Query 004588
Match_columns 743
No_of_seqs 534 out of 3480
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 01:51:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004588.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004588hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0046 Ca2+-binding actin-bun 100.0 9E-131 2E-135 1044.5 39.0 617 6-625 1-620 (627)
2 KOG0517 Beta-spectrin [Cytoske 100.0 1.7E-52 3.6E-57 488.8 14.4 226 388-624 43-274 (2473)
3 COG5069 SAC6 Ca2+-binding acti 100.0 2.1E-49 4.5E-54 418.1 25.1 574 19-617 18-610 (612)
4 KOG0517 Beta-spectrin [Cytoske 100.0 1E-44 2.2E-49 423.9 15.1 243 104-374 29-275 (2473)
5 COG5069 SAC6 Ca2+-binding acti 100.0 8.1E-34 1.8E-38 300.3 12.2 424 118-588 4-455 (612)
6 KOG0035 Ca2+-binding actin-bun 100.0 1.6E-32 3.4E-37 315.0 11.6 460 103-622 7-522 (890)
7 KOG0046 Ca2+-binding actin-bun 100.0 1.2E-30 2.6E-35 279.5 15.7 243 100-368 349-614 (627)
8 KOG0035 Ca2+-binding actin-bun 100.0 5.8E-32 1.3E-36 310.3 3.4 225 384-624 18-251 (890)
9 KOG3631 Alpha-parvin and relat 99.7 1.6E-17 3.5E-22 165.4 11.9 237 122-371 89-364 (365)
10 PF00307 CH: Calponin homology 99.6 2.2E-15 4.8E-20 136.6 10.4 105 516-621 1-108 (108)
11 smart00033 CH Calponin homolog 99.6 2.8E-15 6.1E-20 134.6 9.3 102 124-236 1-102 (103)
12 cd00014 CH Calponin homology d 99.6 4.7E-15 1E-19 134.3 8.7 104 124-238 2-106 (107)
13 smart00033 CH Calponin homolog 99.6 4E-15 8.7E-20 133.6 7.7 98 395-495 2-102 (103)
14 KOG3631 Alpha-parvin and relat 99.5 4.2E-14 9E-19 141.3 11.6 218 395-621 92-363 (365)
15 PF00307 CH: Calponin homology 99.5 1.4E-14 3E-19 131.3 7.3 101 270-370 1-108 (108)
16 cd00014 CH Calponin homology d 99.5 2E-14 4.3E-19 130.1 7.5 101 394-497 2-106 (107)
17 COG5126 FRQ1 Ca2+-binding prot 99.2 1.1E-10 2.4E-15 111.9 10.8 112 15-130 11-135 (160)
18 KOG0027 Calmodulin and related 99.2 1.5E-10 3.2E-15 111.9 11.0 109 18-129 2-127 (151)
19 KOG0030 Myosin essential light 99.1 1.6E-10 3.4E-15 105.9 8.3 109 18-129 5-130 (152)
20 KOG0031 Myosin regulatory ligh 99.1 4.1E-10 8.9E-15 104.8 10.0 107 14-127 22-141 (171)
21 cd05022 S-100A13 S-100A13: S-1 99.0 9E-10 2E-14 96.2 8.1 69 21-91 5-76 (89)
22 KOG0028 Ca2+-binding protein ( 99.0 1.9E-09 4.2E-14 101.2 9.7 112 15-129 24-148 (172)
23 COG5126 FRQ1 Ca2+-binding prot 98.9 1.5E-09 3.3E-14 104.1 7.5 66 22-90 90-156 (160)
24 cd05027 S-100B S-100B: S-100B 98.9 3.4E-09 7.3E-14 92.6 9.1 67 22-91 6-80 (88)
25 smart00027 EH Eps15 homology d 98.9 4.3E-09 9.2E-14 93.7 9.2 72 17-93 3-75 (96)
26 PF13499 EF-hand_7: EF-hand do 98.9 5E-09 1.1E-13 86.2 7.4 61 25-88 1-66 (66)
27 KOG0027 Calmodulin and related 98.9 3.7E-09 7.9E-14 102.2 7.2 65 23-90 84-149 (151)
28 PF11971 CAMSAP_CH: CAMSAP CH 98.9 1.2E-09 2.6E-14 94.3 3.1 78 522-602 1-82 (85)
29 cd05029 S-100A6 S-100A6: S-100 98.8 1.7E-08 3.7E-13 88.2 9.5 71 21-91 7-80 (88)
30 KOG0028 Ca2+-binding protein ( 98.8 8E-09 1.7E-13 97.1 7.2 66 22-90 104-170 (172)
31 cd05026 S-100Z S-100Z: S-100Z 98.8 2.2E-08 4.7E-13 88.6 9.1 67 23-91 9-82 (93)
32 KOG2046 Calponin [Cytoskeleton 98.8 2.7E-08 5.8E-13 97.1 10.1 110 99-224 4-114 (193)
33 cd05031 S-100A10_like S-100A10 98.7 3.8E-08 8.2E-13 87.2 8.8 70 22-91 6-80 (94)
34 cd05025 S-100A1 S-100A1: S-100 98.7 5.9E-08 1.3E-12 85.6 9.1 67 23-91 8-81 (92)
35 PTZ00184 calmodulin; Provision 98.7 1.2E-07 2.6E-12 90.2 10.1 99 15-116 2-113 (149)
36 PTZ00183 centrin; Provisional 98.6 2.2E-07 4.7E-12 89.7 11.3 74 15-91 8-82 (158)
37 cd00213 S-100 S-100: S-100 dom 98.6 1.6E-07 3.5E-12 82.0 8.0 70 20-91 4-80 (88)
38 cd05023 S-100A11 S-100A11: S-1 98.6 2.4E-07 5.2E-12 81.1 8.8 69 21-91 6-81 (89)
39 cd00052 EH Eps15 homology doma 98.6 1.5E-07 3.3E-12 77.2 6.9 62 26-92 1-63 (67)
40 PF14658 EF-hand_9: EF-hand do 98.5 3.1E-07 6.7E-12 74.6 6.7 61 28-91 2-65 (66)
41 PF13833 EF-hand_8: EF-hand do 98.5 4.1E-07 9E-12 71.7 7.0 52 36-90 1-53 (54)
42 KOG0041 Predicted Ca2+-binding 98.5 6.7E-07 1.5E-11 86.9 9.2 79 17-98 92-171 (244)
43 PF11971 CAMSAP_CH: CAMSAP CH 98.4 5.5E-08 1.2E-12 83.9 1.1 67 286-352 9-83 (85)
44 cd05030 calgranulins Calgranul 98.4 1.1E-06 2.4E-11 76.8 7.4 68 22-91 6-80 (88)
45 KOG0518 Actin-binding cytoskel 98.3 6.7E-09 1.4E-13 121.3 -11.3 194 151-364 45-246 (1113)
46 cd00051 EFh EF-hand, calcium b 98.2 3E-06 6.6E-11 67.1 6.6 60 26-88 2-62 (63)
47 KOG0030 Myosin essential light 98.2 2.1E-06 4.6E-11 79.1 6.2 69 17-89 81-150 (152)
48 PLN02964 phosphatidylserine de 98.2 4.5E-06 9.7E-11 97.0 8.6 93 16-115 135-243 (644)
49 KOG0031 Myosin regulatory ligh 98.1 5.5E-06 1.2E-10 77.7 7.0 64 23-89 100-164 (171)
50 KOG0036 Predicted mitochondria 98.1 1.7E-05 3.6E-10 85.4 11.5 114 18-134 8-129 (463)
51 PTZ00183 centrin; Provisional 98.1 8.4E-06 1.8E-10 78.5 7.6 64 24-90 90-154 (158)
52 KOG0518 Actin-binding cytoskel 98.1 1.3E-08 2.8E-13 118.9 -14.2 206 396-615 31-246 (1113)
53 PTZ00184 calmodulin; Provision 98.0 1.2E-05 2.6E-10 76.3 7.8 63 24-89 84-147 (149)
54 COG5199 SCP1 Calponin [Cytoske 98.0 8.6E-06 1.9E-10 75.5 6.0 107 117-237 7-115 (178)
55 KOG0034 Ca2+/calmodulin-depend 98.0 1.5E-05 3.3E-10 79.2 7.6 66 24-91 104-176 (187)
56 KOG2046 Calponin [Cytoskeleton 98.0 2.5E-05 5.4E-10 76.6 8.1 86 394-483 26-114 (193)
57 KOG0037 Ca2+-binding protein, 97.9 3.9E-05 8.5E-10 76.4 7.9 78 23-103 123-208 (221)
58 cd00252 SPARC_EC SPARC_EC; ext 97.8 5.4E-05 1.2E-09 69.6 7.5 62 20-88 44-106 (116)
59 KOG0037 Ca2+-binding protein, 97.8 0.00015 3.1E-09 72.4 10.0 102 23-126 56-163 (221)
60 cd05024 S-100A10 S-100A10: A s 97.7 9.1E-05 2E-09 64.6 7.2 68 22-91 6-77 (91)
61 PF12763 EF-hand_4: Cytoskelet 97.6 0.00015 3.3E-09 65.3 6.2 70 17-91 3-72 (104)
62 PLN02964 phosphatidylserine de 97.6 0.00021 4.6E-09 83.4 9.1 72 18-92 173-245 (644)
63 PF00036 EF-hand_1: EF hand; 97.5 9.2E-05 2E-09 50.6 3.5 25 26-50 2-27 (29)
64 KOG0038 Ca2+-binding kinase in 97.4 0.0002 4.3E-09 66.6 5.4 65 25-91 109-178 (189)
65 PF00036 EF-hand_1: EF hand; 97.4 0.00022 4.8E-09 48.7 3.7 29 63-91 1-29 (29)
66 PF06294 DUF1042: Domain of Un 97.3 0.00022 4.9E-09 69.2 4.6 97 399-497 2-99 (158)
67 COG5199 SCP1 Calponin [Cytoske 97.3 0.00049 1.1E-08 64.1 6.2 100 393-497 13-116 (178)
68 PF13405 EF-hand_6: EF-hand do 97.3 0.00035 7.7E-09 48.4 3.9 27 25-51 1-28 (31)
69 PF06294 DUF1042: Domain of Un 97.3 0.00021 4.5E-09 69.4 3.5 99 519-624 1-103 (158)
70 KOG2996 Rho guanine nucleotide 97.3 0.00057 1.2E-08 76.1 7.1 73 151-223 29-103 (865)
71 KOG0034 Ca2+/calmodulin-depend 97.2 0.0019 4.1E-08 64.4 9.3 108 16-130 25-150 (187)
72 KOG0040 Ca2+-binding actin-bun 97.1 0.0031 6.7E-08 76.8 11.6 113 17-139 2246-2378(2399)
73 KOG0377 Protein serine/threoni 97.0 0.0016 3.6E-08 70.5 7.6 67 25-91 548-616 (631)
74 KOG0036 Predicted mitochondria 97.0 0.0014 3E-08 70.9 7.0 66 23-91 81-147 (463)
75 KOG0532 Leucine-rich repeat (L 96.7 0.0021 4.6E-08 72.5 5.2 86 127-223 580-668 (722)
76 PF13202 EF-hand_5: EF hand; P 96.5 0.0034 7.3E-08 41.3 3.4 24 26-49 1-25 (25)
77 KOG0044 Ca2+ sensor (EF-Hand s 96.5 0.004 8.6E-08 62.3 5.4 91 17-111 22-124 (193)
78 KOG0044 Ca2+ sensor (EF-Hand s 96.5 0.013 2.8E-07 58.6 8.9 69 23-94 63-132 (193)
79 KOG0516 Dystonin, GAS (Growth- 96.3 0.0018 3.9E-08 81.4 2.4 110 391-503 72-188 (1047)
80 PF14788 EF-hand_10: EF hand; 96.2 0.014 3.1E-07 45.1 5.9 50 39-91 1-50 (51)
81 PRK12309 transaldolase/EF-hand 96.1 0.0095 2.1E-07 66.2 6.5 52 24-91 334-386 (391)
82 KOG4223 Reticulocalbin, calume 95.8 0.031 6.8E-07 59.2 8.3 90 23-114 162-268 (325)
83 KOG0042 Glycerol-3-phosphate d 95.7 0.016 3.4E-07 65.3 5.7 83 11-96 580-663 (680)
84 KOG0516 Dystonin, GAS (Growth- 95.6 0.0045 9.7E-08 77.9 1.2 112 121-242 72-185 (1047)
85 KOG4065 Uncharacterized conser 95.6 0.033 7.3E-07 50.0 6.3 70 16-87 61-142 (144)
86 PF13202 EF-hand_5: EF hand; P 95.6 0.015 3.2E-07 38.3 3.1 25 64-88 1-25 (25)
87 KOG4251 Calcium binding protei 95.5 0.018 3.9E-07 58.2 4.7 69 23-93 100-171 (362)
88 PF13405 EF-hand_6: EF-hand do 94.2 0.064 1.4E-06 37.0 3.5 27 63-89 1-27 (31)
89 KOG2996 Rho guanine nucleotide 94.1 0.081 1.8E-06 59.6 5.9 73 396-468 5-88 (865)
90 PF10591 SPARC_Ca_bdg: Secrete 93.8 0.047 1E-06 50.1 2.9 60 22-86 52-112 (113)
91 PF09279 EF-hand_like: Phospho 93.8 0.13 2.8E-06 44.2 5.4 64 25-90 1-69 (83)
92 KOG0532 Leucine-rich repeat (L 93.4 0.077 1.7E-06 60.3 4.2 84 399-482 582-668 (722)
93 KOG3000 Microtubule-binding pr 93.4 0.71 1.5E-05 49.1 11.1 103 512-622 13-120 (295)
94 smart00054 EFh EF-hand, calciu 93.0 0.1 2.2E-06 33.7 2.8 25 26-50 2-27 (29)
95 smart00054 EFh EF-hand, calciu 92.9 0.12 2.6E-06 33.3 3.0 28 63-90 1-28 (29)
96 KOG2128 Ras GTPase-activating 92.5 0.18 4E-06 62.4 5.9 84 129-224 48-132 (1401)
97 KOG2643 Ca2+ binding protein, 92.3 0.075 1.6E-06 58.3 2.0 71 24-94 233-318 (489)
98 KOG4223 Reticulocalbin, calume 91.8 0.25 5.5E-06 52.5 5.3 68 22-92 75-143 (325)
99 KOG2562 Protein phosphatase 2 90.1 0.48 1E-05 52.7 5.6 89 18-112 272-376 (493)
100 PF05517 p25-alpha: p25-alpha 89.1 1.4 3E-05 42.8 7.4 68 26-93 1-72 (154)
101 PF13833 EF-hand_8: EF-hand do 89.0 0.52 1.1E-05 36.6 3.7 30 18-50 22-52 (54)
102 KOG1955 Ral-GTPase effector RA 88.6 0.93 2E-05 50.5 6.4 75 17-96 224-299 (737)
103 KOG2243 Ca2+ release channel ( 84.0 1.4 2.9E-05 54.1 5.0 58 29-90 4062-4120(5019)
104 COG5261 IQG1 Protein involved 82.2 1.8 3.9E-05 51.4 5.0 90 130-234 51-141 (1054)
105 PF13499 EF-hand_7: EF-hand do 81.4 2.4 5.2E-05 34.2 4.3 30 20-49 35-66 (66)
106 KOG2643 Ca2+ binding protein, 80.6 1.4 3.1E-05 48.7 3.3 60 37-98 402-461 (489)
107 KOG0377 Protein serine/threoni 80.2 4.3 9.4E-05 44.9 6.8 28 24-51 464-492 (631)
108 KOG4666 Predicted phosphate ac 79.7 2 4.2E-05 45.8 3.8 61 25-89 297-358 (412)
109 KOG4251 Calcium binding protei 76.6 4.7 0.0001 41.3 5.4 61 25-88 282-343 (362)
110 KOG3000 Microtubule-binding pr 74.0 5.5 0.00012 42.5 5.4 88 270-363 17-109 (295)
111 PF05622 HOOK: HOOK protein; 72.6 4.5 9.8E-05 49.1 5.0 70 395-465 9-81 (713)
112 cd00252 SPARC_EC SPARC_EC; ext 70.8 5.5 0.00012 36.7 4.0 25 26-50 82-107 (116)
113 KOG3866 DNA-binding protein of 70.3 3.1 6.8E-05 43.9 2.5 95 27-134 247-357 (442)
114 KOG1029 Endocytic adaptor prot 67.9 6.5 0.00014 46.4 4.6 62 22-88 193-255 (1118)
115 PF08726 EFhand_Ca_insen: Ca2+ 65.8 2.8 6.1E-05 34.9 0.9 53 24-86 6-65 (69)
116 PF07462 MSP1_C: Merozoite sur 64.5 41 0.00088 38.7 9.8 39 574-621 182-224 (574)
117 cd00051 EFh EF-hand, calcium b 64.2 7.9 0.00017 29.4 3.3 29 64-92 2-30 (63)
118 KOG0751 Mitochondrial aspartat 64.2 7.2 0.00016 43.9 3.9 84 25-111 109-203 (694)
119 cd05022 S-100A13 S-100A13: S-1 64.2 7.7 0.00017 33.9 3.4 28 24-51 47-75 (89)
120 cd05026 S-100Z S-100Z: S-100Z 61.8 8.9 0.00019 33.7 3.4 28 24-51 53-81 (93)
121 PF05622 HOOK: HOOK protein; 58.6 15 0.00032 44.7 5.7 71 124-206 8-81 (713)
122 cd05031 S-100A10_like S-100A10 58.0 6.2 0.00013 34.6 1.7 27 24-50 51-78 (94)
123 PRK14954 DNA polymerase III su 56.8 60 0.0013 38.8 10.1 25 698-722 451-475 (620)
124 KOG0169 Phosphoinositide-speci 56.5 21 0.00046 42.5 6.1 72 20-94 132-204 (746)
125 KOG0038 Ca2+-binding kinase in 56.3 18 0.0004 34.3 4.5 61 31-95 78-141 (189)
126 cd05029 S-100A6 S-100A6: S-100 56.2 13 0.00028 32.4 3.4 32 17-51 47-79 (88)
127 PF09069 EF-hand_3: EF-hand; 56.2 66 0.0014 28.3 7.7 64 24-89 3-74 (90)
128 cd05030 calgranulins Calgranul 55.4 12 0.00027 32.4 3.2 27 24-50 51-78 (88)
129 cd05023 S-100A11 S-100A11: S-1 54.8 14 0.00029 32.3 3.3 28 24-51 52-80 (89)
130 cd00052 EH Eps15 homology doma 52.8 15 0.00034 29.1 3.2 27 24-50 33-60 (67)
131 KOG2128 Ras GTPase-activating 51.4 24 0.00051 44.8 5.7 81 399-482 48-131 (1401)
132 KOG2871 Uncharacterized conser 50.3 8.4 0.00018 41.9 1.5 84 11-99 298-383 (449)
133 COG5261 IQG1 Protein involved 49.8 16 0.00035 43.8 3.8 96 274-374 50-155 (1054)
134 PRK12309 transaldolase/EF-hand 48.5 40 0.00086 37.9 6.5 58 55-114 327-384 (391)
135 PF14788 EF-hand_10: EF hand; 48.1 32 0.0007 26.8 4.0 27 24-50 21-48 (51)
136 KOG1029 Endocytic adaptor prot 47.6 77 0.0017 38.0 8.6 67 18-89 10-76 (1118)
137 cd05025 S-100A1 S-100A1: S-100 46.5 21 0.00046 31.0 3.3 28 24-51 52-80 (92)
138 KOG2562 Protein phosphatase 2 45.3 32 0.0007 38.7 5.0 63 24-86 351-420 (493)
139 smart00027 EH Eps15 homology d 45.2 28 0.0006 30.5 3.8 29 62-90 10-38 (96)
140 KOG1924 RhoA GTPase effector D 42.2 1.2E+02 0.0026 36.6 9.0 8 399-406 309-316 (1102)
141 cd00213 S-100 S-100: S-100 dom 42.0 34 0.00073 29.3 3.8 29 62-90 8-38 (88)
142 PF12763 EF-hand_4: Cytoskelet 40.9 34 0.00074 30.9 3.7 36 12-50 34-70 (104)
143 KOG0041 Predicted Ca2+-binding 40.6 32 0.00068 34.6 3.7 36 59-94 93-131 (244)
144 PF08976 DUF1880: Domain of un 40.0 17 0.00037 33.2 1.6 32 58-89 3-34 (118)
145 KOG1924 RhoA GTPase effector D 39.4 1.1E+02 0.0024 36.8 8.3 7 550-556 456-462 (1102)
146 cd05027 S-100B S-100B: S-100B 38.0 35 0.00075 29.7 3.2 27 24-50 51-78 (88)
147 PF06395 CDC24: CDC24 Calponin 37.6 42 0.00092 29.4 3.6 66 536-604 3-73 (89)
148 cd08540 SAM_PNT-ERG Sterile al 36.6 35 0.00076 28.9 2.9 36 515-554 9-46 (75)
149 PRK12270 kgd alpha-ketoglutara 36.5 2.1E+02 0.0047 35.8 10.3 12 612-623 10-21 (1228)
150 KOG1707 Predicted Ras related/ 35.2 95 0.0021 36.3 6.9 80 16-97 187-272 (625)
151 PF06395 CDC24: CDC24 Calponin 33.7 93 0.002 27.3 5.1 61 295-356 8-76 (89)
152 PF05042 Caleosin: Caleosin re 33.4 1.4E+02 0.0029 29.6 6.7 34 23-59 6-40 (174)
153 KOG1707 Predicted Ras related/ 33.3 45 0.00097 38.9 3.9 70 10-88 301-375 (625)
154 cd08541 SAM_PNT-FLI-1 Sterile 32.9 45 0.00097 29.4 3.0 36 515-554 21-58 (91)
155 cd05024 S-100A10 S-100A10: A s 32.6 46 0.001 29.3 3.1 28 24-51 48-76 (91)
156 PLN02952 phosphoinositide phos 31.6 1.4E+02 0.0029 35.6 7.6 64 24-89 38-109 (599)
157 TIGR02675 tape_meas_nterm tape 30.2 1.2E+02 0.0026 25.6 5.1 60 16-84 8-75 (75)
158 PLN02222 phosphoinositide phos 30.2 1.2E+02 0.0026 35.8 6.9 63 25-90 26-90 (581)
159 PF05086 Dicty_REP: Dictyostel 29.3 97 0.0021 37.2 5.7 14 685-698 289-302 (911)
160 KOG4578 Uncharacterized conser 29.3 44 0.00095 36.0 2.8 68 21-90 330-398 (421)
161 KOG0751 Mitochondrial aspartat 28.4 1.6E+02 0.0035 33.6 7.0 66 20-87 32-99 (694)
162 KOG0998 Synaptic vesicle prote 28.0 34 0.00074 42.3 2.1 72 17-93 276-348 (847)
163 PF07499 RuvA_C: RuvA, C-termi 27.9 1.2E+02 0.0027 22.9 4.4 41 43-90 4-44 (47)
164 KOG4666 Predicted phosphate ac 27.9 1.5E+02 0.0033 32.1 6.4 88 24-114 259-358 (412)
165 KOG3449 60S acidic ribosomal p 27.5 2.2E+02 0.0047 26.0 6.4 53 26-86 3-56 (112)
166 PF14658 EF-hand_9: EF-hand do 27.3 83 0.0018 26.0 3.5 27 25-51 36-64 (66)
167 PLN02228 Phosphoinositide phos 26.5 1.8E+02 0.0039 34.3 7.4 64 24-90 24-92 (567)
168 PF00046 Homeobox: Homeobox do 24.3 2.3E+02 0.0051 21.7 5.6 46 16-70 5-50 (57)
169 PF07462 MSP1_C: Merozoite sur 23.8 1.5E+02 0.0033 34.2 5.9 29 517-545 151-180 (574)
170 KOG0705 GTPase-activating prot 23.5 1.5E+02 0.0033 34.6 5.8 58 608-665 331-391 (749)
171 cd00086 homeodomain Homeodomai 23.4 2.5E+02 0.0055 21.4 5.7 46 16-70 5-50 (59)
172 cd07313 terB_like_2 tellurium 23.3 91 0.002 27.5 3.4 54 36-90 12-65 (104)
173 PHA03247 large tegument protei 23.3 6.1E+02 0.013 35.4 11.6 29 594-622 2518-2546(3151)
174 PF03672 UPF0154: Uncharacteri 22.9 1.2E+02 0.0026 24.9 3.6 34 36-72 28-61 (64)
175 cd08536 SAM_PNT-Mae Sterile al 20.8 1.1E+02 0.0023 25.3 3.0 35 515-553 6-41 (66)
176 PLN02223 phosphoinositide phos 20.3 2.5E+02 0.0054 32.9 6.9 65 24-90 16-92 (537)
177 cd08537 SAM_PNT-ESE-1-like Ste 20.3 79 0.0017 27.0 2.1 38 515-553 14-51 (78)
No 1
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=100.00 E-value=8.9e-131 Score=1044.49 Aligned_cols=617 Identities=62% Similarity=0.997 Sum_probs=597.2
Q ss_pred cccccchHhhhcCCHHHHHHHHHHhHhhhCCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHH
Q 004588 6 GVLVSDQWLQSQFTQVELRSLKSKFVSIKNQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFL 85 (743)
Q Consensus 6 ~~~~s~~~l~~~~t~~e~~~l~~~F~~~D~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl 85 (743)
||+|||||+++|||++|+++++++|..+|+++|+|+..|+..+|.+++.....+.++|+++++.+.+.|.+|+|+||+|+
T Consensus 1 ~~~v~~~~~~~~~tq~El~~l~~kF~~~d~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~ 80 (627)
T KOG0046|consen 1 GVLVSDPWLQSQLTQEELRELKEKFNKLDDQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFV 80 (627)
T ss_pred CccccchhhcccccHHHHHHHHHHHHhhcCCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHH
Confidence 79999999999999999999999999999999999999999999976544456789999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCC-CCCcchHHHHhhhcccccccchhhhhHHHHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHH
Q 004588 86 RAYINLQGRATTKPG-SAKNSSSFLKASTTTLLHTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVL 164 (743)
Q Consensus 86 ~~~~~~~~~~~~~~g-~~~~s~~~lk~~~~~~~~~~~~~e~~~f~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~ 164 (743)
+++.++++++.++.| +++.++++++.++++.+|+|.++||.+|++|||++|+.+|+|++++|+++..++||+.++||++
T Consensus 81 ~~~~~l~s~~~~k~~~g~~~~~~~~~~sst~~~Hti~eeEk~~fv~hIN~~L~~Dpdl~~~lPinp~t~~lf~~vkDGvl 160 (627)
T KOG0046|consen 81 GIFLNLKSKDIAKIGEGIKAASGTLKGSSTGTQHTINEEEKRAFVNHINSYLEGDPDLKHLLPINPNTNDLFDLVKDGVL 160 (627)
T ss_pred HHHHhhhhhhhhhhcCCcccccceeecccccceeeecHHHHHHHHHHHHHHhcCCcchhhcCCCCCchHHHHHHhcccee
Confidence 999999999888876 7889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCccccccccCCCCChhHHHHHHHHHHHHHHHcCCeeeecCccccccCchhhHhhhhhhhhhhhhhhccc
Q 004588 165 LCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLILGLISQIIKIQLLADLN 244 (743)
Q Consensus 165 L~~Lle~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L~~~k~~G~~l~~i~~~DIvdG~~~liLgLiW~LI~~~~l~~i~ 244 (743)
||||||...|+|||+|+||.++.+++|++.||+++||+.++++||.+|||+++||.+|++++|||||||||+++++++++
T Consensus 161 LcKlIN~svPdTIDERaiN~kk~Lnp~~~~EN~~l~lnSAkAiGc~VvNIga~Dl~eGrphLVLGLiwQiIkiglladi~ 240 (627)
T KOG0046|consen 161 LCKLINLSVPDTIDERAINTKKKLNPFERNENLNLALNSAKAIGCTVVNIGAQDLAEGRPHLVLGLIWQIIKIGLLADIN 240 (627)
T ss_pred eehhhcccCCCchhhhhhccCCcCChhhhccchhhHHhhcccccceEEecCchhhhcCCceeeHHHHHHHHHHHHhhhcc
Confidence 99999999999999999998888999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcchhhcccCCchhHHhhcCChHHHHHHHHHHHhhhcCCCcccccCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCC
Q 004588 245 LKKTPQLVELVEDNSDVEELMGLAPEKVLLKWMNYHLKKAGYEKPVTNFSSDLKDGKAYTYLLNVLAPEHCNPATLDMKD 324 (743)
Q Consensus 245 ~~~~p~~~~~~~~~e~~~~~~~~s~e~~LL~Wvn~~L~~~~~~~~V~nFssd~~DG~al~~Ll~~~~P~~~~~~~l~~~~ 324 (743)
++++|++.++++++|+++++++++||++||||+|+||+++|+.+.++||++|++||.+|.+|++.+.|+.++...+...+
T Consensus 241 l~~~p~L~~Ll~d~e~lEelm~L~PEkiLLrW~N~HL~kag~~k~~~nFs~DikD~eaY~~LLnqlap~~~~~~~l~~~d 320 (627)
T KOG0046|consen 241 LKKNPQLVRLLEDGETLEELMRLPPEKILLRWMNYHLKKAGWKKTVTNFSSDIKDSEAYTHLLNQLAPEHCSPAPLQETD 320 (627)
T ss_pred cccCHHHHHHHhCCccHHHHhcCCHHHHHHHHHHHHHHhcccceehhhhhhhhccHHHHHHHHHHhccccCCccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhcCCccccCcccccccCccchHHhHhhhhhhcCCCCccccchhhhhhchhhhhhhhhhHHHHHHHHh
Q 004588 325 PTERAKLVLDHAERMDCKRYLSPKDIVEGSANLNLAFVAQVFHQRSGLTTDSKKISFAEMITDDVQTSREERCFRLWINS 404 (743)
Q Consensus 325 ~~~n~~~a~~~ae~lgi~~~l~peDi~~~~~d~~l~yls~l~~~~~~~~~~~~~~~~~~~~~~d~~~~~q~~~f~~WiN~ 404 (743)
..+|++.+++.|+++||.++++|.|++.|+++++++||+++|+++||++.+.+.. ..+++.+++.+++++|+|+.|+|+
T Consensus 321 ~l~RA~~vLq~Aekl~Cr~~ltp~dvV~G~~kLNLAFVA~lFn~~pgL~~~~~~~-~~e~~~~~~~~~reer~fr~WmNS 399 (627)
T KOG0046|consen 321 DLERAELVLQQAEKLDCRRYLTPTDVVAGNPKLNLAFVANLFNTHPGLEKPENEE-IAEMMTEDEEESREERTFRLWMNS 399 (627)
T ss_pred hHhHHHHHHHHHHhcCCccccCHHHHhcCCchhhHHHHHHhcccCCCCCCccccc-hhcccchhHhHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999887543 378888999999999999999999
Q ss_pred hcCCccccchhHhhhhHHHHHHHHHHhCCCCccccccCCC--CCCChhHHHHHHHHHHHHHHhhhccccCCCCcccccCh
Q 004588 405 LGIATYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQASKP--PIKMPFRKVENCNQVIKIGKQLKFSLVNVAGNDFVQGN 482 (743)
Q Consensus 405 ~~~~~~v~dl~~Dl~DG~~L~~Lle~ls~~~v~~k~~~~~--~~~~~~~~ieN~~~~l~~~k~~g~~l~nI~~~DIvdG~ 482 (743)
++..++|+++|+|++||++|++++++++|+.++|++.+|| +.++.++++||||+|++.+|++++++|||.+.||+|||
T Consensus 400 lgv~p~vn~~f~Dl~dglVllq~~dki~pg~Vnwk~vnKp~~~~~~~~kklENcNyav~lGk~~~FSLVgi~G~DI~dGN 479 (627)
T KOG0046|consen 400 LGVNPYVNNLFEDLRDGLVLLQLYDKVSPGSVNWKHVNKPPSPLKMPFKKVENCNYAVKLGKQLKFSLVGIAGQDIVDGN 479 (627)
T ss_pred cCCcHHHHHHHHhhhhhhHHHHHHHHccCCccchhhccCCCCcccccHHHhhcchHHHHHHhhcceeeeccccccccccc
Confidence 9999999999999999999999999999999999999999 66778999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhcccCCCcccChhHHHHHHhHHhhccCCccccccCCCCCCCChHHHHHHhhhcCCCce
Q 004588 483 KKLILAFLWQLMRFNMLQLLKNLRSRSQGKEITDAGILKWANDKVKSTGRTSQMESFKDKSLSNGLFFLELLSSVEPRVV 562 (743)
Q Consensus 483 ~kliL~LlW~Li~~~i~~~~~~l~~~~~g~~~~~~~LL~W~~~~~~~~~~~~~i~nfsd~s~~dG~a~~aLl~~~~P~~i 562 (743)
+++||||+|||||+|+++++..++.+ |+.+++++++.|+|++++..|+..+|.+|.|++.+||++|+.||+++.|+.|
T Consensus 480 k~LtLAlvWQLMR~ytL~vL~~l~~~--~~~~tD~dIv~WaN~klk~~Gk~s~IrSFkD~siS~g~~vLDLidaI~P~~V 557 (627)
T KOG0046|consen 480 KTLTLALVWQLMRRYTLQVLKSLRSG--GKDITDSDIVNWANRKLKKAGKKSQIRSFKDKSISDGLFVLDLLDAIKPGVV 557 (627)
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHhhc--CCCCcHHHHHHHHHHHHHhcCCccccccccCcccccCcchHHHHhhcCcCcc
Confidence 99999999999999999999998865 5588999999999999999999999999999999999999999999999999
Q ss_pred ecccccCCCChHHHHHhHHHHHHHHHHcCCCcccCcchhccCCchHHHHHHHHHHHHhhcCCc
Q 004588 563 NWNLVTKGESDEEKRLNATYIISVARKLGCSIFLLPEDIMEVNQKMILTLTASIMYWSLQQQV 625 (743)
Q Consensus 563 ~~~~l~~~~~~~~~~~n~~~a~~~A~~lGi~~ll~peDi~~~d~k~iltyls~~~~~~~~~~~ 625 (743)
||+.++.+++++++..|++||+++||++|+..++.||||+++.+|||||+.+++|.+.+.+..
T Consensus 558 n~~LV~~G~t~EdK~~NAkYaIS~ARKiGa~IyaLPEDIvEV~pKMvltvfA~lM~~~~~~~~ 620 (627)
T KOG0046|consen 558 NYSLVTSGNTDEEKLLNAKYAISVARKLGASIYALPEDIVEVNPKMVLTVFASLMAWSLQRQS 620 (627)
T ss_pred chhhccCCCChhhhhhcchhhHhHHHhhCceEEeccHHHhhhchhhhHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999998875
No 2
>KOG0517 consensus Beta-spectrin [Cytoskeleton]
Probab=100.00 E-value=1.7e-52 Score=488.80 Aligned_cols=226 Identities=23% Similarity=0.448 Sum_probs=204.6
Q ss_pred hhhhhhhhHHHHHHHHhhcC--CccccchhHhhhhHHHHHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHHHHHh
Q 004588 388 DVQTSREERCFRLWINSLGI--ATYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQASKPPIKMPFRKVENCNQVIKIGKQ 465 (743)
Q Consensus 388 d~~~~~q~~~f~~WiN~~~~--~~~v~dl~~Dl~DG~~L~~Lle~ls~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~ 465 (743)
|+.+.+|+||||+|||+|+. .+.|.|||+||+||+.|++|+|+|||..++ ...+|+||+|++||++.||.|+|.
