BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004609
         (742 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224079239|ref|XP_002305805.1| predicted protein [Populus trichocarpa]
 gi|222848769|gb|EEE86316.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score = 1001 bits (2589), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 502/745 (67%), Positives = 604/745 (81%), Gaps = 14/745 (1%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
           MG ++ + A+IP GKS EESQKLL+QT+AALA+M+S PLD S IEDI  IL+SAVSG LL
Sbjct: 72  MGQSITRNAKIPIGKSKEESQKLLDQTAAALAVMESGPLDFSGIEDITRILDSAVSGTLL 131

Query: 61  SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
           +  E+CAVRRTLRA   V ++L ++    GD  +RY+PLLE+L+NC+F  ELE+K+GFCI
Sbjct: 132 TVGELCAVRRTLRAARAVLERLKDS----GDCSERYAPLLEILQNCSFQIELEKKVGFCI 187

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
           DC L  ILDRASEDLE+IR+ERKRNMENLD LLK ++A+IFQAGGIDKPL+TKRRSR+CV
Sbjct: 188 DCNLSKILDRASEDLEIIRSERKRNMENLDRLLKGISARIFQAGGIDKPLVTKRRSRLCV 247

Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
           G++ASH+YL+PDG+ LNVSSSG TYFMEP  AVE NN+EV LS+SE AEE AILSLLT+E
Sbjct: 248 GVRASHRYLIPDGVVLNVSSSGVTYFMEPGEAVELNNLEVMLSDSEKAEEIAILSLLTSE 307

Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS-------FDSSINIE 293
           IA+S R+IKY++D ++E+DL+FARA +A WM+GV PI +S+           +  SI+IE
Sbjct: 308 IAESARDIKYMLDGIIEVDLSFARAAYAYWMNGVRPIWTSEGCGGISSSGGDYLLSIDIE 367

Query: 294 GIKHPLLLGSSLRSLS--AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
           GI+HPLL G+S + LS    S++ N ++ D E+S +  G  SK +S+FPVPI+IKVEC T
Sbjct: 368 GIRHPLLNGTSRKRLSNILGSNSLNSMEVD-EDSMLDTGKPSKNVSEFPVPINIKVECGT 426

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
           RVVVI+GPNTGGKTASMKTLG+ASLMSKAGLYLPAKN P+LPWFD +LADIGDHQSLEQN
Sbjct: 427 RVVVISGPNTGGKTASMKTLGVASLMSKAGLYLPAKNTPKLPWFDFVLADIGDHQSLEQN 486

Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           LSTFSGHISRI  ILE+ S ESLVL+DEI SGTDPSEGVAL+TSIL YLRD V LAVVTT
Sbjct: 487 LSTFSGHISRICKILEVASNESLVLVDEICSGTDPSEGVALSTSILHYLRDHVNLAVVTT 546

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HYADLS LKDKD+RFENAA EFSLETL+PTY+ILWG TGDSNAL+IAKSIGFD  II+RA
Sbjct: 547 HYADLSLLKDKDSRFENAAMEFSLETLQPTYQILWGCTGDSNALSIAKSIGFDSNIIERA 606

Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
           +K VE+L PE+QQ R   LYQSL+EER +LE+QAR  ASLH EIM+LY EI+ E++DLD 
Sbjct: 607 RKWVEKLVPEKQQERSGMLYQSLLEERNRLEAQARKGASLHTEIMELYHEIQAESEDLDG 666

Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA 651
           R   L AKETQ VQ EL  A  QI+TVVQ+ E QLR AS D+ NSLIK+SESAIA+IVEA
Sbjct: 667 RVKALMAKETQLVQLELKAANSQIETVVQNVETQLRKASPDQFNSLIKKSESAIASIVEA 726

Query: 652 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
           H   D    SET+TSS+TPQ GEQV VK LG+KLATVVE P DD+TVLVQYGK+RVR+KK
Sbjct: 727 HCSSDSLPASETDTSSYTPQLGEQVLVKRLGNKLATVVEAPRDDETVLVQYGKIRVRMKK 786

Query: 712 NNIRPIPNSKRKNAANPAPRLRKQV 736
           ++IR I + K+  A    P L++QV
Sbjct: 787 SDIRAIKSDKKSKATILVPSLKRQV 811


>gi|255556027|ref|XP_002519048.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
 gi|223541711|gb|EEF43259.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
          Length = 873

 Score =  979 bits (2531), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/742 (65%), Positives = 589/742 (79%), Gaps = 43/742 (5%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
           MGH+  + A IP G+S++ES+ LL+QT+AALAMMQ   LD S IEDI GI+NSAVSG LL
Sbjct: 71  MGHSAARSASIPIGESIQESRMLLDQTTAALAMMQYGTLDFSAIEDITGIVNSAVSGNLL 130

Query: 61  SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
           + SE+CAVRRTL A   V ++L +     GD L+R  PLLE+ ++CN   +LE+KIGFCI
Sbjct: 131 TVSELCAVRRTLEAAKAVLERLKDG----GDCLERSYPLLEIFRSCNLQIQLEQKIGFCI 186

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
           DC LLIILDRASEDLELIR ERK+ MENLD+LLK ++ +IFQAGGID+P +TKRRSR+CV
Sbjct: 187 DCNLLIILDRASEDLELIRYERKKTMENLDNLLKGISTRIFQAGGIDRPFVTKRRSRLCV 246

Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
           G++A+H+YL+PDG+ L+VS SGATYF+EP  AVE NN+EV LSNSE AEE AILSLLT+E
Sbjct: 247 GVRATHRYLIPDGVILDVSGSGATYFVEPGDAVELNNLEVMLSNSERAEEIAILSLLTSE 306

Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ-------SHVSFDSSINIE 293
           IA+SER+IK L+D +LE+DLAFARA +A+ ++GVCP  +S+       S  ++  SI+IE
Sbjct: 307 IAESERDIKKLLDGILEVDLAFARAAYARQINGVCPTFTSEGYEGEPSSRANYALSIDIE 366

Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
           GI+HPLLLGSS +                                FPVPI+IKVEC TRV
Sbjct: 367 GIQHPLLLGSSQQK-------------------------------FPVPINIKVECGTRV 395

Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
           VVI+GPNTGGKTASMKTLG+ASLMSKAGL+LPA+N P++PWFD++LADIGD+QSLEQNLS
Sbjct: 396 VVISGPNTGGKTASMKTLGIASLMSKAGLFLPARNTPKIPWFDVVLADIGDNQSLEQNLS 455

Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
           TFSGHISRI  ILE+ S+ESLVLIDEI SGTDPSEGVAL+TSILQYLRDRV LAVVTTHY
Sbjct: 456 TFSGHISRICKILEVTSKESLVLIDEICSGTDPSEGVALSTSILQYLRDRVNLAVVTTHY 515

Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
           ADLS LKD D++FENAA EFSLETL+PTY+ILWGSTG+SNAL+IAKSIGFD  II+RA+K
Sbjct: 516 ADLSLLKDSDSQFENAAMEFSLETLQPTYQILWGSTGNSNALSIAKSIGFDSNIIERAEK 575

Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
            VE+L PE+QQHRK  LY+SLM+ER KLE+QAR AAS+HA+IM+LY EI+DEA +LD R 
Sbjct: 576 WVEKLIPEKQQHRKGLLYKSLMDERNKLEAQAREAASVHAQIMELYYEIQDEAGNLDSRI 635

Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
             L AKETQQVQQEL   K QI+TVV +FEN LR AS  + NSLI++SESAIA+IVEAH 
Sbjct: 636 MALMAKETQQVQQELKATKSQIETVVHNFENLLRKASPLQFNSLIRKSESAIASIVEAHY 695

Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
           P D+   SE + SS+TPQ GEQVH+K  G+K+ATVVE PG D+T+LVQYGK+RVRVKK++
Sbjct: 696 PADNLPASE-DVSSYTPQLGEQVHLKGFGNKVATVVEAPGKDETILVQYGKIRVRVKKSD 754

Query: 714 IRPIPNSKRKNAANPAPRLRKQ 735
           IR I   KR  A    PRL++Q
Sbjct: 755 IRAIQGKKRTEATKLVPRLKRQ 776


>gi|356521351|ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Glycine max]
          Length = 902

 Score =  952 bits (2462), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/743 (63%), Positives = 582/743 (78%), Gaps = 22/743 (2%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
           MG A    A++P G++  +SQ+LL+QTSAA   + ++PLD S + D+  IL  A SG LL
Sbjct: 61  MGSAAALNARLPIGRTRRDSQRLLDQTSAA--RLVAEPLDFSGVHDLTEILGVATSGHLL 118

Query: 61  SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
           +  E+C VR TL A   ++  L   A       QRY PLL++L+NCNF   LE KI FCI
Sbjct: 119 TIRELCTVRHTLAAARELFDALKRVASASNHP-QRYLPLLDILQNCNFQVGLERKIEFCI 177

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
           DCKL IILDRASEDLE+IR+ERKRN+E LDSLLK+V++QIFQAGGID+PLI KRRSRMCV
Sbjct: 178 DCKLSIILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCV 237

Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
           GI+ASH+YLLPDG+ LNVSSSGATYFMEPK A++ NN+EVRLS+SE AEE+ ILS+L +E
Sbjct: 238 GIRASHRYLLPDGVVLNVSSSGATYFMEPKDAIDLNNLEVRLSSSEKAEESVILSMLASE 297

Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS------------ 288
           IA SE +I +L+D++L++DLAFARA +AQWM+GVCPI S  +    DS            
Sbjct: 298 IANSESDINHLLDKILKVDLAFARAAYAQWMNGVCPIFSLGNFEGRDSVEDDDDTLVTQE 357

Query: 289 ----SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS--LSKGISDFPVP 342
               +++I GI+HPLLL SSL ++S   +  +   ++  N   T+ S  + +GISDFPVP
Sbjct: 358 DDDLTVDIVGIRHPLLLESSLENISDNLTLRSGNAAEFGNGNGTMASKYMPQGISDFPVP 417

Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
           +D K+   TRVVVI+GPNTGGKTASMKTLGLASLMSKAG++LPAK +P+LPWFDLILADI
Sbjct: 418 VDFKIGHGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKNPKLPWFDLILADI 477

Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
           GDHQSLEQNLSTFSGHISRI  ILE+ S +SLVLIDEIG GTDPSEGVAL+ SILQYL+D
Sbjct: 478 GDHQSLEQNLSTFSGHISRICKILEVASTQSLVLIDEIGGGTDPSEGVALSASILQYLKD 537

Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
           RV LAVVTTHYADLS +K+KDTRF+NAA EFSLETL+PTYRILWG TGDSNAL+IA+SIG
Sbjct: 538 RVNLAVVTTHYADLSSMKEKDTRFDNAAMEFSLETLQPTYRILWGCTGDSNALSIAQSIG 597

Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
           FDR II RAQK VE+ +PE+QQ R+  LYQSL EER +L++QA  AAS+HAEIM +Y EI
Sbjct: 598 FDRNIIDRAQKWVEKFKPEQQQERRGMLYQSLQEERNQLKAQAEKAASVHAEIMSVYNEI 657

Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
           + EA+DLD+R   L AKETQQVQ EL  AK QI+TV+Q FE QLR +  D++N LI+ESE
Sbjct: 658 QGEAEDLDQREMELMAKETQQVQHELEHAKSQIETVIQKFEKQLRISGRDQLNYLIRESE 717

Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
           SAIA+IV+AH P D F ++E + + +TPQ GEQVHVK LG KLATVVE PGDD T++VQY
Sbjct: 718 SAIASIVKAHTPADSFPINEADRALYTPQIGEQVHVKGLGGKLATVVESPGDDGTIMVQY 777

Query: 703 GKMRVRVKKNNIRPIPNSKRKNA 725
           GK++VRVKK+NI  IP+S RKNA
Sbjct: 778 GKVKVRVKKSNIIAIPSS-RKNA 799


>gi|356521349|ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Glycine max]
          Length = 914

 Score =  952 bits (2461), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/743 (63%), Positives = 583/743 (78%), Gaps = 22/743 (2%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
           MG A    A++P G++  +SQ+LL+QTSAA   + ++PLD S + D+  IL  A SG LL
Sbjct: 61  MGSAAALNARLPIGRTRRDSQRLLDQTSAA--RLVAEPLDFSGVHDLTEILGVATSGHLL 118

Query: 61  SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
           +  E+C VR TL A   ++  L   A    +  QRY PLL++L+NCNF   LE KI FCI
Sbjct: 119 TIRELCTVRHTLAAARELFDALKRVASA-SNHPQRYLPLLDILQNCNFQVGLERKIEFCI 177

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
           DCKL IILDRASEDLE+IR+ERKRN+E LDSLLK+V++QIFQAGGID+PLI KRRSRMCV
Sbjct: 178 DCKLSIILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCV 237

Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
           GI+ASH+YLLPDG+ LNVSSSGATYFMEPK A++ NN+EVRLS+SE AEE+ ILS+L +E
Sbjct: 238 GIRASHRYLLPDGVVLNVSSSGATYFMEPKDAIDLNNLEVRLSSSEKAEESVILSMLASE 297

Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS------------ 288
           IA SE +I +L+D++L++DLAFARA +AQWM+GVCPI S  +    DS            
Sbjct: 298 IANSESDINHLLDKILKVDLAFARAAYAQWMNGVCPIFSLGNFEGRDSVEDDDDTLVTQE 357

Query: 289 ----SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS--LSKGISDFPVP 342
               +++I GI+HPLLL SSL ++S   +  +   ++  N   T+ S  + +GISDFPVP
Sbjct: 358 DDDLTVDIVGIRHPLLLESSLENISDNLTLRSGNAAEFGNGNGTMASKYMPQGISDFPVP 417

Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
           +D K+   TRVVVI+GPNTGGKTASMKTLGLASLMSKAG++LPAK +P+LPWFDLILADI
Sbjct: 418 VDFKIGHGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKNPKLPWFDLILADI 477

Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
           GDHQSLEQNLSTFSGHISRI  ILE+ S +SLVLIDEIG GTDPSEGVAL+ SILQYL+D
Sbjct: 478 GDHQSLEQNLSTFSGHISRICKILEVASTQSLVLIDEIGGGTDPSEGVALSASILQYLKD 537

Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
           RV LAVVTTHYADLS +K+KDTRF+NAA EFSLETL+PTYRILWG TGDSNAL+IA+SIG
Sbjct: 538 RVNLAVVTTHYADLSSMKEKDTRFDNAAMEFSLETLQPTYRILWGCTGDSNALSIAQSIG 597

Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
           FDR II RAQK VE+ +PE+QQ R+  LYQSL EER +L++QA  AAS+HAEIM +Y EI
Sbjct: 598 FDRNIIDRAQKWVEKFKPEQQQERRGMLYQSLQEERNQLKAQAEKAASVHAEIMSVYNEI 657

Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
           + EA+DLD+R   L AKETQQVQ EL  AK QI+TV+Q FE QLR +  D++N LI+ESE
Sbjct: 658 QGEAEDLDQREMELMAKETQQVQHELEHAKSQIETVIQKFEKQLRISGRDQLNYLIRESE 717

Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
           SAIA+IV+AH P D F ++E + + +TPQ GEQVHVK LG KLATVVE PGDD T++VQY
Sbjct: 718 SAIASIVKAHTPADSFPINEADRALYTPQIGEQVHVKGLGGKLATVVESPGDDGTIMVQY 777

Query: 703 GKMRVRVKKNNIRPIPNSKRKNA 725
           GK++VRVKK+NI  IP+S RKNA
Sbjct: 778 GKVKVRVKKSNIIAIPSS-RKNA 799


>gi|358346679|ref|XP_003637393.1| MutS2 family protein [Medicago truncatula]
 gi|355503328|gb|AES84531.1| MutS2 family protein [Medicago truncatula]
          Length = 913

 Score =  947 bits (2449), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/755 (63%), Positives = 587/755 (77%), Gaps = 24/755 (3%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
           MG +    A++P G +   SQKLL+QTSAA  + Q Q LD S I D+  IL+ +VSG+LL
Sbjct: 59  MGSSAANNARLPVGLTPHHSQKLLDQTSAARLVPQQQ-LDFSGIHDLTDILSVSVSGKLL 117

Query: 61  SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
           +  E+C VRRTL +   ++  L   A +   S  RYSPLLE+L+NCNFL  LE +I FCI
Sbjct: 118 TVPELCTVRRTLSSARELFDTLRHLASVSNHS-HRYSPLLEILQNCNFLMGLERRIEFCI 176

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
           DC LL+ILDRASEDLE+IR+ERKRN+E LDSLLK+V++QIF+AGGID+P ITKRRSRMCV
Sbjct: 177 DCNLLVILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFRAGGIDRPFITKRRSRMCV 236

Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
           GI+AS++YLLP+GI LN SSSGATYFMEPK A++ NNMEVRLSNSE AEE AILS+L +E
Sbjct: 237 GIRASYRYLLPEGIVLNASSSGATYFMEPKEAIDLNNMEVRLSNSEAAEERAILSMLASE 296

Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----------SQSHVSF--- 286
           IA S+ EI YL+D++LE+DLAFARA +AQWM+GVCPI S             + +S    
Sbjct: 297 IANSKSEINYLLDKILEVDLAFARAAYAQWMNGVCPIFSLGTLEVCESVEKDNDISVVQD 356

Query: 287 -DSSINIEGIKHPLLLGSSLRSLS----AASSNSNPLKSDVENSEMTVGSLSKGISDFPV 341
            D ++NIEG++HPLLL SSL ++S      S N+  L +   N  M   S S+GI+DFPV
Sbjct: 357 DDLTVNIEGMRHPLLLESSLENISDNVTLRSGNAAELGNG--NGTMASKSASQGITDFPV 414

Query: 342 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 401
           P+D K+   TRVVVI+GPNTGGKTASMKTLGLASLMSKAG++LPAK  P+LPWFDLIL D
Sbjct: 415 PVDFKIRSGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKSPKLPWFDLILVD 474

Query: 402 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
           IGDHQSLEQNLSTFSGHISRI   LE+ S++SLVLIDEIGSGTDPSEGVAL+ SILQYLR
Sbjct: 475 IGDHQSLEQNLSTFSGHISRIRKFLEVASKQSLVLIDEIGSGTDPSEGVALSASILQYLR 534

Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
           + V LAVVTTHYADLS +K+KDT FENAA EFSLETL+PTYR+LWG TGDSNAL+IA+SI
Sbjct: 535 EHVNLAVVTTHYADLSTMKEKDTCFENAAMEFSLETLQPTYRVLWGCTGDSNALSIAQSI 594

Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
           GFD+ II  AQK VE+L+PE+QQ R+  LYQSL EE+ +L++QA  AAS+HAEIM++Y E
Sbjct: 595 GFDKNIIDHAQKWVEKLKPEQQQERRGMLYQSLQEEKNRLKAQAEKAASIHAEIMNVYSE 654

Query: 582 IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKES 641
           I+ EA+DLDRR   L AKE QQVQQEL  AK Q++ V+Q FE QL+D   +++NS+IKES
Sbjct: 655 IQGEAEDLDRRETMLMAKEAQQVQQELEDAKSQMEIVIQKFEKQLKDLGRNQLNSIIKES 714

Query: 642 ESAIAAIVEAHRPDDDFSVSETN-TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
           E+AIA+IV+AH P   F +++ + T+S+TPQFGEQV VK LG KLATVVE+ GDD+T+LV
Sbjct: 715 ETAIASIVKAHTPAVGFPINDADRTTSYTPQFGEQVRVKGLGGKLATVVELLGDDETILV 774

Query: 701 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 735
           QYGK++VRVKKN IR IP S +    + A    +Q
Sbjct: 775 QYGKVKVRVKKNRIRAIPPSAKNPVTSSATHQGRQ 809


>gi|449457723|ref|XP_004146597.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
 gi|449531305|ref|XP_004172627.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
          Length = 890

 Score =  902 bits (2330), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/745 (60%), Positives = 577/745 (77%), Gaps = 35/745 (4%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQL 59
           MG  V QKA + FG++ EESQKLL+QT+AA A++  S+ LD S IED++GILNSA+SG+L
Sbjct: 69  MGFDVAQKADVRFGRTREESQKLLDQTTAAEAVVSTSRRLDFSGIEDVSGILNSAISGKL 128

Query: 60  LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
           L+ +E+C+VRRTL+A   ++++L +A  +      R+ PL+E+L+NC+FL ELE KI FC
Sbjct: 129 LTIAELCSVRRTLKAARELFEEL-QALAVGNHYSDRFLPLIEILQNCDFLVELERKIEFC 187

Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
           IDC   IILDRASEDLELIR E+KRNME LDSLLK+V+ +I+QAGGID+PLITKRRSRMC
Sbjct: 188 IDCNYSIILDRASEDLELIRLEKKRNMEELDSLLKEVSFKIYQAGGIDRPLITKRRSRMC 247

Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
           V ++A+HK L+ DGI L+ SSSGATYFMEPK AV+ NNMEVRLSNSE AEE +ILS+L+ 
Sbjct: 248 VAVRATHKNLVSDGILLSTSSSGATYFMEPKNAVDLNNMEVRLSNSEKAEEISILSMLST 307

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI-------NI 292
           EI++SE  I+ L+D++LE+DLA ARA + +WM GVCP  S++ +   +SSI       +I
Sbjct: 308 EISESENHIRCLLDKILELDLALARAAYGRWMSGVCPCFSAKGYEGLNSSITDNTLSVDI 367

Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI--DIKVECE 350
           + I++PLLL + L+  S +                        + DFP+PI  DIK+  +
Sbjct: 368 DAIQNPLLLSNYLKKFSGS------------------------VPDFPMPIAIDIKIMHQ 403

Query: 351 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 410
           TRVVVI+GPNTGGKTAS+KTLGLASLM+KAG+YLPAKNHP+LPWFDL+LADIGDHQSLEQ
Sbjct: 404 TRVVVISGPNTGGKTASLKTLGLASLMAKAGMYLPAKNHPKLPWFDLVLADIGDHQSLEQ 463

Query: 411 NLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVT 470
           NLSTFSGHISRI  ILE+ S ESLVLIDEIGSGTDPSEGVAL+TSIL+YL++ V LA+VT
Sbjct: 464 NLSTFSGHISRICKILEVSSDESLVLIDEIGSGTDPSEGVALSTSILRYLKNCVNLAIVT 523

Query: 471 THYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQR 530
           THYADLS +KD D+ FENAA EFSLETL+PTY+ILWGSTGDSNAL IA+SIGFD  II+R
Sbjct: 524 THYADLSRIKDSDSSFENAAMEFSLETLKPTYKILWGSTGDSNALTIAESIGFDPVIIER 583

Query: 531 AQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
           A++ +  L PERQ  RK  L++SL+ ER KLE+Q +  ASLHA+I  LY EI++EAKDLD
Sbjct: 584 AKQWMVNLTPERQDERKGSLFKSLIGERDKLEAQRQKVASLHADISALYYEIQEEAKDLD 643

Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 650
           +R   L A ET++ QQE    K +I+TVVQ+FE QL+ +  D+INSLIK++ESAIA+I E
Sbjct: 644 KRERALMALETKRAQQEAAAIKSKIETVVQEFEEQLKTSGTDQINSLIKKAESAIASICE 703

Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
           A+ P +    S  NT+S+TPQ GEQV V  LG+KLATVVEV  D++ +LVQYGK++ RVK
Sbjct: 704 AYSPTEHSRPSVANTNSYTPQLGEQVFVTGLGNKLATVVEVSDDEEMILVQYGKIKARVK 763

Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQ 735
           K++++ +PNS +K AAN  P  +KQ
Sbjct: 764 KSSVKALPNSGKKAAANTLPFSKKQ 788


>gi|334183641|ref|NP_001185315.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
 gi|6227005|gb|AAF06041.1|AC009360_6 Contains similarity to gb|D90908 DNA mismatch repair protein MutS2
           from Synechocystis sp. and is a member of PF|00488 Muts
           family of mismatch repair proteins [Arabidopsis
           thaliana]
 gi|332196205|gb|AEE34326.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
          Length = 876

 Score =  818 bits (2114), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/740 (57%), Positives = 555/740 (75%), Gaps = 34/740 (4%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALA---MMQSQPLDLSTIEDIAGILNSAVSG 57
           MG +  + A+IP G S EES+ LLN+TSAALA   MM+S+ L LS I+D++ I+  AVSG
Sbjct: 71  MGLSATKNAEIPVGNSPEESRNLLNETSAALAAMEMMKSRGLGLSEIQDLSDIVERAVSG 130

Query: 58  QLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
           QLL+  E+C VR TL A  + ++KL +AA  D     R +PL+++L+ C+F   L++KI 
Sbjct: 131 QLLTVRELCTVRSTLTAATSTFQKLRKAAISDN----RVTPLVDILQGCDFKDTLQQKIS 186

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
           FCIDC + +ILDRASEDLE+IR+ER+RNMENLDSLLKK++ +IF AGGI+KPLIT+RRSR
Sbjct: 187 FCIDCNMTMILDRASEDLEIIRSERRRNMENLDSLLKKISTKIFLAGGINKPLITQRRSR 246

Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
           MCV I+A+HK LLP G+ L+VSSS AT F+EPK AVE NNMEVR +NSE AEE AILS+L
Sbjct: 247 MCVAIRATHKSLLPGGVVLSVSSSRATCFIEPKEAVELNNMEVRHANSEKAEEMAILSIL 306

Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
           T+E+  ++REI +L+DR+LE+D+AFARA  A W++GV P ++S+   +   +++I+  +H
Sbjct: 307 TSEVVMAQREILHLLDRILELDIAFARASHANWINGVYPNVTSEHTKTPGLAVDIDSAQH 366

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
           PLLLGS L S         P   D+                FPVP+DIKVE   +VVVI+
Sbjct: 367 PLLLGSVLGS---------PNGGDI----------------FPVPVDIKVESSAKVVVIS 401

Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
           GPNTGGKTA +KTLGL SLMSK+G+YLPAKN PRLPWFDLILADIGD QSLEQ+LSTFSG
Sbjct: 402 GPNTGGKTALLKTLGLLSLMSKSGMYLPAKNCPRLPWFDLILADIGDPQSLEQSLSTFSG 461

Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
           HISRI  IL++ S  SLVL+DEI SGTDPSEGVALATSILQY+++RV +AVV+THY DLS
Sbjct: 462 HISRIRQILDIASENSLVLLDEICSGTDPSEGVALATSILQYIKNRVNVAVVSTHYGDLS 521

Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
            LKD + RF+NAA EFS+ETL+PT+R+LWGSTG SNAL +AKSIGF+++I++ A K  E+
Sbjct: 522 RLKDNEPRFQNAAMEFSMETLQPTFRVLWGSTGLSNALRVAKSIGFNKRILENAHKWTEK 581

Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
           L PE+   RK  L+QSLMEER KL+ QA   A+ H ++M+LY E+E E+ DLD+R   L 
Sbjct: 582 LNPEQDVERKGSLFQSLMEERNKLKLQATKTAAFHRDLMNLYHELEHESHDLDKRERALL 641

Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
            KETQ+VQ++LN AK +++ +V +FE+QL    AD+ NSLI ++E A+A I+EA  P D 
Sbjct: 642 KKETQKVQEDLNSAKSKMERLVAEFESQLEITQADQYNSLILKTEEAVAEIIEACCPMDP 701

Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG-DDDTVLVQYGKMRVRVKKNNIRP 716
            S+ E   S ++PQ GE+V V  LGDKL TVVE PG DDDTVLVQ+GK+RVR+KK +I+P
Sbjct: 702 DSLEE-EYSDYSPQAGEKVLVTGLGDKLGTVVEEPGDDDDTVLVQHGKIRVRIKKKDIKP 760

Query: 717 IPNSKRKNAANPAPRLRKQV 736
           +P S     +N + R ++Q+
Sbjct: 761 LPRSTSSQTSNRSLRSKRQI 780


>gi|15217840|ref|NP_176687.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
 gi|332196204|gb|AEE34325.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
          Length = 857

 Score =  816 bits (2108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/739 (57%), Positives = 554/739 (74%), Gaps = 34/739 (4%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALA---MMQSQPLDLSTIEDIAGILNSAVSG 57
           MG +  + A+IP G S EES+ LLN+TSAALA   MM+S+ L LS I+D++ I+  AVSG
Sbjct: 71  MGLSATKNAEIPVGNSPEESRNLLNETSAALAAMEMMKSRGLGLSEIQDLSDIVERAVSG 130

Query: 58  QLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
           QLL+  E+C VR TL A  + ++KL +AA  D     R +PL+++L+ C+F   L++KI 
Sbjct: 131 QLLTVRELCTVRSTLTAATSTFQKLRKAAISD----NRVTPLVDILQGCDFKDTLQQKIS 186

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
           FCIDC + +ILDRASEDLE+IR+ER+RNMENLDSLLKK++ +IF AGGI+KPLIT+RRSR
Sbjct: 187 FCIDCNMTMILDRASEDLEIIRSERRRNMENLDSLLKKISTKIFLAGGINKPLITQRRSR 246

Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
           MCV I+A+HK LLP G+ L+VSSS AT F+EPK AVE NNMEVR +NSE AEE AILS+L
Sbjct: 247 MCVAIRATHKSLLPGGVVLSVSSSRATCFIEPKEAVELNNMEVRHANSEKAEEMAILSIL 306

Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
           T+E+  ++REI +L+DR+LE+D+AFARA  A W++GV P ++S+   +   +++I+  +H
Sbjct: 307 TSEVVMAQREILHLLDRILELDIAFARASHANWINGVYPNVTSEHTKTPGLAVDIDSAQH 366

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
           PLLLGS L S         P   D+                FPVP+DIKVE   +VVVI+
Sbjct: 367 PLLLGSVLGS---------PNGGDI----------------FPVPVDIKVESSAKVVVIS 401

Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
           GPNTGGKTA +KTLGL SLMSK+G+YLPAKN PRLPWFDLILADIGD QSLEQ+LSTFSG
Sbjct: 402 GPNTGGKTALLKTLGLLSLMSKSGMYLPAKNCPRLPWFDLILADIGDPQSLEQSLSTFSG 461

Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
           HISRI  IL++ S  SLVL+DEI SGTDPSEGVALATSILQY+++RV +AVV+THY DLS
Sbjct: 462 HISRIRQILDIASENSLVLLDEICSGTDPSEGVALATSILQYIKNRVNVAVVSTHYGDLS 521

Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
            LKD + RF+NAA EFS+ETL+PT+R+LWGSTG SNAL +AKSIGF+++I++ A K  E+
Sbjct: 522 RLKDNEPRFQNAAMEFSMETLQPTFRVLWGSTGLSNALRVAKSIGFNKRILENAHKWTEK 581

Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
           L PE+   RK  L+QSLMEER KL+ QA   A+ H ++M+LY E+E E+ DLD+R   L 
Sbjct: 582 LNPEQDVERKGSLFQSLMEERNKLKLQATKTAAFHRDLMNLYHELEHESHDLDKRERALL 641

Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
            KETQ+VQ++LN AK +++ +V +FE+QL    AD+ NSLI ++E A+A I+EA  P D 
Sbjct: 642 KKETQKVQEDLNSAKSKMERLVAEFESQLEITQADQYNSLILKTEEAVAEIIEACCPMDP 701

Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG-DDDTVLVQYGKMRVRVKKNNIRP 716
            S+ E   S ++PQ GE+V V  LGDKL TVVE PG DDDTVLVQ+GK+RVR+KK +I+P
Sbjct: 702 DSLEE-EYSDYSPQAGEKVLVTGLGDKLGTVVEEPGDDDDTVLVQHGKIRVRIKKKDIKP 760

Query: 717 IPNSKRKNAANPAPRLRKQ 735
           +P S     +N + R ++Q
Sbjct: 761 LPRSTSSQTSNRSLRSKRQ 779


>gi|297840849|ref|XP_002888306.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334147|gb|EFH64565.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 891

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/748 (56%), Positives = 557/748 (74%), Gaps = 44/748 (5%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSG 57
           MG +  + A+IP G S EES+ LL++T+AALA M+   SQ L LS I+D++ I+  AV+G
Sbjct: 79  MGLSATKNAEIPVGNSPEESRNLLDETAAALAAMEMMESQRLGLSEIQDLSDIVERAVAG 138

Query: 58  QLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
           QLL+  E+C+VR TL A  +V++KL +AA  D    +R SPL+ L++ C+F   L++KIG
Sbjct: 139 QLLTVRELCSVRSTLMAATSVFQKLRKAAISD----KRVSPLVGLVQGCDFKDTLQQKIG 194

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
           FCIDC + +ILDRASEDLE+IR+ER+RNME LDSLLKK++ QIFQAGGID+PLIT+RRSR
Sbjct: 195 FCIDCNMSMILDRASEDLEIIRSERRRNMEKLDSLLKKISTQIFQAGGIDRPLITQRRSR 254

Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
           MCV I+A+HK LLP G+ L+VSSS AT ++EPK AVE NNMEVR +NSE AEE AILS+L
Sbjct: 255 MCVAIRATHKSLLPGGVVLSVSSSRATCYIEPKEAVELNNMEVRHANSEKAEEMAILSIL 314

Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ---------SHVSFDS 288
           T+E++ ++++I +L+DR+LE+D+AFARA  A+WM+GV P ++S+          H S   
Sbjct: 315 TSEVSMAQKDILHLLDRILELDIAFARASHAKWMNGVYPNVTSEHTKTPGLGGDHKSL-- 372

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
           S++I+  +HPLLLGS L                        GS + G+  FPVPIDIKVE
Sbjct: 373 SVDIDSAQHPLLLGSVL------------------------GSPNDGMV-FPVPIDIKVE 407

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
              +VVVI+GPNTGGKTA +KTLGL SLMSK+G+YLPAKN PRLPWFD ILADIGD QSL
Sbjct: 408 SRAKVVVISGPNTGGKTALLKTLGLISLMSKSGMYLPAKNCPRLPWFDFILADIGDPQSL 467

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQ+LSTFSGHISRI  IL++ S  SLVL+DEI SGTDPSEGVALATSILQY+++RV +AV
Sbjct: 468 EQSLSTFSGHISRIRQILDIASENSLVLLDEICSGTDPSEGVALATSILQYIKNRVNVAV 527

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
           V+THY DLS LKD + +F+NAA EFS+ETL+PT+R+LWGSTG SNAL +AKSIGF+  I+
Sbjct: 528 VSTHYGDLSRLKDNEPQFQNAAMEFSMETLQPTFRVLWGSTGLSNALTVAKSIGFNTGIL 587

Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
           + A K  E+L PE+   RK  L+QSL+EER KL+ QA    + H ++M+LY E+E E+ D
Sbjct: 588 ENAHKWTEKLNPEQDVERKGSLFQSLVEERNKLKLQASKTEAFHRDLMNLYHELEHESHD 647

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
           L++R   L  KETQ+VQ++LN AK ++  +V +F++QL  A AD+ NSLI ++E A+A I
Sbjct: 648 LEKRERALLKKETQKVQEDLNSAKSKMQKLVAEFKSQLEIAQADQYNSLILKTEEAVAEI 707

Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
           +EA  P D  S+ E   S ++PQ GE+V V  LGDKL TVVE PGDD+TVLVQ+GK+RVR
Sbjct: 708 IEACCPIDLDSIEEP-YSDYSPQAGEKVLVTGLGDKLGTVVEEPGDDETVLVQHGKIRVR 766

Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQV 736
           +KK +I+P+P S     +N + R ++QV
Sbjct: 767 IKKKDIKPLPRSTSSQTSNRSLRSKRQV 794


>gi|242074804|ref|XP_002447338.1| hypothetical protein SORBIDRAFT_06g033170 [Sorghum bicolor]
 gi|241938521|gb|EES11666.1| hypothetical protein SORBIDRAFT_06g033170 [Sorghum bicolor]
          Length = 912

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/720 (55%), Positives = 542/720 (75%), Gaps = 32/720 (4%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G A  +  ++P G+S EES++ ++QT+AA+ +    PLD   +ED++ ++ +A SG+ L+
Sbjct: 92  GRAACEGRRVPVGRSREESERFIDQTAAAVLL--PTPLDFGGVEDVSALVAAAASGRALA 149

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
             E+CAV R++RAV  V+ +L   A+   D   RYS L+++L+ C+FLTEL ++I FC+D
Sbjct: 150 VRELCAVGRSIRAVRAVFDQLKRLADEMPDG--RYSSLVDILQGCDFLTELVQRIEFCLD 207

Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
             L ++LDRAS+ LE+IR ER+RN+E L+SLLK  AA+IFQAGGID PL+TKRRSRMCVG
Sbjct: 208 STLSLVLDRASKKLEIIRRERRRNIEMLESLLKDTAAKIFQAGGIDSPLVTKRRSRMCVG 267

Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
           +KASHK+L+P GI L+ S SGATYF+EP+ AVE NN EV+LS  E AEE AILSLLT+ I
Sbjct: 268 VKASHKHLVPGGIVLSSSGSGATYFVEPRDAVELNNREVKLSGDERAEELAILSLLTSMI 327

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
           A S+ +I+ LMD+VLE+DLA AR  +A+W +GV P  S     SQS    D S+ IEGI+
Sbjct: 328 ADSQLKIRNLMDKVLELDLACARGSYARWTNGVKPTFSDSYTISQSDQCTDYSVYIEGIR 387

Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
           HPLLL                     E S M   S ++  S+ PVP+D+ V+   R+VVI
Sbjct: 388 HPLLL---------------------EQSLMAEESTTRA-SEMPVPLDMWVKKHARIVVI 425

Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
           +GPNTGGKTA+MKTLGL+SLMSKAG++ PAK  PR+PWFD +LADIGDHQSLE +LSTFS
Sbjct: 426 SGPNTGGKTATMKTLGLSSLMSKAGMFFPAKGSPRIPWFDQVLADIGDHQSLEHSLSTFS 485

Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
           GHISR+  I+E+VS++SLVLIDEIGSGTDPSEGVAL+TSIL+YL  +V LA+VTTHYADL
Sbjct: 486 GHISRLRKIVEIVSKDSLVLIDEIGSGTDPSEGVALSTSILKYLASKVNLAIVTTHYADL 545

Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           S L+  D RFENAA EF +ETL+PTYRILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE
Sbjct: 546 SRLQSVDNRFENAAMEFCVETLQPTYRILWGSTGNSNALSIAKSIGFDQKVLDRAQEWVE 605

Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
           +L P++Q+ R+  LY SL++E++ LESQA  AAS+ +++  LY EI  EA DL+ R A L
Sbjct: 606 KLLPDKQKERQGLLYDSLLDEKKLLESQANEAASVLSQVEGLYNEIRLEADDLESRVAGL 665

Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
           +A+ETQ+VQQEL   K Q+DT++++FE QL+++  ++ NSL++++E+A A++V AH+P++
Sbjct: 666 RARETQKVQQELKVVKSQMDTIIKNFEAQLKNSKLEQYNSLMRKAEAATASVVAAHQPNE 725

Query: 657 DFSVSETNTSSFTPQFGEQVHVKSL-GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
                + N SSF PQ G++V+++ L G  +ATVVE  G+D++ +VQYGK++VRVK+N I+
Sbjct: 726 ITFDDDENQSSFVPQIGDKVYIQGLGGGTMATVVETFGEDESCMVQYGKIKVRVKRNKIK 785


>gi|218195837|gb|EEC78264.1| hypothetical protein OsI_17950 [Oryza sativa Indica Group]
          Length = 916

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/734 (51%), Positives = 541/734 (73%), Gaps = 21/734 (2%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G A   + ++P G+S EES++LL QT+AA  +      D   +ED++  + +A   +LL+
Sbjct: 92  GRAACGEGRVPVGRSREESERLLEQTAAAALLPAPL--DFGGVEDVSSAIAAAAGARLLA 149

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
             EIC V R++RA   V+ +L   +E   D  + Y+PLL+++++C+FLTEL ++I FC+D
Sbjct: 150 VREICGVGRSIRAARRVFDQLKTLSEETPDG-RSYTPLLDIMQDCDFLTELVQRIEFCLD 208

Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
             L ++LDRAS+ L  IR ER++N++ L+SLL+  + +IFQ GGID P++TKRRSRMCVG
Sbjct: 209 YTLSVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVG 268

Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
           +KASHK+L+P GI L+ S SGATYFMEP+ A+  NNMEV+LS  E AEE AIL LLT+ I
Sbjct: 269 VKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSI 328

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
           A SE +I++LM ++LE+DLA AR  +A W++ V P  +     +Q + + + S+ IEGI+
Sbjct: 329 ADSEMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQ 388

Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
           HPLLL    +SLS    ++   K  + +  +        +S  P+P+D++V  +TR++VI
Sbjct: 389 HPLLLE---QSLSMVKESTGVGKGQLSDEHL--------VSPMPIPLDMQVRNDTRIIVI 437

Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
           +GPNTGGKTA+MKTLGLASLMSKAG++ PAK  PRLPWFD +LADIGDHQSLE +LSTFS
Sbjct: 438 SGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLSTFS 497

Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
           GHISR+  I+++VS++SLVLIDEIGSGTDPS+GVAL+TSIL+YL  R+ LA+VTTHYADL
Sbjct: 498 GHISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGVALSTSILKYLASRLNLAIVTTHYADL 557

Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           S LK  D RFENAA EF LETL+PTY+ILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE
Sbjct: 558 SRLKAVDDRFENAAMEFCLETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQEWVE 617

Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
           +L P++Q+ R+  LY SL++ER+ LESQA  AAS+ +++  LY EI  EA DLD R A L
Sbjct: 618 KLLPDKQKERQGLLYGSLLDERKLLESQANEAASVVSDVERLYNEIRSEADDLDSRVAAL 677

Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
           +A E+++VQQEL F K Q+D ++++FE+QL+++  ++ NSL++++E+A A++   H+P D
Sbjct: 678 RATESEKVQQELKFVKSQMDQIIKNFESQLKNSELEQYNSLMRKAEAATASLAATHQPTD 737

Query: 657 DFSVSETNTSSFTPQFGEQVHVKSL-GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
                E N SS+ P+ G++V+V+ L G  +A+VVE  G+D + +VQYGK++VRVK N I+
Sbjct: 738 FTFGDEENESSYVPEIGDKVYVEGLGGGSMASVVETLGEDGSCMVQYGKIKVRVKGNKIK 797

Query: 716 PIP-NSKRKNAANP 728
            +   +K  +A++P
Sbjct: 798 LVQRGTKDTSASSP 811


>gi|32487407|emb|CAE05741.1| OSJNBb0017I01.21 [Oryza sativa Japonica Group]
          Length = 921

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/736 (51%), Positives = 541/736 (73%), Gaps = 25/736 (3%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G A   + ++P G+S EES++LL QT+AA  +      D   +ED++  + +A   +LL+
Sbjct: 97  GRAACGEGRVPVGRSREESERLLEQTAAAALLPAPL--DFGGVEDVSAAIAAAAGARLLA 154

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
             EIC V R++RA   V+ +L   +E   D  + Y+PLL+++++C+FLTEL ++I FC+D
Sbjct: 155 VREICGVGRSIRAARRVFDQLKTLSEETPDG-RSYTPLLDIMQDCDFLTELVQRIEFCLD 213

Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
             L ++LDRAS+ L  IR ER++N++ L+SLL+  + +IFQ GGID P++TKRRSRMCVG
Sbjct: 214 YTLSVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVG 273

Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
           +KASHK+L+P GI L+ S SGATYFMEP+ A+  NNMEV+LS  E AEE AIL LLT+ I
Sbjct: 274 VKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSI 333

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
           A SE +I++LM ++LE+DLA AR  +A W++ V P  +     +Q + + + S+ IEGI+
Sbjct: 334 ADSEMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQ 393

Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG--ISDFPVPIDIKVECETRVV 354
           HPLLL  SL  +              E++ +  G LS    +S  P+P+D++V  +TR++
Sbjct: 394 HPLLLEQSLSMVK-------------ESTRVGKGQLSDEHLVSPMPIPLDMQVRNDTRII 440

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
           VI+GPNTGGKTA+MKTLGLASLMSKAG++ PAK  PRLPWFD +LADIGDHQSLE +LST
Sbjct: 441 VISGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLST 500

Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
           FSGHISR+  I+++VS++SLVLIDEIGSGTDPS+GVAL+TSIL+YL  R+ LA+VTTHYA
Sbjct: 501 FSGHISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGVALSTSILKYLASRLNLAIVTTHYA 560

Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
           DLS LK  D RFENAA EF LETL+PTY+ILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ 
Sbjct: 561 DLSRLKAVDDRFENAAMEFCLETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQEW 620

Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
           VE+L P++Q+ R+  LY SL++ER+ LESQA  AAS+ +++  LY EI  EA DLD R A
Sbjct: 621 VEKLLPDKQKERQGLLYGSLLDERKLLESQANEAASVLSDVERLYNEIRSEADDLDSRVA 680

Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP 654
            L+A E+++VQQEL F K Q+D ++++FE+QL+++  ++ NSL++++E+A A++   H+P
Sbjct: 681 ALRATESEKVQQELKFVKSQMDQIIKNFESQLKNSELEQYNSLMRKAEAATASLAATHQP 740

Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSL-GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
            D     E N SS+ P+ G++V+V+ L G  +A+VVE  G+D + +VQYGK++VRVK N 
Sbjct: 741 TDFTFGDEENESSYVPEIGDKVYVEGLGGGSMASVVETLGEDGSCMVQYGKIKVRVKGNK 800

Query: 714 IRPIP-NSKRKNAANP 728
           I+ +   +K  +A++P
Sbjct: 801 IKLVQRGTKDTSASSP 816


>gi|414584744|tpg|DAA35315.1| TPA: hypothetical protein ZEAMMB73_219783 [Zea mays]
          Length = 901

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/721 (54%), Positives = 538/721 (74%), Gaps = 33/721 (4%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G A  +  ++P G+S EES++L++QT+AA+ +    PLD   +ED++ ++ +AV+G+ L+
Sbjct: 90  GRAACEGGRVPVGRSREESERLIDQTAAAVLL--PTPLDFGGVEDVSALVAAAVAGRALA 147

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
             E+CAV R++RAV  V+ +L   A+   D   RYS L+++L+ C+FLTEL ++I FC+D
Sbjct: 148 VRELCAVGRSIRAVRAVFHQLKRLADEMPDG--RYSSLVDILQGCDFLTELVQRIEFCLD 205

Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
             L ++LDRAS+ LE+IR ER+RN+E L+SLLK  AA+IF AGGID PL+TKRRSRMCVG
Sbjct: 206 STLSLVLDRASKKLEIIRRERRRNIEMLESLLKDTAAKIFLAGGIDNPLVTKRRSRMCVG 265

Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
           +KASHK+L+P GI L+ S SGATYFMEP+ AVE NN EV+LS  E AEE  +LSLLT+ I
Sbjct: 266 VKASHKHLMPGGIVLSSSGSGATYFMEPQDAVELNNREVKLSGEERAEELVVLSLLTSMI 325

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
           A S+ +I+ LMD VLE+DLA AR  +A W + V P  +     SQS    D SI IEGI+
Sbjct: 326 ADSQLKIRNLMDNVLELDLACARGSYALWTNSVRPTFTDSYTISQSDQCNDYSIYIEGIR 385

Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
           HPLLL  SL +           +S  E SEM            PVP+D+ V+   R+VVI
Sbjct: 386 HPLLLEQSLMAE----------ESTTEASEM------------PVPLDMWVKKNARIVVI 423

Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
           +GPNTGGKTA+MKTLGL+SLMSKAG++ PAK  PR+PWFD +LADIGDHQSLE +LSTFS
Sbjct: 424 SGPNTGGKTATMKTLGLSSLMSKAGIFFPAKGRPRIPWFDQVLADIGDHQSLEHSLSTFS 483

Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
           GHISR+  I+E+VS++SLVLIDEIGSGTDP+EGVAL+TSIL+YL  RV LA+VTTHYADL
Sbjct: 484 GHISRLRKIVEMVSKDSLVLIDEIGSGTDPAEGVALSTSILKYLASRVNLAIVTTHYADL 543

Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           S L+  D RFENAA EF +ETL+PTYRILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE
Sbjct: 544 SRLQSVDNRFENAAMEFCVETLQPTYRILWGSTGNSNALSIAKSIGFDQKVLDRAQEWVE 603

Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
           +L P++Q+ R+  LY SL++E+  LESQA  AAS+ +++  LY EI  EA DL+ R A L
Sbjct: 604 KLLPDKQKERQGLLYDSLVDEKELLESQANEAASVLSQVEGLYNEIRLEADDLESRVAAL 663

Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
           +A+ETQ+VQQEL   K ++DT++++FE QL+++  ++ NSL++++E+A A++V AH+P +
Sbjct: 664 RARETQKVQQELKVVKYRMDTIIKNFEAQLKNSKLEQYNSLMRKAEAATASVVAAHQPSE 723

Query: 657 -DFSVSETNTSSFTPQFGEQVHVKSL-GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
             F   + N  SF  Q G++V+V+ L G+ +ATVVE  G+D++ +VQYGK++VRVK++ I
Sbjct: 724 IAFDDDDENRISFVSQVGDKVYVQGLGGETMATVVETLGEDESCMVQYGKIKVRVKRSRI 783

Query: 715 R 715
           +
Sbjct: 784 K 784


>gi|357162691|ref|XP_003579491.1| PREDICTED: mutS2 protein-like [Brachypodium distachyon]
          Length = 927

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/718 (53%), Positives = 531/718 (73%), Gaps = 26/718 (3%)

Query: 9   AQIPFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEI 65
            ++P G+S EES++LL QT+AA A++ S    PLD   + D++ ++ +A  G+LL+  EI
Sbjct: 106 GRVPVGRSREESERLLEQTAAAAALLSSSSSAPLDFGGVGDVSAVVAAAARGRLLAVREI 165

Query: 66  CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
           C V R+LRA   V+ ++    +   D  +RYSPLL++L++C+FLTEL + I FC+D  L 
Sbjct: 166 CGVGRSLRAARGVFDQVKGLTDEMPD--ERYSPLLDILQDCDFLTELVQMIEFCLDSNLS 223

Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
           ++LDRASE L  IR ER+ N+E L+SLL+  + +IFQAGG+D PL+TKRRSRMCVG+KAS
Sbjct: 224 MVLDRASEKLGTIRKERRSNIEILESLLRDASMKIFQAGGVDSPLVTKRRSRMCVGVKAS 283

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           HK+LLP GI L+ S SGATYFMEP+ AV+ NNMEV+LS+ E  EE A+L LLT+ IA S 
Sbjct: 284 HKHLLPGGIVLSSSGSGATYFMEPRDAVKLNNMEVKLSSDERTEELAVLGLLTSRIADSR 343

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIKHPLL 300
            +I++LM +++E+DLA AR  +A W++GV P  S      Q   S D S+ I+GI+HPLL
Sbjct: 344 MKIRHLMGKIMELDLACARGSYALWINGVRPAFSDRDNSGQLDPSSDFSVFIDGIQHPLL 403

Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK--GISDFPVPIDIKVECETRVVVITG 358
           L  S   ++  S+            E+  G LS+   +S  PVP+D+ V+ +TR+VVI+G
Sbjct: 404 LEQSF-GIAKGST------------EVGKGQLSEEHPVSSMPVPLDMHVKSDTRIVVISG 450

Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
           PNTGGKTA+MKTLGLA+LMSKAG++ PAK  P+LPWFD +LADIGDHQSLE +LSTFSG+
Sbjct: 451 PNTGGKTATMKTLGLATLMSKAGMFFPAKGSPKLPWFDQVLADIGDHQSLENSLSTFSGN 510

Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
           ISR+  I+++VSR+SLVLIDEIGSGTDPSEGV+L+TSIL+YL  R+ LA+VTTHYADLS 
Sbjct: 511 ISRLRKIVQVVSRDSLVLIDEIGSGTDPSEGVSLSTSILKYLAGRLNLAIVTTHYADLSR 570

Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
           LK  D RFENAA EF LETL+PTYRILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE+L
Sbjct: 571 LKAVDGRFENAAMEFCLETLKPTYRILWGSTGNSNALSIAKSIGFDQKVLDRAQEWVEKL 630

Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
            P++Q+ R+  LY SL++ER  LESQA   AS+ +E+  LY EI  EA DLD R A L+A
Sbjct: 631 LPDKQKERQGLLYGSLLDERNLLESQANEVASVLSEVEVLYNEICLEADDLDNRVAALRA 690

Query: 599 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
           +E+Q+VQ EL   K Q+D ++++FE QL+++  ++ NS++K++E++ A++  AH+P +  
Sbjct: 691 RESQKVQHELKLVKSQMDLIIRNFEVQLKNSKLEQYNSVMKKAEASTASLAAAHQPTEFA 750

Query: 659 SVSETNTSSFTPQFGEQVHVKSL-GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
              + N SS+ PQ G++V+V+ L G  LATVVE+  +D + +VQYGK++VR K N ++
Sbjct: 751 FSDDENKSSYVPQIGDKVYVEGLGGGSLATVVEILSEDGSCMVQYGKIKVRAKNNKMK 808


>gi|90399000|emb|CAJ86270.1| H0901F07.7 [Oryza sativa Indica Group]
          Length = 889

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/718 (51%), Positives = 529/718 (73%), Gaps = 20/718 (2%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G A   + ++P G+S EES++LL QT+AA  +      D   +ED++  + +A   +LL+
Sbjct: 92  GRAACGEGRVPVGRSREESERLLEQTAAAALLPAPL--DFGGVEDVSSAIAAAAGARLLA 149

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
             EIC V R++RA   V+ +L   +E   D  + Y+PLL+++++C+FLTEL ++I FC+D
Sbjct: 150 VREICGVGRSIRAARRVFDQLKTLSEETPDG-RSYTPLLDIMQDCDFLTELVQRIEFCLD 208

Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
             L ++LDRAS+ L  IR ER++N++ L+SLL+  + +IFQ GGID P++TKRRSRMCVG
Sbjct: 209 YTLSVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVG 268

Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
           +KASHK+L+P GI L+ S SGATYFMEP+ A+  NNMEV+LS  E AEE AIL LLT+ I
Sbjct: 269 VKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSI 328

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
           A SE +I++LM ++LE+DLA AR  +A W++ V P  +     +Q + + + S+ IEGI+
Sbjct: 329 ADSEMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQ 388

Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
           HPLLL    +SLS    ++   K  + +  +        +S  P+P+D++V  +TR++VI
Sbjct: 389 HPLLLE---QSLSMVKESTGVGKGQLSDEHL--------VSPMPIPLDMQVRNDTRIIVI 437

Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
           +GPNTGGKTA+MKTLGLASLMSKAG++ PAK  PRLPWFD +LADIGDHQSLE +LSTFS
Sbjct: 438 SGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLSTFS 497

Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
           GHISR+  I+++VS++SLVLIDEIGSGTDPS+GVAL+TSIL+YL  R+ LA+VTTHYADL
Sbjct: 498 GHISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGVALSTSILKYLASRLNLAIVTTHYADL 557

Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           S LK  D RFENAA EF LETL+PTY+ILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE
Sbjct: 558 SRLKAVDDRFENAAMEFCLETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQEWVE 617

Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
           +L P++Q+ R+  LY SL++ER+ LESQA  AAS+ +++  LY EI  EA DLD R A L
Sbjct: 618 KLLPDKQKERQGLLYGSLLDERKLLESQANEAASVVSDVERLYNEIRSEADDLDSRVAAL 677

Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
           +A E+++VQQEL F K Q+D ++++FE+QL+++  ++ NSL++++E+A A++   H+P D
Sbjct: 678 RATESEKVQQELKFVKSQMDQIIKNFESQLKNSELEQYNSLMRKAEAATASLAATHQPTD 737

Query: 657 DFSVSETNTSSFTPQFGEQVHVKSL-GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
                E N SS+ P+ G++V+V+ L G  +A+VVE  G+D + +VQYGK++ R  K +
Sbjct: 738 FTFGDEENESSYVPEIGDKVYVEGLGGGSMASVVETLGEDGSCMVQYGKIKGRTPKRS 795


>gi|222629785|gb|EEE61917.1| hypothetical protein OsJ_16650 [Oryza sativa Japonica Group]
          Length = 841

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/673 (53%), Positives = 502/673 (74%), Gaps = 29/673 (4%)

Query: 65  ICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKL 124
           +CA    L  V +  K L+E    DG S   Y+PLL+++++C+FLTEL ++I FC+D  L
Sbjct: 84  VCA---RLAGVFDQLKTLSEETP-DGRS---YTPLLDIMQDCDFLTELVQRIEFCLDYTL 136

Query: 125 LIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
            ++LDRAS+ L  IR ER++N++ L+SLL+  + +IFQ GGID P++TKRRSRMCVG+KA
Sbjct: 137 SVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVGVKA 196

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
           SHK+L+P GI L+ S SGATYFMEP+ A+  NNMEV+LS  E AEE AIL LLT+ IA S
Sbjct: 197 SHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSIADS 256

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIKHPL 299
           E +I++LM ++LE+DLA AR  +A W++ V P  +     +Q + + + S+ IEGI+HPL
Sbjct: 257 EMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQHPL 316

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG--ISDFPVPIDIKVECETRVVVIT 357
           LL  SL  +              E++ +  G LS    +S  P+P+D++V  +TR++VI+
Sbjct: 317 LLEQSLSMVK-------------ESTRVGKGQLSDEHLVSPMPIPLDMQVRNDTRIIVIS 363

Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
           GPNTGGKTA+MKTLGLASLMSKAG++ PAK  PRLPWFD +LADIGDHQSLE +LSTFSG
Sbjct: 364 GPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLSTFSG 423

Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
           HISR+  I+++VS++SLVLIDEIGSGTDPS+GVAL+TSIL+YL  R+ LA+VTTHYADLS
Sbjct: 424 HISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGVALSTSILKYLASRLNLAIVTTHYADLS 483

Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
            LK  D RFENAA EF LETL+PTY+ILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE+
Sbjct: 484 RLKAVDDRFENAAMEFCLETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQEWVEK 543

Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
           L P++Q+ R+  LY SL++ER+ LESQA  AAS+ +++  LY EI  EA DLD R A L+
Sbjct: 544 LLPDKQKERQGLLYGSLLDERKLLESQANEAASVLSDVERLYNEIRSEADDLDSRVAALR 603

Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
           A E+++VQQEL F K Q+D ++++FE+QL+++  ++ NSL++++E+A A++   H+P D 
Sbjct: 604 ATESEKVQQELKFVKSQMDQIIKNFESQLKNSELEQYNSLMRKAEAATASLAATHQPTDF 663

Query: 658 FSVSETNTSSFTPQFGEQVHVKSL-GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
               E N SS+ P+ G++V+V+ L G  +A+VVE  G+D + +VQYGK++VRVK N I+ 
Sbjct: 664 TFGDEENESSYVPEIGDKVYVEGLGGGSMASVVETLGEDGSCMVQYGKIKVRVKGNKIKL 723

Query: 717 IP-NSKRKNAANP 728
           +   +K  +A++P
Sbjct: 724 VQRGTKDTSASSP 736


>gi|168030914|ref|XP_001767967.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680809|gb|EDQ67242.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 964

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 319/780 (40%), Positives = 468/780 (60%), Gaps = 56/780 (7%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
           M  AV +K  +P G+++ ES++L  QT AA   + S PL+ S IED+   +  A SG + 
Sbjct: 98  MAVAVARKGDLPIGRTVVESEELQAQTVAA--QLLSSPLEFSGIEDLRKFIEDAQSGNVC 155

Query: 61  SPSEICAVRRTLRAVNNVWKKLT--EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
              E+C VR+TL AV  +  ++     + L         PL  ++  CN  +ELE  I +
Sbjct: 156 QLEELCLVRKTLAAVRRLHNQVVGQSHSSLHVSGAASIGPLQAVMLGCNLCSELESAIEY 215

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
           C+DC    ILDRAS  L  +R  R+ N   L+SL+K+ AA +F AGG+D  L+TKRR RM
Sbjct: 216 CLDCSRSTILDRASSKLASVRLMRQENSMALESLIKETAAMVFSAGGMDSQLVTKRRGRM 275

Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
           CV ++AS K LL  G+ L+VS++GATYFMEP+ A+ FNN E++L+  E  EE A+L  LT
Sbjct: 276 CVAVRASQKGLLKGGVTLDVSNTGATYFMEPESAIHFNNEEIQLAEEEKLEEIAVLRQLT 335

Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL---------SSQSHVSFDSS 289
             +  +  ++  L++RV  +DLA ARAG + W++G  P+          SS S  + D++
Sbjct: 336 FMLLDTSDDVIDLLERVTTLDLACARAGHSAWLNGARPVFVNSMADSMSSSHSSSALDTT 395

Query: 290 --------INIEGIKHPLLLGSSL-------------RSLSAASSNSNPLKSDVENSEMT 328
                   ++I+G++HPLLLGS+L             R    +  +S+ LK  VE+S + 
Sbjct: 396 PAKEDLLLVDIKGVRHPLLLGSALESPVNSPRYGIYIRQKEKSRRSSSGLKGAVESSNVD 455

Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
                      PVPIDI +    +VV ITGPNTGGKTA++KTLG+ +LM+KAGL LPA  
Sbjct: 456 --------RMLPVPIDINIRTGVKVVTITGPNTGGKTAALKTLGVVALMAKAGLCLPATG 507

Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
            PRLPWFD ILADIGD QSLE+NLSTFSGHI R+  ILE  + +SL+L+DEIG GTDPSE
Sbjct: 508 VPRLPWFDSILADIGDDQSLERNLSTFSGHIRRVRQILEAGTAQSLILLDEIGGGTDPSE 567

Query: 449 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
           G ALAT+IL+ L   V L + TTH A+L  LKD D  FENA+ EF ++TLRPTYR+LWG 
Sbjct: 568 GAALATAILRNLAASVQLTLATTHCAELRTLKDHDPEFENASVEFDVKTLRPTYRVLWGI 627

Query: 509 TGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTA 568
            G SNALNIA S+GFD +++ RA++LV +L P     R +EL   L+++R +   ++  A
Sbjct: 628 AGQSNALNIAASLGFDSEVLTRARELVTKLVPASLGARSTELMVPLVKQRNEQLERSAAA 687

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
           AS  A I  LY +++ EA++L ++ A L+  + +   +++  A   ++ ++  F+     
Sbjct: 688 ASALAIISKLYNKLQSEAENLAQKEAKLRRLQEEATNKKVAHANASLEEILLKFQESAHQ 747

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP-----------QFGEQVH 677
            + ++    ++++++AI A+VE H      S++ +N +S T            + G++V 
Sbjct: 748 KAKEDEGFSMRDAQAAIIAVVEEHATKPVASIT-SNPASITEPEGKEGEGEQLRVGDEVI 806

Query: 678 VKSLGDKLATVVEVP-GDDDTVLVQYGKMRVRVKKNNIRP-IPNSKRKNAANPAPRLRKQ 735
           +K LG   AT+V++P  ++D + VQ G M++RVK N I   +  S +  A  P     KQ
Sbjct: 807 IKRLGKLPATIVDIPQAENDYLTVQVGTMKMRVKLNEILSRVARSAKGGARTPTENKMKQ 866


>gi|302758310|ref|XP_002962578.1| hypothetical protein SELMODRAFT_141299 [Selaginella moellendorffii]
 gi|300169439|gb|EFJ36041.1| hypothetical protein SELMODRAFT_141299 [Selaginella moellendorffii]
          Length = 825

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 307/742 (41%), Positives = 439/742 (59%), Gaps = 46/742 (6%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
           MG A  + + +P GK+ E+S+ L +QT+ A  +  +  L     +D+  ++ +A+SG+  
Sbjct: 28  MGVAAARGSNLPVGKNREDSEGLQDQTADAHKLAGT--LRFLGAKDVTKVVEAAISGEFC 85

Query: 61  SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRY--SPLLELLKNCNFLTELEEKIGF 118
              E+C+V+ TL     +  +L  A    G  L+R   SPL  +++     +EL E I  
Sbjct: 86  HVGELCSVKDTLECARRLHDQLF-AKGGGGLELERLELSPLQRIMQGLELCSELREDIDK 144

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
           C+D K  I+LDRAS  L  +R +R+ NM  L+SLLK+ A  +  AGGID   IT RR+R+
Sbjct: 145 CLDSKREIVLDRASTKLSQVRRQRQANMTELESLLKETARMVIDAGGIDSMTITTRRARL 204

Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
           CV ++ASHK+LLP G+ L+ S++GAT FMEP+ A+  NN+E++LS +E AEE AI   L 
Sbjct: 205 CVAVRASHKFLLPGGVVLDSSNTGATLFMEPEPALRLNNLEIQLSAAERAEEVAICRRLA 264

Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKH 297
           + +A S   I   ++ +  +DLA ARA  A+W+  V P    S+S       + IE I+H
Sbjct: 265 SRVAASAASILEQLNAITLVDLACARAKHAKWLGAVKPAFFESKSE---SKGVIIEEIRH 321

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS--DFPVPIDIKVECETRVVV 355
           PLLL ++L                            KG+   +FPVPIDIKV    ++V+
Sbjct: 322 PLLLETALE---------------------------KGLDRDNFPVPIDIKVRDGVKIVI 354

Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
           I+GPNTGGKT ++KTLG+AS+M+KAGLYLPA  +PRLPWFD I AD+GD QSLEQNLSTF
Sbjct: 355 ISGPNTGGKTVALKTLGIASIMAKAGLYLPASGNPRLPWFDRIFADVGDSQSLEQNLSTF 414

Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
           SGH+ R+  I E    +SLVLIDEIG GTDP+EG +LAT++L+Y    V L +VTTH A 
Sbjct: 415 SGHMRRLCKITEASGPQSLVLIDEIGGGTDPAEGSSLATAVLKYFAKTVHLCIVTTHSAS 474

Query: 476 LSCL--KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
           L  L   D+D  FENA+ EF LETLRPTYR+LWG  G SNALNIAKS+ FD  I+ RA  
Sbjct: 475 LKTLPIHDQDLPFENASVEFDLETLRPTYRVLWGLPGQSNALNIAKSLQFDSDILSRASY 534

Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
            + +L P   + R+S+L   LM++  + E  A TAA   ++I  L+ EI  E  DLD+R 
Sbjct: 535 WLTKLTPSGLKSRQSDLMLQLMKQSEEEEDHACTAAVYLSDIETLHNEIAFEVDDLDKRK 594

Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
              K +E   + + +  AK +++ V+  ++  L + S       ++ ++ +I  IV  + 
Sbjct: 595 IAAKRQELASMSKHVTEAKNKMEAVISRYKEGLSNNSGGGKAFTLRTAQDSITTIVNDY- 653

Query: 654 PDDDFSVSETNTSSF--TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
               F   +  ++S+   P  GE+V ++ LG K ATV+E   D   ++VQ G M++RVK 
Sbjct: 654 --GAFFKEQNPSNSYLPLPGVGERVIIRRLGKKPATVLEPADDSGHLMVQLGTMKMRVKT 711

Query: 712 NNIR-PIPNSKRKNAANPAPRL 732
             +      S  K A  PAP L
Sbjct: 712 TELMLTAQGSPVKQAKKPAPFL 733


>gi|302824584|ref|XP_002993934.1| hypothetical protein SELMODRAFT_236869 [Selaginella moellendorffii]
 gi|300138206|gb|EFJ04981.1| hypothetical protein SELMODRAFT_236869 [Selaginella moellendorffii]
          Length = 825

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 306/742 (41%), Positives = 440/742 (59%), Gaps = 46/742 (6%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
           MG A  + + +P GK+ E+S+ L +QT+ A  +  +  L     +D+  ++ +A+SG+  
Sbjct: 28  MGVAAARGSNLPVGKNREDSEGLQDQTADAHKLAGT--LRFLGAKDVTKVVEAAISGEFC 85

Query: 61  SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRY--SPLLELLKNCNFLTELEEKIGF 118
           +  E+C+V+ TL     +  +L  A    G  L+R   SPL  +++     +EL E I  
Sbjct: 86  NVGELCSVKDTLECARRLHDQLF-AKGGGGLELERLELSPLQRIMQGLELCSELREDIDK 144

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
           C+D K  I+LDRAS  L  +R +R+ NM  LD LLK+ A  +  AGGID   IT RR+R+
Sbjct: 145 CLDSKREIVLDRASTKLSQVRRQRQANMTELDILLKETARMVIDAGGIDSMTITTRRARL 204

Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
           CV ++ASHK+LLP G+ L+ S++GAT FMEP+ A+  NN+E++LS +E AEE AI   L 
Sbjct: 205 CVAVRASHKFLLPGGVVLDSSNTGATLFMEPEPALRLNNLEIQLSAAERAEEVAICRRLA 264

Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKH 297
           + +A S   I   ++ ++ +DLA ARA  A+W+  V P    S+S       + IE I+H
Sbjct: 265 SRVAASAASILEQLNAIMLLDLACARAKHAKWLGAVKPAFFESKSE---SKGVIIEEIRH 321

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS--DFPVPIDIKVECETRVVV 355
           PLLL ++L                            KG+   +FPVPIDIKV    ++V+
Sbjct: 322 PLLLETALE---------------------------KGLDRDNFPVPIDIKVRDGVKIVI 354

Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
           I+GPNTGGKT ++KTLG+AS+M+KAGLYLPA  +PRLPWFD I AD+GD QSLEQNLSTF
Sbjct: 355 ISGPNTGGKTVALKTLGIASIMAKAGLYLPASGNPRLPWFDRIFADVGDSQSLEQNLSTF 414

Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
           SGH+ R+  I E    +SLVLIDEIG GTDP+EG +LAT++L+Y    V L +VTTH A 
Sbjct: 415 SGHMRRLCKITEASGPQSLVLIDEIGGGTDPAEGSSLATAVLKYFAKTVHLCIVTTHSAS 474

Query: 476 LSCL--KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
           L  L   D+D  FENA+ EF LETLRPTYR+LWG  G SNA+NIAKS+ FD  I+ RA  
Sbjct: 475 LKTLPIHDQDLPFENASVEFDLETLRPTYRVLWGLPGQSNAVNIAKSLQFDSDILSRASY 534

Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
            + +L P   + R+S+L   LM++  + E  A TAA   ++I  L+ EI  E  DLD+R 
Sbjct: 535 WLTKLTPSGLKSRQSDLMLQLMKQSEEEEDHACTAAVYLSDIETLHNEIAFEVDDLDKRK 594

Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
              K +E   + + +  AK +++ V+  ++  L + S       ++ ++ +I  IV  + 
Sbjct: 595 IAAKRQELASMSKHVTEAKNKMEAVISRYKEGLSNNSGGGKAFTLRTAQDSITTIVNDY- 653

Query: 654 PDDDFSVSETNTSSF--TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
               F   +  ++S+   P  GE+V ++ LG K ATV+E   D   ++VQ G M++RVK 
Sbjct: 654 --GAFFKEQNPSNSYLPLPGVGERVIIRRLGKKPATVLEPADDSGHLMVQLGTMKMRVKT 711

Query: 712 NNIR-PIPNSKRKNAANPAPRL 732
             +      S  K A  PAP L
Sbjct: 712 TELMLTAQGSPVKQAKKPAPFL 733


>gi|115461374|ref|NP_001054287.1| Os04g0680700 [Oryza sativa Japonica Group]
 gi|113565858|dbj|BAF16201.1| Os04g0680700 [Oryza sativa Japonica Group]
          Length = 497

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/412 (49%), Positives = 287/412 (69%), Gaps = 23/412 (5%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G A   + ++P G+S EES++LL QT+AA  +      D   +ED++  + +A   +LL+
Sbjct: 97  GRAACGEGRVPVGRSREESERLLEQTAAAALLPAPL--DFGGVEDVSAAIAAAAGARLLA 154

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
             EIC V R++RA   V+ +L   +E   D  + Y+PLL+++++C+FLTEL ++I FC+D
Sbjct: 155 VREICGVGRSIRAARRVFDQLKTLSEETPDG-RSYTPLLDIMQDCDFLTELVQRIEFCLD 213

Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
             L ++LDRAS+ L  IR ER++N++ L+SLL+  + +IFQ GGID P++TKRRSRMCVG
Sbjct: 214 YTLSVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVG 273

Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
           +KASHK+L+P GI L+ S SGATYFMEP+ A+  NNMEV+LS  E AEE AIL LLT+ I
Sbjct: 274 VKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSI 333

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
           A SE +I++LM ++LE+DLA AR  +A W++ V P  +     +Q + + + S+ IEGI+
Sbjct: 334 ADSEMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQ 393

Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG--ISDFPVPIDIKVECETRVV 354
           HPLLL  SL  +              E++ +  G LS    +S  P+P+D++V  +TR++
Sbjct: 394 HPLLLEQSLSMVK-------------ESTRVGKGQLSDEHLVSPMPIPLDMQVRNDTRII 440

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
           VI+GPNTGGKTA+MKTLGLASLMSKAG++ PAK  PRLPWFD +LADIGDHQ
Sbjct: 441 VISGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQ 492


>gi|440751890|ref|ZP_20931093.1| mutS2 family protein [Microcystis aeruginosa TAIHU98]
 gi|440176383|gb|ELP55656.1| mutS2 family protein [Microcystis aeruginosa TAIHU98]
          Length = 789

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 263/733 (35%), Positives = 390/733 (53%), Gaps = 80/733 (10%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+P  +S EES  LL QT    ++ Q     L    I DI   L  A  G LLS  E+  
Sbjct: 34  QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  TL  V  + + + E  ++         P+L EL+       E+E++I  CID    I
Sbjct: 94  IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144

Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
             DRAS  L  IR +    R+R    L  +++K      Q G I + +IT+R  R  + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           KA+ K  +P GI  + SS+GAT+++EP   V+  N   +    E  EE  IL  L+  IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           ++  +++YL+     +DLA ARA ++ W++G  P       +    +I +  ++HPLL  
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                           K   +  E+             VPI++++  E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTG 343

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++KTLGLA+LM+KAGL++PA+    +PWFD +LADIGD QSLEQ+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLEQSLSTFSGHIRRI 403

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V IL  ++  SLVL+DE+G+GTDP+EG  LA +ILQYL D   L V TTHY +L  LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
           D+RFENA+ EF   TL PTYR+LWG  G SNAL IA+ +G   +I+  A+  +  L  E 
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEI 523

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            Q     +   L  +RR+ ES+A+ A+ L  +    Y E+   A  L  R   LK  + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578

Query: 603 QVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
           ++Q+ L  AK +I+ V++  +      RDA         +++   + AI E   P     
Sbjct: 579 EIQKALLSAKAEINDVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK---- 625

Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
            +E    ++ PQ GE+V + +LG + A V+ +  + D + +++G M++ +  + I  +  
Sbjct: 626 -TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDG 683

Query: 720 SKRKNAANPAPRL 732
            K + A  PA  L
Sbjct: 684 QKVETAPKPAKNL 696


>gi|166365089|ref|YP_001657362.1| recombination and DNA strand exchange inhibitor protein
           [Microcystis aeruginosa NIES-843]
 gi|166087462|dbj|BAG02170.1| DNA mismatch repair protein [Microcystis aeruginosa NIES-843]
          Length = 789

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 262/733 (35%), Positives = 390/733 (53%), Gaps = 80/733 (10%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+P  +S EES  LL QT    ++ Q     L    I DI   L  A  G LLS  E+  
Sbjct: 34  QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  TL  V  + + + E  ++         P+L EL+       E+E++I  CID    I
Sbjct: 94  IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144

Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
             DRAS  L  IR +    R+R    L  +++K      Q G I + +IT+R  R  + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSDRWVIPV 197

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           KA+ K  +P GI  + SS+GAT+++EP   V+  N   +    E  EE  IL  L+  IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNTIA 256

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           ++  +++YL+     +DLA ARA ++ W++G  P       +    +I +  ++HPLL  
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                           K   +  E+             VPI++++  E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTG 343

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++KTLGLA+LM+KAGL++PA+    +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDHVLADIGDEQSLQQSLSTFSGHIRRI 403

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V IL  ++  SLVL+DE+G+GTDP+EG  LA +ILQYL D   L V TTHY +L  LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
           D+RFENA+ EF   TL PTYR+LWG  G SNAL IA+ +G   +I+  A+  +  L  E 
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            Q     +   L  +RR+ ES+A+ A+ L  +    Y E+   A  L  R   LK  + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578

Query: 603 QVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
           ++Q+ L  AK +I+ V++  +      RDA         +++   + AI E   P     
Sbjct: 579 EIQKALLSAKAEINEVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK---- 625

Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
            +E    ++ PQ GE+V + +LG + A V+ +  + D + +++G M++ +  + I  +  
Sbjct: 626 -TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDG 683

Query: 720 SKRKNAANPAPRL 732
            K + A  PA  L
Sbjct: 684 QKVETAPKPAKNL 696


>gi|425460157|ref|ZP_18839639.1| MutS2 protein [Microcystis aeruginosa PCC 9808]
 gi|389827152|emb|CCI21729.1| MutS2 protein [Microcystis aeruginosa PCC 9808]
          Length = 789

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 263/733 (35%), Positives = 390/733 (53%), Gaps = 80/733 (10%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+P  +S EES  LL QT    ++ Q     L    I DI   L  A  G LLS  E+  
Sbjct: 34  QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  TL  V  + + + E  ++         P+L EL+       E+E++I  CID    I
Sbjct: 94  IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144

Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
             DRAS  L  IR +    R+R    L  +++K      Q G I + +IT+R  R  + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           KAS K  +P GI  + SS+GAT+++EP   V+  N   +    E  EE  IL  L+  IA
Sbjct: 198 KASQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           ++  +++YL+     +DLA ARA ++ W++G  P       +    +I +  ++HPLL  
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                           K   +  E+             VPI++++  E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQITPEIRVVAITGPNTG 343

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++KTLGLA+LM+KAGL++PA+    +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V IL  ++  SLVL+DE+G+GTDP+EG  LA +ILQYL D   L V TTHY +L  LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
           D+RFENA+ EF   TL PTYR+LWG  G SNAL IA+ +G   +I+  A+  +  L  E 
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            Q     +   L  +RR+ ES+A+ A+ L  +    Y E+   A  L  R   LK  + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578

Query: 603 QVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
           ++Q+ L  AK +I+ V++  +      RDA         +++   + AI E   P     
Sbjct: 579 EIQKALLSAKAEINDVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK---- 625

Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
            +E    ++ PQ GE+V + +LG + A V+ +  + D + +++G M++ +  + I  +  
Sbjct: 626 -TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDG 683

Query: 720 SKRKNAANPAPRL 732
            K + A  PA  L
Sbjct: 684 QKVETAPKPAKNL 696


>gi|425465434|ref|ZP_18844743.1| MutS2 protein [Microcystis aeruginosa PCC 9809]
 gi|389832333|emb|CCI24146.1| MutS2 protein [Microcystis aeruginosa PCC 9809]
          Length = 789

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 261/729 (35%), Positives = 389/729 (53%), Gaps = 72/729 (9%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+P  +S EES  LL QT    ++ Q     L    I DI   L  A  G LLS  E+  
Sbjct: 34  QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  TL  V  + + + E  ++         P+L EL+       E+E++I  CID    I
Sbjct: 94  IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
             DRAS  L  IR + K   E +   L+ +  +  Q G I + +IT+R  R  + +KA+ 
Sbjct: 145 S-DRASPQLREIRGQMKVIKERIYRKLQDIMQK--QGGAIQEAVITQRSDRWVIPVKAAQ 201

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           K  +P GI  + SS+GAT+++EP   V+  N   +    E  EE  IL  L+  IA++  
Sbjct: 202 KEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNTIAEAFE 260

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           +++YL+     +DLA ARA ++ W++G  P       +    +I +  ++HPLL      
Sbjct: 261 DLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWWQ--- 312

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                       K   +  E+             VPI++++  E RVV ITGPNTGGKT 
Sbjct: 313 ------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTGGKTV 347

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KTLGLA+LM+KAGL++PA+    +PWFD +LADIGD QSL+Q+LSTFSGHI RIV IL
Sbjct: 348 TLKTLGLAALMAKAGLFIPAREPVEIPWFDHVLADIGDEQSLQQSLSTFSGHIRRIVRIL 407

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
             ++  SLVL+DE+G+GTDP+EG  LA +ILQYL D   L V TTHY +L  LK +D+RF
Sbjct: 408 AALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYRDSRF 467

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
           ENA+ EF   TL PTYR+LWG  G SNAL IA+ +G   +I+  A+  +  L  E  Q  
Sbjct: 468 ENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEINQ-- 525

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
              +   L  +RR+ ES+A+ A+ L  +    Y E+   A  L  R   LK  + Q++Q+
Sbjct: 526 ---VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQEIQK 582

Query: 607 ELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
            L  AK +I+ V++  +      RDA         +++   + AI E   P      +E 
Sbjct: 583 ALLSAKAEINEVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK-----TEK 628

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
              ++ PQ GE+V + +LG + A V+ +  + D + +++G M++ +  + I  +   K +
Sbjct: 629 TKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDGQKVE 687

Query: 724 NAANPAPRL 732
            A  PA  L
Sbjct: 688 TAPKPAKNL 696


>gi|425450195|ref|ZP_18830027.1| MutS2 protein [Microcystis aeruginosa PCC 7941]
 gi|389769051|emb|CCI05979.1| MutS2 protein [Microcystis aeruginosa PCC 7941]
          Length = 789

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 261/733 (35%), Positives = 390/733 (53%), Gaps = 80/733 (10%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+P  +S EES  LL QT    ++ Q     L    I DI   L  A  G LLS  E+  
Sbjct: 34  QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  TL  V  + + + E  ++         P+L EL+       E+E++I  CID    I
Sbjct: 94  IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144

Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
             DRAS  L  IR +    R+R    L  +++K      Q G I + +IT+R  R  + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSDRWVIPV 197

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           KA+ K  +P GI  + SS+GAT+++EP   V+  N   +    E  EE  IL  L+  IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNLIA 256

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           ++  +++YL+     +DLA ARA ++ W++G  P       +    +I +  ++HPLL  
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                           K   +  E+             +PI++++  E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------IPINVQISPEIRVVAITGPNTG 343

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++KTLGLA+LM+KAGL++PA+    +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V IL  ++  SLVL+DE+G+GTDP+EG  LA +ILQYL D   L V TTHY +L  LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
           D+RFENA+ EF   TL PTYR+LWG  G SNAL IA+ +G   +I+  A+  +  L  E 
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEI 523

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            Q     +   L  +RR+ ES+A+ A+ L  +    Y E+   A  L  R   LK  + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578

Query: 603 QVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
           ++Q+ L  AK +I+ V++  +      RDA         +++   + AI E   P     
Sbjct: 579 EIQKALLSAKAEINDVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK---- 625

Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
            +E    ++ PQ GE+V + +LG + A V+ +  + D + +++G M++ +  + I  +  
Sbjct: 626 -TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDG 683

Query: 720 SKRKNAANPAPRL 732
            K + A  PA  L
Sbjct: 684 QKVETAPKPAKNL 696


>gi|425446466|ref|ZP_18826469.1| MutS2 protein [Microcystis aeruginosa PCC 9443]
 gi|389733282|emb|CCI02921.1| MutS2 protein [Microcystis aeruginosa PCC 9443]
          Length = 789

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 259/730 (35%), Positives = 389/730 (53%), Gaps = 74/730 (10%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+P  +S EES  LL QT    ++ Q     L    I DI   L  A  G LLS  E+  
Sbjct: 34  QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  TL  V  + + + E  ++         P+L EL+       E+E++I  CID    I
Sbjct: 94  IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144

Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
             DRAS  L  IR +    R+R    L  +++K      Q G I + +IT+R  R  + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSDRWVIPV 197

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           KA+ K  +P GI  + SS+GAT+++EP   V+  N   +    E  EE  IL  L+  IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNLIA 256

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           ++  +++YL+     +DLA ARA ++ W++G  P       +    +I +  ++HPLL  
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                           K   +  E+             VPI++++  E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQITPEIRVVAITGPNTG 343

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++KTLGLA+LM+KAGL++PA+    +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V IL  ++  SLVL+DE+G+GTDP+EG  LA +ILQYL D   L V TTHY +L  LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
           D+RFENA+ EF   TL PTYR+LWG  G SNAL IA+ +G   +I+  A+  +  L  E 
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            Q     +   L  +RR+ ES+A+ A+ L  +    Y E+   A  L  R   LK  + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
           ++Q+ L  AK +I+ V++  +      S  +     +++   + AI E   P      +E
Sbjct: 579 EIQKALLSAKAEINDVIRRLQ------SGTKTGRDAQKATEELTAIAERLLPK-----TE 627

Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
               ++ PQ GE+V + +LG + A V+ +  + + + +++G M++ +  + I  +   K 
Sbjct: 628 KTKVNYRPQVGERVRLPNLG-QTAEVLAISPESEEISLRFGMMKMTLPLDQIESLDGQKV 686

Query: 723 KNAANPAPRL 732
           + A  PA  L
Sbjct: 687 ETAPKPAKNL 696


>gi|422303606|ref|ZP_16390957.1| MutS2 protein [Microcystis aeruginosa PCC 9806]
 gi|389791362|emb|CCI12788.1| MutS2 protein [Microcystis aeruginosa PCC 9806]
          Length = 789

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 260/729 (35%), Positives = 390/729 (53%), Gaps = 72/729 (9%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+P  +S EES  LL QT    ++ Q     L    I DI   L  A  G LLS  E+  
Sbjct: 34  QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  TL  V  + + + E  ++         P+L EL+       E+E++I  CID    I
Sbjct: 94  IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
             DRAS  L  IR + K   E +   L+ +  +  Q G I + +IT+R  R  + +KA+ 
Sbjct: 145 S-DRASPQLREIRGQMKVIKERIYRKLQDIMQK--QGGAIQEAVITQRSDRWVIPVKAAQ 201

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           K  +P GI  + SS+GAT+++EP   V+  N   +    E  EE  IL  L+  IA++  
Sbjct: 202 KEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNTIAEAFE 260

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           +++YL+     +DLA ARA ++ W++G  P       +    +I +  ++HPLL      
Sbjct: 261 DLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWWQ--- 312

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                       K   +  E+             VPI++++  E RVV ITGPNTGGKT 
Sbjct: 313 ------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTGGKTV 347

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KTLGLA++M+KAGL++PA+    +PWFD +LADIGD QSL+Q+LSTFSGHI RIV IL
Sbjct: 348 TLKTLGLAAVMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRIL 407

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
             ++  SLVL+DE+G+GTDP+EG  LA +ILQYL D   L V TTHY +L  LK +D+RF
Sbjct: 408 AALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYRDSRF 467

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
           ENA+ EF   TL PTYR+LWG  G SNAL IA+ +G + +I+  A+  +  L  E  Q  
Sbjct: 468 ENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLNPEIVTEARNHLGGLSEEINQ-- 525

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
              +   L  +RR+ ES+A+ A+ L  +    Y E+   A  L  R   LK  + Q++Q+
Sbjct: 526 ---VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQEIQK 582

Query: 607 ELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
            L  AK +I+ V++  +      RDA         +++   + AI E   P      +E 
Sbjct: 583 ALLSAKAEINEVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK-----TEK 628

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
              ++ PQ GE+V + +LG + A V+ +  + D + +++G M++ +  + I  +   K +
Sbjct: 629 TKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDGQKVE 687

Query: 724 NAANPAPRL 732
            A  PA  L
Sbjct: 688 TAPKPAKNL 696


>gi|425456967|ref|ZP_18836673.1| MutS2 protein [Microcystis aeruginosa PCC 9807]
 gi|389801826|emb|CCI19076.1| MutS2 protein [Microcystis aeruginosa PCC 9807]
          Length = 789

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 259/730 (35%), Positives = 389/730 (53%), Gaps = 74/730 (10%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+P  +S EES  LL QT    ++ Q     L    I DI   L  A  G LLS  E+  
Sbjct: 34  QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  TL  V  + + + E  ++         P+L EL+       E+E++I  CID    I
Sbjct: 94  IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144

Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
             DRAS  L  IR +    R+R    L  +++K      Q G I + +IT+R  R  + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           KA+ K  +P GI  + SS+GAT+++EP   V+  N   +    E  EE  IL  L+  IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNLIA 256

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           ++  +++YL+     +DLA ARA ++ W++G  P       +    +I +  ++HPLL  
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                           K   +  E+             VPI++++  E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQITPEIRVVAITGPNTG 343

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++KTLGLA+LM+KAGL++PA+    +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V IL  ++  SLVL+DE+G+GTDP+EG  LA +ILQYL D   L V TTHY +L  LK +
Sbjct: 404 VRILGALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
           D+RFENA+ EF   TL PTYR+LWG  G SNAL IA+ +G   +I+  A+  +  L  E 
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            Q     +   L  +RR+ ES+A+ A+ L  +    Y E+   A  L  R   LK  + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
           ++Q+ L  AK +I+ V++  +      S  +     +++   + AI E   P      +E
Sbjct: 579 EIQKALLSAKAEINDVIRRLQ------SGTKTGRDAQKATEELTAIAERLLPK-----TE 627

Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
               ++ PQ GE+V + +LG + A V+ +  + + + +++G M++ +  + I  +   K 
Sbjct: 628 KTKVNYRPQVGERVRLPNLG-QTAEVLAISPESEEISLRFGMMKMTLPLDQIESLDGQKV 686

Query: 723 KNAANPAPRL 732
           + A  PA  L
Sbjct: 687 ETAPKPAKNL 696


>gi|425434478|ref|ZP_18814947.1| MutS2 protein [Microcystis aeruginosa PCC 9432]
 gi|389676022|emb|CCH94894.1| MutS2 protein [Microcystis aeruginosa PCC 9432]
          Length = 789

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 257/730 (35%), Positives = 388/730 (53%), Gaps = 74/730 (10%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+P  +S EES  LL QT    ++ Q     L    I DI   L     G LLS  E+  
Sbjct: 34  QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERGHLGGLLSGQELLN 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  TL  V  + + + E  ++         P+L EL+       E+E++I  CID    I
Sbjct: 94  IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144

Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
             DRAS  L  IR +    R+R    L  +++K      Q G I + +IT+R  R  + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           KAS K  +P GI  + SS+GAT+++EP   ++  N   +    E  EE  IL  L+  IA
Sbjct: 198 KASQKEQIP-GIIHDTSSTGATFYIEPHSIIDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           ++  +++YL+     +DLA ARA ++ W++G  P       +    +I +  ++HPLL  
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                           K   +  E+             +PI++++  E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------IPINVQISPEIRVVAITGPNTG 343

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++KTLGLA+LM+KAGL++PA+    +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V IL  ++  SLVL+DE+G+GTDP+EG  LA +ILQYL D   L V TTHY +L  LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
           D+RFENA+ EF   TL PTYR+LWG  G SNAL IA+ +G   +I+  A+  +  L  E 
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEI 523

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            Q     +   L  +RR+ ES+A+ A+ L  +    Y E+   A  L  R   LK  + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
           ++Q+ L  AK +I+ V++  +      +  +     +++   + AI E   P      +E
Sbjct: 579 EIQKALLSAKAEINEVIRRLQ------AGTKTGKDAQKATEELTAIAERLLPK-----TE 627

Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
               ++ PQ GE+V + +LG + A V+ +  + D + +++G M++ +  + I  +   K 
Sbjct: 628 KTKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDGQKV 686

Query: 723 KNAANPAPRL 732
           + A  PA  L
Sbjct: 687 ETAPKPAKNL 696


>gi|443646823|ref|ZP_21129501.1| mutS2 family protein [Microcystis aeruginosa DIANCHI905]
 gi|159028850|emb|CAO90655.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
 gi|443335652|gb|ELS50116.1| mutS2 family protein [Microcystis aeruginosa DIANCHI905]
          Length = 789

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 260/729 (35%), Positives = 390/729 (53%), Gaps = 72/729 (9%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+P  +S EES  LL QT    ++ Q     L    I DI   L  A  G LLS  E+  
Sbjct: 34  QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  TL  V  + + + E  ++         P+L EL+       E+E++I  CID    I
Sbjct: 94  IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
             DRAS  L  IR + K   E +   L+ +  +  Q G I + +IT+R  R  + +KA+ 
Sbjct: 145 S-DRASPQLREIRGQIKVIKERIYRKLQDIMQK--QGGAIQEAVITQRSERWVIPVKAAQ 201

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           K  +P GI  + SS+GAT+++EP   V+  N   +    E  EE  IL  L+  IA++  
Sbjct: 202 KEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNLIAEAFE 260

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           +++YL+     +DLA ARA ++ W++G  P       +    +I +  ++HPLL      
Sbjct: 261 DLEYLLAIATRLDLATARARYSLWLEGNPP-----RFIDGSETITLRNLRHPLLWWQ--- 312

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                       K   +  E+             +PI++++  E RVV ITGPNTGGKT 
Sbjct: 313 ------------KHHEQGGEV-------------IPINVQITPEIRVVAITGPNTGGKTV 347

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KTLGLA+LM+KAGL++PA+    +PWFD +LADIGD QSL+Q+LSTFSGHI RIV IL
Sbjct: 348 TLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRIL 407

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
             ++  SLVL+DE+G+GTDP+EG  LA +ILQYL D   L V TTHY +L  LK +D+RF
Sbjct: 408 AALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYQDSRF 467

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
           ENA+ EF   TL PTYR+LWG  G SNAL IA+ +G + +I+  A+  +  L  E  Q  
Sbjct: 468 ENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLNPEIVAEARNHLGGLSEEINQ-- 525

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
              +   L  +RR+ ES+A+ A+ L  +    Y E+   A  L  R   LK  + Q++Q+
Sbjct: 526 ---VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQEIQK 582

Query: 607 ELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
            L  AK +I+ V++  +      RDA         +++   + AI E   P      +E 
Sbjct: 583 ALLSAKAEINDVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK-----TEK 628

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
              ++ PQ GE+V + +LG + A V+ +  + D + +++G M++ +  + I  +   K +
Sbjct: 629 TKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDGQKVE 687

Query: 724 NAANPAPRL 732
            A  PA  L
Sbjct: 688 TAPKPAKNL 696


>gi|390440129|ref|ZP_10228481.1| MutS2 protein [Microcystis sp. T1-4]
 gi|389836495|emb|CCI32605.1| MutS2 protein [Microcystis sp. T1-4]
          Length = 789

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 258/730 (35%), Positives = 390/730 (53%), Gaps = 74/730 (10%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+P  +S EES  LL QT    ++ Q     L    I DI   L  A  G LLS  E+  
Sbjct: 34  QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  TL  V  + + + E  ++         P+L EL+       E+E++I  CID    I
Sbjct: 94  IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144

Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
             DRAS  L  IR +    R+R    L  +++K      Q G I + +IT+R  R  + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVLPV 197

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           KA+ K  +P GI  + SS+GAT+++EP   V+  N   +    E  EE  IL  L+  IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           ++  +++YL+     +DLA ARA ++ W++G  P       +    +I +  ++HPLL  
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                           K   +  E+             VPI++++  E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTG 343

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++KTLGLA+LM+KAGL++PA+    +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V IL  ++  SLVL+DE+G+GTDP+EG  LA +ILQYL D   L V TTHY +L  LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYQ 463

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
           D+RFENA+ EF   TL PTYR+LWG  G SNAL IA+ +G + +I+  A+  +  L  E 
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLNPEIVAEARNHLGGLSEEI 523

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            Q     +   L  +RR+ ES+A+ A+ L  +    Y E+   A  L  R   LK  + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
           ++Q+ L  AK +I+ V++  +      +  +     +++   + AI E   P      +E
Sbjct: 579 EIQKALLSAKAEINEVIRRLQ------AGTKTGKDAQKATEELTAIAERLLPK-----TE 627

Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
               ++ PQ GE+V + +LG + A V+ +  + + + +++G M++ +  + I  +   K 
Sbjct: 628 KTKVNYRPQVGERVRLPNLG-QTAEVLAISPESEEISLRFGMMKMTLPLDQIESLDGQKV 686

Query: 723 KNAANPAPRL 732
           + A  PA  L
Sbjct: 687 ETAPKPAKNL 696


>gi|425439812|ref|ZP_18820127.1| MutS2 protein [Microcystis aeruginosa PCC 9717]
 gi|389719875|emb|CCH96352.1| MutS2 protein [Microcystis aeruginosa PCC 9717]
          Length = 789

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 261/733 (35%), Positives = 390/733 (53%), Gaps = 80/733 (10%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+P  +S EES  LL QT    ++ Q     L    I DI   L  A  G LLS  E+  
Sbjct: 34  QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  TL  V  + + + E  ++         P+L EL+       E+E++I  CID    I
Sbjct: 94  IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144

Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
             DRAS  L  IR +    R+R    L  +++K      Q G I + +IT+R  R  + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSDRWVIPV 197

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           KA+ K  +P GI  + SS+GAT+++EP   V+  N   +    E  EE  IL  L+  IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           ++  +++YL+     +DLA ARA ++ W++G  P       +    +I +  ++HPLL  
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                           K   +  E+             VPI++++  E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQITPEIRVVAITGPNTG 343

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++KTLGLA+LM+KAGL++PA+    +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V IL  ++  SLVL+DE+G+GTDP+EG  LA +ILQYL D   L V TTHY +L  LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
           D+RFENA+ EF   TL PTYR+LWG  G SNAL IA+ +G   +I+  A+  +  L  E 
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            Q     +   L  +RR+ ES+A+ A+ L  +    Y E+   A  L  R   LK  + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578

Query: 603 QVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
           ++Q+ L  AK +I+ V++  +      RDA         +++   + AI E   P     
Sbjct: 579 EIQKALLSAKAEINEVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK---- 625

Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
            +E    ++ PQ GE+V + +LG + A V+ +  + + + +++G M++ +  + I  +  
Sbjct: 626 -TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPESEEISLRFGMMKMTLPLDQIESLDG 683

Query: 720 SKRKNAANPAPRL 732
            K + A  PA  L
Sbjct: 684 QKVETAPKPAKNL 696


>gi|359461621|ref|ZP_09250184.1| recombination and DNA strand exchange inhibitor protein
           [Acaryochloris sp. CCMEE 5410]
          Length = 794

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 253/726 (34%), Positives = 401/726 (55%), Gaps = 68/726 (9%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQ---LLSPSEIC 66
           ++P   ++E S+ LL QT     + ++Q L   T E I  I  + V  Q   +LS  E+ 
Sbjct: 34  ELPIPTTVEGSETLLQQTQEVYDL-ETQLLTALTFEGIHDIRAALVRSQRQGILSGEELL 92

Query: 67  AVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI 126
            V  TL    N+ + +    EL          L +L+ +     ELE++I  CID +  +
Sbjct: 93  QVATTLLGSRNLRRLINRYPEL--------VSLNQLVADLRTYPELEQEIRHCIDEQGEV 144

Query: 127 ILDRASEDLELIRAERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
             DRASE L +IR ER+R + N + ++L+++  +  +   + + LIT+R  R  V +KA 
Sbjct: 145 A-DRASEKLMVIR-ERQRQVRNDVQTILQRILQR--KGAALQERLITQRSDRFVVPVKAP 200

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
            K  +P GI  + S+SGAT ++EPK  VE NN   +L+  E AE  AI   LT ++A+ +
Sbjct: 201 QKDAVP-GIVHDASTSGATLYIEPKATVELNNRLRQLTRQEQAEAEAIRQALTEKVAEVQ 259

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
            ++  L+  V  +DLA ARA ++ W+    P   +++      ++ +  ++HPLL+    
Sbjct: 260 EDLDALLQIVTAVDLATARARYSYWLGANRPQFVNRAA----ETLTLRRLRHPLLVWQ-- 313

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                        +   +  E+             V ID+ ++ E RVV ITGPNTGGKT
Sbjct: 314 -------------QHHEQGPEV-------------VAIDVTIQPEIRVVAITGPNTGGKT 347

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KTLGLA+LM+K GL++PA+    LPWFD +LADIGD QSL+Q+LSTFSGHI RI +I
Sbjct: 348 VTLKTLGLATLMAKVGLFVPAQEPVELPWFDQVLADIGDEQSLQQSLSTFSGHIRRIQEI 407

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           +  ++ +SLVL+DE+G+GTDP EG ALA ++L+YL D+  L + TTH+ +L  LK  D R
Sbjct: 408 IAALTDQSLVLLDEVGAGTDPLEGSALAIALLRYLADQAQLTIATTHFGELKALKYTDAR 467

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
           FENA+ EF   TL+PTYR+LWG  G SNAL IA+ +G + ++I  AQ L +    + +  
Sbjct: 468 FENASVEFDDATLQPTYRLLWGIPGRSNALIIAQRLGLNEQVI--AQALAQM---DGETD 522

Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
             +++   L  ERR+ E++A+ AA L      L++++  +A DL  R   L+ ++ + +Q
Sbjct: 523 DVNQVIAGLETERRQQETRAQAAAKLLQSTEQLHQQVAKKASDLKVREQKLRQQQEKAIQ 582

Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 665
           +E+  AK  I  V++D + Q + A A ++ +   E    IA    + R            
Sbjct: 583 EEIRRAKQAIAQVIRDLQQQPKSAPAAQVAT---ERLEKIA----SQRLPSRTKPKAPPP 635

Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
           + F PQ G++V + S+G K   +   P ++  ++VQ+G M++ VK   +  +   K    
Sbjct: 636 TGFQPQVGDRVRIPSIGQKADVIKITPTNE--LVVQFGMMKMTVKPTEVESLTGEK---- 689

Query: 726 ANPAPR 731
             P P+
Sbjct: 690 VTPPPK 695


>gi|425469689|ref|ZP_18848604.1| MutS2 protein [Microcystis aeruginosa PCC 9701]
 gi|389880428|emb|CCI38809.1| MutS2 protein [Microcystis aeruginosa PCC 9701]
          Length = 789

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 258/733 (35%), Positives = 389/733 (53%), Gaps = 80/733 (10%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+P  +S EES  LL QT    ++ Q     L    I DI   L  A  G LLS  E+  
Sbjct: 34  QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  TL  V  + + + E  ++         P+L EL+       E+E++I  CID    I
Sbjct: 94  IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144

Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
             DRAS  L  IR +    R+R    L  +++K      Q G I + +IT+R  R  + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           KA+ K  +P GI  + SS+GAT+++EP   ++  N   +    E  EE  IL  L+  IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIIDQGNQLRQYRRLEQIEEEKILRQLSNTIA 256

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           ++  +++YL+     +DLA ARA ++ W++G  P       +    +I +  ++HPLL  
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                           K   +  E+             +PI++++  E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------IPINVQITPEIRVVAITGPNTG 343

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++KTLGLA+LM+KAGL++PA+    +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V IL  ++  SLVL+DE+G+GTDP+EG  LA +ILQYL D   L V TTHY +L  LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
           D+RFENA+ EF   TL PTYR+LWG  G SNAL IA+ +G   +I+  A+  +  L  E 
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEI 523

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            Q     +   L  +RR+ ES+A+ A+ L  +    Y E+   A  L  R   LK  + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578

Query: 603 QVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
           ++Q+ L  AK +I+ V++  +      RDA         +++   + AI E   P     
Sbjct: 579 EIQKALLSAKAEINEVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK---- 625

Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
            +E    ++ PQ GE+V + +LG + A V+ +  + + + +++G M++ +  + I  +  
Sbjct: 626 -TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPESEEISLRFGMMKMTLPLDQIESLDG 683

Query: 720 SKRKNAANPAPRL 732
            K +    PA  L
Sbjct: 684 QKVETVPKPAKNL 696


>gi|428223909|ref|YP_007108006.1| MutS2 family protein [Geitlerinema sp. PCC 7407]
 gi|427983810|gb|AFY64954.1| MutS2 family protein [Geitlerinema sp. PCC 7407]
          Length = 791

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 254/702 (36%), Positives = 383/702 (54%), Gaps = 61/702 (8%)

Query: 16  SLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
           SLEESQ+LL QT     L   Q+  L    I DI   L  A    +LS  E+ A+  TL 
Sbjct: 40  SLEESQRLLAQTEEVYRLESRQTSGLPFDGIMDIGPSLERAERQGVLSGEELLAIATTLA 99

Query: 74  AVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
              N+ + + + A++         P+L EL+       E+E+ I FCID +  + +DRAS
Sbjct: 100 GARNLRRVIDDQADM---------PVLTELVSELRTYPEIEQSIHFCIDDRGEV-MDRAS 149

Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
             L  IR +++   E +   L ++  +  QA  + + +IT+R  R  + +KASHK  +P 
Sbjct: 150 PKLAEIREKQRSQREEVRQTLFRIMQRQSQA--MQESVITQRGDRFVIPVKASHKDAIP- 206

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           GI  + S+SGAT ++EP   VE NN   +L   E AEE  IL  LTAEIA+    ++ L+
Sbjct: 207 GIVHDTSTSGATLYVEPHTVVERNNRLRQLQRQEQAEEAVILGRLTAEIAEVLPTLERLL 266

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
             V  +DLA ARA ++ W+ G  P    ++       + +  ++HPLL+        +A 
Sbjct: 267 AIVTTLDLAAARARYSFWLGGNVPRFVQRT---AGEVVTLRSLRHPLLVWQQQHEQGSAV 323

Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
                                       VPID+ ++ + RVV ITGPNTGGKT ++KTLG
Sbjct: 324 ----------------------------VPIDLMIQPQLRVVAITGPNTGGKTVTLKTLG 355

Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
           LA+LM+KAGLY+ A+    +PWFD ILADIGD QSL+Q+LSTFSGHI RIV IL+ V+ +
Sbjct: 356 LAALMAKAGLYVAAREPVEIPWFDQILADIGDEQSLQQSLSTFSGHIRRIVRILDRVTPD 415

Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
           SLVL+DE+G+GTDP+EG ALA ++LQ L D   L V TTH+ +L  LK +D RFENA+ E
Sbjct: 416 SLVLLDEVGAGTDPTEGSALAIALLQTLADAAQLTVATTHFGELKALKYQDDRFENASVE 475

Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
           F   +L PTYR+LWG  G SNAL IA+ +G    ++ +AQ+ V     E      +++  
Sbjct: 476 FDDVSLSPTYRLLWGIPGRSNALTIARRLGLSDSVVAQAQQRVGGSASE----EVNQVIA 531

Query: 553 SLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAK 612
            L  +RR+ E +A  AA +  +   L+ E+  +A  L +R   L+ ++ + VQ+ +  A+
Sbjct: 532 GLEAQRRRQEDKATEAAKILVQAEQLHAEVARKAGLLKQREQALQQEQERAVQEAIAQAR 591

Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
            +I  V++  +   R  +A       +++   + AI     P      +      F PQ 
Sbjct: 592 REIAQVIKQLQ---RGPTAQG----AQQATQNLNAIATRQLPSQ--QAAPKPKPGFQPQV 642

Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
           G++V +  LG + A V+  P +D  + V++G M++ V   ++
Sbjct: 643 GDRVRIPRLG-QTAEVLTAPDEDGEMTVRFGLMKMTVALEDV 683


>gi|158336591|ref|YP_001517765.1| recombination and DNA strand exchange inhibitor protein
           [Acaryochloris marina MBIC11017]
 gi|158306832|gb|ABW28449.1| MutS2 family protein [Acaryochloris marina MBIC11017]
          Length = 794

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 247/718 (34%), Positives = 398/718 (55%), Gaps = 68/718 (9%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQ---LLSPSEIC 66
           ++P   ++E S+ LL QT     + ++Q L   T E I  I  + V  Q   +L   E+ 
Sbjct: 34  ELPIPDTVEASETLLQQTQEVYDL-ETQLLTALTFEGIHDIRAALVRSQRQGILRGEELL 92

Query: 67  AVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI 126
            V  TL    N+ + +    EL        + L +L+ +     ELE++I  CID +  +
Sbjct: 93  QVATTLLGSRNLRRLINRYPEL--------TSLNQLVADLRTYPELEQEIRHCIDEQGEV 144

Query: 127 ILDRASEDLELIRAERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
             DRASE L  IR ER+R + N + ++L+++  +  +   + + LIT+R +R  V +KA 
Sbjct: 145 A-DRASEKLMGIR-ERQRQVRNDVQTILQRILQR--KGAALQERLITQRSNRFVVPVKAP 200

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
            K  +P GI  + S+SGAT ++EPK  VE NN   +L+  E AE  AI   LT ++A+  
Sbjct: 201 QKDAVP-GIVHDASTSGATLYIEPKATVELNNRLRQLTRQEQAEAEAIRQALTEKVAEVH 259

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
            ++  L+  V  +DLA ARA ++ W++   P   +++      ++ +  ++HPLL+    
Sbjct: 260 EDLDALLQIVTLVDLATARARYSYWLEANRPRFVNRAA----DTLTLRRLRHPLLVWQ-- 313

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                        +   +  E+             V ID+ ++ + RVV ITGPNTGGKT
Sbjct: 314 -------------QQHEQGPEV-------------VAIDVTIQPQIRVVAITGPNTGGKT 347

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KTLGLA+LM+K GL++PA+    LPWFD +LADIGD QSL+Q+LSTFSGHI RI +I
Sbjct: 348 VTLKTLGLATLMAKVGLFVPAQEPVELPWFDQVLADIGDEQSLQQSLSTFSGHIRRIQEI 407

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           +  ++ +SLVL+DE+G+GTDP EG ALA ++L+YL D+  L + TTH+ +L  LK  D R
Sbjct: 408 IAALTDQSLVLLDEVGAGTDPLEGSALAIALLRYLADQAQLTIATTHFGELKALKYTDNR 467

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
           FENA+ EF   TL+PTYR+LWG  G SNAL IA+ +G + ++I +AQ  +     + +  
Sbjct: 468 FENASVEFDDATLQPTYRLLWGIPGRSNALIIAQRLGLNEQVIAQAQAQM-----DGETD 522

Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
             +++   L  ERR+ E++A+ AA L      L+ ++  +A DL  R   L+ ++ + +Q
Sbjct: 523 DVNQVIAGLETERRQQETKAQAAAQLLQSTEQLHEQVAKKASDLKVREQKLRQQQEKAIQ 582

Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINS--LIKESESAIAAIVEAHRPDDDFSVSET 663
           +E+  AK  I  V++D + Q + A A ++ +  L K +   + +  +   P         
Sbjct: 583 EEIRRAKQAIAQVIRDLQQQPKSAPAAQVATERLEKIANQRLPSRTKPKAPP-------- 634

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
               F PQ G++V + S+G K   +   P ++  ++V++G M++ VK   I  +   K
Sbjct: 635 -PKGFQPQVGDRVRIPSIGQKADVIKITPTNE--LVVKFGMMKMTVKPTEIESLTGEK 689


>gi|170079175|ref|YP_001735813.1| recombination and DNA strand exchange inhibitor protein
           [Synechococcus sp. PCC 7002]
 gi|169886844|gb|ACB00558.1| DNA mismatch repair protein [Synechococcus sp. PCC 7002]
          Length = 799

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 254/728 (34%), Positives = 395/728 (54%), Gaps = 68/728 (9%)

Query: 13  FGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
           F +S  +S+ LL QT    AL       +    I DI+  L  A  G L++  ++  +  
Sbjct: 39  FPQSQADSEILLAQTVEMQALDGAVDNGVSFEGIGDISDALERATVGGLIAGKDLLLIAT 98

Query: 71  TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
           TL  V  + ++L E AEL+       S L  L++      ELE+ I  CID +   + DR
Sbjct: 99  TLAGVRRL-RRLVENAELE------LSQLTRLVEQVRTYPELEQDIHHCIDDRG-DVTDR 150

Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           AS  LE IR + K   E +   L+++  +   +G I + +IT+R  R  + +KA  K  +
Sbjct: 151 ASPKLEGIRVKIKGAREQIYQTLQRIMQR--HSGSIQEAVITQRGDRFVLPVKAGQKEQI 208

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
           P GI  ++SS+G+T ++EPKG VE  N   +    E  E   +L  LT ++A+   +++ 
Sbjct: 209 P-GIVHDISSTGSTLYIEPKGIVELGNRLRQAVKQEEREIEIVLRQLTEKVAEVVEDLEK 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
           L+     +DLA  RA ++ W+DG  P       ++ D    +  ++HPLL+    +    
Sbjct: 268 LLAIATTLDLAMTRARYSLWLDGHPP-----KFIAPDQPTILRQLRHPLLVWQEKQE--- 319

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                       E+ E+             +PI++++  E RVV ITGPNTGGKT ++KT
Sbjct: 320 ------------ESLEV-------------IPINVQIRPEIRVVAITGPNTGGKTVTLKT 354

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LG+A+LM+K GL++PA     +PWFD +LADIGD QSL+Q+LSTFSGHI R+  I+E + 
Sbjct: 355 LGMAALMAKVGLFIPAIAPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRVGRIIEALD 414

Query: 431 RES---LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
           +ES   LVL+DE+G+GTDP+EG ALA ++L+YL D+  L V TTHY +L  LK +D RFE
Sbjct: 415 QESQNNLVLLDEVGAGTDPTEGSALAIALLKYLADQTQLTVATTHYGELKALKYEDERFE 474

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NA+ EF   +LRPTY++LWG  G SNAL IA+ +G D +I++ AQ L+            
Sbjct: 475 NASVEFDEYSLRPTYKLLWGIPGRSNALAIAQRLGLDAEIVETAQDLLGNTNT-----NV 529

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
           +E+  +L  +RR+ E +A+ A +L  +    Y E+  +A DL RR A LK  + QQVQ  
Sbjct: 530 NEVIAALEAQRREQEQKAKEAEALLKQTERFYTEVSSKAADLQRREAELKLAQDQQVQAA 589

Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
           +  AK +I  V++  +     A   ++ +   E+   IAA           S  +     
Sbjct: 590 IAEAKAEIAQVIRTLQKGQPTAQKAQVAT---EALGDIAA--------SKMSQPKRKKPG 638

Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
           + PQ GE++ +  LG + A V+E+  D+ T++ ++G M++ +    I  +   K +  A 
Sbjct: 639 YQPQLGEKIRISKLG-QTAEVIELDPDNKTLVARFGVMKMSLDWTEIESLQGQKVE--AE 695

Query: 728 PAPRLRKQ 735
           P P+  K+
Sbjct: 696 PKPKTPKK 703


>gi|254425115|ref|ZP_05038833.1| MutS2 family protein [Synechococcus sp. PCC 7335]
 gi|196192604|gb|EDX87568.1| MutS2 family protein [Synechococcus sp. PCC 7335]
          Length = 798

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 252/752 (33%), Positives = 396/752 (52%), Gaps = 86/752 (11%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQL 59
           +G+   Q+  IP  ++  ES+ LL+QT+ A  +   S  L    I DI   L  +    +
Sbjct: 27  IGNVAAQRLLIPISQA--ESEALLSQTTEATQLESTSAGLQFGGIRDIGVALERSRLQGI 84

Query: 60  LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGF 118
           LS  E+  +  TL     + +++    +L         P+L+ L+++     ELE++I  
Sbjct: 85  LSGDELLDIATTLAGARRLRRQIDAQEDL---------PVLQALVEDLRTFPELEQEIHR 135

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
           CID +  +  DRAS  L  +R + K   + + S L+++  +  Q G + + LIT+R  R 
Sbjct: 136 CIDDRGQVA-DRASTKLGNVRQQLKVIRDRIYSKLQRIIQR--QGGALQEALITQRNDRF 192

Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
            + +KA+ K  +P GI  +VS+SG+T ++EP   V+  N    L   E  E  AI  +LT
Sbjct: 193 VLPVKAAQKDAVP-GIVHDVSTSGSTLYVEPHSIVDNGNKRRALRKEEEVESEAIRQMLT 251

Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
            ++A++  ++++LM  ++++DLA ARA +  WM+G  P   +Q  ++         + HP
Sbjct: 252 YQVAEAFPDLEHLMITIVKLDLAAARARYGLWMEGNAPRFVNQEQITLRQ------LTHP 305

Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
           LLL                                K   D  VP D+ +  E RVV ITG
Sbjct: 306 LLLWQQ----------------------------EKEQKDKVVPTDLVMRPELRVVAITG 337

Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
           PNTGGKT ++KTLGL +LM+K G+++PAK    LPWFD +LADIGD QS+EQ+LSTFSGH
Sbjct: 338 PNTGGKTVTLKTLGLTALMAKVGMFIPAKEPVELPWFDSVLADIGDEQSIEQSLSTFSGH 397

Query: 419 ISRIVDILELVSR--------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVT 470
           + RI  IL+ +           SLVL+DE+G+GTDPSEG ALA ++L++L +   L V T
Sbjct: 398 VKRIGRILDTIDELKGENEVANSLVLLDEVGAGTDPSEGSALAIALLKHLANNTRLTVAT 457

Query: 471 THYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQR 530
           THY +L  LK +D RFENA+ EF  E L PTYR+LWG  G SNAL+IA+ +G    ++++
Sbjct: 458 THYGELKSLKYEDERFENASVEFDDEKLAPTYRLLWGIPGRSNALSIARRLGLKHSVLEQ 517

Query: 531 AQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
           A+  +            + + + L  +R+K E +A  A  L A     Y+E+E  A+ L 
Sbjct: 518 AKAQMGGT-----NDNVNTVIEGLEAQRQKQEKRAAEAEKLVARAEKFYKEVEARAQSLR 572

Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE-----NQLRDASADEINSLIKESESAI 645
            R   LK ++ + V+  L  A+ ++  V++D +      Q    + +E+N          
Sbjct: 573 DREQKLKRQQEKSVETSLLHARAEVAKVIRDLQKGGLTGQDAQRATEELNR--------- 623

Query: 646 AAIVEAHRPDDDFSVS-ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
             I E   P  D     ++  + + P+  E+V + SLG+++A V+E   DD  V V++G 
Sbjct: 624 --IEEKRLPTGDHPAKVKSADTGYRPKVSERVRLASLGNQVAEVIEEADDDGKVAVRFGL 681

Query: 705 MRVRVKKNNIRPIPNSK-----RKNAANPAPR 731
           M++ V  ++I  +   K     RK  A P P+
Sbjct: 682 MKMTVDLSDIESLKGEKAEPIERKPKAQPVPK 713


>gi|427417145|ref|ZP_18907328.1| MutS2 family protein [Leptolyngbya sp. PCC 7375]
 gi|425759858|gb|EKV00711.1| MutS2 family protein [Leptolyngbya sp. PCC 7375]
          Length = 818

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 252/755 (33%), Positives = 390/755 (51%), Gaps = 76/755 (10%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
           +G    +  +IP  +S  ES++LL QT  A  + +  PL+   +ED+   L  A    +L
Sbjct: 27  LGALAARHGRIPEHQS--ESEQLLAQTREAYRLEEKSPLNFRGVEDMGDALERAKRQAIL 84

Query: 61  SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
           S  E+  +  TL     + + +      D    + +  L  L+       ELE++I  CI
Sbjct: 85  SGDELLHIATTLAGARQLRRTI------DAQEEEAFPVLQALVGQLRTYPELEKEIHHCI 138

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
           D +  +  DRA+  L  IR   K   + L + L+++  +   +G + + LIT+R  R  +
Sbjct: 139 DDRGKVT-DRANPKLAGIRKNLKNTHDQLHAKLQRIMQR--HSGVLQETLITQRAGRFVI 195

Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
            +KA  K  +P GI  +VS+SGAT ++EP+G VEF N   +L   E  EE  +   LT +
Sbjct: 196 PVKAPQKESIP-GIVHDVSTSGATLYIEPQGVVEFGNRLRQLERQETREEELVRQRLTEQ 254

Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
           +A    +++ LM  V  +DLA ARA ++ W++   P  S  +  +      +  ++HP+L
Sbjct: 255 VAAVSEDLEQLMAIVTTLDLATARARYSLWLEANPPRFSEANERTV-----LRQLRHPIL 309

Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
           +               P          TV           VP DI +  + RVV ITGPN
Sbjct: 310 VWQQ-------RHEEGP----------TV-----------VPTDITMRPDIRVVAITGPN 341

Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
           TGGKT ++KTLGLA+LM+K GL++PA+    LPWFD +LADIGD QS+EQ+LSTFSGHI 
Sbjct: 342 TGGKTVTLKTLGLAALMAKVGLFVPAREPVELPWFDQVLADIGDEQSIEQSLSTFSGHIR 401

