 (38%), Positives = 131/237 (55%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS + ++F A + KLG+K KG L++GPPGTGKTL+AR N
Sbjct: 187 IGGLSKQIEELFE-AIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNA 245
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ P+++ F+G+ K +RD FA A+ ++S +I DE+DAI R
Sbjct: 246 TFLKLA-APQLVQMFIGDGAKLVRDAFALAK-------EKSPA-IIFIDELDAIGTKRFD 296
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG S + V +I TNR D LD ALLR GRL+ ++E LP
Sbjct: 297 SEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLP 356
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+E R+ IL+IH+ KM + D+N +ELA T Y+GA L+ V A AL +
Sbjct: 357 NEEARVGILRIHSRKMA----IDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQ 409
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 346 (126.9 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 87/241 (36%), Positives = 136/241 (56%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL + +I + V P + LGI KG++LYGPPGTGKTL+AR + +
Sbjct: 146 VGGLDKQIKEI-KEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA---HH 201
Query: 281 MEPKI--VNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR 338
E K V+G E++ K++GE + +R+LF A + +I DEID+I SR
Sbjct: 202 TECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSIGSSR 253
Query: 339 --GSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
GS+ + V +++ +LL ++DG ES ++ +I TNR D+LD ALLRPGR++ ++E
Sbjct: 254 VEGSSGGDSEVQRTML-ELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEF 312
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
P R IL+IH+ M L +NL+++A + SGA+++GV A +AL
Sbjct: 313 PAPTVAARTDILKIHSRSMN----LTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRE 368
Query: 457 Q 457
+
Sbjct: 369 R 369
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 346 (126.9 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 87/243 (35%), Positives = 137/243 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ IGGLS + ++ R + P + ++GI KG LLYGPPGTGKTL+AR +
Sbjct: 129 NVSYSEIGGLSEQIREL-REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
L+ K+V+ ++ K++GE+ + IR++F A + Q +I DEIDAI
Sbjct: 188 ASQLDCNFLKVVSS-SIVDKYIGESARLIREMFNYARDHQPC--------IIFMDEIDAI 238
Query: 335 CKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLE 391
R S +GT I + +LL ++DG ++L+ V +I TNR D LD ALLRPGRL+
Sbjct: 239 GGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLD 296
Query: 392 VQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVS 451
++ I LP+E RL IL+IH + ++ +++ + + + ++GA+L V A
Sbjct: 297 RKIHIDLPNEQARLDILKIHAGPITKHG----EIDYEAIVKLSDGFNGADLRNVCTEAGM 352
Query: 452 FAL 454
FA+
Sbjct: 353 FAI 355
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 346 (126.9 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 86/229 (37%), Positives = 130/229 (56%)
Query: 249 LGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFA 308
LGI+ KG+L+YGPPGTGKTL+AR K+ GP+++ F+G+ K +RD FA
Sbjct: 232 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA-GPQLVQMFIGDGAKLVRDAFA 290
Query: 309 DAENDQRTRGDQSDLHVIIFDEIDAICKSR-GSTRDGTGVHDSIVNQLLTKIDGVESLNN 367
A+ + +I DE+DAI R S + G + +LL ++DG +
Sbjct: 291 LAKEKAPS--------IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQ 342
Query: 368 VLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNL 427
V +I TNR D+LD ALLR GRL+ ++E +P+E R +I+QIH+ KM ++PDVN
Sbjct: 343 VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN----VSPDVNY 398
Query: 428 QELAARTKNYSGAELEGVAKSAVSFALNR---QLSMDDLTKPVDEESIK 473
+ELA T +++GA+ + V A AL R +L+ +D + + E K
Sbjct: 399 EELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAK 447
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 346 (126.9 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 87/243 (35%), Positives = 137/243 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ IGGLS + ++ R + P + ++GI KG LLYGPPGTGKTL+AR +
Sbjct: 135 NVSYSEIGGLSEQIREL-REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 193
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
L+ K+V+ ++ K++GE+ + IR++F A + Q +I DEIDAI
Sbjct: 194 ASQLDCNFLKVVSS-SIVDKYIGESARLIREMFNYARDHQPC--------IIFMDEIDAI 244
Query: 335 CKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLE 391
R S +GT I + +LL ++DG ++L+ V +I TNR D LD ALLRPGRL+
Sbjct: 245 GGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLD 302
Query: 392 VQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVS 451
++ I LP+E RL IL+IH + ++ +++ + + + ++GA+L V A
Sbjct: 303 RKIHIDLPNEQARLDILKIHAGPITKHG----EIDYEAIVKLSDGFNGADLRNVCTEAGM 358
Query: 452 FAL 454
FA+
Sbjct: 359 FAI 361
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 346 (126.9 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 87/243 (35%), Positives = 137/243 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ IGGLS + ++ R + P + ++GI KG LLYGPPGTGKTL+AR +
Sbjct: 129 NVSYSEIGGLSEQIREL-REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
L+ K+V+ ++ K++GE+ + IR++F A + Q +I DEIDAI
Sbjct: 188 ASQLDCNFLKVVSS-SIVDKYIGESARLIREMFNYARDHQPC--------IIFMDEIDAI 238
Query: 335 CKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLE 391
R S +GT I + +LL ++DG ++L+ V +I TNR D LD ALLRPGRL+
Sbjct: 239 GGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLD 296
Query: 392 VQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVS 451
++ I LP+E RL IL+IH + ++ +++ + + + ++GA+L V A
Sbjct: 297 RKIHIDLPNEQARLDILKIHAGPITKHG----EIDYEAIVKLSDGFNGADLRNVCTEAGM 352
Query: 452 FAL 454
FA+
Sbjct: 353 FAI 355
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 346 (126.9 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 87/243 (35%), Positives = 137/243 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ IGGLS + ++ R + P + ++GI KG LLYGPPGTGKTL+AR +
Sbjct: 143 NVSYSEIGGLSEQIREL-REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 201
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
L+ K+V+ ++ K++GE+ + IR++F A + Q +I DEIDAI
Sbjct: 202 ASQLDCNFLKVVSS-SIVDKYIGESARLIREMFNYARDHQPC--------IIFMDEIDAI 252
Query: 335 CKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLE 391
R S +GT I + +LL ++DG ++L+ V +I TNR D LD ALLRPGRL+
Sbjct: 253 GGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLD 310
Query: 392 VQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVS 451
++ I LP+E RL IL+IH + ++ +++ + + + ++GA+L V A
Sbjct: 311 RKIHIDLPNEQARLDILKIHAGPITKHG----EIDYEAIVKLSDGFNGADLRNVCTEAGM 366
Query: 452 FAL 454
FA+
Sbjct: 367 FAI 369
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 346 (126.9 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 87/243 (35%), Positives = 137/243 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ IGGLS + ++ R + P + ++GI KG LLYGPPGTGKTL+AR +
Sbjct: 129 NVSYSEIGGLSEQIREL-REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
L+ K+V+ ++ K++GE+ + IR++F A + Q +I DEIDAI
Sbjct: 188 ASQLDCNFLKVVSS-SIVDKYIGESARLIREMFNYARDHQPC--------IIFMDEIDAI 238
Query: 335 CKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLE 391
R S +GT I + +LL ++DG ++L+ V +I TNR D LD ALLRPGRL+
Sbjct: 239 GGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLD 296
Query: 392 VQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVS 451
++ I LP+E RL IL+IH + ++ +++ + + + ++GA+L V A
Sbjct: 297 RKIHIDLPNEQARLDILKIHAGPITKHG----EIDYEAIVKLSDGFNGADLRNVCTEAGM 352
Query: 452 FAL 454
FA+
Sbjct: 353 FAI 355
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 346 (126.9 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 87/243 (35%), Positives = 137/243 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ IGGLS + ++ R + P + ++GI KG LLYGPPGTGKTL+AR +
Sbjct: 129 NVSYSEIGGLSEQIREL-REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
L+ K+V+ ++ K++GE+ + IR++F A + Q +I DEIDAI
Sbjct: 188 ASQLDCNFLKVVSS-SIVDKYIGESARLIREMFNYARDHQPC--------IIFMDEIDAI 238
Query: 335 CKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLE 391
R S +GT I + +LL ++DG ++L+ V +I TNR D LD ALLRPGRL+
Sbjct: 239 GGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLD 296
Query: 392 VQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVS 451
++ I LP+E RL IL+IH + ++ +++ + + + ++GA+L V A
Sbjct: 297 RKIHIDLPNEQARLDILKIHAGPITKHG----EIDYEAIVKLSDGFNGADLRNVCTEAGM 352
Query: 452 FAL 454
FA+
Sbjct: 353 FAI 355
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 346 (126.9 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 87/243 (35%), Positives = 137/243 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ IGGLS + ++ R + P + ++GI KG LLYGPPGTGKTL+AR +
Sbjct: 121 NVSYSEIGGLSEQIREL-REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 179
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
L+ K+V+ ++ K++GE+ + IR++F A + Q +I DEIDAI
Sbjct: 180 ASQLDCNFLKVVSS-SIVDKYIGESARLIREMFNYARDHQPC--------IIFMDEIDAI 230
Query: 335 CKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLE 391
R S +GT I + +LL ++DG ++L+ V +I TNR D LD ALLRPGRL+
Sbjct: 231 GGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLD 288
Query: 392 VQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVS 451
++ I LP+E RL IL+IH + ++ +++ + + + ++GA+L V A
Sbjct: 289 RKIHIDLPNEQARLDILKIHAGPITKHG----EIDYEAIVKLSDGFNGADLRNVCTEAGM 344
Query: 452 FAL 454
FA+
Sbjct: 345 FAI 347
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 346 (126.9 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 87/243 (35%), Positives = 137/243 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ IGGLS + ++ R + P + ++GI KG LLYGPPGTGKTL+AR +
Sbjct: 143 NVSYSEIGGLSEQIREL-REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 201
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
L+ K+V+ ++ K++GE+ + IR++F A + Q +I DEIDAI
Sbjct: 202 ASQLDCNFLKVVSS-SIVDKYIGESARLIREMFNYARDHQPC--------IIFMDEIDAI 252