T Consensus 43 dERe~vQKKTFTKWvNShL~rv~c~I~DLy~DlrDG~~LlkLLEvlSGE~Lp----kPtrGRMRIH~LENvdKaLqFLke 118 (2473)
T KOG0517|consen 43 DEREAVQKKTFTKWVNSHLARVSCRIGDLYTDLRDGIMLLKLLEVLSGERLP----KPTRGRMRIHCLENVDKALQFLKE 118 (2473)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhcchhHHHHHHHhhhHHHHHHHHHHccccCC----CCCCCceeehhHhhhHHHHHHHHh
Confidence 57899999999999999974 588999999999999999999999999884 123779999999999999999999
Q ss_pred hhccccCCCCcccccChhHHHHHHHHHH-HHHHHHhhhhhhcccCCCcccChhHHHHHHhHHhhccCCccccccCCCCCC
Q 004588 466 LKFSLVNVAGNDFVQGNKKLILAFLWQL-MRFNMLQLLKNLRSRSQGKEITDAGILKWANDKVKSTGRTSQMESFKDKSL 544 (743)
Q Consensus 466 ~g~~l~nI~~~DIvdG~~kliL~LlW~L-i~~~i~~~~~~l~~~~~g~~~~~~~LL~W~~~~~~~~~~~~~i~nfsd~s~ 544 (743)
.+|.+.||+++||||||.++||||||+| +||||.+|.-+-- ....+..++++||-|||.+|.+| ++|.|+||| +||
T Consensus 119 qkVhLEniGshDIVDGN~rL~LGLIWTIILRFQIq~I~ie~e-dn~E~rSAKDALLLWCQmKTAGY-pnVNI~nFT-tSW 195 (2473)
T KOG0517|consen 119 QKVHLENIGSHDIVDGNHRLILGLIWTIILRFQIQDISIETE-DNRETRSAKDALLLWCQMKTAGY-PNVNITNFT-TSW 195 (2473)
T ss_pred cccccccCCcccccCCcchhhHHHHHHHHHheeeeeeEeecc-cchhhhhHHHHHHHHHHhhccCC-CCcccccCc-cch
Confidence 9999999999999999999999999999 6999988754311 01123457899999999999999 799999999 999
Q ss_pred CChHHHHHHhhhcCCCceecccccCCCChHHHHHhHHHHHHHHH-HcCCCcccCcchhc--cCCchHHHHHHHHHHHHhh
Q 004588 545 SNGLFFLELLSSVEPRVVNWNLVTKGESDEEKRLNATYIISVAR-KLGCSIFLLPEDIM--EVNQKMILTLTASIMYWSL 621 (743)
Q Consensus 545 ~dG~a~~aLl~~~~P~~i~~~~l~~~~~~~~~~~n~~~a~~~A~-~lGi~~ll~peDi~--~~d~k~iltyls~~~~~~~ 621 (743)
+||+||.||||++|||+|||+.+.+ .+...|++.||++|+ +|||+++|+||||. .||+|||||||+.|||+|.
T Consensus 196 RdGLaFNALIHkHRPDLvDf~~L~k----~na~~NL~~AFdvAE~~LGia~LLDpEDV~v~~PDEKSIITYV~~YYHyFs 271 (2473)
T KOG0517|consen 196 RDGLAFNALIHKHRPDLVDFDKLKK----SNALYNLQHAFDVAEQELGIAKLLDPEDVNVEQPDEKSIITYVVTYYHYFS 271 (2473)
T ss_pred hcchhHHHHHHhcCcchhhhcccCC----CchhhHHHHHHHHHHHHcCchhcCCHhhcCccCCCcchHHHHHHHHHHHHH
Confidence 9999999999999999999999998 478899999999998 69999999999997 4999999999999999999
Q ss_pred cCC
Q 004588 622 QQQ 624 (743)
Q Consensus 622 ~~~ 624 (743)
+..
T Consensus 272 KmK 274 (2473)
T KOG0517|consen 272 KMK 274 (2473)
T ss_pred HHH
Confidence 865
No 3
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=100.00 E-value=2.1e-49 Score=418.08 Aligned_cols=574 Identities=29% Similarity=0.459 Sum_probs=476.7
Q ss_pred CHHHHHH-HHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHH-HHhhhcCC
Q 004588 19 TQVELRS-LKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRA-YINLQGRA 95 (743)
Q Consensus 19 t~~e~~~-l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~-~~~~~~~~ 95 (743)
+.+++-. ....|..+| |..|.|...++-.++.+ . ..-+-++..++..+...|.+|.++|..|... +.++-. .
T Consensus 18 ~nekL~s~~~~~~~dL~~Dl~dgv~l~qlLe~~~k--d--~~g~yn~~p~tr~h~~envs~~le~ik~kg~~l~Nigp-~ 92 (612)
T COG5069 18 TNEKLISGGQKEFGDLDTDLKDGVKLAQLLEALQK--D--NAGEYNETPETRIHVMENVSGRLEFIKGKGVKLFNIGP-Q 92 (612)
T ss_pred HhHHHhhcccHHHhhhccccccHHHHHHHHHHhhh--c--cccccCCCHHHHHHHhhccccceeeeccCCceeeeeCc-c
Confidence 3444333 445666678 88899988777777764 1 1233456677888888899999999999872 122211 1
Q ss_pred CCCCCCCCcch-HHHHhhhcccccccchhhhhHHHHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHHHHHHHHHHcC
Q 004588 96 TTKPGSAKNSS-SFLKASTTTLLHTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVP 174 (743)
Q Consensus 96 ~~~~g~~~~s~-~~lk~~~~~~~~~~~~~e~~~f~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~L~~Lle~l~~ 174 (743)
..-+|+.+... -..+-..+...|++.|++ .|+.+||..|.-+++...|.| ...+-|++...+||..||+|++.-.|
T Consensus 93 divdGn~klilGliw~lisr~tia~inEeg--elt~~~~lllwc~~~t~~y~p-~vd~~df~rswrdGLaf~aLIh~~rP 169 (612)
T COG5069 93 DIVDGNPKLILGLIWSLISRLTIATINEEG--ELTKHINLLLWCDEDTGGYKP-EVDTFDFFRSWRDGLAFSALIHDSRP 169 (612)
T ss_pred ccccCchhhhheeeeeeeehhhhhcccchh--hHHhhhhhheeccccccCcCC-CccHHHHHHHhhhhHHHHHHHhhcCC
Confidence 22346644432 233334556677888777 899999999999999999999 56789999999999999999999999
Q ss_pred CCccccccccC---CCCChhHHHHHHHHHHHHHHHcC-CeeeecCccccccCchhhHhhhhhhhhhhhhhhccccccCcc
Q 004588 175 GTIDERAINTK---RVINPWERNENHTLCLNSAKAIG-CTVVNIGTQDLVEGRPHLILGLISQIIKIQLLADLNLKKTPQ 250 (743)
Q Consensus 175 ~~i~~~~i~~~---~~~~~~~~~eNv~~~L~~~k~~G-~~l~~i~~~DIvdG~~~liLgLiW~LI~~~~l~~i~~~~~p~ 250 (743)
++++.+..+.. ++.+.+|..+|.+.+++.++.+| +.+++++..| + +..+|+ ++|+++++..+..+.+..+ +
T Consensus 170 Dtld~n~ld~qkknk~~n~~qafe~a~k~Igi~rli~vedivnV~~pD--E-Rsimty-v~~y~~rf~~l~Kid~al~-r 244 (612)
T COG5069 170 DTLDPNVLDLQKKNKALNNFQAFENANKVIGIARLIGVEDIVNVSIPD--E-RSIMTY-VSWYIIRFGLLEKIDIALH-R 244 (612)
T ss_pred cccCccccchhhcccchhHHHHHHHHHHhhchHhhcCcceeeecCCcc--h-HHHHHH-HHHHHHHHhhHHHHHHHHH-H
Confidence 99999887632 35678999999999999999987 8999999999 4 777888 9999999999988877666 6
Q ss_pred hhhcccCCchhHHhhcCChHHHHHHHHH-HHhhhcCCCcccccCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCHHHHH
Q 004588 251 LVELVEDNSDVEELMGLAPEKVLLKWMN-YHLKKAGYEKPVTNFSSDLKDGKAYTYLLNVLAPEHCNPATLDMKDPTERA 329 (743)
Q Consensus 251 ~~~~~~~~e~~~~~~~~s~e~~LL~Wvn-~~L~~~~~~~~V~nFssd~~DG~al~~Ll~~~~P~~~~~~~l~~~~~~~n~ 329 (743)
+.++.+..+...+ .+.++|.+|++|++ .|+..+.. +|.||+.+.+||.-+..|++.+. .+|...++..-+..+++
T Consensus 245 v~rllE~~et~~q-lrl~yE~~l~rll~~i~~~q~~w--~v~~f~k~vsd~en~t~ll~ql~-alcsRa~lettdl~sl~ 320 (612)
T COG5069 245 VYRLLEADETLIQ-LRLPYEIILLRLLNLIHLKQANW--KVVNFSKDVSDGENYTDLLNQLN-ALCSRAPLETTDLHSLA 320 (612)
T ss_pred HHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHhccc--chhhhhhhhhhHHHHHHHHHHHH-HHhhcccchhhhHHHHH
Confidence 6667666666666 78899999999999 88777654 49999999999999999999999 77877888788999999
Q ss_pred HHHHHhhhhcCCccccCcccccccCccchHHhHhhhhhhcCCCCccccchhhhhhchhhhhhhhhhHHHHHHHHhhcCCc
Q 004588 330 KLVLDHAERMDCKRYLSPKDIVEGSANLNLAFVAQVFHQRSGLTTDSKKISFAEMITDDVQTSREERCFRLWINSLGIAT 409 (743)
Q Consensus 330 ~~a~~~ae~lgi~~~l~peDi~~~~~d~~l~yls~l~~~~~~~~~~~~~~~~~~~~~~d~~~~~q~~~f~~WiN~~~~~~ 409 (743)
..+.+.|+++.|.+|++| .|+|+..+.|++.+|+.+||+.+-.+ .-..+-.+.|.+.+.+.++||-|.|++.+.+
T Consensus 321 gqi~~n~e~y~~RKY~pP----AGnpkldla~~~~lF~t~~~qe~l~~-~~~~eI~e~d~e~efear~~Tf~l~~~~vsp 395 (612)
T COG5069 321 GQILQNAEKYDCRKYLPP----AGNPKLDLAFVAHLFNTHPGQEPLEE-EEKPEIEEFDAEGEFEARVFTFWLNSLDVSP 395 (612)
T ss_pred HHHHHHHHHhhhhccCCC----CCCcccchHHHHhhcCCCcccchhhh-hcccccCCcchhhHHHHHHHHHHHHHhcCCh
Confidence 999999999999999999 89999999999999999999765321 1112344456778889999999999999999
Q ss_pred cccchhHhhhhHHHHHHHHHHhC-CCCccccccCCCC----CCChhHHHHHHHHHHHHHHhhhccccCCCCcccccChhH
Q 004588 410 YCNNVFEDVRNGWLLLEVLDKVS-PGSVDWKQASKPP----IKMPFRKVENCNQVIKIGKQLKFSLVNVAGNDFVQGNKK 484 (743)
Q Consensus 410 ~v~dl~~Dl~DG~~L~~Lle~ls-~~~v~~k~~~~~~----~~~~~~~ieN~~~~l~~~k~~g~~l~nI~~~DIvdG~~k 484 (743)
.|.|++.|+|||..|.+.+++.. |.+++|+.+++.| -.+||++++|++++.+++...|+++++|.+-||++|++
T Consensus 396 ~i~~l~gd~Rdql~~lq~l~k~l~p~tv~~~~vk~~~asG~E~~rfka~en~nyavdlG~~~gf~~v~ik~le~~~~~r- 474 (612)
T COG5069 396 EITNLFGDLRDQLILLQALSKKLMPMTVTHKLVKKQPASGIEENRFKAFENENYAVDLGITEGFSLVGIKGLEILDGIR- 474 (612)
T ss_pred hhhhhcccHHHHHHHHHHHHhhcCCceechhhhcccccccchhhhhhhhcccchhhhhhhhcCeeeeeechhhhhhhhH-
Confidence 99999999999999999888887 9999999988765 24689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcccCCCcccChhHHHHHHhHHhhccCCccccccCCCCCCCC-hHHHHHHhhhcCCCcee
Q 004588 485 LILAFLWQLMRFNMLQLLKNLRSRSQGKEITDAGILKWANDKVKSTGRTSQMESFKDKSLSN-GLFFLELLSSVEPRVVN 563 (743)
Q Consensus 485 liL~LlW~Li~~~i~~~~~~l~~~~~g~~~~~~~LL~W~~~~~~~~~~~~~i~nfsd~s~~d-G~a~~aLl~~~~P~~i~ 563 (743)
+.++|.||+||..+.-...-++ .+|..+++.++..|++...-.|+++-.|..|.|.+-+. |..+..+++-+.|.++|
T Consensus 475 ~k~tl~~q~l~~~t~~f~h~lk--k~~~~lsdsd~~a~l~slgl~~dk~egi~~F~~~a~s~~gv~yl~v~~~i~sel~D 552 (612)
T COG5069 475 LKLTLVWQVLRSNTALFNHVLK--KDGCGLSDSDLCAWLGSLGLKGDKEEGIRSFGDPAGSVSGVFYLDVLKGIHSELVD 552 (612)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--cCCCCCCHHHHHHHHHHhccccCCccceeeccCCccccccchHHHHHHHHhhhhcC
Confidence 9999999999877654332222 35788899999999999988888888899999989988 99999999999999999
Q ss_pred cccccCCCChHHHHHhHH-HHHH--HHHHcCCCcccCcchhccCCchH-HHHHHHHHH
Q 004588 564 WNLVTKGESDEEKRLNAT-YIIS--VARKLGCSIFLLPEDIMEVNQKM-ILTLTASIM 617 (743)
Q Consensus 564 ~~~l~~~~~~~~~~~n~~-~a~~--~A~~lGi~~ll~peDi~~~d~k~-iltyls~~~ 617 (743)
|+.++++.+..+...|++ +|++ ++|++|--..+.|+||....+.. ++||+.+++
T Consensus 553 ~d~v~~~~~~f~diad~rsl~is~~ilRs~~aii~~lpe~in~~r~~Ldvltfi~slm 610 (612)
T COG5069 553 YDLVTRGFTEFDDIADARSLAISSKILRSLGAIIKFLPEDINGVRPRLDVLTFIESLM 610 (612)
T ss_pred hhhhhhhHHHHHHhhhhhhhhccHHHHHHhhhHheechhhhcccCccchHHHHHHHHh
Confidence 999999877778888999 9999 99999977889999999887766 999999987
No 4
>KOG0517 consensus Beta-spectrin [Cytoskeleton]
Probab=100.00 E-value=1e-44 Score=423.95 Aligned_cols=243 Identities=25% Similarity=0.387 Sum_probs=216.0
Q ss_pred cchHHHHhhhcccccccchhhhhHHHHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHHHHHHHHHHcCCCccccccc
Q 004588 104 NSSSFLKASTTTLLHTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAIN 183 (743)
Q Consensus 104 ~s~~~lk~~~~~~~~~~~~~e~~~f~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~L~~Lle~l~~~~i~~~~i~ 183 (743)
...-|=..-..++.......||||||+|||++|+.- ...|.|||+||+||+.|++|+|+|+|+.++.+
T Consensus 29 sa~lFErsRIKaLadERe~vQKKTFTKWvNShL~rv---------~c~I~DLy~DlrDG~~LlkLLEvlSGE~LpkP--- 96 (2473)
T KOG0517|consen 29 SARLFERSRIKALADEREAVQKKTFTKWVNSHLARV---------SCRIGDLYTDLRDGIMLLKLLEVLSGERLPKP--- 96 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh---------cchhHHHHHHHhhhHHHHHHHHHHccccCCCC---
Confidence 334455556677788889999999999999999764 34799999999999999999999999998652
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHcCCeeeecCccccccCchhhHhhhhhhhhhhhhhhccccccCcchhhcccCCchhHH
Q 004588 184 TKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLILGLISQIIKIQLLADLNLKKTPQLVELVEDNSDVEE 263 (743)
Q Consensus 184 ~~~~~~~~~~~eNv~~~L~~~k~~G~~l~~i~~~DIvdG~~~liLgLiW~LI~~~~l~~i~~~~~p~~~~~~~~~e~~~~ 263 (743)
.+.+ .|+|++||++.+|.|+|...+.+.|||+.||||||+.+||||||+||.+|++++|.+... ++.
T Consensus 97 trGR-MRIH~LENvdKaLqFLkeqkVhLEniGshDIVDGN~rL~LGLIWTIILRFQIq~I~ie~e--------dn~---- 163 (2473)
T KOG0517|consen 97 TRGR-MRIHCLENVDKALQFLKEQKVHLENIGSHDIVDGNHRLILGLIWTIILRFQIQDISIETE--------DNR---- 163 (2473)
T ss_pred CCCc-eeehhHhhhHHHHHHHHhcccccccCCcccccCCcchhhHHHHHHHHHheeeeeeEeecc--------cch----
Confidence 3333 489999999999999999999999999999999999999999999999999999987431 111
Q ss_pred hhcCChHHHHHHHHHHHhhhcCCCc-ccccCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCHHHHHHHHHHhhhh-cCC
Q 004588 264 LMGLAPEKVLLKWMNYHLKKAGYEK-PVTNFSSDLKDGKAYTYLLNVLAPEHCNPATLDMKDPTERAKLVLDHAER-MDC 341 (743)
Q Consensus 264 ~~~~s~e~~LL~Wvn~~L~~~~~~~-~V~nFssd~~DG~al~~Ll~~~~P~~~~~~~l~~~~~~~n~~~a~~~ae~-lgi 341 (743)
...|++.+||-|||. +++||+. .|+||++||+||.+|.+|||+++|+++||+.+.+.++..|++.||++|++ |||
T Consensus 164 -E~rSAKDALLLWCQm--KTAGYpnVNI~nFTtSWRdGLaFNALIHkHRPDLvDf~~L~k~na~~NL~~AFdvAE~~LGi 240 (2473)
T KOG0517|consen 164 -ETRSAKDALLLWCQM--KTAGYPNVNITNFTTSWRDGLAFNALIHKHRPDLVDFDKLKKSNALYNLQHAFDVAEQELGI 240 (2473)
T ss_pred -hhhhHHHHHHHHHHh--hccCCCCcccccCccchhcchhHHHHHHhcCcchhhhcccCCCchhhHHHHHHHHHHHHcCc
Confidence 245799999999997 8889985 99999999999999999999999999999999999999999999999997 999
Q ss_pred ccccCcccccccCcc--chHHhHhhhhhhcCCCCc
Q 004588 342 KRYLSPKDIVEGSAN--LNLAFVAQVFHQRSGLTT 374 (743)
Q Consensus 342 ~~~l~peDi~~~~~d--~~l~yls~l~~~~~~~~~ 374 (743)
+++|+||||....|| ||||||+.+||+|+.+..
T Consensus 241 a~LLDpEDV~v~~PDEKSIITYV~~YYHyFsKmK~ 275 (2473)
T KOG0517|consen 241 AKLLDPEDVNVEQPDEKSIITYVVTYYHYFSKMKQ 275 (2473)
T ss_pred hhcCCHhhcCccCCCcchHHHHHHHHHHHHHHHHH
Confidence 999999999999987 999999999999986543
No 5
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=100.00 E-value=8.1e-34 Score=300.27 Aligned_cols=424 Identities=22% Similarity=0.246 Sum_probs=301.3
Q ss_pred cccchhhhhHHHHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHHHHHHHHHHcCCCccccccccCCCCChhHHHHHH
Q 004588 118 HTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENH 197 (743)
Q Consensus 118 ~~~~~~e~~~f~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~L~~Lle~l~~~~i~~~~i~~~~~~~~~~~~eNv 197 (743)
..|...|+++|++|.|..|-.+. -+.+.||..|++||+.|..+++.+..+.... +|.. +-.++|+++|+
T Consensus 4 ~kwq~vq~ktftkw~nekL~s~~--------~~~~~dL~~Dl~dgv~l~qlLe~~~kd~~g~--yn~~-p~tr~h~~env 72 (612)
T COG5069 4 KKWQKVQKKTFTKWTNEKLISGG--------QKEFGDLDTDLKDGVKLAQLLEALQKDNAGE--YNET-PETRIHVMENV 72 (612)
T ss_pred HHHHHHhhccchHHHhHHHhhcc--------cHHHhhhccccccHHHHHHHHHHhhhccccc--cCCC-HHHHHHHhhcc
Confidence 36889999999999999998853 2478999999999999999999998664432 2333 34589999999
Q ss_pred HHHHHHHHHcCCeeeecCccccccCchhhHhhhhhhhhhhhhhhccccccCcchhhcccCCchhHHhhcCChHHHHHHHH
Q 004588 198 TLCLNSAKAIGCTVVNIGTQDLVEGRPHLILGLISQIIKIQLLADLNLKKTPQLVELVEDNSDVEELMGLAPEKVLLKWM 277 (743)
Q Consensus 198 ~~~L~~~k~~G~~l~~i~~~DIvdG~~~liLgLiW~LI~~~~l~~i~~~~~p~~~~~~~~~e~~~~~~~~s~e~~LL~Wv 277 (743)
+.+|.+.+..|+++.||++.|||+|++++|+||||.+|..+.++.++- + + .++...-++.||
T Consensus 73 s~~le~ik~kg~~l~Nigp~divdGn~klilGliw~lisr~tia~inE-----------e-g------elt~~~~lllwc 134 (612)
T COG5069 73 SGRLEFIKGKGVKLFNIGPQDIVDGNPKLILGLIWSLISRLTIATINE-----------E-G------ELTKHINLLLWC 134 (612)
T ss_pred ccceeeeccCCceeeeeCccccccCchhhhheeeeeeeehhhhhcccc-----------h-h------hHHhhhhhheec
Confidence 999999999999999999999999999999999999999998887751 1 1 234567799999
Q ss_pred HHHhhhcCCCcccccCCCCCcchHHHHHHHHhhCCCCCCCCCCC--CCCHHHHHHHHHHhhhh-cCCccccCcccccccC
Q 004588 278 NYHLKKAGYEKPVTNFSSDLKDGKAYTYLLNVLAPEHCNPATLD--MKDPTERAKLVLDHAER-MDCKRYLSPKDIVEGS 354 (743)
Q Consensus 278 n~~L~~~~~~~~V~nFssd~~DG~al~~Ll~~~~P~~~~~~~l~--~~~~~~n~~~a~~~ae~-lgi~~~l~peDi~~~~ 354 (743)
+.....+..+..+.+|..+|+||.|||+|||..+|+.+|+..++ .+++.-|...||+.|++ +|+++++..+||++..
T Consensus 135 ~~~t~~y~p~vd~~df~rswrdGLaf~aLIh~~rPDtld~n~ld~qkknk~~n~~qafe~a~k~Igi~rli~vedivnV~ 214 (612)
T COG5069 135 DEDTGGYKPEVDTFDFFRSWRDGLAFSALIHDSRPDTLDPNVLDLQKKNKALNNFQAFENANKVIGIARLIGVEDIVNVS 214 (612)
T ss_pred cccccCcCCCccHHHHHHHhhhhHHHHHHHhhcCCcccCccccchhhcccchhHHHHHHHHHHhhchHhhcCcceeeecC
Confidence 98554333334678999999999999999999999999998776 78888999999999999 9999999999999986
Q ss_pred -cc--chHHhHhhhhhhcCCCCccccchh-hhhhchhhhhhhh----hhHHHHHHHHh-hcCC--ccccchhHhhhhHHH
Q 004588 355 -AN--LNLAFVAQVFHQRSGLTTDSKKIS-FAEMITDDVQTSR----EERCFRLWINS-LGIA--TYCNNVFEDVRNGWL 423 (743)
Q Consensus 355 -~d--~~l~yls~l~~~~~~~~~~~~~~~-~~~~~~~d~~~~~----q~~~f~~WiN~-~~~~--~~v~dl~~Dl~DG~~ 423 (743)
|| ++|+||+-+|+.|.-+........ +....+.++|... =+....+|.|. ++.+ -+|.++..|.+||-.
T Consensus 215 ~pDERsimtyv~~y~~rf~~l~Kid~al~rv~rllE~~et~~qlrl~yE~~l~rll~~i~~~q~~w~v~~f~k~vsd~en 294 (612)
T COG5069 215 IPDERSIMTYVSWYIIRFGLLEKIDIALHRVYRLLEADETLIQLRLPYEIILLRLLNLIHLKQANWKVVNFSKDVSDGEN 294 (612)
T ss_pred CcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcccchhhhhhhhhhHHH
Confidence 55 899999999999987775422111 1122222322211 13467899995 5543 458899999999988
Q ss_pred HHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHHHHHhhhccccCCCCcccccChhHHHHHHHHHHHHHH-HHhhh
Q 004588 424 LLEVLDKVSPGSVDWKQASKPPIKMPFRKVENCNQVIKIGKQLKFSLVNVAGNDFVQGNKKLILAFLWQLMRFN-MLQLL 502 (743)
Q Consensus 424 L~~Lle~ls~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~~g~~l~nI~~~DIvdG~~kliL~LlW~Li~~~-i~~~~ 502 (743)
...++..+. ..+ .+.| .....-.+-...++.-++...|.- ..+- .|++++=|++.|-++.-. -...+
T Consensus 295 ~t~ll~ql~-alc-----sRa~-lettdl~sl~gqi~~n~e~y~~RK--Y~pP---AGnpkldla~~~~lF~t~~~qe~l 362 (612)
T COG5069 295 YTDLLNQLN-ALC-----SRAP-LETTDLHSLAGQILQNAEKYDCRK--YLPP---AGNPKLDLAFVAHLFNTHPGQEPL 362 (612)
T ss_pred HHHHHHHHH-HHh-----hccc-chhhhHHHHHHHHHHHHHHhhhhc--cCCC---CCCcccchHHHHhhcCCCcccchh
Confidence 777777765 222 1112 122233333344444444333321 1111 899999999999885321 11221
Q ss_pred hhhcccCCCccc----ChhH--HHHHHhHHhhccCCccccccCCCCCCCChHHHHHHhhhcC-CCceecccccCCC----
Q 004588 503 KNLRSRSQGKEI----TDAG--ILKWANDKVKSTGRTSQMESFKDKSLSNGLFFLELLSSVE-PRVVNWNLVTKGE---- 571 (743)
Q Consensus 503 ~~l~~~~~g~~~----~~~~--LL~W~~~~~~~~~~~~~i~nfsd~s~~dG~a~~aLl~~~~-P~~i~~~~l~~~~---- 571 (743)
.+... ..=+.. .-++ .--|.+...- ..+|+||- .+||||+.+..-+..+- |..+++..+....
T Consensus 363 ~~~~~-~eI~e~d~e~efear~~Tf~l~~~~v----sp~i~~l~-gd~Rdql~~lq~l~k~l~p~tv~~~~vk~~~asG~ 436 (612)
T COG5069 363 EEEEK-PEIEEFDAEGEFEARVFTFWLNSLDV----SPEITNLF-GDLRDQLILLQALSKKLMPMTVTHKLVKKQPASGI 436 (612)
T ss_pred hhhcc-cccCCcchhhHHHHHHHHHHHHHhcC----Chhhhhhc-ccHHHHHHHHHHHHhhcCCceechhhhcccccccc
Confidence 11000 000000 1122 3558877533 24699998 79999999888888776 9999988776532
Q ss_pred --ChHHHHHhHHHHHHHHH
Q 004588 572 --SDEEKRLNATYIISVAR 588 (743)
Q Consensus 572 --~~~~~~~n~~~a~~~A~ 588 (743)
++-...+|..||.++..
T Consensus 437 E~~rfka~en~nyavdlG~ 455 (612)
T COG5069 437 EENRFKAFENENYAVDLGI 455 (612)
T ss_pred hhhhhhhhcccchhhhhhh
Confidence 22344556666655554
No 6
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=99.97 E-value=1.6e-32 Score=314.96 Aligned_cols=460 Identities=19% Similarity=0.213 Sum_probs=309.0
Q ss_pred CcchHHHHhhhcccccccchhhhhHHHHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHHHHHHHHHHcCCCcccccc
Q 004588 103 KNSSSFLKASTTTLLHTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAI 182 (743)
Q Consensus 103 ~~s~~~lk~~~~~~~~~~~~~e~~~f~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~L~~Lle~l~~~~i~~~~i 182 (743)
++-..+=.....-....|.+.|.++|+.|.|++|.-+. ...+.++.+|+.||+.|..|++.+.|..++..
T Consensus 7 ~l~~e~~~a~~~~~~~~~e~~q~kTft~W~~s~L~ir~--------~s~ie~~e~D~~n~lk~~~l~ev~~~e~l~~~-- 76 (890)
T KOG0035|consen 7 RLQREEEWAAKFLLTPAWEKVQLKTFTKWCNSKLRIRA--------GSSIEEIEEDFSNGLKLLILLEVISGENLPPP-- 76 (890)
T ss_pred ccchhhHHHHHhhcCccHHHHhccccccccchhhhhcc--------cCccchhhhhhhhhhhhhhhcccccCCccCCC--
Confidence 33344444555556789999999999999999998331 34688999999999999999999999998652
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHcCCeeeecCccccccCchhhHhhhhhhhhhhhhhhccccccCcchhhcccCCchhH
Q 004588 183 NTKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLILGLISQIIKIQLLADLNLKKTPQLVELVEDNSDVE 262 (743)
Q Consensus 183 ~~~~~~~~~~~~eNv~~~L~~~k~~G~~l~~i~~~DIvdG~~~liLgLiW~LI~~~~l~~i~~~~~p~~~~~~~~~e~~~ 262 (743)
+ . ...++|++||++.+|.+.+.-|+.+++|++++|++||.++++|++|.||+.+-+.++++.
T Consensus 77 ~-~-~~~r~hk~En~~~~l~~~~sk~v~~~~iga~eivd~n~~~~l~~i~tlilr~~i~~is~~---------------- 138 (890)
T KOG0035|consen 77 T-R-GKMRVHKLENVNKALVFIESKGVKLVSIGAEEIVDGNLKLTLGLIWTLILRFAIQDISVE---------------- 138 (890)
T ss_pred C-C-CccchhhhccccceEEEeccccccccccchhhhcCcchhhhhHHHHHhhccccccchhhh----------------
Confidence 2 2 245899999999999999999999999999999999999999999999999988776531
Q ss_pred HhhcCChHHHHHHHHHHHhhhcCCC-cccccCCCCCcchHHHHHHHHhhCCCCCC-CCCCCCCCHHHHHHHHHHhhhh-c
Q 004588 263 ELMGLAPEKVLLKWMNYHLKKAGYE-KPVTNFSSDLKDGKAYTYLLNVLAPEHCN-PATLDMKDPTERAKLVLDHAER-M 339 (743)
Q Consensus 263 ~~~~~s~e~~LL~Wvn~~L~~~~~~-~~V~nFssd~~DG~al~~Ll~~~~P~~~~-~~~l~~~~~~~n~~~a~~~ae~-l 339 (743)
-..++..-||.||+.... +|. +.|.||.++|+||.+||++||+++|++++ |..++..++.+|++.||++|++ +
T Consensus 139 --~e~~a~egllLwcq~~Ta--~y~~v~v~nF~~sw~~gl~f~A~ih~~Rpdli~~y~~lt~~~~~~n~~~A~~iAek~l 214 (890)
T KOG0035|consen 139 --CELSAKEGLLLWCQRKTA--PYSNVNVQNFHTSWKDGLAFCALIHRHRPDLIDQYDKLTKQDPVENLNLAFDIAEKFL 214 (890)
T ss_pred --cchhhhhhhhhheecccC--CccccccccceecccchHHHHHHHHhcChhhhhhhhhcCccchhHHhhhhhhhhhhcC
Confidence 023567889999998444 454 48999999999999999999999999999 9999999999999999999999 9
Q ss_pred CCccccCcccccccC-cc--chHHhHhhhhhhcCCCCccc--c-ch----hhhhhchhhhhhhhhhHH--HHHHHHhhcC
Q 004588 340 DCKRYLSPKDIVEGS-AN--LNLAFVAQVFHQRSGLTTDS--K-KI----SFAEMITDDVQTSREERC--FRLWINSLGI 407 (743)
Q Consensus 340 gi~~~l~peDi~~~~-~d--~~l~yls~l~~~~~~~~~~~--~-~~----~~~~~~~~d~~~~~q~~~--f~~WiN~~~~ 407 (743)
||++.|+++|++... |+ .+|+|++++|+.|+|.+.-. + .+ ...+.-.. .-++.+..+ ...|+..-..
T Consensus 215 ~i~r~ld~ed~~~~~~pde~aimtyv~~~~~~fSg~~~~~t~~n~i~s~~av~qe~~~-~~e~~e~~~s~~l~~~~~~~P 293 (890)
T KOG0035|consen 215 GIPRLLDAEDIVEAAIPDEKAIMTYVSSYYHAFSGAEAAETAANRICSVLAVNQEKET-TMEEYETLASELLEWIARRTP 293 (890)
T ss_pred CcccccCccccccCCCCchhhhhhhhhhccccccCcchhhhhcccccchhhccccccc-hHHHHHHHhhhhhhHHHhcCc
Confidence 999999999999984 55 79999999999999876311 0 00 11111111 112222222 3566665311
Q ss_pred --Cccccc--------hhHhhhhHHHHHHHHHHhCCCCccccccCCCCCCChhHHHHHH--------HHHH--HHHHhhh
Q 004588 408 --ATYCNN--------VFEDVRNGWLLLEVLDKVSPGSVDWKQASKPPIKMPFRKVENC--------NQVI--KIGKQLK 467 (743)
Q Consensus 408 --~~~v~d--------l~~Dl~DG~~L~~Lle~ls~~~v~~k~~~~~~~~~~~~~ieN~--------~~~l--~~~k~~g 467 (743)
...+.+ =..+.+|-+ .+...+++....-+++++. .... .++...|
T Consensus 294 ~l~~r~~~~~~~~~q~~l~~~rd~~---------------~r~~~~e~~v~~~~~~~~~~st~q~k~~~~~~p~~~~s~~ 358 (890)
T KOG0035|consen 294 WLQNRVTDSVGAKAQRKLEFSRDAV---------------YRRLEKEPLVEDKGRLESGFSTLQTKLRLESRPAKLASSG 358 (890)
T ss_pred ccccccccchhhhhccccccccccc---------------cccccccccccccccccccchhhhhhhhhhcccccCcccc
Confidence 011111 112222211 1112222211111111111 0111 1112222
Q ss_pred ccccCCCCcccccChhHH-HHHHHHHH---HHHHHHhhhhh-hc----cc---CCCccc------ChhHHHHHHhHHhhc
Q 004588 468 FSLVNVAGNDFVQGNKKL-ILAFLWQL---MRFNMLQLLKN-LR----SR---SQGKEI------TDAGILKWANDKVKS 529 (743)
Q Consensus 468 ~~l~nI~~~DIvdG~~kl-iL~LlW~L---i~~~i~~~~~~-l~----~~---~~g~~~------~~~~LL~W~~~~~~~ 529 (743)
+....+ .|-+.|.... ++---|-+ ++..+...+.. .+ .+ ..|++. ....||.||++.+.+
T Consensus 359 ~~~S~~--~~~~~~le~~~~~~e~~ll~~~~~l~~~~~~~~~f~~~~s~~~~~~pg~e~~l~~~d~~~~lle~~ke~~~~ 436 (890)
T KOG0035|consen 359 VLVSDI--NDAWQGLEQAEKLYEESLLAEIRRLERLEHLASKFSQKASLHESWTPGKEQVLFLNDYGQALLEECKELTKK 436 (890)
T ss_pred cccccc--cccccchhhhcccccccchhhhHHHhhhhhhhhhccccCchhhhhccchhhhhhhcchHHHHHHHHHhhccc
Confidence 222222 2233333111 11112333 22222221110 00 00 112211 136789999999999
Q ss_pred cCCccccccCCCCCCCChHHHHHHhhhcCCCceecccccCCCChHHHHHhHHHHHHHHHHcCCCcccCcchhcc---CCc
Q 004588 530 TGRTSQMESFKDKSLSNGLFFLELLSSVEPRVVNWNLVTKGESDEEKRLNATYIISVARKLGCSIFLLPEDIME---VNQ 606 (743)
Q Consensus 530 ~~~~~~i~nfsd~s~~dG~a~~aLl~~~~P~~i~~~~l~~~~~~~~~~~n~~~a~~~A~~lGi~~ll~peDi~~---~d~ 606 (743)
| ..+.++++. +|.+|.+||||+|.|.|..++++.... .+...|..-.++.+.- +++..|.++.- +|.
T Consensus 437 ~-ea~~~~~~~--~~~~~e~~~ai~~~~~~~~~~~~~~~a----~~~q~i~dq~~~~~~l---s~~r~pal~~~~~~~dk 506 (890)
T KOG0035|consen 437 H-EAFESDLSA--HQDNVEAFCAIAHELNELLYDDAKLVA----ADCQHICDQWDDLGQL---SRKRRPALMQMEKVLDK 506 (890)
T ss_pred c-cccccchhh--hhcchhHHHHHHHHhhhhhhhhhhhhh----hhhhhccccccccchh---hhhhchhhhhhhhhhHH
Confidence 9 689999984 899999999999999999998887765 4555566655555543 67777777752 688
Q ss_pred hHHHHHHHHHHHHhhc
Q 004588 607 KMILTLTASIMYWSLQ 622 (743)
Q Consensus 607 k~iltyls~~~~~~~~ 622 (743)
..+|+|.......+.+
T Consensus 507 ~~~~~le~a~Raa~~~ 522 (890)
T KOG0035|consen 507 LAVLTLEFAKRAAPFN 522 (890)
T ss_pred HHHHHHHHHHHhhhhh
Confidence 8889998777655544
No 7
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=99.97 E-value=1.2e-30 Score=279.46 Aligned_cols=243 Identities=26% Similarity=0.420 Sum_probs=208.4
Q ss_pred CCCCcchHHHHhh--hccccc--------------ccchhhhhHHHHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhH
Q 004588 100 GSAKNSSSFLKAS--TTTLLH--------------TISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGV 163 (743)
Q Consensus 100 g~~~~s~~~lk~~--~~~~~~--------------~~~~~e~~~f~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv 163 (743)
|+.++..+|++.. .....+ .....|+++|+.|+|+ |+- ++.|+++|+|++||.