Query: 421 RIVDILELVSRE------------------SLVLIDEIGSGTDPSEGVALATSILQYLRD 462
           RI  IL+ +  +                  SLVL+DE+G+GTDP+EG ALA S+LQ+L +
Sbjct: 402 RIGRILDAIGADGVDDAGNTASMGTAHPTNSLVLLDEVGAGTDPTEGSALAISLLQHLAN 461

Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
              L V TTH+ +L  LK +D RFENA+ EF   +L PTYR+LWG  G SNAL IA+ +G
Sbjct: 462 HTRLTVATTHFGELKALKYQDERFENASVEFDDVSLSPTYRLLWGIPGRSNALTIARRLG 521

Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
            +  +I  AQ  V       +Q   +++   L  +R++ E QA+ AA + A+   L  +I
Sbjct: 522 LNPNVIDTAQTYVG----VSKQDDVNQVIAGLEAQRKRQEDQAKQAAGIVAQAEALKTDI 577

Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
           E +A  +       K ++ + +Q  +  AK +I TV++  +     A A +  + + E  
Sbjct: 578 ERKAAAIKEWERSQKLEQEKAIQAAVAEAKAEIATVIRQLQKGNPTAQAAQRATELVEDI 637

Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
           +    + + + P      ++   + + P+ GE+V +  LG + A VV  P  D  V V++
Sbjct: 638 AQQQQVPKGNHP------AKKVITDYKPKLGEKVRLIGLGGQTAEVVGEPDSDGKVAVRF 691

Query: 703 GKMRVRVKKNNIRPIPNSK---RKNAANPAPRLRK 734
           G M+  V  ++I  +   K    K AA  AP  R+
Sbjct: 692 GLMKTIVDLSDIESLTGQKTATSKPAAEKAPEKRR 726


>gi|434396858|ref|YP_007130862.1| MutS2 protein [Stanieria cyanosphaera PCC 7437]
 gi|428267955|gb|AFZ33896.1| MutS2 protein [Stanieria cyanosphaera PCC 7437]
          Length = 799

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 246/734 (33%), Positives = 392/734 (53%), Gaps = 72/734 (9%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
           +G    +  Q+P  K+  ES +LL QT    ++ Q          IEDI   L  A  G 
Sbjct: 27  LGTVAARGLQLPTTKT--ESLQLLAQTKEVYSLEQQLDSSWSFKGIEDIGESLERAKIGG 84

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           LLS  E+  +  TL  V  + + +    E           L +L+       ELE++I  
Sbjct: 85  LLSAQELLDLATTLAGVRRLRRTIDAKTE-------DLPTLTQLVTELRTYPELEQEIHH 137

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
           CID +  +  DRA+  L  IR++ KR  + +  +L+ +  +  Q G + + +IT+R  R 
Sbjct: 138 CIDDRGEVT-DRANPKLAEIRSQIKRLRDKIYKILQNIVQK--QGGAVQEAVITQRDGRF 194

Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
            + +KA  K  +P GI  ++SS+G+T ++EP   V+  N   +    E  EE A+L  LT
Sbjct: 195 VIPVKAPQKDSIP-GIVHDISSTGSTLYVEPNAVVQLGNQLRQAERQEKREEEAVLRALT 253

Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
            ++A  + +++ L+     +DLA ARA ++ W+    P       V+   ++ +  ++HP
Sbjct: 254 EKVAAVQEDLEQLLAIATVLDLATARARYSWWLGANPPRFVD---VNQGETVTLRQLRHP 310

Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
           LL+                 +   + +E+             VPID++++ + RVV ITG
Sbjct: 311 LLVWQ---------------QQHEQGTEV-------------VPIDVQIQPQIRVVAITG 342

Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
           PNTGGKT ++KT+GLA+LM+KAGL++PAK    +PWF+ +LADIGD QSL+Q+LSTFSGH
Sbjct: 343 PNTGGKTVTLKTIGLAALMAKAGLFIPAKEPVEIPWFEQVLADIGDEQSLQQSLSTFSGH 402

Query: 419 ISRIVDILELVS-RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
           I RI  I+E  S ++SL+L DEIG+GTDP+EG ALA +IL+YL ++  L + TTHY +L 
Sbjct: 403 IRRISRIIETSSLQDSLILFDEIGAGTDPAEGSALAIAILKYLAEKALLTIATTHYGELK 462

Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
            LK +D RFENA+ EF+ +TL+PTYR+LWG  G SNAL IA  +G   +II+ AQ+    
Sbjct: 463 ALKYQDERFENASVEFNDQTLKPTYRLLWGIPGRSNALTIAHRLGLKSEIIEDAQQ---- 518

Query: 538 LRPERQQHRKSELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
            R      ++  L  S +E ERR+ E++A+ A  L  +    Y E+  +A  L  R   L
Sbjct: 519 -RVGVSASQELNLVISALEAERREQENKAKEATKLLEQTERFYTEVSAKASSLQEREREL 577

Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFEN-----QLRDASADEINSLIKESESAIAAIVEA 651
           K  + + VQQ +  AK +I  V++  +      Q    + +E+N +   +E  +A   + 
Sbjct: 578 KISQEKAVQQAILAAKGEIAQVIRRLQQGEQTAQKAQKATEELNQI---AERELAKTKQP 634

Query: 652 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
            R              + P+ GE++ + SLG +   V+ +  ++  + V++G M++ V  
Sbjct: 635 KR----------TKPGYKPKVGERIKIPSLG-QTGEVLSIDEEEKQLTVRFGLMKMTVAV 683

Query: 712 NNIRPIPNSKRKNA 725
           + I  +   K + A
Sbjct: 684 DEIESLDGQKVETA 697


>gi|126657853|ref|ZP_01729006.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
           sp. CCY0110]
 gi|126620793|gb|EAZ91509.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
           sp. CCY0110]
          Length = 818

 Score =  367 bits (943), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 245/732 (33%), Positives = 384/732 (52%), Gaps = 90/732 (12%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQPLDLS--TIEDIAGILNSAVSGQLLSPSEICAV 68
           +P   SLEES++LL QT     + Q+  +  +   I D+   L  A     LS  E+  +
Sbjct: 35  LPIPTSLEESKELLEQTKEIYRLEQNLEIKWTFEGITDVGDSLKRATLKGNLSGKELLNI 94

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
             TL  +  + + + +  EL          L EL+ +     ELE+ I  CID +   + 
Sbjct: 95  ATTLAGMRRLRRIIEDYEEL--------PTLTELVADIRTYPELEKTIHHCID-EAGKVA 145

Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
           DRAS  L  IR   K N + +   L+ +  Q  + G I + +IT+R  R  + +KA+ K 
Sbjct: 146 DRASTKLGEIRHNLKENRDRIYQKLQNIMQQ--KGGAIQETVITQRGDRFVLPVKAAQKE 203

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P GI  + S +G T+++EP   V+  N   +    E  EE AIL  L+ ++A+   ++
Sbjct: 204 QIP-GIIHDTSGTGGTFYIEPNSVVQMGNKRRQYLRQEEREEEAILRQLSEQVAEVAEDL 262

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           +YL+     +DLA AR+ ++ W+ G  P       +    +I +  + HPLL+       
Sbjct: 263 EYLLAIATILDLATARSRYSFWLGGNAP-----RFIEDKETITLRQLHHPLLV------W 311

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                  +P+                      VPI++++  E RV+ ITGPNTGGKT ++
Sbjct: 312 QERHEQGSPV----------------------VPINVQINPEIRVIAITGPNTGGKTVTL 349

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GLA+LM+K GL++PAK    LPWF  ILADIGD QS+EQNLSTFSGHI RIV ILE 
Sbjct: 350 KTVGLAALMAKVGLFVPAKEPVELPWFKQILADIGDEQSIEQNLSTFSGHIRRIVRILEA 409

Query: 429 V-----SRE---------------------SLVLIDEIGSGTDPSEGVALATSILQYLRD 462
           +     SRE                     SL+L+DE+G+GTDP+EG ALA ++L +L D
Sbjct: 410 LDQGTESREQEAGIRDQGSVLSETPHTPHPSLILLDEVGAGTDPAEGSALAIALLHHLAD 469

Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
              L + TTHY +L  LK +D+RFENA+ EF   +L PTYR+LWG  G SNAL+IA+ +G
Sbjct: 470 HARLTIATTHYGELKALKYEDSRFENASVEFDDRSLSPTYRLLWGIPGRSNALSIAQRLG 529

Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
            D +I++ A+  +  L  +      +++   L  +RR+ E +A  A  L  E    Y E+
Sbjct: 530 LDHEIVEEAKTRIGGLSQD-----VNDVIAGLEAQRREQEEKALEAQKLLQETEKFYTEV 584

Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
            ++A  L +R   LK  + Q+VQ+ +  AK +I  V+++ +   + +         +++ 
Sbjct: 585 TEKATALQQREQDLKRHQEQEVQKAIAEAKEEIAQVIRNLQQGKKSSQK------AQQAT 638

Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
            AI  I +   P          T S+ P+ GE++ + +LG + A V++V  +D+ V+V++
Sbjct: 639 EAITNIGQKQLPK-----KAKPTVSYQPKVGEKIRLSNLG-QTAEVLDVSPEDEEVMVRF 692

Query: 703 GKMRVRVKKNNI 714
           G M++ V   +I
Sbjct: 693 GLMKMTVSFRDI 704


>gi|428215373|ref|YP_007088517.1| MutS2 family protein [Oscillatoria acuminata PCC 6304]
 gi|428003754|gb|AFY84597.1| MutS2 family protein [Oscillatoria acuminata PCC 6304]
          Length = 846

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 253/719 (35%), Positives = 375/719 (52%), Gaps = 68/719 (9%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           QIP   +LE++  LL QT     +       L    I DI   L  A    +LS  E+ A
Sbjct: 74  QIP--DTLEQTLVLLAQTQEVYELENQGLTTLSFDGIHDIGDSLERADLHGILSAEELLA 131

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           +  TL     + + + +  +L        S L  L+ +     E+E++I  CID +  + 
Sbjct: 132 IATTLSGARQLRRTIDDHPQL--------SVLNRLVADLRTYPEIEQEIHRCIDDRAQVA 183

Query: 128 LDRASEDLELIRAERKRNM-----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
            DRAS  L  IR +R+R +     + L S+L++       +  + + LITKR  R  + +
Sbjct: 184 -DRASTRLGEIR-QRQRTVRDQIYQKLQSILQR------HSNAVQEQLITKRSDRFVIPV 235

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           K+  K  +P GI  + S SGAT ++EP   VE NN    L   E AEE AIL  LTA+I 
Sbjct: 236 KSPQKDAIP-GIVHDSSMSGATLYVEPHSVVELNNKARVLLREEKAEEEAILRALTAKIT 294

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           +   +++ L+  V  +DLA ARA ++ W++   P   ++       +I +  ++HPLL+ 
Sbjct: 295 EVVEDLERLLAIVTILDLATARARYSYWLNANPPTFINRGEEG--QTITLRQLRHPLLIW 352

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                   A                             VPID+ V+ + +VV ITGPNTG
Sbjct: 353 QQQHEQGNAV----------------------------VPIDLIVQPQIKVVAITGPNTG 384

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++KTLGL  LM+K GL++PAK    LPWFD +LADIGD QSLEQ+LSTFSGHI RI
Sbjct: 385 GKTVTLKTLGLGILMAKVGLFIPAKVPVELPWFDFVLADIGDEQSLEQSLSTFSGHIRRI 444

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
             IL   + +SLVL+DE+G+GTDP+EG ALA ++L +L D   L + TTHY +L  LK +
Sbjct: 445 SRILGSCTPDSLVLLDEVGAGTDPTEGSALAIALLHHLADCSQLTIATTHYGELKALKYE 504

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
           D RFENA+ EF   TL+PTYR+LWG  G SNAL IA+ +G   +I+ +A  LV    P  
Sbjct: 505 DDRFENASVEFDEATLQPTYRLLWGIPGRSNALTIARRLGLTSEIVDQAANLVA---PTG 561

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            Q     +   L  +R++ E++A+ A  L  E   LYRE+ D+AK L  R   L+  + Q
Sbjct: 562 TQD-VDRVIAGLENQRKQQETKAQEAGQLLGETERLYREVADKAKSLKERERQLQQSQEQ 620

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
            V + +  AK +I  V++    Q  + +  + N   ++    +  I E H P     V++
Sbjct: 621 AVAEAIAVAKQEIAQVIRRL--QQGNVTGQDANQATQD----LQGIAEKHLPSRQQKVAK 674

Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
                F P+ G++V +  +G +   V+ V   D  V V++G M++ +    I  +   K
Sbjct: 675 PK-PGFRPKAGDRVRIPQIG-QTGEVLAVGEGDLEVTVRFGLMKMTIGITEIESLDGQK 731


>gi|67923383|ref|ZP_00516863.1| MutS 2 protein [Crocosphaera watsonii WH 8501]
 gi|67854764|gb|EAM50043.1| MutS 2 protein [Crocosphaera watsonii WH 8501]
          Length = 806

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 245/728 (33%), Positives = 383/728 (52%), Gaps = 81/728 (11%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQPL--DLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           +P   SL +S++LL QT     + Q+  +      I D+   L  A    +LS  E+  +
Sbjct: 35  LPIPTSLADSKELLAQTQEIYGLEQNLEIRWTFEGITDVGDSLKRATLKGILSGKELLNI 94

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
             TL  +  + + + +  EL         P+L EL+ +     ELE+ I  CID +   +
Sbjct: 95  ATTLAGMRRLRRIIDDCEEL---------PVLKELVADIRTYPELEKAIHHCID-EAGKV 144

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG-IDKPLITKRRSRMCVGIKASH 186
            DRAS  LE IR   K   E  D + +K+   I Q GG I +P+IT+R  R  + +KA  
Sbjct: 145 TDRASPKLESIRHNLK---EVRDRIYQKLQNIIQQKGGAIQEPVITQRGDRFVIPVKAGQ 201

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           K  +P GI  + S +G T+++EP   V+  N   +    E  EE  IL  LT +IA+   
Sbjct: 202 KEQIP-GITHDTSGTGGTFYIEPNSVVQMGNKRRQYLRQEEREEETILRQLTEKIAEVAE 260

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           +++YL+   + +DLA ARA ++ W+    P       +    +I +  + HPLL+     
Sbjct: 261 DLEYLLAIAMVLDLATARARYSFWLGANPP-----RFIQDKETITLRQLHHPLLV----- 310

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                    +P+                      +PI+++++ + RV+ ITGPNTGGKT 
Sbjct: 311 -WQEKHEQGSPV----------------------IPINVQIKPDIRVIAITGPNTGGKTV 347

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KTLGLA+LM+K GL++PAK    +PWF+ ILADIGD QS+EQNLSTFSGHI RIV IL
Sbjct: 348 TLKTLGLAALMAKVGLFVPAKEPVEIPWFEKILADIGDEQSIEQNLSTFSGHIRRIVRIL 407

Query: 427 ELVSR-------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
           E + +              SL+L+DE+G+GTDP+EG ALA ++L  L D+  L + TTHY
Sbjct: 408 EALEQATLSPETLPHSPSPSLILLDEVGAGTDPAEGSALAMALLNRLADQARLTIATTHY 467

Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
            +L  LK +D+RFENA+ EF   T  PTYR+LWG  G SNAL+IA+ +G D  +I  A+ 
Sbjct: 468 GELKALKYEDSRFENASVEFDDRTFSPTYRLLWGIPGRSNALSIAQRLGLDVDVIDEAKT 527

Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
            +  L  +      +++   L  +RRK E +A+ A  L  +    Y E+  +A  L  R 
Sbjct: 528 RIGGLSQD-----VNDVIAGLEAQRRKQEEKAQEAQKLLQQTEKFYGEVTQKATALQERE 582

Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
             LK  +  +VQ+ +  AK +I  V+++ +        ++ +   +++  AI  I +   
Sbjct: 583 QDLKRYQELEVQKAIADAKEEIAKVIRNLQK------GNKSSQNAQKATEAINNISQRQL 636

Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
           P            S+ P+ GE++ + +LG + A V+EV  +D+ V+V++G M++ V   +
Sbjct: 637 PK-----KVKPKVSYQPKVGEKIRLSNLG-QTAEVLEVSAEDEEVMVRFGLMKMTVAFRD 690

Query: 714 IRPIPNSK 721
           I  +   K
Sbjct: 691 IESLDGQK 698


>gi|257061571|ref|YP_003139459.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
           sp. PCC 8802]
 gi|256591737|gb|ACV02624.1| MutS2 family protein [Cyanothece sp. PCC 8802]
          Length = 830

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 252/766 (32%), Positives = 394/766 (51%), Gaps = 113/766 (14%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLS--TIEDIAGILNSAVSGQ 58
           +G    QK  IP   ++EES++LL QT     + Q+  +  S   I DI   L  A  G 
Sbjct: 27  LGSLSAQKLSIP--TNIEESKQLLAQTQEIYRLEQNLDIKWSFDGINDIGDSLERAQLGG 84

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           +LS  E+  +  TL  V  + +++ E  E        +  L EL+++     E+E+ I  
Sbjct: 85  MLSGQELLNIATTLAGVRRL-RRIIENQE-------DFPILAELVEDVRTYPEIEQNIYH 136

Query: 119 CIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
           CID +   + DRAS  L  IR      R R ++ L +++++      Q G I +P+IT+R
Sbjct: 137 CID-EAGKVADRASVKLGEIRRHLKDIRDRIVQKLQNIIQR------QGGAIQEPVITQR 189

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R  + +KA  K  +P GI  + SS+GAT ++EP   VE+ N   +    E  EE AIL
Sbjct: 190 GDRFVIPVKAPQKDQIP-GIIHDSSSTGATLYIEPNSIVEWGNKRRQYLRQEQVEEEAIL 248

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS--INI 292
             L+AEIA+   ++ YL+     +DL  A+A ++ W++G  P       ++FD +  I +
Sbjct: 249 RKLSAEIAEVYDDLDYLLAIATILDLTTAKARYSLWLEGNAP-----RFINFDQTEPITL 303

Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
             ++HPLL+               P+                      VPI+++V+ + R
Sbjct: 304 RQLRHPLLV------WQQKHEQGVPV----------------------VPINVQVDPKIR 335

Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
           VV ITGPNTGGKT ++KT+GLA+LM+K GL++PAK    +PWF+ +LADIGD QS+EQ+L
Sbjct: 336 VVAITGPNTGGKTVTLKTIGLAALMAKVGLFIPAKEPVEIPWFEQVLADIGDEQSIEQSL 395

Query: 413 STFSGHISRIVDILELVSRE-------------------------------------SLV 435
           STFSGHI RIV I E +  +                                     +LV
Sbjct: 396 STFSGHIRRIVRITEGLGNQEDQGNRQQATGNSEDQGSSENIPPSPPPPLPPSPPPNTLV 455

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L+DE+G+GTDP+EG ALA ++L YL D   L + TTHY +L  LK +D+RFENA+ EF  
Sbjct: 456 LLDEVGAGTDPAEGSALAIALLNYLADHALLTIATTHYGELKALKYQDSRFENASVEFDD 515

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
           +TL PTYR+LWG  G SNAL IA+ +G + +I+Q A+  +     E  Q     +   L 
Sbjct: 516 QTLSPTYRLLWGIPGRSNALIIAQRLGLNLEIVQEAKTRIGGFSEEINQ-----VIAGLE 570

Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
            +RR+ E +A  A  L  +    Y E+ ++A  L +R   LK  + Q+VQ+ +  AK +I
Sbjct: 571 AQRREQEQKALEAKQLLQKTEKFYTEVSEKATSLQQREQELKRYQEQEVQKAIAQAKEEI 630

Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 675
             V++  +   + A         +++  A+  I +   P      +    +S+ P+ GE+
Sbjct: 631 AQVIRQLQQGSQTAQK------AQQATEALDQITQHQLPK-----TPKKQASYQPKVGER 679

Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           + + +LG + A V+E+  +   + V++G M++ V    I  +   K
Sbjct: 680 IRLSNLG-QTAEVLEIDEEAQALTVRFGLMKMTVALTEIESLDGKK 724


>gi|218248506|ref|YP_002373877.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
           sp. PCC 8801]
 gi|218168984|gb|ACK67721.1| MutS2 family protein [Cyanothece sp. PCC 8801]
          Length = 830

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 252/766 (32%), Positives = 394/766 (51%), Gaps = 113/766 (14%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLS--TIEDIAGILNSAVSGQ 58
           +G    QK  IP   ++EES++LL QT     + Q+  +  S   I DI   L  A  G 
Sbjct: 27  LGSLSAQKLSIP--TNIEESKQLLAQTQEIYRLEQNLDIKWSFDGINDIGDSLERAQLGG 84

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           +LS  E+  +  TL  V  + +++ E  E        +  L EL+++     E+E+ I  
Sbjct: 85  MLSGQELLNIATTLAGVRRL-RRIIENQE-------DFPILAELVEDVRTYPEIEQNIYH 136

Query: 119 CIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
           CID +   + DRAS  L  IR      R R ++ L +++++      Q G I +P+IT+R
Sbjct: 137 CID-EAGKVADRASVKLGEIRRHLKDIRDRIVQKLQNIIQR------QGGAIQEPVITQR 189

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R  + +KA  K  +P GI  + SS+GAT ++EP   VE+ N   +    E  EE AIL
Sbjct: 190 GDRFVIPVKAPQKDQIP-GIIHDSSSTGATLYIEPNSIVEWGNKRRQYLRQEQVEEEAIL 248

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS--INI 292
             L+AEIA+   ++ YL+     +DL  A+A ++ W++G  P       ++FD +  I +
Sbjct: 249 RKLSAEIAEVYDDLDYLLAIATILDLTTAKARYSLWLEGNAP-----RFINFDQTELITL 303

Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
             ++HPLL+               P+                      VPI+++V+ + R
Sbjct: 304 RQLRHPLLV------WQQKHEQGVPV----------------------VPINVQVDPKIR 335

Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
           VV ITGPNTGGKT ++KT+GLA+LM+K GL++PAK    +PWF+ +LADIGD QS+EQ+L
Sbjct: 336 VVAITGPNTGGKTVTLKTIGLAALMAKVGLFIPAKEPVEIPWFEQVLADIGDEQSIEQSL 395

Query: 413 STFSGHISRIVDILELVSRE-------------------------------------SLV 435
           STFSGHI RIV I E +  +                                     +LV
Sbjct: 396 STFSGHIRRIVRITEGLGNQEDQGNRQQATGNSEDQGSSENIPPSPPPPLPPSPPPNTLV 455

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L+DE+G+GTDP+EG ALA ++L YL D   L + TTHY +L  LK +D+RFENA+ EF  
Sbjct: 456 LLDEVGAGTDPAEGSALAIALLNYLADHALLTIATTHYGELKALKYQDSRFENASVEFDD 515

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
           +TL PTYR+LWG  G SNAL IA+ +G + +I+Q A+  +     E  Q     +   L 
Sbjct: 516 QTLSPTYRLLWGIPGRSNALIIAQRLGLNLEIVQEAKTRIGGFSEEINQ-----VIAGLE 570

Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
            +RR+ E +A  A  L  +    Y E+ ++A  L +R   LK  + Q+VQ+ +  AK +I
Sbjct: 571 AQRREQEQKALEAKQLLQKTEKFYTEVSEKATSLQQREQELKRYQEQEVQKAIAQAKEEI 630

Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 675
             V++  +   + A         +++  A+  I +   P      +    +S+ P+ GE+
Sbjct: 631 AQVIRQLQQGSQTAQK------AQQATEALDQITQHQLPK-----TPKKQASYQPKVGER 679

Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           + + +LG + A V+E+  +   + V++G M++ V    I  +   K
Sbjct: 680 IRLSNLG-QTAEVLEIDEEAQALTVRFGLMKMTVALTEIESLDGKK 724


>gi|443477184|ref|ZP_21067049.1| MutS2 family protein [Pseudanabaena biceps PCC 7429]
 gi|443017746|gb|ELS32124.1| MutS2 family protein [Pseudanabaena biceps PCC 7429]
          Length = 678

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 246/720 (34%), Positives = 389/720 (54%), Gaps = 74/720 (10%)

Query: 4   AVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSP 62
             +  A IP     EE+ +LL QT  A A+ +    + L  I++I   +  A    +LS 
Sbjct: 27  GAIAAAHIPIPDRYEETLELLTQTKEAYALEERNAGVSLDGIQNITEAVFRAEKQGILSA 86

Query: 63  SEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIGFCID 121
            E+ A+  TL    N+ ++L  A          Y P L++L  +     ++E++I  CID
Sbjct: 87  LELWAIATTLAGARNLRRQLDNAD---------YCPNLQILASDLRTYPDVEQEIYRCID 137

Query: 122 CKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
            +   +LDRASE L  IR E    R + M  L +++++       A  + + +IT+R  R
Sbjct: 138 -EGGNVLDRASERLGEIRHELTSVRDQIMTKLQNIMQR------NASSLQEQIITQRNDR 190

Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
             + +K+  +  +P G+  + SS+G T F+EP   V+ NN   +L   E A+   IL+ L
Sbjct: 191 YVLSVKSPQRDRVP-GVIHDTSSTGMTLFVEPNSIVQSNNRLRQLLKMEQAQIEIILTEL 249

Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
           +A+I +   +++ L+  V +IDLA ARA +A W+ G  P      H     +I +  ++H
Sbjct: 250 SAKITEIAEDLQRLLIIVTKIDLAVARARYAYWLGGNPP------HFLDQEAIVLRQLRH 303

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
           PLL+                 + + E  E+             VP+D+ +  +  VVVIT
Sbjct: 304 PLLVWQ---------------QKNEEGREV-------------VPVDVLISPQISVVVIT 335

Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
           GPNTGGKTA++KT GLA+LM+KAG+++PA+    +PWFDL+LADIGD QSL+QNLSTFSG
Sbjct: 336 GPNTGGKTATLKTFGLAALMAKAGMFIPAREPVEMPWFDLVLADIGDEQSLQQNLSTFSG 395

Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
           HI RI  ILE +S +SLVL+DE+G+GTDPSEG A+AT++L+YL D   LA+ TTH+ +L 
Sbjct: 396 HIRRIGRILEALSPQSLVLLDEVGAGTDPSEGSAIATALLEYLGDHTRLAIATTHFGELK 455

Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
            LK ++ +FENA+ EF   +L PTYR+LWG  G SNAL IA  +G  + I+  AQ     
Sbjct: 456 ALKYQNPKFENASVEFDDASLAPTYRLLWGIPGRSNALAIAGRLGLPQDILAAAQ----- 510

Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
           +R        +++   L  +RR+   +   AA L  E   L++EI D A+ +  +A  L+
Sbjct: 511 VRVGIGSAEMNDVIAELEAQRREQTQKTEAAAHLLVETERLHKEILDRAEMMRSQAKELR 570

Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
            ++ ++V   +  A+ ++  V++  + Q   A+ D     ++ +E  I  + + H P+  
Sbjct: 571 ERQEKEVNAAIAQAQKEVGRVIRKLQ-QGEQAATD-----VQHTERRIEELTKRHLPE-- 622

Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
                      T   G++V +   G K+A V+ VP       V+ G+M++ V  ++  PI
Sbjct: 623 ---MPPAKPKLTLNIGDRVRIPKFG-KIAQVLTVPNGAGDFSVRLGQMKLSVNLSDTEPI 678


>gi|443320530|ref|ZP_21049624.1| MutS2 family protein [Gloeocapsa sp. PCC 73106]
 gi|442789744|gb|ELR99383.1| MutS2 family protein [Gloeocapsa sp. PCC 73106]
          Length = 793

 Score =  361 bits (926), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 239/715 (33%), Positives = 387/715 (54%), Gaps = 71/715 (9%)

Query: 16  SLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDI-AGILNSAVSGQLLSPSEICAVRRTL 72
           +L  S++LL QT     + +  S       I+DI   +L + + G LL  +E+  +  T+
Sbjct: 40  NLATSRELLTQTQEIWQLQEHFSTAWSFQGIKDIRPFLLRAQLKGTLLG-TELLDIASTV 98

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
             V  + K + E +E         +P+LE L+       ELE++I +CID +   + DRA
Sbjct: 99  AGVRKLRKIIEEQSE---------TPVLENLVATVRTYPELEQEIYYCID-EGGEVEDRA 148

Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
           S  L  IR++ K     +  +L+ +  +  Q   + + LIT+R  R  + +K  HK  +P
Sbjct: 149 SLKLAEIRSKLKEFRNKIQKILQGIIQR--QGNALQETLITQRSDRFVLPVKTPHKEQIP 206

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
            GI  + SS+G+T ++EP+  ++  N   +L   E AE   +L  LT ++A    +++ +
Sbjct: 207 -GIVHDSSSTGSTLYVEPQAIIQLGNQLKQLLRREQAEIEIVLKALTEKVAAITSDLEQV 265

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
           +     +DLA ARA ++ W++   P L S   +  +++I +  +KHPLL+         A
Sbjct: 266 VLVATTLDLATARANYSYWLNAHPPQLIS---LDQEATITLRELKHPLLIWQEKHEQGPA 322

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
                                        VPI+++++ + RVV ITGPNTGGKT ++KT+
Sbjct: 323 V----------------------------VPINVRIQPDIRVVAITGPNTGGKTVTLKTI 354

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS- 430
           G+A+LM+K GL++PA +   +PWF+ ILADIGD QSLEQ+LSTFSGHI RI+ IL+ +  
Sbjct: 355 GIAALMAKVGLFIPAADPVEIPWFEKILADIGDEQSLEQSLSTFSGHIKRIIRILDAIGR 414

Query: 431 ----RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
               R +LVL+DE+G+GTDP+EG ALA ++LQ+L D   L + TTHY +L  LK +D+RF
Sbjct: 415 PEDLRSALVLLDEVGAGTDPTEGTALAIALLQHLADSAWLTIATTHYGELKALKYQDSRF 474

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
           ENA+ EF   TL PTYR+LWG  G SNAL IA+ +G D +I+++A+  V     E  Q  
Sbjct: 475 ENASVEFDEATLAPTYRLLWGIPGRSNALMIARRLGLDLEIVEQAKSKVGGYAEEINQ-- 532

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
              +   L  +R++ E++A+ A  L  E    Y EI  +AK L +R   LK  +TQ +Q+
Sbjct: 533 ---VIAGLEAQRKEQENKAQAANQLLQETERFYGEISAKAKALQQREQELKLAQTQAMQE 589

Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            L+ AK +I  V++  +        ++     +++   +  I      D+  +       
Sbjct: 590 ALSQAKAEIAQVIRTLQQ------GEQTAQNAQKARGNLETIA-----DNYLNTQAKPQR 638

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           ++ PQ GE++ + SLG + A V+  P     + V++G M++ V  ++I  +   K
Sbjct: 639 TYQPQVGEKIKIPSLG-QTAEVLTNPDAQGELTVRFGLMKMTVNLSDIESLDGKK 692


>gi|428200893|ref|YP_007079482.1| MutS2 family protein [Pleurocapsa sp. PCC 7327]
 gi|427978325|gb|AFY75925.1| MutS2 family protein [Pleurocapsa sp. PCC 7327]
          Length = 824

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 258/763 (33%), Positives = 395/763 (51%), Gaps = 113/763 (14%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLST------IEDIAGILNSA 54
           +G    +  +IP  K+  ES +LL QT     + Q    DL T      I DI   L  A
Sbjct: 27  VGAVAARNLEIPTTKT--ESLQLLAQTKEVYQLEQ----DLETGWSFDGIADIGESLERA 80

Query: 55  VSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEE 114
             G +LS  E+  +  TL  V  + + +        D+ +    L EL+       E+E+
Sbjct: 81  KLGGMLSGQELLDIATTLAGVRRLRRVI--------DNREDIPVLTELVAEIRTYPEIEQ 132

Query: 115 KIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI-FQAGGIDKPLITK 173
           +I  CID     + DRAS  L  IRA  K   E  DS+ +K+ + +  Q G + +P+IT+
Sbjct: 133 EIHRCID-DAGKVADRASPKLASIRARLK---EVRDSIYQKLQSILQRQGGAVQEPVITQ 188

Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
           R  R  + +KA  K  +P GI  + SS+GAT ++EP   V   N   +    E AEE AI
Sbjct: 189 RGDRFVIPVKAPQKDQIP-GIIHDTSSTGATLYIEPNAIVNLGNQLRQYRRQEQAEEEAI 247

Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS--IN 291
           L  LT  +A  E +++YL+     +DLA ARA ++ W++G  P       + F+    I 
Sbjct: 248 LRALTERVAAVESDLEYLLAVATILDLATARARYSLWLEGNAP-----RFIDFEEGEPIT 302

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
           +  ++HPLL+            + +   +DV                  VPI+++++ + 
Sbjct: 303 LRQLRHPLLVWQ----------HQHEQGADV------------------VPINVQIDPKI 334

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
           RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+    LPWF+ +LADIGD QS+EQ+
Sbjct: 335 RVVAITGPNTGGKTVALKTLGLAALMAKVGLFIPAREPVELPWFEQVLADIGDEQSIEQS 394

Query: 412 LSTFSGHI---------------------------------SRIVDILELVSRESLVLID 438
           LSTFSGHI                                 S  +  ++  + +SL+L+D
Sbjct: 395 LSTFSGHIRRIIRIIDTLKAEFSSSRVQKDPDDNRQAQEWDSEAIGKIQRTNNQSLILLD 454

Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
           E+G+GTDP+EG ALA ++L+YL D   L + TTHY +L  LK +D+RFENA+ EF   TL
Sbjct: 455 EVGAGTDPAEGSALAIALLKYLADNALLTIATTHYGELKALKYQDSRFENASVEFDDRTL 514

Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
            PTYR+LWG  G SNAL IA+ +G  ++I++ A+K V     E  Q         L  +R
Sbjct: 515 SPTYRLLWGIPGRSNALAIAQRLGLGQEIVEEARKRVGGYSEEINQ-----TIAGLEAQR 569

Query: 559 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 618
           R+ E +A+ A+ L  +    Y EI ++A  L  R   LK  + ++VQ+ +  AK +I  V
Sbjct: 570 REQELKAKEASQLLQQTERFYTEISEKAASLQERERELKQYQEREVQKAIAQAKAEIAKV 629

Query: 619 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHV 678
           ++    QL+  S    N+  +++  AI  I E   P       E ++S++ P+ GE++ +
Sbjct: 630 IR----QLQQGSPTAQNA--QKATEAIGQIAETRLPK-----PEKHSSNYLPKVGERIRL 678

Query: 679 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
            +LG + A V+ +   D+ V V++G M++ V    I  +   K
Sbjct: 679 PNLG-QTAEVLNLA--DEEVTVRFGLMKMTVPLTEIESLDGKK 718


>gi|186680652|ref|YP_001863848.1| recombination and DNA strand exchange inhibitor protein [Nostoc
           punctiforme PCC 73102]
 gi|186463104|gb|ACC78905.1| MutS2 family protein [Nostoc punctiforme PCC 73102]
          Length = 805

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 249/740 (33%), Positives = 388/740 (52%), Gaps = 82/740 (11%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
           +G    +  +IP   S  +S++LL QT     +    +  L    I+DI   L  A    
Sbjct: 27  LGATAARNLKIP--DSQTQSEQLLEQTKEVYQLESRLTTGLSFEGIQDIGDSLERAERSG 84

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           +L+  E+ A+  TL    ++ + +        D+ +    L EL+ +     ELE++I  
Sbjct: 85  VLAGDELLAIATTLAGARSLRRVI--------DNQEDLPILTELVADLRTYPELEQEIHR 136

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRRS 176
           CID +  +  DRAS+ L  IR + +R    L S + +    I QA  G + + LIT+R  
Sbjct: 137 CIDERAQVT-DRASQKLGEIRTDLRR----LRSQITQKLQNILQAKSGAVQEQLITQRSD 191

Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
           R  + +KA  K  +P GI  + S+SGAT ++EP   V   N   ++   E AEE AI  +
Sbjct: 192 RFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSVVPLGNQLRQIIRKEQAEEEAIRRI 250

Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
           LT ++A  + +++ L+     +DLA AR+ ++ W+ G  P    Q   S   +I +  ++
Sbjct: 251 LTEQVAAVKPDLERLLAIATTLDLATARSRYSYWL-GANPPRFIQRQDS--ETITLRNLR 307

Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
           HPLL+               P+                      VP+D+ +    RVV I
Sbjct: 308 HPLLV------WQQQHEQGQPV----------------------VPVDLLINPLIRVVTI 339

Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
           TGPNTGGKT ++KTLGLA+LM+K GL++PA+    +PWFD +LADIGD QSL+Q+LSTFS
Sbjct: 340 TGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEIPWFDKVLADIGDEQSLQQSLSTFS 399

Query: 417 GHISRIVDILELVSR---------------ESLVLIDEIGSGTDPSEGVALATSILQYLR 461
           GHI RI  ILE +                 +SLVL+DE+G+GTDP EG ALA ++LQYL 
Sbjct: 400 GHIRRISRILEALGNGESGSEDGEKEMPNPQSLVLLDEVGAGTDPVEGSALAIALLQYLA 459

Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
           +   L + TTH+ +L  LK +D RFENA+ EF   TL PTYR+LWG  G SNAL IA  +
Sbjct: 460 NHAQLTIATTHFGELKALKYEDERFENASVEFDESTLSPTYRLLWGIPGRSNALTIALRL 519

Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
           G   +++Q+A+  V     E  Q     +   L  +RR+ E++A  A SL  +   LY+E
Sbjct: 520 GLKPEVVQQAKTQVGEATDEVNQ-----VIAGLEAQRRRQETKAAEAQSLLQQAERLYKE 574

Query: 582 IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKES 641
           +  +A  L+ R + L+A +   VQQ +  AK +I  V++    Q    +A E     +++
Sbjct: 575 VSAKAASLEERESSLRASQEIAVQQAIVQAKGEIAQVIRRL--QKGTPTAQE----AQQA 628

Query: 642 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
            +A+  I + ++P    +      + F P+ G++V +  LG ++A V+  P +D  + V+
Sbjct: 629 TNALNQIGQLYQP----ATPAKPKAGFMPKVGDRVRIPKLG-QIADVIAAPDEDGELSVR 683

Query: 702 YGKMRVRVKKNNIRPIPNSK 721
           +G M++ VK  ++  +   K
Sbjct: 684 FGLMKMTVKLQDVESLDGQK 703


>gi|428776360|ref|YP_007168147.1| MutS2 family protein [Halothece sp. PCC 7418]
 gi|428690639|gb|AFZ43933.1| MutS2 family protein [Halothece sp. PCC 7418]
          Length = 812

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 242/749 (32%), Positives = 382/749 (51%), Gaps = 86/749 (11%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
            +P   + E S  LL +T    A+ +  +       I D +  L  A    +L    +  
Sbjct: 34  HLPIPDNRETSLTLLTETKEVYALEENLTSGWKFDGIYDFSSALERAEYKGILEGETLLQ 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           +  TL  +  + + +        D L+    L EL+       ELE++I  C+D K  + 
Sbjct: 94  IATTLAGMRRLRRVI--------DELEDSPRLKELISQIRTYPELEKEINRCLDDKGKVT 145

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
            +RAS  L  IR   K   + +   L+ +  Q  Q+G I +P+IT+R  R  + +KA HK
Sbjct: 146 -ERASPKLGEIRQNLKERRDRIYQKLQNIMQQ--QSGAIQEPVITQRGERFVLPVKAGHK 202

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +  GI  + S SGAT ++EP   VE  N + +    E  EE  IL  LT E+A+ + +
Sbjct: 203 ESI-RGIVHDSSGSGATLYIEPNSIVELGNQQRQYLRQEKREEERILQALTEEVAEVKED 261

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           ++ L+    ++DLA AR+ ++ W++   P  + S S       I +  ++HPLL+     
Sbjct: 262 LELLLAIATKLDLATARSRYSLWLEANPPQFVESNSR----EPITLRRLRHPLLV----- 312

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                     P+                      VPID++++ ETRVV ITGPNTGGKT 
Sbjct: 313 -WQHHHEQGTPV----------------------VPIDVQIDPETRVVAITGPNTGGKTV 349

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KT+GLA+LM+K GL++PAK    +PWF+ +LADIGD QS+EQ+LSTFSGHI RI  I+
Sbjct: 350 TLKTVGLAALMAKVGLFIPAKEPVEIPWFEQVLADIGDEQSIEQSLSTFSGHIRRITRII 409

Query: 427 ELVS------------------RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           + +                   + SLVL+DE+G+GTDP+EG A+A ++LQYL  RV L +
Sbjct: 410 DALHPSSIDHPEANEDADGETIKLSLVLLDEVGAGTDPAEGSAIAIALLQYLAARVRLTI 469

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY +L  LK +D RFENA+ EF  ETL PTYR+LWG  G SNAL IA+ +G D +I+
Sbjct: 470 ATTHYGELKALKYQDERFENASVEFDDETLSPTYRLLWGIPGRSNALTIARRLGLDPEIL 529

Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
             A+  +     +  Q     +   L ++RR+ E +AR A  L  +    Y+E+   AK 
Sbjct: 530 DLAKNKMGGYSEDINQ-----VISGLEKQRREQEEKAREARQLLEQAEKFYQEVSSRAKA 584

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
           L+ R A LK  + Q V + ++ A+ +I  V++  +   +   A       +++ + +  I
Sbjct: 585 LEAREADLKRSQEQAVNEAVSEARQEIAQVIKQLQQGQKTGQA------AQKATATVNEI 638

Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
              HRP  +   +      + PQ GEQV +    ++   V+  P  +  + +++G M++ 
Sbjct: 639 AGRHRPQPE---TPKPKPQYQPQVGEQVRLPKF-NQTGEVLTAPNAEGKLTIRFGLMKMT 694

Query: 709 VKKNNI------RPIPNSKRKNAANPAPR 731
           V   +I      +P    K++ A+   P+
Sbjct: 695 VSLADIESLDGKKPELPQKQQKASTSTPK 723


>gi|172036803|ref|YP_001803304.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
           sp. ATCC 51142]
 gi|354554613|ref|ZP_08973917.1| MutS2 protein [Cyanothece sp. ATCC 51472]
 gi|171698257|gb|ACB51238.1| DNA mismatch repair protein [Cyanothece sp. ATCC 51142]
 gi|353553422|gb|EHC22814.1| MutS2 protein [Cyanothece sp. ATCC 51472]
          Length = 817

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 242/732 (33%), Positives = 378/732 (51%), Gaps = 91/732 (12%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQPLDLS--TIEDIAGILNSAVSGQLLSPSEICAV 68
           +P   SL+ES++LL QT     + Q+  +  +   I D+   L  A     LS  E+  +
Sbjct: 35  LPIPTSLQESKELLAQTQEIYGLEQNLEIKWTFEGITDVGDSLTRATLKGNLSGQELLNI 94

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
             TL  +  + + + +  +L         P+L +L+ +     ELE+ I  CID +   +
Sbjct: 95  ATTLAGMRRLRRIIDDCEDL---------PVLTDLVADIRTYPELEKAIHHCID-EAGKV 144

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
            DRAS  L  IR   K   + +   L+ +  Q  + G I + +IT+R  R  + +KA  K
Sbjct: 145 ADRASPKLGEIRHNLKEIRDRIYEKLQNIMQQ--KGGAIQETVITQRGDRFVLPVKAGQK 202

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +P GI  + S +G T+++EP   V+  N   +    E  EE AIL  LT ++A+   +
Sbjct: 203 EQIP-GIIHDTSGTGGTFYIEPNSVVQMGNKRRQYLRQEEREEEAILRSLTEQVAEVAED 261

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           ++YL+     +DLA ARA ++ W+ G  P       +    +I +  + HPLL+      
Sbjct: 262 LEYLLAIATVLDLATARARYSFWLGGNAP-----RFIEDTETITLRQLHHPLLV------ 310

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                   +P+                      VPI++++  + RV+ ITGPNTGGKT +
Sbjct: 311 WQERHEQGSPV----------------------VPINVQINPDIRVIAITGPNTGGKTVT 348

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GLA+LM+K GL++PAK    LPWF+ ILADIGD QS+EQNLSTFSGHI RIV ILE
Sbjct: 349 LKTVGLAALMAKVGLFVPAKEPVELPWFEQILADIGDEQSIEQNLSTFSGHIRRIVRILE 408

Query: 428 LVS-------------------------RESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
            +                            SL+L+DE+G+GTDP+EG ALA ++L +L D
Sbjct: 409 ALEGTGDPPLTNGGGEQKTVLSETPHTPHPSLILLDEVGAGTDPAEGSALAIALLHHLAD 468

Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
              L + TTHY +L  LK +D+RFENA+ EF   TL PTYR+LWG  G SNAL+IA+ +G
Sbjct: 469 HAQLTIATTHYGELKALKYEDSRFENASVEFDDRTLSPTYRLLWGIPGRSNALSIAQRLG 528

Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
            D  II  A+  +  L  +      +++   L  +RR+ E +A+ A  L  E    Y E+
Sbjct: 529 LDVDIIDEAKTRIGGLSQD-----VNDVIAGLEAQRREQEEKAQEAQKLLQETEKFYTEV 583

Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
            ++A  L +R   LK  + Q+VQ+ +  AK +I  V++  +   + +         +++ 
Sbjct: 584 SEKATALQQREQDLKRYQEQEVQKAIAEAKEEIAQVIRSLQKGKKSSQK------AQQAT 637

Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
            AI  I +   P            S+ PQ GE++ + +LG + A V+ V  +D+ V+V++
Sbjct: 638 EAITNISQRQLPK-----KAKPKVSYQPQVGEKIRLSNLG-QTAEVLAVSPEDEEVMVRF 691

Query: 703 GKMRVRVKKNNI 714
           G M++ V   +I
Sbjct: 692 GLMKMTVSFKDI 703


>gi|428220318|ref|YP_007104488.1| MutS2 family protein [Synechococcus sp. PCC 7502]
 gi|427993658|gb|AFY72353.1| MutS2 family protein [Synechococcus sp. PCC 7502]
          Length = 697

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 247/713 (34%), Positives = 385/713 (53%), Gaps = 65/713 (9%)

Query: 15  KSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           +S + SQ+LL QT  A  L    S  L L  ++DI+G L  A    +LSP E+ A+  TL
Sbjct: 38  QSYDRSQELLTQTKEAYYLETKLSGGLSLEGVQDISGALARAEVQGVLSPLELFAIATTL 97

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
               N+ + L        D+ +    L  L+ +     +LE++I  CI+ +   +L+RAS
Sbjct: 98  AGARNLRRSL--------DNAENCPALQALVSDVRTYPDLEKEIYHCIE-EGGTVLERAS 148

Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
           E L  IR    +  E + + L+ +  +  +   + + +IT+R  R  + +KASHK  +  
Sbjct: 149 EKLGNIRRTSHQVREKIINTLQGIIQR--KNNALQENIITQRGDRYVLSVKASHKDQI-Q 205

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           GI  + S SG T  +EP   V  NN   +L   E  E   IL+ L+A++     ++  L+
Sbjct: 206 GIVHDASGSGLTLLIEPSSVVAGNNDLRQLVAREQREIEIILTQLSAKVTAVAEDLSRLL 265

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS---INIEGIKHPLLLGSSLRSLS 309
             + EIDLA ARA +A W+    P LS     S   +   I +  ++HPLL+        
Sbjct: 266 AILTEIDLAIARARYAYWLKANPPNLSKSQPQSLSQNPQLITLRNLRHPLLVWQ------ 319

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                      + + S  TV           VP+DI +  E +VVVITGPNTGGKTA++K
Sbjct: 320 -----------EQQESGRTV-----------VPVDILISPEIKVVVITGPNTGGKTATLK 357

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T GLA++M+KAG+++PA     +PWFDLILADIGD QSL+QNLSTFSGHI RI  ILEL+
Sbjct: 358 TFGLAAIMAKAGMFIPAPEPVEIPWFDLILADIGDEQSLQQNLSTFSGHIRRIGRILELI 417

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
           +  SLVL+DE+G+GTDPSEG A+AT++L++L +   L + TTH+ +L  LK ++ +FENA
Sbjct: 418 TPASLVLLDEVGAGTDPSEGSAIATALLEHLANHANLTIATTHFGELKTLKYQNPQFENA 477

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF    L PTY++LWG  G SNAL IA+ +G    II  AQ  V         +  SE
Sbjct: 478 SVEFDDVQLAPTYKLLWGIPGRSNALAIARRLGLPEDIISSAQNHV--------GYGSSE 529

Query: 550 LYQSLME---ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
           +   + E   +RR+   + + A  L AE+  L++EI D+++ L  +   L+AK+  +V  
Sbjct: 530 INLVIAELETQRRQQTEKTQAATILLAEMEKLHKEISDKSQLLRSQYQELRAKQEIEVTA 589

Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV-SETNT 665
            +N AK +I  V++  +      + D+     + +++ +  I + H P       +    
Sbjct: 590 AINQAKKEIARVIRKLQ------AGDQSPQSAQHADNRMTQISKMHLPSQQKQPQANLEP 643

Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDD-DTVLVQYGKMRVRVKKNNIRPI 717
             + P+ G+QV +  L +K+  V+    ++ + + V+ G M++ VK  +I  +
Sbjct: 644 IKYIPKLGDQVKIIKL-NKIGQVLSTGTNNSNEIGVRVGGMKMTVKIEDIEAV 695


>gi|428778485|ref|YP_007170271.1| MutS2 family protein [Dactylococcopsis salina PCC 8305]
 gi|428692764|gb|AFZ48914.1| MutS2 family protein [Dactylococcopsis salina PCC 8305]
          Length = 798

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 226/668 (33%), Positives = 356/668 (53%), Gaps = 69/668 (10%)

Query: 91  DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
           D L+    L  L+       ELE++I  C+D K  +  +RAS  L  IR + K   + + 
Sbjct: 109 DGLEASPRLKALISQVRTYPELEKEINRCLDDKGKVT-ERASPKLAEIRQKIKERRDRIY 167

Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
             L+ +  Q  Q G I +P+IT+R  R  + +KA  K  +  GI  + SS+GAT ++EP 
Sbjct: 168 QKLQNIIQQ--QGGAIQEPVITQRNDRFVLPVKAGQKESI-RGIVHDSSSTGATLYIEPN 224

Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
             VE  N + +    E  EE  +L +LT ++A  + +++ L+    ++DLA AR+ ++ W
Sbjct: 225 SVVELGNQQRQYIRQEQREEERVLQVLTEQVATVKEDLELLLAVATKLDLATARSRYSLW 284

Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
           ++   P     +    +  I +  ++HPLL+               P+            
Sbjct: 285 LEANPPRFVEGNS---NEPITLRRLRHPLLV------WQQHHEQGTPV------------ 323

Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
                     VPID+++  ETRVV ITGPNTGGKT ++KT+GLA+LM+K GL++PAK   
Sbjct: 324 ----------VPIDVQINPETRVVAITGPNTGGKTVTLKTVGLAALMAKVGLFVPAKEPV 373

Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS------RESLVLIDEIGSGT 444
            +PWFD ILADIGD QS+EQNLSTFSGHI RI  I++ +       +  L+L+DE+G+GT
Sbjct: 374 EIPWFDKILADIGDEQSIEQNLSTFSGHIRRITRIIDSLQPSDSEIQPCLILLDEVGAGT 433

Query: 445 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 504
           DP+EG A+A ++L+YL  +V L + TTHY +L  LK +D RFENA+ EF+ ETL PTYR+
Sbjct: 434 DPAEGSAIAIALLKYLAQQVRLTIATTHYGELKALKYQDERFENASVEFNDETLSPTYRL 493

Query: 505 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 564
           LWG  G SNAL IA+ +G   +I+  A+  +     +  Q     +   L  +RR+ E +
Sbjct: 494 LWGIPGRSNALTIARRLGLAGEILDMAKNRIGGGSEDINQ-----VIAGLENQRREQEEK 548

Query: 565 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 624
           A+ A  L  +    Y+E+   A+ L+ R   LK  + Q V Q ++ AK +I  V++  + 
Sbjct: 549 AQEARQLLEQAEKFYQEVSSRAQALEARETELKRSQEQAVNQAISEAKQEIAQVIKQLQK 608

Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
                  ++     +++ +++  I   HRP  +    + N   + PQ GE+V +    ++
Sbjct: 609 ------GEKTGQEAQKATASVNEIASRHRPQIEPPKPKPN---YQPQIGEKVRLSQF-NQ 658

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRV------KKNNIRP-IP------NSKRKNAANPAPR 731
              V+  P  D  + ++ G M++ V        + I+P +P      NS +K  AN AP 
Sbjct: 659 TGEVLTAPNADGKLTIRLGTMKMSVSLADIESLDGIKPEVPQKQKSSNSSQKKPANNAPT 718

Query: 732 LRKQVCTC 739
           +R +  T 
Sbjct: 719 VRTEQNTL 726


>gi|218441797|ref|YP_002380126.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
           sp. PCC 7424]
 gi|218174525|gb|ACK73258.1| MutS2 family protein [Cyanothece sp. PCC 7424]
          Length = 803

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 247/701 (35%), Positives = 372/701 (53%), Gaps = 89/701 (12%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
           +G    Q  ++P  K  EES +LL QT     +    +  L    I DI   L  A  G 
Sbjct: 29  LGAIAAQYMRLPDTK--EESCQLLAQTEEVYDLENRLNTKLSFDGISDIGDALERADLGG 86

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIG 117
           LLS  E+ ++  TL  V  + + + E  E+         P+L EL+ +     E+E+ I 
Sbjct: 87  LLSGKELLSIATTLAGVRRLRRIIEEQEEI---------PVLKELVADVRTYPEIEQDIH 137

Query: 118 FCI--DCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLI 171
            CI  D K   + DRAS  L  IR +    R+R    L  ++++      Q+G I + +I
Sbjct: 138 RCIEEDGK---VSDRASPRLREIRGQIKVVRERIYRKLQDIMQR------QSGAIQESVI 188

Query: 172 TKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEET 231
           T+R  R  + +KA  K  +  GI  + SS+GAT ++EP   VE  N   +    E  EE 
Sbjct: 189 TQRGDRFVLPVKAPQKDQI-SGIIHDSSSTGATLYIEPHSVVEQGNQLRQHHRQEQIEEE 247

Query: 232 AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
            IL  LT +IA+ + +++YL+     +DLA AR+ ++ W+    P       +     I 
Sbjct: 248 VILRGLTQQIAQVKEDLEYLLAVATTLDLAVARSRYSWWLQANPP-----RFIDSTEPIT 302

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
           +  ++HPLL+                     +N E  V           VPI+++V+ + 
Sbjct: 303 LRQLRHPLLVWQ-------------------QNHEQGVEV---------VPINVQVDPKI 334

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
           RVV ITGPNTGGKT ++KT+GLA+LM+KAG+++PAK    LPWF+ ILADIGD QSL+Q+
Sbjct: 335 RVVAITGPNTGGKTVTLKTIGLATLMAKAGIFIPAKVPVELPWFEEILADIGDEQSLQQS 394

Query: 412 LSTFSGHISRIVDILELVS----------RESLVLIDEIGSGTDPSEGVALATSILQYLR 461
           LSTFSGHI R++ I+E ++            SLVL+DE+G+GTDP+EG ALAT++L+YL 
Sbjct: 395 LSTFSGHIRRMIRIIEALNGSSPEETKPPASSLVLLDEVGAGTDPAEGSALATALLKYLA 454

Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
           D+  L + TTHY +L  LK +D RFENA+ EF+ +TL PTYR+LWG  G SNAL IA  +
Sbjct: 455 DQAQLTIATTHYGELKALKYQDERFENASVEFNDQTLSPTYRLLWGIPGRSNALTIAGRL 514

Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
           G   +II+ A+  V     +  Q     +   L E+RR+ E +A+ A+ L  E    Y E
Sbjct: 515 GLRPEIIEEARTRVGGFSEDINQ-----VIAGLEEQRREQEQKAKEASKLLQETERFYAE 569

Query: 582 IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKES 641
           + ++A  L +R   LK  + Q++Q+ +  AK +I  V++    QL+  +    N+  +++
Sbjct: 570 VSEKANALQQREKDLKQLQEQEIQKAIAQAKAEIAQVIR----QLQQGNTTAQNA--QKA 623

Query: 642 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLG 682
             A+  I E   P            S+ P+ GE+V +  LG
Sbjct: 624 TDALTQIAERQLPKQKHP-----PISYRPKVGEKVRIPGLG 659


>gi|376003750|ref|ZP_09781556.1| DNA mismatch repair protein MutS [Arthrospira sp. PCC 8005]
 gi|375327894|emb|CCE17309.1| DNA mismatch repair protein MutS [Arthrospira sp. PCC 8005]
          Length = 818

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 244/742 (32%), Positives = 386/742 (52%), Gaps = 73/742 (9%)

Query: 10  QIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+   ++ EE+ +LL QT  A  L +   Q L L  I+DI   L  A    +L   E+ A
Sbjct: 36  QLAIPETKEETDRLLAQTKEAYQLELKLVQGLSLDGIQDIGASLERADRQGILFGEELLA 95

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           +  TL     + + +        D  +    L  L++      ELE++I  CID +  + 
Sbjct: 96  IATTLAGARQLRRVI--------DDQEDVPVLTSLVEELRTYPELEQEIHRCIDERGEVT 147

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
            DRAS  +  IRA  +   + +  +L+ +  +  QA  + + +IT+R  R  + +KA  K
Sbjct: 148 -DRASVKMGAIRARLQSTRDRIYQVLQGILQRKAQA--VQQQIITQREGRFVIPVKAPQK 204

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +P GI  + S++GAT ++EP   V  NN   ++  +E  E  AI   LT ++A    +
Sbjct: 205 DAIP-GIVHDASTTGATVYVEPHSIVALNNQLRQIQRAEQTEAEAIRRSLTEQVAAVVPD 263

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           ++ L+  V  IDLA A+A ++ W+    P        S   +IN+  ++HPLL+      
Sbjct: 264 LEKLLAIVTTIDLALAKARYSYWLQANPPRFIDPGDTS--ETINLRQLRHPLLI------ 315

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                      + + E     V            PIDI +  + RVV ITGPNTGGKT +
Sbjct: 316 ----------WQQEYEQGPEVV------------PIDITINPQIRVVAITGPNTGGKTVT 353

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GLA++M+K GL++PA+    +PWF  +LADIGD QS+EQ+LSTFSGHI RI  IL+
Sbjct: 354 LKTIGLAAIMAKVGLFIPAREPVEMPWFGQVLADIGDEQSIEQSLSTFSGHIRRITRILQ 413

Query: 428 LVSR--------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
            +                 SLVL+DEIG+GTDP+EG ALA ++LQ   D   L V TTH+
Sbjct: 414 AIGEPMRVTEAGESDRICPSLVLLDEIGAGTDPTEGTALAIALLQKFADLTRLTVATTHF 473

Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
            DL  LK KDTRFENA+ EF   +L+PTYR+LWG  G SNAL IA+ +G D  I++ A  
Sbjct: 474 GDLKALKYKDTRFENASVEFDDASLQPTYRLLWGIPGRSNALKIAERLGLDHDIVKLAGS 533

Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
            V     +  Q     + + L  +RR+ E++A  A+ L  E   L+ E+ + A  L  R 
Sbjct: 534 YVGGGDEDVNQ-----VIEGLEAQRRQQETKAIAASQLLQETERLHGELAERAISLQERE 588

Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
             LK  + Q++++ L  AK +I  V++  + Q +  +AD      +++ + + AI E + 
Sbjct: 589 RQLKQAQEQEIKETLLQAKAEIAKVIRRLQ-QGKATAADA-----QKATARLDAIAENYL 642

Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
           P      +   + +F P+ G+++ +  +G + A ++  P D++ + V++G M++ V    
Sbjct: 643 PSR--QATPVRSPNFMPKVGDRIRIPRIG-QTAEILSGPDDNNQLTVRFGIMKMTVGLGE 699

Query: 714 IRPIPNSKRK-NAANPAPRLRK 734
           I  +   K +    +P P+  K
Sbjct: 700 IESLDGQKVELPKTSPTPKADK 721


>gi|427723948|ref|YP_007071225.1| MutS2 protein [Leptolyngbya sp. PCC 7376]
 gi|427355668|gb|AFY38391.1| MutS2 protein [Leptolyngbya sp. PCC 7376]
          Length = 801