Query: 335 CKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLE 391
R S +GT I + +LL ++DG ++L+ V +I TNR D LD ALLRPGRL+
Sbjct: 253 GGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLD 310
Query: 392 VQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVS 451
++ I LP+E RL IL+IH + ++ +++ + + + ++GA+L V A
Sbjct: 311 RKIHIDLPNEQARLDILKIHAGPITKHG----EIDYEAIVKLSDGFNGADLRNVCTEAGM 366
Query: 452 FAL 454
FA+
Sbjct: 367 FAI 369
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 369 (135.0 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 100/279 (35%), Positives = 150/279 (53%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P + K+GI G+LL+GPPG GKTL+A+ + I GPE+L+K+VGE+E++
Sbjct: 556 PELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISI-KGPELLNKYVGESERS 614
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
IR +F TR S VI FDE+DA+ R ++ + +VN LLT++DG+
Sbjct: 615 IRQVF--------TRARASVPCVIFFDELDALVPRRDTSLSESS--SRVVNTLLTELDGL 664
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLA 422
+ +IG TNR DM+D A+LRPGRL+ + I LP+ +L I++ T + L+
Sbjct: 665 NDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKS--HGTPLS 722
Query: 423 PDVNLQELAARTK--NYSGAELEGVAKSAVSFALNRQL----------------SMDDLT 464
DV+ +E+ K N+SGA+L + + + AL R+ +DL+
Sbjct: 723 SDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLS 782
Query: 465 KPVDEESIKVTMDDFLHALYEIVPAFGASTDDLERSRLN 503
V E I VTM DF AL +I P+ + D L+ RLN
Sbjct: 783 VGVSGEEIIVTMSDFRSALRKIKPSV-SDKDRLKYDRLN 820
Score = 286 (105.7 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 86/249 (34%), Positives = 134/249 (53%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
+L+SLG G+ A + + P + G++ +G+LL+GPPG GKT +A +
Sbjct: 203 SLKSLG--GMDDVVAQLME-LIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANAL 259
Query: 275 GKMLNGMEPKI-VNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDA 333
L P I ++ P V+S GE+EK IRDLF +A + ++ FDEIDA
Sbjct: 260 AGELQ--VPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPC--------LVFFDEIDA 309
Query: 334 ICKSR--GSTRDGTGVHDSIVNQLLTKIDGV--ESLNN--VLLIGMTNRKDMLDEALLRP 387
I R G+ R+ + IV QLLT +D + E N V++IG TNR D LD AL R
Sbjct: 310 ITPKRDGGAQRE---MERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRA 366
Query: 388 GRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAK 447
GR + ++ +++P+E RL IL+ KM +N + ++ +LA T + GA+L+ +
Sbjct: 367 GRFDREICLNVPNEVSRLHILK----KMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVT 422
Query: 448 SAVSFALNR 456
+A + A+ R
Sbjct: 423 AAGTCAIKR 431
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 345 (126.5 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 93/270 (34%), Positives = 148/270 (54%)
Query: 205 NSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPG 264
N F E + GIGGL+ + ++ R + P + +++GIK KG+LLYGPPG
Sbjct: 160 NMTTFEPGEISFN--GIGGLTEQIREL-REVIELPLKNPELFTRVGIKPPKGVLLYGPPG 216
Query: 265 TGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLH 324
TGKTL+A+ + + G ++ K++GE+ + IR++FA A+ +
Sbjct: 217 TGKTLLAKAVAATI-GANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPC-------- 267
Query: 325 VIIFDEIDAICKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLD 381
+I DE+DAI R S +GT I + +LL ++DG ++L +I TNR D LD
Sbjct: 268 IIFMDEVDAIGGRRFS--EGTSADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLD 325
Query: 382 EALLRPGRLEVQVEISLPDENGRLQILQIHTNKM-KENSFLAPDVNLQELAARTKNYSGA 440
ALLR GRL+ ++EI LP+E GRL+I +IHT+K+ K+ F + + + ++GA
Sbjct: 326 PALLRAGRLDRKIEIGLPNEAGRLEIFKIHTSKVAKQGEF-----DFEAAVKMSDGFNGA 380
Query: 441 ELEGVAKSAVSFAL--NRQ-LSMDDLTKPV 467
++ V A FA+ +R + +DL K V
Sbjct: 381 DIRNVVTEAGFFAIRDDRDYILQNDLMKAV 410
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 345 (126.5 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/237 (36%), Positives = 135/237 (56%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS + ++ R + P + ++GI KG LLYGPPGTGKTL+AR + L+
Sbjct: 149 IGGLSEQIREL-REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDC 207
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
K+V+ ++ K++GE+ + IR++F A + Q +I DEIDAI R S
Sbjct: 208 NFLKVVSS-SIVDKYIGESARLIREMFNYARDHQPC--------IIFMDEIDAIGGRRFS 258
Query: 341 TRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
+GT I + +LL ++DG ++L+ V +I TNR D LD ALLRPGRL+ ++ I
Sbjct: 259 --EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 316
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFAL 454
LP+E RL IL+IH + ++ +++ + + + ++GA+L V A FA+
Sbjct: 317 LPNEQARLDILKIHAGPITKHG----EIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 369
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 345 (126.5 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 86/237 (36%), Positives = 135/237 (56%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS + ++ R + P + ++GI KG LLYGPPGTGKTL+AR + L+
Sbjct: 135 IGGLSEQIREL-REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDC 193
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
K+V+ ++ K++GE+ + IR++F A + Q +I DEIDAI R S
Sbjct: 194 NFLKVVSS-SIVDKYIGESARLIREMFNYARDHQPC--------IIFMDEIDAIGGRRFS 244
Query: 341 TRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
+GT I + +LL ++DG ++L+ V +I TNR D LD ALLRPGRL+ ++ I
Sbjct: 245 --EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 302
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFAL 454
LP+E RL IL+IH + ++ +++ + + + ++GA+L V A FA+
Sbjct: 303 LPNEQARLDILKIHAGPITKHG----EIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 355
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 344 (126.2 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 89/237 (37%), Positives = 126/237 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I A + KLGIK KG L+YGPPGTGKTL+AR N
Sbjct: 213 IGGLDKQIEEIVE-AIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNA 271
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ + +I DE+DA+ R
Sbjct: 272 TFLKLA-GPQLVQMFIGDGAKLVRDCFALAKEKAPS--------IIFIDELDAVGTKRFD 322
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG S + + ++ TNR D+LD ALLR GRL+ ++E LP
Sbjct: 323 SEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLP 382
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+E R ILQIH+ KM + VN ELA T + GA+L+ V A AL +
Sbjct: 383 NEEARANILQIHSRKMT----VEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRK 435
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 344 (126.2 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 91/255 (35%), Positives = 139/255 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + P KLGI KG+LLYGPPGTGKTL AR + +
Sbjct: 188 VGGCKEQIEKL-REVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDA 246
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF A RT+ +I FDE+DAI +R
Sbjct: 247 TFIRVI-GSELVQKYVGEGARMVRELFEMA----RTK----KACIIFFDEVDAIGGARFD 297
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+T++DG + N+ ++ TNR + LD ALLRPGR++ +VE S
Sbjct: 298 --DGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFS 355
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-- 455
LPD GR I +IH+ M + D+ + ++ N +GAEL V A FA+
Sbjct: 356 LPDLEGRANIFRIHSKTMS----VEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRAR 411
Query: 456 RQLSMD-DLTKPVDE 469
R+++ + D K VD+
Sbjct: 412 RKVANEKDFLKAVDK 426
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 344 (126.2 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 87/243 (35%), Positives = 137/243 (56%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ IGGLS + ++ R + P + ++GI KG LLYGPPGTGKTL+AR +
Sbjct: 129 NVSYSEIGGLSEQIREL-REVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
L+ K+V+ ++ K++GE+ + IR++F A + Q +I DEIDAI
Sbjct: 188 ASQLDCNFLKVVSS-SIVDKYIGESARLIREMFNYARDHQPC--------IIFMDEIDAI 238
Query: 335 CKSRGSTRDGTGVHDSI---VNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLE 391
R S +GT I + +LL ++DG ++L+ V +I TNR D LD ALLRPGRL+
Sbjct: 239 GGRRFS--EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLD 296
Query: 392 VQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVS 451
++ I LP+E RL IL+IH + ++ +++ + + + ++GA+L V A
Sbjct: 297 RKIHIDLPNEQARLDILKIHAGPITKHG----EIDYEAIVKLSDGFNGADLGNVCTEAGM 352
Query: 452 FAL 454
FA+
Sbjct: 353 FAI 355
>ASPGD|ASPL0000044770 [details] [associations]
symbol:AN10191 species:162425 "Emericella nidulans"
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 GO:GO:0005524
EMBL:BN001307 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
EnsemblFungi:CADANIAT00008053 OMA:QPIMDQI Uniprot:C8VM55
Length = 1631
Score = 372 (136.0 bits), Expect = 1.9e-30, P = 1.9e-30
Identities = 97/281 (34%), Positives = 143/281 (50%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL D + + + P + + I +G+L +GPPGTGKTL+AR + ++
Sbjct: 571 VGGLQGHI-DQLKEMVSLPLLYPEIFQRFHIVPPRGVLFHGPPGTGKTLLARALANSVSS 629
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
K+ G + LSK+VGE E+ +R LF +A Q + +I FDEID +
Sbjct: 630 EGRKVTFYMRKGADALSKWVGEAERQLRLLFEEARKTQPS--------IIFFDEIDGLAP 681
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S ++ +H SIV+ LL +DG++ V++IG TNR D +D AL RPGR + +
Sbjct: 682 VRSSKQEQ--IHASIVSTLLALMDGMDGRGQVIVIGATNRPDSIDPALRRPGRFDREFYF 739
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LP+ GR IL IHT P+ ELA TK Y GA+L + A A+ R
Sbjct: 740 PLPNTEGRRAILDIHTKGWDPP---LPNSIKDELAEITKGYGGADLRALCTEAALNAVQR 796
Query: 457 ---QLSMDDLTKPVDEESIKVTMDDFLHALYEIVPAFGAST 494
Q+ D +D +I+V DF+ A+ I P+ ST
Sbjct: 797 RYPQIYKSDKKLLIDPRTIEVAPKDFMLAIKNITPSSERST 837
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 362 (132.5 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 96/237 (40%), Positives = 131/237 (55%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P +KLG + KG+LL GPPGTGKTL+AR + G+ ++G + + FVG