T Consensus 349 G~~kLNLAFVA~lFn~~pgL~~~~~~~~~e~~~~~~~~~reer~fr~WmNS-lgv----------~p~vn~~f~Dl~dgl 417 (627)
T KOG0046|consen 349 GNPKLNLAFVANLFNTHPGLEKPENEEIAEMMTEDEEESREERTFRLWMNS-LGV----------NPYVNNLFEDLRDGL 417 (627)
T ss_pred CCchhhHHHHHHhcccCCCCCCccccchhcccchhHhHHHHHHHHHHHHHh-cCC----------cHHHHHHHHhhhhhh
Confidence 8899999999986 111122 2344578999999999 444 457999999999999
Q ss_pred HHHHHHHHHcCCCccccccccCC--CCChhHHHHHHHHHHHHHHHcCCeeeecCccccccCchhhHhhhhhhhhhhhhhh
Q 004588 164 LLCKLINIAVPGTIDERAINTKR--VINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLILGLISQIIKIQLLA 241 (743)
Q Consensus 164 ~L~~Lle~l~~~~i~~~~i~~~~--~~~~~~~~eNv~~~L~~~k~~G~~l~~i~~~DIvdG~~~liLgLiW~LI~~~~l~ 241 (743)
+|..+++++.++.++++..++++ ....++++||++.+++..|+.+..+++|...||++||.+++|+|+|||||+|.++
T Consensus 418 Vllq~~dki~pg~Vnwk~vnKp~~~~~~~~kklENcNyav~lGk~~~FSLVgi~G~DI~dGNk~LtLAlvWQLMR~ytL~ 497 (627)
T KOG0046|consen 418 VLLQLYDKVSPGSVNWKHVNKPPSPLKMPFKKVENCNYAVKLGKQLKFSLVGIAGQDIVDGNKTLTLALVWQLMRRYTLQ 497 (627)
T ss_pred HHHHHHHHccCCccchhhccCCCCcccccHHHhhcchHHHHHHhhcceeeeccccccccccchHhHHHHHHHHHHHHHHH
Confidence 99999999999999999888873 3346899999999999999999999999999999999999999999999999886
Q ss_pred ccccccCcchhhcccCCchhHHhhcCChHHHHHHHHHHHhhhcCCCcccccCCC-CCcchHHHHHHHHhhCCCCCCCCCC
Q 004588 242 DLNLKKTPQLVELVEDNSDVEELMGLAPEKVLLKWMNYHLKKAGYEKPVTNFSS-DLKDGKAYTYLLNVLAPEHCNPATL 320 (743)
Q Consensus 242 ~i~~~~~p~~~~~~~~~e~~~~~~~~s~e~~LL~Wvn~~L~~~~~~~~V~nFss-d~~DG~al~~Ll~~~~P~~~~~~~l 320 (743)
.+. .+...+. ...++.++.|+|..+++.|....|.+|.+ +.+||+++..||+.+.|+.++|+-+
T Consensus 498 vL~--------~l~~~~~-------~~tD~dIv~WaN~klk~~Gk~s~IrSFkD~siS~g~~vLDLidaI~P~~Vn~~LV 562 (627)
T KOG0046|consen 498 VLK--------SLRSGGK-------DITDSDIVNWANRKLKKAGKKSQIRSFKDKSISDGLFVLDLLDAIKPGVVNYSLV 562 (627)
T ss_pred HHH--------HHhhcCC-------CCcHHHHHHHHHHHHHhcCCccccccccCcccccCcchHHHHhhcCcCccchhhc
Confidence 542 1111211 23578899999999999987779999986 7999999999999999999998755
Q ss_pred ----CCCCHHHHHHHHHHhhhhcCCccccCcccccccCccchHHhHhhhhhh
Q 004588 321 ----DMKDPTERAKLVLDHAERMDCKRYLSPKDIVEGSANLNLAFVAQVFHQ 368 (743)
Q Consensus 321 ----~~~~~~~n~~~a~~~ae~lgi~~~l~peDi~~~~~d~~l~yls~l~~~ 368 (743)
+.+++..|+++|+.+|+++||..|+-||||++.+|++||++.|+||..
T Consensus 563 ~~G~t~EdK~~NAkYaIS~ARKiGa~IyaLPEDIvEV~pKMvltvfA~lM~~ 614 (627)
T KOG0046|consen 563 TSGNTDEEKLLNAKYAISVARKLGASIYALPEDIVEVNPKMVLTVFASLMAW 614 (627)
T ss_pred cCCCChhhhhhcchhhHhHHHhhCceEEeccHHHhhhchhhhHHHHHHHHHh
Confidence 467889999999999999999999999999999999999999999964
No 8
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=99.97 E-value=5.8e-32 Score=310.34 Aligned_cols=225 Identities=25% Similarity=0.398 Sum_probs=201.5
Q ss_pred hchhhhhhhhhhHHHHHHHHhhcC---CccccchhHhhhhHHHHHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 004588 384 MITDDVQTSREERCFRLWINSLGI---ATYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQASKPPIKMPFRKVENCNQVI 460 (743)
Q Consensus 384 ~~~~d~~~~~q~~~f~~WiN~~~~---~~~v~dl~~Dl~DG~~L~~Lle~ls~~~v~~k~~~~~~~~~~~~~ieN~~~~l 460 (743)
.+-+..|++.|.+||+.|.|+++. ...|.++.+|++||+.|..+++.++|..++- .. .+++|+|++||++.++
T Consensus 18 ~~~~~~~e~~q~kTft~W~~s~L~ir~~s~ie~~e~D~~n~lk~~~l~ev~~~e~l~~--~~--~~~~r~hk~En~~~~l 93 (890)
T KOG0035|consen 18 FLLTPAWEKVQLKTFTKWCNSKLRIRAGSSIEEIEEDFSNGLKLLILLEVISGENLPP--PT--RGKMRVHKLENVNKAL 93 (890)
T ss_pred hhcCccHHHHhccccccccchhhhhcccCccchhhhhhhhhhhhhhhcccccCCccCC--CC--CCccchhhhccccceE
Confidence 334558999999999999999874 4679999999999999999999999998851 12 3378999999999999
Q ss_pred HHHHhhhccccCCCCcccccChhHHHHHHHHHH-HHHHHHhhhhhhcccCCCcccChhHHHHHHhHHhhccCCccccccC
Q 004588 461 KIGKQLKFSLVNVAGNDFVQGNKKLILAFLWQL-MRFNMLQLLKNLRSRSQGKEITDAGILKWANDKVKSTGRTSQMESF 539 (743)
Q Consensus 461 ~~~k~~g~~l~nI~~~DIvdG~~kliL~LlW~L-i~~~i~~~~~~l~~~~~g~~~~~~~LL~W~~~~~~~~~~~~~i~nf 539 (743)
.|.+.-|+.+++|++++|+|||.+++++++|+| .||-+.++... .+....+.||.|||+++..| +.|.|.||
T Consensus 94 ~~~~sk~v~~~~iga~eivd~n~~~~l~~i~tlilr~~i~~is~~------~e~~a~egllLwcq~~Ta~y-~~v~v~nF 166 (890)
T KOG0035|consen 94 VFIESKGVKLVSIGAEEIVDGNLKLTLGLIWTLILRFAIQDISVE------CELSAKEGLLLWCQRKTAPY-SNVNVQNF 166 (890)
T ss_pred EEeccccccccccchhhhcCcchhhhhHHHHHhhccccccchhhh------cchhhhhhhhhheecccCCc-cccccccc
Confidence 999999999999999999999999999999999 57777776543 24446788999999999999 69999999
Q ss_pred CCCCCCChHHHHHHhhhcCCCcee-cccccCCCChHHHHHhHHHHHHHHHH-cCCCcccCcchhcc---CCchHHHHHHH
Q 004588 540 KDKSLSNGLFFLELLSSVEPRVVN-WNLVTKGESDEEKRLNATYIISVARK-LGCSIFLLPEDIME---VNQKMILTLTA 614 (743)
Q Consensus 540 sd~s~~dG~a~~aLl~~~~P~~i~-~~~l~~~~~~~~~~~n~~~a~~~A~~-lGi~~ll~peDi~~---~d~k~iltyls 614 (743)
+ +||+||++|||+||++||++++ |+.+++ .+..+|++.||++|++ +|||++|+++|++. ||++.||||++
T Consensus 167 ~-~sw~~gl~f~A~ih~~Rpdli~~y~~lt~----~~~~~n~~~A~~iAek~l~i~r~ld~ed~~~~~~pde~aimtyv~ 241 (890)
T KOG0035|consen 167 H-TSWKDGLAFCALIHRHRPDLIDQYDKLTK----QDPVENLNLAFDIAEKFLGIPRLLDAEDIVEAAIPDEKAIMTYVS 241 (890)
T ss_pred e-ecccchHHHHHHHHhcChhhhhhhhhcCc----cchhHHhhhhhhhhhhcCCcccccCccccccCCCCchhhhhhhhh
Confidence 9 9999999999999999999999 999998 4788999999999996 99999999999985 79999999999
Q ss_pred HHHHHhhcCC
Q 004588 615 SIMYWSLQQQ 624 (743)
Q Consensus 615 ~~~~~~~~~~ 624 (743)
++|+.|....
T Consensus 242 ~~~~~fSg~~ 251 (890)
T KOG0035|consen 242 SYYHAFSGAE 251 (890)
T ss_pred hccccccCcc
Confidence 9999999766
No 9
>KOG3631 consensus Alpha-parvin and related focal adhesion proteins [Cytoskeleton]
Probab=99.73 E-value=1.6e-17 Score=165.40 Aligned_cols=237 Identities=16% Similarity=0.206 Sum_probs=176.9
Q ss_pred hhhhhHHHHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHHHHHHHHHHcCCCccccccccCCCCChhHHHHHHHHHH
Q 004588 122 ESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCL 201 (743)
Q Consensus 122 ~~e~~~f~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~L~~Lle~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L 201 (743)
++-.+.+..|||..|....+ .|++|.+||.||.+|.+|+|+|.+-++....+.+.. ....|++.-+-.+.
T Consensus 89 ~el~kvLi~WiN~~L~~erI---------vVr~LeEDlfDGqilqkL~ekL~~~klev~evtqse-~~QkqKLq~Vleav 158 (365)
T KOG3631|consen 89 EELVKVLIDWINDVLVPERI---------VVRSLEEDLFDGQILQKLFEKLAALKLEVAEVTQSE-IGQKQKLQTVLEAV 158 (365)
T ss_pred HHHHHHHHHHHHHhhcchhh---------hHHhhHHhhhhhHHHHHHHHHHHhhhccchhhhhhh-HHHHHHHHHHHHHH
Confidence 44567899999999988753 589999999999999999999999988877766652 34557776666666
Q ss_pred HHHHHc-CCeeeecCccccccCchhhHhhhhhhhhhhhhhh----------ccccccCcchh-------------hcc--
Q 004588 202 NSAKAI-GCTVVNIGTQDLVEGRPHLILGLISQIIKIQLLA----------DLNLKKTPQLV-------------ELV-- 255 (743)
Q Consensus 202 ~~~k~~-G~~l~~i~~~DIvdG~~~liLgLiW~LI~~~~l~----------~i~~~~~p~~~-------------~~~-- 255 (743)
+-.-+. ++. ..++++-|.+.+.-.||.|+-.|.+||... .+.+.+..... ..+
T Consensus 159 nr~L~~~~~q-~kWsvdsIh~Kdl~ailhLLVaLa~~frapirlPdnV~v~Vvvvqk~~g~lks~~i~EqlT~~tt~l~~ 237 (365)
T KOG3631|consen 159 NRSLQLPEWQ-AKWSVDSIHNKDLVAILHLLVALAKHFRAPIRLPDNVQVQVVVVQKREGGLKSEKIVEQLTTYTTDLDG 237 (365)
T ss_pred HHHhcCchhh-hccchhhhccchHHHHHHHHHHHHHHcCCCccCCCceEEEEEEEEeccccchHHHHHHHHhhhhHhhcC
Confidence 554332 222 346777888888899999999999888631 11111111100 000
Q ss_pred -cCCchhHHhhcCCh------HHHHHHHHHHHhhhcCCCcccccCCCCCcchHHHHHHHHhhCCCCCCC-----CCCCCC
Q 004588 256 -EDNSDVEELMGLAP------EKVLLKWMNYHLKKAGYEKPVTNFSSDLKDGKAYTYLLNVLAPEHCNP-----ATLDMK 323 (743)
Q Consensus 256 -~~~e~~~~~~~~s~------e~~LL~Wvn~~L~~~~~~~~V~nFssd~~DG~al~~Ll~~~~P~~~~~-----~~l~~~ 323 (743)
...+.++.++...| ++.|+.+||.||.+-+. .|+++.+.|+||..+.-|+..+.+..++. ..-+..
T Consensus 238 ~~~rDaFDtLFd~aPdKln~VK~sli~FvNkhLnklnL--eVt~LdtQFaDGV~LvLL~GlLEgyFvpL~~F~Ltp~S~e 315 (365)
T KOG3631|consen 238 RPERDAFDTLFDHAPDKLNVVKKSLITFVNKHLNKLNL--EVTELDTQFADGVYLVLLMGLLEGYFVPLHHFYLTPNSFE 315 (365)
T ss_pred CCchhhHHHHHhhCcHHHHHHHHHHHHHHHHHhhhccc--eeehhhhhhccchHHHHHHHhhccceeecceeecCCCCHH
Confidence 02234556666655 66799999999998776 59999999999999998888777665532 344557
Q ss_pred CHHHHHHHHHHhhhhcCCc-cccCcccccccCccchHHhHhhhhhhcCC
Q 004588 324 DPTERAKLVLDHAERMDCK-RYLSPKDIVEGSANLNLAFVAQVFHQRSG 371 (743)
Q Consensus 324 ~~~~n~~~a~~~ae~lgi~-~~l~peDi~~~~~d~~l~yls~l~~~~~~ 371 (743)
.+.+|++.||+++++-|+. +...|+||++++.++.+..++.||..|.+
T Consensus 316 ekv~NVsfAfeLm~D~GL~kp~~rpeDIvN~D~KSTLRvLy~LFtKyk~ 364 (365)
T KOG3631|consen 316 EKVHNVSFAFELMKDGGLEKPKVRPEDIVNKDLKSTLRVLYNLFTKYKN 364 (365)
T ss_pred HHHHHHHHHHHHHHccCcCCCCCChHHhhcccHHHHHHHHHHHHHhhcc
Confidence 8899999999999998874 47999999999999999999999988764
No 10
>PF00307 CH: Calponin homology (CH) domain; InterPro: IPR001715 The calponin homology domain (also known as CH-domain) is a superfamily of actin-binding domains found in both cytoskeletal proteins and signal transduction proteins []. It comprises the following groups of actin-binding domains: Actinin-type (including spectrin, fimbrin, ABP-280) (see IPR001589 from INTERPRO). Calponin-type (see IPR000557 from INTERPRO). A comprehensive review of proteins containing this type of actin-binding domains is given in []. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its actin binding activity []. Most proteins have two copies of the CH domain, however some proteins such as calponin and the human vav proto-oncogene (P15498 from SWISSPROT) have only a single copy. The structure of an example CH-domain has recently been solved []. This entry represents the calponin-homology (CH) domain, a superfamily of actin-binding domains found in cytoskeletal proteins (contain two CH domain in tandem repeat), in regulatory proteins from muscle, and in signal transduction proteins. This domain has a core structure consisting of a 4-helical bundle. This domain is found in: Calponin, which is involved in the regulation of contractility and organisation of the actin cytoskeleton in smooth muscle cells []. Beta-spectrin, a major component of a submembrane cytoskeletal network connecting actin filaments to integral plasma membrane proteins []. The actin-cross-linking domain of the fimbrin/plastin family of actin filament bundling or cross-linking proteins []. Utrophin,a close homologue of dystrophin []. Dystrophin, the protein found to be defective in Duchenne muscular dystrophy; this protein contains a tandem repeat of two CH domains []. Actin-binding domain of plectin, a large and widely expressed cytolinker protein []. The N-terminal microtubule-binding domain of microtubule-associated protein eb1 (end-binding protein), a member of a conserved family of proteins that localise to the plus-ends of microtubules []. Ras GTPase-activating-like protein rng2, an IQGAP protein that is essential for the assembly of an actomyosin ring during cytokinesis []. Transgelin, which suppresses androgen receptor transactivation []. ; GO: 0005515 protein binding; PDB: 2DK9_A 1WYL_A 1WKU_B 1TJT_A 3FER_A 2WA7_A 2WA5_A 2WA6_A 2R0O_A 1PXY_A ....
Probab=99.61 E-value=2.2e-15 Score=136.55 Aligned_cols=105 Identities=22% Similarity=0.445 Sum_probs=92.0
Q ss_pred hhHHHHHHhHHhhccCCccccccCCCCCCCChHHHHHHhhhcCCCceecccccCC-CChHHHHHhHHHHHHHHHH-cCCC
Q 004588 516 DAGILKWANDKVKSTGRTSQMESFKDKSLSNGLFFLELLSSVEPRVVNWNLVTKG-ESDEEKRLNATYIISVARK-LGCS 593 (743)
Q Consensus 516 ~~~LL~W~~~~~~~~~~~~~i~nfsd~s~~dG~a~~aLl~~~~P~~i~~~~l~~~-~~~~~~~~n~~~a~~~A~~-lGi~ 593 (743)
+++|++|||.++..++....|+||. ++|+||++||+||+++.|+.+++..+.+. .+.....+|++.++++|++ +|+|
T Consensus 1 e~~ll~Win~~l~~~~~~~~v~~~~-~~l~dG~~L~~Li~~l~p~~i~~~~~~~~~~~~~~~~~Ni~~~l~~~~~~lg~~ 79 (108)
T PF00307_consen 1 EKELLKWINSHLEKYGKGRRVTNFS-EDLRDGVVLCKLINKLFPGTIDLKKINPNLKSPFDKLENIELALEAAEKKLGIP 79 (108)
T ss_dssp HHHHHHHHHHHHTTSTTTSTCSSTS-GGGTTSHHHHHHHHHHSTTSSSGGGSSTSSSSHHHHHHHHHHHHHHHHHHTTSS
T ss_pred CHHHHHHHHHHcccccCCCCcCcHH-HHhcCHHHHHHHHHHHhhccchhhhccccchhhhHHHHHHHHHHHHHHHHcCCC
Confidence 4689999999999885468899997 89999999999999999999999988331 1557899999999999987 9999
Q ss_pred cccCcchhc-cCCchHHHHHHHHHHHHhh
Q 004588 594 IFLLPEDIM-EVNQKMILTLTASIMYWSL 621 (743)
Q Consensus 594 ~ll~peDi~-~~d~k~iltyls~~~~~~~ 621 (743)
..++++|+. .+|++.|+.|+.++|++|.
T Consensus 80 ~~~~~~dl~~~~~~~~vl~~l~~l~~~~e 108 (108)
T PF00307_consen 80 PLLSPEDLVEKGDEKSVLSFLWQLFRYFE 108 (108)
T ss_dssp CTS-HHHHHSTT-HHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHCcCHHHHHHHHHHHHHHHC
Confidence 999999999 8999999999999999873
No 11
>smart00033 CH Calponin homology domain. Actin binding domains present in duplicate at the N-termini of spectrin-like proteins (including dystrophin, alpha-actinin). These domains cross-link actin filaments into bundles and networks. A calponin homology domain is predicted in yeasst Cdc24p.
Probab=99.60 E-value=2.8e-15 Score=134.56 Aligned_cols=102 Identities=33% Similarity=0.578 Sum_probs=90.0
Q ss_pred hhhHHHHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHHHHHHHHHHcCCCccccccccCCCCChhHHHHHHHHHHHH
Q 004588 124 EKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNS 203 (743)
Q Consensus 124 e~~~f~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~L~~Lle~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L~~ 203 (743)
+++++++|||.+++..+ ...+.|+.++|+||++||+|++.+.|+.++.+.+. .+.+++++++|++.++++
T Consensus 1 ~~~~l~~Win~~l~~~~--------~~~v~~~~~~l~dG~~L~~L~~~l~p~~i~~~~~~--~~~~~~~~~~Ni~~~l~~ 70 (103)
T smart00033 1 QEKTLLRWVNSLLAEYG--------KPPVTNFSSDLSDGVALCKLLNSLSPGSVDKKKVN--ASLSRFKKIENINLALSF 70 (103)
T ss_pred ChHHHHHHHHHHcccCC--------CCcHHHHHHHHccHHHHHHHHHHHCCCcCChhhcc--ccccHHHHHHhHHHHHHH
Confidence 36789999999998862 24689999999999999999999999999775544 234588999999999999
Q ss_pred HHHcCCeeeecCccccccCchhhHhhhhhhhhh
Q 004588 204 AKAIGCTVVNIGTQDLVEGRPHLILGLISQIIK 236 (743)
Q Consensus 204 ~k~~G~~l~~i~~~DIvdG~~~liLgLiW~LI~ 236 (743)
+++.|+..+.+.++||++|+ +.+++++|+|++
T Consensus 71 ~~~~g~~~~~~~~~Dl~~~~-k~~~~v~~~l~~ 102 (103)
T smart00033 71 AEKLGGKLVLFEPEDLVEGN-KLILGVIWTLIL 102 (103)
T ss_pred HHHcCCeeeccCHHHHhhcc-hHHHHHHHHHHh
Confidence 99999888999999999999 999999999975
No 12
>cd00014 CH Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like spectrin, alpha-actinin, dystrophin, utrophin, and fimbrin, proteins essential for regulation of cell shape (cortexillins), and signaling proteins (Vav).
Probab=99.58 E-value=4.7e-15 Score=134.26 Aligned_cols=104 Identities=38% Similarity=0.585 Sum_probs=92.5
Q ss_pred hhhHHHHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHHHHHHHHHHcCCCccccccccCCCCChhHHHHHHHHHHHH
Q 004588 124 EKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNS 203 (743)
Q Consensus 124 e~~~f~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~L~~Lle~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L~~ 203 (743)
+++.+++|||.+++.... ..+.|+.++|+||++||+|++.+.|+.+.....+ +.+++++++|++.+|++
T Consensus 2 ~~~~l~~Win~~l~~~~~--------~~v~~~~~~l~dG~~L~~Ll~~~~p~~~~~~~~~---~~~~~~~~~Ni~~~l~~ 70 (107)
T cd00014 2 QKEELLRWINKVLGEYGP--------VTINNFSTDLKDGIALCKLLNSLSPDLIDKKKIN---PLSRFKRLENINLALNF 70 (107)
T ss_pred hHHHHHHHHHHHhccCCC--------ccHHHHHHHHhchHHHHHHHHHHCcccccccccc---ccchhhHHHHHHHHHHH
Confidence 678999999999999741 3589999999999999999999999998664432 34688999999999999
Q ss_pred HHHcCCeeeecCccccc-cCchhhHhhhhhhhhhhh
Q 004588 204 AKAIGCTVVNIGTQDLV-EGRPHLILGLISQIIKIQ 238 (743)
Q Consensus 204 ~k~~G~~l~~i~~~DIv-dG~~~liLgLiW~LI~~~ 238 (743)
++..|++...+.++||+ +||.+.|++++|+|+++|
T Consensus 71 ~~~~gi~~~~~~~~Dl~~~~n~~~vl~~l~~l~~~~ 106 (107)
T cd00014 71 AEKLGVPVVNFDAEDLVEDGDEKLVLGLLWSLIRKF 106 (107)
T ss_pred HHHcCCceeccCHHHHhhCCCceeeHHHHHHHHHhh
Confidence 99999987789999999 999999999999999876
No 13
>smart00033 CH Calponin homology domain. Actin binding domains present in duplicate at the N-termini of spectrin-like proteins (including dystrophin, alpha-actinin). These domains cross-link actin filaments into bundles and networks. A calponin homology domain is predicted in yeasst Cdc24p.
Probab=99.57 E-value=4e-15 Score=133.57 Aligned_cols=98 Identities=36% Similarity=0.566 Sum_probs=87.9
Q ss_pred hHHHHHHHHhhcCC---ccccchhHhhhhHHHHHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHHHHHhhhcccc
Q 004588 395 ERCFRLWINSLGIA---TYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQASKPPIKMPFRKVENCNQVIKIGKQLKFSLV 471 (743)
Q Consensus 395 ~~~f~~WiN~~~~~---~~v~dl~~Dl~DG~~L~~Lle~ls~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~~g~~l~ 471 (743)
++.+++|+|+++.. ..|.|+.++|+||++||+|++.+.|+.++.+.+..+ .+++++++|++.+++++++.|+..+
T Consensus 2 ~~~l~~Win~~l~~~~~~~v~~~~~~l~dG~~L~~L~~~l~p~~i~~~~~~~~--~~~~~~~~Ni~~~l~~~~~~g~~~~ 79 (103)
T smart00033 2 EKTLLRWVNSLLAEYGKPPVTNFSSDLSDGVALCKLLNSLSPGSVDKKKVNAS--LSRFKKIENINLALSFAEKLGGKLV 79 (103)
T ss_pred hHHHHHHHHHHcccCCCCcHHHHHHHHccHHHHHHHHHHHCCCcCChhhcccc--ccHHHHHHhHHHHHHHHHHcCCeee
Confidence 67899999998753 578999999999999999999999999986655433 5789999999999999999998888
Q ss_pred CCCCcccccChhHHHHHHHHHHHH
Q 004588 472 NVAGNDFVQGNKKLILAFLWQLMR 495 (743)
Q Consensus 472 nI~~~DIvdG~~kliL~LlW~Li~ 495 (743)
.+.++||++|+ +.+++++|+|++
T Consensus 80 ~~~~~Dl~~~~-k~~~~v~~~l~~ 102 (103)
T smart00033 80 LFEPEDLVEGN-KLILGVIWTLIL 102 (103)
T ss_pred ccCHHHHhhcc-hHHHHHHHHHHh
Confidence 99999999999 999999999975
No 14
>KOG3631 consensus Alpha-parvin and related focal adhesion proteins [Cytoskeleton]
Probab=99.53 E-value=4.2e-14 Score=141.28 Aligned_cols=218 Identities=19% Similarity=0.337 Sum_probs=157.5
Q ss_pred hHHHHHHHHhhcCCc--cccchhHhhhhHHHHHHHHHHhCCCCccccccCCCCCCChhHH----HHHHHHHHHHHH-hhh
Q 004588 395 ERCFRLWINSLGIAT--YCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQASKPPIKMPFRK----VENCNQVIKIGK-QLK 467 (743)
Q Consensus 395 ~~~f~~WiN~~~~~~--~v~dl~~Dl~DG~~L~~Lle~ls~~~v~~k~~~~~~~~~~~~~----ieN~~~~l~~~k-~~g 467 (743)
.+.+..|||..+... -|.+|.+|+.||.+|-+|+|+|.+-.++...+...... .-|+ +|-+|..|+.-. +.+
T Consensus 92 ~kvLi~WiN~~L~~erIvVr~LeEDlfDGqilqkL~ekL~~~klev~evtqse~~-QkqKLq~Vleavnr~L~~~~~q~k 170 (365)
T KOG3631|consen 92 VKVLIDWINDVLVPERIVVRSLEEDLFDGQILQKLFEKLAALKLEVAEVTQSEIG-QKQKLQTVLEAVNRSLQLPEWQAK 170 (365)
T ss_pred HHHHHHHHHHhhcchhhhHHhhHHhhhhhHHHHHHHHHHHhhhccchhhhhhhHH-HHHHHHHHHHHHHHHhcCchhhhc
Confidence 478999999987654 47999999999999999999999888765555443211 1233 444444444433 466
Q ss_pred ccccCCCCcccccChhHHHHHHHHHH-HHHHHH------------------------hhhhhhcc---cCCCc-------
Q 004588 468 FSLVNVAGNDFVQGNKKLILAFLWQL-MRFNML------------------------QLLKNLRS---RSQGK------- 512 (743)
Q Consensus 468 ~~l~nI~~~DIvdG~~kliL~LlW~L-i~~~i~------------------------~~~~~l~~---~~~g~------- 512 (743)
+++..|...|++. ||.|+-.| +||+-- .+...+.. ..+|+
T Consensus 171 WsvdsIh~Kdl~a-----ilhLLVaLa~~frapirlPdnV~v~Vvvvqk~~g~lks~~i~EqlT~~tt~l~~~~~rDaFD 245 (365)
T KOG3631|consen 171 WSVDSIHNKDLVA-----ILHLLVALAKHFRAPIRLPDNVQVQVVVVQKREGGLKSEKIVEQLTTYTTDLDGRPERDAFD 245 (365)
T ss_pred cchhhhccchHHH-----HHHHHHHHHHHcCCCccCCCceEEEEEEEEeccccchHHHHHHHHhhhhHhhcCCCchhhHH
Confidence 7776676666665 99999999 777621 01111000 00111
Q ss_pred ----------ccChhHHHHHHhHHhhccCCccccccCCCCCCCChHHHHHHhhhcCCCceeccccc-CCCChHHHHHhHH
Q 004588 513 ----------EITDAGILKWANDKVKSTGRTSQMESFKDKSLSNGLFFLELLSSVEPRVVNWNLVT-KGESDEEKRLNAT 581 (743)
Q Consensus 513 ----------~~~~~~LL~W~~~~~~~~~~~~~i~nfsd~s~~dG~a~~aLl~~~~P~~i~~~~l~-~~~~~~~~~~n~~ 581 (743)
...++.|+.+||.++.+.+ .+|+++. +.|+||..+.-|+-.+..-.+....+- ...+.+++.+|.+
T Consensus 246 tLFd~aPdKln~VK~sli~FvNkhLnkln--LeVt~Ld-tQFaDGV~LvLL~GlLEgyFvpL~~F~Ltp~S~eekv~NVs 322 (365)
T KOG3631|consen 246 TLFDHAPDKLNVVKKSLITFVNKHLNKLN--LEVTELD-TQFADGVYLVLLMGLLEGYFVPLHHFYLTPNSFEEKVHNVS 322 (365)
T ss_pred HHHhhCcHHHHHHHHHHHHHHHHHhhhcc--ceeehhh-hhhccchHHHHHHHhhccceeecceeecCCCCHHHHHHHHH
Confidence 1246889999999999875 9999995 999999998888877766555543222 2246788999999
Q ss_pred HHHHHHHHcCC-CcccCcchhccCCchHHHHHHHHHHHHhh
Q 004588 582 YIISVARKLGC-SIFLLPEDIMEVNQKMILTLTASIMYWSL 621 (743)
Q Consensus 582 ~a~~~A~~lGi-~~ll~peDi~~~d~k~iltyls~~~~~~~ 621 (743)
+||++.+.-|. .+-..||||++.|-||.+..++.+|..+.
T Consensus 323 fAfeLm~D~GL~kp~~rpeDIvN~D~KSTLRvLy~LFtKyk 363 (365)
T KOG3631|consen 323 FAFELMKDGGLEKPKVRPEDIVNKDLKSTLRVLYNLFTKYK 363 (365)
T ss_pred HHHHHHHccCcCCCCCChHHhhcccHHHHHHHHHHHHHhhc
Confidence 99999999887 56799999999999999999888876654
No 15
>PF00307 CH: Calponin homology (CH) domain; InterPro: IPR001715 The calponin homology domain (also known as CH-domain) is a superfamily of actin-binding domains found in both cytoskeletal proteins and signal transduction proteins []. It comprises the following groups of actin-binding domains: Actinin-type (including spectrin, fimbrin, ABP-280) (see IPR001589 from INTERPRO). Calponin-type (see IPR000557 from INTERPRO). A comprehensive review of proteins containing this type of actin-binding domains is given in []. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its actin binding activity []. Most proteins have two copies of the CH domain, however some proteins such as calponin and the human vav proto-oncogene (P15498 from SWISSPROT) have only a single copy. The structure of an example CH-domain has recently been solved []. This entry represents the calponin-homology (CH) domain, a superfamily of actin-binding domains found in cytoskeletal proteins (contain two CH domain in tandem repeat), in regulatory proteins from muscle, and in signal transduction proteins. This domain has a core structure consisting of a 4-helical bundle. This domain is found in: Calponin, which is involved in the regulation of contractility and organisation of the actin cytoskeleton in smooth muscle cells []. Beta-spectrin, a major component of a submembrane cytoskeletal network connecting actin filaments to integral plasma membrane proteins []. The actin-cross-linking domain of the fimbrin/plastin family of actin filament bundling or cross-linking proteins []. Utrophin,a close homologue of dystrophin []. Dystrophin, the protein found to be defective in Duchenne muscular dystrophy; this protein contains a tandem repeat of two CH domains []. Actin-binding domain of plectin, a large and widely expressed cytolinker protein []. The N-terminal microtubule-binding domain of microtubule-associated protein eb1 (end-binding protein), a member of a conserved family of proteins that localise to the plus-ends of microtubules []. Ras GTPase-activating-like protein rng2, an IQGAP protein that is essential for the assembly of an actomyosin ring during cytokinesis []. Transgelin, which suppresses androgen receptor transactivation []. ; GO: 0005515 protein binding; PDB: 2DK9_A 1WYL_A 1WKU_B 1TJT_A 3FER_A 2WA7_A 2WA5_A 2WA6_A 2R0O_A 1PXY_A ....
Probab=99.53 E-value=1.4e-14 Score=131.30 Aligned_cols=101 Identities=40% Similarity=0.606 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHhhhcCCCcccccCCCCCcchHHHHHHHHhhCCCCCCCCCCCCC-----CHHHHHHHHHHhhhh-cCCcc
Q 004588 270 EKVLLKWMNYHLKKAGYEKPVTNFSSDLKDGKAYTYLLNVLAPEHCNPATLDMK-----DPTERAKLVLDHAER-MDCKR 343 (743)
Q Consensus 270 e~~LL~Wvn~~L~~~~~~~~V~nFssd~~DG~al~~Ll~~~~P~~~~~~~l~~~-----~~~~n~~~a~~~ae~-lgi~~ 343 (743)
|+.|++|||.++...+...+|+||.++|+||.+||.|++.+.|+.+++..+.+. +..+|++.+++++++ +|++.
T Consensus 1 e~~ll~Win~~l~~~~~~~~v~~~~~~l~dG~~L~~Li~~l~p~~i~~~~~~~~~~~~~~~~~Ni~~~l~~~~~~lg~~~ 80 (108)
T PF00307_consen 1 EKELLKWINSHLEKYGKGRRVTNFSEDLRDGVVLCKLINKLFPGTIDLKKINPNLKSPFDKLENIELALEAAEKKLGIPP 80 (108)
T ss_dssp HHHHHHHHHHHHTTSTTTSTCSSTSGGGTTSHHHHHHHHHHSTTSSSGGGSSTSSSSHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHcccccCCCCcCcHHHHhcCHHHHHHHHHHHhhccchhhhccccchhhhHHHHHHHHHHHHHHHHcCCCC
Confidence 578999999999876434589999999999999999999999999988777433 789999999999999 99999
Q ss_pred ccCccccc-ccCccchHHhHhhhhhhcC
Q 004588 344 YLSPKDIV-EGSANLNLAFVAQVFHQRS 370 (743)
Q Consensus 344 ~l~peDi~-~~~~d~~l~yls~l~~~~~ 370 (743)
.++++||. .++...++.|+++||++|.
T Consensus 81 ~~~~~dl~~~~~~~~vl~~l~~l~~~~e 108 (108)
T PF00307_consen 81 LLSPEDLVEKGDEKSVLSFLWQLFRYFE 108 (108)
T ss_dssp TS-HHHHHSTT-HHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHCcCHHHHHHHHHHHHHHHC
Confidence 99999999 7777899999999999873
No 16
>cd00014 CH Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like spectrin, alpha-actinin, dystrophin, utrophin, and fimbrin, proteins essential for regulation of cell shape (cortexillins), and signaling proteins (Vav).
Probab=99.52 E-value=2e-14 Score=130.11 Aligned_cols=101 Identities=31% Similarity=0.551 Sum_probs=89.2
Q ss_pred hhHHHHHHHHhhcCCc---cccchhHhhhhHHHHHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHHHHHhhhccc
Q 004588 394 EERCFRLWINSLGIAT---YCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQASKPPIKMPFRKVENCNQVIKIGKQLKFSL 470 (743)
Q Consensus 394 q~~~f~~WiN~~~~~~---~v~dl~~Dl~DG~~L~~Lle~ls~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~~g~~l 470 (743)
|++.+++|||.++... .++|+.++|+||++||+|++.+.|+.++++... + ..++++++|++.++++++..|+..