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 234/714 (32%), Positives = 382/714 (53%), Gaps = 66/714 (9%)

Query: 13  FGKSLEESQKLLNQTS--AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
           F  S  ES+ LL QT     L       +    I +++  L  A  G ++S  ++  +  
Sbjct: 39  FPGSQAESEILLAQTVEITELDAETEGGISFEGIGNVSESLERATIGGIISGQDLLLIAT 98

Query: 71  TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
           TL  V  + ++L E +EL+         LL L++      ELE++I  CID +  +  DR
Sbjct: 99  TLAGVRKL-RRLVENSELE------LPQLLFLVEQLRTYPELEKEIHHCIDDRGDVT-DR 150

Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           AS  L  IR + K   + +   L ++  +    G I + +IT+R  R  + +KA  K  +
Sbjct: 151 ASPKLAGIREKMKGARDGIYQTLNRIMQR--HGGSIQEAVITQRGDRFVLPVKAGQKEHI 208

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
           P GI  ++SS+G+T+++EPK  ++  N   + +  E  E   IL  LT ++A+   +++ 
Sbjct: 209 P-GIVHDISSTGSTFYVEPKAIIDLGNRLRQATKQEQREIEIILRQLTEKVAEVVEDLEK 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
           L+     IDLA AR+ ++ W++   P  +     +      +  + HPLL+         
Sbjct: 268 LLAIATTIDLATARSRYSHWLEANPPKFTKPEQPTM-----LRKLHHPLLVWQ------- 315

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                   +   E  E+             VPI++++  + +VV ITGPNTGGKT ++KT
Sbjct: 316 --------QKQEEGDEV-------------VPINVQIRPDIKVVAITGPNTGGKTVTLKT 354

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LG+A+LM+K GL++PA     LPWF+ +LADIGD QSL+Q+LSTFSGHI R+  I+E + 
Sbjct: 355 LGMAALMAKVGLFIPAIAPVELPWFNHVLADIGDEQSLQQSLSTFSGHIRRVGRIIETLQ 414

Query: 431 RE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
            E   +LVL+DE+G+GTDP+EG ALA ++L+YL D   L V TTHY +L  LK  D RFE
Sbjct: 415 AEDENNLVLLDEVGAGTDPTEGSALAIALLKYLADHAALTVATTHYGELKALKYDDDRFE 474

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NA+ EF   +LRPTY++LWG  G SNAL IAK +G D ++I  AQ L+     +      
Sbjct: 475 NASVEFDEYSLRPTYKLLWGIPGRSNALAIAKRLGLDEQVIDAAQSLLGNSNTD-----V 529

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
           +E+  +L  +RR+ E +++ A +L  +    Y E+  +A DL RR   LK  + QQVQ+ 
Sbjct: 530 NEVIAALEAQRREQEQKSQEAEALLKQTERFYTEVSSKAADLQRRETELKQAQDQQVQEA 589

Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
           +  AK +I  V++  +     A         ++++ A  A+ E     +  +  +   + 
Sbjct: 590 IAEAKSEIAQVIRTLQKGKPSA---------QKAQKATNALGEI--AQEKLAQPKKKKAG 638

Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           + P+ GE++ +  LG + A V+E+  ++ T++ ++G M++ ++   I  +   K
Sbjct: 639 YQPKLGEKIRISKLG-QTAEVIELNEENKTLVARFGIMKMSLQWTEIESLQGQK 691


>gi|113476819|ref|YP_722880.1| recombination and DNA strand exchange inhibitor protein
           [Trichodesmium erythraeum IMS101]
 gi|110167867|gb|ABG52407.1| MutS2 family protein [Trichodesmium erythraeum IMS101]
          Length = 857

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 259/771 (33%), Positives = 401/771 (52%), Gaps = 117/771 (15%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
           +G        IP  ++  E+  LL QT     L  +  Q L    IEDI+G L  +  G 
Sbjct: 27  LGAVTASHLSIPLTRT--ETIHLLAQTQEVYKLETLLVQGLSFDGIEDISGSLKRSELGG 84

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           +LS  E+ A+  TL  V    +KL  A +   +S    S L EL+ +     ELE++I  
Sbjct: 85  ILSGYELLAIATTLAGV----RKLRRAID-SYESEYELSVLPELVADMRTYPELEQEIHR 139

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
           CID +   + DRAS  L  IR +  R  + +D++L+ +  +  +A  I +P+IT+R  R 
Sbjct: 140 CIDDRG-DVTDRASPKLAGIREKIHRLRDRIDNILRGILQR--KANAIQQPIITQRDDRF 196

Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
            + +KA  K  +P GI  + S++G+T ++EP   V  NN   +L      EE AI   LT
Sbjct: 197 VIPVKAPQKDAVP-GIVHDTSTTGSTLYIEPNAVVNLNNQMRQLQRQAQREEEAIRQALT 255

Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
            ++A+ + ++  L+     IDLA ARA ++ W++   P  +    +  +  + +  ++HP
Sbjct: 256 QKVAEVKEDLDQLLAITTIIDLATARARYSLWLEATPPQFTD---LDSEQPMTMGQLRHP 312

Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
           LL+                 + + +NS               VPID+KV    RVV ITG
Sbjct: 313 LLVWQQ--------------QYEQKNS--------------VVPIDVKVRPPVRVVAITG 344

Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
           PNTGGKT ++KTLGLA+LM+K GL++PA +  +LPWF+ ILADIGD QSLEQ+LSTFSGH
Sbjct: 345 PNTGGKTVTLKTLGLAALMAKVGLFIPANDPVKLPWFEQILADIGDEQSLEQSLSTFSGH 404

Query: 419 ISRIVDILE--------LVSRE-------------------------------------- 432
           I RI+ ILE        ++S++                                      
Sbjct: 405 IRRIIRILEAIDVSKANIISQKLKVKTQNSKVIDSDDFSENENNSEIDNLSGNENLESSN 464

Query: 433 ---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
              +LVL+DE+G+GTDP+EG ALA S+LQYL D   L V TTH+ +L  LK +D RFENA
Sbjct: 465 LSSTLVLLDEVGAGTDPTEGSALAISLLQYLADNALLTVATTHFGELKALKYEDERFENA 524

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF   +L+PTYR+LWG  G SNA+ IA  +G  + II RAQ  V     +  Q     
Sbjct: 525 SVEFDSNSLQPTYRLLWGIPGRSNAMTIAGRLGLKQDIIDRAQDYVGDSSEDVNQ----- 579

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
           +   L E+R+K E++A+ A++L  E   L++E+  +A  L  R   LK  +   VQ+++ 
Sbjct: 580 VIAGLEEQRQKQETKAKEASALLQETESLHQEVARKASALKERERELKLAQEVAVQEKIA 639

Query: 610 FAKVQIDTVVQDFEN---QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            AK +I  V+++ +      R+A         +++ +AI  I E + P    +       
Sbjct: 640 EAKAEIARVIRNLQQGPLTARNA---------QKATNAINEISEKYLPS---ATPPPKKP 687

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
            F P+ G+++ +  +G ++A V+  P ++D + V++G M++ V   N+R +
Sbjct: 688 GFMPKEGDRIRIPKIG-QIAEVLSAPNENDELTVKFGVMKMTV---NLREV 734


>gi|284929397|ref|YP_003421919.1| MutS2 family protein [cyanobacterium UCYN-A]
 gi|284809841|gb|ADB95538.1| MutS2 family protein [cyanobacterium UCYN-A]
          Length = 810

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 246/732 (33%), Positives = 381/732 (52%), Gaps = 90/732 (12%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDL--STIEDIAGILNSAVSGQ 58
           MG    Q   IP  + L ESQ+LL+QT     + Q   + L    I DI  ++  A  G 
Sbjct: 27  MGITAAQNPDIP--ELLTESQELLSQTEEVYYLEQDPKIKLIFEGIVDIRDVVKIAALGG 84

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
            LS  ++  +  TL  V  + K +    +L   +L++      L+ N     ELE+ I +
Sbjct: 85  YLSGKDLLGIAITLDKVRRLRKIVNSYEKLPLFNLKK------LVNNIKTYPELEQTIRY 138

Query: 119 CIDCKLLIILDRASEDLE----LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
           C+D     I + AS  L     L+R  R    + L S++ K      +AG I + LIT+R
Sbjct: 139 CVDENG-DITEHASSKLSKIRLLLRELRNEIYQKLQSIINK------KAGAIQESLITQR 191

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
            +R  + +K   K  +P GI  + S++G T ++EP   V+  N   +    E  EE  IL
Sbjct: 192 NNRFVIPVKTLQKDQIP-GIVHDTSNTGMTVYIEPSYIVDIGNKYCQYLRQETIEEIVIL 250

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
             LT +IA+    +KYL++ + ++DLA ARA ++ W+ G  P       +    +I +  
Sbjct: 251 RQLTEKIAEVAESLKYLVEAIQKLDLATARARYSLWLGGNIP-----QFIEEGETIILRK 305

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
           + HPLL+    +                           +G+    VPIDI++  +  VV
Sbjct: 306 LYHPLLIWQQKK--------------------------EQGVQ--VVPIDIQINSKINVV 337

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
            ITGPNTGGKT ++KTLGLA+LM+K GL++PA +  +LPWF  +LADIGD QS+ QNLST
Sbjct: 338 SITGPNTGGKTVTLKTLGLAALMAKVGLFIPAVSPVKLPWFKNVLADIGDEQSITQNLST 397

Query: 415 FSGHISRIVDILELVSR----------------ESLVLIDEIGSGTDPSEGVALATSILQ 458
           FS HI RI+ IL+ VS                  SLVL+DE+G+GTDP+EG ALA S+L 
Sbjct: 398 FSSHIRRIILILKAVSNSSKSNSSKILNKFKNCSSLVLLDEVGAGTDPTEGSALAISLLS 457

Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
           +L +   L + TTHY ++  LK +D+RFENA+ EF+ +T  P+YR+LWG  G SNA++IA
Sbjct: 458 HLANHALLTIATTHYGEIKALKYRDSRFENASVEFNDQTFSPSYRLLWGIPGRSNAISIA 517

Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
           +++G D  I+Q A+ +V       Q    +++   L E+R K E +A  A  L  +  + 
Sbjct: 518 QNLGLDLNILQAARNIV-----GEQSKDVNDIILGLEEQRNKQELKANEAQELLKQAKNF 572

Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 638
           Y E+ D+A  L  R   LK  + +++Q+ ++ AK +I  V++  +        D      
Sbjct: 573 YTEVSDKAVILKEREQELKHFQEKEIQKAISSAKEEIAQVIRHLQ------QGD------ 620

Query: 639 KESESAIAAIVEA-HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 697
           K S+ A+ A  E  +   +     +   SS+ P+ GE+V +   G   A V++V  D   
Sbjct: 621 KTSQKALQATKEILNISKEKLPQVKKEYSSYCPKIGEKVKITKFGQN-AQVLDVIADSQE 679

Query: 698 VLVQYGKMRVRV 709
           V+V++G M +++
Sbjct: 680 VVVRFGLMTMKI 691


>gi|409991618|ref|ZP_11274864.1| recombination and DNA strand exchange inhibitor protein
           [Arthrospira platensis str. Paraca]
 gi|291572107|dbj|BAI94379.1| MutS2 family protein [Arthrospira platensis NIES-39]
 gi|409937528|gb|EKN78946.1| recombination and DNA strand exchange inhibitor protein
           [Arthrospira platensis str. Paraca]
          Length = 816

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 243/738 (32%), Positives = 385/738 (52%), Gaps = 75/738 (10%)

Query: 10  QIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+   ++ EE+ +LL QT  A  L +   Q L L  I+DI   L  A    +L   E+ A
Sbjct: 34  QLAIPETKEETDRLLAQTKEAYQLQLKLVQGLSLDGIQDIGASLERADRQGILFGEELLA 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           +  TL     + + +        D  +    L  L++      ELE++I  CID +  + 
Sbjct: 94  IATTLAGARQLRRVI--------DDQEDVPVLTSLVEELRTYPELEQEIHRCIDERGEVT 145

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
            DRAS  +  IRA  +   + +  +L+ +  +  QA  + + ++T+R  R  + +KA  K
Sbjct: 146 -DRASVKMGEIRARLQSTRDRIYQILQGILQRKAQA--VQQQIVTQREGRFVIPVKAPQK 202

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +P GI  + S++GAT ++EP   V  NN   ++  +E  E  AI   LT ++A    +
Sbjct: 203 DAIP-GIVHDASTTGATVYVEPHPIVALNNELRQIQRAEQTEAEAIRRSLTEQVAAVVPD 261

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           ++ L+  V  IDLA A+A ++ W+    P        S   +IN+  ++HPLL+      
Sbjct: 262 LEKLLAIVTTIDLALAKARYSYWLKANPPRFIDPGDTS--ETINLRQLRHPLLI------ 313

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                      + + E     V            PIDI +  + RVV ITGPNTGGKT +
Sbjct: 314 ----------WQQEYEQGPEVV------------PIDITINPQIRVVAITGPNTGGKTVT 351

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GLA++M+K GL++PA+    +PWF  +LADIGD QS+EQ+LSTFSGHI RI  IL+
Sbjct: 352 LKTIGLAAIMAKVGLFIPAREPVEMPWFGQVLADIGDEQSIEQSLSTFSGHIRRITRILQ 411

Query: 428 LVSR--------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
            +                +SLVL+DEIG+GTDP+EG ALA ++LQ   DR  L V TTH+
Sbjct: 412 AIGEPMRVTEAGEYDRICQSLVLLDEIGAGTDPTEGTALAIALLQTFADRTRLTVATTHF 471

Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
            DL  LK KDTRFENA+ EF+  +L+PTYR+LWG  G SNAL IA+ +G D  I++ A  
Sbjct: 472 GDLKALKYKDTRFENASVEFNDASLQPTYRLLWGIPGRSNALKIAERLGLDHDIVKLAGS 531

Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
            V     +  Q     +   L  +RR+ E++A  A+ L  E   L+ E+ + A  L  R 
Sbjct: 532 YVGGGDEDVNQ-----VIAGLEAQRRQQETKAIAASQLLKETERLHGELAERAISLQERE 586

Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
             LK  + +++++ L  AK +I  V++  + Q +  +AD      +++ + + AI E + 
Sbjct: 587 RQLKQAQEKEIKETLLQAKGEIAKVIRRLQ-QGKPTAAD-----AQKATATLDAIAENYL 640

Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
           P      +     +F P+ G+++ +  +G + A ++  P D++ + V++G M++ V    
Sbjct: 641 PSR--QATPAPLPNFMPKVGDRIRIPRIG-QTAEILSGPDDNNQLTVRFGIMKMTVGLGE 697

Query: 714 IRPIPNSK---RKNAANP 728
           I  +   K    K +A P
Sbjct: 698 IESLDGQKVELPKTSATP 715


>gi|209523920|ref|ZP_03272472.1| MutS2 family protein [Arthrospira maxima CS-328]
 gi|423063765|ref|ZP_17052555.1| MutS2 family protein [Arthrospira platensis C1]
 gi|209495592|gb|EDZ95895.1| MutS2 family protein [Arthrospira maxima CS-328]
 gi|406714614|gb|EKD09775.1| MutS2 family protein [Arthrospira platensis C1]
          Length = 816

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 244/742 (32%), Positives = 386/742 (52%), Gaps = 73/742 (9%)

Query: 10  QIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+   ++ EE+ +LL QT  A  L +   Q L L  I+DI   L  A    +L   E+ A
Sbjct: 34  QLAIPETKEETDRLLAQTKEAYQLELKLVQGLSLDGIQDIGASLERADRQGILFGEELLA 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           +  TL     + + +        D  +    L  L++      ELE++I  CID +  + 
Sbjct: 94  IATTLAGARQLRRVI--------DDQEDVPVLTSLVEELRTYPELEQEIHRCIDERGEVT 145

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
            DRAS  +  IRA  +   + +  +L+ +  +  QA  + + +IT+R  R  + +KA  K
Sbjct: 146 -DRASVKMGEIRARLQSTRDRIYQVLQGILQRKAQA--VQQQIITQREGRFVIPVKAPQK 202

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +P GI  + S++GAT ++EP   V  NN   ++  +E  E  AI   LT ++A    +
Sbjct: 203 DAIP-GIVHDASTTGATVYVEPHSIVVLNNQLRQIQRAEQTEAEAIRRSLTEQVAAVVPD 261

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           ++ L+  V  IDLA A+A ++ W+    P        S   +IN+  ++HPLL+      
Sbjct: 262 LEKLLAIVTTIDLALAKARYSYWLQANPPRFIDPGDTS--ETINLRQLRHPLLI------ 313

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                      + + E     V            PIDI +  + RVV ITGPNTGGKT +
Sbjct: 314 ----------WQQEYEQGPEVV------------PIDITINPQIRVVAITGPNTGGKTVT 351

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GLA++M+K GL++PA+    +PWF  +LADIGD QS+EQ+LSTFSGHI RI  IL+
Sbjct: 352 LKTIGLAAIMAKVGLFIPAREPVEMPWFGQVLADIGDEQSIEQSLSTFSGHIRRITRILQ 411

Query: 428 LVSR--------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
            +                 SLVL+DEIG+GTDP+EG ALA ++LQ   D   L V TTH+
Sbjct: 412 AIGEPMRVTEAGESDRICPSLVLLDEIGAGTDPTEGTALAIALLQKFADLTRLTVATTHF 471

Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
            DL  LK KDTRFENA+ EF   +L+PTYR+LWG  G SNAL IA+ +G D  I++ A  
Sbjct: 472 GDLKALKYKDTRFENASVEFDDASLQPTYRLLWGIPGRSNALKIAERLGLDHDIVKLAGS 531

Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
            V     +  Q     + + L  +RR+ E++A  A+ L  E   L+ E+ + A  L  R 
Sbjct: 532 YVGGGDEDVNQ-----VIEGLEAQRRQQETKAIAASQLLQETERLHGELAERAISLQERE 586

Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
             LK  + Q++++ L  AK +I  V++  + Q +  +AD      +++ + + AI E + 
Sbjct: 587 RQLKQAQEQEIKETLLQAKAEIAKVIRRLQ-QGKATAAD-----AQKATARLDAIAENYL 640

Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
           P      +   + +F P+ G+++ +  +G + A ++  P D++ + V++G M++ V    
Sbjct: 641 PSR--QATPVRSPNFMPKVGDRIRIPRIG-QTAEILSGPDDNNQLTVRFGIMKMTVGLGE 697

Query: 714 IRPIPNSKRK-NAANPAPRLRK 734
           I  +   K +    +P P+  K
Sbjct: 698 IESLDGQKVELPKTSPTPKADK 719


>gi|434391179|ref|YP_007126126.1| MutS2 protein [Gloeocapsa sp. PCC 7428]
 gi|428263020|gb|AFZ28966.1| MutS2 protein [Gloeocapsa sp. PCC 7428]
          Length = 804

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 247/735 (33%), Positives = 389/735 (52%), Gaps = 81/735 (11%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
           +G    +  QIP  +S ++S+ LL QT  A  +  S    L    I+DI   L       
Sbjct: 27  LGATAARNLQIP--QSQKQSEALLAQTQEAYQLENSLTGGLSFDGIQDIGDALTRVQRQG 84

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
           +L+  E+ A+  TL     + + +    ++         P+L  L+++     E+E++I 
Sbjct: 85  ILTGEELLAIATTLAGTRQLRRAIDNQPDV---------PVLSALVEDIRTYPEIEQEIH 135

Query: 118 FCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITK 173
            CID +  +  DRAS  L  IR+     R +  + L ++L++      QA  + + LITK
Sbjct: 136 RCIDERGQVS-DRASTTLSNIRSSLRQIRSQITQKLQNILQR------QANAVQEQLITK 188

Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
           R  R  + +KA  K  +P GI  + S+SGAT ++EP   V   N   +L+  E AEETAI
Sbjct: 189 RGDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSVVPLGNQLRQLTVKEQAEETAI 247

Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
              L+ +IA    ++++L+     +DLA ARA ++ W+    P    +       +I + 
Sbjct: 248 RRQLSEQIAAVTPDLEHLLSVATILDLACARARYSYWLKANPPRFIQRGE---GETITLR 304

Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
            + HPLL+         A                             VP+D+ ++ + RV
Sbjct: 305 QLHHPLLVWQFAHEQGTAV----------------------------VPVDLVIKPQIRV 336

Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
           V ITGPNTGGKT ++KTLGLA+LM+K GL++PA+    +PWFD +LADIGD QSL+Q+LS
Sbjct: 337 VTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEIPWFDQVLADIGDEQSLQQSLS 396

Query: 414 TFSGHI---SRIVDILE----LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
           TFSGHI   SRI+D L     L    SLVL+DE+G+GTDP+EG ALA ++LQYL D   L
Sbjct: 397 TFSGHIRRISRIIDALSNTQALTPHSSLVLLDEVGAGTDPAEGSALAIALLQYLADHTQL 456

Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
           ++ TTH+ +L  LK +D RFENA+ EF  E+L PTYR+LWG  G SNAL IA+ +G + +
Sbjct: 457 SIATTHFGELKALKYQDERFENASVEFDEESLSPTYRLLWGIPGRSNALTIARRLGLNAE 516

Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
           ++++A+  +     +  Q     +   L  +RR  E++A  A  L  ++  LY E+  +A
Sbjct: 517 VVEQAKTKIGGATEDVNQ-----VIAGLEAQRRLQETKAAEAEQLLQQVQRLYTEVSQKA 571

Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 646
             L  R AHL+ ++ Q +QQ L  AK +I  V++    +L+  S    ++  +++ +A+ 
Sbjct: 572 AQLQEREAHLRQQQEQSIQQALVQAKSEIAQVIR----RLQQGSTTAQDA--QQATNALT 625

Query: 647 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
            I + H               F PQ G+++ +  L ++ A V+  P +D  + V++G M+
Sbjct: 626 QIAKNH-----LPPPPKPKPGFKPQVGDRIRIPRL-EQTAEVISAPDEDGELSVRFGIMK 679

Query: 707 VRVKKNNIRPIPNSK 721
           + VK  +I  +   K
Sbjct: 680 MNVKLEDIESLDGQK 694


>gi|428773368|ref|YP_007165156.1| MutS2 family protein [Cyanobacterium stanieri PCC 7202]
 gi|428687647|gb|AFZ47507.1| MutS2 family protein [Cyanobacterium stanieri PCC 7202]
          Length = 822

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 247/763 (32%), Positives = 394/763 (51%), Gaps = 94/763 (12%)

Query: 4   AVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS-QP-LDLSTIEDIAGILNSAVSGQLLS 61
             +  + +   K+L E+QKLL QT     +  S  P    S I DI   L  A  G +L 
Sbjct: 28  GAIASSHLTIPKTLSETQKLLEQTKEVYHIETSLNPNWSFSGIHDIGDALERAKLGGILK 87

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
             E+  +  TL  V    +KL    E     L+    L EL+++     ELE++I +CID
Sbjct: 88  GEELLNLATTLAGV----RKLRRVIE----DLEDSPTLKELVESLRTFPELEQEIHYCID 139

Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMC 179
            +  I  +RAS  L  IR    + ++ L S +++    I Q  G  + +P++T+R  R  
Sbjct: 140 DRGEIT-ERASPQLGEIR----QKIKGLRSKIQQTLQNIIQRNGNALQEPVVTQRGDRFV 194

Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
           + +KASH   +  GI  + S++G+T + EPK  ++  N        E  EE  IL  LT 
Sbjct: 195 LPVKASHSGQI-SGIVHDTSTTGSTLYTEPKSIIDLGNRLQTSRGQEKREEEKILRTLTE 253

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI--EGIKH 297
           ++A+   E++ L+     +DLA A+A ++ W++G  P       V F S  NI    ++H
Sbjct: 254 KVAEVWEELEQLLAIATALDLATAKARYSMWLEGNPP-----QFVDFQSQENITLRQLRH 308

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
           PLL+    +  S A                             VPID+ ++ +TRVV IT
Sbjct: 309 PLLIWQQKKEESGAV----------------------------VPIDVLIKSDTRVVAIT 340

Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
           GPNTGGKT ++KT+G+ +LM+K G+++PAK+   +PWFD +LADIGD QSLEQNLSTFSG
Sbjct: 341 GPNTGGKTVTLKTIGITALMAKVGIFIPAKDPVLIPWFDQVLADIGDEQSLEQNLSTFSG 400

Query: 418 HISRIVDILELVS---------------------RESLVLIDEIGSGTDPSEGVALATSI 456
           HI RI+ I++ ++                       SLVL+DE+G+GTDP+EG A+A +I
Sbjct: 401 HIRRIIRIMDALNGSTPIQNPDDDSPTVETQHGLSNSLVLLDEVGAGTDPTEGSAIAIAI 460

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L++L +   L + TTHY +L  LK  D+RFENA+ EF   +L+PTYR+LWG  G SNA+ 
Sbjct: 461 LKHLAEHNLLTIATTHYGELKTLKYNDSRFENASVEFDDVSLQPTYRVLWGIPGRSNAII 520

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           IA+ +G    +I  +Q+L      +  Q     L   L  +RR+ E + + A  L ++  
Sbjct: 521 IAQRLGLPSDVIADSQELAGGFSQDVNQ-----LIGELENQRREQEEKHKQAQDLLSKTE 575

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 636
             Y+E+E +A  L  R   LK+++ Q VQ+ L  AK QI  V+++ + +    + D   +
Sbjct: 576 RFYQEVEAKATSLQDRERDLKSQQEQAVQKMLLDAKSQIAQVIKELQKKGNPTAQDAQQA 635

Query: 637 ---LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 693
              L K  +  +  I ++ +            SS+ P+ GE+V + SLG + A V++V  
Sbjct: 636 RENLEKIGDRFLTPIQKSRK-----------KSSYKPKVGERVRILSLG-QTAEVLDVDE 683

Query: 694 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQV 736
             + +  ++G M++ +   +I  +   + +    P   ++++ 
Sbjct: 684 TAEQLSARFGMMKMVLPFTDIESLDGKRFEKETPPKTEVKQKT 726


>gi|427708044|ref|YP_007050421.1| MutS2 protein [Nostoc sp. PCC 7107]
 gi|427360549|gb|AFY43271.1| MutS2 protein [Nostoc sp. PCC 7107]
          Length = 796

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 239/722 (33%), Positives = 378/722 (52%), Gaps = 73/722 (10%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           QIP  +S+  S++LL QT     +    +  L    I+DI   +  A    +L+  E+ A
Sbjct: 36  QIPTSQSV--SEQLLAQTKEVYQLESRLATGLSFDGIQDIGDSIERAELRGILAGDELLA 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           +  TL    N+ + +        D+ +    L +L+ +     ELE++I  CID +  I+
Sbjct: 94  IATTLAGARNLRRVI--------DNQEDTPVLTDLVADLRTYPELEQEIHRCIDERG-IV 144

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRRSRMCVGIKAS 185
            DRAS+ L  IR + +R    L S + +    I QA    + + LIT+R  R  + +KAS
Sbjct: 145 ADRASQKLGEIRDDLRR----LRSQINQKLHNILQAKSNAVQEQLITQRGDRFVIPVKAS 200

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           HK  +P GI  + S+SG T ++EP   V   N   +    E AEE A+  +LT ++A   
Sbjct: 201 HKDAIP-GIVHDSSTSGVTLYVEPSSIVPMGNQLRQTLKREQAEEEAVRRILTEQVAAVT 259

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
            +++ L+  V  +DLA AR+ ++ W+    P   ++        + +  ++HPLL+    
Sbjct: 260 PDLERLLAIVTTLDLAAARSRYSYWLKANPPRFINREEQEI---VTLRQLRHPLLIWQQQ 316

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                                       +G S   +P+D+ +    +VV ITGPNTGGKT
Sbjct: 317 HE--------------------------QGHS--VIPVDLLISPHIKVVTITGPNTGGKT 348

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KTLGLA+LM+K GL++PA+    +PWFD ILADIGD QSL+Q+LSTFSGHI RI  I
Sbjct: 349 VTLKTLGLAALMAKVGLFIPAREPVEMPWFDQILADIGDEQSLQQSLSTFSGHIRRISRI 408

Query: 426 LELVSRE------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           L  +  E      SLVL+DE+G+GTDP+EG ALA ++LQ+L +   L + TTH+ +L  L
Sbjct: 409 LNALEHEVENQPNSLVLLDEVGAGTDPAEGSALAIALLQHLAEHAQLTIATTHFGELKAL 468

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
           K +D RFENA+ EF   TL PTYR+LWG  G SNAL IA  +G   ++++ A+  V    
Sbjct: 469 KYEDARFENASVEFDEATLSPTYRLLWGIPGRSNALAIALRLGLKPEVVENAKTQVGEAS 528

Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
            E  Q     +   L  +RR+ E++A  A  L  +   LY+E+ D+A  L+ R   L+  
Sbjct: 529 DEVNQ-----VIAGLEAQRRRQETKAAEAQKLLQQAERLYKEVSDKAASLEEREKSLRVS 583

Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
           +   VQQ +  AK +I  V++  +     A         +++ +A+  I + ++P    +
Sbjct: 584 QEVAVQQAIAQAKGEIAQVIRRLQQGTPTAQD------AQQATNALNQITQKYQP----A 633

Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
            +      F P+ G+++ +   G + A V+  P +D  + V++G M++ VK  +I  +  
Sbjct: 634 AAAKPKVGFMPKVGDRIRISQFG-QTAEVLTAPDEDGELNVRFGIMKMTVKLPDIESLDG 692

Query: 720 SK 721
            K
Sbjct: 693 QK 694


>gi|427731199|ref|YP_007077436.1| MutS2 family protein [Nostoc sp. PCC 7524]
 gi|427367118|gb|AFY49839.1| MutS2 family protein [Nostoc sp. PCC 7524]
          Length = 822

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 247/749 (32%), Positives = 383/749 (51%), Gaps = 101/749 (13%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           QIP  +++  S++LL QT     +    +  L    ++DI   L  A    +L+  E+ A
Sbjct: 36  QIPTSQAV--SEQLLAQTKEVYQLESRLTPGLSFEGVQDIGDSLERAELQGILAGDELLA 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  TL    N+ + +    +L         P+L EL+ +     ELE++I  CID +  +
Sbjct: 94  IATTLAGARNLRRIIDNQEDL---------PVLNELVADLRTYPELEQEIHRCIDERGQV 144

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRRSRMCVGIKA 184
             DRAS+ L  IR E +R    L S + +    I QA  G + + +IT+R  R  + +KA
Sbjct: 145 T-DRASQKLGEIRTELRR----LRSQITQKLQNILQAKSGAVQEQIITQRGDRFVIPVKA 199

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
             K  +P GI  + S+SGAT ++EP   V   N   +    E AEE AI  +LT +IA  
Sbjct: 200 PQKDAIP-GIVHDTSTSGATLYIEPNSIVPMGNQLRQTVRREQAEEEAIRRILTEQIAAV 258

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
           + +++ L+  V  +DLA ARA ++ W++   P   S+        I +  ++HPLL+   
Sbjct: 259 KPDLERLLAIVTTLDLATARARYSLWLNANPPRFISREEQEI---ITLRQLRHPLLV--- 312

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                      +P+                      +P+D+ +    +VV ITGPNTGGK
Sbjct: 313 ---WQQHHEQGHPV----------------------IPVDLLISPHIKVVTITGPNTGGK 347

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KTLGLA+LM+K GL++PA+    +PWF+ ILADIGD QSL+Q+LSTFSGHI RI  
Sbjct: 348 TVTLKTLGLAALMAKVGLFIPAREPVEMPWFEQILADIGDEQSLQQSLSTFSGHIRRISR 407

Query: 425 ILE--------------------------------LVSRESLVLIDEIGSGTDPSEGVAL 452
           IL                                 L +  SLVL+DE+G+GTDP+EG AL
Sbjct: 408 ILNALGTDDRGQVTGDREQVTGDRGEEFLLTPHSPLPTPHSLVLLDEVGAGTDPTEGSAL 467

Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
           A ++LQYL D   L + TTH+ +L  LK +D RFENA+ EF+  TL PTYR+LWG  G S
Sbjct: 468 AIALLQYLADHAQLTIATTHFGELKALKYEDARFENASVEFNEATLSPTYRLLWGIPGRS 527

Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 572
           NAL IA  +G   ++I++A+  V     E  Q     +   L ++RR+ E++A  A  L 
Sbjct: 528 NALAIALRLGLKPEVIEQAKTQVGEATDEVNQ-----VIAGLEDQRRRQETKAAEAQKLL 582

Query: 573 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 632
            +   LY+E+  +A  L+ R   L+A +   VQQ +  AK +I  V++    Q    +A 
Sbjct: 583 QQAERLYKEVSAKAAALEEREQSLRASQEVAVQQAIAQAKGEIAKVIRRL--QQGTPTAQ 640

Query: 633 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 692
           E     +++ +A+  I + ++P    +        F P+ G+++ +   G + A V+  P
Sbjct: 641 E----AQQATNALNQIAQTYQP----AAPPKPKVGFMPKVGDRIRLSKFG-QTAEVLTAP 691

Query: 693 GDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
            +D    V++G M++ VK  +I  +   K
Sbjct: 692 DEDGEFSVRFGIMKMMVKLEDIESLDGQK 720


>gi|37523206|ref|NP_926583.1| recombination and DNA strand exchange inhibitor protein
           [Gloeobacter violaceus PCC 7421]
 gi|35214209|dbj|BAC91578.1| glr3637 [Gloeobacter violaceus PCC 7421]
          Length = 790

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 248/730 (33%), Positives = 388/730 (53%), Gaps = 74/730 (10%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           +PF ++  E+++ L +   AL + +S P  L    + DIA  +  A  G LL+   + AV
Sbjct: 40  LPF-EARSEAERWLQRAEEALRLAESVPGGLAFDGVHDIASDVERAGRGGLLTGEALLAV 98

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
             TL A   + + + E +        +   L  L+       ELE++I  CID     + 
Sbjct: 99  ASTLAAARRLRRAIEEHS-------GQAEELALLVAEVRTFPELEQEIYRCID-DTGEVA 150

Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASH 186
           DRASE L  +R+  +R    L + +++   Q+ Q  A    + LIT+R  R  V +K SH
Sbjct: 151 DRASEKLRDLRSGHRR----LRAEIQRTLLQLLQRRANCFQESLITQRGERFVVPVKVSH 206

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           +  +P GI  + S+SG T F+EP   ++  N  V    +E  E   IL+ L A +A+   
Sbjct: 207 RDQVP-GIVHDSSASGQTLFVEPMAVIDTTNRLVEGMRAEQVEIERILAELAALVAERAT 265

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           E+ +L   ++++DLA ARA +A W+  V P          +    +  ++HPLL+     
Sbjct: 266 ELLHLHRVLVDLDLAAARARYASWLGAVRPRFG-------ERGCGLVQVRHPLLVWQE-- 316

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                     P+                      VP+D+ V+   R VVITGPNTGGKT 
Sbjct: 317 ----RHEQGTPV----------------------VPVDLPVDPAVRAVVITGPNTGGKTV 350

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KTLGL  LM++AGL++PA++   LPWFD +LADIGD QS+EQNLSTFSGHI RIV IL
Sbjct: 351 TLKTLGLVVLMAQAGLFVPARDPAVLPWFDRVLADIGDEQSIEQNLSTFSGHIRRIVRIL 410

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
             ++ ++LVL+DE+G+GTDP EG ALA ++L +L +R GL + TTHY +L  LK   + F
Sbjct: 411 AALTPDALVLLDEVGAGTDPQEGAALARALLVHLAERAGLVLATTHYGELKALKYTQSHF 470

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
           ENA+ EF L TL PTYR+LWG  G SNAL IA+ +G D +++  AQ  +     E  +  
Sbjct: 471 ENASVEFDLATLSPTYRLLWGIPGRSNALTIAERLGLDAQVVAVAQASLSEGDVELDR-- 528

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
              +  +L E+ +  E Q R+   L  E+  L  ++  +   LD R A L+A++ QQV++
Sbjct: 529 ---VIGALQEQLQIQEEQVRSTTRLRGEVERLQSDLLRQQVLLDAREAALRARQDQQVRE 585

Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            +  A+ ++  V++  +        D      +++  A+ A+ EA+  ++  + +E    
Sbjct: 586 VVAEARAEVAQVIRTLQR------GDATAQQAQQASEALKAVGEAYLGEESAAPAE---- 635

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
            + PQ G++V +  LG ++  V+  P + D V VQ G +++ V  + +R  P S    A 
Sbjct: 636 -YRPQPGDKVEIVPLG-QMGEVLSPPDNGDQVRVQVGILKLTVPASQLR-RPGSP---AT 689

Query: 727 NPAPRLRKQV 736
            P PR + +V
Sbjct: 690 RPKPRPQAEV 699


>gi|220908146|ref|YP_002483457.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
           sp. PCC 7425]
 gi|219864757|gb|ACL45096.1| MutS2 family protein [Cyanothece sp. PCC 7425]
          Length = 818

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 242/737 (32%), Positives = 382/737 (51%), Gaps = 82/737 (11%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQPLDLS--TIEDIAGILNSAVSGQLLSPSEICAV 68
           +P   S  ESQ L+ QT     +  + P  LS   I D+   L  A  G LL+  E+  +
Sbjct: 37  LPIPTSEAESQMLMQQTQEVYTLENASPTSLSFEGIYDLTHALERAGLGGLLTAVELSQI 96

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
             TL A  N+ + +           Q   PLL +L+       ELE++I  CID     +
Sbjct: 97  ASTLAAARNLRRTIER---------QPDCPLLSQLVTPLRTYPELEQEIHRCID-DAGEV 146

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
            DRAS  L  IR  +++  + +  +L+ +  +  +A  + + +IT+R  R  + +KA  K
Sbjct: 147 ADRASAKLTDIRDRQRQVRQQIQRILQDILQR--KANALQEAVITQRSDRFVIPVKAPQK 204

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +P GI  + SSSGAT ++EP+  +  NN   +L+  E  E  AIL  L+ ++   + +
Sbjct: 205 DAIP-GIVHDSSSSGATLYIEPQSTINLNNQLRQLARQEQTEVEAILRQLSQQVGAVQAD 263

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           ++ L+  V  +DLA AR+ ++ W++G  P       V  +  I +  ++HPLL+      
Sbjct: 264 LEQLLQIVTHLDLAAARSRYSTWLEGNRPHFIK---VHSNDKITLRQLRHPLLVWQQRHE 320

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
             A      P+                      VPID+ +  +TRVVV+TGPNTGGKTAS
Sbjct: 321 QGA------PV----------------------VPIDLSIHPQTRVVVMTGPNTGGKTAS 352

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KTLGL +LM+KAGL++PA+    LPWF+ ILADIGD QSL+Q+LSTFSGHI  I  IL+
Sbjct: 353 LKTLGLTALMAKAGLFIPAREPVELPWFEQILADIGDEQSLQQSLSTFSGHIRCISQILD 412

Query: 428 LVS-----------------------RESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
            +                         ++LVL+DE+G+GTDP+EG ALA ++L YL D  
Sbjct: 413 ALDDPNADPSASLMENGHDHISSDSLAQALVLLDEVGAGTDPTEGTALAIALLHYLADHT 472

Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
            L V TTH+ +L  LK +D RFENA+ EF   +L PTYR+LWG  G SNAL IA+ +G +
Sbjct: 473 YLTVATTHFGELKALKYQDQRFENASVEFDEASLAPTYRLLWGIPGRSNALAIARRLGLN 532

Query: 525 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 584
            +++  A+  +      R+    +++   L  +R++ E++++ AA L A+   L+RE+E 
Sbjct: 533 ERVLTAAETELG----GRKTEDVNQVIAGLEAQRKQQETRSQAAAELLAQTERLHRELEQ 588

Query: 585 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 644
           +A  L  R   L+ ++ Q VQQ +  AK ++  +++  +       A + +  + +    
Sbjct: 589 KAAQLQAREQTLRQQQEQTVQQAIATAKAEVARIIRQLQQGQTAQDAQQASQALDQ---- 644

Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
              +   + P      S      F PQ G++V + SLG + A V+  P  D  + V++G 
Sbjct: 645 ---VATEYLPSRKQPTSPPPKPGFRPQLGDRVRIPSLG-QTAEVITAPNVDGELTVRFGL 700

Query: 705 MRVRVKKNNIRPIPNSK 721
           M++ +    I  +   K
Sbjct: 701 MKMNLNLTEIESLTGEK 717


>gi|428770493|ref|YP_007162283.1| MutS2 protein [Cyanobacterium aponinum PCC 10605]
 gi|428684772|gb|AFZ54239.1| MutS2 protein [Cyanobacterium aponinum PCC 10605]
          Length = 803

 Score =  345 bits (884), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 241/747 (32%), Positives = 393/747 (52%), Gaps = 94/747 (12%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLS--TIEDIAGILNSAVSGQ 58
           +G    Q   IP   +L  ++ LL QT   + +      + S   I D+   +  A  G 
Sbjct: 27  LGAIASQNLTIP--STLAHTRLLLAQTQEVVTLETDINCNWSFQGIHDVGDGIERAKMGG 84

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           +LS  E+  +  TL  V  + + + +  +L          L EL+ N     ELE++I +
Sbjct: 85  MLSGEELLNLATTLAGVRKLRRIIDDKNDL--------ITLQELVANIRTFPELEQEIHY 136

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRS 176
           CID +  I  +RAS  L    AE ++ +++L S +++    I Q  G  + + +IT+R  
Sbjct: 137 CIDDRGEIT-ERASPQL----AEIRQKIKSLRSKIQQTLQGIIQRYGNALQELVITQRGD 191

Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
           R  + +KA H  ++  GI  + SS+G+T ++EPK  VE  N      N E  EE  IL  
Sbjct: 192 RFVLPVKADHSGII-TGIVHDTSSTGSTLYVEPKAVVELGNKLQTSRNQEKREEEKILRA 250

Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF--DSSINIEG 294
           L+ ++A++ ++++ L+     +DLA ARA ++ W+D   P       V F    SI +  
Sbjct: 251 LSEKVAENWQDLEELLAVATTLDLATARARYSLWLDAYPP-----EFVDFADGESITLRQ 305

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
           ++HPLL+                     E S++             +PID+++  ETRVV
Sbjct: 306 VRHPLLVWQERHE---------------EGSQV-------------IPIDVRISPETRVV 337

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
            ITGPNTGGKT ++KT+G+ +LM+K GL++PAK+  R+PWF+ +LADIGD QSL+Q+LST
Sbjct: 338 AITGPNTGGKTVTLKTIGMVALMAKVGLFIPAKSPARIPWFNNVLADIGDEQSLQQSLST 397

Query: 415 FSGHISRIVDIL-ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
           FSGHI RIV IL E+    SLVL+DE+G+GTDP+EG A+A SIL+YL     L + TTHY
Sbjct: 398 FSGHIRRIVRILDEIKENNSLVLLDEVGAGTDPNEGTAIAISILKYLASNNLLTIATTHY 457

Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
            +L  LK  D+RFENA+ EF   +L+PTYR+LWG  G SNA+ IA+ +G +  I+  A++
Sbjct: 458 GELKSLKYSDSRFENASVEFDDVSLQPTYRLLWGIPGRSNAITIAQRLGLNDDIVAEAKE 517

Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
           LV     +      +EL  +L ++R++ E + + A  L  +    Y+++E +A  L  R 
Sbjct: 518 LVGGFSAD-----VNELISALEKQRKEQEDKHQQAQDLLTKTELFYQQVEAKAISLQARE 572

Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
             LK ++ Q+V + L  AK QI+ V++  + +    + D                  AH+
Sbjct: 573 RDLKKEQEQEVHKLLLDAKSQINQVIKGLKQKGSPTAQD------------------AHQ 614

Query: 654 PDDDFSVSETNTSSFTP------------QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
             ++    +      TP            + GE+V + S+G ++A V+ V   ++ +  +
Sbjct: 615 ATENL--GKIGDRFLTPIQKSKSKSSYKPKVGERVRILSIG-QVAEVLGVDDSNEQISAR 671

Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANP 728
           +G M++ +  +++  +   + +    P
Sbjct: 672 FGLMKMVIPFSDLESLDGKRWEKPETP 698


>gi|282900091|ref|ZP_06308048.1| DNA mismatch repair protein [Cylindrospermopsis raciborskii CS-505]
 gi|281194973|gb|EFA69913.1| DNA mismatch repair protein [Cylindrospermopsis raciborskii CS-505]
          Length = 815

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 244/735 (33%), Positives = 378/735 (51%), Gaps = 80/735 (10%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           +P   +LEES+ LL QT   +  ++SQ    L    I+DI   L  A    LLS  E+ A
Sbjct: 35  LPIPSTLEESEGLLCQTKE-VYQLESQLISGLSFEGIQDIGDSLERAELHGLLSSEELLA 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           +  TL    N+ + +        D+ +    L +L+       ELE++I  CID +  I 
Sbjct: 94  IATTLAGARNLRRVI--------DNQEDLPILCDLVSQLRTYPELEQEIHHCIDERAQIA 145

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
            DRAS+ L  IR + ++    +   L  +     ++  + + +IT+R  R  + +KA  K
Sbjct: 146 -DRASQKLSEIREDLRKLRSQITQKLHNIIQ--VKSNALQELIITQRGDRYVLPVKAVQK 202

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +P GI  + S+SGAT ++EP   V   N   +    E  E  AIL +LT ++A+ + +
Sbjct: 203 DAVP-GIVHDSSTSGATLYIEPNSIVSMGNQLRQTLKREQVEIEAILRILTTKVAEVKPD 261

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS--INIEGIKHPLLLGSSL 305
           ++ L+  V  ID+A A+A ++ W++G  P L   S     SS  I +  ++HPLL+    
Sbjct: 262 LEKLLAIVTTIDVAAAKARYSLWIEGNPPRLIHPSIPGGSSSEIITLRQLRHPLLV---- 317

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                     +P+                      VP+D+ +    +VV ITGPNTGGKT
Sbjct: 318 --WQQKHEQGHPV----------------------VPVDLLISPHIKVVTITGPNTGGKT 353

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KTLGLA+LM+K GL++PA+    +PWF  +LADIGD QSL Q+LSTFSGHI RI  I
Sbjct: 354 VTLKTLGLAALMAKVGLFIPAREPVEIPWFSHVLADIGDEQSLAQSLSTFSGHIRRISRI 413

Query: 426 LELVSRE----------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
           L  +  E          SL+L+DE+G+GTDP+EG ALA ++L+YL D   L + TTH+ +
Sbjct: 414 LNAIGEERQSSPYQTSHSLILLDEVGAGTDPAEGSALAIALLKYLGDHAQLTIATTHFGE 473

Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           L  LK +D RFENA+ EF+  TL PTYR+LWG  G SNAL IA  +G   ++++ A+  +
Sbjct: 474 LKSLKYEDIRFENASVEFNETTLSPTYRLLWGIPGRSNALAIALRLGLKPEVVENAKSQL 533

Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
                E  Q     +   L  +RR  E++A  A  L  +   LY+E+   A  L+ R   
Sbjct: 534 GETTDEVNQ-----VIAGLEAQRRSQETKAAAAQELLKQTEKLYKEVSQRATALEEREKD 588

Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS-ADEINSLIKESESAIAAIVEAHRP 654
           L+A +   VQ+ +  AK +I  V++  +     A  A +   L+ E       I + ++P
Sbjct: 589 LRASQEIAVQKAITQAKGEIAQVIRQLQQGKPTAQDAQKATKLLTE-------IADKYQP 641

Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
                V +     F P+ GE+V +  LG + A V+     +  + V++G M++ V   ++
Sbjct: 642 VAPPKVKQ----GFIPEPGERVRIPKLG-QTAQVISAADGNGELTVRFGMMKMTVNLEDV 696

Query: 715 ------RPIPNSKRK 723
                 +P+  SK K
Sbjct: 697 ESLDGEKPLVPSKTK 711


>gi|86607201|ref|YP_475964.1| recombination and DNA strand exchange inhibitor protein
           [Synechococcus sp. JA-3-3Ab]
 gi|86555743|gb|ABD00701.1| MutS2 family protein [Synechococcus sp. JA-3-3Ab]
          Length = 799

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 240/716 (33%), Positives = 385/716 (53%), Gaps = 77/716 (10%)

Query: 15  KSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           +S  ES+  L+QT  A+ +  SQP  + L  I ++   L  A  G +LS  E+  +  TL
Sbjct: 57  RSRAESEVCLDQTEEAIRLDCSQPGGISLDGIHNLLPALERAERGGILSGEELVQIATTL 116

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
            A   + ++L +A E       R   L E + N     ELE++I  C+D +   + D AS
Sbjct: 117 GAARRL-RRLIDADE-------RLPRLQEWVSNLRTYPELEQEIFRCLD-EHGEVRDSAS 167

Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
             L  +R + ++    +   L++V +Q  QA  +   LI +R+ R  + +KA+H+ L+  
Sbjct: 168 AALADLRRQHRQYRSQIQERLQQVMSQHPQA--LQDTLIGQRQGRFVLMVKATHRDLI-R 224

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI-AEETAILSLLTAEIAKSEREIKYL 251
           GI  + S+SGAT ++EP   VE  N  +R + ++I AEE  IL+ L+A++     ++++L
Sbjct: 225 GIVHDSSASGATLYVEPYAVVELGN-RLRETQAQIQAEEERILAALSAQVGSVAEDLEHL 283

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
              ++ +++A ARA ++ W+ G  P           + + +   +HPLLL  S       
Sbjct: 284 QAVMVGLEVALARARYSLWLGGNRPQF-------VPAGLRLRQARHPLLLWQS------- 329

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
                  + + +  E+             +PID  +    R VVITGPNTGGKT ++KTL
Sbjct: 330 -------REEGKGPEV-------------IPIDFTLSESIRAVVITGPNTGGKTVALKTL 369

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
           GL  LM+KAG++LPA++ P+LPWFD + ADIGD QSL+Q+LSTFSGHI RI  I++ +  
Sbjct: 370 GLLVLMAKAGIFLPAQDPPQLPWFDGVYADIGDEQSLQQSLSTFSGHIRRISRIVQALQS 429

Query: 432 E---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
           E   +LVL+DE+G+GTDPSEG ALA  +L+YL ++  L + TTHY +L  LK +   FEN
Sbjct: 430 EPAPALVLLDEVGAGTDPSEGAALAAGLLEYLAEKALLTLATTHYGELKALKYQHPGFEN 489

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF   TL PTYR+LWG  G SNAL IA+ +  + +I++RAQ   + L+ E Q     
Sbjct: 490 ASVEFDEATLAPTYRLLWGIPGRSNALAIARRLHLEPEILRRAQ---QHLQGESQ---VD 543

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
           ++   L  +R +LE +A    SLH E+  LYR+++  ++ +  R A L+ ++ Q +Q  L
Sbjct: 544 KVIAGLEAQRAQLEERAAQVGSLHQELETLYRQMQQRSRQMAEREAQLEYRQQQGLQALL 603

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
             A+ ++   V+  +                +    +AA +E  R           T  F
Sbjct: 604 AAARREVAAAVRKLQQ--------------GDDPQQVAAELEQIRRRYSPPPPPVET-EF 648

Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
            P+ G++V ++ LG +   V+ V G  +  +V+ G ++  V +  + PI   + K 
Sbjct: 649 VPEVGDRVRLRGLG-QTGEVIAVEG--EVYVVRSGILKFTVPRGQLDPIDEHQAKQ 701


>gi|86609812|ref|YP_478574.1| recombination and DNA strand exchange inhibitor protein
           [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558354|gb|ABD03311.1| MutS2 family protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 805

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 245/718 (34%), Positives = 392/718 (54%), Gaps = 77/718 (10%)

Query: 15  KSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           +S  +S+  L QT  A+ + ++Q   L ++ I ++   L  A  G +LS  E+  +  TL
Sbjct: 59  QSRADSEAYLEQTEEAIRLDRTQAGGLSMAGIHNLLPALERAERGGILSGEELVQIATTL 118

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
            A   + ++L +    D D L R    +  L+      ELE++I  C++ +   + D AS
Sbjct: 119 GAARRI-RRLID----DHDHLPRLQTWVSTLRT---YPELEQEIFRCLE-EHGEVRDSAS 169

Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
             L  +R +++R    +   L+++ +Q  QA  +   LI +R+ R  + +KA+H+ L+  
Sbjct: 170 PTLADLRQQQRRQRSQIQEQLQQLMSQYPQA--LQDTLIGQRQGRFVLMVKATHRDLI-R 226

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI---AEETAILSLLTAEIAKSEREIK 249
           GI  + S+SGAT ++EP   VE  N   R   +++   AEE  IL+ L+A++A    +++
Sbjct: 227 GIVHDSSASGATLYVEPYAVVELGN---RWRETQVQIQAEEERILAALSAQVAAVATDLE 283

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
           +L   ++ +D+A AR  ++ W++G  P   S       + + +   KHPLLL    +S +
Sbjct: 284 HLQGVMVGLDVALARGRYSLWLEGNRPQFVS-------AGLRLRQAKHPLLL---WQSRA 333

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
           AA S                    +G     VPID  +    RVVVITGPNTGGKT ++K
Sbjct: 334 AAPS--------------------EGQGSAVVPIDFTLADSIRVVVITGPNTGGKTVALK 373

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH---ISRIVDIL 426
           TLGL  LM+KAG++LPA++ P+LPWFD + ADIGD QSL+QNLSTFSGH   ISRIV  L
Sbjct: 374 TLGLLVLMAKAGIFLPAQDPPQLPWFDGVYADIGDEQSLQQNLSTFSGHIRRISRIVQAL 433

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           +     +LVL+DE+G+GTDP+EG ALA  +L+YL +R  L + TTHY +L  LK +   F
Sbjct: 434 QSAPEPALVLLDEVGAGTDPTEGAALAAGLLEYLSERALLTLATTHYGELKALKYQHPCF 493

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
           ENA+ EF   TL PTYR+LWG  G SNAL IA+ +  D +I++RAQ+    L+ E Q  R
Sbjct: 494 ENASVEFDEVTLAPTYRLLWGIPGRSNALAIAQRLQLDPEILRRAQR---HLQGESQVDR 550

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
              +   L  +R +LE +A    SLH E+  LY++++  ++ +  R A L+ K+ Q++Q 
Sbjct: 551 ---VIAGLEAQRAQLEERAAQVGSLHRELESLYQQMQQRSRQIAEREARLEQKQNQELQA 607

Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            L  A+ ++   ++  +        ++   +  E    +A I + + P       E    
Sbjct: 608 LLAAARQEVAAAIRRLQQ------GEDPQRITAE----LAQIQQRYSPPPPPVDME---- 653

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
            F P+ G++V ++ LG +   V+ + G  D  +V+ G ++  V +  + PI   + K 
Sbjct: 654 -FVPEVGDRVRLRGLG-QTGEVIAIEG--DVYVVRSGILKFTVPRGQLDPIDEHQAKQ 707


>gi|282896735|ref|ZP_06304743.1| MutS 2 protein [Raphidiopsis brookii D9]
 gi|281198453|gb|EFA73341.1| MutS 2 protein [Raphidiopsis brookii D9]
          Length = 814

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 245/739 (33%), Positives = 379/739 (51%), Gaps = 89/739 (12%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           +P   +LEES+ LL QT   +  ++SQ    L    I+DI   L  A    LLS  E+ A
Sbjct: 35  LPIPSTLEESEGLLCQTKE-VYQLESQLISGLSFEGIQDIGDSLERAELHGLLSSEELLA 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           +  TL    N+ + +        D+ +    L +L+       ELE+++  CID +  I 
Sbjct: 94  IATTLAGARNLRRVI--------DNQEDLPILCDLVSQLRTYPELEQEVHHCIDERAQIA 145

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKAS 185
            DRAS+ L  IR     ++  L S + +    I Q  +  + + +IT+R  R  + +KA 
Sbjct: 146 -DRASQKLSEIR----EDLRKLRSQITQKLHNIIQVKSNALQELIITQRGDRYVLPVKAP 200

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
            K  +P GI  + S+SGAT ++EP   V   N   +    E  E  AIL +LT ++A+ +
Sbjct: 201 QKDAVP-GIVHDSSTSGATLYIEPNSIVSMGNQLRQTLKREQVEIEAILRILTTKVAEVK 259

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS----INIEGIKHPLLL 301
            +++ L+  V  ID+A A+A ++ W++G  P L    H S   S    I +  ++HPLL+
Sbjct: 260 PDLEKLLAIVTTIDVAAAKARYSLWIEGNPPRLI---HPSIPGSSSQIITLRQLRHPLLV 316

Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
                         +P+                      VP+D+ +    +VV +TGPNT
Sbjct: 317 ------WQQKHEQGHPV----------------------VPVDLLISPHIKVVTMTGPNT 348

Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
           GGKT ++KTLGLA+LM+K GL++PA+    +PWF  +LADIGD QSL Q+LSTFSGHI R
Sbjct: 349 GGKTVTLKTLGLAALMAKVGLFIPAREPVEIPWFSQVLADIGDEQSLAQSLSTFSGHIRR 408

Query: 422 IVDILELVSRE----------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           I  IL  +  E          SL+L+DE+G+GTDP+EG ALA ++L+YL D   L + TT
Sbjct: 409 ISRILNAIGEEIQSSPYQTSHSLILLDEVGAGTDPAEGSALAIALLKYLGDHAQLTIATT 468

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           H+ +L  LK +D RFENA+ EF+  TL PTYR+LWG  G SNAL IA  +G   ++++ A
Sbjct: 469 HFGELKSLKYEDIRFENASVEFNETTLSPTYRLLWGIPGRSNALAIALRLGLKPEVVENA 528

Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
           +  +     E  Q     +   L  +RR  E++A  A  L  +   LY+E+   A  L+ 
Sbjct: 529 KSQLGGTTDEVNQ-----VIAGLEAQRRSQETKAAAAQELLKQTEKLYKEVSQRATALEE 583

Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS-ADEINSLIKESESAIAAIVE 650
           R   L+A +   VQ+ +  AK +I  V++  +     A  A +   L+ E       I +
Sbjct: 584 REKDLRASQEIAVQKAITQAKGEIAQVIRQLQQGKPTAQDAQKATKLLTE-------IAD 636

Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
            ++P     V +     F P+ GE+V +  LG + A V+     +  + V++G M++ V 
Sbjct: 637 KYQPAAPPKVKQ----GFIPEPGERVRIPKLG-QTAQVISAADGNGELTVRFGMMKMTVN 691

Query: 711 KNNI------RPIPNSKRK 723
             ++      +P+  SK K
Sbjct: 692 LEDVESLDGEKPLVPSKTK 710


>gi|434407615|ref|YP_007150500.1| MutS2 family protein [Cylindrospermum stagnale PCC 7417]
 gi|428261870|gb|AFZ27820.1| MutS2 family protein [Cylindrospermum stagnale PCC 7417]
          Length = 814

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 243/755 (32%), Positives = 382/755 (50%), Gaps = 103/755 (13%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
           +G    ++ +IP  +S  ES++LL QT     +    +  L    I+DI   L  A    
Sbjct: 27  LGAIAARQLKIP--ESQAESEQLLAQTKEVYQLESRLTPGLSFEGIQDIGDSLERAERSG 84

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIG 117
           +L+  E+ A+  TL    N+ + +    +L         P+L EL+ +     ELE++I 
Sbjct: 85  ILTGDELLAIATTLAGARNLRRVIDNQEDL---------PILNELVADLRTYPELEQEIH 135

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRR 175
            CID +  +  DRAS+ L  IR + +R    L S + +    I QA  G + + LIT+R 
Sbjct: 136 RCIDERAQVT-DRASQKLGEIRLDLRR----LRSQITQKLQNIIQAKSGAVQEQLITQRG 190

Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
            R  + +KA  K  +P GI  + S+SGAT ++EP   V   N   ++   E  EE AI  
Sbjct: 191 DRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPHSVVPIGNQLRQVIRKEQTEEEAIRR 249

Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
            LT ++A  + +++ L+     +DLA A++ ++ W+    P    +        IN+  +
Sbjct: 250 ALTEQVAAVKPDLERLLAIATSLDLATAKSRYSFWIGANPPRFIQRQDQEI---INLRHL 306

Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
           +HPLL+               P+                      VP+D+ +  + RVV 
Sbjct: 307 RHPLLVWQQ------QHEQGQPV----------------------VPVDLFISPQIRVVT 338

Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
           ITGPNTGGKT ++KTLGLA+LM+K GL++PA+    +PWFD +LADIGD QSL+Q+LSTF
Sbjct: 339 ITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEIPWFDKVLADIGDEQSLQQSLSTF 398

Query: 416 SGHISRIVDILE------------------------LVSRESLVLIDEIGSGTDPSEGVA 451
           SGHI RI  ILE                        L   +SLVL+DE+G+GTDP EG A
Sbjct: 399 SGHIRRISRILEALGDNSSVTGNEEDSEQLPITHYPLPITKSLVLLDEVGAGTDPVEGSA 458

Query: 452 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 511
           LA ++LQYL +   L + TTH+ +L  LK ++ RFENA+ EF   TL PTYR+LWG  G 
Sbjct: 459 LAIALLQYLANHAQLTIATTHFGELKALKYENERFENASVEFDESTLSPTYRLLWGIPGR 518

Query: 512 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
           SNAL IA  +G   ++I++A+  V     E      + +   L  +RR+ E++A  A  L
Sbjct: 519 SNALTIALRLGLKPEVIEQAKTQVGEATDE-----VNLVIAGLEAQRRRQETKAAEAQDL 573

Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-----QL 626
             +   LY+E+  +A DL  R   L+  +   VQQ +  AK +I  V++  +      Q 
Sbjct: 574 LRQAEILYKEVSAKAADLQEREKALRVSQEVAVQQAIASAKSEIAQVIRRLQQGTPTAQE 633

Query: 627 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 686
              + + +N + ++S+ A         P     +      +F P+ G+++ +  LG + A
Sbjct: 634 AQQATNALNQIAQKSQPA---------PPPKAKI------AFMPKVGDRIRIPKLG-QTA 677

Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
            V+  P +D  + V++G M++ V+  ++  +   K
Sbjct: 678 EVLTAPDEDGELTVRFGIMKMMVQLADVESLDGQK 712


>gi|428317789|ref|YP_007115671.1| MutS2 protein [Oscillatoria nigro-viridis PCC 7112]
 gi|428241469|gb|AFZ07255.1| MutS2 protein [Oscillatoria nigro-viridis PCC 7112]
          Length = 874

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 242/740 (32%), Positives = 373/740 (50%), Gaps = 80/740 (10%)

Query: 18  EESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
           +E+ +L N+   AL+           I+DI   L  A    LLS  E+ A+  TL     
Sbjct: 61  QEAYQLENRAGGALS--------FEGIQDIGTSLQRAELQGLLSGEELLAIATTLAGARQ 112

Query: 78  VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           + + +        DS      L EL        ELE++I  CID +  +  DRA+  L  
Sbjct: 113 LRRII--------DSQPDVPTLQELAAQLRTYPELEQEIHRCIDDRAQVA-DRATPKLAG 163

Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
           IR + ++  + +  +L+ +  +  Q+  + + LIT+R  R  + +KA  K  +P GI  +
Sbjct: 164 IRVQMRQLRDRIYQILQGILQR--QSNAVQEQLITQRSGRFVIPVKAPQKDAIP-GIVHD 220

Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
            S+SGAT ++EP   V  NN   +L   E AEE A+   LT ++A  + ++  L+  V  
Sbjct: 221 SSASGATLYVEPHSTVNLNNQMRQLLRQEQAEEEAVRRALTEQVAAVKPDLDRLVVVVTT 280

Query: 258 IDLAFARAGFAQWMDGVCP---------ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           +DLA A+A ++ W+    P         +         +   + E  ++  LL  +LRS 
Sbjct: 281 LDLATAKARYSYWLQANPPKFIELGEPELAPKNPETEDEEKADEENSENSQLLIPNLRSQ 340

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPV-PIDIKVECETRVVVITGPNTGGKTAS 367
                  +PL    +  E            FPV P+D+ +    RVV ITGPNTGGKT +
Sbjct: 341 ITLRQLRHPLLVWQQQHE----------QGFPVVPVDLTIGPHIRVVAITGPNTGGKTVT 390

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KTLGLA+LM+KAG+++ A+    LPWFD ILADIGD QSL+Q+LSTFSGHI RI  ILE
Sbjct: 391 LKTLGLAALMAKAGMFVAAREPVELPWFDNILADIGDEQSLQQSLSTFSGHIRRISRILE 450

Query: 428 LVSR--------------------------ESLVLIDEIGSGTDPSEGVALATSILQYLR 461
           ++                            +SLVL+DE+G+GTDPSEG ALA ++L+YL 
Sbjct: 451 VLHNKSEGESAGEGEENSQFPMPHAQFPMPKSLVLLDEVGAGTDPSEGSALAIALLKYLA 510

Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
               L V TTH+ +L  LK +D+RFENA+ EF   +++PTYR+LWG  G SNAL IAK +
Sbjct: 511 QHSLLTVATTHFGELKALKYQDSRFENASVEFDDNSMQPTYRLLWGIPGRSNALTIAKRL 570

Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
           G   +I++ AQ  V     +  Q     +   L  +RRK E++AR A  L  +   L+RE
Sbjct: 571 GLLPEIVEEAQTYVGGASQDVNQ-----VIAGLEAQRRKQETKAREATQLLHQTEKLHRE 625

Query: 582 IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKES 641
           +  +A  L  R   LK  +   V + +  AK +I  +++  +      S ++     +++
Sbjct: 626 VSQKAAALQERERELKIAQEVAVNEAIGSAKSEIAQIIRRLQ------SGNQTAQNAQQA 679

Query: 642 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
              +  I + H P             F P+ G+++ + SLG + A V+  P  ++ + V+
Sbjct: 680 TETLNQISQKHLPSRQQPAKP--KPGFMPKAGDRIRIPSLG-QTAEVLSGPDANEELSVR 736

Query: 702 YGKMRVRVKKNNIRPIPNSK 721
           +G M++ VK   I  +   K
Sbjct: 737 FGIMKMTVKLGEIESLDGQK 756


>gi|161353751|ref|NP_484093.2| recombination and DNA strand exchange inhibitor protein [Nostoc sp.
           PCC 7120]
          Length = 798

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 238/730 (32%), Positives = 374/730 (51%), Gaps = 77/730 (10%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           QIP  ++   S++LL QT     +    +  L    I DI   L  +    +L   E+ A
Sbjct: 36  QIPASQA--ASEQLLEQTKEVYQLESRLASGLSFEGIHDIGDALERSELQGILGGDELLA 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           +  TL    N+ + +        D+ +    L EL+       ELE++I  CID +  + 
Sbjct: 94  IATTLAGARNLRRII--------DNQEDIPILTELVAELRTYPELEQEIHRCIDERGQVT 145

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
            DRAS  L  IR E ++    +   L+ +     ++  + + LIT+R  R  + +KA  K
Sbjct: 146 -DRASTKLGDIRTELRKLRSQITQKLQNILQ--VKSNAVQEQLITQRGDRFVIPVKAPQK 202

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +P GI  + S+SGAT ++EP   V   N   +    E AEE AI   LT ++A  + +
Sbjct: 203 DAIP-GIVHDTSTSGATLYIEPNSVVPMGNQLRQTIRKEQAEEEAIRRALTEKVAAVKPD 261

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           ++ L+  V  +D+A ARA ++ W+    P    +        I +  + HPLL+      
Sbjct: 262 LERLLAIVTTLDMATARARYSLWLKANPPRFIDRQEQEI---ITLRQLHHPLLVWQQQHE 318

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
              A                             +P+D+ +    RVV ITGPNTGGKT +
Sbjct: 319 QGHAV----------------------------IPVDLLISPHIRVVTITGPNTGGKTVT 350

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL- 426
           +KTLGLA+LM+K GL++PA+    +PWFD +LADIGD QSL+Q+LSTFSGHI RI  IL 
Sbjct: 351 LKTLGLAALMAKVGLFVPAREPVEMPWFDQVLADIGDEQSLQQSLSTFSGHIRRISRILN 410

Query: 427 -------ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
                  +L +  SLVL+DE+G+GTDP+EG ALA ++LQYL D   L V TTH+ +L  L
Sbjct: 411 ALGTGEQDLETPNSLVLLDEVGAGTDPAEGSALAIALLQYLADHAQLTVATTHFGELKAL 470

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
           K +D RFENA+ EF   TL PTYR+LWG  G SNAL IA  +G   +++++A+  V    
Sbjct: 471 KYEDQRFENASVEFDDATLSPTYRLLWGIPGRSNALAIALRLGLKAEVVEQAKTQVGEAT 530

Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
            E      + +   L  +RR+ E++A  A  +  +   LY+E+ ++A  L  R   LKA 
Sbjct: 531 DE-----VNLVIAGLEAQRRRQETKAAEAQKILQQAERLYKEVSNKAAALQEREQSLKAS 585

Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
           +   VQQ +  AK +I  V++    +L+  +A   ++  +++ + +  I + ++     +
Sbjct: 586 QEIAVQQAITQAKGEIAKVIR----RLQQGTATAQDA--QQATNNLHQIAQKYQ----PA 635

Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI----- 714
                   F P+ G+++ +   G + A V+  P +D  + V++G M++ VK  +I     
Sbjct: 636 PPPKAKPGFVPKVGDRIRISQFG-QTADVLTAPDEDGELTVRFGIMKMTVKLEDIESLDG 694

Query: 715 -RPIPNSKRK 723
            +P P +K K
Sbjct: 695 QKPEPITKAK 704


>gi|22300014|ref|NP_683261.1| recombination and DNA strand exchange inhibitor protein
           [Thermosynechococcus elongatus BP-1]
 gi|22296199|dbj|BAC10023.1| DNA mismatch repair protein [Thermosynechococcus elongatus BP-1]
          Length = 811

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 237/707 (33%), Positives = 381/707 (53%), Gaps = 72/707 (10%)

Query: 13  FGKSLEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
            G +   SQ LL QT+  +A+  +    LD S + DI   L        L  +E+ A+  
Sbjct: 63  LGGTQAASQVLLAQTAEVIALETVHQVRLDFSQVTDIEPALARLDHQGCLQGTELLAIAH 122

Query: 71  TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
            L       +++ E  +L        S L +L+       E+ ++I  CI  +  +  DR
Sbjct: 123 LLSTARQQRRQIEEHGQL--------SELQQLVAGVRTYPEVTQEIYRCITDQGQVS-DR 173

Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           AS   EL +  +++         +       +AG I +P++T+RR R  + +KA+HK  +
Sbjct: 174 ASP--ELAQIRQQQRQCRAQIQQQLQQILQQRAGAIQEPVVTQRRDRYVLAVKATHKDQI 231

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  ++S+SGAT ++EP+  ++  N   +L++ E   E AI   L+ ++A    ++ Y
Sbjct: 232 V-GIVHDLSASGATLYIEPQETIDLQNRLQQLAHQEAEVERAICQALSDQLATISDDLWY 290

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
           L+D +  +D+A ARA ++ W+ G  P   SQ+       ++++ ++HPLL+         
Sbjct: 291 LLDVLTTLDVAVARARYSLWLQGNPPQFVSQTR------LHLKALRHPLLVWQE------ 338

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P+                      VPIDI+++  T+VV ITGPNTGGKTA++KT
Sbjct: 339 HHEQGQPV----------------------VPIDIELQPATKVVTITGPNTGGKTATLKT 376

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL---E 427
           LGLA+LM+KAGLY+PA     LPWF  I ADIGD QSL QNLSTFS HI  I DIL   E
Sbjct: 377 LGLAALMAKAGLYVPAAAPVELPWFTGIWADIGDEQSLTQNLSTFSSHICNIRDILTELE 436

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
           +    +LVL+DE+G+GTDPSEG ALA ++L+YL +   L   TTHY +L  LK +D+RFE
Sbjct: 437 VTGGNTLVLLDEVGAGTDPSEGTALAIALLRYLAEHASLTFATTHYGELKALKYQDSRFE 496

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NA+ EF  ETL PTYR+LWG  G SNAL IA+ +G    I++ A+ L+      +  +  
Sbjct: 497 NASVEFDEETLAPTYRLLWGIPGQSNALAIAQRLGLYPSIVEEAKALL-----SKDSNSV 551

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
           +E+   L+ +R+  E++   AA+L  +   LY+EI   A++L +R   L+ ++ +QV+  
Sbjct: 552 NEMIMGLVAQRQAQEAKTTAAATLLRDTEALYQEIATRAQELRQRQQQLRQQQEEQVRTA 611

Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
           L+ A+ +I  ++     QL+ A++ E    ++ +++A+A I   + P           + 
Sbjct: 612 LHQAQQEIAKII----AQLQRANSPE---QVQAAQTALAQIENNYLPPP-------QPAG 657

Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
           F PQ G++V ++    ++  V+ V    D ++VQ G ++  V  + +
Sbjct: 658 FIPQPGDRVRLRQW-QQVGEVLSVSQQGD-IVVQVGAVKFTVPPHAV 702


>gi|354567326|ref|ZP_08986495.1| MutS2 protein [Fischerella sp. JSC-11]
 gi|353542598|gb|EHC12059.1| MutS2 protein [Fischerella sp. JSC-11]
          Length = 828

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 243/772 (31%), Positives = 381/772 (49%), Gaps = 120/772 (15%)

Query: 19  ESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           ES+ LL QT     +    +  L    I+DI   L  A    +L+  E+ A+  TL    
Sbjct: 43  ESEYLLTQTKEVYELESRLTTGLSFEGIQDIGDSLERAELQGVLAGEELLAIATTLAGSR 102

Query: 77  NVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
           N+ + +    +L         P+L EL+       ELE++I  CID +  +  DRAS+ L
Sbjct: 103 NLRRIIDNQPDL---------PILTELVAELRTYPELEQEIHRCIDERGQVS-DRASQKL 152

Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
             IR E ++    +   L  +     ++  + + +IT+R  R  + +KA  K  +P GI 
Sbjct: 153 ADIRTELRKLRNQITQKLHNIIQ--VKSNAVQEQIITQRGDRYVIPVKAPQKDAIP-GIV 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
            + S+SGAT ++EP   V   N   +L   E AEE AI   LT ++A+ + +++ L+   
Sbjct: 210 HDTSASGATLYIEPNSIVPLGNQLRQLVRREQAEEEAIRRALTEQVAEVKPDLEKLLAIT 269

Query: 256 LEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
             +DLA A+A ++ W+    P  ++ Q+    +  I +  ++HPLL+         A   
Sbjct: 270 TTLDLATAKARYSFWLQANPPRFINRQT----NEYITLRQLRHPLLVWQQQHEQGQAV-- 323

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
                                     VP+D+ V+ E +VV ITGPNTGGKT ++KTLGLA
Sbjct: 324 --------------------------VPVDLLVQPEIKVVTITGPNTGGKTVTLKTLGLA 357

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE-- 432
           +LM+K GL++PA+    LPWFD +LADIGD QSL+QNLSTFSGHI RI  ILE + +   
Sbjct: 358 ALMAKVGLFVPAREPVELPWFDQVLADIGDEQSLQQNLSTFSGHIRRISRILEAIDKPLD 417

Query: 433 -----------------------------------SLVLIDEIGSGTDPSEGVALATSIL 457
                                              +LVL+DE+G+GTDP+EG ALA ++L
Sbjct: 418 GELGAPTTDREWGLGAMGRLGDGEKDCTPPHHQSFALVLLDEVGAGTDPAEGSALAIALL 477

Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
           +YL D   L + TTH+ +L  LK +D RFENA+ EF   TL PTYR+LWG  G SNAL I
Sbjct: 478 RYLADHAQLTMATTHFGELKALKYQDERFENASVEFDEATLSPTYRLLWGIPGRSNALAI 537

Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 577
           A+ +G   ++I++A+  +     E  Q     +   L  +RR+ E++A  A  L  +   
Sbjct: 538 ARRLGLKAEVIEQAKTNLGGSTDEVNQ-----VIAGLEAQRRRQETKAAQAQDLLQQAER 592

Query: 578 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL 637
           LY+E+  +A +L  R   L+A +   VQQ +  A+ +I  V++  +     A        
Sbjct: 593 LYKEVSAKAANLQEREQTLRASQEIAVQQAIAQARSEIAQVIRRLQQGTPTA-------- 644

Query: 638 IKESESAIAAIVEAHRPDDDF--SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
            K+++ A  A+   H+  + F           + P+ G+++ +  LG + A V+  P +D
Sbjct: 645 -KDAQQATNAL---HQIAEKFIPQPPPKPKQGYIPKEGDRIRIPKLG-QTAEVLTAPDED 699

Query: 696 DTVLVQYGKMRVRVKKNNI--------------RPIPNSKRKNAANPAPRLR 733
             + V++G M++ VK  ++              +P P +       PAP +R
Sbjct: 700 GELTVRFGIMKMTVKLEDVESLDGKKAEPVAKAKPTPAATPVTPTQPAPAIR 751


>gi|75908863|ref|YP_323159.1| recombination and DNA strand exchange inhibitor protein [Anabaena
           variabilis ATCC 29413]
 gi|75702588|gb|ABA22264.1| MutS 2 protein [Anabaena variabilis ATCC 29413]
          Length = 798

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 234/722 (32%), Positives = 371/722 (51%), Gaps = 71/722 (9%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           QIP  ++   S++LL QT     +    +  L    I+DI   L  +    +L+  E+ A
Sbjct: 36  QIPASQA--ASEQLLEQTKEVYQLESRLASGLSFEGIQDIGDSLERSELQGILAGDELLA 93

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           +  TL    N+ + +        D+ +    L EL+       ELE++I  CID +  + 
Sbjct: 94  IATTLAGARNLRRII--------DNQEDIPILTELVAELRTYPELEQEIHRCIDERGQVT 145

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
            DRAS  L  IR E ++    +   L+ +     ++  + + LIT+R  R  + +KA  K
Sbjct: 146 -DRASTKLGDIRTELRKLRSQITQKLQNILQ--VKSNAVQEQLITQRGDRFVIPVKAPQK 202

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +P GI  + S+SGAT ++EP   V   N   +    E AEE AI   LT ++A  + +
Sbjct: 203 DAIP-GIVHDTSTSGATLYIEPNSVVPMGNQLRQTIRKEQAEEEAIRRALTEKVAAVKPD 261

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           ++ L+  V  +D+A ARA ++ W+    P    +        I +  + HPLL+      
Sbjct: 262 LERLLAIVTTLDMATARARYSLWLKANPPRFIDRQEQEI---ITLRQLHHPLLVWQQQHE 318

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
              A                             +P+D+ +    RVV ITGPNTGGKT +
Sbjct: 319 QGHAV----------------------------IPVDLLISPHIRVVTITGPNTGGKTVT 350

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL- 426
           +KTLGLA+LM+K GL++PA+    +PWFD +LADIGD QSL+Q+LSTFSGHI RI  IL 
Sbjct: 351 LKTLGLAALMAKVGLFVPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRISRILN 410

Query: 427 -------ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
                  E    +SLVL+DE+G+GTDP+EG ALA ++LQYL D   L V TTH+ +L  L
Sbjct: 411 ALGTGDKEEYRPQSLVLLDEVGAGTDPAEGSALAIALLQYLADHAQLTVATTHFGELKAL 470

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
           K +D RFENA+ EF   TL PTYR+LWG  G SNAL IA  +G   +++++A+  V    
Sbjct: 471 KYEDQRFENASVEFDDATLSPTYRLLWGIPGRSNALAIALRLGLKAEVVEQAKTQVGEAT 530

Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
            E      + +   L  +RR+ E++A  A  +  +   LY+E+ ++A  L  R   L+A 
Sbjct: 531 DE-----VNLVIAGLEAQRRRQETKAAEAQKILQQAERLYKEVSNKAAALQEREQSLRAS 585

Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
           +   VQQ +  AK +I  V++    +L+  +A   ++  +++ + +  I + ++     +
Sbjct: 586 QEVAVQQAITQAKGEIAKVIR----RLQQGTATAQDA--QQATNNLNQIAQKYQ----PA 635

Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
                   F P+ G+++ +   G + A V+  P +D  + V++G M++ VK  +I  +  
Sbjct: 636 PPPKAKPGFVPKIGDRIRISQFG-QTADVLTAPDEDGELTVRFGIMKMTVKLEDIESLDG 694

Query: 720 SK 721
            K
Sbjct: 695 QK 696


>gi|298491014|ref|YP_003721191.1| MutS2 family protein ['Nostoc azollae' 0708]
 gi|298232932|gb|ADI64068.1| MutS2 family protein ['Nostoc azollae' 0708]
          Length = 825

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 244/769 (31%), Positives = 384/769 (49%), Gaps = 106/769 (13%)

Query: 4   AVVQKAQIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           A+V +A +P   +LEES++LL QT     L  + ++ L    I+DI   L  A    +LS
Sbjct: 29  AIVARA-LPIPTTLEESKELLAQTKEVYQLESLLTKGLSFEGIQDIGDSLERAELQGILS 87

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
             E+ A+  TL    N+ + +        D+ +      EL+       ELE++I  CID
Sbjct: 88  GEELLAIATTLAGARNLRRLI--------DNQEDIPIFAELVAELRTYPELEQEIHRCID 139

Query: 122 CKLLIILDRASEDL----ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
            +  +  DRAS+ L    E +R  R +  + L ++++       ++G + +P+IT+R SR
Sbjct: 140 ERAQVT-DRASQKLGEIREYLRKSRGQITQKLHNIIQA------KSGALQEPIITQRGSR 192

Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
             + +KA  K  +P GI  + S+SGAT ++EP   V   N   +    E AEE AI   L
Sbjct: 193 YVIPVKAPQKDAVP-GIVHDTSTSGATLYIEPNSIVSMGNQLRQAIRREQAEEEAIRRSL 251

Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
           T ++A  + +++ L+  V  +D+A A+A ++ W+    P   ++        I +  ++H
Sbjct: 252 TEQVAAVKPDLEKLLAIVTTLDIATAKARYSFWIGANPPRFVNRQEQQI---ITLRQLRH 308

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
           PLL+              +P+                      +P+D+ +    +VV IT
Sbjct: 309 PLLV------WQQHHEQGHPV----------------------IPVDLLISPHIKVVTIT 340

Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
           GPNTGGKT +++TLGLA+LM+K GL++PA+    +PWFD +LADIGD QSL+Q+LSTFSG
Sbjct: 341 GPNTGGKTVTLRTLGLAALMAKVGLFVPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSG 400

Query: 418 HISRIVDILELVSR------------------------------------ESLVLIDEIG 441
           HI RI  IL  +                                       SLVL+DE+G
Sbjct: 401 HIRRISRILNALGTGDRGVGTRDWEMGEMRGDGGDGEGIFLMPNAQCTMPNSLVLLDEVG 460

Query: 442 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 501
           +GTDP EG ALA ++LQYL D   L + TTH+ +L  LK +D RFENA+ EF+  TL PT
Sbjct: 461 AGTDPVEGSALAIALLQYLADHAQLTIATTHFGELKALKYEDIRFENASVEFNDATLSPT 520

Query: 502 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 561
           YR+LWG  G SNAL IA  +G   ++++ A+  V     E  Q     +   L  +RR  
Sbjct: 521 YRLLWGIPGRSNALAIALRLGLKPEVVEAAKSQVGEATDEVNQ-----VIAGLEAQRRSQ 575

Query: 562 ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQD 621
           E++A  A  L  +   LY+E+  +A  L  R   L+A +   VQQ +  AK +I  V++ 
Sbjct: 576 ETKAAEAQELLRQAEKLYKEVSQKATALQEREKDLRASQEVAVQQAIIQAKGEIAEVIRR 635

Query: 622 FENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 681
            +     A         +E+ S ++ I E ++     +        F P+ G+++ ++ L
Sbjct: 636 LQQGKPTAQH------AQEATSKLSEIAERYQ----PTPPPKPKPGFMPKVGDRIRIRKL 685

Query: 682 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
           G + A V+  P  D    V++G M++ V+  +I  +   K +  A P P
Sbjct: 686 G-QTAEVLTAPNTDGEFSVRFGIMKMMVQLQDIESLEGQKPEPIAKPKP 733


>gi|443318566|ref|ZP_21047815.1| MutS2 family protein [Leptolyngbya sp. PCC 6406]
 gi|442781831|gb|ELR91922.1| MutS2 family protein [Leptolyngbya sp. PCC 6406]
          Length = 786

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 254/716 (35%), Positives = 381/716 (53%), Gaps = 66/716 (9%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           Q+P   +  ES+ LL QT  A  +    P L  + I+DI   L  AV   LL   E+ A+
Sbjct: 34  QLPLPTTQAESEGLLAQTREATQLETRPPGLKFAGIQDIGESLERAVRQGLLGGEELLAI 93

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLII 127
             T+    N  ++L  A  +DG   Q   P+L+ L+ +     ELE+ I  CID +  + 
Sbjct: 94  ATTV----NGARQLRRA--IDG---QDAVPVLQGLVADLRTYPELEQSIHHCIDDRAQVT 144

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
            DRAS  L  +R + K+    + + L+++  +  Q+G I + +IT+R  R  + +KA  K
Sbjct: 145 -DRASPKLGGLRTQIKQCRSEIYAKLQRILQR--QSGAIQEAVITQRGDRFVIPVKAPQK 201

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +P GI  + S+SGAT ++EP   VE  N   +L   E  EE AI   LTA++A    +
Sbjct: 202 DAIP-GIVHDASTSGATLYVEPHSIVEMGNRLRQLQRQEKTEEEAICRALTAQVAAVATD 260

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           ++ L+  V  +DLA ARA +  W+ G  P       ++      +  ++HPLL       
Sbjct: 261 LERLLAIVTALDLAAARARYGLWLQGNAP-----QFITPGEQTTLRHLRHPLLW------ 309

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                 + +    +V                  VPID+ V    RVV ITGPNTGGKT +
Sbjct: 310 ----WQHHHEAGPEV------------------VPIDVVVNPRLRVVAITGPNTGGKTVT 347

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KTLGLA+LM+KAG+Y+PAK    LPWFD +LADIGD QS+EQ+LSTFSGHI RI  +L 
Sbjct: 348 LKTLGLAALMAKAGMYVPAKEPVELPWFDQVLADIGDEQSIEQSLSTFSGHIKRISRVLA 407

Query: 428 LVSRE--SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
            +  E  +LVL+DE+G+GTDPSEG ALA ++L+YL D+    V TTHY +L  LK +D R
Sbjct: 408 ALETEGNALVLLDEVGAGTDPSEGSALAIALLRYLADQARFTVATTHYGELKALKYQDDR 467

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
           FENA+ EF   TL PTYR+LWG  G SNAL IA+ +G   +I+ +AQ  V          
Sbjct: 468 FENASVEFDENTLSPTYRLLWGIPGRSNALTIARRLGLAAEIVDQAQNYVGL----GSGQ 523

Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
             +++   L  +R++ E++A  AA+L AE   L+ E+  +A  L  R   L+ ++   VQ
Sbjct: 524 DVNQVIAGLEAQRQQQETKAAAAAALLAETEKLHAEVSRKAAFLKERERELQQQQQAAVQ 583

Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 665
             +  A+ +I  V++  +        +      +++ +A+AAI   HRP           
Sbjct: 584 AAVTEARAEIAQVIRRLQQ------GEPTAQSAQKATAAVAAIAARHRP-----APPPKP 632

Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
             F P+ G+++ + SLG + A V+  P  D    V++G M++ V   ++  +   K
Sbjct: 633 VGFRPRVGDRLRIPSLG-QTAEVLTDPDGDGKFAVRFGIMKMTVSLEDVESLQGEK 687


>gi|427721207|ref|YP_007069201.1| MutS2 protein [Calothrix sp. PCC 7507]
 gi|427353643|gb|AFY36367.1| MutS2 protein [Calothrix sp. PCC 7507]
          Length = 828

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 249/763 (32%), Positives = 377/763 (49%), Gaps = 106/763 (13%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
           +G    +  QIP   S  ES +LL QT     +    +  L    I+DI   L  A    
Sbjct: 27  LGAIASRHLQIP--DSQAESIQLLEQTKEVYQLENRLTTSLSFDGIQDIGDALERAELQG 84

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
           +L+  E+ A+  TL    N+ + +    +LD        P+L  L+       ELE++I 
Sbjct: 85  ILTGDELLAIATTLAGARNLRRVIDN--QLD-------CPILTALVAELRTYPELEQEIH 135

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRR 175
            CID +  +  DRAS+ L  IR + +R    L S + +    I QA  G + + LIT+R 
Sbjct: 136 RCIDERGQVT-DRASQKLGEIRTDLRR----LRSQITQKLQNILQAKSGAVQEQLITQRG 190

Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
            R  + +KA  K  +P GI  + S+SGAT ++EP   V   N   ++   E AEE AI  
Sbjct: 191 DRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSIVPMGNQLRQVIRKEQAEEEAIRR 249

Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
            LT ++A  + +++ L+  V  +DLA ARA ++ W+    P      H      I +  +
Sbjct: 250 ALTEQVAAVKPDLERLLAIVTTLDLATARARYSFWLGANPPRFI---HRQDQEIITLRHL 306

Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
           +HPLL+               P+                      VP+D+ +    RVV 
Sbjct: 307 RHPLLV------WQQQHEQGQPV----------------------VPVDLLISPHIRVVT 338

Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
           ITGPNTGGKT ++KTLGLA+LM+K GL++PA+    +PWFD +LADIGD QSL+Q+LSTF
Sbjct: 339 ITGPNTGGKTVTLKTLGLAALMAKVGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTF 398

Query: 416 SGHISRIVDILELV---------------SRE----------------------SLVLID 438
           SGHI RI  IL  +               SRE                      +LVL+D
Sbjct: 399 SGHIRRISRILNALGHGEEAALRLRSGQGSREQGAGEQNLELRTPDSVLSTQHSALVLLD 458

Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
           E+G+GTDP EG ALA ++LQYL D   LA+ TTH+ +L  LK +D RFENA+ EF   TL
Sbjct: 459 EVGAGTDPVEGSALAIALLQYLADHAQLAIATTHFGELKALKYEDERFENASVEFDETTL 518

Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
            PTYR+LWG  G SNAL IA  +G   ++I+ A+  V     E  Q     +   L  +R
Sbjct: 519 SPTYRLLWGIPGRSNALTIALRLGLKPEVIEHAKTQVGEATDEVNQ-----VIAGLEAQR 573

Query: 559 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 618
           R+ E++A  A ++  +   LY+E+  +A+ L  R   L+A +   VQQ +  AK +I  V
Sbjct: 574 RRQETKATEAQNVLQQAERLYKEVSAKAEALQEREKALRASQEVAVQQAIAQAKTEIAQV 633

Query: 619 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHV 678
           ++  +     A         +++ +A+  I + ++     +      + F P+ G+++ +
Sbjct: 634 IRRLQQGTPTAQD------AQQATNALNQIAQQYQ----PAPPPKPKAGFMPKVGDRIRI 683

Query: 679 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
              G + A V+  P +D    V++G M++ V   +I  +   K
Sbjct: 684 SKFG-QTAEVLTAPDEDGEFSVRFGIMKMTVTLEDIESLDGQK 725


>gi|428309185|ref|YP_007120162.1| MutS2 family protein [Microcoleus sp. PCC 7113]
 gi|428250797|gb|AFZ16756.1| MutS2 family protein [Microcoleus sp. PCC 7113]
          Length = 839

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 243/759 (32%), Positives = 377/759 (49%), Gaps = 117/759 (15%)

Query: 16  SLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
           +L ES  LL QT     L    +  L    I+DI   L  A    LLS  E+ A+  TL 
Sbjct: 40  TLSESLDLLTQTKEVYQLEARLTSGLSFEGIQDIGESLERAELQGLLSGEELLAIATTLS 99

Query: 74  AVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
            V  + + + +         Q   P+L EL+       ELE++I   ID +   + DRAS
Sbjct: 100 GVRRLRRVIDD---------QEDVPILNELVAEVRTYPELEQEIHHSIDERG-DVADRAS 149

Query: 133 EDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L  IR +    R R  + L  +L++      Q G + + +IT+R  R  + +KA  K 
Sbjct: 150 PKLAGIRLKLKSLRDRIYQVLQGILQR------QGGAVQQQVITQRGDRFVIPVKAPQKD 203

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P GI  + SS+GAT ++EP   V  +N        E  EE AIL  LT ++A  + ++
Sbjct: 204 AIP-GIVHDTSSTGATVYVEPNAIVGLSNQLRIHRRQEQTEEEAILRALTQQVAAVKPDL 262

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           + L+     +DLA A+A ++ W+    P  +  Q+      +I +  ++HPLL+      
Sbjct: 263 EKLLAVATALDLATAKARYSLWLQANPPRFIDRQA----GETITLRELRHPLLVWQQ--- 315

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                    P+                      VPI+++++   RVV ITGPNTGGKT +
Sbjct: 316 ---QHEQGTPV----------------------VPINVQIQPSIRVVAITGPNTGGKTVT 350

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KTLGLA+LM+K GL++PA+    LPWFD +LADIGD QS+EQ+LSTFSGHI RI  ILE
Sbjct: 351 LKTLGLAALMAKVGLFVPAREPVELPWFDQVLADIGDEQSIEQSLSTFSGHIRRISRILE 410

Query: 428 LVSRES---------------------------------------------LVLIDEIGS 442
            +  ES                                             LVL+DE+G+
Sbjct: 411 AIRGESEALQVDTLLAPRQNSDEDAAQVESWEDDAQTSNLLQPSTPAPSPSLVLLDEVGA 470

Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
           GTDP+EG ALA ++LQ+L +   L V TTHY +L  LK +D RFENA+ EF   TL+PTY
Sbjct: 471 GTDPAEGSALAIALLQHLANTAQLTVATTHYGELKALKYQDERFENASVEFDDSTLQPTY 530

Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 562
           R+LWG  G SNAL +A+ +G +  ++ +AQ L+     +  Q     +   L  +RR+ E
Sbjct: 531 RLLWGIPGRSNALAVARRLGLNPNVVDQAQSLIGGASEDINQ-----VIAGLEAQRRRQE 585

Query: 563 SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
           ++A+ A  L  +   L++E+ D A+ L+ R   LK  + + VQ+ L  AK +I  V++  
Sbjct: 586 TKAKEATQLLQQAERLHQEVSDRARLLNERERTLKLSQERAVQEALVQAKEEIAQVIRTL 645

Query: 623 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLG 682
           +   + A         + ++ A  A+ E  +      +      SF P+ G+++ +  L 
Sbjct: 646 QQGPKSA---------QNAQKATDALQEIAQRRLPAKLPAKQKPSFRPKVGDRIRIPRL- 695

Query: 683 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           ++ A V+  P +D  + V++G M++ V  +++  +   K
Sbjct: 696 NQTAEVLSAPDEDGELTVRFGLMKMTVLLSDVESLDGQK 734


>gi|119512341|ref|ZP_01631426.1| MutS 2 protein [Nodularia spumigena CCY9414]
 gi|119462992|gb|EAW43944.1| MutS 2 protein [Nodularia spumigena CCY9414]
          Length = 770

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 235/721 (32%), Positives = 359/721 (49%), Gaps = 90/721 (12%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
           L    I+DI   L  A    +L+  E+ A+  TL    N+ + +        D+ +    
Sbjct: 18  LSFEGIQDIGDSLERAELSGILAGDELLAIATTLAGTRNLRRVI--------DNQEDLPT 69

Query: 99  LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
           L +L+ +     ELE++I  CID +  +  DRAS  L  IR E    +  + S + +   
Sbjct: 70  LADLVADLRTYPELEQEIHRCIDERGQVT-DRASLKLGEIRTE----LRKIRSQITQKLH 124

Query: 159 QIFQA--GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
            I QA  G + + +IT+R  R  + +KA  K  +P GI  + S+SGAT ++EP   V F 
Sbjct: 125 NILQAKSGAVQEQIITQRGDRYVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSIVPFG 183

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N   +    E  EE AI   LT ++A+ + +++ L+  V  +DLA ARA ++ W+    P
Sbjct: 184 NQLRQTIRREQTEEEAIRRSLTQKVAEVKPDLERLLAIVTTLDLATARARYSFWLGANPP 243

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
              ++     +  I +  ++HPLL+         A                         
Sbjct: 244 RFINRED---NEMITLRQLRHPLLVWQQQHEHGQAV------------------------ 276

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
               VP+D+ +    RVV ITGPNTGGKT S+KTL LA+LM+K GL++PA+    +PWF+
Sbjct: 277 ----VPVDLLISPHLRVVTITGPNTGGKTVSLKTLALAALMAKVGLFVPAREPVEIPWFE 332

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES----------------------- 433
            +LADIGD QSL+Q+LSTFSGHI RI  IL  + +E                        
Sbjct: 333 QVLADIGDEQSLQQSLSTFSGHIRRISRILNALDQEEESENISLSPDSPHSPHTPHTPHT 392

Query: 434 ----LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
               LVL+DE+G+GTDP EG ALA ++LQYL +   L + TTH+ +L  LK +D RFENA
Sbjct: 393 PHSSLVLLDEVGAGTDPVEGSALAIALLQYLANHAQLTIATTHFGELKALKYEDERFENA 452

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF   TL PTYR+LWG  G SNAL IA+ +G   ++I +A+  V     E  Q     
Sbjct: 453 SVEFDESTLSPTYRLLWGIPGRSNALTIARRLGLKPEVITQAKTQVGGATDEVNQ----- 507

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
           +   L  +RR+ E++A  A SL  +   LY+E+  ++  L  R   L+A +   VQQ + 
Sbjct: 508 VIAGLEAQRRRQETKAAEAQSLLQQAERLYKEVSAKSDALQEREKALRADQEVAVQQAIA 567

Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
            AK +I  V++  +     A         +++  A+  I + ++P     V+      F 
Sbjct: 568 QAKGEIAQVIRRLQKGTPKAQD------AQQATDALNQISQKYQP----KVAPKPKVGFM 617

Query: 670 PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA 729
           P+ G++V +   G + A V+  P  D    V++G M++ VK  +I  +   K +    P 
Sbjct: 618 PKVGDRVRLSQFG-QTADVLTSPDADGEFSVRFGIMKMTVKLEDIESLDGQKAEPIVKPK 676

Query: 730 P 730
           P
Sbjct: 677 P 677


>gi|307152450|ref|YP_003887834.1| MutS2 family protein [Cyanothece sp. PCC 7822]
 gi|306982678|gb|ADN14559.1| MutS2 family protein [Cyanothece sp. PCC 7822]
          Length = 801

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 251/736 (34%), Positives = 396/736 (53%), Gaps = 83/736 (11%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
           +G    +  ++P  ++ EES +LL QT     + Q  +  L    I DI   L  +  G 
Sbjct: 27  LGAIAAEYMKLP--ETQEESSQLLAQTEEVYDLEQRLNTALSFEGITDIGDALERSDLGG 84

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
           +LS  E+ ++  TL  V  + + + E         Q   P+L+ L+ N     E+E++I 
Sbjct: 85  VLSGKELLSIATTLAGVRRLRRLIEE---------QEKIPVLKTLVANVRTYPEIEQEIH 135

Query: 118 FCI--DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRR 175
            CI  D +   + DRAS  L  IR + K   E +   L+ +  +  Q+G + + +IT+R 
Sbjct: 136 RCIEEDGE---VSDRASPRLREIRGQMKVVRERIYRKLQDIMQR--QSGAMQESVITQRG 190

Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
            R  + +KA  K  +P GI  + SS+GAT ++EP   VE  N   +   SE  EE  IL 
Sbjct: 191 DRFVLPVKAPQKDQVP-GIIHDSSSTGATLYIEPSSVVELGNQLRQYHRSEQIEEETILR 249

Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEG 294
            L+A++A+ + +++ L+     +DLA AR+ ++ W+ G  P  +    H++         
Sbjct: 250 GLSAKVAEVKEDLEDLLAAATILDLAVARSRYSWWLKGNPPRFIEPHEHITLRQ------ 303

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
           ++HPLL+                 +   +  E+             VPI+++V+ + RVV
Sbjct: 304 LRHPLLIWQ---------------QQHEQGPEV-------------VPINVQVDPKIRVV 335

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
            ITGPNTGGKT ++KT+GLA+LM+KAG+++PAK    LPWF+ ILADIGD QSL+Q+LST
Sbjct: 336 AITGPNTGGKTVTLKTVGLAALMAKAGIFIPAKVPVELPWFEQILADIGDEQSLQQSLST 395

Query: 415 FSGHISRIVDILELV---------SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
           FSGHI RI+ I+E +         +  SLVL+DE+G+GTDP+EG ALATS+L+YL +  G
Sbjct: 396 FSGHIRRIIRIIEALNPTSEAPTTASSSLVLLDEVGAGTDPAEGSALATSLLKYLAEAAG 455

Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
           L + TTHY +L  LK +D RFENA+ EF+ +TL PTYR+LWG  G SNAL IA  +G   
Sbjct: 456 LTIATTHYGELKALKYQDERFENASVEFNDQTLSPTYRLLWGIPGRSNALTIAGRLGLRP 515

Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
            II+ A+  V     +      + +   L ++RR+ E +A+ A  L  +    Y E+  +
Sbjct: 516 DIIEDARTRVGGFSED-----INRVIAGLEQQRREQEEKAKEATQLLKQTERFYAEVSQK 570

Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 645
           A  L +R   LK ++ Q++Q+ +  AK +I  V++    QL+  +    N+  +++  A+
Sbjct: 571 ANALQQREKDLKQQQEQEIQKAIIAAKAEIAQVIR----QLQQGTPTAQNA--QKATEAL 624

Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
             I E   P     V       + PQ GE+V + SLG + A V+ +  + + V V++G M
Sbjct: 625 GKIAEKQLPKQKQPV-----KIYRPQVGEKVRIPSLG-QTAEVLNILEESEEVSVRFGIM 678

Query: 706 RVRVKKNNIRPIPNSK 721
           ++ V   +I  +   K
Sbjct: 679 KMTVPFRDIESLDGKK 694


>gi|443327052|ref|ZP_21055687.1| MutS2 family protein [Xenococcus sp. PCC 7305]
 gi|442793341|gb|ELS02793.1| MutS2 family protein [Xenococcus sp. PCC 7305]
          Length = 804

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 243/739 (32%), Positives = 385/739 (52%), Gaps = 87/739 (11%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLD----LSTIEDIAGILNSAVS 56
           +G    Q  Q+P  +S E S +LL QT+    +   Q LD       ++DI   L     
Sbjct: 27  IGAVAAQNLQLP--QSKEVSLQLLAQTTEIYNL--EQELDSGWTFRGVKDIGVALERTKI 82

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEK 115
           G +LS  E+  +  TL  +  + + +        DS     P+L EL+       E+E++
Sbjct: 83  GGILSAQELLDIATTLAGIRYLRRII--------DSKTEELPVLNELIFPVRTYPEIEQQ 134

Query: 116 IGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITK 173
           I  CID +  I  DRA+  +  IRA+ K    +L   +++   +I Q+  G + + +IT+
Sbjct: 135 IHHCIDDRGEIT-DRANPRIAGIRAKVK----SLRRQIRQSLQRIIQSNLGSVQEAVITQ 189

Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
           R  R  + +K   K  +P GI  +VSS+G+T ++EP   V   N   +    +  EE  +
Sbjct: 190 RSDRFVIPVKPGQKETIP-GIVHDVSSTGSTLYIEPSSVVNAGNALRQAEKQQKREEEIV 248

Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
           L  LT +I + + +++ L+     +DLA ARA ++ W++   P    +S      ++ + 
Sbjct: 249 LRELTEKITEVQEDLEELLAIATVLDLATARARYSLWLEANPPRFIERSE-----TVTLR 303

Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
            ++HPLL+         A                             VPID+K+E +TRV
Sbjct: 304 RLQHPLLVWQQKHESGTAV----------------------------VPIDVKIEPQTRV 335

Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
           V ITGPNTGGKT ++KT+GLA+LM+KAG+++PAK    +PWF+ +LADIGD QSL+Q+LS
Sbjct: 336 VAITGPNTGGKTVTLKTIGLAALMAKAGIFVPAKVPVEIPWFNTVLADIGDEQSLQQSLS 395

Query: 414 TFSGHISRIVDILELVSRE---------SLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
           TFSGHI RI  I+E +  +         SLVL+DE+G+GTDP+EG ALA ++L+YL +  
Sbjct: 396 TFSGHIRRISRIIEALKPQEELKANCSNSLVLLDEVGAGTDPAEGSALAIALLKYLAEHS 455

Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
            L V TTHY +L  LK +D RFENA+ EF   +L+PTYR+LWG  G SNAL IA+ +G D
Sbjct: 456 LLTVATTHYGELKALKYQDERFENASVEFDDSSLQPTYRLLWGIPGRSNALTIAQRLGLD 515

Query: 525 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 584
            +I+  AQ LV   + +      +++  +L  +RR+ ES+A  A  L ++    Y E+  
Sbjct: 516 SEIVTDAQNLVGIGKTD----DVNQVIAALENQRREQESKAEEAGKLLSQTELFYEEVSQ 571

Query: 585 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE--NQLRDASADEINSLIKESE 642
            A+ L  R   LK  + + VQ+ +  AK +I  V++  +  NQ    +     +L K + 
Sbjct: 572 RAESLQAREQELKLSQEKAVQKAIAEAKAEIAQVIRRLQQGNQTAQKAQQATEALNKIAS 631

Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
               A  +A +P             + PQ GE+V +  L ++   V+ +  ++  + V++
Sbjct: 632 KQAIAKPKAPKP------------GYHPQVGEKVRIPRL-NQTGEVLSIE-ENSQLTVRF 677

Query: 703 GKMRVRVKKNNIRPIPNSK 721
           G M++ V    I  +   K
Sbjct: 678 GLMKMTVGVTEIESLDGKK 696


>gi|428301815|ref|YP_007140121.1| MutS2 protein [Calothrix sp. PCC 6303]
 gi|428238359|gb|AFZ04149.1| MutS2 protein [Calothrix sp. PCC 6303]
          Length = 796

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 235/737 (31%), Positives = 381/737 (51%), Gaps = 67/737 (9%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
           +G    +  QIP  ++  +S+ LL QT     +    S  L    I+DI   +  A    
Sbjct: 30  LGAIASRNLQIPTSQA--QSENLLAQTQEIYKLESRISPGLSFEGIQDIGDAIERAALQG 87

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           +L+  E+ A+  TL    N+ + +        D+ +    LL+L+ +     E+E++I  
Sbjct: 88  ILAGEELLAIATTLAGTRNLRRII--------DNQEDLPILLDLVADLRTYPEIEQEIHR 139

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
           C+D +  I  DRAS+ L  IRAE +++   +   L+ +     ++  + + +IT+R  R 
Sbjct: 140 CVDERGQIA-DRASQKLGDIRAELRKSRSQIIQKLQNILQ--VKSNAVQENVITQRGDRY 196

Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
            + +KASHK ++  GI  + S+SG T ++EP   V   N   +L   E  EE  I   LT
Sbjct: 197 VIPVKASHKDVI-HGIVHDTSTSGVTLYIEPNSVVPMGNQLRQLIRKEEIEEEVIRRQLT 255

Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
           A++A  + +++ L+  V  +DLA A++ ++ W+    P    +     + +I +  ++HP
Sbjct: 256 AQVADIKDDLERLLAIVTTLDLATAKSRYSFWLKANPPRFVDRE---ANETITLRKLRHP 312

Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
           LL                      +  E+             +P+D+ ++ ETRVV ITG
Sbjct: 313 LLEWQHQHE---------------QGHEV-------------IPVDLVIQPETRVVTITG 344

Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
           PNTGGKT ++KTL LA+LM+K GL++PA+    LPWF+ +LADIGD QSL+Q+LSTFSGH
Sbjct: 345 PNTGGKTVTLKTLALAALMAKVGLFVPAREPVELPWFEQVLADIGDEQSLQQSLSTFSGH 404

Query: 419 ISRIVDILELVSRE----SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
           I RI  IL  ++ +    SLVL+DE+G+GTDP EG ALA ++L +L + V L + +TH+ 
Sbjct: 405 IRRISRILNAITGDTVTPSLVLLDEVGAGTDPVEGSALAIALLHHLANHVLLTMASTHFG 464

Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
           +L  LK +D RFENA+ EF   TL PTY++LWG  G SNAL IA+ +G    +I+ A++ 
Sbjct: 465 ELKALKYQDERFENASVEFDDATLSPTYKLLWGIPGRSNALAIAQRLGLSVDVIEAAKQQ 524

Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
           +     E      +E+   L  +RR+ E++A  A +L  +   LY+E+  +A +L+ R  
Sbjct: 525 MGGANDE-----VNEVIAGLEAQRRRQETKASEAQNLLHQAEKLYKEVSAKATNLEEREQ 579

Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP 654
            LKA +   VQ  +  AK +I  V++    Q    +A E               +    P
Sbjct: 580 ALKASQEVAVQNAIAQAKGEIAKVIKGL--QKGKPTAQEAQQATNTLNQISTQFIPKAAP 637

Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
                        F P+ G+++ +  +G + A V+  P  D  + V++G M++ VK  +I
Sbjct: 638 KAPI--------GFIPKTGDRIRITKIG-QTAEVITPPNSDGELNVRFGIMKMTVKLEDI 688

Query: 715 RPIPNSKRKNAANPAPR 731
             +   K +  A P  R
Sbjct: 689 ESLDGKKPEPIAKPQNR 705


>gi|254412960|ref|ZP_05026732.1| MutS2 family protein [Coleofasciculus chthonoplastes PCC 7420]
 gi|196180124|gb|EDX75116.1| MutS2 family protein [Coleofasciculus chthonoplastes PCC 7420]
          Length = 820

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 244/737 (33%), Positives = 369/737 (50%), Gaps = 92/737 (12%)

Query: 16  SLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
           +L ES  LL QT     L    +       I+DI   L  A    +LS  ++ A+  TL 
Sbjct: 40  TLAESLHLLAQTKEVYQLECQLTSGWTFEGIQDIGDALERAERQGILSGEDLLAIATTLA 99

Query: 74  AVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
            V  + + + +  ++         P+L +L+ +     ELE++I  CID +  +  DRAS
Sbjct: 100 GVRRLRRLIDDQEDI---------PVLNQLVADIRTYPELEQEIHRCIDERGDVT-DRAS 149

Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
             L  IR   K   + +   L+ +  +  Q G + +PLIT+R  R  + +KA  K  +  
Sbjct: 150 PKLAEIRQHSKSLRDRIYQTLQNIVQR--QGGALQQPLITQRGDRFVLPVKAPQKDSV-S 206

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           GI  + SS+GAT ++EP   V   N        E AE  A+  +LT ++A  + +++ ++
Sbjct: 207 GIVHDASSTGATLYIEPHAIVGLGNQLKTYQRREQAEAEAVRRVLTEQVAAVKPDLEQVL 266

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
                +DLA A+A ++ W+    P     +      SI +  ++HPLL+           
Sbjct: 267 AVATRLDLATAKARYSLWLQANPPRFIDPNQ---RESITLRQLRHPLLVWQ--------- 314

Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPV-PIDIKVECETRVVVITGPNTGGKTASMKTL 371
                     ++ E           D PV PI I+++ + +VV ITGPNTGGKT ++KTL
Sbjct: 315 ---------YQHEE-----------DAPVVPITIQIQPQIKVVAITGPNTGGKTVTLKTL 354

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE---- 427
           GLA+LM+K GL++PAK    LPWF+ ILADIGD QSLEQ+LSTFSGHI RI  ILE    
Sbjct: 355 GLAALMAKVGLFVPAKEPVELPWFEQILADIGDEQSLEQSLSTFSGHIRRISRILEELEN 414

Query: 428 ---------------LVSRE--------SLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
                          L  RE        +LVL+DEIG+GTDP+EG ALA ++L YL D  
Sbjct: 415 CRAPWRVSTDGGEDDLAQREPDTPHPTSALVLLDEIGAGTDPAEGSALAIALLNYLADHA 474

Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
            L V TTHY +L  LK +D RFENA+ EF+  TL PTYR+LWG  G SNAL IA+ +G  
Sbjct: 475 QLTVATTHYGELKALKYQDERFENASVEFNDVTLSPTYRLLWGIPGRSNALTIAERLGLK 534

Query: 525 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 584
             ++  AQ LV     +  Q     +   L  +RR  E++A+ A  L  +   L++E+  
Sbjct: 535 SDVVSLAQTLVGGSSEDVNQ-----VISGLEAQRRDQETKAQEANQLLQQTERLHQEVSS 589

Query: 585 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 644
           +AK L  R   LK  + Q VQ  +  AK +I  V++  +         +I    K++  A
Sbjct: 590 KAKLLQERERELKLSQEQAVQDAIAQAKAEIAQVIRKLQQ------GPQIAQNAKKATDA 643

Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
           +  I + H              +F P+ G+++ +  L ++ A V+    +D  + V++G 
Sbjct: 644 LKEIEQRH----IPKPPAKAKPAFQPKVGDRIRIPRL-NQTAEVLTPADEDGELTVRFGL 698

Query: 705 MRVRVKKNNIRPIPNSK 721
           M++ V   +I  +   K
Sbjct: 699 MKMTVSLADIESLEGQK 715


>gi|411117308|ref|ZP_11389795.1| MutS2 family protein [Oscillatoriales cyanobacterium JSC-12]
 gi|410713411|gb|EKQ70912.1| MutS2 family protein [Oscillatoriales cyanobacterium JSC-12]
          Length = 865

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 251/784 (32%), Positives = 387/784 (49%), Gaps = 127/784 (16%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQP---LDLSTIEDIAGILNSAVSG 57
           +G    Q  +IP  +  +++  LL QT     + +S+P   L+   I+DI   L  A  G
Sbjct: 27  LGAIAAQNLKIPTHR--DQTLDLLAQTQEVYDL-ESRPSGGLNFDGIDDIGEPLERAGLG 83

Query: 58  QLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
            +L+  E+ ++  TL     + + +        D+   ++ L  L+++     ELE+ I 
Sbjct: 84  GILTGKELLSIATTLAGARTLRRTI--------DNYPEFTVLNNLIQDLRTYPELEQDIH 135

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
            CI      +L+RAS  L  IR + K+  + + S+L  +  +  +A  I + +IT+R  R
Sbjct: 136 HCIGDHG-DVLERASLKLGNIREQLKQVRDRIYSILHSILQR--KAHAIQEHVITQRSGR 192

Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
             + +KA  K  +P GI  + S SGAT ++EP+ AV  NN   +L   E  EE AI   L
Sbjct: 193 FVLPVKAPQKDAIP-GIVHDTSMSGATLYIEPQSAVNLNNQLRQLQRQEQVEEEAIRQRL 251

Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
           + ++A  + +++ LM  V  +DLA ARA ++ W+    P   + S     SSI +  ++H
Sbjct: 252 SKKVADVKPDLERLMAIVTTLDLATARARYSDWLGANPPRFPNSS-----SSIVLRQLRH 306

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
           PLL+         A                             VPID+ ++ + RVV IT
Sbjct: 307 PLLVWQEQHEQGKAV----------------------------VPIDLVIQPQIRVVAIT 338

Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
           GPNTGGKT ++KT G+A+LM+K GL++PAK    LPWFD ILADIGD QSL+Q+LSTFSG
Sbjct: 339 GPNTGGKTVTLKTFGIAALMAKVGLFVPAKEPAELPWFDQILADIGDEQSLQQSLSTFSG 398

Query: 418 HI---SRIVDIL---------ELVSRE--------------------------------- 432
           HI   SRI++ L         E+ S+E                                 
Sbjct: 399 HIRRISRILEALEGQKQEQEPEVRSQEPGDSNQGGYRVLGMDSPQPPIPNPYFPSSATKL 458

Query: 433 -------------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
                        SLVL+DE+G+GTDPSEG ALA ++L+YL D  GL + TTH+ +L  L
Sbjct: 459 QSLIPNPQSPVPLSLVLLDEVGAGTDPSEGSALAIALLKYLADHAGLTIATTHFGELKAL 518

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
           K +D RFENA+ EF   +L PTYR+LWG  G SNAL IA  +G    II+ A+  V    
Sbjct: 519 KYQDPRFENASVEFDDVSLSPTYRLLWGIPGRSNALAIASRLGLKDTIIEAAKTYVGGAT 578

Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
            +      + +   L E+RR+ E++++ A  L      LY+E+  +A  L  R   L   
Sbjct: 579 QD-----VNTVIAGLEEQRRQQETRSQEAEKLLKHAERLYQEVSRKAASLQEREKALHLG 633

Query: 600 ETQQVQQELNFAKVQIDTVVQDF--ENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
           + Q VQ+ +  AK  I  V++      Q   A+     +L + SE  + +  +  +P   
Sbjct: 634 QEQAVQEAIAQAKRDIAQVIRQLQQGPQTAQAAQQATEALNQISEQYLPSRQQQPKPK-- 691

Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
                   S F PQ G+++ +  LG + A V+ +P  +D + V++G M++ V   ++  +
Sbjct: 692 --------SGFCPQVGDRIRIPRLG-QTAEVLSIPDANDEITVRFGLMKMTVSLQDVESL 742

Query: 718 PNSK 721
              K
Sbjct: 743 TGEK 746


>gi|427733731|ref|YP_007053275.1| MutS2 family protein [Rivularia sp. PCC 7116]
 gi|427368772|gb|AFY52728.1| MutS2 family protein [Rivularia sp. PCC 7116]
          Length = 817

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 233/732 (31%), Positives = 368/732 (50%), Gaps = 91/732 (12%)

Query: 19  ESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           ES+ LL QT     +       +    I+D    L  A    +L+  E+ A+  TL  + 
Sbjct: 43  ESEYLLAQTKEVYELENRLDNGISFEGIQDFGDSLERAELKGILAGDELLAIATTLAGIR 102

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
           N+ + +    +L+         L EL+ +     ELE++I  CID +  +  DRASE L 
Sbjct: 103 NLRRLIDNHPDLE--------ILNELVADLRTYPELEKEIHRCIDERGQVT-DRASEKLG 153

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            IR   +++   +   L+ +     +A  + + +IT+R  R  + +KA  K  +P GI  
Sbjct: 154 DIRNSLRQSRSQITRKLQNIIQ--VKANALQETIITQRSDRFVIPVKAPQKDAIP-GIVH 210

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT ++EP   V   N   +L   E  EE AI   L+ ++A+ + +++ L+    
Sbjct: 211 DTSTSGATLYVEPNSIVPMGNQLRQLLRREQVEEEAIRRKLSEQVAEVKLDLEKLLAVAT 270

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
            +DLA A+A ++ W+    P     S    + +I +  ++HPLL+               
Sbjct: 271 TLDLATAKARYSFWLKANPPRFIQPS----EENITLRELRHPLLVWQ------------- 313

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
             +   +  E+             +P+++ +    RVV ITGPNTGGKT ++KTLG A+L
Sbjct: 314 --QQHEQGHEV-------------IPVNLVIHPYIRVVTITGPNTGGKTVTLKTLGFATL 358

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR----- 431
           M+K GL++PA+    LPWFD +LADIGD QSLEQ+LSTFSGHI RI  IL+ VS      
Sbjct: 359 MAKIGLFVPAREPVELPWFDRVLADIGDEQSLEQSLSTFSGHIRRISRILDAVSHVKVEE 418

Query: 432 --------------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
                                SLVL+DE+G+GTDP EG ALA ++L+YL D   L + TT
Sbjct: 419 AQTAEKAEQEENTSLPSPTPSSLVLLDEVGAGTDPVEGSALAIALLRYLADNSMLTIATT 478

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           H+ +L  LK +D RFENA+ EF   TL PTYR+LWG  G SNAL IA  +G   +++++A
Sbjct: 479 HFGELKALKYQDERFENASVEFDEATLSPTYRLLWGIPGRSNALAIASRLGLKPEVVEKA 538

Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
           +  +     E  Q     +   L  +RR+ E +A  A  L  +    Y+E+  +A DL+ 
Sbjct: 539 KDEMGGATDEVNQ-----VIAGLEAQRRRQEEKATQAQDLLQQAERFYKEVSAKAADLEE 593

Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA 651
           R   L+A +   VQQ +  AK +I  V++  +           N   ++++ A  +I   
Sbjct: 594 REKSLRASQEIAVQQAIASAKGEIAAVIKRLQQG---------NPTAQDAKKATDSI--- 641

Query: 652 HRPDDDF--SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
           ++  D F         + F P+ GE++ +  LG + A V+  P +D    V++G M++ V
Sbjct: 642 NKLADRFIPKAEPKPKAGFMPKVGERIRIPKLG-QTAEVLTAPDEDGEFNVRFGIMKMTV 700

Query: 710 KKNNIRPIPNSK 721
           K  ++  +   K
Sbjct: 701 KLKDVESLSGEK 712


>gi|427712156|ref|YP_007060780.1| MutS2 family protein [Synechococcus sp. PCC 6312]
 gi|427376285|gb|AFY60237.1| MutS2 family protein [Synechococcus sp. PCC 6312]
          Length = 817

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 239/728 (32%), Positives = 376/728 (51%), Gaps = 77/728 (10%)

Query: 16  SLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
           +L +SQ+LL QT  A  L     + LD S I++I   LN A    +L+P E+  + +T  
Sbjct: 64  NLRDSQQLLAQTEDAYKLTTYYLRELDFSQIKNIQSGLNRAAHQGVLTPEELLGIAQTQA 123

Query: 74  AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
              N+ + +        DS    S L  LL       +LE++I  CI  +   + +RAS 
Sbjct: 124 GSRNLRRVV--------DSYPDLSALQALLAALRTFPQLEQEIHRCI-TEQGEVSERASP 174

Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
            L  IR + ++ M       +       +   +   +IT+R  R  + +KA  +  +P G
Sbjct: 175 QLAAIR-QHQQQMRGQIHQ-QLQQIIQRKHSSLQDTVITQRAERYVLPVKAPQRDAIP-G 231

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  +VS +GAT ++EP+  VE NN   +L+     EE  I  +L+ ++ +   E++  ++
Sbjct: 232 IVHDVSVTGATLYIEPQAIVELNNRLRQLARQGGQEEYRIREVLSQQVTEVVLELQQGLE 291

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            + ++DLA ARA +  W++   P       V  D  I++  ++HPLL+            
Sbjct: 292 LITQLDLAVARARYGLWLNANIP-----RFVELDEPIHLRNLRHPLLIWQH-------HQ 339

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
              P          TV           VPI + +   T+VV ITGPNTGGKTA++KTLGL
Sbjct: 340 EQGP----------TV-----------VPITVDIAPPTKVVTITGPNTGGKTATLKTLGL 378

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE- 432
            +LM+KAGL +PA     LPWF  +LADIGD QSL+ NLSTFSGHI  I +ILE ++ E 
Sbjct: 379 VALMAKAGLMIPAAEPVELPWFRQVLADIGDEQSLQHNLSTFSGHIRTISEILEALTTEA 438

Query: 433 -----SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
                +LVL+DE+G+GTDPSEG ALA ++L +L D+  + + TTHY +L  LK +D RFE
Sbjct: 439 NPDNAALVLLDEVGAGTDPSEGTALAIALLTHLADQAQITIATTHYGELKALKYQDPRFE 498

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NA+ EF  ETL PTYR+LWG  G SNAL IA+ +G +  +I  A + +        Q + 
Sbjct: 499 NASVEFDSETLAPTYRLLWGIPGRSNALAIAQRLGLNPDVIAAAAQAL-----PADQDQV 553

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
           +++   L  +RR  E++A TA+ L +    L++E+  + + L +R  HL+  + Q V   
Sbjct: 554 NQVIAGLEAQRRHQEAKASTASQLLSATEKLHQELLTKTEQLRQRELHLRQHQAQAVNTA 613

Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
           ++ A+ +I  +++         +  +      +S++ ++ I   + P     +       
Sbjct: 614 IDQAQAEIAQLIKKL------QAGPQTAQAAAQSQAQLSQIQAKYAPPAPKPI-----PG 662

Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPG-DDDTVLVQYGKMRVRVKKNNIRPIPNSKRK--- 723
           + PQ GE+V +     KL    E+ G +DD + V+ G M+V VK  +I  +   K +   
Sbjct: 663 YIPQMGERVRIP----KLQQTGEIIGLEDDAIAVRLGLMKVMVKLTDIESLAGEKPQISP 718

Query: 724 NAANPAPR 731
            A  P P+
Sbjct: 719 KATQPPPQ 726


>gi|428218654|ref|YP_007103119.1| MutS2 family protein [Pseudanabaena sp. PCC 7367]
 gi|427990436|gb|AFY70691.1| MutS2 family protein [Pseudanabaena sp. PCC 7367]
          Length = 750

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 235/714 (32%), Positives = 375/714 (52%), Gaps = 62/714 (8%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
           L +  I+DI   L       +L   ++  V  TL    N+ +++ + A+ D + LQ +  
Sbjct: 64  LTMEGIQDITVPLKRVEKNGMLYAEQLWQVATTLAGARNL-RRIIDNAD-DCEYLQAF-- 119

Query: 99  LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
               +       ELE+ I  CID +   +LDRASE L  +RA  ++  + +  +L+ +  
Sbjct: 120 ----VSELRTYPELEQDIYRCID-ESGTVLDRASEKLGQLRASSRQVRDRIYGILQNIMQ 174

Query: 159 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
           +  ++  + + +IT+R  R  + +KA  K  +P G+  + SS+G T F+EP   V  NN 
Sbjct: 175 R--KSAALQENIITQRSDRYVLSVKAPQKDKIP-GVVHDASSTGMTVFVEPHAIVTANNQ 231

Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
             +L+  E AE   IL  L+ ++A+   ++  L+  V EIDLA ARA +A W+    P  
Sbjct: 232 LRQLAKQEQAEIEIILRQLSGQVAEVGEDLWRLLAIVTEIDLAIARARYALWLGANAPTF 291

Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSS-----LRSLSAASSNS------------------ 315
              +  + D++ +IE  +      SS     L+S S    NS                  
Sbjct: 292 I--NFAAPDAATDIESNQKESASQSSDVDQLLQSESDDPGNSQLVEPGDRPATSSLLKKP 349

Query: 316 -NPLKSDVENSEMTVGSLSKGISDFP---------VPIDIKVECETRVVVITGPNTGGKT 365
            + + +D+  +++T+  L   +  +          VP+D+ +  E  VVVITGPNTGGKT
Sbjct: 350 ASKINADLPPAQLTLRGLKHPLLVWQQQHEQGREVVPVDVLIAPEISVVVITGPNTGGKT 409

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
           A++KT GLA+LM+K+G+++PA+    LPWFDL+LADIGD QSL+QNLSTFSGHI RI  I
Sbjct: 410 ATLKTFGLAALMAKSGMFVPAREPVELPWFDLVLADIGDEQSLQQNLSTFSGHIKRIGRI 469

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           L   + ESL+L+DE+G+GTDP+EG A+A ++L+YL     L V TTH+ +L  LK     
Sbjct: 470 LTAATAESLILLDEVGAGTDPTEGSAIAKALLEYLATHACLTVATTHFGELKTLKYNHAC 529

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
           FENAA EF    L PTYR+ WG  G SNAL IA  +GF  +I+++AQ  V     E    
Sbjct: 530 FENAAVEFDDVKLAPTYRLQWGIPGRSNALAIAARLGFPAEILEQAQDHVGFGSAEL--- 586

Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
             + +   L  +RRK E + + A+ L A+   LY EI  +A  L      L+  +  +V 
Sbjct: 587 --NTVIADLEGQRRKHEDKLKQASKLLAQTEHLYVEISKKAAKLKESERELRQNQEIEVT 644

Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 665
           + +  AK +I  V++    +L+   + E    +  +E  +  + + H P         + 
Sbjct: 645 EAIKQAKKEIARVIR----KLQKGDSPEA---VHFAERRVQELSKRHLPSQQPQPKTQSQ 697

Query: 666 SS--FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
           +   + P+ G++V V  LG ++  V+  P + D + V+ G+M++ V   +I  +
Sbjct: 698 AQQKYVPKVGDRVRVPKLG-QVVQVLSEPTNADELSVRLGQMKMTVALRDIEKV 750


>gi|17135027|dbj|BAB77573.1| DNA mismatch repair protein [Nostoc sp. PCC 7120]
          Length = 678

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 215/627 (34%), Positives = 335/627 (53%), Gaps = 65/627 (10%)

Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL 170
           ELE++I  CID +  +  DRAS  L  IR E ++    +   L+ +     ++  + + L
Sbjct: 9   ELEQEIHRCIDERGQVT-DRASTKLGDIRTELRKLRSQITQKLQNILQ--VKSNAVQEQL 65

Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
           IT+R  R  + +KA  K  +P GI  + S+SGAT ++EP   V   N   +    E AEE
Sbjct: 66  ITQRGDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYIEPNSVVPMGNQLRQTIRKEQAEE 124

Query: 231 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI 290
            AI   LT ++A  + +++ L+  V  +D+A ARA ++ W+    P    +        I
Sbjct: 125 EAIRRALTEKVAAVKPDLERLLAIVTTLDMATARARYSLWLKANPPRFIDRQEQEI---I 181

Query: 291 NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECE 350
            +  + HPLL+         A                             +P+D+ +   
Sbjct: 182 TLRQLHHPLLVWQQQHEQGHAV----------------------------IPVDLLISPH 213

Query: 351 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 410
            RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+    +PWFD +LADIGD QSL+Q
Sbjct: 214 IRVVTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEMPWFDQVLADIGDEQSLQQ 273

Query: 411 NLSTFSGHISRIVDIL--------ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
           +LSTFSGHI RI  IL        +L +  SLVL+DE+G+GTDP+EG ALA ++LQYL D
Sbjct: 274 SLSTFSGHIRRISRILNALGTGEQDLETPNSLVLLDEVGAGTDPAEGSALAIALLQYLAD 333

Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
              L V TTH+ +L  LK +D RFENA+ EF   TL PTYR+LWG  G SNAL IA  +G
Sbjct: 334 HAQLTVATTHFGELKALKYEDQRFENASVEFDDATLSPTYRLLWGIPGRSNALAIALRLG 393

Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
              +++++A+  V     E      + +   L  +RR+ E++A  A  +  +   LY+E+
Sbjct: 394 LKAEVVEQAKTQVGEATDE-----VNLVIAGLEAQRRRQETKAAEAQKILQQAERLYKEV 448

Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
            ++A  L  R   LKA +   VQQ +  AK +I  V++    +L+  +A   ++  +++ 
Sbjct: 449 SNKAAALQEREQSLKASQEIAVQQAITQAKGEIAKVIR----RLQQGTATAQDA--QQAT 502

Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
           + +  I + ++     +        F P+ G+++ +   G + A V+  P +D  + V++
Sbjct: 503 NNLHQIAQKYQ----PAPPPKAKPGFVPKVGDRIRISQFG-QTADVLTAPDEDGELTVRF 557

Query: 703 GKMRVRVKKNNI------RPIPNSKRK 723
           G M++ VK  +I      +P P +K K
Sbjct: 558 GIMKMTVKLEDIESLDGQKPEPITKAK 584


>gi|318042364|ref|ZP_07974320.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
           CB0101]
          Length = 861

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 229/738 (31%), Positives = 379/738 (51%), Gaps = 82/738 (11%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           ++P   SL+ SQ+LL QT+  LA+  +    L    + D+   +     G +    E+  
Sbjct: 88  ELPLAPSLKASQELLAQTAELLALDGLTEGGLSFQGVADLRRTVQLCAKGGVAGADELLD 147

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           V  TL     + +++ +A            P+   +++    L ELE+++ FCI+    +
Sbjct: 148 VATTLATARRLRRQIDDA---------ELRPVTTAMVEGLRTLPELEQRLRFCIEDGGRV 198

Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
             DRAS  L  +R +    R+   + L+ LL++ AA +  +      +I +R  R  + +
Sbjct: 199 A-DRASSPLAQLRRQIASARQERRDRLNDLLRRYAALLQDS------VIAERNGRPVLAV 251

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           KA     LP G+  + S+SG+T F+EP+  +   N   +L       E A+L  L+A + 
Sbjct: 252 KAGLAGQLP-GLVHDSSASGSTVFIEPQAVIPLGNRLRQLEGEAREAERAVLQELSALVG 310

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
             +  +++L   +L++D A ARA +  W+  V P L +       + + +EG++HPLLL 
Sbjct: 311 DEQAALEHLQQVLLQLDAALARARYGAWLGAVRPELVADPL----APLRLEGLRHPLLLW 366

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
              R        ++P+                      VP+ ++V    RVV ITGPNTG
Sbjct: 367 QERRE------GTHPV----------------------VPVSVRVHEGLRVVAITGPNTG 398

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++K++GLA+LM++AGL+LP    P+LPW   +LADIGD QSL+QNLSTFSGH+ RI
Sbjct: 399 GKTVTLKSVGLAALMARAGLFLPCSGTPQLPWCAQVLADIGDEQSLQQNLSTFSGHVRRI 458

Query: 423 VDILELV----------SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
             ILE +             SLVL+DE+G+GTDP+EG ALA ++L+ L +R  L + TTH
Sbjct: 459 ARILEALPPAAADLGAAPGASLVLLDEVGAGTDPTEGTALAIALLRQLAERARLTIATTH 518

Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
           + +L  LK  D RFENA+  F +ETL PTY + WG  G SNAL IA  +G D ++++ AQ
Sbjct: 519 FGELKALKYNDARFENASVAFDVETLSPTYHLQWGIPGRSNALAIASRLGLDGQVLEEAQ 578

Query: 533 KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRR 592
           +L   L P R +   +++   L  +R+K +  A  AA+L A    L+ E+    +    +
Sbjct: 579 QL---LAP-RGEGEVNQVIAGLENQRQKQQEAAEEAAALLARTELLHEELLQRWQQQKEQ 634

Query: 593 AAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH 652
           +A L+ +  QQ+++ +   + ++  +++    Q  D     +    + +   + ++ + H
Sbjct: 635 SAELQEQRRQQLERSIRDGQKEVRRIIRRL-RQGHDVDTTSLGETARRAGQRLKSLEQQH 693

Query: 653 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
           RP  +      +   + P  G++V V SLG K   V+ +  D   + V+ G MR+ ++ +
Sbjct: 694 RPQPE----RRDHKGWRPALGDRVRVLSLG-KAGEVLALSADGRELTVRCGVMRLNLELS 748

Query: 713 NIRPIPNSKRKNAANPAP 730
            I  +      N   PAP
Sbjct: 749 AIEGL------NGEKPAP 760


>gi|159463342|ref|XP_001689901.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158283889|gb|EDP09639.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 1007

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 262/790 (33%), Positives = 388/790 (49%), Gaps = 127/790 (16%)

Query: 5   VVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSE 64
           +V    +P G+S E+S+ LL QT  AL       L++  + DI     +A  G  L+  +
Sbjct: 100 LVAGGGLPRGRSREDSELLLQQTQEAL----EAGLEVGGLFDIRPAAEAAAGGVCLTGKQ 155

Query: 65  ICAVRRTLRAVNNVWKKLTEAAELDGDSLQ----RYSPLLELLKNCNFLTELEE----KI 116
           +  V  TL A   + +++T  A+      Q    RY  L  L  +   +T+ E      I
Sbjct: 156 LEGVASTLEAAFELKERVTVPAQGPQQQQQQGGLRYPSLAALAAS---ITDEERTLLRAI 212

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
             CI  +   + D ASE L  +RAER+ N E L + ++  A Q+ Q G  +   ++  R 
Sbjct: 213 RGCI--QYGGVSDAASEALAAVRAERQANKERLRAEVEGWARQLQQKGAAEAGAVSLIRG 270

Query: 177 RMCVGIKASHKYLLPDG-IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
           R C+G++A  +  LP G + L  SS+GAT ++EPK AVE NN E  L+  E  E   +LS
Sbjct: 271 RFCIGVRAGRQGELPKGSVRLGQSSTGATLYLEPKPAVELNNAEALLAEREEGEVVRVLS 330

Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
           +L+  +AK   ++  L+D V  +D+  ARA  A+W+ GV P  ++      +S   + G 
Sbjct: 331 MLSTLLAKRAPQLMRLVDCVTALDVVAARAKHARWLSGVRPAFTADPS---ESPFWVPGA 387

Query: 296 KHPLLLGSSLRSLSAASS-NSNPLKSDVENSE-------MTVGSLSKG-ISD-------- 338
            HP+L+   L  L    S + N    D + +        +T      G ++D        
Sbjct: 388 LHPVLMQRGLPPLPQPPSVDDNRFDRDFQAAPAWELRRVLTPDGPRPGELADGSAAGRGS 447

Query: 339 -----------FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA- 386
                       P P+D++V     VV ITGPNTGGKT ++KT GL +LM++AGL+LP  
Sbjct: 448 GGGAVDDRAALLPRPLDLRVPSSRAVVAITGPNTGGKTVTLKTAGLMTLMAQAGLFLPCD 507

Query: 387 -----------KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
                         PRL WFD +LADIGD QSL+QNLSTFSGHI RI  IL +    SLV
Sbjct: 508 PTARAEAAAAAAGTPRLAWFDRVLADIGDAQSLQQNLSTFSGHIRRIKQILAVAGPRSLV 567

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L+DE+GSGTDP EG ALA ++L  L ++  L + TTH+A+L    ++D R+ N +  F  
Sbjct: 568 LLDEVGSGTDPLEGAALARAVLDRLAEQAHLTLATTHHAELKRASEEDGRYVNVSMAFDT 627

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDR------------------------------ 525
            TLRPTYR+ WG+ G SNAL+IA+++GFDR                              
Sbjct: 628 ATLRPTYRLCWGAAGASNALDIAETLGFDRWRCGCRAVVLEARKMAAMMAASASAAAATA 687

Query: 526 -----------KIIQRAQKLVERLRPERQQHR---KSELYQSLMEERRKLESQARTAASL 571
                       I   A+ LV+++   RQ  R    ++  Q L  +R   E  +R  A+L
Sbjct: 688 EGGSSGEGRESHIAGVARSLVQQIEDTRQDSRYCITNDALQELEGQRALRERHSRNQATL 747

Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE--NQLRDA 629
            +E +   RE+E         AA L+A    ++ +E +   V++   ++ F   +Q +DA
Sbjct: 748 -SEALVQVRELE---------AALLEAP--PEIVRERDGHAVRVQAALEAFAAGSQPQDA 795

Query: 630 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL-ATV 688
               +   ++E ES I A V A R    +   + +     P  G+ V+V+S GD   A V
Sbjct: 796 ----VEEQLREIESLIPAEVAALR-GRGYVGDDDDEELLRP--GDSVYVRSRGDMGDARV 848

Query: 689 VEVPGDDDTV 698
           V V GD  TV
Sbjct: 849 VSVKGDMVTV 858


>gi|434384820|ref|YP_007095431.1| MutS2 family protein [Chamaesiphon minutus PCC 6605]
 gi|428015810|gb|AFY91904.1| MutS2 family protein [Chamaesiphon minutus PCC 6605]
          Length = 843

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 233/744 (31%), Positives = 369/744 (49%), Gaps = 116/744 (15%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
           L L  IED    L  A    +LS  E+  +  TL  +  + + +        DS +    
Sbjct: 66  LSLDGIEDFGDALERAAVQGMLSGKELHEIATTLAGMRKLRRTI--------DSEENIPV 117

Query: 99  LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
           L  L+ +     ELE+ I  CID +  +  DR+SE L  +R +    R R  + L+SL++
Sbjct: 118 LQGLVADVRTYPELEQDIYHCIDDRGDVT-DRSSEKLAQVRVQLKGLRDRIYKFLNSLIQ 176

Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
           +      Q+  I +PLIT+R  R  + +KASHK  +P G+  + S SG+T ++EP+  + 
Sbjct: 177 R------QSNAIQQPLITQRGDRFVIPVKASHKDAIP-GVVHDSSGSGSTLYVEPQQIIN 229

Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
             N   +L   E  E  A+L  LTA++ +   ++++L+     IDLA A+A ++ W++  
Sbjct: 230 LGNQLRQLQRQEQREIEAVLMALTAKVTEVVEDLEHLLVVATTIDLATAKARYSLWLEAN 289

Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
            P    ++   +   I +  ++HPLL+              +P+                
Sbjct: 290 PPRFVDRAASEY---ITLRQLRHPLLI------WKHRHEEGSPV---------------- 324

Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
                 VPID+ +  + RVV ITGPNTGGKT ++KTL + +LM+K GL++PA+    +PW
Sbjct: 325 ------VPIDLSIRPDIRVVTITGPNTGGKTVTLKTLAIVALMAKVGLFIPAREPVEIPW 378

Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELV------------------------- 429
           FDLILADIGD QSL+Q+LSTFSGHI RI  IL+ +                         
Sbjct: 379 FDLILADIGDEQSLQQSLSTFSGHIRRIGRILDAIGEEGGERGAGSTSTTLSVSGGDEEM 438

Query: 430 ----------------------SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
                                 +  SL+L+DE+G+GTDP+EG ALA ++LQYL DR  L 
Sbjct: 439 GSVRDDEETIDLQVSHSPIHPSTPSSLILLDEVGAGTDPAEGSALAIALLQYLADRAMLT 498

Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
           + +THY +L  LK +D+RFENA+ EF    L PTYR+LWG  G SNAL+IA+ +G + ++
Sbjct: 499 IASTHYGELKALKYQDSRFENASVEFDDVNLAPTYRLLWGIPGRSNALSIAQRLGLNPEV 558

Query: 528 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
           I+ A+  V  +    Q+   +E+   L  +RR  E++A  AA++  +    Y E+  +A 
Sbjct: 559 IENAKSQV--ILGATQE--VNEVIAGLEAQRRTQETKASEAANVLKQAEAFYLEVSQKAA 614

Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAA 647
            L  R   LK  + + VQ  +  AK +I  V++    QL+        +    SE  +  
Sbjct: 615 QLQAREQELKVNQERAVQAAIAEAKGEIAQVIR----QLQQGPQTAQAAQQATSE--LDG 668

Query: 648 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
           +     P      +      F P+ G+++ +  +G K   + EV  D+  + V++G M++
Sbjct: 669 VSSRRLPAKS---TPKPPVGFNPKVGDRIRIPKIGQKAEVLSEV-DDNGNLNVKFGIMKM 724

Query: 708 RVKKNNIRPIPNSKRKNAANPAPR 731
            V   +I  +   K    A P P+
Sbjct: 725 NVALADIESLTGEK----ATPPPK 744


>gi|443312975|ref|ZP_21042589.1| MutS2 family protein [Synechocystis sp. PCC 7509]
 gi|442777125|gb|ELR87404.1| MutS2 family protein [Synechocystis sp. PCC 7509]
          Length = 792

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 234/720 (32%), Positives = 377/720 (52%), Gaps = 70/720 (9%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
           +G    +  QIP   S  +S++LL QT     L    +  L    I+DI   +  A    
Sbjct: 27  LGSIAARNLQIP--ASQLQSEELLAQTKEVYDLETRLTTGLAFDGIQDIGDSVERAQLQG 84

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIG 117
           +L+ +E+  +  TL     + + +    ++         P+L +L+       ELE++I 
Sbjct: 85  ILAGNELLEIATTLFGARQLRRFIDNQPDI---------PVLTQLVSELRTYPELEQEIH 135

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
            CID +  +  DR+S  L  +R + K+    ++  L+ +  +  QA  + + +IT+R  R
Sbjct: 136 RCIDERGQVT-DRSSPILGDLRTQIKQLRTQINRSLQNILQR--QANAVQEQIITQRGDR 192

Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
             + +KA  K  +P GI  + S+SGAT ++EP G V   N   +L   E  EE AI   L
Sbjct: 193 FVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPSGVVPLGNQLRQLVRKEQVEEEAIRRTL 251

Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
           T  +A+   +++ L+     IDLA ARA ++ W+    P   +++       IN+  ++H
Sbjct: 252 TKLVAEVSEDLERLLAIATTIDLATARARYSFWLKANPPRFINRNDGEM---INLRQLRH 308

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
           PLL+            + N                        VP+D+ ++   RVV IT
Sbjct: 309 PLLVWQQ-----QHEQDRNV-----------------------VPVDLFIQPNIRVVTIT 340

Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
           GPNTGGKT ++KTLGLA+LM+K GL++PA+    +PWF+ +L DIGD QSLEQ+LSTFSG
Sbjct: 341 GPNTGGKTVTLKTLGLAALMAKVGLFIPAREPVEMPWFEQVLTDIGDEQSLEQSLSTFSG 400

Query: 418 HISRIVDILELV--SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
           HI RI  IL  +  S  SLVL+DE+G+GTDP EG ALA S+L YL +   L++ TTH+ +
Sbjct: 401 HIRRISRILTAIDKSGSSLVLLDEVGAGTDPVEGSALAISLLHYLANNAQLSIATTHFGE 460

Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           L  LK +D RFENA+ EF   +L PTYR+LWG  G SNAL IA+ +G   ++I+ A+K +
Sbjct: 461 LKALKYQDDRFENASVEFDEISLSPTYRLLWGIPGRSNALTIAERLGLKLEVIEEAKKHL 520

Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
                +  Q     +   L  +R++ E++A  A  L  +    Y+E+  +A  L  R   
Sbjct: 521 GGANDDVNQ-----VIAGLEAQRKRQETKATEAQKLLEQAERFYQEVSAKAAALQARERD 575

Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE-SAIAAIVEAHRP 654
           L+A +   VQ+ ++ AK +I  V++    +L+  +   +++    +E + IAA       
Sbjct: 576 LRASQDVVVQKAISEAKGEIAQVIR----RLQKGTVTAMDAQQATNELNQIAA------- 624

Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
            +  +        F PQ G+++ +  LG + A V+ +P D+  ++V++G M++ V   +I
Sbjct: 625 -NYVAPPPKPKPGFKPQIGDRLRIPKLG-QTAEVLSIPSDEGDLIVRFGIMKMTVNLEDI 682


>gi|81299422|ref|YP_399630.1| recombination and DNA strand exchange inhibitor protein
           [Synechococcus elongatus PCC 7942]
 gi|81168303|gb|ABB56643.1| MutS2 family protein [Synechococcus elongatus PCC 7942]
          Length = 796

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 241/722 (33%), Positives = 379/722 (52%), Gaps = 78/722 (10%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           +P   S  ES+ LL+QT+ A A+  + P  L  + + DI   L       +LS  E+  +
Sbjct: 40  LPLASSQAESEYLLSQTAEAQALELTLPQGLPFAGVFDIGEALARVERQAVLSGEELLQI 99

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLII 127
             TL A+  + ++L +AAE         +P L+ ++ +     ELE++I FCI+    + 
Sbjct: 100 ASTLAAMRQL-RRLIDAAE--------AAPTLQAIVADLRTYPELEQQIHFCIEDSGEVA 150

Query: 128 LDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
            DRAS+ L  IR ++++     ++ L+ LL+   + +FQ     + +I++R  R  + +K
Sbjct: 151 -DRASDALLGIRQQQRQVRSQILDRLNRLLRN-QSNLFQ-----ELVISRRSDRYVLPVK 203

Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
           A  K  +P GI  + SSSG+T ++EP+G +E NN   +L   E  E  A+   L+  IA 
Sbjct: 204 AGQKEAVP-GIVHDSSSSGSTLYIEPRGVIELNNQLRQLQRREEVECEAVRRRLSEAIAS 262

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
              +++ L+     +DLA ARA +   ++   P  ++ S      SI +  ++HPLLL  
Sbjct: 263 VSGDLETLLAIATTLDLAVARARYGLHLEANRPRFTASSE-----SICLRQLRHPLLLWQ 317

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                          + D + S               VP+  +++   +VV ITGPNTGG
Sbjct: 318 Q--------------RQDPDRSV--------------VPVSFQLQPSLKVVAITGPNTGG 349

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT ++K+LGLA LM++AGL++PA+    LPWF+ IL DIGD QSL+Q+LSTFSGHI RI 
Sbjct: 350 KTVTLKSLGLAGLMARAGLFVPAREPVDLPWFERILTDIGDEQSLQQSLSTFSGHIRRIG 409

Query: 424 DILEL--VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
            ILE   V+  SLVL+DE+G+GTDPSEG ALA ++L+YL D   L + TTHY +L  LK 
Sbjct: 410 RILEALPVAGASLVLLDEVGAGTDPSEGSALAIALLRYLADHATLTIATTHYGELKALKY 469

Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
           +D RFENA+ EF   TL PTYR+LWG  G SNAL IA+ +G    ++  A+  +E  R  
Sbjct: 470 QDDRFENASVEFDDRTLSPTYRLLWGIPGRSNALIIAERLGLSPAVVAEARSQLEGGR-- 527

Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
                   +   L  +RR  E +A  AA L  +   L+ E++ +  +L  R   L+ ++ 
Sbjct: 528 --DRDVDAVIAGLEAQRRDQEEKAAAAAQLLQQTEKLHAELQAKTAELREREQSLRQQQE 585

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEIN--SLIKESESAIAAIVEAHRPDDDFS 659
             +Q E+  A+ ++  VV+  +   +   A+     S   +S S  A  V A  P     
Sbjct: 586 VAIQSEIEQARQRVAKVVRRLQQGPKATKAERARQASETLKSLSQPAVTVVAPPP----- 640

Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
                   F PQ G+++ +  LG K+  V+ +  D   + V+ G +++ V   ++  +  
Sbjct: 641 -------GFQPQLGDRLRIPRLG-KVGEVLAIAPDRQELTVRCGILKLTVSYGDVESLQG 692

Query: 720 SK 721
            K
Sbjct: 693 EK 694


>gi|16330262|ref|NP_440990.1| recombination and DNA strand exchange inhibitor protein
           [Synechocystis sp. PCC 6803]
 gi|383322003|ref|YP_005382856.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
           GT-I]
 gi|383325172|ref|YP_005386025.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
           PCC-P]
 gi|383491056|ref|YP_005408732.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
           PCC-N]
 gi|384436323|ref|YP_005651047.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
 gi|451814420|ref|YP_007450872.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 6803]
 gi|3914083|sp|P73625.1|MUTS2_SYNY3 RecName: Full=MutS2 protein
 gi|1652751|dbj|BAA17670.1| DNA mismatch repair protein; MutS [Synechocystis sp. PCC 6803]
 gi|339273355|dbj|BAK49842.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
 gi|359271322|dbj|BAL28841.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
           GT-I]
 gi|359274492|dbj|BAL32010.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
           PCC-N]
 gi|359277662|dbj|BAL35179.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
           PCC-P]
 gi|407958177|dbj|BAM51417.1| recombination and DNA strand exchange inhibitorprotein [Bacillus
           subtilis BEST7613]
 gi|451780389|gb|AGF51358.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 6803]
          Length = 822

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 242/740 (32%), Positives = 367/740 (49%), Gaps = 96/740 (12%)

Query: 18  EESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           EES++LL QT A  ++  S         I DI   L     G L++  E+ A+  TL  V
Sbjct: 49  EESRELLAQTQAVESIENSPESNWHFKGIADITEPLARVERGGLVTGLELLAIAGTLAGV 108

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASE 133
             + + + E  +L+         L  L+     L ELE+ I  C+  D K   + +RAS 
Sbjct: 109 RRLRRVIEERDDLE--------ILQTLVAEVRTLPELEQAIHHCLGEDGK---VAERASP 157

Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
            L  IR + K   E +   L+K+  +  Q+  + + +IT+R  R  + IKA +K  +P G
Sbjct: 158 KLGEIRQKLKAVREQIQQKLQKIIQR--QSNALQEAVITQRGDRFVLPIKAGYKEQMP-G 214

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T ++EP+  VE  N   +    E  EE  IL  L+ ++ +   ++++L+ 
Sbjct: 215 IVHDSSASGNTLYVEPQAIVELGNKLRQARRQEQTEEERILRQLSDQVLEVLLDLEHLLA 274

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
               +DLA AR  ++ W+    P   +      +  I +  ++HPLL   + +    A  
Sbjct: 275 IATRLDLATARVRYSFWLGAHPPQWLTPGD---EKPITLRQLRHPLLHWQAEKEGGPAV- 330

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
                                      VPI + ++ + RV+ ITGPNTGGKT ++KTLGL
Sbjct: 331 ---------------------------VPITLTIDSQIRVIAITGPNTGGKTVTLKTLGL 363

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR-- 431
            +LM+K GLY+PAK    +PWF  ILADIGD QSL+QNLSTFSGHI RI+ IL+ +    
Sbjct: 364 VALMAKVGLYIPAKETVEMPWFAQILADIGDEQSLQQNLSTFSGHICRIIRILQALPSGV 423

Query: 432 ----------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
                            SLVL+DE+G+GTDP+EG ALA ++L++L D+  L V TTHY +
Sbjct: 424 QDVLDPEIDSPNHPIFPSLVLLDEVGAGTDPTEGSALAIALLRHLADQPCLTVATTHYGE 483

Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           L  LK +D RFENA+ EF  ++L PTYR+LWG  G SNAL IA+ +G    I+++A+  +
Sbjct: 484 LKALKYQDARFENASVEFDDQSLSPTYRLLWGIPGRSNALAIAQRLGLPLAIVEQAKDKL 543

Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
                +  Q     +   L  +RR+ E +A  A  L  E    Y+++  +A  L  R   
Sbjct: 544 GGFSEDINQ-----VIAGLESQRREQEQKAANAQKLLQETEIFYQQVSQKAASLQARERE 598

Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA----SADEINSLIKESESAIAAIVEA 651
           LK+ + Q+VQQ +  AK +I  V++  +     A     A EI   I+  + A  A    
Sbjct: 599 LKSYQDQEVQQAIAAAKEEIAKVIRQLQRGKPSAQKAQQATEILGQIQAEQKAKVA---- 654

Query: 652 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
                           + P  GE++ + S G + A V +V     TV V  G M++ V  
Sbjct: 655 -----------PKPIGYQPTVGERIRIPSFG-QTAEVTQVNATAQTVNVTLGLMKMTVPM 702

Query: 712 NNIRPIPNSKRKNAANPAPR 731
            +I  + N K+     P P+
Sbjct: 703 ADIESL-NGKK---VEPPPK 718


>gi|56750922|ref|YP_171623.1| recombination and DNA strand exchange inhibitor protein
           [Synechococcus elongatus PCC 6301]
 gi|56685881|dbj|BAD79103.1| DNA mismatch repair protein MutS [Synechococcus elongatus PCC 6301]
          Length = 796

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 240/722 (33%), Positives = 379/722 (52%), Gaps = 78/722 (10%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           +P   S  ES+ LL+QT+ A A+  + P  L  + + DI   L       +LS  E+  +
Sbjct: 40  LPLASSQAESEYLLSQTAEAQALELTLPQGLPFAGVFDIGEALARVERQAVLSGEELLQI 99

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLII 127
             TL A+  + ++L +AAE         +P L+ ++ +     ELE++I FCI+    + 
Sbjct: 100 ASTLAAMRQL-RRLIDAAE--------AAPTLQAIVADLRTYPELEQQIHFCIEDSGEVA 150

Query: 128 LDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
            DRAS+ L  IR ++++     ++ L+ LL+   + +FQ     + +I++R  R  + +K
Sbjct: 151 -DRASDALLGIRQQQRQVRSQILDRLNRLLRN-QSNLFQ-----ELVISRRSDRYVLPVK 203

Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
           A  K  +P GI  + SSSG+T ++EP+G +E NN   +L   E  E  A+   L+  IA 
Sbjct: 204 AGQKEAVP-GIVHDSSSSGSTLYIEPRGVIELNNQLRQLQRREEVECEAVRRRLSEAIAS 262

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
              +++ L+     +DLA ARA +   ++   P  ++ S      SI +  ++HPLLL  
Sbjct: 263 VSGDLETLLAIATTLDLAVARARYGLHLEANRPRFTASSE-----SICLRQLRHPLLLWQ 317

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                          + D + S               VP+  +++   +VV ITGPNTGG
Sbjct: 318 Q--------------RQDPDRSV--------------VPVSFQLQPSLKVVAITGPNTGG 349

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT ++K+LGLA LM++AGL++PA+    LPWF+ IL DIGD QSL+Q+LSTFSGHI RI 
Sbjct: 350 KTVTLKSLGLAGLMARAGLFVPAREPVDLPWFERILTDIGDEQSLQQSLSTFSGHIRRIG 409

Query: 424 DILEL--VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
            ILE   V+  SLVL+DE+G+GTDPSEG ALA ++L+YL D   L + TTHY +L  LK 
Sbjct: 410 RILEALPVAGASLVLLDEVGAGTDPSEGSALAIALLRYLADHATLTIATTHYGELKALKY 469

Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
           +D RFENA+ EF   TL PTYR+LWG  G SNAL IA+ +G    ++  A+  +E  R  
Sbjct: 470 QDDRFENASVEFDDRTLSPTYRLLWGIPGRSNALIIAERLGLSPAVVAEARSQLEGGR-- 527

Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
                   +   L  +RR  E +A  AA L  +   L+ E++ +  +L  R   L+ ++ 
Sbjct: 528 --DRDVDAVIAGLEAQRRDQEEKAAAAAQLLQQTEKLHAELQAKTAELREREQGLRQQQE 585

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEIN--SLIKESESAIAAIVEAHRPDDDFS 659
             +Q E+  A+ ++  VV+  +   +   A+     S   +S S  A  V A  P     
Sbjct: 586 VAIQSEIEQARQRVAKVVRRLQQGPKATKAERARQASETLKSLSQPAVTVVAPPP----- 640

Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
                   F PQ G+++ +  LG K+  ++ +  D   + V+ G +++ V   ++  +  
Sbjct: 641 -------GFQPQLGDRLRIPRLG-KVGEILAIAPDRQELTVRCGILKLTVSYGDVESLQG 692

Query: 720 SK 721
            K
Sbjct: 693 EK 694


>gi|87301320|ref|ZP_01084161.1| putative DNA mismatch repair protein MutS family protein
           [Synechococcus sp. WH 5701]
 gi|87284288|gb|EAQ76241.1| putative DNA mismatch repair protein MutS family protein
           [Synechococcus sp. WH 5701]
          Length = 800

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 232/723 (32%), Positives = 374/723 (51%), Gaps = 76/723 (10%)

Query: 11  IPFGKSLEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           +P      ES +LL +TS  L +  +    L      D+ G L     G      ++ AV
Sbjct: 37  LPLAADRSESLRLLAETSELLGLDGLIEGGLSFQGAADLTGTLRHCAKGGTAGGEDLLAV 96

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
             T +AV    ++  EA EL         P+  +L+ +   L ELE+++ FC++ +   +
Sbjct: 97  AST-QAVARRLRRQIEAPEL--------RPVCSQLMGDLRTLPELEQRLRFCLE-EGGRV 146

Query: 128 LDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
            DRAS +L  +R +    R+   + L  L+++      Q G +   +I +R  R  + +K
Sbjct: 147 ADRASPELAGLRQQLAGLRQLRRDRLQELMRR------QGGLLQDSVIAERNGRPVLAVK 200

Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
            +    LP G+  + S+SG+T F+EPK  +   N    L   E  EE  +L+ L+A +A+
Sbjct: 201 VTAASQLP-GLVHDSSASGSTVFIEPKAVITLGNQIRELEGRERQEEWRVLASLSALVAE 259

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
               ++ L   ++ +D+A ARA + QW+  V P LS+       + + +  ++HPLLL  
Sbjct: 260 EAPALEELHRVLVALDVALARARYGQWLGAVRPELSADPQ----APVLLRDLRHPLLLWQ 315

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
             R                   E  V           VP+ + V  E RVV ITGPNTGG
Sbjct: 316 ERR-----------------GGEAKV-----------VPVTVSVGAELRVVAITGPNTGG 347

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT ++K++GLA+LM++AGL+LP    P+LPW  L+LADIGD QSL+QNLSTFSGH+ RI 
Sbjct: 348 KTVTLKSVGLAALMARAGLFLPCSGTPQLPWCSLVLADIGDEQSLQQNLSTFSGHVRRIA 407

Query: 424 DILELVSRE-----SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
            ILE +        +LVL+DE+G+GTDP+EG ALA ++L++L +R  L + TTH+ +L  
Sbjct: 408 RILEALDAPAAPGATLVLLDEVGAGTDPTEGTALAIALLRHLAERARLTIATTHFGELKA 467

Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
           LK  D+RFENA+  F  +TL PTY + WG  G SNAL IA  +G D+ +I  A  L   L
Sbjct: 468 LKYADSRFENASVAFDSDTLSPTYHLQWGIPGRSNALAIASRLGLDQAVIAEANGL---L 524

Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
            P R +   +++ + L ++RR+ +  A  AA+L A    L+ E+    +    ++A L+ 
Sbjct: 525 AP-RGEGELNQVIRGLEDQRRRQQEAAEEAAALLARTELLHEELLQRWQQQQEQSAELQE 583

Query: 599 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
           +  Q ++  +   + ++  +++    +LR    D      +++   +  +   H P    
Sbjct: 584 QRRQALEHSIRDGQQEVRRIIR----RLRQGGGD--GERARQAGVRLKQLQVEHTPQPQ- 636

Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
                 TS + P+ GE++ + SLG K A V+E+  D   + V+ G +R++V  + I  + 
Sbjct: 637 ---RRATSGWRPEVGERIRLLSLG-KAAQVLEISADGRELSVRCGVLRLQVDLSGIESLQ 692

Query: 719 NSK 721
             K
Sbjct: 693 GEK 695


>gi|403379972|ref|ZP_10922029.1| recombination and DNA strand exchange inhibitor protein
           [Paenibacillus sp. JC66]
          Length = 788

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 230/723 (31%), Positives = 383/723 (52%), Gaps = 113/723 (15%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           I D+   +  A  G LL+P+E+     TL                 G  L+R+  +L++ 
Sbjct: 68  IRDVRPSVKRAKIGGLLNPAELLDTANTLNG---------------GRRLKRF--ILQMA 110

Query: 104 KNCNFLTELEEKIGFCIDCKLLI------------ILDRASEDLELIRAERK----RNME 147
           ++   LT L +K    +D K L             ++D AS++L  IR E +    R  E
Sbjct: 111 EDHE-LTLLADKAAQVMDLKDLADSILAKINEHAEVMDSASQELARIRQELRTGEARIRE 169

Query: 148 NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 207
            L+ +++  + Q      +  P+IT R  R  + +K  ++  +  G+  + S+SGAT FM
Sbjct: 170 KLEQMIRTPSTQKM----LQDPIITIRNDRYVIPVKQEYRSSI-GGMIHDQSASGATLFM 224

Query: 208 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 267
           EP+  V+ NN    LS  E  E   IL +LTAE+A++  EI + +D + E+D  FA+AG 
Sbjct: 225 EPQAVVQLNNRLRELSFKEEREIEKILGMLTAEVAEAADEIAFNLDILAELDFIFAKAGL 284

Query: 268 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 327
           A+      P+++ +        + I+  +HPL+                           
Sbjct: 285 AREFKATLPLMNDRGF------LKIKKGRHPLI--------------------------- 311

Query: 328 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 387
                    +D  VP+D+++  + + ++ITGPNTGGKT ++KT+GL SLM+ +GL++PA+
Sbjct: 312 --------AADAVVPLDVELGNQFQSIIITGPNTGGKTVTLKTIGLLSLMAMSGLFVPAE 363

Query: 388 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 447
           +  +L  FD I ADIGD QS+EQ+LSTFS H++ I+ IL+ ++ +SLVL+DE+G+GTDP+
Sbjct: 364 DSSQLCVFDGIFADIGDEQSIEQSLSTFSSHMTNIISILKEMTPKSLVLLDEVGAGTDPA 423

Query: 448 EGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
           EG ALA SIL+ +  R+G  +V TTHY++L     +     NA+ EF ++TL PTYR+L 
Sbjct: 424 EGSALAISILEAIH-RLGCRMVATTHYSELKAYAYERKGIVNASMEFDVQTLSPTYRLLV 482

Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQAR 566
           G  G SNA  IA+ +G D+KII  A+  V          R   +  +L E R   E++ +
Sbjct: 483 GVPGRSNAFAIAERLGLDKKIIDHARSQV-----GADDQRVESMIATLEENRLSAEAERK 537

Query: 567 TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 626
           +A  L+AE+  L +++E E   ++++ + L AK  QQ ++ +  A+ + + +++    +L
Sbjct: 538 SAEQLNAEVAALRQQLEKERSRMEQQRSQLLAKAEQQAEEAVKKARQEAEQIIR----EL 593

Query: 627 RDASADEINSLIKESESAIAAIVEAHRPDDD---------FSVSETNTSSFTPQFGEQVH 677
           R  + +E +S IKE +     ++EA R  D+          S S + + +   + G++V 
Sbjct: 594 RQMAMEERSS-IKEHK-----LIEAKRKLDEAVPQLDKKPVSGSRSGSKARAIEPGDEVL 647

Query: 678 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-----PIPNSKRKNAANPAPRL 732
           V+SLG K   VVE+ GD + V VQ G M++++ K ++      P+   ++K A     R 
Sbjct: 648 VRSLGQK-GHVVELSGDKE-VTVQLGIMKMKIAKTDLEKISAAPVKPVQQKTAVTGLKRS 705

Query: 733 RKQ 735
           R +
Sbjct: 706 RDE 708


>gi|254432766|ref|ZP_05046469.1| MutS2 family protein [Cyanobium sp. PCC 7001]
 gi|197627219|gb|EDY39778.1| MutS2 family protein [Cyanobium sp. PCC 7001]
          Length = 804

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 214/657 (32%), Positives = 330/657 (50%), Gaps = 92/657 (14%)

Query: 102 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 157
           L+     L ELE+++ F ++ +   + DRAS  LE +R +    R    E L  LL++ A
Sbjct: 122 LVAELRTLPELEQRLHFALE-EGGRVADRASAPLEAVRRQLKGLRAERRERLQELLRRHA 180

Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
             +         +I +R  R  + +KA     LP G+  + S+SG+T F+EP+  +   N
Sbjct: 181 PLL------QDTVIAERNGRPVLAVKAGAAAQLP-GLVHDSSASGSTVFVEPQAVISLGN 233

Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
               L   E   E A+L+ L+A +      ++ L   +L +D A ARA +  W+  V P 
Sbjct: 234 RLRDLEGRERELEQAVLAELSALVGAEAEALQQLHAVLLRLDAALARARYGAWLGAVRPD 293

Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
           L +  H  F    ++  + HPLLL    R    A                          
Sbjct: 294 LEADPHAPF----SLVDLSHPLLLWQQRREQGHAV------------------------- 324

Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
              VP+ I V  E RVV ITGPNTGGKT ++K+LGLA+LM++AGL+LP    PRLPW   
Sbjct: 325 ---VPVSITVGAELRVVAITGPNTGGKTVTLKSLGLAALMARAGLFLPCSGTPRLPWCGA 381

Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE----SLVLIDEIGSGTDPSEGVALA 453
           +LADIGD QSL+QNLSTFSGHI RI  IL  ++      +LVL+DE+G+GTDP EG ALA
Sbjct: 382 VLADIGDEQSLQQNLSTFSGHIRRIARILAALAEPRQGATLVLLDEVGAGTDPVEGSALA 441

Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
           T++L++L DR  L + TTH+ +L  LK  D RFENA+  F ++TL PTYR+ WG  G SN
Sbjct: 442 TALLRHLADRARLTIATTHFGELKALKYADPRFENASVAFDVDTLSPTYRLQWGIPGRSN 501

Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS--- 570
           AL IA+ +G    ++++AQ L+E          + E+ Q ++     LESQ +       
Sbjct: 502 ALAIAQRLGLSEAVLEQAQALLE-------PGGEGEVNQVIV----GLESQRQRQQEAAE 550

Query: 571 -----------LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 619
                      LH E++  + + + +       +A L+ +  +Q+++ +   + ++  ++
Sbjct: 551 EAAALLARTELLHEELLSRWHQQKQQ-------SAELQEQRRRQLERSIREGQQEVRRII 603

Query: 620 QDFENQLRDASA---DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQV 676
           +    Q  D SA    ++    +++   +  +   HRP  +          + P+ G++V
Sbjct: 604 RRL-RQGGDRSAAGRGQLGETARQAGQRLKQLEHQHRPAPE----RREHGGWMPEVGDRV 658

Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLR 733
            V SLG K A V+ +      + V+ G MR+ V    I  +   K    A P P +R
Sbjct: 659 RVLSLG-KAAEVLALADGGRELTVRCGVMRLTVPLEGIEGLQGEK---PAPPLPEVR 711


>gi|33866463|ref|NP_898022.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
           WH 8102]
 gi|33633241|emb|CAE08446.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
           WH 8102]
          Length = 812

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 233/737 (31%), Positives = 378/737 (51%), Gaps = 73/737 (9%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
           MG    +   +P  ++LE S++ L +T   A L  +    L    ++D+  +L     G 
Sbjct: 46  MGRDAARNLVLP--ETLEASRQRLAETVEMAVLDDLTEGGLSFRGVQDLTPVLLRCSKGG 103

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           + +  E+ AV  TL A   + +++ E       S         L+     L ELE+++ F
Sbjct: 104 VATGEELLAVAETLAAARRLRRQIDEPELRPACS--------ALIDTMVTLPELEQRLKF 155

Query: 119 CIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
            I+ +   I DRAS  L  +R +    R+   + L  LL+++A   F    +   +I +R
Sbjct: 156 SIE-EGGRIADRASAPLAWLRQQWHGLRQERRDKLQDLLRRLAP--F----LQDSVIAQR 208

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R  + +KA     +P G   + S+SG+T F+EP+  +   N    L      EE  +L
Sbjct: 209 HGRPVLAVKAGAVAQVP-GQVHDSSASGSTVFVEPRSVLTIGNRLTDLEGRIRDEERKVL 267

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
             L+A +A     +  L+  +L++DLA AR  + +++ G  P + + +   F      E 
Sbjct: 268 IELSAVVADDHPVLLQLVSILLQLDLALARGRYGRFLGGTAPRMEASAAAPF----RFET 323

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
           ++HPLL+    R+   A                             VPI ++V  + RVV
Sbjct: 324 LRHPLLVWQHKRAGGPAV----------------------------VPISMEVSVDLRVV 355

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
            ITGPNTGGKT ++K++GLASLM++AGL LP    P LPW   +LADIGD QSL+Q+LST
Sbjct: 356 AITGPNTGGKTVTLKSIGLASLMARAGLLLPCAGMPTLPWCAQVLADIGDEQSLQQSLST 415

Query: 415 FSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           FSGHI RI  ILE +      +LVL+DE+G+GTDPSEG ALATS+L+ L DR  L + TT
Sbjct: 416 FSGHIKRIGRILEALQSGPSPALVLLDEVGAGTDPSEGTALATSLLKALADRARLTIATT 475

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           H+ +L  LK  D RFENA+  F+ ETL PTY +LWG  G SNAL IA  +G D ++++ A
Sbjct: 476 HFGELKALKYNDARFENASVAFNAETLSPTYELLWGIPGRSNALAIASRLGLDDQVLEEA 535

Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
            +L   L P       S + + L E+R++ ++ A  AA+L A    L+ E+    +   +
Sbjct: 536 SQL---LAPAADGEVNS-VIRGLEEQRQRQQAAAEDAAALLARTELLHDELLQRWQKQKQ 591

Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA 651
           ++A  + +  Q++++ +   + ++ ++++    +LRD  AD      + +   +  + + 
Sbjct: 592 QSAERQEQGRQRLERSIRDGQKEVRSLIR----RLRDDRAD--GETARRAGQRLRRLEDR 645

Query: 652 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
           HRP+ +          + P+ GE++ + +LG K A V+ +  D   + V+ G MR  V+ 
Sbjct: 646 HRPEPE---RRQPLPGWRPEPGERIRLLALG-KAAEVLAISDDGMQLTVRCGVMRSTVEL 701

Query: 712 NNIRPIPNSKRKNAANP 728
           + +  +   K +  A P
Sbjct: 702 SGVESLDGRKPEPPAKP 718


>gi|260434383|ref|ZP_05788353.1| MutS2 family protein [Synechococcus sp. WH 8109]
 gi|260412257|gb|EEX05553.1| MutS2 family protein [Synechococcus sp. WH 8109]
          Length = 799

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 232/708 (32%), Positives = 376/708 (53%), Gaps = 73/708 (10%)

Query: 12  PFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
           P   SLEES++ L +T   A L  +    L    ++++  ++     G + S  E+ AV 
Sbjct: 42  PLPASLEESKQRLAETVEMAVLDDLTEGGLSFRGVQNLEPVVLRCSKGGVASGEELLAVA 101

Query: 70  RTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIIL 128
            TL A   + ++ T+  EL         P+   L++    L ELE+++ F ++ +   + 
Sbjct: 102 ETLAAARRL-RRQTDDPEL--------RPVCTALIETMVTLPELEQRLKFALE-EGGRVA 151

Query: 129 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
           DRAS  L  +R +    R+   + L  LL+++A  +  +      +I +R  R  + +KA
Sbjct: 152 DRASSALSALRHQWNGLRQERRDKLQELLRRLAPSLQDS------VIAERHGRPVLAVKA 205

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
                +P G   + S+SG+T F+EP+  +   N  V L +    EE  +L+ L+A +A+ 
Sbjct: 206 GAVSQVP-GQVHDSSASGSTLFVEPRSVLTMGNKLVELESRIRDEERKVLAELSALVAEE 264

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              +  ++  +  +DLA AR  + +W+ GV P L + S   F       G++HPLL+   
Sbjct: 265 ASVLNQVVAVLRALDLALARGRYGRWLGGVEPQLEAASEAPF----RFSGLRHPLLVWQH 320

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
            R+      +  P+                      VPI ++V  E RVV ITGPNTGGK
Sbjct: 321 KRA------DGPPV----------------------VPISLEVSPELRVVAITGPNTGGK 352

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++K++GLA+LM++AG+ LP    P LPW   +LADIGD QSL+Q+LSTFSGH+ RI  
Sbjct: 353 TVTLKSIGLAALMARAGMLLPCSGQPSLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGR 412

Query: 425 ILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
           ILE + R    +LVL+DE+G+GTDPSEG ALAT++L+ L DR  L + TTH+ +L  LK 
Sbjct: 413 ILEALHRGGSPALVLLDEVGAGTDPSEGTALATALLKALADRARLTIATTHFGELKALKY 472

Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
            D RFENA+  F+ ETL PTY +LWG  G SNAL IA  +G D  ++ +AQ+L   L P 
Sbjct: 473 DDARFENASVAFNPETLSPTYELLWGIPGRSNALAIATRLGLDSDVLHQAQQL---LAPG 529

Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
                 S + + L E+R++ ++ A  AA+L A    L+ E+    +   ++ A  + +  
Sbjct: 530 GDGEVNS-VIRGLEEQRQRQQAAAEDAAALLARTELLHEELLQRWQKQKQQTAQRQEQGR 588

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
           Q+++Q +   + ++ T+++    +LRD  AD      +++   + ++ + HRP  +    
Sbjct: 589 QRLEQSIRQGQKEVRTLIR----RLRDERAD--GETARKAGQRLRSLEDHHRPTPERRAP 642

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
           +     + P  G++V + +LG K A V+ +  D   + V+ G MR  V
Sbjct: 643 KPG---WRPSVGDRVRLLALG-KAADVLAITDDGLQLTVRCGVMRTTV 686


>gi|452823864|gb|EME30871.1| DNA mismatch repair protein MutS2 [Galdieria sulphuraria]
          Length = 902

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 229/713 (32%), Positives = 367/713 (51%), Gaps = 91/713 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQS--QPLDLSTIEDI-AGILNSAVSGQLLSPSEICAVRRTL 72
           S E++Q+ L +T+  +  M+S   P D     ++   I++ A  G LL+P E+  +  T 
Sbjct: 142 SKEQTQQYLMETNECIRFMESGYSPTDWMVGANLLENIVDRAQKGSLLTPRELYQIVSTT 201

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
            A++N WK+  ++   +      Y  L  +++N   + +LE+ I   +D K  I  D AS
Sbjct: 202 LAISN-WKQSLQSQSTN------YPLLYRIVENVVSMKDLEDSICRSVDEKEQI-RDNAS 253

Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
             L   R + +    ++  +L  +  Q      + +P+ T+R  R  + +KA+ +  +P 
Sbjct: 254 IRLYETRTQIRSTFVHIRKVLHSLLQQ--HEESLQEPIYTERFGRYVIPVKATRRNRVP- 310

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           GI  ++SSSG+T ++EP       N   +L + E      IL  L+ ++ ++   + Y+ 
Sbjct: 311 GIIQDISSSGSTLYIEPNSIRSLTNRMQQLRHIEEEAIEEILFDLSRKVCENADHLLYIS 370

Query: 253 DRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSIN---IEGIKHPLLLGSSLRSL 308
             + ++D   ARA F+Q ++G  P I+ S S+ +    ++   + G++HPLL  +S+   
Sbjct: 371 HAIFQLDWILARAQFSQQINGRFPTIVESFSNAALSCKVDAWKLRGVRHPLLERNSI--- 427

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                                           VPID +V      V ITGPNTGGKT ++
Sbjct: 428 --------------------------------VPIDFEVRPGVTAVCITGPNTGGKTVAL 455

Query: 369 KTLGLASLMSKAGLYLPA-KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           KT G+  LM+K GL++P  +N   +P+F+ I AD+GDHQS+ Q+LSTFS HI RI  I++
Sbjct: 456 KTFGIVILMTKVGLFVPCEQNDVHIPFFEDIFADVGDHQSVTQSLSTFSSHILRIQRIVQ 515

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
           L  + SLVL+DEIG+GTDP EG ALA S+L YL +RVG  + TTH+ +L  LK KD RFE
Sbjct: 516 LSHKRSLVLLDEIGTGTDPVEGCALAMSLLLYLVERVGFLMATTHHGELKTLKYKDARFE 575

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER------LRPE 541
           NA+ E    +LRPTYR++WG  G S+A+ IA+ +G D  I Q A+ +VE       L  E
Sbjct: 576 NASVELDTFSLRPTYRLIWGVAGRSSAIAIAQRLGLDNWITQSARSIVENGVDKLSLAIE 635

Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
             +  K    Q ++E + ++E + R    L  ++M    E E+  + L+      K    
Sbjct: 636 DIERTK----QQVIEMKEQIERKERELECLERQLM----EREERIQQLENEWIETKK--- 684

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDAS-----ADEINSLIKESESAIAAIVEAHRPDD 656
           Q ++Q+   A+ QI  V+++ +    DAS       E+ SL+ E +SA      +H    
Sbjct: 685 QALEQDFANAREQIAKVIKEVQRCGSDASLIMERKQELESLMLEQKSA------SHHD-- 736

Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
             SVS T         G+ V VK L  +   VVE   +    +V++G +RV+V
Sbjct: 737 --SVSGTKVRK-----GDWVLVKRLSSEPLQVVEGMNNKGDFMVRFGSIRVKV 782


>gi|317968912|ref|ZP_07970302.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
           CB0205]
          Length = 811

 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 231/761 (30%), Positives = 384/761 (50%), Gaps = 86/761 (11%)

Query: 6   VQKAQIPFGKSLEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPS 63
           V  A++P   + ++S   L +T+  LA+  +    L      D+   L     G + S  
Sbjct: 37  VVAARLPLATTRQQSVDWLAETTELLALDGLIEGGLSFQGAADLDHTLQLCAKGGVASGD 96

Query: 64  EICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCK 123
           ++ +V  TL A   + ++  +  EL   +     PL         L ELE+++ FCI+  
Sbjct: 97  DLLSVATTLAAARRL-RRQIDYPELRPVTTALVEPL-------RTLPELEQRLRFCIEDG 148

Query: 124 LLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
             +  DRAS  L  +R +    R    + L+ L+++ AA +         ++ +R  R  
Sbjct: 149 GRVA-DRASPPLSGLRRQLASVRMERRDRLNELIRRYAALL------QDTVVAERNGRPV 201

Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
           + +KA     LP G+  + S+SG+T F+EP+  +   N   +L   E   E A+L  L+A
Sbjct: 202 LAVKAGAGSQLP-GLVHDSSASGSTVFIEPQAVIPLGNRIRQLEGEEREAERAVLQELSA 260