Sbjct: 175 PKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGEA-GVPFFSISGSDFVEMFVGVGASR 233
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDS---IVNQLLTKI 359
+RDLF +G ++ +I DEIDA+ + RG+ G G HD +NQLL ++
Sbjct: 234 VRDLFV--------QGKKNAPCIIFIDEIDAVGRHRGAGLGG-G-HDEREQTLNQLLVEM 283
Query: 360 DGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENS 419
DG ES V+LI TNR D+LD ALLRPGR + QV + PD GR IL++HT K
Sbjct: 284 DGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQPDVKGREMILKVHTKKTP--- 340
Query: 420 FLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTM 476
LA DV+L +A T +SGA+L V A A + S ++ K D+ KV M
Sbjct: 341 -LASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDKSFVEM-KDFDDAKDKVLM 395
>UNIPROTKB|E9PSU0 [details] [associations]
symbol:LOC500625 "Protein LOC500625" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 RGD:1566199 IPI:IPI00476926
Ensembl:ENSRNOT00000006877 ArrayExpress:E9PSU0 Uniprot:E9PSU0
Length = 1458
Score = 380 (138.8 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 102/276 (36%), Positives = 146/276 (52%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS + ++P + K I+ +G L YGPPGTGKTL+AR + +
Sbjct: 399 IGGLSHHIHALKEMVVFPLLYP-EIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQ 457
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
+ K+ G + LSK+VGE+E+ +R LF DQ S +I FDEID +
Sbjct: 458 GDKKVAFFMRKGADCLSKWVGESERQLRLLF-----DQAYLMRPS---IIFFDEIDGLAP 509
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG+++ +++IG TNR D +D AL RPGR + +
Sbjct: 510 VRSSRQDQ--IHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 567
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+LPD+ R ILQIHT N L+ D L ELA + Y GA+++ + A AL R
Sbjct: 568 NLPDQRARKHILQIHTRDW--NPKLS-DAFLGELAEKCVGYCGADIKALCTEAALIALRR 624
Query: 457 ---QLSMDDLTKPVDEESIKVTMDDFLHALYEIVPA 489
Q+ +D SI ++ DF A+ IVPA
Sbjct: 625 RYPQIYASSHKLQLDVSSIVLSAQDFYRAMQNIVPA 660
Score = 40 (19.1 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 538 LLEGPSGSGKTALAATAGIDSDFPF-VKIISAESMIGLHEST---KCAQIVK 585
LL G GSG+T+ A A + + F V + ++ + T CAQI +
Sbjct: 771 LLSGERGSGQTSHLAPALLHTLERFSVHRLDLPALYSVSAKTPEESCAQIFR 822
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 367 (134.2 bits), Expect = 2.8e-30, P = 2.8e-30
Identities = 91/250 (36%), Positives = 147/250 (58%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P + S LG++ G+LL+GPPGTGKTL+A+ + + + V GPE+++ +VG++E+N
Sbjct: 728 PELLS-LGLRR-SGLLLHGPPGTGKTLLAKAVATECS-LTFLSVKGPELINMYVGQSEEN 784
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R++FA R R +I FDE+D++ SRG + D GV D +V+QLL ++DG+
Sbjct: 785 VREVFA------RARAAAPC--IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGL 836
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL-PDENGRLQILQIHTNKMKENSFL 421
S +V +IG TNR D+LD ALLRPGR + V + D +L++L T K K L
Sbjct: 837 HSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFK----L 892
Query: 422 APDVNLQE-LAARTKNYSGAELEGVAKSAVSFALNRQL-SMDDLTKPVDEESIKVTMDDF 479
P V+L L +GA+L + A++ AL R++ +++ +P ++ +TM+D
Sbjct: 893 EPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGLEP-GSSALMLTMEDL 951
Query: 480 LHALYEIVPA 489
L A + P+
Sbjct: 952 LQAAARLQPS 961
Score = 134 (52.2 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 87/351 (24%), Positives = 150/351 (42%)
Query: 257 MLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRT 316
+LL GPPG GKT + L G+ V + ++ G E ++ +F+ A +R
Sbjct: 466 VLLRGPPGCGKTTVVAAACSHL-GLHLLKVPCSSLCAESSGAVETKLQAIFSRA---RRC 521
Query: 317 RGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHD---SIVNQLLTKIDGVESLNNVLLIGM 373
R V++ +D + G RDG G +++ LL D + S ++++
Sbjct: 522 RPA-----VLLLTAVDLL----GRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVAT 572
Query: 374 TNR-KDM-LDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELA 431
T+R +D+ D P LEV +S E RL IL+ T + L +VNL +LA
Sbjct: 573 TSRAQDLPADVQTAFPHELEVPA-LS---EGQRLSILRALTAHLP----LGQEVNLAQLA 624
Query: 432 ARTKNYSGAELEGV----AKSAVSFALNRQLSMDDLTKPVDEE----SIKVTMDDFLHAL 483
R + +L + +++A + N L+ LT+ + E + +DF AL
Sbjct: 625 RRCAGFVVGDLYALLTHSSRAACTRIKNSGLA-GGLTEEDEGELCAAGFPLLAEDFGQAL 683
Query: 484 YEIVPAFGASTDDLERSRLNGMVDCG---DRHKHIYQRAMLLVEQVKV-SKGSPLVTCLL 539
++ A + + ++ D G + K I + L +E ++ S G LL
Sbjct: 684 EQLQTAHSQAVGAPKIPSVSWH-DVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLL 742
Query: 540 EGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDA 590
GP G+GKT LA + F+ + E +I ++ + +VF A
Sbjct: 743 HGPPGTGKTLLAKAVATECSLTFLSVKGPE-LINMYVGQSEENVREVFARA 792
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 341 (125.1 bits), Expect = 3.9e-30, P = 3.9e-30
Identities = 89/257 (34%), Positives = 137/257 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + ++ A + LGI+ KG+L+YGPPGTGKTL+AR
Sbjct: 183 IGGLDKQIQELVE-AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 241
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ + +I DE+DA R
Sbjct: 242 TFLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKAPS--------IIFIDELDATGTKRFD 292
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG + V +I TNR D+LD ALLR GRL+ ++E +P
Sbjct: 293 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMP 352
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR--- 456
+E R +I+QIH+ KM ++PDVN +ELA +++GA+ + V A AL R
Sbjct: 353 NEEARARIMQIHSRKMN----VSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALRRGTT 408
Query: 457 QLSMDDLTKPVDEESIK 473
+L+ +D + + E K
Sbjct: 409 ELTHEDYMEGILEVQAK 425
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 341 (125.1 bits), Expect = 3.9e-30, P = 3.9e-30
Identities = 84/237 (35%), Positives = 128/237 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGG + ++ + LGI KG+L+YGPPGTGKT+MAR +
Sbjct: 179 IGGCDKQIQELIEAVVLPMTHKDRFVN-LGIHPPKGVLMYGPPGTGKTMMARAVAAQTKS 237
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ +I DE+DAI R
Sbjct: 238 TFLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKAPA--------IIFIDELDAIGTKRFD 288
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG + +++ +I TNR D+LD ALLR GRL+ ++E+ P
Sbjct: 289 SEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHP 348
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+E+ R +I+QIH+ KM N DVN +ELA T +++GA+ + V A AL R
Sbjct: 349 NEDARARIMQIHSRKMNVNK----DVNFEELARCTDDFNGAQCKAVCVEAGMIALRR 401
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 341 (125.1 bits), Expect = 3.9e-30, P = 3.9e-30
Identities = 84/237 (35%), Positives = 128/237 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGG + ++ + LGI KG+L+YGPPGTGKT+MAR +
Sbjct: 179 IGGCDKQIQELIEAVVLPMTHKDRFVN-LGIHPPKGVLMYGPPGTGKTMMARAVAAQTKS 237
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR-G 339
K+ GP+++ F+G+ K +RD FA A+ +I DE+DAI R
Sbjct: 238 TFLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKAPA--------IIFIDELDAIGTKRFD 288
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
S + G + +LL ++DG + +++ +I TNR D+LD ALLR GRL+ ++E+ P
Sbjct: 289 SEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHP 348
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+E+ R +I+QIH+ KM N DVN +ELA T +++GA+ + V A AL R
Sbjct: 349 NEDARARIMQIHSRKMNVNK----DVNFEELARCTDDFNGAQCKAVCVEAGMIALRR 401
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 363 (132.8 bits), Expect = 4.0e-30, P = 4.0e-30
Identities = 119/358 (33%), Positives = 172/358 (48%)
Query: 221 IGGLSAEFADIFRR-AFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLN 279
+GG+ FA + F R P +LG+ +G+LL GPPG GKTL+ R + K +
Sbjct: 189 LGGMEDVFASLKEMITFPLRY--PGSLRQLGLSCPRGLLLIGPPGVGKTLLVRCVAKDI- 245
Query: 280 GMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG 339
G VNGPEV GE+E+N+R +F A R D V++ DEID++C R
Sbjct: 246 GATLVTVNGPEVTGSRPGESEENLRRVFEQA----RDAADDGPC-VLLIDEIDSLCPRR- 299
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLP 399
T + + +V QLLT +D + S ++IG TN+ D LD AL RPGR + +V I +P
Sbjct: 300 -TGSSSAPENRLVAQLLTLMDAIGSHEGFVIIGATNQPDSLDPALRRPGRFDREVIIGVP 358
Query: 400 DENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLS 459
R IL+ +M L+PDV+L LA T Y GA+L +++ A A+ S
Sbjct: 359 SLLQRRSILKCVCREMP----LSPDVDLNTLAEMTCGYVGADLSALSREAALQAMRH--S 412
Query: 460 MDDLTKPVDEESIKVTMDDFLHALYEIVPA-----FGASTD--DLERSRLNGMVDCGDRH 512
++PV +M F+ AL + P+ GA TD + ++ G+ D +
Sbjct: 413 QMGASEPV-------SMQHFMQALRHVQPSCLRSSIGA-TDFKPIGWEQIGGLEDVKLKL 464
Query: 513 KHIYQRAMLLVEQ-VKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAE 569
K + M E V++ P LL GP G KT L A S F + AE
Sbjct: 465 KQSIEWPMRFPEAFVRLGVSRPRGV-LLYGPPGCAKTTLVKAAASSSHCSFFSLSGAE 521
Score = 168 (64.2 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 39/88 (44%), Positives = 56/88 (63%)
Query: 367 NVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVN 426
+VL++ TNR + LD ALLRPGRL+ + + PD RL +L+I T + L DV
Sbjct: 625 DVLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVP----LHQDVC 680
Query: 427 LQELAARTKNYSGAELEGVAKSAVSFAL 454
L++LAA+T+ +SGA+LE + K A AL
Sbjct: 681 LEDLAAQTELFSGADLENLCKEAALLAL 708
Score = 149 (57.5 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 39/122 (31%), Positives = 65/122 (53%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P +LG+ +G+LLYGPPG KT + + + + +G E+ S +VG++EK
Sbjct: 475 PEAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAASSSHCSFFSL-SGAELFSPYVGDSEKT 533
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSR--GSTRDGTGVHDSIVNQLLTKID 360
+ LFA A R ++ DE+D++ SR GS+ + V +++ LLT++D
Sbjct: 534 LAQLFAQA----RACAPS----IVFLDEVDSMVGSREDGSSSSHS-VQSQVLSVLLTELD 584
Query: 361 GV 362
GV
Sbjct: 585 GV 586
>WB|WBGene00004191 [details] [associations]
symbol:prx-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0006625 "protein targeting
to peroxisome" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040010 GO:GO:0005778 HSSP:Q01853 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 GeneTree:ENSGT00550000075032