T Consensus 2 ~~~~l~~Win~~l~~~~~~~v~~~~~~l~dG~~L~~Ll~~~~p~~~~~~~~~-~--~~~~~~~~Ni~~~l~~~~~~gi~~ 78 (107)
T cd00014 2 QKEELLRWINKVLGEYGPVTINNFSTDLKDGIALCKLLNSLSPDLIDKKKIN-P--LSRFKRLENINLALNFAEKLGVPV 78 (107)
T ss_pred hHHHHHHHHHHHhccCCCccHHHHHHHHhchHHHHHHHHHHCcccccccccc-c--cchhhHHHHHHHHHHHHHHcCCce
Confidence 6789999999986542 599999999999999999999999998754432 2 578999999999999999999987
Q ss_pred cCCCCcccc-cChhHHHHHHHHHHHHHH
Q 004588 471 VNVAGNDFV-QGNKKLILAFLWQLMRFN 497 (743)
Q Consensus 471 ~nI~~~DIv-dG~~kliL~LlW~Li~~~ 497 (743)
.++.++||+ +||.+.+++++|+|++++
T Consensus 79 ~~~~~~Dl~~~~n~~~vl~~l~~l~~~~ 106 (107)
T cd00014 79 VNFDAEDLVEDGDEKLVLGLLWSLIRKF 106 (107)
T ss_pred eccCHHHHhhCCCceeeHHHHHHHHHhh
Confidence 689999999 999999999999998765
No 17
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.19 E-value=1.1e-10 Score=111.93 Aligned_cols=112 Identities=20% Similarity=0.276 Sum_probs=99.0
Q ss_pred hhcCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhc
Q 004588 15 QSQFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQG 93 (743)
Q Consensus 15 ~~~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~ 93 (743)
.++||++|+++++++|..|| +++|.|+..||..+|+ ++|..+++.++..|+.+++. +.+.|+|.+|+.+|.....
T Consensus 11 ~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr---~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~ 86 (160)
T COG5126 11 FTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILR---SLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLK 86 (160)
T ss_pred cccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHH---HcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhc
Confidence 46899999999999999999 9999999999999999 89999999999999999999 8999999999999977654
Q ss_pred CCC------------CCCCCCCcchHHHHhhhcccccccchhhhhHHHH
Q 004588 94 RAT------------TKPGSAKNSSSFLKASTTTLLHTISESEKASYVA 130 (743)
Q Consensus 94 ~~~------------~~~g~~~~s~~~lk~~~~~~~~~~~~~e~~~f~~ 130 (743)
+.. .+.++|+++.+++......++...++++-....+
T Consensus 87 ~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~ 135 (160)
T COG5126 87 RGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLK 135 (160)
T ss_pred cCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHH
Confidence 333 2237899999999999998888888887766433
No 18
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.17 E-value=1.5e-10 Score=111.86 Aligned_cols=109 Identities=26% Similarity=0.370 Sum_probs=95.7
Q ss_pred CCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhcCC-
Q 004588 18 FTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQGRA- 95 (743)
Q Consensus 18 ~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~~~- 95 (743)
++..+..+++++|..|| +++|+|+..+|..+|+ ++|..++++++..++.++|.|++|.|+|++|+.++.......
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr---~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~ 78 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLR---SLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKT 78 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHH---HcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccc
Confidence 56788999999999999 9999999999999999 899999999999999999999999999999999997654322
Q ss_pred ---------------CCCCCCCCcchHHHHhhhcccccccchhhhhHHH
Q 004588 96 ---------------TTKPGSAKNSSSFLKASTTTLLHTISESEKASYV 129 (743)
Q Consensus 96 ---------------~~~~g~~~~s~~~lk~~~~~~~~~~~~~e~~~f~ 129 (743)
-.+.|+|+++.++++..+...+.+.+.++.....
T Consensus 79 ~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi 127 (151)
T KOG0027|consen 79 DEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMI 127 (151)
T ss_pred cccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHH
Confidence 2233889999999999999999998866666533
No 19
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.13 E-value=1.6e-10 Score=105.86 Aligned_cols=109 Identities=22% Similarity=0.338 Sum_probs=97.1
Q ss_pred CCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCC--CCCccCHHHHHHHHHhhhcC
Q 004588 18 FTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAG--AGDEIDFEAFLRAYINLQGR 94 (743)
Q Consensus 18 ~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d--~dg~I~feeFl~~~~~~~~~ 94 (743)
++.+++.+++++|..|| .++|+|+..++..+|+ ++|.++|+.|+.+.+.+.+.+ +-..|+||+|+-++..+...
T Consensus 5 ~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlR---alG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vakn 81 (152)
T KOG0030|consen 5 FTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLR---ALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKN 81 (152)
T ss_pred cCcchHHHHHHHHHHHhccCcccccHHHHHHHHH---HhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhc
Confidence 56778899999999999 9999999999999999 999999999999999998887 55789999999999887553
Q ss_pred C--------------CCCCCCCCcchHHHHhhhcccccccchhhhhHHH
Q 004588 95 A--------------TTKPGSAKNSSSFLKASTTTLLHTISESEKASYV 129 (743)
Q Consensus 95 ~--------------~~~~g~~~~s~~~lk~~~~~~~~~~~~~e~~~f~ 129 (743)
. -.|+|+|++..++++...++++...+++|-..+.
T Consensus 82 k~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Ll 130 (152)
T KOG0030|consen 82 KDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELL 130 (152)
T ss_pred cccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHH
Confidence 3 4455999999999999999999999999876643
No 20
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.10 E-value=4.1e-10 Score=104.83 Aligned_cols=107 Identities=21% Similarity=0.402 Sum_probs=93.6
Q ss_pred hhhcCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhh
Q 004588 14 LQSQFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQ 92 (743)
Q Consensus 14 l~~~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~ 92 (743)
+-++|+|.++.+++++|..+| |.+|.|+.+||+..+. ++|..+++++++.||+|. .|.|+|.-||.++.+.-
T Consensus 22 vFamf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~a---SlGk~~~d~elDaM~~Ea----~gPINft~FLTmfGekL 94 (171)
T KOG0031|consen 22 VFAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLA---SLGKIASDEELDAMMKEA----PGPINFTVFLTMFGEKL 94 (171)
T ss_pred HHHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHH---HcCCCCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHh
Confidence 446899999999999999999 9999999999999999 899999999999999995 57899999999997644
Q ss_pred cCCCCC------------CCCCCcchHHHHhhhcccccccchhhhhH
Q 004588 93 GRATTK------------PGSAKNSSSFLKASTTTLLHTISESEKAS 127 (743)
Q Consensus 93 ~~~~~~------------~g~~~~s~~~lk~~~~~~~~~~~~~e~~~ 127 (743)
.+..++ +|.|++-...+++..++.+..++++|-..
T Consensus 95 ~gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~ 141 (171)
T KOG0031|consen 95 NGTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDE 141 (171)
T ss_pred cCCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHH
Confidence 433222 37799999999999999999999988554
No 21
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.02 E-value=9e-10 Score=96.22 Aligned_cols=69 Identities=13% Similarity=0.302 Sum_probs=62.9
Q ss_pred HHHHHHHHHhHhhh--CCCCeeeHHhHHHHHHhhhhcCCCCcH-HHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 21 VELRSLKSKFVSIK--NQNGKVTVADLPPVMAKLKAFSTMFTE-EDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 21 ~e~~~l~~~F~~~D--~~~G~I~~~el~~~l~k~~~lg~~~t~-~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
.-+..|+++|+.|| +++|+|+.+||+.+|++ .+|..+++ +++++||+.+|.|+||.|+|+||+++|..+
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~--elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQ--QLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHH--HhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 34778999999999 58999999999999993 38988998 999999999999999999999999999876
No 22
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.99 E-value=1.9e-09 Score=101.19 Aligned_cols=112 Identities=25% Similarity=0.323 Sum_probs=98.6
Q ss_pred hhcCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhc
Q 004588 15 QSQFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQG 93 (743)
Q Consensus 15 ~~~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~ 93 (743)
.+.+++++.++++.+|..|| +++|+|+++||+-+|+ ++|..+..+|+..|+.++|.++.|.|+|++|+++|...-.
T Consensus 24 ~~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmr---alGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~ 100 (172)
T KOG0028|consen 24 KSELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMR---ALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLG 100 (172)
T ss_pred CccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHH---HcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHh
Confidence 45688899999999999999 9999999999999999 8999999999999999999999999999999999865433
Q ss_pred CCCCCC------------CCCCcchHHHHhhhcccccccchhhhhHHH
Q 004588 94 RATTKP------------GSAKNSSSFLKASTTTLLHTISESEKASYV 129 (743)
Q Consensus 94 ~~~~~~------------g~~~~s~~~lk~~~~~~~~~~~~~e~~~f~ 129 (743)
....+. .+|++|.-+++..+.-++.+++.++-+..+
T Consensus 101 e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMI 148 (172)
T KOG0028|consen 101 ERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMI 148 (172)
T ss_pred ccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHH
Confidence 222322 679999999999999999999999888533
No 23
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.95 E-value=1.5e-09 Score=104.14 Aligned_cols=66 Identities=20% Similarity=0.453 Sum_probs=62.7
Q ss_pred HHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHh
Q 004588 22 ELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 22 e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~ 90 (743)
..++|+.+|+.|| +++|+|+..+|+.+++ .+|+.++++|++.|+++++.|++|.|+|++|.+++..
T Consensus 90 ~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~---~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 90 KEEELREAFKLFDKDHDGYISIGELRRVLK---SLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred cHHHHHHHHHHhCCCCCceecHHHHHHHHH---hhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 3578999999999 9999999999999999 8999999999999999999999999999999998754
No 24
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.95 E-value=3.4e-09 Score=92.63 Aligned_cols=67 Identities=13% Similarity=0.257 Sum_probs=62.0
Q ss_pred HHHHHHHHhHhhh--CCCC-eeeHHhHHHHHHhhhh-----cCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 22 ELRSLKSKFVSIK--NQNG-KVTVADLPPVMAKLKA-----FSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 22 e~~~l~~~F~~~D--~~~G-~I~~~el~~~l~k~~~-----lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
-+..++++|+.|| +++| +|+.+||+.+|+ + +|...++++++++++++|.|++|.|+|+||+.++..+
T Consensus 6 ~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~---~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 6 AMVALIDVFHQYSGREGDKHKLKKSELKELIN---NELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHHHhcccCCCcCEECHHHHHHHHH---HHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4678999999996 7899 699999999999 7 7999999999999999999999999999999998765
No 25
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.93 E-value=4.3e-09 Score=93.68 Aligned_cols=72 Identities=19% Similarity=0.229 Sum_probs=66.3
Q ss_pred cCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhc
Q 004588 17 QFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQG 93 (743)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~ 93 (743)
+++++++.+++++|..|| +++|+|+.+||+.+|+ ..| ++++++++|++.+|.+++|.|+|+||+.++..+..
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~---~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~ 75 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILL---KSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYR 75 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHH---HcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHH
Confidence 578899999999999999 9999999999999999 555 78999999999999999999999999999977654
No 26
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.88 E-value=5e-09 Score=86.22 Aligned_cols=61 Identities=21% Similarity=0.406 Sum_probs=53.2
Q ss_pred HHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHH----HHHHHHHHcCCCCCccCHHHHHHHH
Q 004588 25 SLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEED----IKGILAESYAGAGDEIDFEAFLRAY 88 (743)
Q Consensus 25 ~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~e----i~~~i~e~d~d~dg~I~feeFl~~~ 88 (743)
.|+++|+.|| +++|+|+.+||..+++ .++...++++ +..+++.+|.|+||.|+|+||+.+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALK---HLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHH---HTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHH---HhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4789999999 9999999999999999 6886665544 4555999999999999999999876
No 27
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.87 E-value=3.7e-09 Score=102.18 Aligned_cols=65 Identities=20% Similarity=0.433 Sum_probs=62.1
Q ss_pred HHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHh
Q 004588 23 LRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 23 ~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~ 90 (743)
.++++++|+.|| +++|+|+.+||+.+|. .+|+..+.++++.|++++|.|+||.|+|++|+++|..
T Consensus 84 ~~el~eaF~~fD~d~~G~Is~~el~~~l~---~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 84 SEELKEAFRVFDKDGDGFISASELKKVLT---SLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHHHHHHHHccCCCCcCcHHHHHHHHH---HhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 568999999999 9999999999999999 7999999999999999999999999999999999854
No 28
>PF11971 CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 This domain is the N-terminal CH domain from calmodulin-regulated spectrin-associated proteins - CAMSAP proteins.
Probab=98.87 E-value=1.2e-09 Score=94.27 Aligned_cols=78 Identities=23% Similarity=0.361 Sum_probs=65.1
Q ss_pred HHhHHhhccCCccccccCCCCCCCChHHHHHHhhhcCCCceecccccC--CCChHHHHHhHHHHHHHHH-HcCCCc-ccC
Q 004588 522 WANDKVKSTGRTSQMESFKDKSLSNGLFFLELLSSVEPRVVNWNLVTK--GESDEEKRLNATYIISVAR-KLGCSI-FLL 597 (743)
Q Consensus 522 W~~~~~~~~~~~~~i~nfsd~s~~dG~a~~aLl~~~~P~~i~~~~l~~--~~~~~~~~~n~~~a~~~A~-~lGi~~-ll~ 597 (743)
|++.++..++ +.|.||+ .||+||+++|+|||+|+|.+++++.+.- ..|-.+...|.+...+.+. +||... -++
T Consensus 1 ~~~~~~~~~~--~~v~dl~-~~l~DG~~Lc~Lih~Y~P~~l~~~~I~~~~~mS~~~~l~N~~ll~~~c~~~l~~~~~~l~ 77 (85)
T PF11971_consen 1 WVNARCAPYF--PPVEDLT-QDLSDGRALCALIHFYCPQLLPLEDICLKTTMSQADSLYNLQLLNSFCQSHLGFSCCHLE 77 (85)
T ss_pred CCCcccCCCC--cchhhhh-hhhccHHHHHHHHHHhCcceecHhHcccccchHHHHhhhhHHHHHHHHHHHcCCCcCcCC
Confidence 6667666664 8899998 8999999999999999999999988873 3356788899999999995 687754 469
Q ss_pred cchhc
Q 004588 598 PEDIM 602 (743)
Q Consensus 598 peDi~ 602 (743)
||||.
T Consensus 78 ~edl~ 82 (85)
T PF11971_consen 78 PEDLL 82 (85)
T ss_pred HHHHh
Confidence 99985
No 29
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.84 E-value=1.7e-08 Score=88.17 Aligned_cols=71 Identities=11% Similarity=0.243 Sum_probs=62.8
Q ss_pred HHHHHHHHHhHhhh--CC-CCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 21 VELRSLKSKFVSIK--NQ-NGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 21 ~e~~~l~~~F~~~D--~~-~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
..+..+.+.|+.|| ++ +|+|+.+||+.+|++..++|..++++++.+|++++|.|++|.|+|+||+.++..+
T Consensus 7 ~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 7 QAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 44678999999999 56 7899999999999731147999999999999999999999999999999999776
No 30
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.82 E-value=8e-09 Score=97.09 Aligned_cols=66 Identities=20% Similarity=0.377 Sum_probs=62.9
Q ss_pred HHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHh
Q 004588 22 ELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 22 e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~ 90 (743)
..++++.+|+.|| +++|+|+..+|+.+++ .||+++|++|+.+||+|+|.|++|.|+-+||+++|.+
T Consensus 104 t~eEi~~afrl~D~D~~Gkis~~~lkrvak---eLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 104 TKEEIKKAFRLFDDDKTGKISQRNLKRVAK---ELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred cHHHHHHHHHcccccCCCCcCHHHHHHHHH---HhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 4678999999999 9999999999999999 7999999999999999999999999999999999864
No 31
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.80 E-value=2.2e-08 Score=88.57 Aligned_cols=67 Identities=16% Similarity=0.299 Sum_probs=58.7
Q ss_pred HHHHHHHhHhhh--CCCC-eeeHHhHHHHHHhhhhc----CCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 23 LRSLKSKFVSIK--NQNG-KVTVADLPPVMAKLKAF----STMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 23 ~~~l~~~F~~~D--~~~G-~I~~~el~~~l~k~~~l----g~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
+..++++|+.|| +++| +|+.+||+.+|++ .+ +...++.++++|++++|.|+||.|+|+||+.++..+
T Consensus 9 ~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~--~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 9 MDTLIRIFHNYSGKEGDRYKLSKGELKELLQR--ELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHHccCCCCCEECHHHHHHHHHH--HhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 678999999999 6888 5999999999984 23 334578899999999999999999999999999876
No 32
>KOG2046 consensus Calponin [Cytoskeleton]
Probab=98.79 E-value=2.7e-08 Score=97.07 Aligned_cols=110 Identities=29% Similarity=0.418 Sum_probs=85.4
Q ss_pred CCCCCcchHHHHhhhcccccccchhhhhHHHHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHHHHHHHHHHcCCCcc
Q 004588 99 PGSAKNSSSFLKASTTTLLHTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTID 178 (743)
Q Consensus 99 ~g~~~~s~~~lk~~~~~~~~~~~~~e~~~f~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~L~~Lle~l~~~~i~ 178 (743)
.|..++.+.+++... ..+++.++++....||...+.... +.-.|+.+.|+||++||+|+|+|.|+..
T Consensus 4 ~~~~~gl~~~v~~k~---~~k~~~~~~~el~~WI~~~~~~~~---------~~~~~f~~~LKDG~iLCkl~N~l~p~~~- 70 (193)
T KOG2046|consen 4 RGPSYGLSREVQQKI---ESKYDDELEKELREWIENVVLTEL---------PARGDFQDLLKDGVILCKLINKLYPGVV- 70 (193)
T ss_pred CCCccchHHHHHHHh---hcccCHHHHHHHHHHHHHhhccCC---------CcccCHHHHHcchHHHHHHHHHhCcCcc-
Confidence 345555566665544 459999999999999999744431 1357899999999999999999999332
Q ss_pred ccccccCCCCChhHHHHHHHHHHHHHHHcCCeeee-cCccccccCch
Q 004588 179 ERAINTKRVINPWERNENHTLCLNSAKAIGCTVVN-IGTQDLVEGRP 224 (743)
Q Consensus 179 ~~~i~~~~~~~~~~~~eNv~~~L~~~k~~G~~l~~-i~~~DIvdG~~ 224 (743)
+.+| + +...|.++||+..++.+++..|++-++ +.+.|+++|..
T Consensus 71 -~~~~-~-s~~~f~qmEnIs~Fi~a~~~ygv~~~d~FqtvDLfE~kd 114 (193)
T KOG2046|consen 71 -KKIN-E-SKMAFVQMENISNFIKAAKKYGVPEVDLFQTVDLFEGKD 114 (193)
T ss_pred -cccc-c-ccccHHHHHHHHHHHHHHHhcCCChhhcccccccccCCC
Confidence 2334 2 345899999999999999999998877 57889999864
No 33
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.75 E-value=3.8e-08 Score=87.24 Aligned_cols=70 Identities=17% Similarity=0.278 Sum_probs=59.7
Q ss_pred HHHHHHHHhHhhh--CC-CCeeeHHhHHHHHHh-hh-hcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 22 ELRSLKSKFVSIK--NQ-NGKVTVADLPPVMAK-LK-AFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 22 e~~~l~~~F~~~D--~~-~G~I~~~el~~~l~k-~~-~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
-+..++++|..|| ++ +|+|+.+||+.+|+. +. .+|..+++++++.+++++|.+++|.|+|++|+.++..+
T Consensus 6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3567999999998 55 699999999999982 00 05778899999999999999999999999999988653
No 34
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.72 E-value=5.9e-08 Score=85.62 Aligned_cols=67 Identities=18% Similarity=0.315 Sum_probs=58.8
Q ss_pred HHHHHHHhHhh-h-CCCC-eeeHHhHHHHHHhhhhcC----CCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 23 LRSLKSKFVSI-K-NQNG-KVTVADLPPVMAKLKAFS----TMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 23 ~~~l~~~F~~~-D-~~~G-~I~~~el~~~l~k~~~lg----~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
++.++++|..| | +++| +|+.+||+.+|++ .+| ..+++++++++++++|.|++|.|+|++|+.++..+
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~--~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQT--ELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHH--HHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 47899999999 5 8999 5999999999983 244 35689999999999999999999999999998765
No 35
>PTZ00184 calmodulin; Provisional
Probab=98.66 E-value=1.2e-07 Score=90.22 Aligned_cols=99 Identities=23% Similarity=0.345 Sum_probs=80.1
Q ss_pred hhcCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhc
Q 004588 15 QSQFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQG 93 (743)
Q Consensus 15 ~~~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~ 93 (743)
..++++.+.+++++.|..+| +++|.|+.+||..++. .+|..++.+++..+++.+|.+++|.|+|++|+.++.....
T Consensus 2 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~---~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~ 78 (149)
T PTZ00184 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR---SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMK 78 (149)
T ss_pred CCccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHH---HhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhcc
Confidence 46789999999999999999 9999999999999998 6888889999999999999999999999999998865422
Q ss_pred CC------------CCCCCCCCcchHHHHhhhccc
Q 004588 94 RA------------TTKPGSAKNSSSFLKASTTTL 116 (743)
Q Consensus 94 ~~------------~~~~g~~~~s~~~lk~~~~~~ 116 (743)
.. -...|.|+++...++......
T Consensus 79 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~ 113 (149)
T PTZ00184 79 DTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNL 113 (149)
T ss_pred CCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHH
Confidence 11 122355666666666554443
No 36
>PTZ00183 centrin; Provisional
Probab=98.64 E-value=2.2e-07 Score=89.67 Aligned_cols=74 Identities=20% Similarity=0.354 Sum_probs=68.5
Q ss_pred hhcCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 15 QSQFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 15 ~~~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
-..+++.+..+++++|..|| +++|+|+..||..+++ .+|..++..++..++..+|.+++|.|+|++|+.++...
T Consensus 8 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~---~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~ 82 (158)
T PTZ00183 8 RPGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMR---SLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKK 82 (158)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHH---HhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 34689999999999999999 9999999999999999 68988899999999999999999999999999987654
No 37
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.59 E-value=1.6e-07 Score=81.99 Aligned_cols=70 Identities=13% Similarity=0.308 Sum_probs=61.1
Q ss_pred HHHHHHHHHHhHhhh-C--CCCeeeHHhHHHHHHhhhhcCCCC----cHHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 20 QVELRSLKSKFVSIK-N--QNGKVTVADLPPVMAKLKAFSTMF----TEEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 20 ~~e~~~l~~~F~~~D-~--~~G~I~~~el~~~l~k~~~lg~~~----t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
+.++++++++|..|| + ++|+|+.++|+.+++. .+|..+ ++++++.|++++|.+++|.|+|++|+.++..+
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~--~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLET--ELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHH--HhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 457889999999999 4 8999999999999983 256544 59999999999999999999999999998765
No 38
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.58 E-value=2.4e-07 Score=81.12 Aligned_cols=69 Identities=13% Similarity=0.220 Sum_probs=59.6
Q ss_pred HHHHHHHHHhHh-hh-CCCC-eeeHHhHHHHHHhhhhc----CCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 21 VELRSLKSKFVS-IK-NQNG-KVTVADLPPVMAKLKAF----STMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 21 ~e~~~l~~~F~~-~D-~~~G-~I~~~el~~~l~k~~~l----g~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
..+..|..+|+. +| +++| +|+.+||+.+|.+ .+ +....+.++.++++++|.|+||.|+|+||++++..+
T Consensus 6 ~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~--e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 6 RCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNT--ELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHH--hhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 347789999999 66 7876 9999999999995 32 445678899999999999999999999999999876
No 39
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.57 E-value=1.5e-07 Score=77.23 Aligned_cols=62 Identities=15% Similarity=0.212 Sum_probs=55.8
Q ss_pred HHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhh
Q 004588 26 LKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQ 92 (743)
Q Consensus 26 l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~ 92 (743)
++++|..+| +++|.|+.+|+..+|+ .+| +++++++++++.+|.+++|.|+|+||+.++..+.
T Consensus 1 ~~~~F~~~D~~~~G~i~~~el~~~l~---~~g--~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~~ 63 (67)
T cd00052 1 YDQIFRSLDPDGDGLISGDEARPFLG---KSG--LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLIA 63 (67)
T ss_pred ChHHHHHhCCCCCCcCcHHHHHHHHH---HcC--CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence 367899999 9999999999999999 566 4889999999999999999999999999886543
No 40
>PF14658 EF-hand_9: EF-hand domain
Probab=98.50 E-value=3.1e-07 Score=74.64 Aligned_cols=61 Identities=20% Similarity=0.389 Sum_probs=57.1
Q ss_pred HHhHhhh-CCCCeeeHHhHHHHHHhhhhcCC-CCcHHHHHHHHHHHcCCCC-CccCHHHHHHHHHhh
Q 004588 28 SKFVSIK-NQNGKVTVADLPPVMAKLKAFST-MFTEEDIKGILAESYAGAG-DEIDFEAFLRAYINL 91 (743)
Q Consensus 28 ~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~-~~t~~ei~~~i~e~d~d~d-g~I~feeFl~~~~~~ 91 (743)
.+|..|| ++.|.|.+.+|..+|+ ++|. .+++.+++++.+++|+++. |.|+|+.|+.+|.+.
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lr---a~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~w 65 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLR---AVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRDW 65 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHH---HHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHHh
Confidence 4799999 9999999999999999 8988 9999999999999999988 999999999999753
No 41
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.48 E-value=4.1e-07 Score=71.69 Aligned_cols=52 Identities=17% Similarity=0.400 Sum_probs=49.1
Q ss_pred CCCeeeHHhHHHHHHhhhhcCCC-CcHHHHHHHHHHHcCCCCCccCHHHHHHHHHh
Q 004588 36 QNGKVTVADLPPVMAKLKAFSTM-FTEEDIKGILAESYAGAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 36 ~~G~I~~~el~~~l~k~~~lg~~-~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~ 90 (743)
++|+|+.++|+.+|. .+|.. ++++++..++..+|.|++|.|+|+||+.++..
T Consensus 1 ~~G~i~~~~~~~~l~---~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALS---KLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHH---HTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHH---HhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 479999999999997 68999 99999999999999999999999999999865
No 42
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.46 E-value=6.7e-07 Score=86.95 Aligned_cols=79 Identities=16% Similarity=0.340 Sum_probs=72.9
Q ss_pred cCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhcCC
Q 004588 17 QFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQGRA 95 (743)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~~~ 95 (743)
.|++.++..+...|..|| +.||+|+..||+.+|.| +|.+-|---+++||.++|.|.||+|+|-||+-++....++.
T Consensus 92 eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEK---LgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaagE 168 (244)
T KOG0041|consen 92 EFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEK---LGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAAGE 168 (244)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHH---hCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhccc
Confidence 689999999999999999 99999999999999995 89999999999999999999999999999999998776655
Q ss_pred CCC
Q 004588 96 TTK 98 (743)
Q Consensus 96 ~~~ 98 (743)
..+
T Consensus 169 L~~ 171 (244)
T KOG0041|consen 169 LQE 171 (244)
T ss_pred ccc
Confidence 444
No 43
>PF11971 CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 This domain is the N-terminal CH domain from calmodulin-regulated spectrin-associated proteins - CAMSAP proteins.
Probab=98.44 E-value=5.5e-08 Score=83.95 Aligned_cols=67 Identities=22% Similarity=0.400 Sum_probs=56.3
Q ss_pred CCcccccCCCCCcchHHHHHHHHhhCCCCCCCCC------CCCCCHHHHHHHHHHhhhh-cCCcc-ccCcccccc
Q 004588 286 YEKPVTNFSSDLKDGKAYTYLLNVLAPEHCNPAT------LDMKDPTERAKLVLDHAER-MDCKR-YLSPKDIVE 352 (743)
Q Consensus 286 ~~~~V~nFssd~~DG~al~~Ll~~~~P~~~~~~~------l~~~~~~~n~~~a~~~ae~-lgi~~-~l~peDi~~ 352 (743)
+...|.||+.||+||.++|+|||+|.|..+++.. .+..+...|.+.+.+.+++ +|... .++|||+..
T Consensus 9 ~~~~v~dl~~~l~DG~~Lc~Lih~Y~P~~l~~~~I~~~~~mS~~~~l~N~~ll~~~c~~~l~~~~~~l~~edl~~ 83 (85)
T PF11971_consen 9 YFPPVEDLTQDLSDGRALCALIHFYCPQLLPLEDICLKTTMSQADSLYNLQLLNSFCQSHLGFSCCHLEPEDLLY 83 (85)
T ss_pred CCcchhhhhhhhccHHHHHHHHHHhCcceecHhHcccccchHHHHhhhhHHHHHHHHHHHcCCCcCcCCHHHHhc
Confidence 3357999999999999999999999999997743 3456778999999999987 87765 579999764
No 44
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.36 E-value=1.1e-06 Score=76.81 Aligned_cols=68 Identities=13% Similarity=0.318 Sum_probs=60.3
Q ss_pred HHHHHHHHhHhhh-C--CCCeeeHHhHHHHHHhhhhcCCCCc----HHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 22 ELRSLKSKFVSIK-N--QNGKVTVADLPPVMAKLKAFSTMFT----EEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 22 e~~~l~~~F~~~D-~--~~G~I~~~el~~~l~k~~~lg~~~t----~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
-+..+...|..++ + ++|+|+.+||+.+|.+ .+|..++ ++++++|++++|.|++|.|+|+||+.++..+
T Consensus 6 ~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~--~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 6 AIETIINVFHQYSVRKGHPDTLYKKEFKQLVEK--ELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHHHhccCCCcccCCHHHHHHHHHH--HhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 4677899999999 5 4799999999999974 5777777 9999999999999999999999999999765
No 45
>KOG0518 consensus Actin-binding cytoskeleton protein, filamin [Cytoskeleton]
Probab=98.27 E-value=6.7e-09 Score=121.28 Aligned_cols=194 Identities=15% Similarity=0.017 Sum_probs=139.7
Q ss_pred ChhhHHHHhhhhHHHHHHHHHHcCCCccccccccCCCCChhHHHHHHHHHHHHHHHcCCeeeecCccccccCchhhHhhh
Q 004588 151 TTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLILGL 230 (743)
Q Consensus 151 ~v~dl~~dl~DGv~L~~Lle~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L~~~k~~G~~l~~i~~~DIvdG~~~liLgL 230 (743)
.+.+|..++.||+.|..+++++... +..+++++.+ -+|+.+|+..+++.....+..++||+..+|++++.++++++
T Consensus 45 ~~~slk~~~~dg~~~p~~v~vl~~~--~~skv~~~~p--~~q~~~~v~~a~~~ft~d~r~~~nigs~hivd~v~~~~g~~ 120 (1113)
T KOG0518|consen 45 YILSLKYDGSDGVNLPSLVQVLSAV--DTSKVKKKGP--GIQGLHNVREALNKFTVDNRKETNIGSAHIVDHVVKLIGSL 120 (1113)
T ss_pred eeEEEEecCccccccceeeEEeecc--ccceeEEecC--CccCcchhhhhhhhhhhccceeeccCCcccccccccccccc
Confidence 5678999999999999999999866 3344555433 26899999999999988789999999999999999999999
Q ss_pred hhhhhhhhhhhccccccCcchhhcccCCchhHHhhcCChHHHHHHHHHHHhhhcCCCcccccCCCCCcchHHHHHHHHhh
Q 004588 231 ISQIIKIQLLADLNLKKTPQLVELVEDNSDVEELMGLAPEKVLLKWMNYHLKKAGYEKPVTNFSSDLKDGKAYTYLLNVL 310 (743)
Q Consensus 231 iW~LI~~~~l~~i~~~~~p~~~~~~~~~e~~~~~~~~s~e~~LL~Wvn~~L~~~~~~~~V~nFssd~~DG~al~~Ll~~~ 310 (743)
+|.++.++....-..+..| .+......+.++..|-... ...+.+.||++||.||+||..++...
T Consensus 121 ~~~~v~~~~dg~y~~k~~p------------~e~~~h~~e~~~~e~~~~~----sP~~~~v~~~td~n~~~Alg~~le~~ 184 (1113)
T KOG0518|consen 121 TWTLVQDYGDGIYKTKRTP------------KEKGEHEVEVLYDEKPVPA----SPFVVKVNEGTDWNDVQALGPGLESA 184 (1113)
T ss_pred eeEeeeccCCcceeeecCc------------hhccchhhhhhhccccccc----CCceeccccccCcccceEeccchhhc
Confidence 9999988732111111111 0001112334445554322 22246899999999999999999999
Q ss_pred CCCCC-CCCCCCCCCHHHHHHHHHHhhhh-cCCccccCc----ccccccCcc--chHHhHhh
Q 004588 311 APEHC-NPATLDMKDPTERAKLVLDHAER-MDCKRYLSP----KDIVEGSAN--LNLAFVAQ 364 (743)
Q Consensus 311 ~P~~~-~~~~l~~~~~~~n~~~a~~~ae~-lgi~~~l~p----eDi~~~~~d--~~l~yls~ 364 (743)
+++.. .|..........|++.+++.+.+ +-..+.+.+ -.+....++ ++++|+..
T Consensus 185 ~vg~p~~f~v~~~Ga~~gnl~~a~~gpse~~~~~~di~~g~c~veyip~~~gd~sv~~~~gg 246 (1113)
T KOG0518|consen 185 RVGKPNVFEVETPGAGQGNLEVAVEGPSEALTVIPDIKPGSCSVEYIPPEPGDYSVNTYYGG 246 (1113)
T ss_pred ccCCCceeEEecCCccccceeeeecChhhhcccccccCCCcceeeecCCCCCceEEeeeecc
Confidence 99987 45666667778899999999987 333444555 444445554 67777765
No 46
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.23 E-value=3e-06 Score=67.08 Aligned_cols=60 Identities=23% Similarity=0.483 Sum_probs=56.4
Q ss_pred HHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHH
Q 004588 26 LKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAY 88 (743)
Q Consensus 26 l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~ 88 (743)
++.+|..+| +++|.|+..|+..+++ .+|...+.+++..++..++.+++|.|+|++|+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALK---SLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHH---HhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 678899999 9999999999999999 68999999999999999999999999999998765
No 47
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.23 E-value=2.1e-06 Score=79.14 Aligned_cols=69 Identities=22% Similarity=0.376 Sum_probs=61.1
Q ss_pred cCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Q 004588 17 QFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYI 89 (743)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~ 89 (743)
+-.+...+++.+-++.|| +++|.|...||+++|. ++|+.++++|+++++.-. .|++|.|+||.|++.+.
T Consensus 81 nk~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLt---tlGekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 81 NKDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLT---TLGEKLTEEEVEELLAGQ-EDSNGCINYEAFVKHIM 150 (152)
T ss_pred ccccCcHHHHHHHHHhhcccCCcceeHHHHHHHHH---HHHhhccHHHHHHHHccc-cccCCcCcHHHHHHHHh
Confidence 334455788999999999 9999999999999999 799999999999999875 57899999999998764
No 48
>PLN02964 phosphatidylserine decarboxylase
Probab=98.16 E-value=4.5e-06 Score=97.03 Aligned_cols=93 Identities=17% Similarity=0.144 Sum_probs=77.7
Q ss_pred hcCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcC-CCCcHHH---HHHHHHHHcCCCCCccCHHHHHHHHHh
Q 004588 16 SQFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFS-TMFTEED---IKGILAESYAGAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 16 ~~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg-~~~t~~e---i~~~i~e~d~d~dg~I~feeFl~~~~~ 90 (743)
..|++.|+++++++|..|| +++|++ |+.+++ ++| ..+++++ ++++++.+|.|++|.|+|+||+.+|..
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilr---slG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~ 207 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIFV---SCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKA 207 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHH---HhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 3578889999999999999 999997 899999 899 5899887 899999999999999999999999987
Q ss_pred hhcCCC-----------CCCCCCCcchHHHHhhhcc
Q 004588 91 LQGRAT-----------TKPGSAKNSSSFLKASTTT 115 (743)
Q Consensus 91 ~~~~~~-----------~~~g~~~~s~~~lk~~~~~ 115 (743)
+....+ .++++|+++..+++..+..
T Consensus 208 lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 208 FGNLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred hccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 643222 2336778888888777654
No 49
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.13 E-value=5.5e-06 Score=77.71 Aligned_cols=64 Identities=17% Similarity=0.331 Sum_probs=61.2
Q ss_pred HHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Q 004588 23 LRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYI 89 (743)
Q Consensus 23 ~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~ 89 (743)
.+.+..+|..|| +++|.|..+.|+.+|. ++|..++++|+++|++.+-.|..|.|+|.+|..++.
T Consensus 100 e~~I~~AF~~FD~~~~G~I~~d~lre~Lt---t~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 100 EEVILNAFKTFDDEGSGKIDEDYLRELLT---TMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHHHHHHHhcCccCCCccCHHHHHHHHH---HhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 357999999999 9999999999999999 899999999999999999999999999999999986
No 50
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=98.13 E-value=1.7e-05 Score=85.35 Aligned_cols=114 Identities=14% Similarity=0.169 Sum_probs=95.8
Q ss_pred CCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCC-CcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhc--
Q 004588 18 FTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTM-FTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQG-- 93 (743)
Q Consensus 18 ~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~-~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~-- 93 (743)
.+.+...+++..|+.|| +++|.++.++|.+.+. +++.+ ...+-.+.+++.+|.|.||.+||+||.+.+..-..
