Citrus Sinensis ID: 004588

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740---
MSSYVGVLVSDQWLQSQFTQVELRSLKSKFVSIKNQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQGRATTKPGSAKNSSSFLKASTTTLLHTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLILGLISQIIKIQLLADLNLKKTPQLVELVEDNSDVEELMGLAPEKVLLKWMNYHLKKAGYEKPVTNFSSDLKDGKAYTYLLNVLAPEHCNPATLDMKDPTERAKLVLDHAERMDCKRYLSPKDIVEGSANLNLAFVAQVFHQRSGLTTDSKKISFAEMITDDVQTSREERCFRLWINSLGIATYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQASKPPIKMPFRKVENCNQVIKIGKQLKFSLVNVAGNDFVQGNKKLILAFLWQLMRFNMLQLLKNLRSRSQGKEITDAGILKWANDKVKSTGRTSQMESFKDKSLSNGLFFLELLSSVEPRVVNWNLVTKGESDEEKRLNATYIISVARKLGCSIFLLPEDIMEVNQKMILTLTASIMYWSLQQQVEEAESSPLPSPTNGHSTTSPDASPVPSPANGRSTTTRDASPIPSPANGYRTTTPDASLAPSPANGYSSTTPDASPAPSVSGEDEISSLSGDVSNLTIDDAASDTTMSSQVENADTPVV
cccccccEEccHHHHHcccHHHHHHHHHHHHHcccccccECcccHHHHHHHHHHccccccHHHHHHHHHHccccccccEEHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHcccccHHHHHHcccHHHHHHHHHHHHHHHccccccEEccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccccEEccccccccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHcHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccc
***YVGVLVSDQWLQSQFTQVELRSLKSKFVSIKNQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQG*********************TLLHTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLILGLISQIIKIQLLADLNLKKTPQLVELVEDNSDVEELMGLAPEKVLLKWMNYHLKKAGYEKPVTNFSSDLKDGKAYTYLLNVLAPEHCNPATLDMKDPTERAKLVLDHAERMDCKRYLSPKDIVEGSANLNLAFVAQVFHQRSGLTTDSKKISFAEMITDDVQTSREERCFRLWINSLGIATYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQA***PIKMPFRKVENCNQVIKIGKQLKFSLVNVAGNDFVQGNKKLILAFLWQLMRFNMLQLLKNLRS*****EITDAGILKWANDKVKSTGRTSQMESFKDKSLSNGLFFLELLSSVEPRVVNWNLVTKGESDEEKRLNATYIISVARKLGCSIFLLPEDIMEVNQKMILTLTASIMYWSLQ**********************************************************************************************VSNLTIDDAASD***************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSSYVGVLVSDQWLQSQFTQVELRSLKSKFVSIKNQNGKVTVADLPPVMAKLKAFSTMFTEEDIKGILAESYAGAGDEIDFEAFLRAYINLQGRATTKPGSAKNSSSFLKASTTTLLHTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLILGLISQIIKIQLLADLNLKKTPQLVELVEDNSDVEELMGLAPEKVLLKWMNYHLKKAGYEKPVTNFSSDLKDGKAYTYLLNVLAPEHCNPATLDMKDPTERAKLVLDHAERMDCKRYLSPKDIVEGSANLNLAFVAQVFHQRSGLTTDSKKISFAEMITDDVQTSREERCFRLWINSLGIATYCNNVFEDVRNGWLLLEVLDKVSPGSVDWKQASKPPIKMPFRKVENCNQVIKIGKQLKFSLVNVAGNDFVQGNKKLILAFLWQLMRFNMLQLLKNLRSRSQGKEITDAGILKWANDKVKSTGRTSQMESFKDKSLSNGLFFLELLSSVEPRVVNWNLVTKGESDEEKRLNATYIISVARKLGCSIFLLPEDIMEVNQKMILTLTASIMYWSLQQQVEEAESSPLPSPTNGHSTTSPDASPVPSPANGRSTTTRDASPIPSPANGYRTTTPDASLAPSPANGYSSTTPDASPAPSVSGEDEISSLSGDVSNLTIDDAASDTTMSSQVENADTPVV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Fimbrin-like protein 2 Cross-links actin filaments (F-actin). Stabilizes and prevents F-actin depolymerization mediated by profilin. May regulate actin cytoarchitecture, cell cycle, cell division, cell elongation and cytoplasmic tractus.confidentQ9FKI0
Plastin-3 Actin-bundling protein.probableQ63598
Plastin-3 Actin-bundling protein found in intestinal microvilli, hair cell stereocilia, and fibroblast filopodia.probableP13797

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1PXY, chain A
Confidence level:very confident
Coverage over the Query: 123-247,265-373,388-623
View the alignment between query and template
View the model in PyMOL
Template: 3F7P, chain A
Confidence level:confident
Coverage over the Query: 386-617
View the alignment between query and template
View the model in PyMOL
Template: 1PXY, chain A
Confidence level:probable
Coverage over the Query: 123-247,265-373,388-623
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
3h0g, chain Aprobable Alignment | Template Structure
2ktg, chain Aprobable Alignment | Template Structure