EMBL:Z70205 UniGene:Cel.18145 GeneID:181538 KEGG:cel:CELE_C11H1.4
CTD:181538 NextBio:914356 EMBL:AB054992 PIR:T19207 PIR:T19208
RefSeq:NP_510386.2 ProteinModelPortal:G5ED99 SMR:G5ED99
EnsemblMetazoa:C11H1.4a WormBase:C11H1.4a OMA:PYPEHGI
Uniprot:G5ED99
Length = 996
Score = 365 (133.5 bits), Expect = 4.8e-30, P = 4.8e-30
Identities = 90/244 (36%), Positives = 145/244 (59%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVN--GPEVLSKFVGETE 300
P + +G+ KG+LL+GP G GKTL+A ++ +VN GPE+LSK++G +E
Sbjct: 751 PQLFESVGVPVSKGILLHGPSGCGKTLLANAT---ISNSNFSVVNVKGPELLSKYIGASE 807
Query: 301 KNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKID 360
+N+R +F A + ++ FDE+D++ RG D TGV D +VNQLLT++D
Sbjct: 808 ENVRLVFEKARSCAPC--------ILFFDELDSLAPKRG--HDSTGVTDRVVNQLLTELD 857
Query: 361 GVES-LNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENS 419
G E + V+++G T+R D++D+ALLRPGR + V P++ RL I+++ TNK+K
Sbjct: 858 GAEGGMKGVIILGCTSRIDLIDDALLRPGRFDHHVYCGHPEKTERLDIMKVLTNKLKPT- 916
Query: 420 FLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSM--DDLTK---PVDEESIKV 474
DV+ + LA +T +SGA+L+ + +A F RQ++ D L + P+D+ SI+
Sbjct: 917 ----DVDFECLAQKTDGWSGADLQLLFTNA-QFYNARQIAKEEDGLEEDNVPIDQASIES 971
Query: 475 TMDD 478
+D
Sbjct: 972 VFND 975
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 340 (124.7 bits), Expect = 5.0e-30, P = 5.0e-30
Identities = 90/270 (33%), Positives = 147/270 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL ++ +I + + + P ++GIK KG++LYG PGTGKTL+A+ + +
Sbjct: 187 IGGLDSQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSA 245
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++V G E++ K++G+ K +R+LF AE + ++ DEIDAI R
Sbjct: 246 TFLRVV-GSELIQKYLGDGPKLVRELFRVAEEHAPS--------IVFIDEIDAIGTKRYD 296
Query: 341 TRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
+ G G + + +LL ++DG +S +V +I TNR + LD AL+RPGR++ ++E L
Sbjct: 297 SNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
PDE + +I QIHT++M +A DV L +L + SGA+++ + A AL R+
Sbjct: 356 PDEKTKRRIFQIHTSRMT----VADDVTLDDLILAKDDLSGADIKAICTEAGLMAL-RER 410
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
M V E K + ++ L+ E P
Sbjct: 411 RMK-----VTNEDFKKSKENVLYKKQEGTP 435
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 363 (132.8 bits), Expect = 5.7e-30, P = 5.7e-30
Identities = 101/268 (37%), Positives = 146/268 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IG L + + A + V P LG+ G+LL GPPG GKTL+A+ + +G
Sbjct: 577 IGALE-DIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANE-SG 634
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V GPE+L+ +VGE+E+ +R +F QR R S VI FDE+DA+C R S
Sbjct: 635 LNFISVKGPELLNMYVGESERAVRQVF------QRARS--SAPCVIFFDEVDALCPRR-S 685
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPD 400
R+ TG +VNQLLT++DG+E+ V ++ TNR D++D A+LRPGRL+ + + LP
Sbjct: 686 DRE-TGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPP 744
Query: 401 ENGRLQILQIHTNKMKENSFLAPDVNLQELAA--RTKNYSGAELEGVAKSAVSFALNRQL 458
RL IL+ T K L DVNL+ LAA R YSGA+L + + A AL +++
Sbjct: 745 PADRLAILKTIT-KNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQEM 803
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEI 486
D +KV+ F A ++
Sbjct: 804 MRPK--GGGDRGELKVSQKHFEEAFKKV 829
Score = 273 (101.2 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 86/254 (33%), Positives = 128/254 (50%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG A ++ + R P V LG +G+LL+GPPG GKTL+A I L+
Sbjct: 261 VGGNDATLKEVCKMLIHMR--HPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDL 318
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG- 339
K+ EV+S GE+E+ +R+LF A ++ V+ DEIDAI R
Sbjct: 319 PILKVA-ATEVVSGVSGESEQKLRELFEQAVSNAPC--------VLFIDEIDAITPKREV 369
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLN---NVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
+++D + IV QLLT +D + + VL+IG TNR D LD AL R GR + ++ +
Sbjct: 370 ASKD---MERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICL 426
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+PDE R +ILQ K++ L + LA T + GA+L + + A A++R
Sbjct: 427 GIPDEASRERILQTLCRKLR----LPETFPFRHLAHLTPGFVGADLMALCREAAMCAVSR 482
Query: 457 QLSMDDLTKPVDEE 470
L +P D E
Sbjct: 483 VLMTLQEQQPTDPE 496
Score = 68 (29.0 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 32/137 (23%), Positives = 56/137 (40%)
Query: 466 PVDEESIK---VTMDDFLHALYEIVPAFGASTDDLERSRLNGMVDCG---DRHKHIYQRA 519
P+ EE ++ + +DF AL + P+ A + D G D + +
Sbjct: 534 PLSEEQLQGLCIEWNDFTVALSSVQPS--AKREGFVTVPSVTWADIGALEDIREELTMAI 591
Query: 520 MLLVEQVKVSKGSPLVT---CLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHE 576
+ V + + L+T LL GP G GKT LA +S F+ + E ++ ++
Sbjct: 592 LAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPE-LLNMYV 650
Query: 577 STKCAQIVKVFEDAYKS 593
+ +VF+ A S
Sbjct: 651 GESERAVRQVFQRARSS 667
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 363 (132.8 bits), Expect = 5.7e-30, P = 5.7e-30
Identities = 101/268 (37%), Positives = 146/268 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IG L + + A + V P LG+ G+LL GPPG GKTL+A+ + +G
Sbjct: 582 IGALE-DIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANE-SG 639
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V GPE+L+ +VGE+E+ +R +F QR R S VI FDE+DA+C R S
Sbjct: 640 LNFISVKGPELLNMYVGESERAVRQVF------QRARS--SAPCVIFFDEVDALCPRR-S 690
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPD 400
R+ TG +VNQLLT++DG+E+ V ++ TNR D++D A+LRPGRL+ + + LP
Sbjct: 691 DRE-TGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPP 749
Query: 401 ENGRLQILQIHTNKMKENSFLAPDVNLQELAA--RTKNYSGAELEGVAKSAVSFALNRQL 458
RL IL+ T K L DVNL+ LAA R YSGA+L + + A AL +++
Sbjct: 750 PADRLAILKTIT-KNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQEM 808
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEI 486
D +KV+ F A ++
Sbjct: 809 MRPK--GGGDRGELKVSQKHFEEAFKKV 834
Score = 273 (101.2 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 86/254 (33%), Positives = 128/254 (50%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG A ++ + R P V LG +G+LL+GPPG GKTL+A I L+
Sbjct: 261 VGGNDATLKEVCKMLIHMR--HPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDL 318
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG- 339
K+ EV+S GE+E+ +R+LF A ++ V+ DEIDAI R
Sbjct: 319 PILKVA-ATEVVSGVSGESEQKLRELFEQAVSNAPC--------VLFIDEIDAITPKREV 369
Query: 340 STRDGTGVHDSIVNQLLTKIDGVESLN---NVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
+++D + IV QLLT +D + + VL+IG TNR D LD AL R GR + ++ +
Sbjct: 370 ASKD---MERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICL 426
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
+PDE R +ILQ K++ L + LA T + GA+L + + A A++R
Sbjct: 427 GIPDEASRERILQTLCRKLR----LPETFPFRHLAHLTPGFVGADLMALCREAAMCAVSR 482
Query: 457 QLSMDDLTKPVDEE 470
L +P D E
Sbjct: 483 VLMTLQEQQPTDPE 496
Score = 68 (29.0 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 32/137 (23%), Positives = 56/137 (40%)
Query: 466 PVDEESIK---VTMDDFLHALYEIVPAFGASTDDLERSRLNGMVDCG---DRHKHIYQRA 519
P+ EE ++ + +DF AL + P+ A + D G D + +
Sbjct: 539 PLSEEQLQGLCIEWNDFTVALSSVQPS--AKREGFVTVPSVTWADIGALEDIREELTMAI 596
Query: 520 MLLVEQVKVSKGSPLVT---CLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHE 576
+ V + + L+T LL GP G GKT LA +S F+ + E ++ ++
Sbjct: 597 LAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPE-LLNMYV 655
Query: 577 STKCAQIVKVFEDAYKS 593
+ +VF+ A S
Sbjct: 656 GESERAVRQVFQRARSS 672
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 364 (133.2 bits), Expect = 5.9e-30, P = 5.9e-30
Identities = 89/250 (35%), Positives = 148/250 (59%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P + S LG++ G+LL+GPPGTGKTL+A+ + + + V GPE+++ +VG++E+N
Sbjct: 717 PELLS-LGLRR-SGLLLHGPPGTGKTLLAKAVATECS-LTFLSVKGPELINMYVGQSEEN 773
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R++FA R R +I FDE+D++ SRG + D GV D +V+QLL ++DG+
Sbjct: 774 VREVFA------RARAAAPC--IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGL 825
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENG-RLQILQIHTNKMKENSFL 421
S +V +IG TNR D+LD ALLRPGR + V + ++ +L++L T K + L
Sbjct: 826 HSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFR----L 881
Query: 422 APDVNLQELAARTK-NYSGAELEGVAKSAVSFALNRQL-SMDDLTKPVDEESIKVTMDDF 479
P V+L + +GA+L + A++ AL R++ ++D +P ++ +TM+D
Sbjct: 882 EPSVSLVAVLDHCPPQLTGADLYSLCADAMTAALKRRVRDLEDGLEP-GSSALLLTMEDL 940
Query: 480 LHALYEIVPA 489
L A + P+
Sbjct: 941 LQAAARLQPS 950
Score = 123 (48.4 bits), Expect = 0.00088, P = 0.00088
Identities = 87/351 (24%), Positives = 147/351 (41%)
Query: 257 MLLYGPPGTGKTL-MARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQR 315
+LL GPPG+GKT + G++ G+ V + + G E ++ F+ A +R
Sbjct: 455 VLLRGPPGSGKTTAVTAACGRL--GLHLLKVPCSSLCADSSGAVETKLQAAFSRA---RR 509
Query: 316 TRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIV---NQLLTKIDGVESLNNVLLIG 372
R V++ +D + G RDG G +V +LL D + S ++++
Sbjct: 510 CRPV-----VLLLTAVDLL----GRDRDGLGEDARVVATLRRLLLDEDPLTSHPPLMVVA 560
Query: 373 MTNR-KDM-LDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQEL 430
T+R +D+ D P LEV V +S E RL ILQ T + L +VNL +L
Sbjct: 561 TTSRAQDLPADVQTAFPHELEVPV-LS---EGQRLSILQALTAHLP----LGQEVNLAQL 612
Query: 431 AARTKNYSGAELEGVAKSAVSFALNRQLSMD---DLTKPVDEE----SIKVTMDDFLHAL 483
A R + +L + + A R + L++ + E + +D AL
Sbjct: 613 ARRCAGFVVGDLYALLTHSSRAACTRIKNSGWAGGLSEEDEGELCAAGFPLLAEDLGQAL 672
Query: 484 YEIVPAFGASTDDLERSRLNGMVDCG---DRHKHIYQRAMLLVEQVKV-SKGSPLVTCLL 539
++ A + + ++ D G + K I + L +E ++ S G LL
Sbjct: 673 EQLQSAHSQAVGAPKIPSVSWH-DVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLL 731
Query: 540 EGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDA 590
GP G+GKT LA + F+ + E +I ++ + +VF A