T Consensus 8 ~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~---~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E~~l 84 (463)
T KOG0036|consen 8 TDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLE---KLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKELEL 84 (463)
T ss_pred CcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHH---hcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHhHHHH
Confidence 34445567999999999 9999999999999999 56665 66777788999999999999999999998864322
Q ss_pred ----CCCCCCCCCCcchHHHHhhhcccccccchhhhhHHHHHHHh
Q 004588 94 ----RATTKPGSAKNSSSFLKASTTTLLHTISESEKASYVAHINS 134 (743)
Q Consensus 94 ----~~~~~~g~~~~s~~~lk~~~~~~~~~~~~~e~~~f~~WIN~ 134 (743)
.....+-+|.+...++......++-.++.++...|.+|+-.
T Consensus 85 ~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~ 129 (463)
T KOG0036|consen 85 YRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDK 129 (463)
T ss_pred HHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhcc
Confidence 34555678999999999999999999999999999988754
No 51
>PTZ00183 centrin; Provisional
Probab=98.09 E-value=8.4e-06 Score=78.54 Aligned_cols=64 Identities=20% Similarity=0.390 Sum_probs=57.1
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHh
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~ 90 (743)
+.++.+|+.+| +++|+|+..|+..++. .+|..++++++.+++..+|.|++|.|+|++|+.++..
T Consensus 90 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~---~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 90 EEILKAFRLFDDDKTGKISLKNLKRVAK---ELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHH---HhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 46888899999 9999999999999998 6788899999999999999999999999999988865
No 52
>KOG0518 consensus Actin-binding cytoskeleton protein, filamin [Cytoskeleton]
Probab=98.08 E-value=1.3e-08 Score=118.91 Aligned_cols=206 Identities=13% Similarity=0.034 Sum_probs=147.7
Q ss_pred HHHHHHHHhhcCCccccchhHhhhhHHHHHHHHHHhCCCCccccccC-CCCCCChhHHHHHHHHHHHHHHhhhccccCCC
Q 004588 396 RCFRLWINSLGIATYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQAS-KPPIKMPFRKVENCNQVIKIGKQLKFSLVNVA 474 (743)
Q Consensus 396 ~~f~~WiN~~~~~~~v~dl~~Dl~DG~~L~~Lle~ls~~~v~~k~~~-~~~~~~~~~~ieN~~~~l~~~k~~g~~l~nI~ 474 (743)
.||+.|++-+.....+.+|..|+.||..|..+++.++.... ..+. +.|+ ++.++|++.++......+...+||+
T Consensus 31 ~T~~~t~~~~~aG~~~~slk~~~~dg~~~p~~v~vl~~~~~--skv~~~~p~---~q~~~~v~~a~~~ft~d~r~~~nig 105 (1113)
T KOG0518|consen 31 GTVTVTYDPQRAGFYILSLKYDGSDGVNLPSLVQVLSAVDT--SKVKKKGPG---IQGLHNVREALNKFTVDNRKETNIG 105 (1113)
T ss_pred ceEEEEEccccCcceeEEEEecCccccccceeeEEeecccc--ceeEEecCC---ccCcchhhhhhhhhhhccceeeccC
Confidence 44555555566667788999999999999999999987644 2333 2342 7999999999998886668889999
Q ss_pred CcccccChhHHHHHHHHHHHHHHHHhhhhhhccc-CCCcccChhHHHHHHhHHhhccCCccccccCCCCCCCChHHHHHH
Q 004588 475 GNDFVQGNKKLILAFLWQLMRFNMLQLLKNLRSR-SQGKEITDAGILKWANDKVKSTGRTSQMESFKDKSLSNGLFFLEL 553 (743)
Q Consensus 475 ~~DIvdG~~kliL~LlW~Li~~~i~~~~~~l~~~-~~g~~~~~~~LL~W~~~~~~~~~~~~~i~nfsd~s~~dG~a~~aL 553 (743)
+.+|++++.+++++++|.++..+...+.+-.+.. ..|+...+-.+..|-...+ +.+.+.+|. ++|.+|+|+-++
T Consensus 106 s~hivd~v~~~~g~~~~~~v~~~~dg~y~~k~~p~e~~~h~~e~~~~e~~~~~s----P~~~~v~~~-td~n~~~Alg~~ 180 (1113)
T KOG0518|consen 106 SAHIVDHVVKLIGSLTWTLVQDYGDGIYKTKRTPKEKGEHEVEVLYDEKPVPAS----PFVVKVNEG-TDWNDVQALGPG 180 (1113)
T ss_pred CcccccccccccccceeEeeeccCCcceeeecCchhccchhhhhhhcccccccC----Cceeccccc-cCcccceEeccc
Confidence 9999999999999999999754433222110000 1121212233455543322 346789999 999999999999
Q ss_pred hhhcCCCce-ecccccCCCChHHHHHhHHHHHHHHHHc-CCCcccCc----chhc--cCCchHHHHHHHH
Q 004588 554 LSSVEPRVV-NWNLVTKGESDEEKRLNATYIISVARKL-GCSIFLLP----EDIM--EVNQKMILTLTAS 615 (743)
Q Consensus 554 l~~~~P~~i-~~~~l~~~~~~~~~~~n~~~a~~~A~~l-Gi~~ll~p----eDi~--~~d~k~iltyls~ 615 (743)
+..-+|+.. .|....++ ....|+..|++-+.++ -.++...+ -++. ++++.++++|++.
T Consensus 181 le~~~vg~p~~f~v~~~G----a~~gnl~~a~~gpse~~~~~~di~~g~c~veyip~~~gd~sv~~~~gg 246 (1113)
T KOG0518|consen 181 LESARVGKPNVFEVETPG----AGQGNLEVAVEGPSEALTVIPDIKPGSCSVEYIPPEPGDYSVNTYYGG 246 (1113)
T ss_pred hhhcccCCCceeEEecCC----ccccceeeeecChhhhcccccccCCCcceeeecCCCCCceEEeeeecc
Confidence 999999987 56666664 3467899999999654 34555665 3444 4799999999987
No 53
>PTZ00184 calmodulin; Provisional
Probab=98.05 E-value=1.2e-05 Score=76.35 Aligned_cols=63 Identities=22% Similarity=0.502 Sum_probs=58.1
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYI 89 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~ 89 (743)
..++.+|..|| +++|+|+.+|+..++. .+|..++++++..++..+|.+++|.|+|+||+.++.
T Consensus 84 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~---~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 84 EEIKEAFKVFDRDGNGFISAAELRHVMT---NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHHhhCCCCCCeEeHHHHHHHHH---HHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 56889999999 9999999999999998 688889999999999999999999999999998874
No 54
>COG5199 SCP1 Calponin [Cytoskeleton]
Probab=98.03 E-value=8.6e-06 Score=75.49 Aligned_cols=107 Identities=23% Similarity=0.334 Sum_probs=84.0
Q ss_pred ccccchhhhhHHHHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHHHHHHHHHHcCCCccccccccCCCCChhHHHHH
Q 004588 117 LHTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNEN 196 (743)
Q Consensus 117 ~~~~~~~e~~~f~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~L~~Lle~l~~~~i~~~~i~~~~~~~~~~~~eN 196 (743)
..+...++.+..+-||...|.+.- . .-.||.+.|+||++||++++...+..|.++. ...+|-.+||
T Consensus 7 ~~~~~~~~~kev~~Wie~~l~~k~--------~-ppgdll~~lkdGv~lCril~ea~~~~I~yKe-----SkmpFVQmen 72 (178)
T COG5199 7 RCPGMDKQQKEVTLWIETVLGEKF--------E-PPGDLLSLLKDGVRLCRILNEASPLDIKYKE-----SKMPFVQMEN 72 (178)
T ss_pred cCCCCHHHHHHHHHHHHHHHHhhh--------C-CcccHHHHHhcchHHHHHHhhcCcccceecc-----cCCceeeHHH
Confidence 345677888999999999998862 2 2368999999999999999999988876643 2347889999
Q ss_pred HHHHHHHHHHcCCeeee-cCccccccC-chhhHhhhhhhhhhh
Q 004588 197 HTLCLNSAKAIGCTVVN-IGTQDLVEG-RPHLILGLISQIIKI 237 (743)
Q Consensus 197 v~~~L~~~k~~G~~l~~-i~~~DIvdG-~~~liLgLiW~LI~~ 237 (743)
+..+|+++++.+++--. +.+.|+++. |...++--|..+-++
T Consensus 73 Is~Fin~~~k~~vpe~elFQT~DLFE~kd~~qV~~~l~slSRy 115 (178)
T COG5199 73 ISSFINGLKKLRVPEYELFQTNDLFEAKDLRQVVICLYSLSRY 115 (178)
T ss_pred HHHHHHHHHHhCCCHHHHHHhhhHHhhcCHHHHHHHHHHHHHH
Confidence 99999999999975433 677788885 567777777776654
No 55
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=97.99 E-value=1.5e-05 Score=79.21 Aligned_cols=66 Identities=15% Similarity=0.274 Sum_probs=55.9
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCc--HHHH----HHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFT--EEDI----KGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t--~~ei----~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
.+++=+|+.|| +++|+|+.+||..++.+ -+|...+ ++.+ +.++.++|.|+||.|+|+||.+++.+.
T Consensus 104 ~Kl~faF~vYD~~~~G~I~reel~~iv~~--~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 104 EKLRFAFRVYDLDGDGFISREELKQILRM--MVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred HHHHHHHHHhcCCCCCcCcHHHHHHHHHH--HHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 47889999999 99999999999999996 3565555 5555 457789999999999999999998764
No 56
>KOG2046 consensus Calponin [Cytoskeleton]
Probab=97.96 E-value=2.5e-05 Score=76.61 Aligned_cols=86 Identities=26% Similarity=0.459 Sum_probs=66.7
Q ss_pred hhHHHHHHHHhh-cCC-ccccchhHhhhhHHHHHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHHHHHhhhcccc
Q 004588 394 EERCFRLWINSL-GIA-TYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQASKPPIKMPFRKVENCNQVIKIGKQLKFSLV 471 (743)
Q Consensus 394 q~~~f~~WiN~~-~~~-~~v~dl~~Dl~DG~~L~~Lle~ls~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~~g~~l~ 471 (743)
++...+.||-.. ... ..-.|+..-|+||++||+|+++|.|+.+ +..+.+ ++.|+.+||++.-+.+++..|++-+
T Consensus 26 ~~~el~~WI~~~~~~~~~~~~~f~~~LKDG~iLCkl~N~l~p~~~--~~~~~s--~~~f~qmEnIs~Fi~a~~~ygv~~~ 101 (193)
T KOG2046|consen 26 LEKELREWIENVVLTELPARGDFQDLLKDGVILCKLINKLYPGVV--KKINES--KMAFVQMENISNFIKAAKKYGVPEV 101 (193)
T ss_pred HHHHHHHHHHHhhccCCCcccCHHHHHcchHHHHHHHHHhCcCcc--cccccc--cccHHHHHHHHHHHHHHHhcCCChh
Confidence 456688999985 222 3356888999999999999999999655 333333 7899999999999999999998765
Q ss_pred CC-CCcccccChh
Q 004588 472 NV-AGNDFVQGNK 483 (743)
Q Consensus 472 nI-~~~DIvdG~~ 483 (743)
.+ ...|+.+|..
T Consensus 102 d~FqtvDLfE~kd 114 (193)
T KOG2046|consen 102 DLFQTVDLFEGKD 114 (193)
T ss_pred hcccccccccCCC
Confidence 43 4578888754
No 57
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=97.87 E-value=3.9e-05 Score=76.40 Aligned_cols=78 Identities=18% Similarity=0.361 Sum_probs=66.5
Q ss_pred HHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhc-------C
Q 004588 23 LRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQG-------R 94 (743)
Q Consensus 23 ~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~-------~ 94 (743)
+..++++|+.|| |++|.|+..||+.+|. .+|..++.+-++-+++.+|.-++|.|.|++|+..+..++. +
T Consensus 123 i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~---~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~lt~~Fr~~ 199 (221)
T KOG0037|consen 123 INQWRNVFRTYDRDRSGTIDSSELRQALT---QLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQRLTEAFRRR 199 (221)
T ss_pred HHHHHHHHHhcccCCCCcccHHHHHHHHH---HcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHHHHHHHHHHh
Confidence 456889999999 9999999999999999 8999999999999999999888999999999987766544 4
Q ss_pred CCCCCCCCC
Q 004588 95 ATTKPGSAK 103 (743)
Q Consensus 95 ~~~~~g~~~ 103 (743)
++...|...
T Consensus 200 D~~q~G~i~ 208 (221)
T KOG0037|consen 200 DTAQQGSIT 208 (221)
T ss_pred ccccceeEE
Confidence 454455543
No 58
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.82 E-value=5.4e-05 Score=69.57 Aligned_cols=62 Identities=16% Similarity=0.242 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHH
Q 004588 20 QVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAY 88 (743)
Q Consensus 20 ~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~ 88 (743)
.....++.-+|..+| |++|+|+.+||..++. ...+..+..++..+|.|+||.|+|+||...+
T Consensus 44 ~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~l-------~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 44 PMCKDPVGWMFNQLDGNYDGKLSHHELAPIRL-------DPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHc-------cchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 455678999999999 9999999999997652 2447788999999999999999999999988
No 59
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=97.77 E-value=0.00015 Score=72.42 Aligned_cols=102 Identities=18% Similarity=0.221 Sum_probs=88.0
Q ss_pred HHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhc-----CCC
Q 004588 23 LRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQG-----RAT 96 (743)
Q Consensus 23 ~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~-----~~~ 96 (743)
...+...|...| ++.|+|+.+||..+|.. .-...++.+.++-||.-+|.+.+|+|+|.||..+...++. +.-
T Consensus 56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn--~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~Wr~vF~~~ 133 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRDRSGRILAKELQQALSN--GTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQWRNVFRTY 133 (221)
T ss_pred cHHHHHHHHhhCccccccccHHHHHHHhhc--CCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhc
Confidence 457889999999 99999999999999982 2245799999999999999999999999999999987765 556
Q ss_pred CCCCCCCcchHHHHhhhcccccccchhhhh
Q 004588 97 TKPGSAKNSSSFLKASTTTLLHTISESEKA 126 (743)
Q Consensus 97 ~~~g~~~~s~~~lk~~~~~~~~~~~~~e~~ 126 (743)
...+.|.+...+|+.+...++-..+++--.
T Consensus 134 D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~ 163 (221)
T KOG0037|consen 134 DRDRSGTIDSSELRQALTQLGYRLSPQFYN 163 (221)
T ss_pred ccCCCCcccHHHHHHHHHHcCcCCCHHHHH
Confidence 677889999999999999998888885433
No 60
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.74 E-value=9.1e-05 Score=64.61 Aligned_cols=68 Identities=16% Similarity=0.285 Sum_probs=57.0
Q ss_pred HHHHHHHHhHhhhCCCCeeeHHhHHHHHHhhhhcCC----CCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 22 ELRSLKSKFVSIKNQNGKVTVADLPPVMAKLKAFST----MFTEEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 22 e~~~l~~~F~~~D~~~G~I~~~el~~~l~k~~~lg~----~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
-+..|...|..|--+.|.++..||+.+|.+ .++. .-..+.++++|+..|.|+||+|+|.||+.++..+
T Consensus 6 ai~~lI~~FhkYaG~~~tLsk~Elk~Ll~~--Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 6 SMEKMMLTFHKFAGEKNYLNRDDLQKLMEK--EFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHHHHcCCCCcCCHHHHHHHHHH--HhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 467889999999723569999999999985 5542 3456789999999999999999999999999775
No 61
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.57 E-value=0.00015 Score=65.30 Aligned_cols=70 Identities=19% Similarity=0.263 Sum_probs=59.9
Q ss_pred cCCHHHHHHHHHHhHhhhCCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 17 QFTQVELRSLKSKFVSIKNQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
.++++|...+...|...|.++|+|+.++.+.+|.+ ..++.+.+.+|..-+|.|++|.++++||+-+|.=+
T Consensus 3 ~ls~~e~~~y~~~F~~l~~~~g~isg~~a~~~f~~-----S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 3 KLSPEEKQKYDQIFQSLDPQDGKISGDQAREFFMK-----SGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLI 72 (104)
T ss_dssp --SCCHHHHHHHHHHCTSSSTTEEEHHHHHHHHHH-----TTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCeEeHHHHHHHHHH-----cCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence 57889999999999999966899999999999983 35888999999999999999999999998877533
No 62
>PLN02964 phosphatidylserine decarboxylase
Probab=97.57 E-value=0.00021 Score=83.35 Aligned_cols=72 Identities=7% Similarity=0.204 Sum_probs=65.7
Q ss_pred CCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhh
Q 004588 18 FTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQ 92 (743)
Q Consensus 18 ~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~ 92 (743)
.++++...++++|..+| +++|.|+.+||..+|. .+|...+++++.++++.+|.|++|.|+++||.+++...+
T Consensus 173 pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~---~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~~ 245 (644)
T PLN02964 173 PVETERSFARRILAIVDYDEDGQLSFSEFSDLIK---AFGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQQ 245 (644)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH---HhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcc
Confidence 45566667999999999 9999999999999999 688889999999999999999999999999999998765
No 63
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.55 E-value=9.2e-05 Score=50.58 Aligned_cols=25 Identities=24% Similarity=0.523 Sum_probs=13.7
Q ss_pred HHHHhHhhh-CCCCeeeHHhHHHHHH
Q 004588 26 LKSKFVSIK-NQNGKVTVADLPPVMA 50 (743)
Q Consensus 26 l~~~F~~~D-~~~G~I~~~el~~~l~ 50 (743)
++++|+.|| |++|+|+.+||..+|+
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~ 27 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMK 27 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 455555555 5555555555555554
No 64
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=97.44 E-value=0.0002 Score=66.59 Aligned_cols=65 Identities=14% Similarity=0.276 Sum_probs=54.6
Q ss_pred HHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHH----HHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 25 SLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDI----KGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 25 ~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei----~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
..+-+|+++| |++++|..+||...+++| ....++++|+ +.+|.|+|.|+||+++|.||-.++.+.
T Consensus 109 K~~YAFkIYDfd~D~~i~~~DL~~~l~~l--Tr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~ra 178 (189)
T KOG0038|consen 109 KAKYAFKIYDFDGDEFIGHDDLEKTLTSL--TRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILRA 178 (189)
T ss_pred hhhheeEEeecCCCCcccHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHhC
Confidence 4566899999 999999999999999952 2335788877 468899999999999999999998753
No 65
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.38 E-value=0.00022 Score=48.73 Aligned_cols=29 Identities=28% Similarity=0.398 Sum_probs=27.0
Q ss_pred HHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 63 DIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 63 ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
|++++++.+|.|+||.|+|+||+.+|.++
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 68999999999999999999999999764
No 66
>PF06294 DUF1042: Domain of Unknown Function (DUF1042); InterPro: IPR010441 This is a family of proteins of unknown function.; PDB: 2EE7_A.
Probab=97.33 E-value=0.00022 Score=69.19 Aligned_cols=97 Identities=23% Similarity=0.288 Sum_probs=69.5
Q ss_pred HHHHHhhcCCccccchhHhhhhHHHHHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH-HHHHHhhhccccCCCCcc
Q 004588 399 RLWINSLGIATYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQASKPPIKMPFRKVENCNQV-IKIGKQLKFSLVNVAGND 477 (743)
Q Consensus 399 ~~WiN~~~~~~~v~dl~~Dl~DG~~L~~Lle~ls~~~v~~k~~~~~~~~~~~~~ieN~~~~-l~~~k~~g~~l~nI~~~D 477 (743)
.+|++++.....+.++..||.||+++++++....|..|+...+. ++.+...++.|+... ..+++.+|+.+..-..++
T Consensus 2 ~~WL~~l~ls~~~~n~~rDfsdG~lvAEIl~~y~p~~vdlh~y~--~~~s~~~Kl~NW~~Ln~kvl~kl~~~l~~~~i~~ 79 (158)
T PF06294_consen 2 LKWLQSLDLSRPPKNIRRDFSDGYLVAEILSRYYPKLVDLHNYS--NGNSVAQKLNNWETLNEKVLKKLGIKLDKEDIEG 79 (158)
T ss_dssp HHHHHHS--S--SS-HHHHHTTSHHHHHHHHHH-TTT---SS------SSHHHHHHHHHHHHHHTTGGGT----HHHHHH
T ss_pred hHHHhcCCCCCCCCchHHHcccccHHHHHHHHHCCCCccccccC--CCCCHHHHHHHHHHHHHHHHHHcCCCCCHHHHHH
Confidence 57999976667788999999999999999999999998755444 446789999999999 999999999876555678
Q ss_pred cccChhHHHHHHHHHHHHHH
Q 004588 478 FVQGNKKLILAFLWQLMRFN 497 (743)
Q Consensus 478 IvdG~~kliL~LlW~Li~~~ 497 (743)
|+.|.+..+-.|+.+|+.+-
T Consensus 80 i~~~~~Gaae~lL~~L~~~l 99 (158)
T PF06294_consen 80 IINCKPGAAESLLYQLYTKL 99 (158)
T ss_dssp HHTT-TTTTHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHH
Confidence 89999999999999995443
No 67
>COG5199 SCP1 Calponin [Cytoskeleton]
Probab=97.30 E-value=0.00049 Score=64.08 Aligned_cols=100 Identities=23% Similarity=0.432 Sum_probs=74.1
Q ss_pred hhhHHHHHHHHhhcCC--ccccchhHhhhhHHHHHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHHHHHhhhccc
Q 004588 393 REERCFRLWINSLGIA--TYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQASKPPIKMPFRKVENCNQVIKIGKQLKFSL 470 (743)
Q Consensus 393 ~q~~~f~~WiN~~~~~--~~v~dl~~Dl~DG~~L~~Lle~ls~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~~g~~l 470 (743)
.|++..+.||-..+.. ..-.||.+.|+||++||+++....+..+.||.- +|+|-.+||+...++++++.++.-
T Consensus 13 ~~~kev~~Wie~~l~~k~~ppgdll~~lkdGv~lCril~ea~~~~I~yKeS-----kmpFVQmenIs~Fin~~~k~~vpe 87 (178)
T COG5199 13 KQQKEVTLWIETVLGEKFEPPGDLLSLLKDGVRLCRILNEASPLDIKYKES-----KMPFVQMENISSFINGLKKLRVPE 87 (178)
T ss_pred HHHHHHHHHHHHHHHhhhCCcccHHHHHhcchHHHHHHhhcCcccceeccc-----CCceeeHHHHHHHHHHHHHhCCCH
Confidence 4667788999986543 234789999999999999999999999988753 577999999999999999977542
Q ss_pred c-CCCCcccccC-hhHHHHHHHHHHHHHH
Q 004588 471 V-NVAGNDFVQG-NKKLILAFLWQLMRFN 497 (743)
Q Consensus 471 ~-nI~~~DIvdG-~~kliL~LlW~Li~~~ 497 (743)
. -..-.|+.+. +...++.-|.+|-||-
T Consensus 88 ~elFQT~DLFE~kd~~qV~~~l~slSRya 116 (178)
T COG5199 88 YELFQTNDLFEAKDLRQVVICLYSLSRYA 116 (178)
T ss_pred HHHHHhhhHHhhcCHHHHHHHHHHHHHHH
Confidence 1 1223455543 4566666666665553
No 68
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.28 E-value=0.00035 Score=48.40 Aligned_cols=27 Identities=19% Similarity=0.448 Sum_probs=23.9
Q ss_pred HHHHHhHhhh-CCCCeeeHHhHHHHHHh
Q 004588 25 SLKSKFVSIK-NQNGKVTVADLPPVMAK 51 (743)
Q Consensus 25 ~l~~~F~~~D-~~~G~I~~~el~~~l~k 51 (743)
+++++|+.|| +++|+|+.+||..+|++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 5789999999 99999999999999983
No 69
>PF06294 DUF1042: Domain of Unknown Function (DUF1042); InterPro: IPR010441 This is a family of proteins of unknown function.; PDB: 2EE7_A.
Probab=97.26 E-value=0.00021 Score=69.40 Aligned_cols=99 Identities=23% Similarity=0.353 Sum_probs=66.6
Q ss_pred HHHHHhHHhhccCCccccccCCCCCCCChHHHHHHhhhcCCCceecccccCCCChHHHHHhHHHH-HHHHHHcCCCcccC
Q 004588 519 ILKWANDKVKSTGRTSQMESFKDKSLSNGLFFLELLSSVEPRVVNWNLVTKGESDEEKRLNATYI-ISVARKLGCSIFLL 597 (743)
Q Consensus 519 LL~W~~~~~~~~~~~~~i~nfsd~s~~dG~a~~aLl~~~~P~~i~~~~l~~~~~~~~~~~n~~~a-~~~A~~lGi~~ll~ 597 (743)
|++|.+. +.. .+.+.|+. .+|+||..++.|+++|.|..||+....++.+-..+..|-..- ..+..++|++ ++
T Consensus 1 l~~WL~~-l~l---s~~~~n~~-rDfsdG~lvAEIl~~y~p~~vdlh~y~~~~s~~~Kl~NW~~Ln~kvl~kl~~~--l~ 73 (158)
T PF06294_consen 1 LLKWLQS-LDL---SRPPKNIR-RDFSDGYLVAEILSRYYPKLVDLHNYSNGNSVAQKLNNWETLNEKVLKKLGIK--LD 73 (158)
T ss_dssp HHHHHHH-S-----S--SS-HH-HHHTTSHHHHHHHHHH-TTT---SS----SSHHHHHHHHHHHHHHTTGGGT------
T ss_pred ChHHHhc-CCC---CCCCCchH-HHcccccHHHHHHHHHCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHcCCC--CC
Confidence 5799998 332 35678887 899999999999999999999999999988888888888876 6777889985 55
Q ss_pred cchh---ccCCchHHHHHHHHHHHHhhcCC
Q 004588 598 PEDI---MEVNQKMILTLTASIMYWSLQQQ 624 (743)
Q Consensus 598 peDi---~~~d~k~iltyls~~~~~~~~~~ 624 (743)
.+++ +.+.+-.+...|.++|..+..+.
T Consensus 74 ~~~i~~i~~~~~Gaae~lL~~L~~~l~~~~ 103 (158)
T PF06294_consen 74 KEDIEGIINCKPGAAESLLYQLYTKLTKKK 103 (158)
T ss_dssp HHHHHHHHTT-TTTTHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 5554 45788888899999998885543
No 70
>KOG2996 consensus Rho guanine nucleotide exchange factor VAV3 [Signal transduction mechanisms]
Probab=97.25 E-value=0.00057 Score=76.09 Aligned_cols=73 Identities=30% Similarity=0.382 Sum_probs=64.8
Q ss_pred ChhhHHHHhhhhHHHHHHHHHHcCCCccccccccCCCCChhHHHHHHHHHHHHHHH-cCCeeee-cCccccccCc
Q 004588 151 TTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNSAKA-IGCTVVN-IGTQDLVEGR 223 (743)
Q Consensus 151 ~v~dl~~dl~DGv~L~~Lle~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L~~~k~-~G~~l~~-i~~~DIvdG~ 223 (743)
.|-||...|+|||+||.|++-|.|..|+.+.||.++.+++|-++.|+..+|.+|.. .|+.-.. +.+.|+++-+
T Consensus 29 ~v~dlAq~LRDGvLLCqLlnnL~p~sIdlkeIn~rpQmSqFLClkNIrtFl~~C~~~Fglr~seLF~afDLfdv~ 103 (865)
T KOG2996|consen 29 QVFDLAQALRDGVLLCQLLNNLVPHSIDLKEINLRPQMSQFLCLKNIRTFLMFCCEKFGLRDSELFEAFDLFDVR 103 (865)
T ss_pred hHHHHHHHHhhhhHHHHHHhhcCCCcccHHHhhcCCCccchhhHhhHHHHHHHHHHHhCCchhhhcchhhhhhhh
Confidence 57899999999999999999999999999999999889999999999999999986 6775433 7888888843
No 71
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=97.17 E-value=0.0019 Score=64.36 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=82.4
Q ss_pred hcCCHHHHHHHHHHhHhhh-C-CCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCc-cCHHHHHHHHHhhh
Q 004588 16 SQFTQVELRSLKSKFVSIK-N-QNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDE-IDFEAFLRAYINLQ 92 (743)
Q Consensus 16 ~~~t~~e~~~l~~~F~~~D-~-~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~-I~feeFl~~~~~~~ 92 (743)
.+|+..|++.|...|..+| + ++|+++.+|+..+.. +..++= ...+++-++.+++|. |+|++|++.+.-..
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~----~~~Np~---~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~ 97 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPE----LALNPL---ADRIIDRFDTDGNGDPVDFEEFVRLLSVFS 97 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHH----HhcCcH---HHHHHHHHhccCCCCccCHHHHHHHHhhhc
Confidence 4599999999999999999 7 999999999999987 333333 456788888888888 99999999998777
Q ss_pred cCCCCC------------CCCCCcchHHHHhhhccccc-ccc--hhhhhHHHH
Q 004588 93 GRATTK------------PGSAKNSSSFLKASTTTLLH-TIS--ESEKASYVA 130 (743)
Q Consensus 93 ~~~~~~------------~g~~~~s~~~lk~~~~~~~~-~~~--~~e~~~f~~ 130 (743)
.+...+ .++|+++..+++.....+.. .+. +++....++
T Consensus 98 ~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d 150 (187)
T KOG0034|consen 98 PKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVD 150 (187)
T ss_pred CCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 666555 16788888888777554432 344 555555444
No 72
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=97.10 E-value=0.0031 Score=76.81 Aligned_cols=113 Identities=12% Similarity=0.249 Sum_probs=84.1
Q ss_pred cCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCC--cHH-----HHHHHHHHHcCCCCCccCHHHHHHHH
Q 004588 17 QFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMF--TEE-----DIKGILAESYAGAGDEIDFEAFLRAY 88 (743)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~--t~~-----ei~~~i~e~d~d~dg~I~feeFl~~~ 88 (743)
..|++.+.++.-+|+.|| +.+|+++..+++.+|+ ++|+.+ .++ +++++|.-+|++.+|.|+..+|+++|
T Consensus 2246 GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLr---slgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afm 2322 (2399)
T KOG0040|consen 2246 GVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLR---SLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFM 2322 (2399)
T ss_pred CCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHH---hcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHH
Confidence 468899999999999999 9999999999999999 899865 455 89999999999999999999999999
Q ss_pred HhhhcCCCCCCCCCCcchHHHHhhhccc------------ccccchhhhhHHHHHHHhhhCCC
Q 004588 89 INLQGRATTKPGSAKNSSSFLKASTTTL------------LHTISESEKASYVAHINSYLGDD 139 (743)
Q Consensus 89 ~~~~~~~~~~~g~~~~s~~~lk~~~~~~------------~~~~~~~e~~~f~~WIN~~L~~~ 139 (743)
.+-... |.+.+ ..+..+...+ ....+.+|..-|+..|-.+...+
T Consensus 2323 i~~ETe------NI~s~-~eIE~AfraL~a~~~yvtke~~~~~ltreqaefc~s~m~~~~e~~ 2378 (2399)
T KOG0040|consen 2323 ISKETE------NILSS-EEIEDAFRALDAGKPYVTKEELYQNLTREQAEFCMSKMKPYAETS 2378 (2399)
T ss_pred Hhcccc------cccch-HHHHHHHHHhhcCCccccHHHHHhcCCHHHHHHHHHHhhhhcccc
Confidence 653222 22222 2222221111 12456667777777777766543
No 73
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=97.01 E-value=0.0016 Score=70.52 Aligned_cols=67 Identities=18% Similarity=0.361 Sum_probs=57.5
Q ss_pred HHHHHhHhhh-CCCCeeeHHhHHHHHHhhh-hcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 25 SLKSKFVSIK-NQNGKVTVADLPPVMAKLK-AFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 25 ~l~~~F~~~D-~~~G~I~~~el~~~l~k~~-~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
.|..+|+.+| |++|.|+.+|++.+.+-+. -+...++++++-++-+.+|.|+||.||+.||++++.-+
T Consensus 548 ~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 548 SLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred hHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 4778899999 9999999999999877321 33457899999999999999999999999999988543
No 74
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=97.01 E-value=0.0014 Score=70.90 Aligned_cols=66 Identities=15% Similarity=0.223 Sum_probs=61.0
Q ss_pred HHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 23 LRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 23 ~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
..++.+.|..+| ++||.|+..|+...++ .+|..+++++...+++.+|.++++.|+|+||-..+.-.
T Consensus 81 E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~---~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~ 147 (463)
T KOG0036|consen 81 ELELYRIFQSIDLEHDGKIDPNEIWRYLK---DLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLY 147 (463)
T ss_pred HHHHHHHHhhhccccCCccCHHHHHHHHH---HhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcC
Confidence 457899999999 9999999999999999 79999999999999999999999999999998877543
No 75
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=96.66 E-value=0.0021 Score=72.48 Aligned_cols=86 Identities=22% Similarity=0.304 Sum_probs=63.1
Q ss_pred HHHHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHHHHHHHHHHcCCCccccccccC--CCCChhHHHHHHHHHHHHH
Q 004588 127 SYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTK--RVINPWERNENHTLCLNSA 204 (743)
Q Consensus 127 ~f~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~L~~Lle~l~~~~i~~~~i~~~--~~~~~~~~~eNv~~~L~~~ 204 (743)
...+.|...|.- .+| .||...|.|||+||+|+|.+.|..+..=-+..+ ++++-.+...||..+|++|
T Consensus 580 QLRk~iEtRLk~------sLp-----~Dl~aALtDGViLChLaN~lRPRSV~SIHVPSPaV~klsmarcrrNVdnFLeaC 648 (722)
T KOG0532|consen 580 QLRKLIETRLKV------SLP-----EDLAAALTDGVILCHLANHLRPRSVASIHVPSPAVPKLSMARCRRNVDNFLEAC 648 (722)
T ss_pred HHHHHHHHHhcc------cCc-----hhHHHHhhcchhhHhhhcccCCCCccceecCCCccchhHHHHHHHhHHHHHHHH
Confidence 344555555544 354 479999999999999999999976643222222 1345567889999999999
Q ss_pred HHcCCeeee-cCccccccCc
Q 004588 205 KAIGCTVVN-IGTQDLVEGR 223 (743)
Q Consensus 205 k~~G~~l~~-i~~~DIvdG~ 223 (743)
+++|+.-.. +++.||+.+.
T Consensus 649 RkiGVpEa~lCS~~Dilq~~ 668 (722)
T KOG0532|consen 649 RKIGVPEADLCSPMDILQKI 668 (722)
T ss_pred HHcCCChHhhcCHHHhhhhh
Confidence 999998776 6888988774
No 76
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.50 E-value=0.0034 Score=41.33 Aligned_cols=24 Identities=21% Similarity=0.548 Sum_probs=17.2
Q ss_pred HHHHhHhhh-CCCCeeeHHhHHHHH
Q 004588 26 LKSKFVSIK-NQNGKVTVADLPPVM 49 (743)
Q Consensus 26 l~~~F~~~D-~~~G~I~~~el~~~l 49 (743)
|+++|+.+| |++|.|+.+|+..++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 456777777 777777777777653
No 77
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=96.49 E-value=0.004 Score=62.26 Aligned_cols=91 Identities=14% Similarity=0.185 Sum_probs=64.7
Q ss_pred cCCHHHHHHHHHHhHhhhCCCCeeeHHhHHHHHHhhhhcCCCCcH-HHHHHHHHHHcCCCCCccCHHHHHHHHHhhhcCC
Q 004588 17 QFTQVELRSLKSKFVSIKNQNGKVTVADLPPVMAKLKAFSTMFTE-EDIKGILAESYAGAGDEIDFEAFLRAYINLQGRA 95 (743)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D~~~G~I~~~el~~~l~k~~~lg~~~t~-~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~~~ 95 (743)
.|+..|+..+.+.|.. +..+|.++.++++.+++ .+.-.-+. .-.+-+++.+|.|+||.|+|+||+..+.-+..+.
T Consensus 22 ~f~~~ei~~~Yr~Fk~-~cP~G~~~~~~F~~i~~---~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt 97 (193)
T KOG0044|consen 22 KFSKKEIQQWYRGFKN-ECPSGRLTLEEFREIYA---SFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGT 97 (193)
T ss_pred CCCHHHHHHHHHHhcc-cCCCCccCHHHHHHHHH---HHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCc
Confidence 5676666666666653 35589999999999999 45543343 4446688999999999999999999887665544
Q ss_pred CCCC-----------CCCCcchHHHHh
Q 004588 96 TTKP-----------GSAKNSSSFLKA 111 (743)
Q Consensus 96 ~~~~-----------g~~~~s~~~lk~ 111 (743)
.... |+|.++..++=.