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
            + + +  +++L   ++++DLA ARA ++ W+  V P L +       + + +EG++HPL
Sbjct: 261 LVGEEQPALEHLQQVLIQLDLALARARYSAWLGAVRPELEADPL----APLQLEGLRHPL 316

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           LL    R                     TV           VP+ I+VE   RVV ITGP
Sbjct: 317 LLWQERR-----------------QGGRTV-----------VPVTIRVESSLRVVAITGP 348

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++K++GLA LM++AGL++P K  P +PW   +LADIGD QSL+QNLSTFSGH+
Sbjct: 349 NTGGKTVTLKSVGLAVLMARAGLFVPCKGSPHVPWCQQVLADIGDEQSLQQNLSTFSGHV 408

Query: 420 SRIVDILELV----------SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
            RI  ILE +          +   LVL+DE+G+GTDP+EG ALA ++L+ L DR  L + 
Sbjct: 409 RRIARILEALPAAGSDLATQAGAQLVLLDEVGAGTDPTEGTALAIALLKQLADRARLTIA 468

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTH+ +L  LK  D RFENA+  F +E+L PTY + WG  G SNAL IA  +G D  ++ 
Sbjct: 469 TTHFGELKALKYDDPRFENASVAFDVESLSPTYHLQWGIPGRSNALAIATRLGLDGAVLD 528

Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
            AQ L   L P R +   +++   L  +R++ +  A  AA+L A    L+ E+    +  
Sbjct: 529 AAQAL---LAP-RGEGELNQVIAGLESQRQRQQEAAEEAAALLARTELLHEELLMRWQQQ 584

Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 649
             ++A L+ +  +Q+++ +   + ++  +++   +  R   + E+    + +   +  + 
Sbjct: 585 KEQSAELQEQRREQLERSIRDGQKEVRRIIRRLRHG-RGTGSSELGESARRAGQQLKQLE 643

Query: 650 EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
           + HRP  +      +   + P+ G++V V SLG K   V+ +  D   + V+ G MR+ +
Sbjct: 644 QQHRPLPE----RRDHKGWLPKVGDRVRVLSLG-KAGEVLSLSEDGRELSVRCGVMRLNL 698

Query: 710 KKNNIRPIPNSK------------RKNAANPAPRLRKQVCT 738
           + + I  +   K            R+N A+  P +R +  T
Sbjct: 699 ELSAIEGLQGEKPEPPQAQVSIRSRRNPASRGPEVRTERNT 739


>gi|119483388|ref|ZP_01618802.1| MutS 2 protein [Lyngbya sp. PCC 8106]
 gi|119458155|gb|EAW39277.1| MutS 2 protein [Lyngbya sp. PCC 8106]
          Length = 879

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 228/786 (29%), Positives = 380/786 (48%), Gaps = 138/786 (17%)

Query: 4   AVVQKAQIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           AVV +  +P  ++  E+ +LL QT  A  L +  +  L L  I+DI   L       +LS
Sbjct: 29  AVVTR-NLPIPQTPSETLELLAQTKEAYQLELQLTSGLSLQGIQDIGDALERVERHGILS 87

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCI 120
             E+  +  TL     + +++        D+ +   P+L EL+       ELE++I  CI
Sbjct: 88  GEELLNIATTLAGARQLRRQV--------DAHEEEVPVLAELVSELRTYPELEQEIHRCI 139

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
           D +  +  DRA+  L  IR + K   + +  +L+ +  +  +AG I + LIT+R  R  +
Sbjct: 140 DDRGDVT-DRANPKLTDIRIKLKSTRDRIYQILQSILQR--KAGAIQEQLITQRGDRFVI 196

Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
            +KA  KY +P GI  + S+ G T ++EPK  +E NN   +L   E  EE A+  +L+ +
Sbjct: 197 PVKAPQKYQVP-GIVHDTSAKGGTLYIEPKSTIELNNQLRQLQRREQLEEEAVRQVLSEQ 255

Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG---------------VCPILSSQSHVS 285
           IA+ + +++ L+  V  IDLA +RA +  W++                 C + S      
Sbjct: 256 IAEVQPDLERLLVIVTTIDLAVSRARYGLWLEANPPTFTNLKIQAEKVECVLPSDTDQTR 315

Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
           F + + +  ++HPLL+          +    P+                      VPID+
Sbjct: 316 FQNPVTLRQLRHPLLVWQQ------QNEQGTPV----------------------VPIDV 347

Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
            ++   RVV ITGPNTGGKT ++KT+G+A+LM+K GL++PA+    LPWFDL+LADIGD 
Sbjct: 348 TIKPSIRVVAITGPNTGGKTVTLKTIGMAALMAKVGLFIPAREPVELPWFDLVLADIGDE 407

Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS-------GTDPS----------- 447
           QS+EQ+LSTFSGHI RI  IL  +   ++  ++++         GTD S           
Sbjct: 408 QSIEQSLSTFSGHIRRISRILNAIPSANIGTVNQLSIPVTHQQLGTDDSEVEPVQNQQEE 467

Query: 448 -----------------------------------------EGVALATSILQYLRDRVGL 466
                                                    EG ALAT++LQYL +   +
Sbjct: 468 VEIIEEVDSLETLKAKIKDPEDQISNSLILLDEIGAGTDPTEGSALATALLQYLANSAVV 527

Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
            + TTH+ +L  LK +D RFEN++ EF  +TL+PTYR+LWG  G SNAL IA+ +G   +
Sbjct: 528 TIATTHFGELKALKYQDDRFENSSVEFDEKTLQPTYRLLWGIPGRSNALKIAQRLGLKSE 587

Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
           I++ A   +     +      +++   L  +R++ E++A  A+ L  E   L++E+  + 
Sbjct: 588 ILETAASYLGGTSQD-----VNDVIAGLEAQRKQQETKAEEASKLLKETERLHQELIRKT 642

Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV---QDFENQLRDASADEINSLIKESES 643
             L  R   LK ++ Q +++ L  AK +I  V+   Q  + + +DA         +++  
Sbjct: 643 ALLKEREQELKREQEQAIKETLIQAKGEIAQVIRRLQQGQPKAQDA---------QKATE 693

Query: 644 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
            +  I E   P       E          G+++ + S+G + A V+  P ++  ++V++G
Sbjct: 694 TLDKIAEQRLPSRQQKPPEKPKFKPK--VGDRIRIPSIG-QTAEVMNEPDENGQLMVRFG 750

Query: 704 KMRVRV 709
            M++ +
Sbjct: 751 IMKMSI 756


>gi|124022099|ref|YP_001016406.1| DNA mismatch repair protein MutS [Prochlorococcus marinus str. MIT
           9303]
 gi|123962385|gb|ABM77141.1| putative DNA mismatch repair protein MutS family protein
           [Prochlorococcus marinus str. MIT 9303]
          Length = 828

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 218/685 (31%), Positives = 355/685 (51%), Gaps = 74/685 (10%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
           L    + D+  IL     G + S  E+ AV  TL A   + +++ +         +    
Sbjct: 102 LSFQGVHDLGHILARCTKGGVASGEELLAVADTLAAARRLRRQINDP--------ELRPT 153

Query: 99  LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
           +  LL +   + ELE ++ F ++ +   + DR S  L  +R +    R+   + L  +++
Sbjct: 154 ISALLLDVATMPELERRLKFALE-EGGRVADRVSSKLAGLRRQWQGLRQERRDCLQEVIR 212

Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
           + AA +         +I  R  R  + +KA+    LP G+  + S+SG+T F+EP+  + 
Sbjct: 213 RHAAML------QDTVIADRHGRPVLAVKAAAVSQLP-GLVHDSSASGSTVFVEPQVVIT 265

Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
            +N    L      ++  +L+ L+A +A+S   I  L + +L++DLA AR  + QW+ GV
Sbjct: 266 LSNRLAELDGHIREQQQLVLAELSAAVAESGVSISRLGEVLLQLDLALARGRYGQWLGGV 325

Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
            P L +++   F    +++ ++HPLL+    R                E+ E  V     
Sbjct: 326 PPALHAEAAAPF----SLQELRHPLLVWQHRR----------------EHGEAVV----- 360

Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
                  PI ++V    +VV ITGPNTGGKT ++K++GLA LM++AGL LP    P +PW
Sbjct: 361 -------PISVEVSSTLKVVAITGPNTGGKTVTLKSVGLALLMARAGLLLPCTGSPSMPW 413

Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELV---SRESLVLIDEIGSGTDPSEGVA 451
              +LADIGD QSL+QNLSTFSGH+ RI  ILE +      +LVL+DE+G+GTDPSEG A
Sbjct: 414 CAQVLADIGDEQSLQQNLSTFSGHVKRIGRILEALIEGPGPALVLLDEVGAGTDPSEGTA 473

Query: 452 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 511
           LAT++L+ L DR  L + TTH+  L  LK  D+RFENA+  F  ET+ PTYR+ WG  G 
Sbjct: 474 LATALLRTLADRARLTIATTHFGKLKALKYGDSRFENASVAFDSETMLPTYRLQWGIPGR 533

Query: 512 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
           SNAL+IA  +G D  +I +AQ+L+            +E+ + L E+R   ++ A  AA+L
Sbjct: 534 SNALSIAMRLGLDDAVIAQAQELLGPC----GDGEVNEVIRGLEEQRSLQQAAAEDAAAL 589

Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
            A    L+ E+    +   +++A L+ +  Q+++  +   + ++  +++    +LR+  A
Sbjct: 590 LARTELLHEELLSRWQKQRKQSADLQEQGRQKLESSIREGQKEVRQLIR----RLREGRA 645

Query: 632 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS--SFTPQFGEQVHVKSLGDKLATVV 689
           D         ESA  A     R   D  +         + P+ GE++ + +LG K A V+
Sbjct: 646 D--------GESARRAGQRLRRIQADHRIQPQRKQHIGWRPEVGERIRLLALG-KAAEVI 696

Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNI 714
            +  D   + V+ G MR  V+ + +
Sbjct: 697 AISEDGKQLTVRCGVMRSTVELSGV 721


>gi|33863813|ref|NP_895373.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
           marinus str. MIT 9313]
 gi|33635396|emb|CAE21721.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
           marinus str. MIT 9313]
          Length = 828

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 217/692 (31%), Positives = 355/692 (51%), Gaps = 74/692 (10%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
           L    + D+  IL     G + S  E+ AV  TL A   + +++ +         +    
Sbjct: 102 LSFQGVHDLGHILARCSKGGVASGEELLAVADTLAAARRLRRQINDP--------ELRPT 153

Query: 99  LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
           +  LL +   + ELE ++ F ++ +   + DR S  L  +R +    R+   + L  +++
Sbjct: 154 ISSLLLDVATMPELERRLKFALE-EGGRVADRVSSKLAGLRRQWQGLRQERRDCLQEVVR 212

Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
           + AA +         +I  R  R  + +KA+    LP G+  + S+SG+T F+EP+  + 
Sbjct: 213 RHAAML------QDTVIADRHGRPVLAVKAAAVSQLP-GLVHDSSASGSTVFVEPQVVIT 265

Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
            +N    L      ++  +L+ L+A +A++   I  L + +L++DLA AR  + QW+ GV
Sbjct: 266 LSNRLAELDGRIREQQQLVLAELSAAVAEAGVSIGRLAEVLLQLDLALARGRYGQWLGGV 325

Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
            P L +++   F    +++ ++HPLL+    R    A                       
Sbjct: 326 PPTLHAEAAAPF----SLQELRHPLLVWQHRRDHGEAV---------------------- 359

Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
                 VPI ++V    +VV ITGPNTGGKT ++K++GLA LM++AGL LP    P +PW
Sbjct: 360 ------VPISVEVSSTLKVVAITGPNTGGKTVTLKSVGLALLMARAGLLLPCTGSPSMPW 413

Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVA 451
              +LADIGD QSL+QNLSTFSGH+ RI  ILE ++     +LVL+DE+G+GTDPSEG A
Sbjct: 414 CAQVLADIGDEQSLQQNLSTFSGHVKRIGCILEALNEGPGPALVLLDEVGAGTDPSEGTA 473

Query: 452 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 511
           LAT++L+ L DR  L + TTH+  L  LK  D+RFENA+  F  ET+ PTYR+ WG  G 
Sbjct: 474 LATALLRTLADRARLTIATTHFGKLKALKYGDSRFENASVAFDGETMLPTYRLQWGIPGR 533

Query: 512 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
           SNAL+IA  +G D  +I  AQ+L+            +E+ + L E+R   ++ A  AA+L
Sbjct: 534 SNALSIAMRLGLDGAVIAHAQELLGPC----GDGEVNEVIRGLEEQRSLQQAAAEDAAAL 589

Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
            A    L+ E+    +   +++A L+ +  Q+++  +   + ++  +++    +LR+  A
Sbjct: 590 LARTELLHEELLSRWQKQRKQSAALQEQGRQKLESSIREGQKEVRQLIR----RLREGRA 645

Query: 632 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS--SFTPQFGEQVHVKSLGDKLATVV 689
           D         ESA  A     R   D  +         + P+ GE++ + +LG K A V+
Sbjct: 646 D--------GESARRAGQRLRRIQADHRIQPQRKQHMGWRPEVGERIRLLALG-KAAEVI 696

Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
            +  D   + V+ G MR  V+ + +  +   K
Sbjct: 697 AISEDGKQLTVRCGVMRSTVELSGVESLDGLK 728


>gi|78212059|ref|YP_380838.1| MutS2 family protein [Synechococcus sp. CC9605]
 gi|78196518|gb|ABB34283.1| MutS2 family protein [Synechococcus sp. CC9605]
          Length = 799

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 228/707 (32%), Positives = 370/707 (52%), Gaps = 71/707 (10%)

Query: 12  PFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
           P   SL+ES++ L +T   A L  +    L    ++++  ++     G + S  E+ AV 
Sbjct: 42  PLPASLDESKQRLAETVEMAVLNDLTEGGLSFRGVQNLEPVVLRCSKGGVASGEELLAVA 101

Query: 70  RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
            TL A   + +++        D  +       L++    L ELE+++ F ++ +   + D
Sbjct: 102 ETLAAARRLRRQI--------DDPELRPVCTALIETMVTLPELEQRLKFALE-EGGRVAD 152

Query: 130 RASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
           RAS  L  +R +    R+   + L  LL+++A  +  +      +I +R  R  + +KA 
Sbjct: 153 RASSALSALRHQWNGLRQERRDKLQELLRRLAPSLQDS------VIAERHGRPVLAVKAG 206

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
               +P G   + S+SG+T F+EP+  +   N    L +    EE  +L+ L+A +A+  
Sbjct: 207 AVSQVP-GQVHDSSASGSTIFVEPRSVLTMGNKLAELESRIRDEERKVLAELSALVAEEA 265

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
             +  ++  +  +DLA AR  + +W+ GV P L   +   F  S    G++HPLL+    
Sbjct: 266 SALNQVVAVLRTLDLALARGRYGRWLGGVEPQLEPAAEAPFRFS----GLRHPLLVWQHK 321

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
           R+      +  P+                      VPI ++V  E RVV ITGPNTGGKT
Sbjct: 322 RA------DGPPV----------------------VPISVEVSPELRVVAITGPNTGGKT 353

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++K++GLA+LM++AG+ LP    P LPW   +LADIGD QSL+Q+LSTFSGH+ RI  I
Sbjct: 354 VTLKSIGLAALMARAGMLLPCSGQPSLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGRI 413

Query: 426 LELVSRES---LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           LE + R S   LVL+DE+G+GTDPSEG ALAT++L+ L DR  L + TTH+ +L  LK  
Sbjct: 414 LEALQRGSAPALVLLDEVGAGTDPSEGTALATALLKALADRARLTIATTHFGELKALKYD 473

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
           D RFENA+  F+ ETL PTY +LWG  G SNAL IA  +G D  ++ +AQ+L   L P  
Sbjct: 474 DARFENASVAFNPETLSPTYELLWGIPGRSNALAIATRLGLDSDVLHQAQQL---LAPGG 530

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
                S + + L E+R++ ++ A  AA+L A    L+ E+    +   ++ A  + +  Q
Sbjct: 531 DGEVNS-VIRGLEEQRQRQQAAAEDAAALLARTELLHEELLQRWQKQKQQTAQRQEQGRQ 589

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
           +++Q +   + ++ T+++    +LRD  AD      + +   + ++ + HRP  +    +
Sbjct: 590 RLEQSIRQGQKEVRTLIR----RLRDERAD--GETARRAGQRLRSLEDHHRPTPERRAPK 643

Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
                + P  G+ V + +LG K A V+ +  D   + V+ G MR  V
Sbjct: 644 PG---WRPAVGDHVRLLALG-KAADVLAITDDGLQLTVRCGVMRTTV 686


>gi|148241412|ref|YP_001226569.1| mismatch repair ATPase [Synechococcus sp. RCC307]
 gi|147849722|emb|CAK27216.1| Mismatch repair ATPase (MutS family) [Synechococcus sp. RCC307]
          Length = 793

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 219/714 (30%), Positives = 364/714 (50%), Gaps = 73/714 (10%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
           +    +LEE+Q+   +T+  L +       LS      G+ + +++ QL S         
Sbjct: 36  LQLAPTLEEAQRRQTETTELLVLDGLTEGGLS----FQGVSDHSITVQLCSKGGCAGADE 91

Query: 71  TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
            L+  + +        ++D D L+  +    LL+    L ELE+++ F I+ +   + DR
Sbjct: 92  LLQLADTLAAARRLRRQIDDDELRPVTT--ALLEGLRTLPELEQQLRFAIE-EGGRVADR 148

Query: 131 ASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           AS  L  +R    ++R+     L  L+++ A Q+         +I +R  R  + +KA  
Sbjct: 149 ASPPLAGLRRQLQSQRQERQSRLQELMRRWANQL------QDSVIAQRHGRPVLAVKAGA 202

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
              L  G   + S+SG T F+EP+  V   N    L   E  EE  +L  L+A +A    
Sbjct: 203 AGSL-QGQVHDSSASGNTLFIEPQAVVGLGNRIAELEAQEQKEERRVLLQLSAAVAAEGD 261

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
            +  + D + ++DL  ARA +  W+  + P L ++S         ++ ++HPLL+    +
Sbjct: 262 SLMAMQDCLAQLDLGLARARYGAWLGAIKPKLGTESW-------QLKDLRHPLLVWQERQ 314

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
               A                             VP+ +++E   RVV ITGPNTGGKT 
Sbjct: 315 EAGTAV----------------------------VPVSLQIEPPLRVVAITGPNTGGKTV 346

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++K+LGLA+LM+++GL+LP    P+LPW + +LADIGD QSL+QNLSTFSGH+ RI  IL
Sbjct: 347 TLKSLGLATLMARSGLFLPCSGTPQLPWCEAVLADIGDEQSLQQNLSTFSGHVRRIARIL 406

Query: 427 ELVSR------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
           E +SR       +LVL+DE+G+GTDPSEG ALAT++L++L D+V L+V TTH+ +L  LK
Sbjct: 407 EALSRLGAAPVPALVLLDEVGAGTDPSEGAALATALLRHLADQVQLSVATTHFGELKALK 466

Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
             D+RFENA+ EF   +LRPTYR+LWG  G SNAL +A+ +G    ++  A++L++    
Sbjct: 467 YDDSRFENASVEFDEVSLRPTYRLLWGIPGRSNALAVARRLGLSEAVLGGAEQLMD---- 522

Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
           E+     + +   L E+R++ +  A  AA+L      L+ E++   +   ++    + + 
Sbjct: 523 EQGTSSVNTVISGLEEQRQRQQEAAEEAAALLMRAELLHEELQQRWQQEQQQKQARQGEA 582

Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 660
            QQ+   +   + ++  +++   N   D  A       ++    + ++ + H P+   S 
Sbjct: 583 QQQLVGSIREGRKEVRQLIRRLRNPKADGEA------ARQVGQRLRSLEQEHAPE---SR 633

Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
            +     ++P  G++V + SLG K A V+    D   + V+ G MR+ V    I
Sbjct: 634 PQRQHRGWSPAAGDRVRLLSLG-KAAEVLSCSDDGQELQVRCGVMRLTVPLTGI 686


>gi|124025008|ref|YP_001014124.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
           marinus str. NATL1A]
 gi|123960076|gb|ABM74859.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
           marinus str. NATL1A]
          Length = 804

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 229/723 (31%), Positives = 377/723 (52%), Gaps = 86/723 (11%)

Query: 15  KSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           ++L  SQ+LL+QT    +L    ++ +    + D+  IL     G +    ++  V  TL
Sbjct: 52  RNLSLSQELLSQTLEIGSLDSSLNEGISFDGVHDLENILLICSKGGIAIGEDLLKVADTL 111

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           RA   + K + +         Q   P L ELLK+   L +L++ + F +D +   I DRA
Sbjct: 112 RAARKLRKLIFD---------QVIRPRLSELLKDVATLPDLQKLLEFGLD-EGGRIADRA 161

Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKYL 189
           S  L  +R  R RN   L    K +   I +   G +   +I++R  R  +  KA     
Sbjct: 162 SPKLSELR--RYRNSVRLQR--KDILQDIIRKYGGLLQDNIISERYGRPVLAFKAGTSDQ 217

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA-EETAILSLLTAEIAKSEREI 248
           +  G+  + S+SG T ++EP+  +   N   ++ +SEI+ EE  +L+  + E+  +   I
Sbjct: 218 IK-GMVHDSSASGNTIYVEPQVVISIGNRLAKI-DSEISDEERRLLADWSKEVGLNAIVI 275

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
            +L++ +L+I+ A +RA +++W++GV  IL  + H  F+    I+  +HPLL+ +     
Sbjct: 276 AHLVEILLQIEFALSRARYSKWLNGVPAILDQEEHSLFE----IKDFRHPLLVWN----- 326

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                       D    + TV           VP    V  + +VV ITGPNTGGKT ++
Sbjct: 327 ------------DFHEKKNTV-----------VPTSFDVAPDLKVVAITGPNTGGKTVAL 363

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI---SRIVDI 425
           K++GLA LM+KAGL LP    PRLPW   + ADIGD QSL+QNLSTFSGHI   SRI+D 
Sbjct: 364 KSIGLAVLMAKAGLLLPCTGSPRLPWCKNVFADIGDEQSLQQNLSTFSGHILRISRILDA 423

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           +++    +LVL+DE+G+GTDP+EG ALA ++LQ + +R  L + TTH+  L  LK  D+R
Sbjct: 424 IDVFPGTTLVLLDEVGAGTDPTEGTALAMALLQVMANRARLTIATTHFGQLKALKYSDSR 483

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
           FENA+  F  ET++PT+ + WG  G SNA+ I+K +G D ++I  AQK +    PER  +
Sbjct: 484 FENASVSFDSETIQPTFHLQWGIPGRSNAIEISKRLGLDEQVIISAQKFIN---PERVDN 540

Query: 546 RKSELYQSLMEERRKLESQARTAAS-------LHAEIMDLYREIEDEAKDLDRRAAHLKA 598
             +++ Q L ++R + +S A  AA+       LH E+++ +++   ++++ + +      
Sbjct: 541 -VNQVIQGLEKQRERQQSAAEDAAALLAKTELLHEELLNSWQKQRQQSEEFNEQGRFKLE 599

Query: 599 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
              ++ Q+E           V+    +LRD +A    + I  +   +  I + +R D   
Sbjct: 600 SSIREGQKE-----------VRHLIKRLRDQNASGETARI--AGQRLRQIEKGYRNDKRI 646

Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
           +    +T S+TP+ GE+V + S+G K   ++    D   + V  G  R +V    +  + 
Sbjct: 647 N----HTQSWTPKIGEKVRLSSIG-KAGEIISFSDDGMQLTVLCGVFRSKVNLTEVESLD 701

Query: 719 NSK 721
             K
Sbjct: 702 GQK 704


>gi|72383421|ref|YP_292776.1| MutS 2 protein [Prochlorococcus marinus str. NATL2A]
 gi|72003271|gb|AAZ59073.1| MutS 2 protein [Prochlorococcus marinus str. NATL2A]
          Length = 804

 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 229/723 (31%), Positives = 377/723 (52%), Gaps = 86/723 (11%)

Query: 15  KSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           ++L  SQ+LL+QT    +L    ++ +    + D+  IL     G +    ++  V  TL
Sbjct: 52  RNLSLSQELLSQTLEIGSLDSSLNEGISFDGVHDLENILLICSKGGIAIGEDLLKVADTL 111

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           RA   + K + +         Q   P L ELLK+   L +L++ + F +D +   I DRA
Sbjct: 112 RAARKLRKLIFD---------QVIRPRLSELLKDVATLPDLQKLLEFGLD-EGGRIADRA 161

Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKYL 189
           S  L  +R  R RN   L    K +   I +   G +   +I++R  R  +  KA     
Sbjct: 162 SPKLSELR--RYRNSVRLQR--KDILQDIIRKYGGLLQDNIISERYGRPVLAFKAGTSDQ 217

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA-EETAILSLLTAEIAKSEREI 248
           +  G+  + S+SG T ++EP+  +   N   ++ +SEI+ EE  +L+  + E+  +   I
Sbjct: 218 IK-GMVHDSSASGNTIYVEPQVVISIGNRLAKI-DSEISDEERRLLADWSKEVGLNAIVI 275

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
            +L++ +L+I+ A +RA +++W++GV  IL  + H  F+    I+  +HPLL+       
Sbjct: 276 AHLVEILLQIEFALSRARYSKWLNGVPAILDQEEHSPFE----IKDFRHPLLVW------ 325

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                      +D    + TV           VP    V  + +VV ITGPNTGGKT ++
Sbjct: 326 -----------NDFYEKKNTV-----------VPTSFDVAPDLKVVAITGPNTGGKTVAL 363

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH---ISRIVDI 425
           K++GLA LM+KAGL LP    PRLPW   + ADIGD QSL+QNLSTFSGH   ISRI+D 
Sbjct: 364 KSIGLAVLMAKAGLLLPCTGSPRLPWCKNVFADIGDEQSLQQNLSTFSGHILRISRILDA 423

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           +++    +LVL+DE+G+GTDP+EG ALA ++LQ + +R  L + TTH+  L  LK  D+R
Sbjct: 424 IDVFPGTTLVLLDEVGAGTDPTEGTALAMALLQVMANRARLTIATTHFGQLKALKYSDSR 483

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
           FENA+  F  ET++PT+ + WG  G SNA+ I+K +G D ++I  AQK +    PER  +
Sbjct: 484 FENASVSFDSETIQPTFHLQWGIPGRSNAIEISKRLGLDEQVIISAQKFIN---PERVDN 540

Query: 546 RKSELYQSLMEERRKLESQARTAAS-------LHAEIMDLYREIEDEAKDLDRRAAHLKA 598
             +++ Q L ++R + +S A  AA+       LH E+++ +++   ++++ + +      
Sbjct: 541 -VNQVIQGLEKQRERQQSAAEDAAALLAKTELLHEELLNSWQKQRQQSEEFNEQGRFKLE 599

Query: 599 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
              ++ Q+E           V+    +LRD +A    + I  +   +  I + +R D   
Sbjct: 600 SSIREGQKE-----------VRHLIKRLRDQNASGETARI--AGQRLRQIEKGYRNDKRI 646

Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
           +    +T S+TP+ GE+V + S+G K   ++    D   + V  G  R +V    +  + 
Sbjct: 647 N----HTQSWTPKIGEKVRLSSIG-KAGEIISFSDDGMQLTVLCGVFRSKVNLTEVESLD 701

Query: 719 NSK 721
             K
Sbjct: 702 GQK 704


>gi|87125334|ref|ZP_01081180.1| MutS 2 protein [Synechococcus sp. RS9917]
 gi|86167103|gb|EAQ68364.1| MutS 2 protein [Synechococcus sp. RS9917]
          Length = 798

 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 221/711 (31%), Positives = 357/711 (50%), Gaps = 86/711 (12%)

Query: 12  PFGKSLEESQKLLNQTS--AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
           P    L ES++ L ++   A L  +    L    + D+  +L     G       + AV 
Sbjct: 44  PLPSDLRESRERLARSIELAGLDGVVDGGLSFQGVHDLEPVLLRCCKGGTADGEALLAVA 103

Query: 70  RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
            TL A   + +++        D  +       LLK+   L +LE+++ F ++ +   + D
Sbjct: 104 DTLAAARRLRRQI--------DDPELRPRCTALLKDVATLPDLEQRLKFSLE-EGGRVAD 154

Query: 130 RASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
           RAS  L  +R +    R++  + L  ++++ A+Q+         +I +R  R  + +KA 
Sbjct: 155 RASAVLAGLRGQWQTVRQQRRDRLQEVIRRWASQL------QDTVIAERHGRPVLAVKAG 208

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
                P G+  + S+SG+T F+EP+  V+  N    L      EE  +L+ L+A +A   
Sbjct: 209 AVAQCP-GMVHDSSASGSTVFVEPRQVVDLGNRLADLEGRIREEEQRVLAELSAAVAAEG 267

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
             +  L   +L +DL+  RA + QW+  V P L +      ++ + +  ++HPLL+    
Sbjct: 268 EALTRLGAVLLVLDLSLTRARYGQWLGAVPPQLEADP----EAPLVLHDLRHPLLVWQER 323

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
           R+   A                             VPI ++V    RVV ITGPNTGGKT
Sbjct: 324 RAGGGAV----------------------------VPISVEVSSHLRVVAITGPNTGGKT 355

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++K++GLA+LM++AGL+LP    P LPW   +LADIGD QSL+Q+LSTFSGH+ RI  I
Sbjct: 356 VTLKSIGLAALMARAGLWLPCSGRPSLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGRI 415

Query: 426 LELV---SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           LE +   +  +LVL+DE+G+GTDPSEG ALAT++L+ L DR  L + TTH+ +L  LK  
Sbjct: 416 LEALHSGAAPALVLLDEVGAGTDPSEGTALATALLRSLADRARLTIATTHFGELKALKYS 475

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
           D RFENA+  F  +TL PTYR+LWG  G SNAL IA  +G D  +I +AQ+L   L P R
Sbjct: 476 DPRFENASVAFDSDTLSPTYRLLWGIPGRSNALAIATRLGLDADVIAQAQEL---LAP-R 531

Query: 543 QQHRKSELYQSLMEERRKLESQARTAAS-------LHAEIMDLYREIEDEAKDLDRRAAH 595
            +   + + + L ++R++ ++ A  AA+       LH E++  +     E+         
Sbjct: 532 AEGDVNAVIRGLEDQRQRQQAAAEDAAALLARTELLHEELLARWERQRQES--------- 582

Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPD 655
             ++  +Q +Q L  +       V+    +LRD  AD      +++   +  +   H+P 
Sbjct: 583 --SQRQEQGRQRLETSIRDGQKEVRRLIRRLRDGKAD--GETARQAGQRLRRLEADHKPR 638

Query: 656 DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
            +          + P+ GE++ + SLG K A V+ +  D   + V+ G +R
Sbjct: 639 PE----RREHRDWRPEVGERIRLLSLG-KAAEVLAISDDGCQLSVRCGVLR 684


>gi|352095971|ref|ZP_08956918.1| MutS2 protein [Synechococcus sp. WH 8016]
 gi|351677327|gb|EHA60476.1| MutS2 protein [Synechococcus sp. WH 8016]
          Length = 805

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 219/680 (32%), Positives = 355/680 (52%), Gaps = 74/680 (10%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
           L    + D+  +L     G   S  E+ +V  TL A   + +++      D D     S 
Sbjct: 79  LSFQGVSDLEMVLLRCCKGGTASGEELLSVAHTLAAARRLRRQID-----DPDLRPDCSA 133

Query: 99  LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
           LLE   N   L ELE+++ F ++ +   + +RASE LE +R +    R+   + L ++L+
Sbjct: 134 LLE---NVATLPELEQRLKFALE-EGGRVANRASESLEELRLQWQVARQERRDRLQAVLR 189

Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
           +  + +  A      +I +R  R  + +KA      P G+  + SSSG T F+EPK  + 
Sbjct: 190 RWTSLLQDA------VIAERHGRPVLAVKAGAASQCP-GMVHDSSSSGNTVFVEPKTVIG 242

Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
             N    L      EE  +L+ L+A +A+    I  LM  +L++DLA AR  + QW+  V
Sbjct: 243 LGNRLAALDGRIREEERRVLAELSAAVAEQNDAIARLMAVLLKLDLALARGRYGQWLGAV 302

Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
            P L +Q     D+   I  ++HPLL+    +   A     +                  
Sbjct: 303 PPRLDAQP----DAPFQILELRHPLLVWQQRKEGGAPVVPVS------------------ 340

Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
                     ++V  + RVV ITGPNTGGKT ++K++GLA+LM++AG+++P K  P LPW
Sbjct: 341 ----------VEVSEQLRVVAITGPNTGGKTVTLKSIGLAALMARAGMWIPCKGSPSLPW 390

Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS---RESLVLIDEIGSGTDPSEGVA 451
              +LADIGD QSL+Q+LSTFSGH+ RI  IL+ ++     +LVL+DE+G+GTDPSEG A
Sbjct: 391 CAQVLADIGDEQSLQQSLSTFSGHVKRIGSILQSIASGPSPALVLLDEVGAGTDPSEGTA 450

Query: 452 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 511
           LA ++L+ L +   L + TTH+ +L  LK  D+RFENA+  F  +TL PTY++LWG  G 
Sbjct: 451 LAIALLRNLANCARLTIATTHFGELKALKYSDSRFENASVAFDSDTLSPTYQLLWGIPGR 510

Query: 512 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
           SNAL IA  +GFD  +I++A++L   L+P       + + + L E+R++ ++ A  AA+L
Sbjct: 511 SNALAIATRLGFDSDVIEQARQL---LKPSGDGDVNA-VIRGLEEQRQRQQAAAEDAAAL 566

Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-S 630
            A    L+ E+    +   + +A  +    Q+++  +   + ++  +++   +Q  D  +
Sbjct: 567 LARTELLHEELLQRWEQQRKNSAQQQELGRQRLESSIRDGQKEVRHLIRRLRDQKADGET 626

Query: 631 ADEINSLIKESESAIAAIVE-AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
           A      +++ ES   ++ E  H P+            + P  GE++ + +L DK A V+
Sbjct: 627 ARRAGQRLRKLESNHRSVPERRHHPE------------WRPSVGERIRLLAL-DKAAEVL 673

Query: 690 EVPGDDDTVLVQYGKMRVRV 709
           EV  D   + V+ G MR  V
Sbjct: 674 EVSDDGQQLSVRCGVMRSMV 693


>gi|33239697|ref|NP_874639.1| mismatch repair ATPase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|33237222|gb|AAP99291.1| Mismatch repair ATPase (MutS family) [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
          Length = 805

 Score =  295 bits (756), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 216/672 (32%), Positives = 343/672 (51%), Gaps = 86/672 (12%)

Query: 50  ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNF 108
           IL  +  G +LS  E+ +V  TL+A   + +++        D L R  P++  LL +   
Sbjct: 90  ILLRSSKGGVLSGLELLSVAETLKAARRLRRQIY-------DPLSR--PIISSLLSDLAT 140

Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 164
           L EL+  I F ++ +   + DRASE L  +R +    R    + L  L++K  +      
Sbjct: 141 LPELQRLIEFGLE-EGGRVADRASEKLSELRRQVYILRIERRDLLKDLIRKCNS------ 193

Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
            +   +I +R +R  + +K+     L   I  N S+SG T F+EPK  +   N       
Sbjct: 194 FLQDTVIAERYNRPVLALKSGAIDQLLGTIHDN-SASGNTVFLEPKAVIPLGNRIEEFEA 252

Query: 225 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 284
             + EE  +L+  + E+  + + ++ L   +L ++ A ARA ++ W+ GV P +  +   
Sbjct: 253 KILVEEQRLLAYWSEEVGTNFQVLESLSQILLRLEFALARARYSNWLGGVAPQIRDEE-- 310

Query: 285 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 344
             D+   I+  +HPLL+                     E+ E           D  +PI 
Sbjct: 311 --DAPFIIQEFRHPLLIWQ-------------------EHYEQ---------GDVVIPIS 340

Query: 345 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 404
            +V  + RVV ITGPNTGGKT ++K++GLA LM+K GL+LP    P LPW + +LADIGD
Sbjct: 341 FEVSSDLRVVAITGPNTGGKTVTLKSIGLAILMTKLGLFLPCVGEPSLPWCNQVLADIGD 400

Query: 405 HQSLEQNLSTFSGHISRIVDILELV---SRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
            QSL+QNLSTFSGH+ RI+ IL+ +   S  S++L+DE+G+GTDP+EG ALA ++L+   
Sbjct: 401 EQSLQQNLSTFSGHVVRIIRILDAIAIRSGPSIILLDELGAGTDPTEGTALAIALLKTFA 460

Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
           DR  L + TTH+ +L  LK  D+RFENA+  F  ET+RPTY + WG  G SNAL IA+ +
Sbjct: 461 DRARLTIATTHFGELKALKYHDSRFENASVGFDSETIRPTYHLQWGIPGKSNALAIARRL 520

Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS-------LHAE 574
           G D  +  RAQ L+            +++ Q L E+R++ +  A  AA+       LH E
Sbjct: 521 GLDHLVANRAQDLI----GSNGVDNVNQVIQGLEEQRQRQQDAAEEAAALLARTEMLHDE 576

Query: 575 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
           +M  + +   +++D   R            ++EL  +  +    V++   +LRD SAD  
Sbjct: 577 LMSRWHKQCQQSEDFQERG-----------RKELEISIREGQVEVRELIRRLRDRSAD-- 623

Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 694
             + +++   +  I   HR    F     N  +++P+ G++V + S+G K   V+ V  D
Sbjct: 624 GEIARKTGQRLRRIENIHRQQKSFK----NERAWSPKAGDRVRLISIG-KAGEVISVSAD 678

Query: 695 DDTVLVQYGKMR 706
              + V  G  R
Sbjct: 679 GRQLTVMCGLFR 690


>gi|113953514|ref|YP_731592.1| MutS2 family protein [Synechococcus sp. CC9311]
 gi|113880865|gb|ABI45823.1| MutS2 family protein [Synechococcus sp. CC9311]
          Length = 805

 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 218/684 (31%), Positives = 357/684 (52%), Gaps = 72/684 (10%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
           L    + D+  +L     G   S  E+ +V  TL A   + +++      D D   R S 
Sbjct: 79  LSFQGVYDLEMVLLRCYKGGTASGEELLSVAHTLAAARRLRRQID-----DPDLRPRCSA 133

Query: 99  LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
           LLE   N   L ELE+++ F ++ +   + +RASE LE +R +    R+   + L ++++
Sbjct: 134 LLE---NVATLPELEQRLKFALE-EGGRVANRASESLEDLRLQWQVARQERRDRLQAVVR 189

Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
           + +  +         +I +R  R  + +KA      P G+  + SSSG T F+EPK  + 
Sbjct: 190 RWSTLL------QDTVIAERHGRPVLAVKAGAASQCP-GMVHDSSSSGNTVFVEPKTVIG 242

Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
             N    L      EE  +L+ L+A +A+    I  LM  +L++DLA AR  + QW+  V
Sbjct: 243 LGNRLAALDGRIRDEERRVLAELSAAVAEQNDVIDRLMAVLLKLDLALARGRYGQWLGAV 302

Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
            P L +++    DS  +I  ++HPLL+    +   A     +                  
Sbjct: 303 PPRLEAEA----DSPFHILELRHPLLVWQQRKEGGAPVVPVS------------------ 340

Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
                     ++V  + RVV ITGPNTGGKT ++K++GLA+LM++AG+++P    P LPW
Sbjct: 341 ----------VEVSEQLRVVAITGPNTGGKTVTLKSIGLAALMARAGMWIPCNGSPSLPW 390

Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVA 451
              +LADIGD QSL+Q+LSTFSGH+ RI  IL+ ++     +LVL+DE+G+GTDPSEG A
Sbjct: 391 CAQVLADIGDEQSLQQSLSTFSGHVKRIGSILQSIASGPAPALVLLDEVGAGTDPSEGTA 450

Query: 452 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 511
           LA ++L+ L +   L + TTH+ +L  LK  D+RFENA+  F  ++L PTY++LWG  G 
Sbjct: 451 LAIALLRNLANCARLTIATTHFGELKALKYSDSRFENASVSFDSDSLSPTYQLLWGIPGR 510

Query: 512 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
           SNAL IA  +GFD  +I++A++L   L+P       + + + L E+R++ ++ A  AA+L
Sbjct: 511 SNALAIATRLGFDSGVIEQARQL---LKPSGDGDVNA-VIRGLEEQRQRQQAAAEDAAAL 566

Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
            A    L+ E+    +   + +A  +    Q+++  +   + ++  +++    +LRD  A
Sbjct: 567 LARTELLHEELLQRWEQQRKNSAQQQELGRQRLESSIRDGQKEVRHLIR----RLRDQKA 622

Query: 632 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNT-SSFTPQFGEQVHVKSLGDKLATVVE 690
           D      + +   +  +   HR     SV E      + P  GE++ + +L DK A V+E
Sbjct: 623 D--GETARSAGQRLRKLESKHR-----SVPERRLHPEWRPSVGERIRLLAL-DKAAEVLE 674

Query: 691 VPGDDDTVLVQYGKMRVRVKKNNI 714
           V  D   + V+ G MR  V   ++
Sbjct: 675 VSDDGQQLSVRCGVMRSMVDLQSV 698


>gi|333978122|ref|YP_004516067.1| MutS2 protein [Desulfotomaculum kuznetsovii DSM 6115]
 gi|333821603|gb|AEG14266.1| MutS2 protein [Desulfotomaculum kuznetsovii DSM 6115]
          Length = 785

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 229/710 (32%), Positives = 348/710 (49%), Gaps = 91/710 (12%)

Query: 23  LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           +L QT+ A  +++ +P  D     DI   L   V G +L P E+    +TL A   + K 
Sbjct: 46  MLAQTTQARELLRLEPGADFGGWHDIRQYLQRVVRGAVLEPQELLETGQTLGACRRIRKF 105

Query: 82  LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
               AE  G    RY  L E+       TELE+KI   I      I D AS  L  IR  
Sbjct: 106 F---AERPG----RYPLLEEIALTIGNFTELEKKIARAI-LPGGEIADDASTALSTIRRR 157

Query: 142 RKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
            +R      E L+S+++  A Q +    +  P++T R  R  V +K  ++  +P GI  +
Sbjct: 158 LQRAQQQVKEQLESIVRSPAYQKY----LQDPIVTIREGRYVVPVKQEYRAQVP-GIVHD 212

Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
            S+SGAT F+EP   VE NN   RL  +E  E   IL  L+  +A    E+   ++ + +
Sbjct: 213 QSASGATLFIEPMAVVESNNEVRRLQVAEKQEIARILGELSGAVAARGEELALSLEALGQ 272

Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
           +D   ARA +++ +D V P L           +N+   +HPLL GS              
Sbjct: 273 LDFILARARYSEHLDAVEPRLLPAPR------LNLRQARHPLLSGSV------------- 313

Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
                                  VPI I V  +   +VITGPNTGGKT ++KT+GL +LM
Sbjct: 314 -----------------------VPISIHVGYQFDTLVITGPNTGGKTVTLKTVGLLALM 350

Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
           +++GL++PA     L  FD + ADIGD QS+EQ+LSTFS H++ IV IL  V + SLVL+
Sbjct: 351 AQSGLHIPAGEGSELGVFDEVFADIGDEQSIEQSLSTFSSHLTNIVQILNQVGQGSLVLL 410

Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
           DE+G+GTDP+EG ALA +IL+ L +     V TTHY++L        R ENA+ EF   T
Sbjct: 411 DELGAGTDPAEGAALAQAILERLHEMGAKTVATTHYSELKNFAYARERVENASVEFDAIT 470

Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 557
           L+PTYR+L G  G SNA  IA+ +G    +++RA+  +       +Q + ++L Q L   
Sbjct: 471 LKPTYRLLIGKPGSSNAFEIARRLGLAPDLVERARSFM-----TAEQVQVADLMQQLERA 525

Query: 558 RRKLESQARTAASLHAEIMDL---YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
           R++ E +   A  +  E   L   Y+ + DE   L  R   + A+  ++ +Q +  A+ +
Sbjct: 526 RQQAERELEEARRMRQEAEGLKERYQALRDE---LAARRESILARAREEARQLVKRARQE 582

Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVE-----AHRPDDDFSVSETNTS--- 666
            +  +++   +L D +A      I+E+   +A + E     A RP  +  V   + S   
Sbjct: 583 SEEAIRELRARLADEAARVREEAIREAREKLAVMQERLQVGAPRPKPEPGVIPESVSVGQ 642

Query: 667 -SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
             F P+F ++           TVV +P +   V VQ G +++ V    +R
Sbjct: 643 TVFLPRFNQR----------GTVVALP-EAGEVQVQVGMIKINVPLAELR 681


>gi|51892253|ref|YP_074944.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
           14863]
 gi|81692142|sp|Q67QE3.1|MUTS2_SYMTH RecName: Full=MutS2 protein
 gi|51855942|dbj|BAD40100.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 793

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 224/723 (30%), Positives = 345/723 (47%), Gaps = 73/723 (10%)

Query: 19  ESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
           E Q    +TS A  + +    + L  + D+   +  AV G +L P ++  V  T  +   
Sbjct: 42  EVQHRQAETSEARRLYEGGHAIPLGGLHDLRAHVQRAVRGGVLDPGDLLDVADTAASSRR 101

Query: 78  VWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
           + + L E         Q   P+L  L +       LE +I   +D    +  D +    E
Sbjct: 102 LKRFLEE---------QEGLPILTALSRMLGTFHHLEAEIRQAVDEHGEVRDDASPALAE 152

Query: 137 LIRAER---KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           + R+ R    R  E LD+ ++  AA+  Q      P++T R  R  V +K  ++  +P G
Sbjct: 153 IRRSMRILQNRMKERLDAFVRGSAAKYLQ-----DPIVTIREGRFVVPVKIEYRAQVP-G 206

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG+T F+EP   VE NN    L+  E  E   IL+ L++ +A     +   + 
Sbjct: 207 IVHDQSASGSTLFIEPMAIVEMNNDLRELALKEHEEVERILARLSSLVAGEADALLDTLQ 266

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V +ID A A+   +  +D   P L        +  + I   +HPLL G           
Sbjct: 267 AVAQIDFASAKGKLSLDLDCTEPELVR------EPILEIHKGRHPLLKGRV--------- 311

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
                                      VPID+ +      +VITGPNTGGKT ++KT+GL
Sbjct: 312 ---------------------------VPIDVHIGITFDTLVITGPNTGGKTVALKTMGL 344

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM++AGL+LPA +  R+  F  +  DIGD QS+EQ+LSTFSGH++ I+ IL+ +   +
Sbjct: 345 FVLMAQAGLHLPAGHGTRVGVFQQVFVDIGDEQSIEQSLSTFSGHMTNIIRILDALEGPA 404

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL+DE+G+GTDP+EG ALA SIL++L  R    V TTHY++L       +R ENA+ EF
Sbjct: 405 LVLLDELGAGTDPTEGAALAMSILEHLHKRGAKTVATTHYSELKTYAYTRSRVENASVEF 464

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            +ETLRPT+R+L G  G SNA  I++ +G    I+ RA++ +      ++Q R  +L Q 
Sbjct: 465 DVETLRPTFRLLIGVPGSSNAFEISRRLGLSPHIVDRARQFL-----TQEQERVEDLIQG 519

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           +   R +LE +   A  L AE   +  E E    D  R+AA    K   Q QQ L  A+ 
Sbjct: 520 IHATRAELEKERAEAHRLRAEAQRMREEYERRYGDAQRKAAETVEKARAQAQQILATARR 579

Query: 614 QIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS---SFTP 670
           + + V+ + +  LR+    E    I+ + S +A   +A  P ++   +           P
Sbjct: 580 EAEAVIAELKQALREQREAERMQAIQSARSRLARARQAVEPTEEEQRARRRGEVPRGLKP 639

Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
             G++V V SL D    V+  P  D  VLVQ G +++ V   ++      +    A    
Sbjct: 640 --GDKVRVVSL-DTTGYVLSEPDADGNVLVQAGILKMTVSLTDLERASEEQPAAGAGGPA 696

Query: 731 RLR 733
           R+R
Sbjct: 697 RMR 699


>gi|116073767|ref|ZP_01471029.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
           RS9916]
 gi|116069072|gb|EAU74824.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
           RS9916]
          Length = 804

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 227/718 (31%), Positives = 374/718 (52%), Gaps = 80/718 (11%)

Query: 17  LEESQKLLNQTS--AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           LE S++ L ++   A L  +    L    + D+  +L     G +    E+  V  TL A
Sbjct: 54  LEASRQWLARSIELAGLDGVTEGGLSFQGVHDLDAVLKRCSKGGVADGEELLEVADTLAA 113

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
              + +++     +D D      PL  EL        ELE+++ F ++ +   + DRAS 
Sbjct: 114 ARRLRRQI-----VDPD----LRPLCTELFNAVATFPELEQRLKFSLE-EGGRVADRASA 163

Query: 134 DLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L  +R +    R++  + L  ++++ +AQ+         +I +R  R  + +KA     
Sbjct: 164 ALAGLRLQWQSLRQQRRDRLQDVMRRWSAQL------QDTVIAERHGRPVLAVKAGAVGH 217

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE---IAEETAILSLLTAEIAKSER 246
              G+  + S+SG T F+EP+  +E  N   RL+  E     EE  +L+ L+  + +   
Sbjct: 218 C-KGMVHDSSASGNTVFVEPQAVIELGN---RLAAQEGRIREEEQRVLAELSTAVGEQHD 273

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
            +  L + +L +DL  ARA + QW+ GV P L +      D+   +E ++HPLL+    R
Sbjct: 274 PLTKLGEVLLLLDLTLARARYGQWLGGVPPRLEADP----DAPFALEQLRHPLLVWQQKR 329

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
              A          DV                  VPI I V  + RVV ITGPNTGGKT 
Sbjct: 330 EYGA----------DV------------------VPISITVAGDLRVVAITGPNTGGKTV 361

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++K++GLA+LM++AGL+LP +  P LPW  L+LADIGD QSL+Q+LSTFSGH+ RI  IL
Sbjct: 362 TLKSIGLAALMARAGLWLPCQGTPSLPWCALVLADIGDEQSLQQSLSTFSGHVKRIGRIL 421

Query: 427 ELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
             + +    +LVL+DE+G+GTDPSEG ALAT++L+ L DR  L + TTH+ +L  LK  D
Sbjct: 422 AALDQGATPALVLLDEVGAGTDPSEGTALATALLRSLADRARLTIATTHFGELKALKYSD 481

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
           +RFENA+  F  ETL PTY++LWG  G SNAL IA  +G D ++I++A+ L   L P+  
Sbjct: 482 SRFENASVAFDSETLSPTYQLLWGIPGRSNALAIATRLGLDPQVIEQARGL---LSPQAD 538

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
               + + + L E+R++ ++ A  AA+L A    L+ E+    +   ++++  + +  Q+
Sbjct: 539 GDVNA-VIRGLEEQRQRQQAAAEDAAALLARTELLHEELLGRWERQRQQSSLQQEQGRQR 597

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
           ++  +   + ++  +++    +LRD  AD      +++   +  +   HRP    +    
Sbjct: 598 LETSIRDGQKEVRRLIR----RLRDQKAD--GETARKAGQRLRRLEADHRP----APERR 647

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
               + PQ G+++ + +LG K A V+ +  D   + V+ G MR  V+ + +  +   K
Sbjct: 648 RHPDWRPQVGDRIRLLALG-KAAEVLSISDDGLQLTVRCGVMRSTVELSAVESLDGRK 704


>gi|357039259|ref|ZP_09101053.1| MutS2 protein [Desulfotomaculum gibsoniae DSM 7213]
 gi|355358158|gb|EHG05926.1| MutS2 protein [Desulfotomaculum gibsoniae DSM 7213]
          Length = 788

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 212/668 (31%), Positives = 346/668 (51%), Gaps = 74/668 (11%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G LL P E+  V +TL A   +    +E      DS   Y+ L E+        +LE+ I
Sbjct: 81  GALLDPQELWHVLQTLTACRQIKNFFSERQ----DS---YTRLNEIAMGLGSFKDLEKMI 133

Query: 117 GFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
              I      +LDRASE L  IR    + ++R  + L+ +++  + Q +    +  P++T
Sbjct: 134 ASAI-APGGEVLDRASERLFNIRRRLASAQQRIKDRLNEIIRSTSYQKY----LQDPIVT 188

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR-LSNSEIAEET 231
            R  R  V +K  ++  LP GI  + S+SGAT F+EP   VE NN EVR L   E  E T
Sbjct: 189 MREGRYVVPVKQEYRSQLP-GIVHDQSASGATLFIEPMPVVEANN-EVRGLMAEEKQEVT 246

Query: 232 AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
            IL+ L+A + +   E+ Y ++ +  +D   A+A +++ +D   P +++      ++ ++
Sbjct: 247 RILTELSAAVGRQAEELLYALENLARLDFIMAKARYSESLDAWAPCIAT------EAKLD 300

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
           I   +HPLL                P+K+                    VPI I++    
Sbjct: 301 IRQGRHPLL----------------PVKA--------------------VPISIQLGEAF 324

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
            ++VITGPNTGGKT S+KT+GL  LM+ +GL++PA++   +  FD + ADIGD QS+EQ+
Sbjct: 325 DMLVITGPNTGGKTVSLKTVGLLVLMAHSGLHVPAEDGTLIGMFDQVFADIGDEQSIEQS 384

Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           LSTFS H   IV+IL+    +SLVL+DE+G+GTDP+EG ALA +IL  LR +    V TT
Sbjct: 385 LSTFSSHTINIVNILKKAGNKSLVLLDELGAGTDPTEGSALARAILDQLRQQGAKVVATT 444

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY +L      + R ENA+ EF+ +TLRPTYR+L G  G SNA  IA  +G +  +IQRA
Sbjct: 445 HYGELKSYAFANERVENASVEFNSQTLRPTYRLLIGRPGRSNAFEIALRLGLNESVIQRA 504

Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE-AKDLD 590
           +  +       +Q + ++L + L   R + E +   A  +  E  + YRE   E A+ + 
Sbjct: 505 RGFL-----TEEQVQVADLMRELENARVQAEQEQAEAEKIRRE-AEQYREQYMELAEKIR 558

Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI-- 648
           +R   +  +     ++ +  A+++ + +V++    L++ +       I  +   +  +  
Sbjct: 559 QRKDEIITRAVADSREMVKKARLEAEQLVEELRAALKEQTTHNREQSISNARQCLKQLQL 618

Query: 649 -VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
            ++A  P + +       ++  P  G++V +   G +   V+E PG DD V VQ G +R+
Sbjct: 619 KIDAKAPQNAYEHPTEAVTNVKP--GDEVFIPKYGQR-GVVLEAPGQDDQVQVQVGMIRM 675

Query: 708 RVKKNNIR 715
            + +  +R
Sbjct: 676 TIARQELR 683


>gi|88807280|ref|ZP_01122792.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
           WH 7805]
 gi|88788494|gb|EAR19649.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
           WH 7805]
          Length = 794

 Score =  288 bits (736), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 226/730 (30%), Positives = 364/730 (49%), Gaps = 78/730 (10%)

Query: 16  SLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
           SL++S  L  QT    +L  +    L    + D+A  L     G   S  E+  V  TL 
Sbjct: 41  SLQDSLALQAQTLEMGSLDGVLEGGLSFQGVSDLARTLLRCSKGGTASGEELLDVANTLA 100

Query: 74  AVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
           A   + +++ E             P+   LL++     +LE+++ F I+ +   + DRAS
Sbjct: 101 AARRLRRQIDEP---------ELRPVCTTLLRDVATFPDLEQRLKFAIE-EGGRVADRAS 150

Query: 133 EDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L+ +R +    R R  + L  ++++ AA +         +I +R  R  + +KA    
Sbjct: 151 PGLDGLRRQWQELRARRRDRLQDVIRRWAAHL------QDTVIAERHGRPVLAVKAGAGG 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
             P G+  + S+SG+T F+EPK  ++  N    +      EE  +LS L+A +A+    +
Sbjct: 205 QCP-GMVHDSSASGSTMFVEPKSVIDLGNKLADVDGRIREEEQRVLSELSAAVAEQVEGL 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           ++LM  +L++DLA AR  + QW+  V P L S    + D+   +  ++HPLL+       
Sbjct: 264 QHLMQVLLKLDLALARGRYGQWLGAVPPRLES----AVDAPFELRTLRHPLLVWQE---- 315

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
               +   P    V     +                       RVV ITGPNTGGKT ++
Sbjct: 316 ---RNEQGPTVVPVSVEVSSS---------------------LRVVAITGPNTGGKTVTL 351

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           K++GLA+LM++AGL++P    P LPW   +LADIGD QSL+Q+LSTFSGH+ RI  ILE 
Sbjct: 352 KSIGLAALMARAGLWVPCSGSPTLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGRILEA 411

Query: 429 VSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           +      +LVL+DE+G+GTDPSEG ALAT++L+ L DR  L V TTH+ +L  LK  D R
Sbjct: 412 IRSGPAPALVLLDEVGAGTDPSEGTALATALLRTLADRARLTVATTHFGELKALKYSDAR 471

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
           FENA+  F  ETL PTY +LWG  G SNAL IA  +G +  +I  A+ L+  +       
Sbjct: 472 FENASVAFDSETLSPTYHLLWGIPGRSNALAIATRLGLEGSVIDEARALLAPV----GDG 527

Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
             + + + L E+R + ++ A  AA+L A    L+ E+    +   + +A  + +  Q+++
Sbjct: 528 EVNTVIRGLEEQRMRQQAAAEDAAALLARTELLHEELLQRWEKQKQHSAERQEQGRQRLE 587

Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD--DFSVSET 663
             +   + ++  +++    +LRD  AD         E+A  A     + +D         
Sbjct: 588 TSIRAGQKEVRQLIR----RLRDDGAD--------GETARQAGQRLRKLEDRHRPEPERR 635

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
               + PQ G+++ + +LG K A V++V  D   + V+ G MR  V+ + +  +   K  
Sbjct: 636 RHQGWRPQVGDRIRLLALG-KAAEVLKVSDDGLQLQVRCGVMRSTVELSAVESLDGRKPD 694

Query: 724 NAANPAPRLR 733
             A P  ++R
Sbjct: 695 PPAAPVVQVR 704


>gi|302854502|ref|XP_002958758.1| hypothetical protein VOLCADRAFT_121755 [Volvox carteri f.
            nagariensis]
 gi|300255866|gb|EFJ40148.1| hypothetical protein VOLCADRAFT_121755 [Volvox carteri f.
            nagariensis]
          Length = 1442

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 252/774 (32%), Positives = 366/774 (47%), Gaps = 126/774 (16%)

Query: 8    KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI-- 65
            + Q+P G+S EES+ LL QT+ AL       +++    DI   + +A +G  L+  ++  
Sbjct: 421  RGQLPRGRSREESELLLQQTAEAL----EANIEVRDCFDIRPAVEAAAAGVCLNAKQLES 476

Query: 66   -CAVRRTLRAVNNVWKKLTEAAELDGDSLQ-----------RYSPLLELLKNCNFLTELE 113
             C +  +L    +V +    A+ L+                RY  L  L +      E E
Sbjct: 477  LCTI--SLFLYLHVGRMQGVASTLESAFAVKAAATAPPHRYRYPSLAALAEG----IEEE 530

Query: 114  EK-----IGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
            E+     I  CI  K   + D ASE L  +RAER+ N E L   ++  A  + Q G  + 
Sbjct: 531  ERTLLRAIRACI--KFGSVCDDASESLAAVRAERQSNKERLRKEVEGWARSMQQRGAAEA 588

Query: 169  PLITKRRSRMCVGIKASHKYLLPDG-IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
              +   R R CVG+++  +  LP G + L+ SSSGAT +MEP+  V+ NNME  L   E 
Sbjct: 589  GAVAIVRGRFCVGVRSGRQGELPRGSVRLSSSSSGATVYMEPQPCVDLNNMEAVLGEREE 648