Sbjct: 732 HGPPGTGKTLLAKAVATECSLTFLSVKGPE-LINMYVGQSEENVREVFARA 781
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 339 (124.4 bits), Expect = 6.4e-30, P = 6.4e-30
Identities = 89/255 (34%), Positives = 137/255 (53%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + P LGI KG LLYGPPGTGKTL AR + +
Sbjct: 187 VGGCKEQIEKL-REVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDA 245
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF A RT+ +I FDEIDA+ +R
Sbjct: 246 TFIRVI-GSELVQKYVGEGARMVRELFEMA----RTK----KACIIFFDEIDAVGGARFD 296
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+T++DG ++ N+ ++ TNR LD AL+RPGR++ ++E S
Sbjct: 297 --DGAGGDNEVQRTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFS 354
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-- 455
LPD GR IL+IH M + D+ + ++ N +GAEL VA A FA+
Sbjct: 355 LPDVEGRANILRIHAKSMS----VERDIRWELISRLCPNATGAELRSVATEAGMFAIRAR 410
Query: 456 RQLSMD-DLTKPVDE 469
R+++ + D VD+
Sbjct: 411 RKVATEKDFLAAVDK 425
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 339 (124.4 bits), Expect = 6.4e-30, P = 6.4e-30
Identities = 88/255 (34%), Positives = 132/255 (51%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + P LGI KG+L+YGPPGTGKTL AR + +
Sbjct: 172 VGGCKEQIEKL-REVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDA 230
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +RDLF Q R ++ +I FDE+DAI +R
Sbjct: 231 AFVRVI-GSELVQKYVGEGARMVRDLF------QMARSKKAC--IIFFDEVDAIGGARFD 281
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+ ++DG + N+ ++ TNR D LD ALLRPGRL+ +VE
Sbjct: 282 --DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 339
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ 457
LPD GR I IH M A D+ + LA N +GA++ V A FA+ +
Sbjct: 340 LPDLEGRAHIFTIHAKTMS----CARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRAR 395
Query: 458 ---LSMDDLTKPVDE 469
+S D + +D+
Sbjct: 396 RKVVSEKDFLEAIDK 410
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 339 (124.4 bits), Expect = 6.4e-30, P = 6.4e-30
Identities = 89/255 (34%), Positives = 139/255 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + + P LGI+ KG+LL+GPPGTGKTL AR + +
Sbjct: 177 VGGCKEQIEKL-REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 235
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF A RT+ +I FDEIDAI +R
Sbjct: 236 CFIRVI-GSELVQKYVGEGARMVRELFEMA----RTK----KACLIFFDEIDAIGGARFD 286
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+ ++DG + N+ ++ TNR D LD AL+RPGRL+ ++E S
Sbjct: 287 --DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-- 455
LPD GR IL+IH M + D+ + LA N +GAE+ V A FA+
Sbjct: 345 LPDLEGRTHILKIHARSMS----VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 456 RQLSMD-DLTKPVDE 469
R+++ + D + V++
Sbjct: 401 RKIATEKDFLEAVNK 415
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 358 (131.1 bits), Expect = 6.9e-30, P = 6.9e-30
Identities = 89/219 (40%), Positives = 126/219 (57%)
Query: 248 KLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLF 307
KLG K KG LL G PGTGKTL+AR I N + ++G + + FVG +RD+F
Sbjct: 183 KLGGKIPKGCLLIGSPGTGKTLLARAIAGEAN-VPFFSISGSDFVEMFVGVGASRVRDMF 241
Query: 308 ADAENDQRTRGDQSDLHVIIFDEIDAICKSRG-STRDGTGVHDSIVNQLLTKIDGVESLN 366
+G ++ +I DEIDA+ + RG G + +NQLL ++DG ES
Sbjct: 242 E--------QGKKNAPCIIFIDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNE 293
Query: 367 NVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVN 426
V++I TNR D+LD ALLRPGR + QV IS+PD NGR +I+ +H K+ APDVN
Sbjct: 294 GVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKIINVHIKKVPT----APDVN 349
Query: 427 LQELAARTKNYSGAELEGVAKSAVSFA--LNRQL-SMDD 462
++ +A T +SGA+L + A A LN+++ +M D
Sbjct: 350 IRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTMSD 388
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 358 (131.1 bits), Expect = 6.9e-30, P = 6.9e-30
Identities = 89/219 (40%), Positives = 126/219 (57%)
Query: 248 KLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLF 307
KLG K KG LL G PGTGKTL+AR I N + ++G + + FVG +RD+F
Sbjct: 183 KLGGKIPKGCLLIGSPGTGKTLLARAIAGEAN-VPFFSISGSDFVEMFVGVGASRVRDMF 241
Query: 308 ADAENDQRTRGDQSDLHVIIFDEIDAICKSRG-STRDGTGVHDSIVNQLLTKIDGVESLN 366
+G ++ +I DEIDA+ + RG G + +NQLL ++DG ES
Sbjct: 242 E--------QGKKNAPCIIFIDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNE 293
Query: 367 NVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVN 426
V++I TNR D+LD ALLRPGR + QV IS+PD NGR +I+ +H K+ APDVN
Sbjct: 294 GVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKIINVHIKKVPT----APDVN 349
Query: 427 LQELAARTKNYSGAELEGVAKSAVSFA--LNRQL-SMDD 462
++ +A T +SGA+L + A A LN+++ +M D
Sbjct: 350 IRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTMSD 388
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 363 (132.8 bits), Expect = 7.7e-30, P = 7.7e-30
Identities = 88/250 (35%), Positives = 149/250 (59%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P + S LG++ G+LL+GPPGTGKTL+A+ + + + V GPE+++ +VG++E+N
Sbjct: 728 PELLS-LGLRR-SGLLLHGPPGTGKTLLAKAVATECS-LTFLSVKGPELINMYVGQSEEN 784
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R++FA R R +I FDE+D++ +RG + D GV D +V+QLL ++DG+
Sbjct: 785 VREVFA------RARAAAPC--IIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGL 836
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL-PDENGRLQILQIHTNKMKENSFL 421
S +V +IG TNR D+LD ALLRPGR + V + + D +L++L T K + L
Sbjct: 837 HSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVNEDRASQLRVLSAITRKFR----L 892
Query: 422 APDVNLQELAARTK-NYSGAELEGVAKSAVSFALNRQL-SMDDLTKPVDEESIKVTMDDF 479
P V+L ++ +GA+L + A++ AL R++ +++ +P ++ +TM+D
Sbjct: 893 EPSVSLVDVLDHCPPQLTGADLYSLCSDAMTAALKRRVRDLEEGLEP-GSSALLLTMEDL 951
Query: 480 LHALYEIVPA 489
L A + P+
Sbjct: 952 LQAAARLQPS 961
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 358 (131.1 bits), Expect = 7.8e-30, P = 7.8e-30
Identities = 85/228 (37%), Positives = 127/228 (55%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P + +G K KG+LL GPPGTGKTL+A+ I G+ ++G E + FVG
Sbjct: 194 PERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEA-GVPFFSISGSEFVEMFVGVGASR 252
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS-TRDGTGVHDSIVNQLLTKIDG 361
+RDLF A+ + +I DEIDA+ + RG+ G + +NQLLT++DG
Sbjct: 253 VRDLFKKAKENAPC--------LIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDG 304
Query: 362 VESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFL 421
E +++I TNR D+LD AL+RPGR + QV + PD +GR +IL++H K L
Sbjct: 305 FEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKK----L 360
Query: 422 APDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDE 469
AP+V++ +A RT +SGA+L + A R+ S L + +D+
Sbjct: 361 APEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLE-IDD 407
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 360 (131.8 bits), Expect = 8.1e-30, P = 8.1e-30
Identities = 84/238 (35%), Positives = 135/238 (56%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P ++LG++ +G+LLYGPPG GKT + R + + V G E++ K+VG +EK
Sbjct: 487 PDTFARLGVEPPRGVLLYGPPGCGKTFVVRALAST-GQLSVHAVKGSELMDKWVGSSEKA 545
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R+LF +R R L + DE+DA+ RG + D +GV D +V LLT++DG+
Sbjct: 546 VRELF------RRARDSAPSL--VFLDELDALAPRRGQSFD-SGVSDRVVAALLTELDGI 596
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLA 422
+ L +V+++G TNR D++D ALLRPGRLE V + PD R +IL+ + L+
Sbjct: 597 DPLRDVVMLGATNRPDLIDPALLRPGRLERLVFVEPPDAAARREILRTAGKSIP----LS 652
Query: 423 PDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKP---VDEESIKVTMD 477
DV+L E+AA YS A+ + + A A+ R + ++T E+++ ++D
Sbjct: 653 SDVDLDEVAAGLDGYSAADCVALLREAALTAMRRSIDAANVTAADLATARETVRASLD 710
Score = 122 (48.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 59/215 (27%), Positives = 96/215 (44%)
Query: 349 DSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQIL 408
+ + + +L+++ + V+LI + R D LD L P + ++ + LPD R +L
Sbjct: 321 EPVASLILSELRTAVATAGVVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKSLL 380
Query: 409 QIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVD 468
+ N + D+NL E+A+RT + A+L + + A A +R + D P+
Sbjct: 381 EALLNPVPTG-----DLNLDEIASRTPGFVVADLAALVREAALRAASRASA--DGRPPM- 432
Query: 469 EESIKVTMDDFLHALYEIVPAFGASTDDLERSRLNGMVDCGDRH--KHIYQRAMLLVEQ- 525
+ DD L AL I P +++D++ + + D GD K A+L Q
Sbjct: 433 -----LHQDDLLGALTVIRPLSRSASDEVTVGDVT-LDDVGDMAAAKQALTEAVLWPLQH 486
Query: 526 --VKVSKG-SPLVTCLLEGPSGSGKT----ALAAT 553
G P LL GP G GKT ALA+T
Sbjct: 487 PDTFARLGVEPPRGVLLYGPPGCGKTFVVRALAST 521
Score = 74 (31.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
PH+ LG G+L+ GP G GK + R + +G ++GPE+ + G+ K
Sbjct: 236 PHLLQTLGAGTNLGVLVSGPAGVGKATLVRAV---CDGRRLVTLDGPEIGALAAGDRVKA 292
Query: 303 I 303
+
Sbjct: 293 V 293
>FB|FBgn0013563 [details] [associations]
symbol:Pex1 "Peroxin 1" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006625 "protein targeting to
peroxisome" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0048137 "spermatocyte division" evidence=IMP]
[GO:0021782 "glial cell development" evidence=IMP] [GO:0007422
"peripheral nervous system development" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:AE014296
GO:GO:0006200 GO:GO:0007422 GO:GO:0007417 GO:GO:0007031
GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0048137 UniGene:Dm.10724
GO:GO:0021782 GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 GeneTree:ENSGT00550000075032 EMBL:AY075423
RefSeq:NP_652016.1 SMR:Q9VUC7 IntAct:Q9VUC7 MINT:MINT-335404
STRING:Q9VUC7 EnsemblMetazoa:FBtr0075777 GeneID:45460
KEGG:dme:Dmel_CG6760 UCSC:CG6760-RA FlyBase:FBgn0013563
InParanoid:Q9VUC7 OMA:VLMWPSR OrthoDB:EOG4BNZSX GenomeRNAi:45460
NextBio:838158 Uniprot:Q9VUC7
Length = 1006
Score = 363 (132.8 bits), Expect = 8.1e-30, P = 8.1e-30