T Consensus 98 ~eekl~w~F~lyD~dgdG~It~~Eml~ 124 (193)
T KOG0044|consen 98 LEEKLKWAFRLYDLDGDGYITKEEMLK 124 (193)
T ss_pred HHHHhhhhheeecCCCCceEcHHHHHH
Confidence 4333 667777554433
No 78
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=96.46 E-value=0.013 Score=58.59 Aligned_cols=69 Identities=14% Similarity=0.100 Sum_probs=57.8
Q ss_pred HHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhcC
Q 004588 23 LRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQGR 94 (743)
Q Consensus 23 ~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~~ 94 (743)
..-...+|+.|| +++|.|+..|+-.++. .+-..-.++.++-.++-+|.|+||.|+++|++.++..+...
T Consensus 63 ~~y~~~vF~~fD~~~dg~i~F~Efi~als---~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m 132 (193)
T KOG0044|consen 63 SKYAELVFRTFDKNKDGTIDFLEFICALS---LTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQM 132 (193)
T ss_pred HHHHHHHHHHhcccCCCCcCHHHHHHHHH---HHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHH
Confidence 344677899999 9999999999888888 34445667778888999999999999999999999887664
No 79
>KOG0516 consensus Dystonin, GAS (Growth-arrest-specific protein), and related proteins [Cytoskeleton]
Probab=96.33 E-value=0.0018 Score=81.38 Aligned_cols=110 Identities=21% Similarity=0.358 Sum_probs=83.6
Q ss_pred hhhhhHHHHHHHHhhcC--CccccchhHhhhh--HHHHHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHHHHHhh
Q 004588 391 TSREERCFRLWINSLGI--ATYCNNVFEDVRN--GWLLLEVLDKVSPGSVDWKQASKPPIKMPFRKVENCNQVIKIGKQL 466 (743)
Q Consensus 391 ~~~q~~~f~~WiN~~~~--~~~v~dl~~Dl~D--G~~L~~Lle~ls~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~~ 466 (743)
..+|+++|+.|++.++. .++|.+++++|++ .+.+..+.+.+....-. -.......+++.++|+..+++++++.
T Consensus 72 ~~~~k~~f~~~~~~~l~~~~~~ve~~~~~l~~~~~i~~l~~~e~~~~~~~~---~~~~~~~~~~~~l~n~q~~l~~~k~~ 148 (1047)
T KOG0516|consen 72 DLVQKKLFPDWLAKELEKVMKHVEDLYEDLRDLNSISLLEVEELLVAVRKQ---EPEQDRQERLHDLENVQAALTALKED 148 (1047)
T ss_pred HHHHHhccchhhHHHHHHhccchhHHhhhhhhhhHHHHHHHHHhhhhhhhh---hHHHHHHHHHhhHHHHHhhhccchHH
Confidence 68899999999999863 5789999999994 44444444444322110 00001134678999999999999999
Q ss_pred hccccC--CCCcccccChhHHHHHHHHHH-HHHHHHhhhh
Q 004588 467 KFSLVN--VAGNDFVQGNKKLILAFLWQL-MRFNMLQLLK 503 (743)
Q Consensus 467 g~~l~n--I~~~DIvdG~~kliL~LlW~L-i~~~i~~~~~ 503 (743)
.+.+++ |..++|..|+.+.+|+++|.+ .+|+..+.+.
T Consensus 149 ~~el~~~~~~~~~~~~~~~~~~l~~~~ei~l~~Q~~~ll~ 188 (1047)
T KOG0516|consen 149 LAELVNFLIRDAEIKLGNPELGLGLIWEIILHFQYVKLLA 188 (1047)
T ss_pred HHHHHHhhcccchhhccchhhhhhhHHHHHHHHHHHHhhh
Confidence 999999 999999999999999999999 6888765543
No 80
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.23 E-value=0.014 Score=45.06 Aligned_cols=50 Identities=14% Similarity=0.276 Sum_probs=41.1
Q ss_pred eeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 39 KVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 39 ~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
+++.+|++.+|+ .+...+.++....++++.|.+++|.++.+||...+..+
T Consensus 1 kmsf~Evk~lLk---~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 1 KMSFKEVKKLLK---MMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp EBEHHHHHHHHH---HTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHH---HHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence 468899999999 68999999999999999999999999999999988764
No 81
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.13 E-value=0.0095 Score=66.19 Aligned_cols=52 Identities=10% Similarity=0.062 Sum_probs=45.6
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhh
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINL 91 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~ 91 (743)
..++.+|+.|| +++|+|+.+|+. . ++.++..+|.|+||.|+|+||...+...
T Consensus 334 ~~l~~aF~~~D~dgdG~Is~~E~~---~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~ 386 (391)
T PRK12309 334 HAAQEIFRLYDLDGDGFITREEWL---G-------------SDAVFDALDLNHDGKITPEEMRAGLGAA 386 (391)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHH---H-------------HHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 46788999999 999999999983 1 4678999999999999999999988654
No 82
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.83 E-value=0.031 Score=59.17 Aligned_cols=90 Identities=12% Similarity=0.183 Sum_probs=65.8
Q ss_pred HHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhcCCCCCC--
Q 004588 23 LRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQGRATTKP-- 99 (743)
Q Consensus 23 ~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~~~~~~~-- 99 (743)
+..-++.|+.-| |++|.+|.+||...|.= +-...+.+--|++-|.+.|.|+||.|+|+||+.=|...........
T Consensus 162 ~~rDe~rFk~AD~d~dg~lt~EEF~aFLHP--Ee~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv 239 (325)
T KOG4223|consen 162 IARDEERFKAADQDGDGSLTLEEFTAFLHP--EEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWV 239 (325)
T ss_pred HHHHHHHHhhcccCCCCcccHHHHHhccCh--hhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccc
Confidence 455677899999 99999999999998871 2233455666788999999999999999999987655443222211
Q ss_pred --------------CCCCcchHHHHhhhc
Q 004588 100 --------------GSAKNSSSFLKASTT 114 (743)
Q Consensus 100 --------------g~~~~s~~~lk~~~~ 114 (743)
+.|++...+++.-..
T Consensus 240 ~~Ere~F~~~~DknkDG~L~~dEl~~WI~ 268 (325)
T KOG4223|consen 240 LTEREQFFEFRDKNKDGKLDGDELLDWIL 268 (325)
T ss_pred cccHHHHHHHhhcCCCCccCHHHHhcccC
Confidence 457777777764433
No 83
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=95.68 E-value=0.016 Score=65.32 Aligned_cols=83 Identities=14% Similarity=0.254 Sum_probs=74.6
Q ss_pred chHhhhcCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Q 004588 11 DQWLQSQFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYI 89 (743)
Q Consensus 11 ~~~l~~~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~ 89 (743)
.+.++-.++.+++..++..|..+| ++.|++++.++.++|+ +.+...+++.+.+.+++++.+.+|.+...||++++.
T Consensus 580 ~~~~~i~~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk---~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s 656 (680)
T KOG0042|consen 580 QMSIPIKLTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLK---SENVGWDEDRLHEELQEADENLNGFVELREFLQLMS 656 (680)
T ss_pred ccccccccCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH---HhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHH
Confidence 334455689999999999999999 9999999999999999 688889999999999999999999999999999998
Q ss_pred hhhcCCC
Q 004588 90 NLQGRAT 96 (743)
Q Consensus 90 ~~~~~~~ 96 (743)
.++.+.+
T Consensus 657 ~~~~g~~ 663 (680)
T KOG0042|consen 657 AIKNGCT 663 (680)
T ss_pred HHhcCCh
Confidence 8877654
No 84
>KOG0516 consensus Dystonin, GAS (Growth-arrest-specific protein), and related proteins [Cytoskeleton]
Probab=95.59 E-value=0.0045 Score=77.88 Aligned_cols=112 Identities=20% Similarity=0.162 Sum_probs=83.6
Q ss_pred chhhhhHHHHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHHHHHHHHHHcCCCccccccccCCCCChhHHHHHHHHH
Q 004588 121 SESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLC 200 (743)
Q Consensus 121 ~~~e~~~f~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~L~~Lle~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~ 200 (743)
...+++.|..|+|..+..- ...+.+++++|.+ ...+.+++...+.......-.-.....+++.++|+..+
T Consensus 72 ~~~~k~~f~~~~~~~l~~~---------~~~ve~~~~~l~~-~~~i~~l~~~e~~~~~~~~~~~~~~~~~~~~l~n~q~~ 141 (1047)
T KOG0516|consen 72 DLVQKKLFPDWLAKELEKV---------MKHVEDLYEDLRD-LNSISLLEVEELLVAVRKQEPEQDRQERLHDLENVQAA 141 (1047)
T ss_pred HHHHHhccchhhHHHHHHh---------ccchhHHhhhhhh-hhHHHHHHHHHhhhhhhhhhHHHHHHHHHhhHHHHHhh
Confidence 6779999999999999884 4578999999985 44444444443322111000000012356789999999
Q ss_pred HHHHHHcCCeeee--cCccccccCchhhHhhhhhhhhhhhhhhc
Q 004588 201 LNSAKAIGCTVVN--IGTQDLVEGRPHLILGLISQIIKIQLLAD 242 (743)
Q Consensus 201 L~~~k~~G~~l~~--i~~~DIvdG~~~liLgLiW~LI~~~~l~~ 242 (743)
|++++.....+++ |..++|..|+++.+++++|.|+.+++...
T Consensus 142 l~~~k~~~~el~~~~~~~~~~~~~~~~~~l~~~~ei~l~~Q~~~ 185 (1047)
T KOG0516|consen 142 LTALKEDLAELVNFLIRDAEIKLGNPELGLGLIWEIILHFQYVK 185 (1047)
T ss_pred hccchHHHHHHHHhhcccchhhccchhhhhhhHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999998877543
No 85
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.58 E-value=0.033 Score=50.03 Aligned_cols=70 Identities=14% Similarity=0.265 Sum_probs=49.2
Q ss_pred hcCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhh---hcCC----CCcHHHHHHHHH----HHcCCCCCccCHHH
Q 004588 16 SQFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLK---AFST----MFTEEDIKGILA----ESYAGAGDEIDFEA 83 (743)
Q Consensus 16 ~~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~---~lg~----~~t~~ei~~~i~----e~d~d~dg~I~fee 83 (743)
..+|+++++- --|...| |++|+++--||..++.-.- .-|. -+++.|+..||. .-|.|+||.|+|.|
T Consensus 61 a~mtpeqlqf--HYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgE 138 (144)
T KOG4065|consen 61 AKMTPEQLQF--HYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGE 138 (144)
T ss_pred hhCCHHHHhh--hhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHH
Confidence 3456666542 2378889 9999999999999887320 1122 245777766554 55888999999999
Q ss_pred HHHH
Q 004588 84 FLRA 87 (743)
Q Consensus 84 Fl~~ 87 (743)
|++.
T Consensus 139 flK~ 142 (144)
T KOG4065|consen 139 FLKR 142 (144)
T ss_pred HHhh
Confidence 9874
No 86
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=95.57 E-value=0.015 Score=38.27 Aligned_cols=25 Identities=24% Similarity=0.384 Sum_probs=22.4
Q ss_pred HHHHHHHHcCCCCCccCHHHHHHHH
Q 004588 64 IKGILAESYAGAGDEIDFEAFLRAY 88 (743)
Q Consensus 64 i~~~i~e~d~d~dg~I~feeFl~~~ 88 (743)
++++++.+|.|+||.|+++||.+++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 4678999999999999999999864
No 87
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=95.46 E-value=0.018 Score=58.18 Aligned_cols=69 Identities=13% Similarity=0.286 Sum_probs=53.0
Q ss_pred HHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCc--HHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhc
Q 004588 23 LRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFT--EEDIKGILAESYAGAGDEIDFEAFLRAYINLQG 93 (743)
Q Consensus 23 ~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t--~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~ 93 (743)
-+.|+.+|...| +.+|+|++.|+++.+++ .+.+-+. -++-+..++.+|.|+||.|.|+||.--+...+.
T Consensus 100 rrklmviFsKvDVNtDrkisAkEmqrwIme--ktaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskg 171 (362)
T KOG4251|consen 100 RRKLMVIFSKVDVNTDRKISAKEMQRWIME--KTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKG 171 (362)
T ss_pred HHHHHHHHhhcccCccccccHHHHHHHHHH--HHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcC
Confidence 467999999999 99999999999997774 3332222 234455677889999999999999877766544
No 88
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=94.19 E-value=0.064 Score=36.98 Aligned_cols=27 Identities=15% Similarity=0.118 Sum_probs=24.1
Q ss_pred HHHHHHHHHcCCCCCccCHHHHHHHHH
Q 004588 63 DIKGILAESYAGAGDEIDFEAFLRAYI 89 (743)
Q Consensus 63 ei~~~i~e~d~d~dg~I~feeFl~~~~ 89 (743)
+++++++.+|.|++|.|+++||..++.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 578899999999999999999999987
No 89
>KOG2996 consensus Rho guanine nucleotide exchange factor VAV3 [Signal transduction mechanisms]
Probab=94.15 E-value=0.081 Score=59.58 Aligned_cols=73 Identities=19% Similarity=0.343 Sum_probs=59.7
Q ss_pred HHHHHHHHhhcC----------CccccchhHhhhhHHHHHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHHHHHh
Q 004588 396 RCFRLWINSLGI----------ATYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQASKPPIKMPFRKVENCNQVIKIGKQ 465 (743)
Q Consensus 396 ~~f~~WiN~~~~----------~~~v~dl~~Dl~DG~~L~~Lle~ls~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~ 465 (743)
+-..+|+-...+ ...|-+|...||||++||+|++.|.|..++.|.++..|-.+.|-++.|++..+.++..
T Consensus 5 rqCarWLidckVLptnhrvtw~~a~v~dlAq~LRDGvLLCqLlnnL~p~sIdlkeIn~rpQmSqFLClkNIrtFl~~C~~ 84 (865)
T KOG2996|consen 5 RQCARWLIDCKVLPTNHRVTWDSAQVFDLAQALRDGVLLCQLLNNLVPHSIDLKEINLRPQMSQFLCLKNIRTFLMFCCE 84 (865)
T ss_pred HHHHHHHhhccccCCCcccccCcchHHHHHHHHhhhhHHHHHHhhcCCCcccHHHhhcCCCccchhhHhhHHHHHHHHHH
Confidence 346678766421 1347799999999999999999999999999999987767889999999999999874
Q ss_pred -hhc
Q 004588 466 -LKF 468 (743)
Q Consensus 466 -~g~ 468 (743)
.|.
T Consensus 85 ~Fgl 88 (865)
T KOG2996|consen 85 KFGL 88 (865)
T ss_pred HhCC
Confidence 444
No 90
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=93.82 E-value=0.047 Score=50.08 Aligned_cols=60 Identities=17% Similarity=0.306 Sum_probs=44.8
Q ss_pred HHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHH
Q 004588 22 ELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLR 86 (743)
Q Consensus 22 e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~ 86 (743)
....+.=.|..+| |+||.++..||..+.. .+ ...+.=++.+++..|.|+||.|++.|+..
T Consensus 52 ~~~~~~W~F~~LD~n~d~~L~~~El~~l~~---~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 52 CKRVVHWKFCQLDRNKDGVLDRSELKPLRR---PL--MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp GHHHHHHHHHHH--T-SSEE-TTTTGGGGS---TT--STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhhHhhhcCCCCCccCHHHHHHHHH---HH--hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 3456777799999 9999999999998866 23 44455688999999999999999999863
No 91
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=93.77 E-value=0.13 Score=44.19 Aligned_cols=64 Identities=13% Similarity=0.249 Sum_probs=52.6
Q ss_pred HHHHHhHhhhCCCCeeeHHhHHHHHHhhhhcCC-CCcHHHHHHHHHHHcCC----CCCccCHHHHHHHHHh
Q 004588 25 SLKSKFVSIKNQNGKVTVADLPPVMAKLKAFST-MFTEEDIKGILAESYAG----AGDEIDFEAFLRAYIN 90 (743)
Q Consensus 25 ~l~~~F~~~D~~~G~I~~~el~~~l~k~~~lg~-~~t~~ei~~~i~e~d~d----~dg~I~feeFl~~~~~ 90 (743)
++..+|..+-.+.+.+|.++|...|++ .-|. ..+.+++.++|..+..+ ..+.++++.|.+.+..
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~--eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S 69 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLRE--EQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFS 69 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHH--TSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHS
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHH--HhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCC
Confidence 467788888655789999999999985 5676 57999999999998665 4789999999998854
No 92
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=93.43 E-value=0.077 Score=60.34 Aligned_cols=84 Identities=14% Similarity=0.150 Sum_probs=62.4
Q ss_pred HHHHHhhcCCccccchhHhhhhHHHHHHHHHHhCCCCccccccCCCC--CCChhHHHHHHHHHHHHHHhhhcccc-CCCC
Q 004588 399 RLWINSLGIATYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQASKPP--IKMPFRKVENCNQVIKIGKQLKFSLV-NVAG 475 (743)
Q Consensus 399 ~~WiN~~~~~~~v~dl~~Dl~DG~~L~~Lle~ls~~~v~~k~~~~~~--~~~~~~~ieN~~~~l~~~k~~g~~l~-nI~~ 475 (743)
++-|-..+...--.||...|.||++||+|.+.+.|.+|.--++..|. ..+..++.-|+...|++|+++|+.-. -+++
T Consensus 582 Rk~iEtRLk~sLp~Dl~aALtDGViLChLaN~lRPRSV~SIHVPSPaV~klsmarcrrNVdnFLeaCRkiGVpEa~lCS~ 661 (722)
T KOG0532|consen 582 RKLIETRLKVSLPEDLAAALTDGVILCHLANHLRPRSVASIHVPSPAVPKLSMARCRRNVDNFLEACRKIGVPEADLCSP 661 (722)
T ss_pred HHHHHHHhcccCchhHHHHhhcchhhHhhhcccCCCCccceecCCCccchhHHHHHHHhHHHHHHHHHHcCCChHhhcCH
Confidence 34455545444456899999999999999999999988643333331 12346788999999999999999643 4788
Q ss_pred cccccCh
Q 004588 476 NDFVQGN 482 (743)
Q Consensus 476 ~DIvdG~ 482 (743)
.||+.+.
T Consensus 662 ~Dilq~~ 668 (722)
T KOG0532|consen 662 MDILQKI 668 (722)
T ss_pred HHhhhhh
Confidence 9998874
No 93
>KOG3000 consensus Microtubule-binding protein involved in cell cycle control [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=93.37 E-value=0.71 Score=49.13 Aligned_cols=103 Identities=17% Similarity=0.209 Sum_probs=69.1
Q ss_pred cccChhHHHHHHhHHhhccCCccccccCCCCCCCChHHHHHHhhhcCCCceecccccCCCChH-HHHHhHHHHHHHH-HH
Q 004588 512 KEITDAGILKWANDKVKSTGRTSQMESFKDKSLSNGLFFLELLSSVEPRVVNWNLVTKGESDE-EKRLNATYIISVA-RK 589 (743)
Q Consensus 512 ~~~~~~~LL~W~~~~~~~~~~~~~i~nfsd~s~~dG~a~~aLl~~~~P~~i~~~~l~~~~~~~-~~~~n~~~a~~~A-~~ 589 (743)
..++.-++|.|+|..+...- .+|.. ...|-|.|-|.+.+.|..|+...+......+ +-..|.+. +.-+ .+
T Consensus 13 ~~~sR~E~laW~N~~l~~n~--~kIEe-----~~tGaaycqlmd~l~p~~i~lkkVkf~A~~Ehe~i~Nfk~-lQ~~f~k 84 (295)
T KOG3000|consen 13 ENESRLEILAWINDLLQLNL--TKIEE-----LCTGAAYCQLMDMLFPPDIPLKKVKFAARLEHEYIPNFKV-LQTCFNK 84 (295)
T ss_pred cccchHHHHHHHHhhhhcch--hhhhh-----hcccchhhhhhhhccCCccccccccccccccchhhhhhHH-HHHHHHh
Confidence 34456799999999776532 34544 4569999999999999999888776543222 33344443 4444 58
Q ss_pred cCCCcccCcchhccC---CchHHHHHHHHHHHHhhc
Q 004588 590 LGCSIFLLPEDIMEV---NQKMILTLTASIMYWSLQ 622 (743)
Q Consensus 590 lGi~~ll~peDi~~~---d~k~iltyls~~~~~~~~ 622 (743)
+||.+.+..++++.+ |-.-.+-|+-.||+....
T Consensus 85 lgi~k~v~vdkLvKg~~qDNlEF~qWfkkffd~~~~ 120 (295)
T KOG3000|consen 85 LGIDKVVDVDKLVKGPFQDNLEFLQWFKKFFDANYG 120 (295)
T ss_pred cCCcccccHHHHhcccccchHHHHHHHHHHhhccCC
Confidence 999999999999986 444444444444444433
No 94
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=92.99 E-value=0.1 Score=33.69 Aligned_cols=25 Identities=20% Similarity=0.473 Sum_probs=16.0
Q ss_pred HHHHhHhhh-CCCCeeeHHhHHHHHH
Q 004588 26 LKSKFVSIK-NQNGKVTVADLPPVMA 50 (743)
Q Consensus 26 l~~~F~~~D-~~~G~I~~~el~~~l~ 50 (743)
++++|..+| +++|.|+..|+..+++
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 455666666 6666666666666655
No 95
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=92.89 E-value=0.12 Score=33.32 Aligned_cols=28 Identities=21% Similarity=0.264 Sum_probs=24.9
Q ss_pred HHHHHHHHHcCCCCCccCHHHHHHHHHh
Q 004588 63 DIKGILAESYAGAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 63 ei~~~i~e~d~d~dg~I~feeFl~~~~~ 90 (743)
|++.+++.+|.+++|.|++++|..++..
T Consensus 1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 4678999999999999999999998864
No 96
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=92.48 E-value=0.18 Score=62.42 Aligned_cols=84 Identities=26% Similarity=0.368 Sum_probs=65.7
Q ss_pred HHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHHHHHHHHHHcCCCccccccccCCCCChhHHHHHHHHHHHHHHHcC
Q 004588 129 VAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNSAKAIG 208 (743)
Q Consensus 129 ~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~L~~Lle~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L~~~k~~G 208 (743)
.+||..+|+++ || +..+|.+.|++||.|.+|.+...|+.--.+. +...+ .+..-.|++..++++...|
T Consensus 48 k~W~e~cl~ed------L~---pttele~~LRNGV~LAkL~~~f~PD~~~~~~--~~~~~-~frHtdNi~q~~~~me~ig 115 (1401)
T KOG2128|consen 48 KRWIEECLGED------LP---PTTELEEGLRNGVYLAKLGQFFAPDLEQTIY--KANDL-HFRHTDNINQWLRAMESIG 115 (1401)
T ss_pred HHHHHHHhccc------CC---CchHHHHHhhhhhHHHHHHhhcCCcceeeee--ecCCc-eeecchhHHHHHHHHhhcC
Confidence 46999999998 33 4678999999999999999999996543322 11122 4778999999999999999
Q ss_pred Ceeee-cCccccccCch
Q 004588 209 CTVVN-IGTQDLVEGRP 224 (743)
Q Consensus 209 ~~l~~-i~~~DIvdG~~ 224 (743)
++-.- .-..||++|+-
T Consensus 116 lP~iF~~E~~Dvy~~kN 132 (1401)
T KOG2128|consen 116 LPEIFYPETTDVYEGKN 132 (1401)
T ss_pred CCcccccchhhhhcCCC
Confidence 87543 45679999975
No 97
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=92.26 E-value=0.075 Score=58.35 Aligned_cols=71 Identities=14% Similarity=0.255 Sum_probs=50.1
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHHhhh---hcCC--------CCc-HHHHHH--HHHHHcCCCCCccCHHHHHHHH
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMAKLK---AFST--------MFT-EEDIKG--ILAESYAGAGDEIDFEAFLRAY 88 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~---~lg~--------~~t-~~ei~~--~i~e~d~d~dg~I~feeFl~~~ 88 (743)
+.++-+|++|| |+||-|+.+|+..++.-.. .+|. ..+ .-++.. ...-+..++++++++++|++.+
T Consensus 233 ~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~ 312 (489)
T KOG2643|consen 233 RNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQ 312 (489)
T ss_pred ccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHH
Confidence 56778899999 9999999999998874110 1221 111 113333 2334688999999999999999
Q ss_pred HhhhcC
Q 004588 89 INLQGR 94 (743)
Q Consensus 89 ~~~~~~ 94 (743)
.++|..
T Consensus 313 e~Lq~E 318 (489)
T KOG2643|consen 313 ENLQEE 318 (489)
T ss_pred HHHHHH
Confidence 988874
No 98
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.79 E-value=0.25 Score=52.49 Aligned_cols=68 Identities=16% Similarity=0.153 Sum_probs=56.1
Q ss_pred HHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhh
Q 004588 22 ELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQ 92 (743)
Q Consensus 22 e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~ 92 (743)
..+.+...|..+| +++|.|+..||+..+.. .-.....++...-+.+.|.|.||.|+|++|+..+-...
T Consensus 75 ~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~---s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~ 143 (325)
T KOG4223|consen 75 SQERLGKLVPKIDSDSDGFVTESELKAWIMQ---SQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRV 143 (325)
T ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHH---HHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcc
Confidence 3567999999999 99999999999998873 33344556777888999999999999999998876544
No 99
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=90.10 E-value=0.48 Score=52.68 Aligned_cols=89 Identities=16% Similarity=0.246 Sum_probs=66.6
Q ss_pred CCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHH----HcCCCCCccCHHHHHHHHHhhh
Q 004588 18 FTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAE----SYAGAGDEIDFEAFLRAYINLQ 92 (743)
Q Consensus 18 ~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e----~d~d~dg~I~feeFl~~~~~~~ 92 (743)
|+-+....+.-.|-.+| |++|.|+.++|...-. ..++..=++.++.. .-.-.+|+|+|++|+..+..+.
T Consensus 272 FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d------~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e 345 (493)
T KOG2562|consen 272 FSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGD------HTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEE 345 (493)
T ss_pred eeHHHHHHHHHHHhhhccccccccCHHHHHHHhc------cchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhc
Confidence 45555556666688899 9999999999987543 34666777778773 3445789999999999999887
Q ss_pred cCCCCCC-----------CCCCcchHHHHhh
Q 004588 93 GRATTKP-----------GSAKNSSSFLKAS 112 (743)
Q Consensus 93 ~~~~~~~-----------g~~~~s~~~lk~~ 112 (743)
.+.+..+ |+|.++..++..-
T Consensus 346 ~k~t~~SleYwFrclDld~~G~Lt~~el~~f 376 (493)
T KOG2562|consen 346 DKDTPASLEYWFRCLDLDGDGILTLNELRYF 376 (493)
T ss_pred cCCCccchhhheeeeeccCCCcccHHHHHHH
Confidence 7776654 7787777666543
No 100
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=89.13 E-value=1.4 Score=42.79 Aligned_cols=68 Identities=19% Similarity=0.310 Sum_probs=50.1
Q ss_pred HHHHhHhh---h-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhc
Q 004588 26 LKSKFVSI---K-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQG 93 (743)
Q Consensus 26 l~~~F~~~---D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~ 93 (743)
|+++|..| - .+...++...+..+|+...-++..++..+++-++..+...+...|+|++|+.++..+-.
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~ 72 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAE 72 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHH
Confidence 34555555 3 66678999999999995334455799999999999988777788999999999987643
No 101
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=89.05 E-value=0.52 Score=36.61 Aligned_cols=30 Identities=13% Similarity=0.380 Sum_probs=25.7
Q ss_pred CCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHH
Q 004588 18 FTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMA 50 (743)
Q Consensus 18 ~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~ 50 (743)
++.++ +...|..+| +++|+|+.+|+..+|.
T Consensus 22 ~s~~e---~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 22 LSEEE---VDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SCHHH---HHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CCHHH---HHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 66555 667799999 9999999999999987
No 102
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=88.60 E-value=0.93 Score=50.49 Aligned_cols=75 Identities=15% Similarity=0.224 Sum_probs=66.9
Q ss_pred cCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhcCC
Q 004588 17 QFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQGRA 95 (743)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~~~ 95 (743)
++|.++.+.+...|+.+- |-+|+|+-.--+.+|.| ..+.-+|+.-|.+-.|.|.||-+++.||+..|.-+-.+.
T Consensus 224 ~IT~EQReYYvnQFrtvQpDp~gfisGsaAknFFtK-----Sklpi~ELshIWeLsD~d~DGALtL~EFcAAfHLVVaRk 298 (737)
T KOG1955|consen 224 QITPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTK-----SKLPIEELSHIWELSDVDRDGALTLSEFCAAFHLVVARK 298 (737)
T ss_pred ccCHHHHHHHHhhhhcccCCcccccccHHHHhhhhh-----ccCchHHHHHHHhhcccCccccccHHHHHhhHhheeecc
Confidence 689999999999999999 99999999999999984 457788999999999999999999999999997665554
Q ss_pred C
Q 004588 96 T 96 (743)
Q Consensus 96 ~ 96 (743)
+
T Consensus 299 N 299 (737)
T KOG1955|consen 299 N 299 (737)
T ss_pred c
Confidence 4
No 103
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=84.01 E-value=1.4 Score=54.12 Aligned_cols=58 Identities=21% Similarity=0.366 Sum_probs=51.8
Q ss_pred HhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHh
Q 004588 29 KFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 29 ~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~ 90 (743)
.|+.+| |+.|.|+.+|+.++|. -...+|+.|++=++.-+..|.+..++|++|+..+..
T Consensus 4062 tfkeydpdgkgiiskkdf~kame----~~k~ytqse~dfllscae~dend~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAME----GHKHYTQSEIDFLLSCAEADENDMFDYEDFVDRFHE 4120 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHh----ccccchhHHHHHHHHhhccCccccccHHHHHHHhcC
Confidence 488899 9999999999999998 345799999999999999999999999999987754
No 104
>COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms]
Probab=82.23 E-value=1.8 Score=51.42 Aligned_cols=90 Identities=23% Similarity=0.236 Sum_probs=66.4
Q ss_pred HHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHHHHHHHHHHcCCCccccccccCCCCChhHHHHHHHHHHHHHHHcCC
Q 004588 130 AHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNSAKAIGC 209 (743)
Q Consensus 130 ~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~L~~Lle~l~~~~i~~~~i~~~~~~~~~~~~eNv~~~L~~~k~~G~ 209 (743)
.||...++.. +| -.-+.+.|+.||.|.+|.+++.|+..-. |-.. ..-.+..-.|++.+|+++...|+
T Consensus 51 ~WIee~~~~~------l~----~~~fe~slRnGV~La~l~q~f~pd~~~~--iF~~-~~LQfrHtdNIN~Fld~i~~vGl 117 (1054)
T COG5261 51 IWIEEVIEEA------LP----ELCFEDSLRNGVFLAKLTQRFNPDLTTV--IFPA-DKLQFRHTDNINAFLDLIEHVGL 117 (1054)
T ss_pred HHHHHHhccC------Cc----hhhHHHHHhccchHHHHHHHhCCCceeE--eeec-ccceeeccccHHHHHhHhhhcCC
Confidence 4999999886 33 4557889999999999999999987632 2222 12256788999999999999998
Q ss_pred eeee-cCccccccCchhhHhhhhhhh
Q 004588 210 TVVN-IGTQDLVEGRPHLILGLISQI 234 (743)
Q Consensus 210 ~l~~-i~~~DIvdG~~~liLgLiW~L 234 (743)
+-.- +--.|+++|.- +-.+|++|
T Consensus 118 Pe~FhFEl~DlYekKN--~pkViyci 141 (1054)
T COG5261 118 PESFHFELQDLYEKKN--IPKVIYCI 141 (1054)
T ss_pred cceeeeehHhhhccCC--cchhHHHH
Confidence 7432 66789999853 44444443
No 105
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=81.40 E-value=2.4 Score=34.16 Aligned_cols=30 Identities=13% Similarity=0.341 Sum_probs=24.3
Q ss_pred HHHH-HHHHHHhHhhh-CCCCeeeHHhHHHHH
Q 004588 20 QVEL-RSLKSKFVSIK-NQNGKVTVADLPPVM 49 (743)
Q Consensus 20 ~~e~-~~l~~~F~~~D-~~~G~I~~~el~~~l 49 (743)
+.+. +.+..+|+.+| +++|.|+.+|+..+|
T Consensus 35 ~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 35 DEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4443 35677799999 999999999998875
No 106
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=80.63 E-value=1.4 Score=48.71 Aligned_cols=60 Identities=5% Similarity=0.046 Sum_probs=44.0
Q ss_pred CCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhcCCCCC
Q 004588 37 NGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQGRATTK 98 (743)
Q Consensus 37 ~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~~~~~~ 98 (743)
.+.|+..+++++... ..|..+++--++-++.-+|.|+||.++++||+.+|.+.--++...
T Consensus 402 g~~i~~~~f~raa~~--vtGveLSdhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~Rmhrgl~~ 461 (489)
T KOG2643|consen 402 GASIDEKTFQRAAKV--VTGVELSDHVVDVVFTIFDENNDGTLSHKEFLAVMKRRMHRGLEL 461 (489)
T ss_pred CCCCCHHHHHHHHHH--hcCcccccceeeeEEEEEccCCCCcccHHHHHHHHHHHhhccccC
Confidence 456666666666664 567777766566677788999999999999999998754443333
No 107
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=80.24 E-value=4.3 Score=44.93 Aligned_cols=28 Identities=18% Similarity=0.443 Sum_probs=25.1
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHHh
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMAK 51 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~k 51 (743)
.+|...|+.+| +++|+|+..+-..+|..
T Consensus 464 sdL~~eF~~~D~~ksG~lsis~Wa~~mE~ 492 (631)
T KOG0377|consen 464 SDLEDEFRKYDPKKSGKLSISHWAKCMEN 492 (631)
T ss_pred hHHHHHHHhcChhhcCeeeHHHHHHHHHH
Confidence 35788899999 99999999999999885
No 108
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=79.68 E-value=2 Score=45.84 Aligned_cols=61 Identities=8% Similarity=0.054 Sum_probs=33.7
Q ss_pred HHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Q 004588 25 SLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYI 89 (743)
Q Consensus 25 ~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~ 89 (743)
.++-+|+.|+ ..||++..++|..+++- .+|. .+-.+-.++++.+...+|+|.|++|-+++.
T Consensus 297 iiq~afk~f~v~eDg~~ge~~ls~ilq~--~lgv--~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~ 358 (412)
T KOG4666|consen 297 IIQYAFKRFSVAEDGISGEHILSLILQV--VLGV--EVLRVPVLFPSIEQKDDPKIYASNFRKFAA 358 (412)
T ss_pred HHHHHHHhcccccccccchHHHHHHHHH--hcCc--ceeeccccchhhhcccCcceeHHHHHHHHH
Confidence 4555666666 66666666666666553 3342 222344455555555566666666666554
No 109
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=76.64 E-value=4.7 Score=41.26 Aligned_cols=61 Identities=20% Similarity=0.239 Sum_probs=51.0
Q ss_pred HHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHH
Q 004588 25 SLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAY 88 (743)
Q Consensus 25 ~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~ 88 (743)
..++-=..+| +++|.+|.+||...+. -+....+-.++..+|.-.|.+++..++.++.++.-
T Consensus 282 RkkEFeElIDsNhDGivTaeELe~y~d---P~n~~~alne~~~~ma~~d~n~~~~Ls~eell~r~ 343 (362)
T KOG4251|consen 282 RKKEFEELIDSNHDGIVTAEELEDYVD---PQNFRLALNEVNDIMALTDANNDEKLSLEELLERD 343 (362)
T ss_pred HHHHHHHHhhcCCccceeHHHHHhhcC---chhhhhhHHHHHHHHhhhccCCCcccCHHHHHHHH
Confidence 3444445679 9999999999999977 56777888899999999999999999999988753
No 110
>KOG3000 consensus Microtubule-binding protein involved in cell cycle control [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=74.05 E-value=5.5 Score=42.52 Aligned_cols=88 Identities=20% Similarity=0.327 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHhhhcCCCcccccCCCCCcchHHHHHHHHhhCCCCCCC-----CCCCCCCHHHHHHHHHHhhhhcCCccc
Q 004588 270 EKVLLKWMNYHLKKAGYEKPVTNFSSDLKDGKAYTYLLNVLAPEHCNP-----ATLDMKDPTERAKLVLDHAERMDCKRY 344 (743)
Q Consensus 270 e~~LL~Wvn~~L~~~~~~~~V~nFssd~~DG~al~~Ll~~~~P~~~~~-----~~l~~~~~~~n~~~a~~~ae~lgi~~~ 344 (743)
..-+|.|+|..+.. ++. +|. +...|-|+|-|.+.+.|..++. .+-.+-+...|.+..=+...++|+...