Identities = 86/231 (37%), Positives = 134/231 (58%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P + + +++ G+LLYGPPGTGKT + Q+ N + V GPE+L+K++G++E+N
Sbjct: 743 PTIFNASPLRNQAGVLLYGPPGTGKTYLVSQLATSWN-LRIISVKGPELLAKYIGQSEEN 801
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R+LF R R + V+ FDE D++ RG D TGV D +VNQLLT++DGV
Sbjct: 802 VRNLF------NRARSARPC--VLFFDEFDSLAPKRG--HDSTGVTDRVVNQLLTELDGV 851
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLA 422
E L V +I T+R ++LD ALLR GR++ VE LPD R++I + ++ + L
Sbjct: 852 EGLQGVTVIAATSRPELLDPALLRSGRIDRLVECPLPDAPARVRIFEALSSTLS----LD 907
Query: 423 PDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIK 473
V+ A +T NY+GA+++ + SA A+ L+ K + S+K
Sbjct: 908 ECVDFDWFAGKTANYTGADIQSILTSANMAAVKEALAQFGHEKLAKKISLK 958
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 338 (124.0 bits), Expect = 8.2e-30, P = 8.2e-30
Identities = 83/250 (33%), Positives = 140/250 (56%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGL + +I + A + P ++GI+ KG++LYG PGTGKTL+A+ + +
Sbjct: 190 VGGLDQQIQEI-KEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSA 248
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+IV G E++ K++G+ K +R+LF AE + + ++ DEIDA+ R
Sbjct: 249 TFLRIV-GSELIQKYLGDGPKMVRELFRVAEENAPS--------IVFIDEIDAVGTKRYD 299
Query: 341 TRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
+ G G + + +LL ++DG +S +V ++ TNR + LD AL+RPGR++ ++E L
Sbjct: 300 SNSG-GEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPL 358
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQ- 457
PDE + +I QIHT++M L +VNL+E SGA+++ + A AL +
Sbjct: 359 PDEKTKRRIFQIHTSRMT----LGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERR 414
Query: 458 --LSMDDLTK 465
++M+D K
Sbjct: 415 MRVTMEDFQK 424
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 338 (124.0 bits), Expect = 8.2e-30, P = 8.2e-30
Identities = 90/270 (33%), Positives = 147/270 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGL + +I + + + P ++GIK KG++LYG PGTGKTL+A+ + +
Sbjct: 187 IGGLDNQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSA 245
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
++V G E++ K++G+ K +R+LF AE + ++ DEIDAI R
Sbjct: 246 TFLRVV-GSELIQKYLGDGPKLVRELFRVAEEHAPS--------IVFIDEIDAIGTKRYD 296
Query: 341 TRDGTGVHD--SIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL 398
+ G G + + +LL ++DG +S +V +I TNR + LD AL+RPGR++ ++E L
Sbjct: 297 SNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 399 PDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
PDE + +I QIHT++M +A DV+L +L + SGA+++ + A AL R+
Sbjct: 356 PDEKTKRRIFQIHTSRMT----VAEDVSLDDLILAKDDLSGADIKAICTEAGLMAL-RER 410
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEIVP 488
M V E K + ++ L+ E P
Sbjct: 411 RMK-----VTNEDFKKSKENVLYKKQEGTP 435
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 356 (130.4 bits), Expect = 8.9e-30, P = 8.9e-30
Identities = 101/291 (34%), Positives = 156/291 (53%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ IG L + + A + V P LG+ G+LL GPPG GKTL+A+ +
Sbjct: 301 NVTWADIGALE-DIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAV 359
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
+G+ V GPE+L+ +VGE+E+ +R +F A+N VI FDE+DA+
Sbjct: 360 ANE-SGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPC--------VIFFDEVDAL 410
Query: 335 CKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQV 394
C R S R+ TG +VNQLLT++DG+E+ V ++ TNR D++D A+LRPGRL+ +
Sbjct: 411 CPRR-SDRE-TGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTL 468
Query: 395 EISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAA--RTKNYSGAELEGVAKSAVSF 452
+ LP RL IL+ T K L DVNL+ +A R Y+GA+L + + A
Sbjct: 469 FVGLPPPADRLAILKTIT-KNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASIC 527
Query: 453 ALNRQLSMDDLTKPVDEES-IKVTMDDFLHALYEIVPAFGASTDDLERSRL 502
AL ++++ K +E+ +KV+ F A ++ + + D + RL
Sbjct: 528 ALRQEMARQ---KSGNEKGELKVSHKHFEEAFKKVRSSI-SKKDQIMYERL 574
Score = 204 (76.9 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 63/177 (35%), Positives = 93/177 (52%)
Query: 286 VNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRG-STRDG 344
V PE++S GE+E+ +R+LF A ++ +I DEIDAI R +++D
Sbjct: 53 VAAPEIVSGVSGESEQKLRELFEQAVSNAPC--------IIFIDEIDAITPKREVASKD- 103
Query: 345 TGVHDSIVNQLLTKID---GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDE 401
+ IV QLLT +D V + VL+IG TNR D LD AL R GR + ++ + +PDE
Sbjct: 104 --MERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 161
Query: 402 NGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL 458
R +ILQ K++ L + LA T + GA+L + + A A+NR L
Sbjct: 162 ASRERILQTLCRKLR----LPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVL 214
Score = 77 (32.2 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 37/149 (24%), Positives = 61/149 (40%)
Query: 454 LNRQLSMDDLTKPVDEESIK---VTMDDFLHALYEIVPAFGASTDDLERSRLNGMVDCG- 509
L R L + P+ EE ++ + ++DF+ AL + P+ A + D G
Sbjct: 252 LQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPS--AKREGFVTVPNVTWADIGA 309
Query: 510 --DRHKHIYQRAMLLVEQVKVSKGSPLVT---CLLEGPSGSGKTALAATAGIDSDFPFVK 564
D + + + V K LVT LL GP G GKT LA +S F+
Sbjct: 310 LEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFIS 369
Query: 565 IISAESMIGLHESTKCAQIVKVFEDAYKS 593
+ E ++ ++ + +VF+ A S
Sbjct: 370 VKGPE-LLNMYVGESERAVRQVFQRAKNS 397
>UNIPROTKB|G4MQP9 [details] [associations]
symbol:MGG_09299 "Peroxisome biosynthesis protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005778 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:CM001231 GO:GO:0043581 GO:GO:0042623 GO:GO:0006625 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_003709948.1
ProteinModelPortal:G4MQP9 EnsemblFungi:MGG_09299T0 GeneID:2680162
KEGG:mgr:MGG_09299 Uniprot:G4MQP9
Length = 1250
Score = 363 (132.8 bits), Expect = 9.5e-30, Sum P(2) = 9.5e-30
Identities = 86/230 (37%), Positives = 132/230 (57%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
IGGLS + + P + ++ ++ G+LLYG PG GKTL+A + G
Sbjct: 856 IGGLSETRRVLLETLQYPTKYAP-IFAQCPLRLRSGLLLYGYPGCGKTLLASAVAGEC-G 913
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V GPE+L+K++G +EK++RDLF R + V+ FDE D+I RG
Sbjct: 914 LNFISVKGPEILNKYIGASEKSVRDLFE--------RASAAKPCVLFFDEFDSIAPKRG- 964
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPD 400
D TGV D +VNQLLT++DG E L+ V ++ T+R D++D ALLRPGRL+ + P+
Sbjct: 965 -HDSTGVTDRVVNQLLTQMDGAEGLSGVYVLAATSRPDLIDPALLRPGRLDKSLICDFPN 1023
Query: 401 ENGRLQILQIHTNKMKENS-FLAPDVNLQELAARTKNYSGAELEGVAKSA 449
RL I++ +K+K LA + L ELA RT+ ++GA+L+ + ++
Sbjct: 1024 AEDRLDIIRALASKVKVGEEVLANEAELLELARRTEGFTGADLQALMSNS 1073
Score = 51 (23.0 bits), Expect = 9.5e-30, Sum P(2) = 9.5e-30
Identities = 16/70 (22%), Positives = 31/70 (44%)
Query: 161 NGAAVEGQEKSNALERGIITNETYFVFEASNDSGIKIVNQREGANSNIFRHKEFNLQSLG 220
+G G+ +NAL+R + TYF + + ++ RE N +F + + +
Sbjct: 564 SGKTSVGKSIANALKRDSFYHTTYFTCRSLTNDESRVATVRETLN-RLFMNASWGAR--- 619
Query: 221 IGGLSAEFAD 230
+GG + D
Sbjct: 620 LGGKAIVILD 629
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 360 (131.8 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 99/284 (34%), Positives = 148/284 (52%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+G L + + A + + P LG+ G+LL GPPG GKTL+A+ + +G
Sbjct: 522 VGALQ-DVREELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANA-SG 579
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+ V GPE+L+ +VGE+E+ +R +F RG S VI FDEIDA+C R
Sbjct: 580 LNFISVKGPELLNMYVGESERAVRQVFQ--------RGRNSAPCVIFFDEIDALCPRRSE 631
Query: 341 TRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPD 400
G V +VNQLLT++DG+E+ V ++ TNR D++D A+LRPGRL+ + + LP
Sbjct: 632 HESGASVR--VVNQLLTEMDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPP 689
Query: 401 ENGRLQILQIHTNKMKENSFLAPDVNLQELA--ARTKNYSGAELEGVAKSAVSFALNRQL 458
R IL T K L DV+L+E+A AR + ++GA+L + + A AL L
Sbjct: 690 AADRHAILNTIT-KGGTKPQLDSDVSLEEIAHDARCETFTGADLSALVREACVNALRVHL 748
Query: 459 SMDDLTKPVDEESIKVTMDDFLHALYEIVPAFGASTDDLERSRL 502
T + I+V+ F A ++ P+ + D L RL
Sbjct: 749 DPAQ-THTESAKDIRVSRVHFEDAFKKVRPSV-SKKDQLMYERL 790
Score = 294 (108.6 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 81/237 (34%), Positives = 125/237 (52%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P V +LG+ +G LL+GPPG GKTL+A+ + + ++ PE++S GE+E+
Sbjct: 249 PEVYQRLGVVPPRGFLLHGPPGCGKTLLAQAVAGE-TALPLLKISAPELVSGVSGESEQK 307
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
+R+LF A + ++ DEIDAI R + + IV QLLT +D +
Sbjct: 308 LRELFEQAISSAPC--------ILFIDEIDAITPKRETA--SKDMERRIVAQLLTCMDDL 357
Query: 363 ESL---NNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENS 419
S+ VL+IG TNR D LD AL R GR + ++ + +PDE R++IL+ K++
Sbjct: 358 NSMLEPAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEGARMKILKTLCRKIR--- 414
Query: 420 FLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTM 476
L D + + LA T Y GA+L + + A A+NR L +P E+ I T+
Sbjct: 415 -LPDDFDFRHLARLTPGYVGADLMALCREAAMNAVNRIL-----LEPTTEDQITPTL 465
Score = 72 (30.4 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 34/145 (23%), Positives = 59/145 (40%)
Query: 451 SFALNRQLSMDDLTKPVDEESIK---VTMDDFLHALYEIVPAF---G-ASTDDLERSRLN 503
+ AL R L + + + E+ + V M DF +L + P+ G A+ D+ + +
Sbjct: 464 TLALARLLDLLKSSVSLSEDQLAALCVLMSDFSSSLVRVQPSAKREGFATVPDVTWADVG 523
Query: 504 GMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFV 563
+ D + + EQ K S LL GP G GKT LA S F+
Sbjct: 524 ALQDVREELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFI 583
Query: 564 KIISAESMIGLHESTKCAQIVKVFE 588
+ E ++ ++ + +VF+
Sbjct: 584 SVKGPE-LLNMYVGESERAVRQVFQ 607
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 337 (123.7 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 86/237 (36%), Positives = 129/237 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + P KLGI KG++LYGPPGTGKTL AR + +
Sbjct: 181 VGGCKEQIERL-REVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDA 239
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF A RT+ +I FDEIDAI +R
Sbjct: 240 TFIRVI-GSELVQKYVGEGARMVRELFEMA----RTK----KACIIFFDEIDAIGGARFD 290
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+T++DG + N+ ++ TNR + LDEAL+RPGR++ +VE
Sbjct: 291 --DGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFG 348
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFAL 454
LPD GR IL+IH M + D+ + +A + +GAEL V A FA+
Sbjct: 349 LPDLEGRAHILRIHAKSMA----IDKDIRWELIARLCPSQTGAELRSVCTEAGMFAI 401
>ZFIN|ZDB-GENE-081104-252 [details] [associations]
symbol:pex6 "peroxisomal biogenesis factor 6"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-081104-252
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074953
EMBL:CU469387 IPI:IPI00836958 Ensembl:ENSDART00000104613
Bgee:F1QMB0 Uniprot:F1QMB0
Length = 1071
Score = 362 (132.5 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 93/264 (35%), Positives = 152/264 (57%)
Query: 243 PHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKN 302
P + S LG++ G+LLYGPPGTGKTL+A+ + M V GPE+++ +VG++E+N
Sbjct: 819 PELLS-LGLRR-SGLLLYGPPGTGKTLLAKAVATECT-MTFLSVKGPELINMYVGQSEEN 875
Query: 303 IRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 362
IR + + A + +I FDE+D++ +RG + D GV D +V+QLL ++DG+
Sbjct: 876 IRQVSSKARSAAPC--------IIFFDELDSLAPNRGHSGDSGGVMDRVVSQLLAELDGL 927
Query: 363 ESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISL-PDENGRLQILQIHTNKMK-ENSF 420
S +V +IG TNR D+LD++LLRPGR + V + + D +LQ+L+ K K + S
Sbjct: 928 HSSGDVFVIGATNRPDLLDQSLLRPGRFDKLVYVGINEDRESQLQVLKAILRKFKVDASV 987
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTM--DD 478
D+ ++ R +GA+L + A+ A+ R++S +T+ VD E +T+ +D
Sbjct: 988 CLSDI-VESCPPRL---TGADLYSLCSDAMMCAVKRKISR--ITEGVDSELSSLTLCSED 1041
Query: 479 FLHALYEIVPAFGASTDDLERSRL 502
F AL + P+ S + R +L
Sbjct: 1042 FSEALSGLQPS--VSEQQISRYQL 1063
Score = 127 (49.8 bits), Expect = 0.00037, P = 0.00037
Identities = 78/348 (22%), Positives = 143/348 (41%)
Query: 240 VFPPHVT-SKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGE 298
+ PH+ S L +K +LL GP G+GK R + + L+ K V+ + +
Sbjct: 544 IIQPHLNESTLILKRGCSILLMGPNGSGKFTAVRAVSRRLHLHLIK-VDCVTLCADTAAA 602
Query: 299 TEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTK 358
+E I+ +F AE +++ + + G +RDG + L
Sbjct: 603 SEAKIKSVFERAELHHPC--------LLLLRNLQLL----GQSRDGAETDCRVAATLCQL 650
Query: 359 IDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKEN 418
I V + +V+++G + + L ++ +V +E SL ++ R+ + + + E+
Sbjct: 651 IAAVHT--SVVVVGSVSSQHELPSDVMAAFVHQVAIE-SLSEDQRRMVL-----SSLSED 702
Query: 419 SFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLS--MDDLTKPVDEES----- 471
L DVNL +A +T + +L + +A A R + + +EE
Sbjct: 703 LLLGKDVNLGRIAKQTAGFVLGDLCALLTNAGKAAHRRLVETYFPEAVSEQEEEDLCVSG 762
Query: 472 IKVTMDDFLHALYEIVPAFGASTDDLERSRLNGMVDCGDRH---KHIYQRAMLLVEQVKV 528
+ VT +DF AL + A + + ++ D G K I L +E ++
Sbjct: 763 VSVTSEDFSAALDVLQEAHSQAIGAPKIPAVSWQ-DVGGLQQVKKEILDTIQLPLEHPEL 821
Query: 529 -SKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLH 575
S G LL GP G+GKT LA + F+ + E +I ++
Sbjct: 822 LSLGLRRSGLLLYGPPGTGKTLLAKAVATECTMTFLSVKGPE-LINMY 868
>UNIPROTKB|F1NN52 [details] [associations]
symbol:F1NN52 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:AADN02022496 EMBL:AADN02022497
EMBL:AADN02022498 EMBL:AADN02022499 IPI:IPI00588479
Ensembl:ENSGALT00000026409 Uniprot:F1NN52
Length = 1337
Score = 362 (132.5 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 95/276 (34%), Positives = 143/276 (51%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GGLS + + ++P V + I+ +G L YGPPGTGKTL+AR + +
Sbjct: 366 VGGLSDHISALKEMVVFPLLYP-EVFERFKIQPPRGCLFYGPPGTGKTLVARALANECSQ 424
Query: 281 MEPKIV----NGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICK 336
++ G + LSK+VGE+E+ +R LF DQ + S +I FDEID +
Sbjct: 425 GNRRVAFFMRKGADCLSKWVGESERQLRLLF-----DQAYQMRPS---IIFFDEIDGLAP 476
Query: 337 SRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEI 396
R S +D +H SIV+ LL +DG++ V++IG TNR D +D AL RPGR + +
Sbjct: 477 VRSSKQDQ--IHSSIVSTLLALMDGLDGRGEVVVIGATNRLDSIDPALRRPGRFDREFLF 534
Query: 397 SLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNR 456
LP++ R +I +IHT D + ELA Y GA+++ + A AL R
Sbjct: 535 GLPNKEARKEIFKIHTRDWTPKLL---DTFIDELATECVGYCGADIKSLCAEAALCALRR 591
Query: 457 ---QLSMDDLTKPVDEESIKVTMDDFLHALYEIVPA 489
Q+ + +D SIK+ DF+ A+ + VPA
Sbjct: 592 RYPQIYLSSEKLQLDVNSIKIKAKDFVMAMQKTVPA 627
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 84/237 (35%), Positives = 128/237 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + + P LGI+ KG+LL+GPPGTGKTL AR + +
Sbjct: 177 VGGCKEQIEKL-REVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 235
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF + R ++ L I FDEIDAI +R
Sbjct: 236 CFIRVI-GSELVQKYVGEGARMVRELF------EMARSKKACL--IFFDEIDAIGGARFD 286
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+ ++DG + N+ ++ TNR D LD AL+RPGRL+ +VE
Sbjct: 287 --DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFG 344
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFAL 454
LPD++GR I +IH M + D+ LA N +GAE+ V A FA+
Sbjct: 345 LPDQDGRSHIFKIHARSMS----VERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAI 397
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 88/255 (34%), Positives = 138/255 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + + P LGI+ KG+LL+GPPGTGKTL AR + +
Sbjct: 168 VGGCKEQIEKL-REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 226
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF A RT+ +I FDEIDAI +R
Sbjct: 227 CFIRVI-GSELVQKYVGEGARMVRELFEMA----RTK----KACLIFFDEIDAIGGARFD 277
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+ ++DG + N+ ++ TNR D LD AL+RPGRL+ ++E S
Sbjct: 278 --DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 335
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-- 455
LPD GR I +IH M + D+ + LA N +GAE+ V A FA+
Sbjct: 336 LPDLEGRTHIFKIHARSMS----VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 391
Query: 456 RQLSMD-DLTKPVDE 469
R+++ + D + V++
Sbjct: 392 RKIATEKDFLEAVNK 406
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 88/255 (34%), Positives = 138/255 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + + P LGI+ KG+LL+GPPGTGKTL AR + +
Sbjct: 176 VGGCKEQIEKL-REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 234
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF A RT+ +I FDEIDAI +R
Sbjct: 235 CFIRVI-GSELVQKYVGEGARMVRELFEMA----RTK----KACLIFFDEIDAIGGARFD 285
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+ ++DG + N+ ++ TNR D LD AL+RPGRL+ ++E S
Sbjct: 286 --DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 343
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-- 455
LPD GR I +IH M + D+ + LA N +GAE+ V A FA+
Sbjct: 344 LPDLEGRTHIFKIHARSMS----VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 399
Query: 456 RQLSMD-DLTKPVDE 469
R+++ + D + V++
Sbjct: 400 RKIATEKDFLEAVNK 414
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 88/255 (34%), Positives = 138/255 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + + P LGI+ KG+LL+GPPGTGKTL AR + +
Sbjct: 177 VGGCKEQIEKL-REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 235
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF A RT+ +I FDEIDAI +R
Sbjct: 236 CFIRVI-GSELVQKYVGEGARMVRELFEMA----RTK----KACLIFFDEIDAIGGARFD 286
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+ ++DG + N+ ++ TNR D LD AL+RPGRL+ ++E S
Sbjct: 287 --DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-- 455
LPD GR I +IH M + D+ + LA N +GAE+ V A FA+
Sbjct: 345 LPDLEGRTHIFKIHARSMS----VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 456 RQLSMD-DLTKPVDE 469
R+++ + D + V++
Sbjct: 401 RKIATEKDFLEAVNK 415
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 88/255 (34%), Positives = 138/255 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + + P LGI+ KG+LL+GPPGTGKTL AR + +
Sbjct: 177 VGGCKEQIEKL-REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 235
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF A RT+ +I FDEIDAI +R
Sbjct: 236 CFIRVI-GSELVQKYVGEGARMVRELFEMA----RTK----KACLIFFDEIDAIGGARFD 286
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+ ++DG + N+ ++ TNR D LD AL+RPGRL+ ++E S
Sbjct: 287 --DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-- 455
LPD GR I +IH M + D+ + LA N +GAE+ V A FA+
Sbjct: 345 LPDLEGRTHIFKIHARSMS----VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 456 RQLSMD-DLTKPVDE 469
R+++ + D + V++
Sbjct: 401 RKIATEKDFLEAVNK 415
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 88/255 (34%), Positives = 138/255 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + + P LGI+ KG+LL+GPPGTGKTL AR + +
Sbjct: 40 VGGCKEQIEKL-REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 98
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF A RT+ +I FDEIDAI +R
Sbjct: 99 CFIRVI-GSELVQKYVGEGARMVRELFEMA----RTK----KACLIFFDEIDAIGGARFD 149
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+ ++DG + N+ ++ TNR D LD AL+RPGRL+ ++E S
Sbjct: 150 --DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 207
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-- 455
LPD GR I +IH M + D+ + LA N +GAE+ V A FA+
Sbjct: 208 LPDLEGRTHIFKIHARSMS----VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 263
Query: 456 RQLSMD-DLTKPVDE 469
R+++ + D + V++
Sbjct: 264 RKIATEKDFLEAVNK 278
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 88/255 (34%), Positives = 138/255 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + + P LGI+ KG+LL+GPPGTGKTL AR + +
Sbjct: 177 VGGCKEQIEKL-REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 235
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF A RT+ +I FDEIDAI +R