T Consensus 17 R~E~laW~N~~l~~-n~~-kIE----e~~tGaaycqlmd~l~p~~i~lkkVkf~A~~Ehe~i~Nfk~lQ~~f~klgi~k~ 90 (295)
T KOG3000|consen 17 RLEILAWINDLLQL-NLT-KIE----ELCTGAAYCQLMDMLFPPDIPLKKVKFAARLEHEYIPNFKVLQTCFNKLGIDKV 90 (295)
T ss_pred hHHHHHHHHhhhhc-chh-hhh----hhcccchhhhhhhhccCCccccccccccccccchhhhhhHHHHHHHHhcCCccc
Confidence 34589999987663 221 333 4566899999999999987744 444455677788777777778999999
Q ss_pred cCcccccccCccchHHhHh
Q 004588 345 LSPKDIVEGSANLNLAFVA 363 (743)
Q Consensus 345 l~peDi~~~~~d~~l~yls 363 (743)
+.+++++.+..--++-|+-
T Consensus 91 v~vdkLvKg~~qDNlEF~q 109 (295)
T KOG3000|consen 91 VDVDKLVKGPFQDNLEFLQ 109 (295)
T ss_pred ccHHHHhcccccchHHHHH
Confidence 9999999998654455443
No 111
>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms. The different members of the Homo sapiens gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three Homo sapiens HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas the central coiled-coil motif mediates homodimerisation and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes [], whereas both HOOK1 and HOOK2 are localised to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head [].; GO: 0008017 microtubule binding, 0000226 microtubule cytoskeleton organization, 0005737 cytoplasm; PDB: 1WIX_A.
Probab=72.63 E-value=4.5 Score=49.09 Aligned_cols=70 Identities=19% Similarity=0.318 Sum_probs=43.8
Q ss_pred hHHHHHHHHhhcCCccccchhHhhhhHHHHHHHHHHhCCCCccccc---cCCCCCCChhHHHHHHHHHHHHHHh
Q 004588 395 ERCFRLWINSLGIATYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQ---ASKPPIKMPFRKVENCNQVIKIGKQ 465 (743)
Q Consensus 395 ~~~f~~WiN~~~~~~~v~dl~~Dl~DG~~L~~Lle~ls~~~v~~k~---~~~~~~~~~~~~ieN~~~~l~~~k~ 465 (743)
..++..|||++....++.+ +.||.||++|.+++..|-|..++-.+ ++..++....-++.|+..+++-++.
T Consensus 9 ~~~Lv~Wv~tf~~~~~~~~-~~dL~DGv~L~evL~qIDp~~F~~~~l~~i~~~~~~nw~lr~~NLk~l~~~i~~ 81 (713)
T PF05622_consen 9 CDSLVTWVQTFNLSAPCSS-YEDLSDGVALAEVLHQIDPEYFNDSWLSRIKEDVGDNWRLRVSNLKKLLRNIKS 81 (713)
T ss_dssp HHHHHHHHTT---SS---S-HHHHTTSHHHHHHHHHH-TTTS-HHHHTT--SGGGG-SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCC-HHHccchHHHHHHHHHhCccccCcHHhhcCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 3578999999865545554 88999999999999999999876222 2222222334478888888877663
No 112
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=70.81 E-value=5.5 Score=36.72 Aligned_cols=25 Identities=16% Similarity=0.336 Sum_probs=22.5
Q ss_pred HHHHhHhhh-CCCCeeeHHhHHHHHH
Q 004588 26 LKSKFVSIK-NQNGKVTVADLPPVMA 50 (743)
Q Consensus 26 l~~~F~~~D-~~~G~I~~~el~~~l~ 50 (743)
+...|..+| |++|+||.+|+..++.
T Consensus 82 ~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 82 IKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 467899999 9999999999999885
No 113
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=70.26 E-value=3.1 Score=43.93 Aligned_cols=95 Identities=17% Similarity=0.214 Sum_probs=61.8
Q ss_pred HHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCC----CcHHHH-----------HHHHHHHcCCCCCccCHHHHHHHHHh
Q 004588 27 KSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTM----FTEEDI-----------KGILAESYAGAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 27 ~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~----~t~~ei-----------~~~i~e~d~d~dg~I~feeFl~~~~~ 90 (743)
+.-|...| |++|.++-.||..+|.+ .+-.. -.++++ .-+|+++|.|.|.-|+.+||+.--.+
T Consensus 247 KTFF~LHD~NsDGfldeqELEaLFtk--ELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~ 324 (442)
T KOG3866|consen 247 KTFFALHDLNSDGFLDEQELEALFTK--ELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDN 324 (442)
T ss_pred chheeeeccCCcccccHHHHHHHHHH--HHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhh
Confidence 34588899 99999999999999985 44321 122223 23678889999999999999976433
Q ss_pred hhcCCCCCCCCCCcchHHHHhhhcccccccchhhhhHHHHHHHh
Q 004588 91 LQGRATTKPGSAKNSSSFLKASTTTLLHTISESEKASYVAHINS 134 (743)
Q Consensus 91 ~~~~~~~~~g~~~~s~~~lk~~~~~~~~~~~~~e~~~f~~WIN~ 134 (743)
.....+ ++ ++ -+-+....|+++|.+.|-+=+-.
T Consensus 325 kef~~p-~e--~W--------Etl~q~~~yTeEEL~~fE~e~A~ 357 (442)
T KOG3866|consen 325 KEFNPP-KE--EW--------ETLGQKKVYTEEELQQFEREYAQ 357 (442)
T ss_pred cccCCc-ch--hh--------hhhcccccccHHHHHHHHHHHHH
Confidence 211111 11 11 12234567888888888775433
No 114
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=67.89 E-value=6.5 Score=46.40 Aligned_cols=62 Identities=10% Similarity=0.210 Sum_probs=54.2
Q ss_pred HHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHH
Q 004588 22 ELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAY 88 (743)
Q Consensus 22 e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~ 88 (743)
....++..|..+| ..+|+++-..-+.+|.. ..++...+..|..-.|.|+||+++-+||+-.|
T Consensus 193 ~klKY~QlFNa~DktrsG~Lsg~qaR~aL~q-----S~Lpq~~LA~IW~LsDvd~DGkL~~dEfilam 255 (1118)
T KOG1029|consen 193 NKLKYRQLFNALDKTRSGYLSGQQARSALGQ-----SGLPQNQLAHIWTLSDVDGDGKLSADEFILAM 255 (1118)
T ss_pred hhhHHHHHhhhcccccccccccHHHHHHHHh-----cCCchhhHhhheeeeccCCCCcccHHHHHHHH
Confidence 3567999999999 99999999999998872 35788899999999999999999999997655
No 115
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=65.84 E-value=2.8 Score=34.87 Aligned_cols=53 Identities=17% Similarity=0.219 Sum_probs=35.2
Q ss_pred HHHHHHhHhhhCCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCC-------CCCccCHHHHHH
Q 004588 24 RSLKSKFVSIKNQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAG-------AGDEIDFEAFLR 86 (743)
Q Consensus 24 ~~l~~~F~~~D~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d-------~dg~I~feeFl~ 86 (743)
+.+.++|+.+-++.++||.+||++.|.. ++.+-+++.+..- ..|..||..|++
T Consensus 6 eqv~~aFr~lA~~KpyVT~~dLr~~l~p----------e~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~ 65 (69)
T PF08726_consen 6 EQVEEAFRALAGGKPYVTEEDLRRSLTP----------EQAEYCISRMPPYEGPDGDAIPGAYDYESFTN 65 (69)
T ss_dssp HHHHHHHHHHCTSSSCEEHHHHHHHS-C----------CCHHHHHCCSEC--SSS----TTEEECHHHHC
T ss_pred HHHHHHHHHHHcCCCcccHHHHHHHcCc----------HHHHHHHHHCcccCCCCcCCCCCCcCHHHHHH
Confidence 5688999999866799999999987661 1223333333222 226799999975
No 116
>PF07462 MSP1_C: Merozoite surface protein 1 (MSP1) C-terminus; InterPro: IPR010901 This entry represents the C-terminal region of merozoite surface protein 1 (MSP1), which is found in a number of Plasmodium species. MSP-1 is a 200 kDa protein expressed on the surface of the Plasmodium vivax merozoite. MSP-1 of Plasmodium species is synthesised as a high-molecular-weight precursor and then processed into several fragments. At the time of red cell invasion by the merozoite, only the 19 kDa C-terminal fragment (MSP-119), which contains two epidermal growth factor-like domains, remains on the surface. Antibodies against MSP-119 inhibit merozoite entry into red cells, and immunisation with MSP-119 protects monkeys from challenging infections. Hence, MSP-119 is considered a promising vaccine candidate [].; GO: 0009405 pathogenesis, 0016020 membrane
Probab=64.54 E-value=41 Score=38.67 Aligned_cols=39 Identities=26% Similarity=0.233 Sum_probs=21.6
Q ss_pred HHHHHhHHH--HHHHHH-HcCCCcccCcchhccCCchHHHHHHHHHH-HHhh
Q 004588 574 EEKRLNATY--IISVAR-KLGCSIFLLPEDIMEVNQKMILTLTASIM-YWSL 621 (743)
Q Consensus 574 ~~~~~n~~~--a~~~A~-~lGi~~ll~peDi~~~d~k~iltyls~~~-~~~~ 621 (743)
++-+.|++. +++-.| +||=-.=| +|.-++|||+-. |.|.
T Consensus 182 EdNylnlEkFrvlSrlEgrl~~Ni~L---------eKenIsYlSsgLhHv~t 224 (574)
T PF07462_consen 182 EDNYLNLEKFRVLSRLEGRLGKNINL---------EKENISYLSSGLHHVFT 224 (574)
T ss_pred hhhhhhHHHHHHHHHHHHHhcccccc---------chhhhhhhhhhHHHHHH
Confidence 455566663 334444 56654433 355579999865 4444
No 117
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=64.24 E-value=7.9 Score=29.41 Aligned_cols=29 Identities=10% Similarity=0.067 Sum_probs=25.1
Q ss_pred HHHHHHHHcCCCCCccCHHHHHHHHHhhh
Q 004588 64 IKGILAESYAGAGDEIDFEAFLRAYINLQ 92 (743)
Q Consensus 64 i~~~i~e~d~d~dg~I~feeFl~~~~~~~ 92 (743)
+..++..+|.+++|.|++++|..++..+.
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~ 30 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG 30 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 56788899999999999999999987653
No 118
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=64.24 E-value=7.2 Score=43.89 Aligned_cols=84 Identities=14% Similarity=0.104 Sum_probs=49.2
Q ss_pred HHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcC---CCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhcCC-----
Q 004588 25 SLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFS---TMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQGRA----- 95 (743)
Q Consensus 25 ~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg---~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~~~----- 95 (743)
....+|..|| .++|.++.+++..++.+..-.. ...+.+-|+- .+..+..-.++|.+|.+++.+++...
T Consensus 109 l~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~---~Fg~~~~r~~ny~~f~Q~lh~~~~E~~~qaf 185 (694)
T KOG0751|consen 109 LFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKL---HFGDIRKRHLNYAEFTQFLHEFQLEHAEQAF 185 (694)
T ss_pred HHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHH---HhhhHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 3667888888 8888888888888888431111 1223333332 23333334588888888887665422
Q ss_pred --CCCCCCCCcchHHHHh
Q 004588 96 --TTKPGSAKNSSSFLKA 111 (743)
Q Consensus 96 --~~~~g~~~~s~~~lk~ 111 (743)
..+.+++.++.-....
T Consensus 186 r~~d~~~ng~is~Ldfq~ 203 (694)
T KOG0751|consen 186 REKDKAKNGFISVLDFQD 203 (694)
T ss_pred HHhcccCCCeeeeechHh
Confidence 3334666655443333
No 119
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=64.20 E-value=7.7 Score=33.92 Aligned_cols=28 Identities=18% Similarity=0.411 Sum_probs=25.2
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHHh
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMAK 51 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~k 51 (743)
.++.+.|+.+| |++|.|+.+|+..+|.+
T Consensus 47 ~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 47 EGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 56888899999 99999999999998884
No 120
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=61.77 E-value=8.9 Score=33.67 Aligned_cols=28 Identities=11% Similarity=0.222 Sum_probs=24.3
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHHh
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMAK 51 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~k 51 (743)
.++.+.|+.+| +++|.|+.+|+..+|.+
T Consensus 53 ~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 53 MLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 35777888999 99999999999999884
No 121
>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms. The different members of the Homo sapiens gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three Homo sapiens HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas the central coiled-coil motif mediates homodimerisation and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes [], whereas both HOOK1 and HOOK2 are localised to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head [].; GO: 0008017 microtubule binding, 0000226 microtubule cytoskeleton organization, 0005737 cytoplasm; PDB: 1WIX_A.
Probab=58.64 E-value=15 Score=44.69 Aligned_cols=71 Identities=18% Similarity=0.164 Sum_probs=44.2
Q ss_pred hhhHHHHHHHhhhCCCCcccccCCCCCChhhHHHHhhhhHHHHHHHHHHcCCCccccc---cccCCCCChhHHHHHHHHH
Q 004588 124 EKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERA---INTKRVINPWERNENHTLC 200 (743)
Q Consensus 124 e~~~f~~WIN~~L~~~~~~~~~lp~~~~v~dl~~dl~DGv~L~~Lle~l~~~~i~~~~---i~~~~~~~~~~~~eNv~~~ 200 (743)
-...++.|||.. .-. .++ +=+.||.||++|..++..+-|....... ++.....+..-++.|+..+
T Consensus 8 l~~~Lv~Wv~tf-~~~----------~~~-~~~~dL~DGv~L~evL~qIDp~~F~~~~l~~i~~~~~~nw~lr~~NLk~l 75 (713)
T PF05622_consen 8 LCDSLVTWVQTF-NLS----------APC-SSYEDLSDGVALAEVLHQIDPEYFNDSWLSRIKEDVGDNWRLRVSNLKKL 75 (713)
T ss_dssp HHHHHHHHHTT----S----------S----SHHHHTTSHHHHHHHHHH-TTTS-HHHHTT--SGGGG-SHHHHHHHHHH
T ss_pred HHHHHHHHHHHC-CCC----------CCc-CCHHHccchHHHHHHHHHhCccccCcHHhhcCCCCCCccHHHHHHHHHHH
Confidence 456789999994 221 112 3478999999999999999998765322 2222122344588999888
Q ss_pred HHHHHH
Q 004588 201 LNSAKA 206 (743)
Q Consensus 201 L~~~k~ 206 (743)
+..++.
T Consensus 76 ~~~i~~ 81 (713)
T PF05622_consen 76 LRNIKS 81 (713)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877764
No 122
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=57.98 E-value=6.2 Score=34.56 Aligned_cols=27 Identities=19% Similarity=0.418 Sum_probs=23.7
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHH
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMA 50 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~ 50 (743)
+++.+.|..+| +++|.|+.+|+..+|.
T Consensus 51 ~ei~~~~~~~D~~~dg~I~f~eF~~l~~ 78 (94)
T cd05031 51 MAVDKIMKDLDQNRDGKVNFEEFVSLVA 78 (94)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 45677788899 9999999999999988
No 123
>PRK14954 DNA polymerase III subunits gamma and tau; Provisional
Probab=56.78 E-value=60 Score=38.80 Aligned_cols=25 Identities=20% Similarity=0.170 Sum_probs=15.3
Q ss_pred CCCCCCCCCcccccccccccccccc
Q 004588 698 ASPAPSVSGEDEISSLSGDVSNLTI 722 (743)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (743)
++|+.+..++=++.++.+..+++++
T Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (620)
T PRK14954 451 PRNVASGKPGVDLGSWQGKFMNFTR 475 (620)
T ss_pred ccccccCCcccccHhhhhhcccccc
Confidence 3445555566677777766666654
No 124
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=56.47 E-value=21 Score=42.52 Aligned_cols=72 Identities=17% Similarity=0.297 Sum_probs=61.9
Q ss_pred HHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhcC
Q 004588 20 QVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQGR 94 (743)
Q Consensus 20 ~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~~ 94 (743)
.....-+...|...| +++|.++..+...+++ .+...+.+..+..+++|.+...++++.+++|.+....+..+
T Consensus 132 ~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~---~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~r 204 (746)
T KOG0169|consen 132 SRREHWIHSIFQEADKNKNGHMSFDEVLDLLK---QLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKR 204 (746)
T ss_pred chHHHHHHHHHHHHccccccccchhhHHHHHH---HHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccC
Confidence 344556889999999 9999999999999999 57777888889999999988899999999999998776554
No 125
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=56.27 E-value=18 Score=34.33 Aligned_cols=61 Identities=15% Similarity=0.240 Sum_probs=41.5
Q ss_pred Hhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHH--HHHHHcCCCCCccCHHHHHHHHHhhhcCC
Q 004588 31 VSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKG--ILAESYAGAGDEIDFEAFLRAYINLQGRA 95 (743)
Q Consensus 31 ~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~--~i~e~d~d~dg~I~feeFl~~~~~~~~~~ 95 (743)
..|- +|.|.++.+++-.++. -+.+..+ .+++. .++-+|-|+|+.|.-++....+..+....
T Consensus 78 e~FSeDG~GnlsfddFlDmfS---V~sE~AP-rdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~e 141 (189)
T KOG0038|consen 78 EVFSEDGRGNLSFDDFLDMFS---VFSEMAP-RDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDE 141 (189)
T ss_pred HHhccCCCCcccHHHHHHHHH---HHHhhCh-HHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhcc
Confidence 3445 8888899998888887 4555333 33433 45667888888888888777777665433
No 126
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=56.25 E-value=13 Score=32.38 Aligned_cols=32 Identities=9% Similarity=0.288 Sum_probs=25.1
Q ss_pred cCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHh
Q 004588 17 QFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAK 51 (743)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k 51 (743)
++++++ +.+.|+.+| +++|+|+.+||-.+|.+
T Consensus 47 k~t~~e---v~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 47 KLQDAE---IAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred CCCHHH---HHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 455554 455688889 99999999999988874
No 127
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=56.18 E-value=66 Score=28.28 Aligned_cols=64 Identities=16% Similarity=0.259 Sum_probs=42.4
Q ss_pred HHHHHHhHhhhCCCCeeeHHhHHHHHHhh----hhcCCC----CcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Q 004588 24 RSLKSKFVSIKNQNGKVTVADLPPVMAKL----KAFSTM----FTEEDIKGILAESYAGAGDEIDFEAFLRAYI 89 (743)
Q Consensus 24 ~~l~~~F~~~D~~~G~I~~~el~~~l~k~----~~lg~~----~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~ 89 (743)
++++-.|..+.|.+|.++...|...|+.+ ..+|+. ..+.-++..+... .....|+-++|+.-+.
T Consensus 3 dKyRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~ 74 (90)
T PF09069_consen 3 DKYRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDWLM 74 (90)
T ss_dssp HHHHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHHHH
Confidence 57888999998889999999998888744 234542 2677777787776 2456799999999774
No 128
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=55.45 E-value=12 Score=32.37 Aligned_cols=27 Identities=15% Similarity=0.463 Sum_probs=23.9
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHH
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMA 50 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~ 50 (743)
.++.+.|..+| +++|.|+.+|+..+|.
T Consensus 51 ~~v~~i~~~~D~d~dG~I~f~eF~~~~~ 78 (88)
T cd05030 51 KAIDKIFEDLDTNQDGQLSFEEFLVLVI 78 (88)
T ss_pred HHHHHHHHHcCCCCCCcCcHHHHHHHHH
Confidence 55777889999 9999999999999887
No 129
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=54.83 E-value=14 Score=32.32 Aligned_cols=28 Identities=11% Similarity=0.304 Sum_probs=24.0
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHHh
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMAK 51 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~k 51 (743)
.++.+.|+.+| |++|.|+.+|+..+|.+
T Consensus 52 ~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 52 GVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 45667788999 99999999999998884
No 130
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=52.82 E-value=15 Score=29.12 Aligned_cols=27 Identities=15% Similarity=0.256 Sum_probs=23.3
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHH
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMA 50 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~ 50 (743)
+++.+.|..+| +++|.|+.+|+..++.
T Consensus 33 ~~~~~i~~~~d~~~~g~i~~~ef~~~~~ 60 (67)
T cd00052 33 SVLAQIWDLADTDKDGKLDKEEFAIAMH 60 (67)
T ss_pred HHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence 34677799999 9999999999998876
No 131
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=51.38 E-value=24 Score=44.80 Aligned_cols=81 Identities=19% Similarity=0.259 Sum_probs=59.7
Q ss_pred HHHHHhhcCC--ccccchhHhhhhHHHHHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHHHHHhhhcccc-CCCC
Q 004588 399 RLWINSLGIA--TYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQASKPPIKMPFRKVENCNQVIKIGKQLKFSLV-NVAG 475 (743)
Q Consensus 399 ~~WiN~~~~~--~~v~dl~~Dl~DG~~L~~Lle~ls~~~v~~k~~~~~~~~~~~~~ieN~~~~l~~~k~~g~~l~-nI~~ 475 (743)
.+||-..+.+ ++-.+|.+.||+|+.|++|.+...|+..- ..+.. . ...|..-.|+++-+++++..|+.-. -.--
T Consensus 48 k~W~e~cl~edL~pttele~~LRNGV~LAkL~~~f~PD~~~-~~~~~-~-~~~frHtdNi~q~~~~me~iglP~iF~~E~ 124 (1401)
T KOG2128|consen 48 KRWIEECLGEDLPPTTELEEGLRNGVYLAKLGQFFAPDLEQ-TIYKA-N-DLHFRHTDNINQWLRAMESIGLPEIFYPET 124 (1401)
T ss_pred HHHHHHHhcccCCCchHHHHHhhhhhHHHHHHhhcCCccee-eeeec-C-CceeecchhHHHHHHHHhhcCCCcccccch
Confidence 7899997654 45678999999999999999999996542 22222 2 2348899999999999997665311 1233
Q ss_pred cccccCh
Q 004588 476 NDFVQGN 482 (743)
Q Consensus 476 ~DIvdG~ 482 (743)
.||.+|.
T Consensus 125 ~Dvy~~k 131 (1401)
T KOG2128|consen 125 TDVYEGK 131 (1401)
T ss_pred hhhhcCC
Confidence 6899985
No 132
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=50.33 E-value=8.4 Score=41.93 Aligned_cols=84 Identities=18% Similarity=0.219 Sum_probs=60.2
Q ss_pred chHhhhcCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHH-HHcCCCCCccCHHHHHHHH
Q 004588 11 DQWLQSQFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILA-ESYAGAGDEIDFEAFLRAY 88 (743)
Q Consensus 11 ~~~l~~~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~-e~d~d~dg~I~feeFl~~~ 88 (743)
|+.++..++. -+.++++|+.+| .++|+|+..-++.+|. ++...+++.+.-.+++ .+|..+-|-|-.++|+..+
T Consensus 298 d~~l~~~~~~--s~q~rR~f~a~d~~d~nfis~s~~~~vm~---~~N~~vse~a~v~l~~~~l~pE~~~iil~~d~lg~~ 372 (449)
T KOG2871|consen 298 DGHLVVPENP--SEQLRRNFHAYDPEDNNFISCSGLQIVMT---ALNRLVSEPAYVMLMRQPLDPESLGIILLEDFLGEF 372 (449)
T ss_pred CccccCCCCC--CHHHHhhhhccCccCCCeeecHHHHHHHH---HhcccccCHHHHHHhcCccChhhcceEEeccccccc
Confidence 4545555554 356999999999 8899999999999999 7776677665555544 4677777777778888777
Q ss_pred HhhhcCCCCCC
Q 004588 89 INLQGRATTKP 99 (743)
Q Consensus 89 ~~~~~~~~~~~ 99 (743)
.........+.
T Consensus 373 ~p~tgs~g~~~ 383 (449)
T KOG2871|consen 373 FPTTGSSGPGA 383 (449)
T ss_pred cCccccCCCcc
Confidence 66555444443
No 133
>COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms]
Probab=49.84 E-value=16 Score=43.80 Aligned_cols=96 Identities=19% Similarity=0.306 Sum_probs=69.2
Q ss_pred HHHHHHHhhhcCCCcccccCCCCCcchHHHHHHHHhhCCCCCC---C-CCCCCCCHHHHHHHHHHhhhhcCCcc--ccCc
Q 004588 274 LKWMNYHLKKAGYEKPVTNFSSDLKDGKAYTYLLNVLAPEHCN---P-ATLDMKDPTERAKLVLDHAERMDCKR--YLSP 347 (743)
Q Consensus 274 L~Wvn~~L~~~~~~~~V~nFssd~~DG~al~~Ll~~~~P~~~~---~-~~l~~~~~~~n~~~a~~~ae~lgi~~--~l~p 347 (743)
-.|+-..+..+ .+-.-|..+.++|..++.|...+.|+..- + +.+. -...+|+..-++..+..|+|. ..+.
T Consensus 50 K~WIee~~~~~---l~~~~fe~slRnGV~La~l~q~f~pd~~~~iF~~~~LQ-frHtdNIN~Fld~i~~vGlPe~FhFEl 125 (1054)
T COG5261 50 KIWIEEVIEEA---LPELCFEDSLRNGVFLAKLTQRFNPDLTTVIFPADKLQ-FRHTDNINAFLDLIEHVGLPESFHFEL 125 (1054)
T ss_pred HHHHHHHhccC---CchhhHHHHHhccchHHHHHHHhCCCceeEeeecccce-eeccccHHHHHhHhhhcCCcceeeeeh
Confidence 45988877653 23567889999999999999999999851 1 2332 355689999999999999998 5788
Q ss_pred ccccccC--ccch--HHhHhhhhhhcCCCCc
Q 004588 348 KDIVEGS--ANLN--LAFVAQVFHQRSGLTT 374 (743)
Q Consensus 348 eDi~~~~--~d~~--l~yls~l~~~~~~~~~ 374 (743)
.|+.++. |+.+ +--++++. ..||..+
T Consensus 126 ~DlYekKN~pkViyciHaL~~~l-s~~g~tp 155 (1054)
T COG5261 126 QDLYEKKNIPKVIYCIHALISML-SWPGKTP 155 (1054)
T ss_pred HhhhccCCcchhHHHHHHHHHHh-cCCCCCc
Confidence 9999986 6622 22222222 5677665
No 134
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=48.53 E-value=40 Score=37.86 Aligned_cols=58 Identities=12% Similarity=-0.061 Sum_probs=41.0
Q ss_pred cCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhcCCCCCCCCCCcchHHHHhhhc
Q 004588 55 FSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQGRATTKPGSAKNSSSFLKASTT 114 (743)
Q Consensus 55 lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~~~~~~~g~~~~s~~~lk~~~~ 114 (743)
.|......++..+++-+|.|+||.|+++||+.. ..+ =......|.|+++..+......
T Consensus 327 ~~~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~~-~~~-F~~~D~d~DG~Is~eEf~~~~~ 384 (391)
T PRK12309 327 EGGEAFTHAAQEIFRLYDLDGDGFITREEWLGS-DAV-FDALDLNHDGKITPEEMRAGLG 384 (391)
T ss_pred hccChhhHHHHHHHHHhCCCCCCcCcHHHHHHH-HHH-HHHhCCCCCCCCcHHHHHHHHH
Confidence 366777889999999999999999999999741 111 1122334667777777666543
No 135
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=48.08 E-value=32 Score=26.84 Aligned_cols=27 Identities=11% Similarity=0.231 Sum_probs=23.2
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHH
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMA 50 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~ 50 (743)
+.....|+..| +++|++..+|+....+
T Consensus 21 ~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~ 48 (51)
T PF14788_consen 21 EYARQLFQECDKSQSGRLEGEEFEEFYK 48 (51)
T ss_dssp HHHHHHHHHH-SSSSSEBEHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCCCccHHHHHHHHH
Confidence 45777899999 9999999999999887
No 136
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=47.56 E-value=77 Score=38.01 Aligned_cols=67 Identities=18% Similarity=0.151 Sum_probs=53.1
Q ss_pred CCHHHHHHHHHHhHhhhCCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Q 004588 18 FTQVELRSLKSKFVSIKNQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYI 89 (743)
Q Consensus 18 ~t~~e~~~l~~~F~~~D~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~ 89 (743)
+|.+|.....+.|..+.-+.|+||.+.-+.+|.+ -| ++.--+.+|..-.|.|+||++|..||--.|.
T Consensus 10 vT~~Er~K~~~qF~~Lkp~~gfitg~qArnfflq---S~--LP~~VLaqIWALsDldkDGrmdi~EfSIAmk 76 (1118)
T KOG1029|consen 10 VTDEERQKHDAQFGQLKPGQGFITGDQARNFFLQ---SG--LPTPVLAQIWALSDLDKDGRMDIREFSIAMK 76 (1118)
T ss_pred cchHHHHHHHHHHhccCCCCCccchHhhhhhHHh---cC--CChHHHHHHHHhhhcCccccchHHHHHHHHH
Confidence 4666666666666666677899999999998873 33 5556788999999999999999999976663
No 137
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=46.52 E-value=21 Score=30.97 Aligned_cols=28 Identities=14% Similarity=0.324 Sum_probs=24.1
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHHh
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMAK 51 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~k 51 (743)
.++++.|..+| +++|.|+.+++..++.+
T Consensus 52 ~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 52 DAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 45777888899 99999999999998873
No 138
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=45.32 E-value=32 Score=38.75 Aligned_cols=63 Identities=14% Similarity=0.246 Sum_probs=44.3
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHH----hhhhcCC-CCc-HHHHHHHHHHHcCCCCCccCHHHHHH
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMA----KLKAFST-MFT-EEDIKGILAESYAGAGDEIDFEAFLR 86 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~----k~~~lg~-~~t-~~ei~~~i~e~d~d~dg~I~feeFl~ 86 (743)
..+.=.|+.+| +++|.++..||+...+ ++..+|. .+. ++-+.+|++-+.+...++|+..+|+.
T Consensus 351 ~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 351 ASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDALCQIRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred cchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCccCCCceeHHHHhh
Confidence 45667799999 9999999999987655 2234443 233 34445666666766778888888775
No 139
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=45.18 E-value=28 Score=30.50 Aligned_cols=29 Identities=3% Similarity=-0.046 Sum_probs=24.7
Q ss_pred HHHHHHHHHHcCCCCCccCHHHHHHHHHh
Q 004588 62 EDIKGILAESYAGAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 62 ~ei~~~i~e~d~d~dg~I~feeFl~~~~~ 90 (743)
+++.+++..+|.|++|.|+++++.+++..
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~ 38 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLK 38 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 35567788999999999999999999854
No 140
>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]
Probab=42.19 E-value=1.2e+02 Score=36.64 Aligned_cols=8 Identities=38% Similarity=0.414 Sum_probs=4.0
Q ss_pred HHHHHhhc
Q 004588 399 RLWINSLG 406 (743)
Q Consensus 399 ~~WiN~~~ 406 (743)
...||.+.
T Consensus 309 mq~INal~ 316 (1102)
T KOG1924|consen 309 MQFINALV 316 (1102)
T ss_pred HHHHHHhc
Confidence 33566553
No 141
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=42.05 E-value=34 Score=29.28 Aligned_cols=29 Identities=14% Similarity=0.182 Sum_probs=25.3
Q ss_pred HHHHHHHHHHcC--CCCCccCHHHHHHHHHh
Q 004588 62 EDIKGILAESYA--GAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 62 ~ei~~~i~e~d~--d~dg~I~feeFl~~~~~ 90 (743)
+++...+..+|. |++|.|++++|..++..
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~ 38 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLET 38 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHH
Confidence 457778999999 89999999999999864
No 142
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=40.95 E-value=34 Score=30.86 Aligned_cols=36 Identities=14% Similarity=0.277 Sum_probs=27.7
Q ss_pred hHhhhcCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHH
Q 004588 12 QWLQSQFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMA 50 (743)
Q Consensus 12 ~~l~~~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~ 50 (743)
-+..++++.+ .|.+++..-| +++|+++.+||.-+|.
T Consensus 34 ~f~~S~L~~~---~L~~IW~LaD~~~dG~L~~~EF~iAm~ 70 (104)
T PF12763_consen 34 FFMKSGLPRD---VLAQIWNLADIDNDGKLDFEEFAIAMH 70 (104)
T ss_dssp HHHHTTSSHH---HHHHHHHHH-SSSSSEEEHHHHHHHHH
T ss_pred HHHHcCCCHH---HHHHHHhhhcCCCCCcCCHHHHHHHHH
Confidence 3455677754 4666778899 9999999999999888
No 143
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=40.61 E-value=32 Score=34.62 Aligned_cols=36 Identities=17% Similarity=0.248 Sum_probs=29.8
Q ss_pred CcHHHH---HHHHHHHcCCCCCccCHHHHHHHHHhhhcC
Q 004588 59 FTEEDI---KGILAESYAGAGDEIDFEAFLRAYINLQGR 94 (743)
Q Consensus 59 ~t~~ei---~~~i~e~d~d~dg~I~feeFl~~~~~~~~~ 94 (743)
++..+| ..|++.+|.+.||.|++-|..++|.++-.-
T Consensus 93 FsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgap 131 (244)
T KOG0041|consen 93 FSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAP 131 (244)
T ss_pred HHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCc
Confidence 445555 568999999999999999999999887554
No 144
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=40.02 E-value=17 Score=33.23 Aligned_cols=32 Identities=19% Similarity=0.435 Sum_probs=24.2
Q ss_pred CCcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Q 004588 58 MFTEEDIKGILAESYAGAGDEIDFEAFLRAYI 89 (743)
Q Consensus 58 ~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~ 89 (743)
.+|+++++.+-.++-.|..|.+.|-||+.-+.
T Consensus 3 iLtDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs 34 (118)
T PF08976_consen 3 ILTDEQFDRLWNEMPVNAKGRLKYQEFLSKFS 34 (118)
T ss_dssp ---HHHHHHHHTTS-B-TTS-EEHHHHHHHT-
T ss_pred cccHHHhhhhhhhCcCCccCCEeHHHHHHHcc
Confidence 47899999999999999999999999998875
No 145
>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]
Probab=39.44 E-value=1.1e+02 Score=36.82 Aligned_cols=7 Identities=29% Similarity=0.558 Sum_probs=3.3
Q ss_pred HHHHhhh
Q 004588 550 FLELLSS 556 (743)
Q Consensus 550 ~~aLl~~ 556 (743)
+..||+.
T Consensus 456 ~~~liD~ 462 (1102)
T KOG1924|consen 456 LTELIDK 462 (1102)
T ss_pred HHHHHHH
Confidence 4455543
No 146
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=37.97 E-value=35 Score=29.66 Aligned_cols=27 Identities=7% Similarity=0.278 Sum_probs=22.6
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHH
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMA 50 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~ 50 (743)
.++.+.++.+| +++|.|+.+|+..++.
T Consensus 51 ~~v~~~i~~~D~n~dG~v~f~eF~~li~ 78 (88)
T cd05027 51 EVVDKVMETLDSDGDGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 34666677889 9999999999988877
No 147
>PF06395 CDC24: CDC24 Calponin; InterPro: IPR010481 This is a calponin homology domain.
Probab=37.62 E-value=42 Score=29.39 Aligned_cols=66 Identities=18% Similarity=0.235 Sum_probs=39.4
Q ss_pred cccCCCCCCCChHHHHHHhhhcCCCc-eecccccCCCChHHHHHhHHHHHHHH--HHcCCC--cccCcchhccC
Q 004588 536 MESFKDKSLSNGLFFLELLSSVEPRV-VNWNLVTKGESDEEKRLNATYIISVA--RKLGCS--IFLLPEDIMEV 604 (743)
Q Consensus 536 i~nfsd~s~~dG~a~~aLl~~~~P~~-i~~~~l~~~~~~~~~~~n~~~a~~~A--~~lGi~--~ll~peDi~~~ 604 (743)
|+.+. .-||-|..||.|.+++.|+. +..+.... ++..+...+-|-|-.| .+||+| .+.+..|+...