Sbjct: 236 CFIRVI-GSELVQKYVGEGARMVRELFEMA----RTK----KACLIFFDEIDAIGGARFD 286
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+ ++DG + N+ ++ TNR D LD AL+RPGRL+ ++E S
Sbjct: 287 --DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-- 455
LPD GR I +IH M + D+ + LA N +GAE+ V A FA+
Sbjct: 345 LPDLEGRTHIFKIHARSMS----VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 456 RQLSMD-DLTKPVDE 469
R+++ + D + V++
Sbjct: 401 RKIATEKDFLEAVNK 415
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 88/255 (34%), Positives = 138/255 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + + P LGI+ KG+LL+GPPGTGKTL AR + +
Sbjct: 178 VGGCKEQIEKL-REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 236
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF A RT+ +I FDEIDAI +R
Sbjct: 237 CFIRVI-GSELVQKYVGEGARMVRELFEMA----RTK----KACLIFFDEIDAIGGARFD 287
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+ ++DG + N+ ++ TNR D LD AL+RPGRL+ ++E S
Sbjct: 288 --DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 345
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-- 455
LPD GR I +IH M + D+ + LA N +GAE+ V A FA+
Sbjct: 346 LPDLEGRTHIFKIHARSMS----VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 401
Query: 456 RQLSMD-DLTKPVDE 469
R+++ + D + V++
Sbjct: 402 RKIATEKDFLEAVNK 416
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 88/255 (34%), Positives = 138/255 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + + P LGI+ KG+LL+GPPGTGKTL AR + +
Sbjct: 177 VGGCKEQIEKL-REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 235
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF A RT+ +I FDEIDAI +R
Sbjct: 236 CFIRVI-GSELVQKYVGEGARMVRELFEMA----RTK----KACLIFFDEIDAIGGARFD 286
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+ ++DG + N+ ++ TNR D LD AL+RPGRL+ ++E S
Sbjct: 287 --DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-- 455
LPD GR I +IH M + D+ + LA N +GAE+ V A FA+
Sbjct: 345 LPDLEGRTHIFKIHARSMS----VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 456 RQLSMD-DLTKPVDE 469
R+++ + D + V++
Sbjct: 401 RKIATEKDFLEAVNK 415
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 88/255 (34%), Positives = 138/255 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + + P LGI+ KG+LL+GPPGTGKTL AR + +
Sbjct: 177 VGGCKEQIEKL-REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 235
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF A RT+ +I FDEIDAI +R
Sbjct: 236 CFIRVI-GSELVQKYVGEGARMVRELFEMA----RTK----KACLIFFDEIDAIGGARFD 286
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+ ++DG + N+ ++ TNR D LD AL+RPGRL+ ++E S
Sbjct: 287 --DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-- 455
LPD GR I +IH M + D+ + LA N +GAE+ V A FA+
Sbjct: 345 LPDLEGRTHIFKIHARSMS----VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 456 RQLSMD-DLTKPVDE 469
R+++ + D + V++
Sbjct: 401 RKIATEKDFLEAVNK 415
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 99/374 (26%), Positives = 181/374 (48%)
Query: 85 VSTGDHVSLNRFIPPEDFNLALLTVELEFVKKGSKNEQVDAVLLANQLRKRFINQVMTAG 144
+ST D L + + L ++ E+VK KN + + +L A + KR + + G
Sbjct: 22 LSTADEEDLYGRLKSLERQLEFTDIQEEYVKDEQKNLKRE-LLRAQEEVKRIQSVPLVIG 80
Query: 145 QRVVFEYHGNNYIFTVNGAAVEGQEKSNALERGIITNETYFVFEASNDSGIKIVNQREGA 204
Q + N + + G+ + S + R ++ +++ + ++ +
Sbjct: 81 QFMEMVDQNNGIVGSTTGSNYYVRILST-INRELLKPSASVALHRHSNALVDVLPPEADS 139
Query: 205 NSNIFRHKEF-NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPP 263
+ ++ E ++ IGG + +I R A + + ++GI +G+LLYGPP
Sbjct: 140 SISLLSQSEKPDVSYNDIGGCDIQKQEI-REAVELPLTHHELYKQIGIDPPRGVLLYGPP 198
Query: 264 GTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDL 323
GTGKT++A+ + ++V G E + K++GE + +RD+F A+ +
Sbjct: 199 GTGKTMLAKAVANHTTAAFIRVV-GSEFVQKYLGEGPRMVRDVFRLAKENAPA------- 250
Query: 324 HVIIFDEIDAICKSRGSTRDGTGVH-DSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDE 382
+I DE+DAI +R + G I+ +LL ++DG + NV +I TNR D LD
Sbjct: 251 -IIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDP 309
Query: 383 ALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAEL 442
ALLRPGRL+ ++E LPD + + Q+ T+KM L+ +V+L++ +R S AE+
Sbjct: 310 ALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMN----LSDEVDLEDYVSRPDKISAAEI 365
Query: 443 EGVAKSAVSFALNR 456
+ + A A+ +
Sbjct: 366 AAICQEAGMHAVRK 379
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 88/255 (34%), Positives = 138/255 (54%)
Query: 221 IGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNG 280
+GG + + R + + P LGI+ KG+LL+GPPGTGKTL AR + +
Sbjct: 177 VGGCKEQIEKL-REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 235
Query: 281 MEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGS 340
+++ G E++ K+VGE + +R+LF A RT+ +I FDEIDAI +R
Sbjct: 236 CFIRVI-GSELVQKYVGEGARMVRELFEMA----RTK----KACLIFFDEIDAIGGARFD 286
Query: 341 TRDGTGVHDSIVN---QLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEIS 397
DG G + + +L+ ++DG + N+ ++ TNR D LD AL+RPGRL+ ++E S
Sbjct: 287 --DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 398 LPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALN-- 455
LPD GR I +IH M + D+ + LA N +GAE+ V A FA+
Sbjct: 345 LPDLEGRTHIFKIHARSMS----VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 456 RQLSMD-DLTKPVDE 469
R+++ + D + V++
Sbjct: 401 RKIATEKDFLEAVNK 415
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 355 (130.0 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 90/294 (30%), Positives = 156/294 (53%)
Query: 184 YFVFEASNDSGIKIVNQREGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPP 243
+F+ + G +++N + + + ++ ++ ++ + G E ++ + P
Sbjct: 128 FFLLNQAQGGGSRVMNFGK-SKAKLYNDEKKKVRFRDVAGADEEKQELVE--VVEFLKDP 184
Query: 244 HVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNI 303
+++G + KG+LL GPPGTGKTL+AR + G+ ++G + + FVG +
Sbjct: 185 RKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGEA-GVPFFSISGSDFVEMFVGVGASRV 243
Query: 304 RDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDS---IVNQLLTKID 360
RDLF +A+ + +I DEIDA+ + RG+ G G HD +NQLL ++D
Sbjct: 244 RDLFENAKKNAPC--------IIFIDEIDAVGRQRGAGLGG-G-HDEREQTLNQLLVEMD 293
Query: 361 GVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSF 420
G + +++I TNR D+LD ALLRPGR + Q+ + PD NGR +L++H N
Sbjct: 294 GFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPDVNGREAVLKVHAR----NKP 349
Query: 421 LAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKV 474
L ++NL+ +A RT +SGA+LE + A A + D++ +DE + +V
Sbjct: 350 LDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDMSD-IDEATDRV 402
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 358 (131.1 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 98/277 (35%), Positives = 149/277 (53%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N+ IG L + D A + V P LG+ G+LL GPPG GKTL+A+ +
Sbjct: 576 NVTWADIGALE-DIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAV 634
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAI 334
+G+ V GPE+L+ +VGE+E+ +R +F A+N VI FDE+DA+
Sbjct: 635 ANE-SGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPC--------VIFFDEVDAL 685
Query: 335 CKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQV 394
C R S R+ TG +VNQLLT++DG+E+ V ++ TNR D++D A+LRPGRL+ +
Sbjct: 686 CPRR-SDRE-TGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTL 743
Query: 395 EISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELA--ARTKNYSGAELEGVAKSAVSF 452
+ LP R+ IL+ T K L DVNL+ +A R Y+GA+L + + A
Sbjct: 744 FVGLPPPADRVAILKTIT-KNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLC 802
Query: 453 ALNRQLSMDDLTKPVDEESIKVTMDDFLHALYEIVPA 489
AL ++++ V +KV+ F A ++ P+
Sbjct: 803 ALRQEITAQK--NGVGAGELKVSHKHFEDAFKKVKPS 837
Score = 293 (108.2 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 91/249 (36%), Positives = 131/249 (52%)
Query: 215 NLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQI 274
N++ +GG A ++ + R P V LG+ +G+LL+GPPG GKTL+A I
Sbjct: 260 NVKFEDVGGNDATLKEVCKMLIHMR--HPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAI 317
Query: 275 GKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIF-DEIDA 333
L+ K+ PE++S GE+E+ +R+LF DQ S+ I+F DEIDA
Sbjct: 318 AGELDLPILKVA-APEIVSGVSGESEQKLRELF-----DQAV----SNAPCIVFIDEIDA 367
Query: 334 ICKSRG-STRDGTGVHDSIVNQLLTKID---GVESLNNVLLIGMTNRKDMLDEALLRPGR 389
I R +++D + IV QLLT +D V + VL+IG TNR D LD AL R GR
Sbjct: 368 ITPKREVASKD---MERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGR 424
Query: 390 LEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSA 449
+ +V + +PDE R +ILQ K++ L N LA T + GA+L + + A
Sbjct: 425 FDREVCLGIPDEAARERILQTLCRKLR----LPETFNFCHLAHLTPGFVGADLMALCREA 480
Query: 450 VSFALNRQL 458
A+NR L
Sbjct: 481 AMCAVNRVL 489
Score = 80 (33.2 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 36/148 (24%), Positives = 66/148 (44%)
Query: 454 LNRQLSMDDLTKPVDEESIK---VTMDDFLHALYEIVPAF---GAST-DDLERSRLNGMV 506
L R L + P+ EE ++ + ++DF+ AL E+ P+ G T ++ + + +
Sbjct: 527 LQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALE 586
Query: 507 DCGDRHKHIYQRAMLLVEQVK-VSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKI 565
D D + +Q + + G+P LL GP G GKT LA +S F+ +
Sbjct: 587 DIRDELIMAILAPVRNPDQFRTLGLGTP-AGILLAGPPGCGKTLLAKAVANESGLNFISV 645
Query: 566 ISAESMIGLHESTKCAQIVKVFEDAYKS 593
E ++ ++ + +VF+ A S
Sbjct: 646 KGPE-LLNMYVGESERAVRQVFQRAKNS 672
WARNING: HSPs involving 456 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 744 702 0.00082 121 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 706
No. of states in DFA: 597 (63 KB)
Total size of DFA: 297 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 60.05u 0.12s 60.17t Elapsed: 00:00:03
Total cpu time: 60.15u 0.13s 60.28t Elapsed: 00:00:03
Start: Tue May 21 00:21:00 2013 End: Tue May 21 00:21:03 2013
WARNINGS ISSUED: 2