T Consensus 3 Vt~LW-~~fr~G~PLc~lfNal~p~~~L~v~~~~~--~~~k~~K~ai~~Fi~ack~~L~~~~~e~FtIsdl~~~ 73 (89)
T PF06395_consen 3 VTQLW-KLFRQGYPLCVLFNALQPEEPLPVDPVSS--DDLKVCKKAIYKFIQACKQELGFPDEELFTISDLYGD 73 (89)
T ss_pred HHHHH-HHHhCcCcHHHHHHccCCccCCCCCCCCc--chHHHHHHHHHHHHHHHHHhcCCCccceeeeeccccC
Confidence 33444 56889999999999999973 44322221 2222222333444445 479998 45777777643
No 148
>cd08540 SAM_PNT-ERG Sterile alpha motif (SAM)/Pointed domain of ERG transcription factor. SAM Pointed domain of ERG subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It may participate in formation of homodimers or heterodimers with ETS-2, Fli-1, ER81, and Pu-1. However, dimeric forms are inactive and SAM Pointed domain is not essential for dimerization, since ER81 and Pu-1 do not have it. In mouse, a regulator of this type binds the ESET histone H3-specific methyltransferase (human homolog is SETDB1), followed by modification of local chromatin structure through histone methylation. ERG regulators are involved in endothelial cell differentiation, bone morphogenesis and neural crest development. The Erg gene is a proto-oncogene. It is a target of chromosomal translocations resulting in fusions with new neighboring genes. Chimeric proteins were found in solid tumors such as myeloid leukemia or Ewing's sarcoma. Members of this subfamily are po
Probab=36.63 E-value=35 Score=28.90 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=26.1
Q ss_pred ChhHHHHHHhHHhhccCCccccccCCCCCC--CChHHHHHHh
Q 004588 515 TDAGILKWANDKVKSTGRTSQMESFKDKSL--SNGLFFLELL 554 (743)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~~~~i~nfsd~s~--~dG~a~~aLl 554 (743)
+++....|++-.++.|+ +.-.+++ .| -||+++|+|=
T Consensus 9 t~~~V~~WL~Wa~~ef~--L~~~~~~--~F~~m~Gk~LC~Ls 46 (75)
T cd08540 9 STDHVRQWLEWAVKEYG--LPDVDVL--LFQNIDGKELCKMT 46 (75)
T ss_pred CHHHHHHHHHHHHHHhC--CCCCCcc--cccCCCHHHHHhCC
Confidence 56788888888888886 3334453 56 3999999963
No 149
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed
Probab=36.49 E-value=2.1e+02 Score=35.82 Aligned_cols=12 Identities=17% Similarity=0.138 Sum_probs=5.3
Q ss_pred HHHHHHHHhhcC
Q 004588 612 LTASIMYWSLQQ 623 (743)
Q Consensus 612 yls~~~~~~~~~ 623 (743)
|+..+|..|+.-
T Consensus 10 lV~e~y~~y~~d 21 (1228)
T PRK12270 10 LVEEMYQQYLAD 21 (1228)
T ss_pred HHHHHHHHHhcC
Confidence 344444444443
No 150
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=35.18 E-value=95 Score=36.32 Aligned_cols=80 Identities=15% Similarity=0.206 Sum_probs=58.6
Q ss_pred hcCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCC-----CCCccCHHHHHHHHH
Q 004588 16 SQFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAG-----AGDEIDFEAFLRAYI 89 (743)
Q Consensus 16 ~~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d-----~dg~I~feeFl~~~~ 89 (743)
.+++..-..-|.++|.+-| |++|.++-.||-..=++ .++.++.-.++..+...++.. .++.+...-||-+..
T Consensus 187 qelkp~~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~--CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~ 264 (625)
T KOG1707|consen 187 QELKPRCVKALKRIFKISDSDNDGALSDAELNDFQKK--CFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNT 264 (625)
T ss_pred ccccHHHHHHHHHHHhhhccccccccchhhhhHHHHH--hcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHH
Confidence 4667777888999999999 99999999999988775 789888877776655544332 233566677887776
Q ss_pred hhhcCCCC
Q 004588 90 NLQGRATT 97 (743)
Q Consensus 90 ~~~~~~~~ 97 (743)
-...++..
T Consensus 265 lfiergr~ 272 (625)
T KOG1707|consen 265 LFIERGRH 272 (625)
T ss_pred HHHHhccc
Confidence 55554433
No 151
>PF06395 CDC24: CDC24 Calponin; InterPro: IPR010481 This is a calponin homology domain.
Probab=33.74 E-value=93 Score=27.30 Aligned_cols=61 Identities=16% Similarity=0.267 Sum_probs=36.7
Q ss_pred CCCcchHHHHHHHHhhCCCC-CCCCCCCCCCHHHHHHH-HHH----hhhhcCCcc--ccCcccccccCcc
Q 004588 295 SDLKDGKAYTYLLNVLAPEH-CNPATLDMKDPTERAKL-VLD----HAERMDCKR--YLSPKDIVEGSAN 356 (743)
Q Consensus 295 sd~~DG~al~~Ll~~~~P~~-~~~~~l~~~~~~~n~~~-a~~----~ae~lgi~~--~l~peDi~~~~~d 356 (743)
.-|+-|..||+|.+++.|+. ++.+... .+...+.+. ++. .-.+||+|. ..+..|+...+..
T Consensus 8 ~~fr~G~PLc~lfNal~p~~~L~v~~~~-~~~~k~~K~ai~~Fi~ack~~L~~~~~e~FtIsdl~~~dT~ 76 (89)
T PF06395_consen 8 KLFRQGYPLCVLFNALQPEEPLPVDPVS-SDDLKVCKKAIYKFIQACKQELGFPDEELFTISDLYGDDTN 76 (89)
T ss_pred HHHhCcCcHHHHHHccCCccCCCCCCCC-cchHHHHHHHHHHHHHHHHHhcCCCccceeeeeccccCCCc
Confidence 44678889999999999974 4432222 222233332 222 223488885 6777787766543
No 152
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=33.43 E-value=1.4e+02 Score=29.60 Aligned_cols=34 Identities=12% Similarity=0.109 Sum_probs=27.0
Q ss_pred HHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCC
Q 004588 23 LRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMF 59 (743)
Q Consensus 23 ~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~ 59 (743)
...|++.-.-|| |+||.|..-|--..++ ++|..+
T Consensus 6 ~T~LQqHvaFFDrd~DGiI~P~dTy~GFr---aLGf~~ 40 (174)
T PF05042_consen 6 MTVLQQHVAFFDRDKDGIIYPWDTYQGFR---ALGFGI 40 (174)
T ss_pred ccHHhhhhceeCCCCCeeECHHHHHHHHH---HhCCCH
Confidence 345778888899 9999999999888888 455543
No 153
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=33.32 E-value=45 Score=38.88 Aligned_cols=70 Identities=13% Similarity=0.165 Sum_probs=51.0
Q ss_pred cchHhhhcCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCC-c---HHHHHHHHHHHcCCCCCccCHHHH
Q 004588 10 SDQWLQSQFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMF-T---EEDIKGILAESYAGAGDEIDFEAF 84 (743)
Q Consensus 10 s~~~l~~~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~-t---~~ei~~~i~e~d~d~dg~I~feeF 84 (743)
.+|--.-.++..-++-+...|..|| |+||-++..||..++. ..+... + +.+.-. .+..|.+.|.-|
T Consensus 301 ~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~---~~P~~pW~~~~~~~~t~------~~~~G~ltl~g~ 371 (625)
T KOG1707|consen 301 VPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFS---TAPGSPWTSSPYKDSTV------KNERGWLTLNGF 371 (625)
T ss_pred CCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhh---hCCCCCCCCCcccccce------ecccceeehhhH
Confidence 3444455678888899999999999 9999999999999999 554432 1 111111 125788999988
Q ss_pred HHHH
Q 004588 85 LRAY 88 (743)
Q Consensus 85 l~~~ 88 (743)
+...
T Consensus 372 l~~W 375 (625)
T KOG1707|consen 372 LSQW 375 (625)
T ss_pred HHHH
Confidence 8755
No 154
>cd08541 SAM_PNT-FLI-1 Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator. SAM Pointed domain of FLI-1 (Friend Leukemia Integration) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. The FLI-1 protein participates in regulation of cellular differentiation, proliferation, and survival. The Fli-1 gene was initially described in Friend virus-induced erythroleukemias as a site for virus integration. It is highly expressed in hematopoietic tissues and at lower level in lungs, heart, and ovaries. Fli-1 is a proto-oncogene implicated in Ewing's sarcoma and erythroleukemia. Members of this subfamily are potential targets for cancer therapy.
Probab=32.94 E-value=45 Score=29.38 Aligned_cols=36 Identities=14% Similarity=0.171 Sum_probs=25.7
Q ss_pred ChhHHHHHHhHHhhccCCccccccCCCCCCC--ChHHHHHHh
Q 004588 515 TDAGILKWANDKVKSTGRTSQMESFKDKSLS--NGLFFLELL 554 (743)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~~~~i~nfsd~s~~--dG~a~~aLl 554 (743)
+++....|++-.++.|+ +.=-++ ..|. ||++||+|=
T Consensus 21 t~~hV~~WL~Wa~~ef~--L~~vd~--~~F~~m~Gk~LC~Ls 58 (91)
T cd08541 21 TQEHVRQWLEWAIKEYG--LMEIDT--SFFQNMDGKELCKMN 58 (91)
T ss_pred CHHHHHHHHHHHHHHcC--CCCCCh--hhccCCCHHHHHhCC
Confidence 56888899998888886 322233 2573 999999963
No 155
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=32.56 E-value=46 Score=29.31 Aligned_cols=28 Identities=14% Similarity=0.264 Sum_probs=24.3
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHHh
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMAK 51 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~k 51 (743)
..+.++|+.+| |+||.|+..|+-.++.+
T Consensus 48 ~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~ 76 (91)
T cd05024 48 MAVDKIMKDLDDCRDGKVGFQSFFSLIAG 76 (91)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 45777899999 99999999999988873
No 156
>PLN02952 phosphoinositide phospholipase C
Probab=31.65 E-value=1.4e+02 Score=35.56 Aligned_cols=64 Identities=13% Similarity=0.231 Sum_probs=39.8
Q ss_pred HHHHHHhHhhhCCCCeeeHHhHHHHHHhhhhcCCC-CcHHHHHHHHHHHcC-------CCCCccCHHHHHHHHH
Q 004588 24 RSLKSKFVSIKNQNGKVTVADLPPVMAKLKAFSTM-FTEEDIKGILAESYA-------GAGDEIDFEAFLRAYI 89 (743)
Q Consensus 24 ~~l~~~F~~~D~~~G~I~~~el~~~l~k~~~lg~~-~t~~ei~~~i~e~d~-------d~dg~I~feeFl~~~~ 89 (743)
.+++.+|..+-.+.+.++.++|...|+. .-|+. .+.+++.+++.++-. ...+.++++.|.+.+.
T Consensus 38 ~ei~~lf~~~~~~~~~mt~~~l~~FL~~--~Q~e~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~F~~~l~ 109 (599)
T PLN02952 38 DDVKDVFCKFSVGGGHMGADQLRRFLVL--HQDELDCTLAEAQRIVEEVINRRHHVTRYTRHGLNLDDFFHFLL 109 (599)
T ss_pred HHHHHHHHHHhCCCCccCHHHHHHHHHH--hCCCcCCCHHHHHHHHHHHHhhccccccccccCcCHHHHHHHHc
Confidence 3566666666533367888888888884 44543 666777777654411 1223577788877764
No 157
>TIGR02675 tape_meas_nterm tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.
Probab=30.18 E-value=1.2e+02 Score=25.56 Aligned_cols=60 Identities=15% Similarity=0.273 Sum_probs=36.1
Q ss_pred hcCCHHHHHHHHHHhHhhhCCCCeeeHHhHHHHHHhh--------hhcCCCCcHHHHHHHHHHHcCCCCCccCHHHH
Q 004588 16 SQFTQVELRSLKSKFVSIKNQNGKVTVADLPPVMAKL--------KAFSTMFTEEDIKGILAESYAGAGDEIDFEAF 84 (743)
Q Consensus 16 ~~~t~~e~~~l~~~F~~~D~~~G~I~~~el~~~l~k~--------~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeF 84 (743)
...+.++....-.+|... -..|++..+|+..++... +.+ ..+..++++++.+ |+|+.++|
T Consensus 8 ~G~s~e~~~~~~~ql~Q~-~~~Gkv~~ee~n~~~e~~p~~~~~lAk~~--G~t~~~l~~~~~~------Gkit~~~~ 75 (75)
T TIGR02675 8 SGASAEEADGALIQLSQM-LASGKLRGEEINSLLEALPGALQALAKAM--GVTRGELRKMLSD------GKLTADVI 75 (75)
T ss_pred hCCCHHHHHHHHHHHHHH-HHcCcccHHHHHHHHHHhHHHHHHHHHHh--CCCHHHHHHHHHC------CCCccccC
Confidence 345666666666555533 567999999999988632 122 2555566655543 55555443
No 158
>PLN02222 phosphoinositide phospholipase C 2
Probab=30.15 E-value=1.2e+02 Score=35.83 Aligned_cols=63 Identities=21% Similarity=0.327 Sum_probs=47.2
Q ss_pred HHHHHhHhhhCCCCeeeHHhHHHHHHhhhhcCC-CCcHHHHHHHHHHHcC-CCCCccCHHHHHHHHHh
Q 004588 25 SLKSKFVSIKNQNGKVTVADLPPVMAKLKAFST-MFTEEDIKGILAESYA-GAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 25 ~l~~~F~~~D~~~G~I~~~el~~~l~k~~~lg~-~~t~~ei~~~i~e~d~-d~dg~I~feeFl~~~~~ 90 (743)
+++.+|..+-+ ++.++.++|...|++ .-|+ ..+.+...++|..+.. -..+.++++.|.+++..
T Consensus 26 ei~~if~~~~~-~~~mt~~~l~~FL~~--~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s 90 (581)
T PLN02222 26 EIKTIFEKYSE-NGVMTVDHLHRFLID--VQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLFG 90 (581)
T ss_pred HHHHHHHHhcC-CCCcCHHHHHHHHHH--hcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcC
Confidence 56666766642 479999999999995 5565 3578888999987532 24567999999999854
No 159
>PF05086 Dicty_REP: Dictyostelium (Slime Mold) REP protein; InterPro: IPR007778 This family consists of REP proteins from a number of Dictyostelium species (Slime molds). REP protein is probably involved in transcription regulation and control of DNA replication, specifically the amplification of plasmid at low copy numbers. The formation of homomultimers may be required for their regulatory activity [].
Probab=29.32 E-value=97 Score=37.22 Aligned_cols=14 Identities=21% Similarity=0.418 Sum_probs=5.6
Q ss_pred CCCCCCCCCCCCCC
Q 004588 685 PSPANGYSSTTPDA 698 (743)
Q Consensus 685 ~~p~~~~~~~~~~~ 698 (743)
|.|+...+++.+.|
T Consensus 289 ~~~~~~~~~~~~~p 302 (911)
T PF05086_consen 289 PEPFKNNKKPDDDP 302 (911)
T ss_pred CCCcccCCCCCCCc
Confidence 44444444433333
No 160
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=29.30 E-value=44 Score=36.02 Aligned_cols=68 Identities=12% Similarity=0.112 Sum_probs=48.2
Q ss_pred HHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHh
Q 004588 21 VELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 21 ~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~ 90 (743)
+|.+.+.=.|..+| |.++.|...|.+.+=+-| +...-...=.+.|.+-.|.|+|..|+|.|++.-+..
T Consensus 330 DeeRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l--~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 330 DEERVVHWYFNQLDKNSNNDIERREWKPFKRVL--LKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred ChhheeeeeeeeecccccCccchhhcchHHHHH--HhhccHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 34455666799999 999999999966543310 011222344577889999999999999999876643
No 161
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=28.39 E-value=1.6e+02 Score=33.63 Aligned_cols=66 Identities=24% Similarity=0.262 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHH-HcCCCCCccCHHHHHHH
Q 004588 20 QVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAE-SYAGAGDEIDFEAFLRA 87 (743)
Q Consensus 20 ~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e-~d~d~dg~I~feeFl~~ 87 (743)
.+|++.+--.|...+ ++.-+.+.+|+-...-. -++++-..+++..++.. .|.-.||-|+|+||...
T Consensus 32 ~~eLr~if~~~as~e~~ge~~mt~edFv~~ylg--L~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~af 99 (694)
T KOG0751|consen 32 PKELRSIFLKYASIEKNGESYMTPEDFVRRYLG--LYNESNFNDKIVRLLASIADQTKDGLISFQEFRAF 99 (694)
T ss_pred hHHHHHHHHHHhHHhhccccccCHHHHHHHHHh--hcccccCChHHHHHHHhhhhhcccccccHHHHHHH
Confidence 344444444445556 66677899987765442 34565555666666654 57779999999999754
No 162
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=28.03 E-value=34 Score=42.32 Aligned_cols=72 Identities=7% Similarity=0.153 Sum_probs=60.9
Q ss_pred cCCHHHHHHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhc
Q 004588 17 QFTQVELRSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQG 93 (743)
Q Consensus 17 ~~t~~e~~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~ 93 (743)
..+..+...+.++|...| +.+|+|+..+....|. . ..+....+..+....|.++.|.+++++|.-.|..+..
T Consensus 276 ~vsp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~---~--~gl~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~~~~ 348 (847)
T KOG0998|consen 276 KVSPSDKQKYSKIFSQVDKDNDGSISSNEARNIFL---P--FGLSKPRLAHVWLLADTQNTGTLSKDEFALAMHLLEQ 348 (847)
T ss_pred ccChHHHHHHHHHHHhccccCCCcccccccccccc---c--CCCChhhhhhhhhhcchhccCcccccccchhhhhhhh
Confidence 356677788999999999 9999999999999998 4 4477788999999999999999999999877655433
No 163
>PF07499 RuvA_C: RuvA, C-terminal domain; InterPro: IPR011114 In prokaryotes, RuvA, RuvB, and RuvC process the universal DNA intermediate of homologous recombination, termed Holliday junction. The tetrameric DNA helicase RuvA specifically binds to the Holliday junction and facilitates the isomerization of the junction from the stacked folded configuration to the square-planar structure []. In the RuvA tetramer, each subunit consists of three domains, I, II and III, where I and II form the major core that is responsible for Holliday junction binding and base pair rearrangements of Holliday junction executed at the crossover point, whereas domain III regulates branch migration through direct contact with RuvB. The domain represents the C-terminal domain III of RuvA. This domain plays a significant role in the ATP-dependent branch migration of the hetero-duplex through direct contact with RuvB []. Within the Holliday junction, this domain makes no interaction with the DNA.; GO: 0005524 ATP binding, 0009378 four-way junction helicase activity, 0006281 DNA repair, 0006310 DNA recombination, 0009379 Holliday junction helicase complex; PDB: 1HJP_A 1CUK_A 1C7Y_A 1IXS_A 1IXR_B 1BVS_E 2ZTC_A 2ZTD_B 2H5X_A.
Probab=27.90 E-value=1.2e+02 Score=22.88 Aligned_cols=41 Identities=7% Similarity=0.283 Sum_probs=29.2
Q ss_pred HhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHh
Q 004588 43 ADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 43 ~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~ 90 (743)
+|...+|. ++| +++.|+...++++.. ...++.++.++...+
T Consensus 4 ~d~~~AL~---~LG--y~~~e~~~av~~~~~--~~~~~~e~~ik~aLk 44 (47)
T PF07499_consen 4 EDALEALI---SLG--YSKAEAQKAVSKLLE--KPGMDVEELIKQALK 44 (47)
T ss_dssp HHHHHHHH---HTT--S-HHHHHHHHHHHHH--STTS-HHHHHHHHHC
T ss_pred HHHHHHHH---HcC--CCHHHHHHHHHHhhc--CCCCCHHHHHHHHHh
Confidence 56667777 677 788999999999875 456778888876543
No 164
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=27.87 E-value=1.5e+02 Score=32.09 Aligned_cols=88 Identities=10% Similarity=0.034 Sum_probs=63.2
Q ss_pred HHHHHHhHhhh-CCCCeeeHHhHHHHHHhhhhc-CCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHhhhc--------
Q 004588 24 RSLKSKFVSIK-NQNGKVTVADLPPVMAKLKAF-STMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQG-------- 93 (743)
Q Consensus 24 ~~l~~~F~~~D-~~~G~I~~~el~~~l~k~~~l-g~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~~~~-------- 93 (743)
+.+...|..|| +++|.++..|--..+. -+ |-..|.+-|+--++.++.+.||.+.=++|--+++-.-.
T Consensus 259 d~l~~~f~LFde~~tg~~D~re~v~~la---vlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv~~l~v~~ 335 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRETVKTLA---VLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVLGVEVLRVPV 335 (412)
T ss_pred hhhhhhhheecCCCCCcccHHHHhhhhe---eeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhcCcceeeccc
Confidence 56888999999 9999999888766665 33 66788888888899999999999987777655542211
Q ss_pred --CCCCCCCCCCcchHHHHhhhc
Q 004588 94 --RATTKPGSAKNSSSFLKASTT 114 (743)
Q Consensus 94 --~~~~~~g~~~~s~~~lk~~~~ 114 (743)
+..+....+|++.+..+.-+.
T Consensus 336 lf~~i~q~d~~ki~~~~f~~fa~ 358 (412)
T KOG4666|consen 336 LFPSIEQKDDPKIYASNFRKFAA 358 (412)
T ss_pred cchhhhcccCcceeHHHHHHHHH
Confidence 112233457777776666554
No 165
>KOG3449 consensus 60S acidic ribosomal protein P2 [Translation, ribosomal structure and biogenesis]
Probab=27.51 E-value=2.2e+02 Score=25.96 Aligned_cols=53 Identities=15% Similarity=0.305 Sum_probs=44.5
Q ss_pred HHHHhHhhh-CCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHH
Q 004588 26 LKSKFVSIK-NQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLR 86 (743)
Q Consensus 26 l~~~F~~~D-~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~ 86 (743)
+..+|-.++ -++-.-+..|++.+|. +.|....++.++.+|.++. |+ +.+|.+.
T Consensus 3 yvaAYLL~~lgGn~~psa~DikkIl~---sVG~E~d~e~i~~visel~----GK-~i~ElIA 56 (112)
T KOG3449|consen 3 YVAAYLLAVLGGNASPSASDIKKILE---SVGAEIDDERINLVLSELK----GK-DIEELIA 56 (112)
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHH---HhCcccCHHHHHHHHHHhc----CC-CHHHHHH
Confidence 456777888 8888999999999999 8999999999999999984 33 6777654
No 166
>PF14658 EF-hand_9: EF-hand domain
Probab=27.28 E-value=83 Score=25.99 Aligned_cols=27 Identities=15% Similarity=0.302 Sum_probs=23.2
Q ss_pred HHHHHhHhhh-CCC-CeeeHHhHHHHHHh
Q 004588 25 SLKSKFVSIK-NQN-GKVTVADLPPVMAK 51 (743)
Q Consensus 25 ~l~~~F~~~D-~~~-G~I~~~el~~~l~k 51 (743)
+|......+| ++. |.|+.+++..+|++
T Consensus 36 ~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 36 ELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred HHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 6777778899 877 99999999999983
No 167
>PLN02228 Phosphoinositide phospholipase C
Probab=26.51 E-value=1.8e+02 Score=34.29 Aligned_cols=64 Identities=17% Similarity=0.236 Sum_probs=46.3
Q ss_pred HHHHHHhHhhhCCCCeeeHHhHHHHHHhhhhcCCC-CcHHHHHHHHHHHcCC----CCCccCHHHHHHHHHh
Q 004588 24 RSLKSKFVSIKNQNGKVTVADLPPVMAKLKAFSTM-FTEEDIKGILAESYAG----AGDEIDFEAFLRAYIN 90 (743)
Q Consensus 24 ~~l~~~F~~~D~~~G~I~~~el~~~l~k~~~lg~~-~t~~ei~~~i~e~d~d----~dg~I~feeFl~~~~~ 90 (743)
.++..+|..+- +++.++.++|...|+. .-|+. .+.+.+.+++..+... ..|.++++.|..++..
T Consensus 24 ~ei~~if~~~s-~~~~~t~~~~~~FL~~--~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s 92 (567)
T PLN02228 24 VSIKRLFEAYS-RNGKMSFDELLRFVSE--VQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFS 92 (567)
T ss_pred HHHHHHHHHhc-CCCccCHHHHHHHHHH--hcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcC
Confidence 34556666553 3468999999999995 44554 5567788999887653 3367999999998854
No 168
>PF00046 Homeobox: Homeobox domain not present here.; InterPro: IPR001356 The homeobox domain was first identified in a number of drosophila homeotic and segmentation proteins, but is now known to be well-conserved in many other animals, including vertebrates [, , ]. Hox genes encode homeodomain-containing transcriptional regulators that operate differential genetic programs along the anterior-posterior axis of animal bodies []. The domain binds DNA through a helix-turn-helix (HTH) structure. The HTH motif is characterised by two alpha-helices, which make intimate contacts with the DNA and are joined by a short turn. The second helix binds to DNA via a number of hydrogen bonds and hydrophobic interactions, which occur between specific side chains and the exposed bases and thymine methyl groups within the major groove of the DNA []. The first helix helps to stabilise the structure. The motif is very similar in sequence and structure in a wide range of DNA-binding proteins (e.g., cro and repressor proteins, homeotic proteins, etc.). One of the principal differences between HTH motifs in these different proteins arises from the stereo-chemical requirement for glycine in the turn which is needed to avoid steric interference of the beta-carbon with the main chain: for cro and repressor proteins the glycine appears to be mandatory, while for many of the homeotic and other DNA-binding proteins the requirement is relaxed.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2DA3_A 1LFB_A 2LFB_A 2ECB_A 2DA5_A 3D1N_O 3A03_A 2XSD_C 3CMY_A 1AHD_P ....
Probab=24.28 E-value=2.3e+02 Score=21.72 Aligned_cols=46 Identities=20% Similarity=0.336 Sum_probs=36.7
Q ss_pred hcCCHHHHHHHHHHhHhhhCCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHH
Q 004588 16 SQFTQVELRSLKSKFVSIKNQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAE 70 (743)
Q Consensus 16 ~~~t~~e~~~l~~~F~~~D~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e 70 (743)
..||.+++..|.+.|.. +.+.+.++...+-. .+| ++...|..++..
T Consensus 5 ~~~t~~q~~~L~~~f~~----~~~p~~~~~~~la~---~l~--l~~~~V~~WF~n 50 (57)
T PF00046_consen 5 TRFTKEQLKVLEEYFQE----NPYPSKEEREELAK---ELG--LTERQVKNWFQN 50 (57)
T ss_dssp SSSSHHHHHHHHHHHHH----SSSCHHHHHHHHHH---HHT--SSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH----hccccccccccccc---ccc--ccccccccCHHH
Confidence 35889999999999984 68899998888877 465 778888887653
No 169
>PF07462 MSP1_C: Merozoite surface protein 1 (MSP1) C-terminus; InterPro: IPR010901 This entry represents the C-terminal region of merozoite surface protein 1 (MSP1), which is found in a number of Plasmodium species. MSP-1 is a 200 kDa protein expressed on the surface of the Plasmodium vivax merozoite. MSP-1 of Plasmodium species is synthesised as a high-molecular-weight precursor and then processed into several fragments. At the time of red cell invasion by the merozoite, only the 19 kDa C-terminal fragment (MSP-119), which contains two epidermal growth factor-like domains, remains on the surface. Antibodies against MSP-119 inhibit merozoite entry into red cells, and immunisation with MSP-119 protects monkeys from challenging infections. Hence, MSP-119 is considered a promising vaccine candidate [].; GO: 0009405 pathogenesis, 0016020 membrane
Probab=23.84 E-value=1.5e+02 Score=34.25 Aligned_cols=29 Identities=17% Similarity=0.227 Sum_probs=15.1
Q ss_pred hHHHHHHhHHhhccCC-ccccccCCCCCCC
Q 004588 517 AGILKWANDKVKSTGR-TSQMESFKDKSLS 545 (743)
Q Consensus 517 ~~LL~W~~~~~~~~~~-~~~i~nfsd~s~~ 545 (743)
+.||+.-...++=|.. .++...+|+.|..
T Consensus 151 ~iLlkyYKa~~Kyy~gE~~PLKTlSe~Slq 180 (574)
T PF07462_consen 151 EILLKYYKARAKYYIGEPFPLKTLSEESLQ 180 (574)
T ss_pred HHHHHHHHHHHHHhcCCCcccccccHHHHh
Confidence 5677777666554421 2444445444443
No 170
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=23.50 E-value=1.5e+02 Score=34.55 Aligned_cols=58 Identities=14% Similarity=0.126 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhhcCC--ccccCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCccccCCC
Q 004588 608 MILTLTASIMYWSLQQQ--VEEAESSPLPSPTNGHSTTSPDAS-PVPSPANGRSTTTRDAS 665 (743)
Q Consensus 608 ~iltyls~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 665 (743)
.++||..++..+...-. ...-.-++-..|.+.|+..+++-. ..++..|+.++.+.+.+
T Consensus 331 G~LtYh~sL~dYM~niHgKEiDL~~tTikvpGK~pplatsa~ap~Ss~~~NGl~Kdm~~~r 391 (749)
T KOG0705|consen 331 GVLTYHPSLGDYMKNIHGKEIDLLRTTIKVPGKRPPLATSACAPSSSSKSNGLSKDMEPRR 391 (749)
T ss_pred cceeecccHHHHHHhcccceeeeeeeeeeccCccCcccccccccccccccccccccccccc
Confidence 35788888854444422 212223333456667777774444 44455788777776544
No 171
>cd00086 homeodomain Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Probab=23.35 E-value=2.5e+02 Score=21.41 Aligned_cols=46 Identities=20% Similarity=0.298 Sum_probs=37.7
Q ss_pred hcCCHHHHHHHHHHhHhhhCCCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHH
Q 004588 16 SQFTQVELRSLKSKFVSIKNQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAE 70 (743)
Q Consensus 16 ~~~t~~e~~~l~~~F~~~D~~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e 70 (743)
..++..++..|...|.. +.+.+.+++..+.. .+| ++..+|..++..
T Consensus 5 ~~~~~~~~~~Le~~f~~----~~~P~~~~~~~la~---~~~--l~~~qV~~WF~n 50 (59)
T cd00086 5 TRFTPEQLEELEKEFEK----NPYPSREEREELAK---ELG--LTERQVKIWFQN 50 (59)
T ss_pred CcCCHHHHHHHHHHHHh----CCCCCHHHHHHHHH---HHC--cCHHHHHHHHHH
Confidence 35788999999999985 67999999999888 465 788899888764
No 172
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=23.27 E-value=91 Score=27.45 Aligned_cols=54 Identities=17% Similarity=0.133 Sum_probs=37.2
Q ss_pred CCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHh
Q 004588 36 QNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYIN 90 (743)
Q Consensus 36 ~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d~d~dg~I~feeFl~~~~~ 90 (743)
-||.++..|...+-.-+... ..+++++...+++.+....+...++.+|.+.+..
T Consensus 12 aDG~v~~~E~~~i~~~l~~~-~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 65 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAER-FGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKE 65 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 47888888866654411111 2467788888888887766677889999887654
No 173
>PHA03247 large tegument protein UL36; Provisional
Probab=23.26 E-value=6.1e+02 Score=35.44 Aligned_cols=29 Identities=17% Similarity=0.083 Sum_probs=15.1
Q ss_pred cccCcchhccCCchHHHHHHHHHHHHhhc
Q 004588 594 IFLLPEDIMEVNQKMILTLTASIMYWSLQ 622 (743)
Q Consensus 594 ~ll~peDi~~~d~k~iltyls~~~~~~~~ 622 (743)
.++..+++.++-.--+++++.-+-.++..
T Consensus 2518 ~~~~~~~~~~~~~p~~~~w~~glEe~asd 2546 (3151)
T PHA03247 2518 AILPDEPVGEPVHPRMLTWIRGLEELASD 2546 (3151)
T ss_pred CCCCCCCCCCCCCchhhhhhhhhhhhhhc
Confidence 34555555554222345776666555554
No 174
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=22.87 E-value=1.2e+02 Score=24.89 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=29.8
Q ss_pred CCCeeeHHhHHHHHHhhhhcCCCCcHHHHHHHHHHHc
Q 004588 36 QNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESY 72 (743)
Q Consensus 36 ~~G~I~~~el~~~l~k~~~lg~~~t~~ei~~~i~e~d 72 (743)
.+=-|+.+-++..+. .+|..+++.+++++++.+.
T Consensus 28 ~NPpine~mir~M~~---QMG~kpSekqi~Q~m~~mk 61 (64)
T PF03672_consen 28 ENPPINEKMIRAMMM---QMGRKPSEKQIKQMMRSMK 61 (64)
T ss_pred HCCCCCHHHHHHHHH---HhCCCccHHHHHHHHHHHH
Confidence 456899999999999 7999999999999998763
No 175
>cd08536 SAM_PNT-Mae Sterile alpha motif (SAM)/Pointed domain of Mae protein homolog. Mae (Modulator of the Activity of ETS) subfamily represents a group of SAM Pointed monodomain proteins. SAM Pointed domain is a protein-protein interaction domain. It can interact with other SAM pointed domains forming head-to-tail heterodimers and also provides a kinase docking site. For example, in Drosophila Mae is required for facilitating phosphorylation of the Yan factor and for blocking phosphorylation of the ETS-2 regulator. Mae interacts with the SAM Pointed domains of Yan and ETS-2. Binding enhances access of the kinase to the Yan phosphorylation site by providing a kinase docking site, or inhibits phosphorylation of ETS-2 by blocking its docking site. This type of factors participates in regulation of kinase signaling particularly during embryogenesis.
Probab=20.77 E-value=1.1e+02 Score=25.27 Aligned_cols=35 Identities=11% Similarity=0.127 Sum_probs=25.5
Q ss_pred ChhHHHHHHhHHhhccCC-ccccccCCCCCCCChHHHHHH
Q 004588 515 TDAGILKWANDKVKSTGR-TSQMESFKDKSLSNGLFFLEL 553 (743)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~-~~~i~nfsd~s~~dG~a~~aL 553 (743)
+.+....|++..++.|+- .+.+.+|. -||+++|.|
T Consensus 6 s~~~V~~WL~w~~~ef~L~~~~~~~F~----m~Gk~LC~l 41 (66)
T cd08536 6 SREHVRTWLRWVSARYQLEVVDLDKFL----MNGKGLCLM 41 (66)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCccccC----CCHHHHHcC
Confidence 457788899888888863 33445553 499999986
No 176
>PLN02223 phosphoinositide phospholipase C
Probab=20.34 E-value=2.5e+02 Score=32.87 Aligned_cols=65 Identities=9% Similarity=-0.057 Sum_probs=48.8
Q ss_pred HHHHHHhHhhhCCCCeeeHHhHHHHH---HhhhhcCC-CCcHHHHHHHHHHHcCCC--------CCccCHHHHHHHHHh
Q 004588 24 RSLKSKFVSIKNQNGKVTVADLPPVM---AKLKAFST-MFTEEDIKGILAESYAGA--------GDEIDFEAFLRAYIN 90 (743)
Q Consensus 24 ~~l~~~F~~~D~~~G~I~~~el~~~l---~k~~~lg~-~~t~~ei~~~i~e~d~d~--------dg~I~feeFl~~~~~ 90 (743)
++++++|..+-.++|..+.+.|...+ .. .-|+ ..+.++.+.++.++-... .+.++++.|.+++..
T Consensus 16 ~~v~~~f~~~~~~~~~m~~~~l~~fl~~l~~--~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l~~~~f~~~L~s 92 (537)
T PLN02223 16 DLILNFFGNEFHGYDDDMPELLPRFIELLDT--EKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCLELDHLNEFLFS 92 (537)
T ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH--hcccccCCHHHHHHHHHHHHhhcccchhhhhccccCHHHHHHHhcC
Confidence 56788898876667999999999998 43 3454 578888888888764332 256899999988754
No 177
>cd08537 SAM_PNT-ESE-1-like Sterile alpha motif (SAM)/Pointed domain of ESE-1 like ETS transcriptional regulators. SAM Pointed domain of ESE-1-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. SAM Pointed domain of ESE-1 provides a potential docking site for signaling kinase Pak1 in humans. ESE-1 factors are involved in regulation of gene expression in different types of epithelial cells. ESE-1 is expressed in many different organs including intestine, stomach, pancreas, lungs, kidneys, and prostate. The DNA binding consensus motif for ESE-1 consists of a purine-rich GGA[AT] core sequence. The expression profile of these factors is altered in epithelial cancers if compared to normal tissues. Members of this subfamily are potential targets for cancer therapy.
Probab=20.26 E-value=79 Score=26.97 Aligned_cols=38 Identities=16% Similarity=0.289 Sum_probs=25.5
Q ss_pred ChhHHHHHHhHHhhccCCccccccCCCCCCCChHHHHHH
Q 004588 515 TDAGILKWANDKVKSTGRTSQMESFKDKSLSNGLFFLEL 553 (743)
Q Consensus 515 ~~~~LL~W~~~~~~~~~~~~~i~nfsd~s~~dG~a~~aL 553 (743)
++...+.|++..+..+..+..-.+|. .---||.+||.+
T Consensus 14 tk~qVleWL~~~~e~n~~dl~~v~f~-~F~MnG~~LC~l 51 (78)
T cd08537 14 TKTQVLEWISYHVEKNKYDASSIDFS-RCDMDGATLCNC 51 (78)
T ss_pred cHHHHHHHHHHHHHhccCCcccCCHH-HhCCchHHHHcc
Confidence 67899999999995522123333443 444689999985
Done!