Query: 228  AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
             E   +L LL+  +     ++  L+  V  +DL  ARA  ++WM    P    +      
Sbjct: 649  QEVQKVLGLLSKMLGTRVPQLLSLLGSVTSLDLVAARARHSRWMGATRPEF--EEFGPGA 706

Query: 288  SSINIEGIKHPLLLGSSLRSLSAASS-NSNPLKSDVE----------------------- 323
            S +++ G  HPLL+   L  L  A S + N    D +                       
Sbjct: 707  SPLHVPGALHPLLMQRGLPPLPQAPSVDDNRFDRDFQAAPAWELRRVVVPDGPRSGELPE 766

Query: 324  ---NSEMTVG---SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
                + +T G   ++S   S  P P+D++V     VV ITG    GKT ++K  GL  LM
Sbjct: 767  YGSTTAVTDGGSATVSGSSSLLPRPLDLRVPPGKAVVAITG----GKTVTLKAAGLMVLM 822

Query: 378  SKAGLYLP--------AKNH----------------PRLPWFDLILADIGDHQSLEQNLS 413
            ++AGL+LP           H                PRL WFD +LADIGD QSL+QNLS
Sbjct: 823  AQAGLFLPYTAASGISTATHGSPPCPRATTSGLTPRPRLVWFDRVLADIGDAQSLQQNLS 882

Query: 414  TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
            TFSGHI RI  IL      SLVL+DE+GSGTDP EG ALA ++L  L  +  L + TTH+
Sbjct: 883  TFSGHIRRIRGILATAGPGSLVLLDEVGSGTDPLEGAALARAVLDRLAGQARLTLATTHH 942

Query: 474  ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK---IIQR 530
            A+L    ++D R+ N +  F   +LRPTYR+ WG+ G SNAL+IA+++GFDR+   I   
Sbjct: 943  AELKRAAEEDGRYVNVSMAFDTASLRPTYRLCWGAAGASNALDIAEALGFDRQDSHIAVV 1002

Query: 531  AQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
            A+ LV +L   RQ+          +E +R L  +   A S   E +   RE+E + K   
Sbjct: 1003 ARSLVRQLDETRQE----------LEAQRALRQRLEAAQSRLQETVSAVREMERQLK--- 1049

Query: 591  RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADE----INSLIKESESAI 645
                 L  +E   +  E +    ++ T +  F   L+  AS +E    I +LI E  +A 
Sbjct: 1050 -----LSPRE---IVMERDTLAAEVQTALDAFAAGLQPQASVEEALSRIEALIPEEVAAY 1101

Query: 646  AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGD-KLATVVEVPGDDDTV 698
                + +    D      + ++  P  G+ VHVK  GD   A VV V GD  TV
Sbjct: 1102 RG--QGYSGGGDEEDMYDDRATLRP--GDPVHVKPYGDMGSAKVVSVKGDYVTV 1151


>gi|147678274|ref|YP_001212489.1| mismatch repair ATPase [Pelotomaculum thermopropionicum SI]
 gi|238686642|sp|A5D0W6.1|MUTS2_PELTS RecName: Full=MutS2 protein
 gi|146274371|dbj|BAF60120.1| mismatch repair ATPase [Pelotomaculum thermopropionicum SI]
          Length = 785

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 228/713 (31%), Positives = 357/713 (50%), Gaps = 79/713 (11%)

Query: 25  NQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT 83
            +TS    +++ +P  +    +DI   L  A  G +L P E+ AV  TL A   + K   
Sbjct: 48  EETSEGRKLLRLEPFAEAGGWKDIRAQLRKAGQGAILDPEELLAVADTLTAGRTIRKFFQ 107

Query: 84  EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR---- 139
                  D  ++Y  L E+      L ELE KI   I      + D AS +L  IR    
Sbjct: 108 -------DRQEQYPLLYEVSSALVSLPELERKIKNAI-LPGGEVADGASPELAQIRRRLA 159

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
           A + +  E+L+ +++  + Q +    + +P++T R  R  V +K  H+  +P GI  + S
Sbjct: 160 AAQAQVKEHLEHIIRSPSYQKY----LQEPIVTIREGRYVVPVKIEHRSQVP-GIVHDQS 214

Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
           +SGAT F+EP   VE NN   RL  +E  E   IL+ L+A +A+    I   ++ + E+D
Sbjct: 215 ASGATLFIEPMAVVEKNNELRRLMAAEKREIQRILAELSAGVAQHAGPIGASLEALGELD 274

Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
              ARA ++Q +D   P+L        ++ ++I   +HPLL G                 
Sbjct: 275 FIMARARYSQKLDAWAPLLEG------EACMDIRRGRHPLLQGEV--------------- 313

Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
                                VPIDI++  +   +VITGPNTGGKT ++KT GL  LM++
Sbjct: 314 ---------------------VPIDIRLGADFDTLVITGPNTGGKTVALKTAGLLVLMAQ 352

Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
           +GL++PA    RL  F  + ADIGD QS+EQ+LSTFS H++ IV+I+     +SLVL+DE
Sbjct: 353 SGLHIPAGEGSRLGIFRQVFADIGDEQSIEQSLSTFSSHMNNIVEIIGKAGPDSLVLLDE 412

Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
           +G+GTDP+EG ALA SIL+ L       V TTHY +L        R ENA+ EF   TLR
Sbjct: 413 LGAGTDPAEGAALAQSILEKLHSAGAKTVATTHYGELKDFALTRERVENASVEFDAITLR 472

Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEE 557
           PTYR+L G  G SNA  IA  +G   ++++RA+  +  E ++ E       EL +SL + 
Sbjct: 473 PTYRLLIGKPGRSNAFEIAARLGLPEEVVKRARSFLTAEHIQAE-------ELMRSLEKT 525

Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
           +++ E++ R AA L +E   L    E    DL  +   + +K  ++ Q  +  A+++ + 
Sbjct: 526 QQEAEAERRRAAELASEARALKERYEKIEADLASKRESILSKAAEEAQALVRAARLEAEA 585

Query: 618 VVQDFENQLRDASADEINSLIKESESAIAAIVE-AHRPDDDFSVSETNTSSFTPQFGEQV 676
            V++   ++ + +A E  + I+E+   +  + +   R   + +V     +   P  GE+V
Sbjct: 586 AVRELREKMAEEAARERENAIREAREKLRKLQQRVGRAVPEKTVPGEAPAGLRP--GEEV 643

Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA 729
            +     K   V+E PG    VLVQ G +++ V      P+   +R   A PA
Sbjct: 644 FLTRYNQK-GYVLEPPGAGGEVLVQVGVIKMNV------PLRELRRVKEARPA 689


>gi|220931412|ref|YP_002508320.1| MutS2 family protein [Halothermothrix orenii H 168]
 gi|254766598|sp|B8D298.1|MUTS2_HALOH RecName: Full=MutS2 protein
 gi|219992722|gb|ACL69325.1| MutS2 family protein [Halothermothrix orenii H 168]
          Length = 791

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 232/696 (33%), Positives = 336/696 (48%), Gaps = 116/696 (16%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQR-YSPLLEL 102
           I D+  I+  A  G +LS  E+  VR TL  V  + K   E      D LQ  YS + E 
Sbjct: 68  IRDLREIIEKADKGIVLSVKEVMDVRSTLEGVRELKKYSREIGTGIDDELQDIYSIITEK 127

Query: 103 LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ 162
                 L +LE +I  CID +   I D AS  L  IR E  R    ++  L  +      
Sbjct: 128 FDRLTPLKQLENEINRCID-EHGEIKDSASRKLRSIRREMDRIEGKINDKLNSIINNTRY 186

Query: 163 AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 222
              +   L+T R +R  V +K+S+K     GI  + S+SG TYFMEP   V+ NN    L
Sbjct: 187 QEMLQDKLVTIRGNRYVVPVKSSYKNTFS-GIVHDQSTSGLTYFMEPMAIVKLNNRLGEL 245

Query: 223 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
             +E  E   IL  L+  I +  R++   ++ V  +D+ FARA F+  ++G+ P ++ + 
Sbjct: 246 KRAEEQEIYRILKKLSENIKEHTRDLSDNLEMVSLLDVDFARARFSIEIEGIEPGINDKG 305

Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
                  INI G +HPLL                 +K                    PVP
Sbjct: 306 F------INIRGGRHPLL----------------KVK--------------------PVP 323

Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
           IDI V  E + +VITGPNTGGKT ++KT+GL  LM +AGL++PA+    +  F+ + ADI
Sbjct: 324 IDITVGNEFKTLVITGPNTGGKTVALKTVGLFVLMVQAGLHIPAEEETVISIFNGVYADI 383

Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
           GD QS+EQNLSTFS HI+RI   L      SLVL+DEIG GTDP EG AL  +IL++LR+
Sbjct: 384 GDEQSIEQNLSTFSSHINRIKRFLGKADARSLVLLDEIGVGTDPREGAALGVAILEHLRE 443

Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
           R    + TTHY+++          ENA+ EF +ETL+PTYR+L G  G SNA  IA  +G
Sbjct: 444 RGVTTIATTHYSEIKSYAYSQDGVENASVEFDMETLQPTYRLLMGIPGGSNAFEIALKLG 503

Query: 523 FDRKIIQ-----------RAQKLVERLRPERQQH---------------RKSELYQSLM- 555
               II+           + + ++  L  ER+++               +K + Y SL+ 
Sbjct: 504 LPHDIIKDGKELMSGDDIKVENIISDLNEERKKYEQLKIEIEERLEAVKKKEQKYDSLLT 563

Query: 556 ---EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA- 611
              + ++KL ++AR  A      + + ++   E+K++ RR   LK KE         FA 
Sbjct: 564 DLEKRKKKLITEAREEA------LQIIKKTRKESKEILRR---LKNKE---------FAS 605

Query: 612 KVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ 671
           +  ID V             +EIN  +KE+E  I+   +    D    V E +       
Sbjct: 606 RSDIDRV------------ENEINLNLKETEKEISE--KRQNKDGRTRVKEISC------ 645

Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
            G+QV +K  G K   V+ V  +    ++Q G M+V
Sbjct: 646 -GDQVRLKKTGQK-GEVISVDREKGEAVIQAGIMKV 679


>gi|302389949|ref|YP_003825770.1| MutS2 family protein [Thermosediminibacter oceani DSM 16646]
 gi|302200577|gb|ADL08147.1| MutS2 family protein [Thermosediminibacter oceani DSM 16646]
          Length = 790

 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 217/704 (30%), Positives = 346/704 (49%), Gaps = 98/704 (13%)

Query: 26  QTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSE---ICAVRRTLRAVNNVWKK 81
           +TS  + +++S   + L+ + DI   L  A  G +L+  E   I +V +T R V N W +
Sbjct: 49  ETSEGVTILRSGINIPLNELPDIRTSLKRATMGAVLTTGELLSIASVMKTSRLVKNTWSE 108

Query: 82  LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
                      +     +  +++  +  + LE+KI   I  +  I  D AS  L  IR E
Sbjct: 109 ---------KGIAECRIIGSIIEEIHIFSSLEDKIHKAIISENEIA-DGASPRLSAIRKE 158

Query: 142 RK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
           ++    R  E L+  +     Q F    + +P+IT R SR  + +K   +  +P G+  +
Sbjct: 159 KRILFQRAKEKLELYISSPQYQKF----LQEPIITIRNSRYVIPVKQEFRSSIP-GVIHD 213

Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
            S+SGAT ++EP   ++ NN   RL   E  E   IL   + +IA++   ++   + ++ 
Sbjct: 214 QSASGATLYLEPMPVLQINNELRRLEIEEQKEMEQILREFSEKIAENREYLEVTFEGLVR 273

Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
           +D   A+A ++  + GV P L+S+ +      INI   +HPLL G               
Sbjct: 274 LDFILAKAKYSMDIKGVEPGLNSRGY------INIRKGRHPLLRGEV------------- 314

Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
                                  VPIDI +  E  V+VITGPNTGGKT S+KT+GL +LM
Sbjct: 315 -----------------------VPIDIYLGDEFTVLVITGPNTGGKTVSLKTVGLFALM 351

Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
           ++AGL+LPA+    L  F+ + ADIGD QS+EQ+LSTFS H+  I DI++     SLVL+
Sbjct: 352 AQAGLHLPAEEGTELSVFNEVFADIGDEQSIEQSLSTFSSHMKNIKDIVDKADSRSLVLL 411

Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
           DE+G+GTDP+EG ALA +IL Y  ++    V TTHY++L        R ENA+ EF +ET
Sbjct: 412 DELGAGTDPTEGAALAMAILDYFCEKGTRVVATTHYSELKAFAYSMERMENASVEFDVET 471

Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 557
           L PTYR+  G  G SNA  IAK +G  R+II+ A+  +      R+  +  +L + L +E
Sbjct: 472 LSPTYRLTIGIPGKSNAFEIAKRLGLKREIIELARSFL-----NRENIQLEDLLKGLEQE 526

Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
           R + + +      L  + M   +E+EDE + L  R   + AK  ++ +  +     + + 
Sbjct: 527 RERAKREKEEIQELKKQYMMRLKELEDEKEKLRNREEKILAKAREKARSIIEKVNKEAEK 586

Query: 618 VVQDFEN-------QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
           +++  +        Q+RD   +E+   +K++              DD+S  E        
Sbjct: 587 ILERLKEVEAQDTRQVRDRIIEEVRRRLKKA-------------SDDYSPKEPLIKKAGA 633

Query: 671 QF-------GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
           +        G++V V+SL  +   +V V   + T  VQ G M+V
Sbjct: 634 KVVAGPINPGDKVRVESLNQE-GYIVSVDEREKTAQVQIGIMKV 676


>gi|148240433|ref|YP_001225820.1| mismatch repair ATPase [Synechococcus sp. WH 7803]
 gi|147848972|emb|CAK24523.1| Mismatch repair ATPase (MutS family) [Synechococcus sp. WH 7803]
          Length = 794

 Score =  285 bits (728), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 226/729 (31%), Positives = 362/729 (49%), Gaps = 78/729 (10%)

Query: 12  PFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
           P   SL  S  L  QT   A+L  +    L    + D+A  L     G   S  E+  V 
Sbjct: 37  PLPDSLPASLTLQAQTLEMASLDGVLDGGLSFQGVRDLAPTLLRCSKGGTASGEELLEVA 96

Query: 70  RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIIL 128
            TL A   + +++ E             P+   LL++     +LE+++ F I+ +   + 
Sbjct: 97  DTLAAARRLRRQIDEP---------ELRPVCTTLLEDVATFPDLEQRLKFAIE-EGGRVA 146

Query: 129 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
           DRAS  L+ +R +    R +  + L  ++++ AA +         +I +R  R  + +KA
Sbjct: 147 DRASPGLDGLRRQWQELRAKRRDRLQDVIRRWAAHL------QDTVIAERHGRPVLAVKA 200

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
                 P G+  + S+SG+T F+EPK  ++  N    +      EE  +L+ L+A +A+ 
Sbjct: 201 GAGGQCP-GMVHDSSASGSTVFVEPKVVIDLGNKLANVDGRIREEEQRVLAELSAAVAEQ 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              +++LM  +L++DLA AR  + QW+  V P L S    + D+   ++ ++HPLL+   
Sbjct: 260 VEGLQHLMQVLLKLDLALARGRYGQWLGAVPPRLES----AVDAPFELKTLRHPLLVWQE 315

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                   +   P    V     +                       RVV ITGPNTGGK
Sbjct: 316 -------RNEQGPSVVPVSVEVSSS---------------------LRVVAITGPNTGGK 347

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++K++GLA+LM++AGL++P    P LPW   +LADIGD QSL+Q+LSTFSGH+ RI  
Sbjct: 348 TVTLKSIGLAALMARAGLWVPCTGSPTLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGR 407

Query: 425 ILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
           ILE +      +LVL+DE+G+GTDPSEG ALAT++L+ L DR  L V TTH+ +L  LK 
Sbjct: 408 ILEAIRSGPAPALVLLDEVGAGTDPSEGTALATALLRTLADRARLTVATTHFGELKALKY 467

Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
            D RFENA+  F  +TL PTY +LWG  G SNAL IA  +G +  +I  A+ L   L P 
Sbjct: 468 SDARFENASVAFDSDTLSPTYHLLWGIPGRSNALAIATRLGLETSVIDDARAL---LSPA 524

Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
                 + + + L E+R + ++ A  AA+L A    L+ E+    +   + +A  + +  
Sbjct: 525 GDGEVNT-VIRGLEEQRMRQQAAAEDAAALLARTELLHEELLQRWEKQKQHSAERQEQGR 583

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD--DFS 659
           Q+++  +   + ++  +++    +LRD  AD         E+A  A     + +D     
Sbjct: 584 QRLETSIRAGQKEVRQLIR----RLRDDRAD--------GETARKAGQRLRKLEDRHRPE 631

Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
                   + PQ G+++ + +LG K A V++V  D   + V+ G MR  V+ + +  +  
Sbjct: 632 PERRRHQGWRPQVGDRIRLLALG-KAAEVLKVSADGLQLQVRCGVMRSTVELSGVESLDG 690

Query: 720 SKRKNAANP 728
            K    A P
Sbjct: 691 RKPDPPAAP 699


>gi|338814182|ref|ZP_08626216.1| MutS2 family protein [Acetonema longum DSM 6540]
 gi|337273787|gb|EGO62390.1| MutS2 family protein [Acetonema longum DSM 6540]
          Length = 786

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 230/709 (32%), Positives = 351/709 (49%), Gaps = 77/709 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           +EE Q  L++T  AL ++ S P + L  I DI   +  A  G +L   E+ AV   L A+
Sbjct: 40  MEEVQFRLSETREALGILCSVPNVPLGGIRDIREGIKRAAIGGILDTGELMAVGGVLYAI 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
             +     +  +L G  L  YS  +  ++N      LE+ I   I  +  I  D AS +L
Sbjct: 100 RRMKSFFQDIPDL-GPILTDYSGGITPVRN------LEQAIENAISEQGQI-RDDASPEL 151

Query: 136 ELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
             +R E    R+R  E +DS+L     Q +        L+T R  R C+ +K  H++  P
Sbjct: 152 SRLRREIRTTRQRIREKVDSILHSSEYQKY----FQDVLVTVRGDRYCIPVKQEHRHQFP 207

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
            GI  + S+SGAT F+EP   V+ NN   +   +E  E   IL+LL+ ++AKS   +   
Sbjct: 208 -GIIHDQSASGATVFIEPMAVVQLNNDLKQAMAAEKNEIERILTLLSLQVAKSASLLTQS 266

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
            + +  ID AFA+A  A  +    P+ +    V    +      +HPL+           
Sbjct: 267 CETMAHIDFAFAKARLALDLKAHEPLFNQTGQVELRQA------RHPLI----------- 309

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
                P                   S+  VPID+++  +  ++VITGPNTGGKT ++KT+
Sbjct: 310 -----P-------------------SEDVVPIDVRIGNDFHILVITGPNTGGKTVALKTV 345

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
           G+ +LM++AGL++PA N  +L  F  I ADIGD QS+EQ+LSTFS H++ +V IL  V+ 
Sbjct: 346 GIFALMAQAGLFIPAANECQLTVFHNIFADIGDEQSIEQSLSTFSAHMTNLVRILNQVTG 405

Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
           + LVL+DEIG GTDP EG ALA +IL+YL       + TTHY++L       +  ENA  
Sbjct: 406 KDLVLLDEIGIGTDPDEGAALAMAILEYLHSIGARTIATTHYSELKTFAYSRSGIENACV 465

Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
           EF  +TLRPTYR+L G  G SNA  I+K +G   KII RA++L+++       H + E  
Sbjct: 466 EFDQQTLRPTYRLLIGVPGSSNAFQISKRLGLPVKIIDRARQLLDK------GHVEMESV 519

Query: 552 QSLMEERRKLESQARTAASLHA---EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
            S +EE +   S  R  A++     +I +L +++E E + L  + A    K   +    L
Sbjct: 520 LSSLEEEKT--SYIRRNAAIEQQERQITELRKKLELEQETLTEKKAETINKAKNEAAGIL 577

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDF-SVSETNTS 666
             A+   + V+++ + Q +     E    I  +   +   + +AH  +D   S+   +  
Sbjct: 578 RQARRDAEEVIKELKEQFQVKDGQERQYAIHAARKRLRDNLSQAHHLEDQRESLPTVSAE 637

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
              P  G +V V +L     TV+ V  D     VQ G M+V V   + R
Sbjct: 638 DLRP--GMKVWVVTLRQN-GTVISV--DSGEATVQLGIMKVNVALKDCR 681


>gi|159902779|ref|YP_001550123.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
           marinus str. MIT 9211]
 gi|159887955|gb|ABX08169.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
           marinus str. MIT 9211]
          Length = 805

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 220/694 (31%), Positives = 357/694 (51%), Gaps = 78/694 (11%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQR-YS 97
           +    + ++ G++     G + S  E+ ++  TLRAV  + KK+ E      D + R Y+
Sbjct: 79  ISFQGVNELDGVILHCSKGGIASGEELLSIAETLRAVRRL-KKIFE------DPVSRPYT 131

Query: 98  PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
               L  +     ELE+ + F I+ +   + DRAS  L  +R    R++++L    + + 
Sbjct: 132 T--SLFIDLATHHELEKVLLFGIE-EGGRVADRASNQLSQLR----RHLQDLRIGRRSIL 184

Query: 158 AQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             + +  G  +   +I +R  R  + +K      +P G+  + SSSG T F+EP+  +  
Sbjct: 185 QDLIRRNGSILQDTVIAERYGRPVIAMKVGSVDQVP-GVVHDSSSSGNTIFLEPQIVISL 243

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
            N  V +      EE  +LS+ +  +AK+   + +L   +L+++L  ARA +  W+ GV 
Sbjct: 244 GNQIVEIQTKISKEEERLLSIWSQLVAKNINSLNHLSSVLLQLELGLARARYGDWLGGVL 303

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P+++++     D    I+   HPLLL    ++         P+  DV          SKG
Sbjct: 304 PVITTKE----DDPFLIKDFSHPLLL---WKNKKLGGHKVIPITFDV----------SKG 346

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
           +               +VV ITGPNTGGKT ++K+ GLA LM++ G+ LP  + P LPW 
Sbjct: 347 L---------------KVVAITGPNTGGKTIALKSFGLAVLMARCGMLLPCSSEPTLPWC 391

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVAL 452
           + +LADIGD QSLEQNLSTFSGHI+RIV IL+++++    ++VL+DE+G+GTDP+EG A+
Sbjct: 392 NQVLADIGDEQSLEQNLSTFSGHIARIVRILDVIAQSPGPTVVLLDEVGAGTDPTEGSAI 451

Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
           A S+L+ L D   L + TTH  +L  LK  D+RFENA+  F  ET+RPTY +LWG  G S
Sbjct: 452 AISLLRALADSARLTIATTHLGELKALKYSDSRFENASVAFDSETIRPTYHLLWGIPGRS 511

Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 572
           NA+ IA  +G D +I + A+KL+    P+  Q   +++   L E+R + +  A  AA+L 
Sbjct: 512 NAVAIAIRLGLDSQITETAKKLIG---PKGLQD-VNQVILGLEEQRERQQKAAEDAAALL 567

Query: 573 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV-----VQDFENQLR 627
           A    LY E+          A   + +ET +  QE+   K+          V++   +LR
Sbjct: 568 ARTELLYEEL---------LARWEQQQETNRKWQEVGRYKLGTSIREGQREVRNLIRRLR 618

Query: 628 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 687
              AD    + +++   +  I    RP     VS  N  ++ P+ G++V + +LG K   
Sbjct: 619 AEGAD--GDIARKAGQRLKQIEFDSRP----QVSRRNDFNWRPKIGDRVRLIALG-KSGE 671

Query: 688 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           ++ +  D   + V  G  R  V  ++I  +   K
Sbjct: 672 IISISEDGCHLTVLCGIFRSTVDLSSIESLDGRK 705


>gi|269926462|ref|YP_003323085.1| MutS2 family protein [Thermobaculum terrenum ATCC BAA-798]
 gi|269790122|gb|ACZ42263.1| MutS2 family protein [Thermobaculum terrenum ATCC BAA-798]
          Length = 794

 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 223/699 (31%), Positives = 353/699 (50%), Gaps = 76/699 (10%)

Query: 26  QTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
           +T+ AL ++Q +P + +    DI  ++  A  G +L PSE+  +  T+ A N+  ++L +
Sbjct: 51  ETTEALRVLQLKPDITIGGARDIRSLVTKASLGGVLDPSELLQISDTIAAANSFSRQLGK 110

Query: 85  AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK- 143
             E D DS   +S L   L++   L++L ++I   ID +  +  D AS  L  IR++ + 
Sbjct: 111 VLE-DADS---FSLLSAQLRHIVDLSDLRKQIDAAIDDQAQV-RDSASTTLARIRSQLRS 165

Query: 144 ---RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
              R M++L+SL+   + +      + +P+IT+R  R  V ++A  ++ +P GI  +VS 
Sbjct: 166 AHDRLMQHLNSLISSSSYR----DALQEPIITQRDGRYVVPVRADARHRIP-GIVHDVSG 220

Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
           SG T F+EP   V+  N    L   E  E   IL+ L+  +A    +I   +  +  +D 
Sbjct: 221 SGQTLFVEPLATVDMGNRITELRRQESEEIERILAQLSEAVASVASDIMRTLLALARLDF 280

Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
           A A+A F+Q +    P L S  +      + +   +HPLL                    
Sbjct: 281 ALAKAKFSQHLHACEPELVSAEYEG--DKLFLPDARHPLL------------------GR 320

Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
           DV                  VPI I +  + RV+VITGPNTGGKT ++KT GL SLM+ +
Sbjct: 321 DV------------------VPITIFLGGDFRVLVITGPNTGGKTVALKTTGLLSLMALS 362

Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
           GL+LP     R+P    ILADIGD QS+EQ+LSTFS H+  I  +LE+   ++L+L+DE+
Sbjct: 363 GLHLPTSERARVPVLKYILADIGDEQSIEQSLSTFSSHVINIKKMLEVAGPDTLLLLDEL 422

Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
           G+GTDP EG A+A +I+ YL ++  L V TTHY ++           NAA EF LETL P
Sbjct: 423 GAGTDPEEGAAIAEAIIDYLLEKRALVVATTHYPEIKVYAQTTPGVTNAAVEFDLETLSP 482

Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
           TYR+  G  G S A++IA+ +G  + +I+ A+    R+ PE      S     L+E+   
Sbjct: 483 TYRLTIGLPGRSYAIDIAQRLGLPKVVIEAAKS---RVSPE------SRAANDLLEQ--- 530

Query: 561 LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE---TQQVQQELNFAKVQIDT 617
           +E++ + A    AE   + RE E+      R AA L+  E    Q +++    A  +++ 
Sbjct: 531 IEAEKKLADQRLAEAEQIRREAEELRS---RAAAELQEAERIREQALEEGYQQALRELED 587

Query: 618 VVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT--PQFGEQ 675
           V ++ +   R  SA +  S + E   A+ A+    R     +      S     PQ G+ 
Sbjct: 588 VRREIDEVRRRLSASQAASKLGEIADALRAVENVERRVRKSTRGSKRPSVIRRLPQVGDS 647

Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
           V +KS G +   V+ +   D T  VQ G +R RV  +++
Sbjct: 648 VRIKSFGTE-GKVLSI--SDSTAEVQVGSLRSRVPLSDL 683


>gi|296133368|ref|YP_003640615.1| MutS2 family protein [Thermincola potens JR]
 gi|296031946|gb|ADG82714.1| MutS2 family protein [Thermincola potens JR]
          Length = 782

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 196/605 (32%), Positives = 307/605 (50%), Gaps = 59/605 (9%)

Query: 26  QTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
           +T+ A  + + +P + L  + D  GI+  A  G +L P+E+  V   L A   + +  + 
Sbjct: 45  ETAEAAEIYRKEPDVPLGGMRDTRGIIRKANIGGILEPAELLDVAGNLVAARRLKRFFS- 103

Query: 85  AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
                 D   +Y  + +L+KN     ELEEKI   ID    +  D AS +L  IR   + 
Sbjct: 104 ------DRSHQYPIMGDLVKNLFINKELEEKISQAIDPSGAVA-DEASPELRRIRHRIRE 156

Query: 145 NMENLDSLLKKVA-AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
              N+ S ++ +  +Q +Q     +P+IT R  R  V +K  ++   P GI  + S+SGA
Sbjct: 157 TEINIKSKMEGIIRSQEYQKF-FQEPIITVRGDRYVVPVKQEYRGQFP-GIIHDQSASGA 214

Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
           T F+EP  AVE NN   +L + E  E   IL+ L+A +     E+      +  ID   A
Sbjct: 215 TLFIEPVAAVELNNELRKLYSDEEREVLRILTQLSASVKAFSEELLSDAKILGTIDFILA 274

Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
           +   A  M+   PI +       D  IN+   +HPL+ G                     
Sbjct: 275 KGKLAHRMNASKPIFNK------DGYINLRKCRHPLIKGHV------------------- 309

Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
                            VPIDI +  +  V+VITGPNTGGKT S+KT+GL + M++AGL+
Sbjct: 310 -----------------VPIDIYLGRDFHVLVITGPNTGGKTVSLKTVGLTAAMAQAGLH 352

Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
           +P +   ++P F  I  DIGD QS+EQ+LSTFSGH+  I+ IL  V+  +LVL+DE+G+G
Sbjct: 353 IPCEPGSQVPVFHDIFVDIGDEQSIEQSLSTFSGHLKNIIHILAKVNESALVLLDELGAG 412

Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
           TDP EG ALA +IL+YL  +    V TTHY++L     +    ENA+ EF  +TLRPTY+
Sbjct: 413 TDPVEGAALAMAILEYLYQKKARTVATTHYSELKVFAFERQGVENASVEFDSKTLRPTYK 472

Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES 563
           +L G  G S+A  IA  +G    ++ RA+  +       ++ + ++L + L   RRK E 
Sbjct: 473 LLIGQPGRSSAFEIALRLGLPEALVTRARSFL-----TSEEIQVADLVEELETNRRKAEE 527

Query: 564 QARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE 623
           + R A  L  E+ ++ R+   + + L+ R   L  K  ++    +  A+ + D +V++  
Sbjct: 528 ERRKAERLRRELDEMRRDYAAKLEALENRRKELVEKAREEAASIVRQARKEADELVKELR 587

Query: 624 NQLRD 628
             +++
Sbjct: 588 RYVQE 592


>gi|384135955|ref|YP_005518669.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius Tc-4-1]
 gi|339290040|gb|AEJ44150.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius Tc-4-1]
          Length = 779

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 228/733 (31%), Positives = 367/733 (50%), Gaps = 89/733 (12%)

Query: 8   KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           +A  PF    +   +L     A   + +      + IE +A ++  A  G  LS  E   
Sbjct: 35  RAMEPFPVRADAEAELARLDEAVRMLYRVGAPPFAGIESLAEVVKRAQRGGTLSADEANR 94

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           + R +  +  + + +  AAE  GD    +  L   +     L   E++I   +D    ++
Sbjct: 95  LARCIAGMRAMRQFVERAAE-GGD----FPLLASTVAPMADLRRTEQEIRQVVDEDGQVV 149

Query: 128 LDRASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
            D AS  L  +R E++R        LD LL+       QA  + +P+I  R    C+ ++
Sbjct: 150 -DHASPTLLRLRDEKRRREAEIRAALDRLLRT------QAKYLQEPVIAMRGEHYCLPVR 202

Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
             HK  +P GI  +VSSSG+T F+EP+  VE +     L   E  E   +L  L A +A+
Sbjct: 203 VEHKSQIP-GIVRDVSSSGSTVFIEPRTIVELSERVRELEVLEEREVERLLYQLAAAVAQ 261

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
              +    +D   E+D  FA+A +A+ +DG  P L+       +    + G +HP L   
Sbjct: 262 VADDFLRTLDVAAEVDFVFAKAAYARRVDGKRPRLT-------EGVWRLYGARHPKLHRD 314

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
           +                                    VPID+++    R+++ITGPNTGG
Sbjct: 315 A------------------------------------VPIDVELGDRFRLLIITGPNTGG 338

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT ++KT+GL +LM  +GL+LP K    + +   +  DIGD QS+EQNLSTFS H+ RI+
Sbjct: 339 KTVTLKTIGLLTLMGMSGLFLPTKRESDIGFCRHVFVDIGDEQSIEQNLSTFSSHMRRII 398

Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
           D+LE V+ +SLVL+DE+G+GTDP+EG ALA +IL +L       V TTHYA+L     ++
Sbjct: 399 DMLERVTPDSLVLLDELGAGTDPAEGSALAIAILDHLTSVGARVVATTHYAELKGYAFRN 458

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
              ENA+ EF +ETLRPTYR+L G  G SNAL IA+ +G  ++I++RA+  V     E  
Sbjct: 459 PAAENASMEFDVETLRPTYRLLMGVPGRSNALAIAERLGMPKEILERARSHV----AESN 514

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA-------HL 596
            H      + L+    KLE+ +R A  +  E     RE  D+A DL R+ A        +
Sbjct: 515 IH-----VEDLIG---KLEAASREAERMRDEAERALREARDQAADLARQKAAWEASKDSM 566

Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
           + +  ++ ++ +  A+ + D V+++  + LRD +A + + L++     +   +EA  P +
Sbjct: 567 REQAAREAREVIERARREADAVIREIRS-LRDRAAVKDHELVE-----LRKRLEAAEPGE 620

Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
             + +     +   + G++V V SLG K   VVEV  D    +VQ G MR++V  +++  
Sbjct: 621 KRTPARRRMRAEV-RPGQRVRVLSLGQK-GDVVEVAQDGRAAVVQLGAMRMKVDASDLEV 678

Query: 717 IPNSKRKNAANPA 729
           + ++  + AA P+
Sbjct: 679 VGDA--QPAAAPS 689


>gi|169831532|ref|YP_001717514.1| MutS2 family protein [Candidatus Desulforudis audaxviator MP104C]
 gi|169638376|gb|ACA59882.1| MutS2 family protein [Candidatus Desulforudis audaxviator MP104C]
          Length = 784

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 227/731 (31%), Positives = 357/731 (48%), Gaps = 95/731 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
            L+E ++L  +T     +++ +P  D     D+   +  A  GQ+L    +  + +TL A
Sbjct: 42  GLDEVRRLQAETDEGYNILRLEPNADFGGWHDVREPVRRAARGQVLDGGPLFQIGQTLAA 101

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
           +    K L        D   RY  L  L        ELE+++   I      + D AS  
Sbjct: 102 IRTQKKFLM-------DRRDRYPLLAGLAGTMPVFPELEKRLVESI-LPGGEVADGASAR 153

Query: 135 LELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L  +R    A R +  E L+ L++ +A Q +    + +P+IT R  R  V +K  ++  +
Sbjct: 154 LADLRRRLQAGRLQVREQLERLVRSLAQQKY----LQEPIITIREGRYVVPVKIEYRNQV 209

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
           P G+  + S+SGAT F+EP   V+ NN   RL  +E  E   IL+ L+  +A++  EI  
Sbjct: 210 P-GLVHDQSASGATLFIEPMAVVDKNNELRRLEAAEKQEILKILTELSTAVAQAADEILP 268

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            +D++   D   A+A  ++ M  V P+L   + + F  +      +HPL+ G+       
Sbjct: 269 AVDQLGHFDFVLAKARLSRQMAAVPPLLEDGAFLEFSRA------RHPLIRGNV------ 316

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                                         VPID +V  +  ++V+TGPNTGGKT ++KT
Sbjct: 317 ------------------------------VPIDGRVGRDFDLLVLTGPNTGGKTVALKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           +GL  LM++AGL++PA +   +  FD + ADIGD QS+E +LSTFS H++ +VDI+  V 
Sbjct: 347 IGLLVLMAQAGLHVPASSCA-VGLFDRVFADIGDEQSIENSLSTFSSHMANLVDIIGQVG 405

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVLIDE+G+GTDP+EG ALA +IL  L  R    VVTTHY +L        R ENA+
Sbjct: 406 AKSLVLIDELGTGTDPTEGAALAQAILNELHRRGTRGVVTTHYGELKEFATGRDRVENAS 465

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF L+TL PT+R++ G  G S A  IA  +G    I+ RA++    L PE++Q   +EL
Sbjct: 466 VEFDLDTLEPTFRLVTGRPGRSYAFEIALRLGMPESIVSRAREF---LAPEQRQ--TAEL 520

Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDE-AKDLDRRAAHLKAKETQQVQQELN 609
            + L E R++ E Q   A     E   L +  E E A  LD++ A L+ +  ++ Q+ + 
Sbjct: 521 LRQLEESRQEAERQREEARKEAREASILKQRYEAELASLLDKKTA-LRERAAREAQELIR 579

Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET------ 663
             + + + +V++   Q+   +  E    I+++ + I  +  A  PD   +V ET      
Sbjct: 580 QVRREGEEIVRELRRQINAGTNREKEQAIQQARARIDEL-GAGLPDP--AVPETVEGEPE 636

Query: 664 ----NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR---P 716
                 + F P+F +Q            V   P  D  V VQ G ++V +    +R   P
Sbjct: 637 RLDGGEAVFIPRFSQQ-----------GVTLGPSRDGEVQVQVGSVKVNLPLAEVRRMIP 685

Query: 717 IPNSKRKNAAN 727
            P+S   NA  
Sbjct: 686 APHSTAPNAGT 696


>gi|258512089|ref|YP_003185523.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478815|gb|ACV59134.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 776

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 222/729 (30%), Positives = 369/729 (50%), Gaps = 83/729 (11%)

Query: 9   AQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           A +PF +  +   +L     A   + +      + IE +  ++  A  G  +S  E   +
Sbjct: 33  AMVPFAERADAEAELARLDEAVRMLYRVGAPPFAGIESLEEVVQRARRGGTISADEANRL 92

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
            R +  +  + + +  AAE  GD    +  L   +     L   E++I   +D    +I 
Sbjct: 93  ARCIAGMRAMRQFVERAAE-GGD----FPLLASSVAPMADLRRTEQEIRQVVDEDGQVI- 146

Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
           D AS  L  +R E++R    + ++L ++     QA  + +P+I  R    C+ ++  HK 
Sbjct: 147 DHASPTLLRLRDEKRRREAEIRTVLDRLLRT--QAKYLQEPVIAMRGEHYCLPVRVEHKS 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G+  +VSSSG+T F+EP+  VE +     L   E  E   +L  L A +A+   + 
Sbjct: 205 QIP-GMVRDVSSSGSTVFIEPRAIVELSERVRELEVLEEREVERLLYQLAAAVAQVADDF 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
              ++   E+D  FA+A +A+ +DG  P L+       D    + G +HP L   +    
Sbjct: 264 LRNLNVAAEMDFVFAKAAYARRVDGKRPRLT-------DGVWRLHGARHPKLHRDA---- 312

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                                           VPID+++    R+++ITGPNTGGKT ++
Sbjct: 313 --------------------------------VPIDVELGDRFRLLIITGPNTGGKTVTL 340

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL +LM  +GL+LP K    + +   +  DIGD QS+EQNLSTFS H+ RI+D+LE 
Sbjct: 341 KTIGLLTLMGMSGLFLPTKRESDIGFCRHVFVDIGDEQSIEQNLSTFSSHMRRIIDMLER 400

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
           V+ +SLVL+DE+G+GTDP+EG ALA +IL +L       V TTHYA+L     ++   EN
Sbjct: 401 VTPDSLVLLDELGAGTDPAEGSALAIAILDHLTSVGARVVATTHYAELKGYAFRNPAAEN 460

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETLRPTYR+L G  G SNAL IA+ +G  ++I++RA+  V           +S
Sbjct: 461 ASMEFDVETLRPTYRLLMGVPGRSNALAIAERLGMPKEILERARSHVA----------ES 510

Query: 549 ELY-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA-------HLKAKE 600
           +++ + L+    KLE+ +R A  +  E     RE  D+A DL R+ A        ++ + 
Sbjct: 511 DIHVEDLIG---KLEAASREAERMRDEAEQALREARDQAADLARQKAAWEASKDSMREQA 567

Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 660
            ++ ++ +  A+ + D V+++  + LRD +A + + L++     +   +EA  P +  + 
Sbjct: 568 AREAREVIERARREADAVIREIRS-LRDRAAVKDHELVE-----LRKRLEAAEPGEKRAA 621

Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
                 +   + G++V V SLG K   VVEV  D    +VQ G MR++V   ++  + ++
Sbjct: 622 PRRRAQAEV-RPGQRVRVLSLGQK-GDVVEVAQDGRAAVVQLGAMRMKVDARDLEVVGDA 679

Query: 721 KRKNAANPA 729
             + AA P+
Sbjct: 680 --QPAAAPS 686


>gi|163814590|ref|ZP_02205979.1| hypothetical protein COPEUT_00741 [Coprococcus eutactus ATCC 27759]
 gi|158450225|gb|EDP27220.1| MutS2 family protein [Coprococcus eutactus ATCC 27759]
          Length = 821

 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 203/609 (33%), Positives = 301/609 (49%), Gaps = 75/609 (12%)

Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
           D AS  L+ +R  ++   E L + L K+ +   +       L+T R  R C+ +KA +K 
Sbjct: 178 DDASSGLKAVRRNKRLTNEKLHNQLAKLVSDTSKQTMFQDNLVTMRNGRYCIPVKAEYKN 237

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
             P G+  + SS+GAT F+EP   V  NN    L N E+AE   IL  L+A+ A     I
Sbjct: 238 HFP-GMIHDQSSTGATVFIEPMAIVNLNNELKELDNQELAEIEKILESLSAQTAAEIEYI 296

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           KY  D + E+D  FARA FA+   G  PI ++      D  ++I   +HPLL        
Sbjct: 297 KYDFDTLAELDFIFARASFARSYKGTEPIFNT------DGIVDIRQGRHPLL-------- 342

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                            + TV           VP+DIK+  +  ++++TGPNTGGKT S+
Sbjct: 343 ----------------EKHTV-----------VPVDIKLGEDYNLLIVTGPNTGGKTVSL 375

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KTLGL SLM ++GL++PA +  RL  FD + ADIGD QS+EQNLSTFS H+S IV IL+ 
Sbjct: 376 KTLGLFSLMGQSGLHIPALDGSRLNVFDDVFADIGDEQSIEQNLSTFSSHMSNIVYILDH 435

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
           V+  SLVL DE+G GTDP EG ALA +IL +L D     + TTHY++L          EN
Sbjct: 436 VTPGSLVLFDELGGGTDPIEGAALAIAILSHLNDMGVRCMATTHYSELKTFAMSTPGVEN 495

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF + TL+PTY+++ G  G SNA  IAK +G D  II+ A+  ++    + +     
Sbjct: 496 ASCEFDVATLQPTYKLMIGIPGKSNAFAIAKKLGIDESIIESAKANIDSDTVDFET---- 551

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
            L   L   +R++E      A L  +   L    + +  +L  + A + AK  Q+  + +
Sbjct: 552 -LIADLERSKREIEQDKADIARLKEDAKQLQERAQMKDSELSDKKAEILAKARQEASEII 610

Query: 609 NFAKVQIDTVVQDFENQLRD-ASAD-------------EINSLIKESESAIAAIVEAHRP 654
             AK + D  ++ +     + A AD             +IN L K +E     +   H+ 
Sbjct: 611 EEAKAEADAAIRKYNKWTTNPAKADAKAMEAERQKLRAKINDLGKMNEEKRKTVKSDHKA 670

Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
             DF V            G+ VHV S+ D   T+  +      + VQ G +   +   ++
Sbjct: 671 -SDFKV------------GDTVHVISM-DSEGTITALADSKGKLKVQMGIISASLPPTDL 716

Query: 715 RPIPNSKRK 723
             + + K+K
Sbjct: 717 LLVEHEKKK 725


>gi|118444471|ref|YP_877846.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium novyi NT]
 gi|229486371|sp|A0PZP4.1|MUTS2_CLONN RecName: Full=MutS2 protein
 gi|118134927|gb|ABK61971.1| DNA mismatch repair MutS2 family protein [Clostridium novyi NT]
          Length = 785

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 231/725 (31%), Positives = 359/725 (49%), Gaps = 87/725 (12%)

Query: 12  PFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
           P+  + E  + L+    A    ++      S + DI   ++ A     L PSE+  V   
Sbjct: 36  PYESAYEVREHLMETEEAFKISIKKGDAPFSGLYDIREAISKAQRRFTLFPSELLRVANL 95

Query: 72  LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           LRA +  +K   ++ +L     ++Y  L  + +    L  LEE+I  CI  +  I  DRA
Sbjct: 96  LRA-SRRFKGYVKSDDLS----EKYEVLESITEGLVPLNGLEEEISKCIIGEEEIS-DRA 149

Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKYL 189
           S  L  IR    R++++  S +K     + +  +  + + + T R  R  + +K  HK  
Sbjct: 150 STTLFNIR----RSLKDKTSSIKARVNSLIRTYSSHLQENIYTVRGERYVLPVKVEHKGA 205

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
           +P G+  + S+SGAT F+EP   V+ NN    L   E AE   IL+ L+ ++ ++   IK
Sbjct: 206 VP-GLVHDQSASGATLFIEPMSLVDLNNEIKELRLKEKAEIDRILAFLSGKVYENVDVIK 264

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
              D + E+D  FA+A +AQ +  + PI+S   H       NI   KHPL+         
Sbjct: 265 VDADILWELDFIFAKAKYAQKLGAIMPIISEDGH------FNIINAKHPLI--------- 309

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                 +P K  VEN+      L  GI+                VVITGPNTGGKT ++K
Sbjct: 310 ------DP-KKVVENNIY----LRDGITS---------------VVITGPNTGGKTVTLK 343

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+GL  +M+ +GL + A     + +F  + ADIGD QS+EQ+LSTFS H++ IV+I++  
Sbjct: 344 TVGLLHIMAMSGLMITASQGSTISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDSA 403

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
              SLVL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     K    ENA
Sbjct: 404 DENSLVLFDELGAGTDPTEGAALAVSILENLRKRKTKVIATTHYSELKAYALKVDNVENA 463

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRK 547
           + EF +ETLRPTYR+L G  G SNA  I+K +G    II+ A++ +  E L+ E      
Sbjct: 464 SVEFDVETLRPTYRLLIGVPGKSNAFEISKRLGLPDYIIEDAREGISEETLKFE------ 517

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDLDRRAAHLKAKETQQV 604
            +L QSL  +  K +  AR A S   E + L  + E   D+ +D+  +A     KE +++
Sbjct: 518 -DLIQSLQHKNIKAQEHARKAESAKEEAVKLKEKYESKLDKFQDIREKAILNAQKEAKEI 576

Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
            +E   AK + D +++D     R   + ++  L++E+   +          D    +E+ 
Sbjct: 577 IKE---AKEEADKILKDIRELERMGYSSDVRKLLEENRKKLK---------DKLEKTESK 624

Query: 665 TSSFTPQFGEQVHVKSLGDKL--------ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
            +    + GE V   S GD+L          V+  P +   V VQ G M+++V   ++R 
Sbjct: 625 LNQ-PKEVGEAVTNVSEGDELYLPKFETKVMVLTNPDNKGDVQVQAGIMKIKVNIKDLRK 683

Query: 717 IPNSK 721
              +K
Sbjct: 684 TKETK 688


>gi|334118052|ref|ZP_08492142.1| MutS2 protein [Microcoleus vaginatus FGP-2]
 gi|333460037|gb|EGK88647.1| MutS2 protein [Microcoleus vaginatus FGP-2]
          Length = 909

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 234/784 (29%), Positives = 359/784 (45%), Gaps = 109/784 (13%)

Query: 11  IPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           +P   +  ++ +LL QT  A  L       L    I+DI   L  A    LLS  E+ A+
Sbjct: 44  LPIPATQAQTAELLAQTHEAYQLESRAGGALSFEGIQDIGTSLQRAELQGLLSGEELLAI 103

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
             TL     + + +        DS      L EL        ELE++I  CID +  +  
Sbjct: 104 ATTLAGARQLRRII--------DSQADVPTLKELAAQLRTYPELEQEIHRCIDDRAQVA- 154

Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
           DRA+  L  IR + ++  + +  +L+ +  +  Q+  + + LIT+R  R  + +KA  K 
Sbjct: 155 DRATPKLAGIRVQMRQLRDRIYQILQGILQR--QSNAVQEQLITQRSGRFVIPVKAPQKD 212

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P GI  + S+SGAT ++EP   V  NN   +    E AEE A+   LT ++A  + ++
Sbjct: 213 AIP-GIVHDSSASGATLYVEPHSTVNLNNQMRQFLRQEQAEEEAVRRALTEQVAAVKPDL 271

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDG------------VCPILSSQSHVSFDSSINIEGIK 296
             L+  V  +DLA A+A ++ W+              + P    +     +   + E  +
Sbjct: 272 DRLVVVVTTLDLAAAKARYSFWLQANPPKFIELGEPELAPKNPEKEDEEKEEKEDEEKEE 331

Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV-PIDIKVECETRVVV 355
           +  LL  +LRS        +PL    +  E            FPV P+D+ +    RVV 
Sbjct: 332 NSQLLIRNLRSQITLRQLRHPLLVWQQQHE----------QGFPVVPVDLTIGPHIRVVA 381

Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
           ITGPNTGGKT ++KTLGLA+LM+KAG+++ A+    LPWFD ILADIGD QSL+Q+LSTF
Sbjct: 382 ITGPNTGGKTVTLKTLGLAALMAKAGMFVAAREPVELPWFDNILADIGDEQSLQQSLSTF 441

Query: 416 SGHISRIVDILELVSRESLVLIDE----------------------------------IG 441
           SGHI RI  ILE++  +S    +E                                  I 
Sbjct: 442 SGHIRRISRILEVLGNKSQAEGEETSNLPITNSQQQDQEVTDTQNTVSALPILKPKLQIP 501

Query: 442 SGTDPSEGVALATSILQYLRDRVG----------LAVVTTHY--------------ADLS 477
               P     LA      L D VG          LA+    Y               +L 
Sbjct: 502 KAQSPISNSQLAIPKSLVLLDEVGAGTDPSEGSALAIALLQYLAQHSLLTVATTHFGELK 561

Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
            LK +D+RFENA+ EF   +++PTYR+LWG  G SNAL IAK +G    I++ AQ  V  
Sbjct: 562 ALKYQDSRFENASVEFDDNSMQPTYRLLWGIPGRSNALTIAKRLGLLASIVEEAQTYVGG 621

Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
              +  Q     +   L  +RRK E++AR A  L  +   L+RE+  +A  L  R   LK
Sbjct: 622 ASQDVNQ-----VIAGLEAQRRKQETKAREATQLLHQTEKLHREVSQKAAALQERERELK 676

Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
             +   V + +  AK +I  +++  +      S ++     +++   +  I E H P   
Sbjct: 677 IAQEVAVNEAIGSAKSEIAQIIRRLQ------SGNQTAQNAQQATDTLNQISEKHLPSRQ 730

Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
                    SF P+ G+++ + SLG + A V+  P  ++ + V++G M++ VK   I  +
Sbjct: 731 QPAKP--KPSFMPKVGDRIRIPSLG-QTAEVLSGPDANEELSVRFGIMKMTVKLGEIESL 787

Query: 718 PNSK 721
              K
Sbjct: 788 DGQK 791


>gi|392960889|ref|ZP_10326353.1| MutS2 protein [Pelosinus fermentans DSM 17108]
 gi|421054879|ref|ZP_15517843.1| MutS2 family protein [Pelosinus fermentans B4]
 gi|421058104|ref|ZP_15520836.1| MutS2 protein [Pelosinus fermentans B3]
 gi|421063592|ref|ZP_15525555.1| MutS2 protein [Pelosinus fermentans A12]
 gi|421071758|ref|ZP_15532871.1| MutS2 protein [Pelosinus fermentans A11]
 gi|392439982|gb|EIW17670.1| MutS2 family protein [Pelosinus fermentans B4]
 gi|392446346|gb|EIW23631.1| MutS2 protein [Pelosinus fermentans A11]
 gi|392454456|gb|EIW31288.1| MutS2 protein [Pelosinus fermentans DSM 17108]
 gi|392461473|gb|EIW37661.1| MutS2 protein [Pelosinus fermentans B3]
 gi|392462624|gb|EIW38682.1| MutS2 protein [Pelosinus fermentans A12]
          Length = 787

 Score =  278 bits (711), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 224/720 (31%), Positives = 348/720 (48%), Gaps = 77/720 (10%)

Query: 11  IPFGKSLEESQKLLNQTSA--ALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           IP  K  E  +K+     A   L  M S PL    I DI  +L  A  G +L+P E+ AV
Sbjct: 35  IPSSKLAEVKEKIAETEEARGILDAMSSIPL--GGIRDIRTLLKRAEIGSVLAPDELVAV 92

Query: 69  RRTL---RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKL 124
             TL   R + N +  +  A  +    L  Y+  + +L+N  NF+  +  + G   D   
Sbjct: 93  ASTLYASRRMKNFFMDMPVALTI----LLGYAEKINVLRNIENFIENIVNEQGQIRDDAS 148

Query: 125 LIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
           + +L    E    IR  + R  + LD +L+    Q +        L+T R  R  + IK 
Sbjct: 149 VELLHVRRE----IRLSQSRIKDKLDGILRSSEYQKY----FQDALVTVRNERYVIPIKQ 200

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            ++   P GI  + S+SGAT F+EP   V  NN   +L+++E  E   IL   T +IA  
Sbjct: 201 EYRNHFP-GIIHDQSASGATVFVEPMAVVILNNEIKQLTSAEKNEIERILRSATEQIANV 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              I    D +  ID AFA+A  +  M    PI++++ +V      N+   +HPL+    
Sbjct: 260 SETIYMNCDMLANIDFAFAKAKLSLTMQATMPIINNKGYV------NLRQARHPLIE--- 310

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                                           +D  VPIDI +  +   ++ITGPNTGGK
Sbjct: 311 --------------------------------ADVVVPIDIFIGKDFNTLLITGPNTGGK 338

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KTLGL +LM++AGLY+P +N   +  F+ I ADIGD QS+EQ+LSTFS H++ +V 
Sbjct: 339 TVTLKTLGLFALMTQAGLYIPVQNGSEIAVFNNIFADIGDEQSIEQSLSTFSAHMTNLVR 398

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           IL  ++ E LVLIDEIG+GTDP EG ALA SIL++L +     + TTHY++L        
Sbjct: 399 ILNQITSEDLVLIDEIGAGTDPDEGAALAMSILEHLLNIGAKTIATTHYSELKTFAYSRQ 458

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
             ENA+ EF ++TLRPTYR+L G  G SNA  I+K +G   +II +A + +++       
Sbjct: 459 GIENASVEFDIQTLRPTYRLLIGVPGSSNAFAISKRLGLSDRIIDQASQFIDK------D 512

Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE-IEDEAKDLDRRAAHLKAKETQQ 603
           H + E   + +EE++    +         + + + RE +  E   L  +   + AK  ++
Sbjct: 513 HAEFETVLNALEEQKIAYDKLHEEVIQQEQTLHILREKLATEENVLAAKKHKILAKAQEE 572

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA---IAAIVEAHRPDDDFSV 660
            +  L   + + + ++ + + Q    S       I +                 +DD S+
Sbjct: 573 AESLLRKTRRETEEIITELKAQFTAKSNSSTRQGIFDKSRKRLRDNLENLNENEEDDNSL 632

Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
                S  TP  G QV++ +L  K  TVV +  ++  V+VQ G M++ V   + R + +S
Sbjct: 633 PIVTASVLTP--GMQVYITTLKQK-GTVVSIGINE--VIVQLGIMKMNVAITDCRLVSDS 687


>gi|291542202|emb|CBL15312.1| MutS2 family protein [Ruminococcus bromii L2-63]
          Length = 787

 Score =  278 bits (711), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 229/714 (32%), Positives = 357/714 (50%), Gaps = 86/714 (12%)

Query: 17  LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L++ ++LL QT  A+A+  +          + +G L  A +G  L+  E+ +V  TLR +
Sbjct: 39  LKKVEQLLQQTDDAVALSGRFGAPSFGGAGNCSGHLRRAQAGGCLTTGELLSVASTLRTI 98

Query: 76  NNV--WKKLTE--AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
             V  W   +   A+ LDG     +S L+    +  FL   E+KI   I  +  I  D+A
Sbjct: 99  RTVKEWHARSGGGASSLDG----YFSGLV----SNKFL---EDKITSAIISEEEI-SDKA 146

Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGIKASHK 187
           S  L  IR    R +    S  ++V  +I  +    K L    +T+R  R  V +++  +
Sbjct: 147 SPVLSDIR----RKIRTASSKAREVLDKIIHSSTYIKYLQDTIVTQRDGRYVVPVRSECR 202

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +P G+  + SSSGAT F+EP G V+ NN    L + E  E   IL  L+A        
Sbjct: 203 GNVP-GLVHDTSSSGATVFIEPMGVVQANNDIKLLQSKEEQEIERILFELSANAGDFADS 261

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           I +    +++++L FA+A  A  M    PI++ +  +    +      +HPL+       
Sbjct: 262 IIHSYKNLVQLNLIFAKADLAYSMKASKPIMNDRGMIELKQA------RHPLI------- 308

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                 + N +                      VP+D+ +  E   +VITGPNTGGKT +
Sbjct: 309 ------DKNKV----------------------VPVDVMLGKEFDTLVITGPNTGGKTVT 340

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL +LM+  GL +P  ++  L  F  +L DIGD QS+EQ+LSTFSGH++ IV I++
Sbjct: 341 LKTIGLLTLMAMCGLLVPCADNSELSVFRRVLVDIGDEQSIEQSLSTFSGHMTNIVQIIK 400

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
           L +  SL LIDE+G+GTDP EG ALA +IL+ LRD+      TTHYA+L     +    E
Sbjct: 401 LANAGSLCLIDELGAGTDPVEGAALAIAILERLRDKHAKIASTTHYAELKEFALRTPGVE 460

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           N + EF + TL+PTYR+L G  G SNA  I+K +G D +II RA +LV        ++R+
Sbjct: 461 NGSCEFDVATLKPTYRLLIGVPGKSNAFAISKRLGIDDEIISRASELVS------NENRQ 514

Query: 548 SELYQSLMEERRK-LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
            E     +E+RR+ LE Q   A  L A+     ++ E+E +   +RA     K  Q+ Q+
Sbjct: 515 FEDVVEKLEKRRQSLEKQLENANRLTAKANTEKQKAENEMQKAKQRAEREIEKARQEAQR 574

Query: 607 ELNFAKVQIDTVVQDFEN--QLRDASADEINSL---IKESESAIAAIVEAHRPDDDFSVS 661
            ++  + Q D V ++ E   + +D S      L   I + E+    +   + PD+++ + 
Sbjct: 575 IISRTRAQADAVAEELEKARKAKDMSVQARTQLKKNIDKMEAHADPVKARNTPDEEYKLP 634

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
                    + G+ V +  + DK ATV+  P  D  VLVQ G ++ RV   N+R
Sbjct: 635 R------PLKVGDTVLIYDI-DKNATVLAPPNKDGVVLVQAGIIKTRVDIKNLR 681


>gi|168187371|ref|ZP_02622006.1| DNA mismatch repair MutS2 family protein [Clostridium botulinum C
           str. Eklund]
 gi|169294704|gb|EDS76837.1| DNA mismatch repair MutS2 family protein [Clostridium botulinum C
           str. Eklund]
          Length = 785

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 230/725 (31%), Positives = 357/725 (49%), Gaps = 87/725 (12%)

Query: 12  PFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
           P+  + E  + L+    A    ++      S + DI   ++ A     L PSE+  V   
Sbjct: 36  PYESAYEVREHLMETEEAFKISIKKGDAPFSGLYDIREAISKAQRRFTLFPSELLRVANL 95

Query: 72  LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           LRA +  +K   ++ +L+    ++Y  L  + +    L  LEE+I  CI  +  I  DRA
Sbjct: 96  LRA-SRRFKGYVKSDDLN----EKYEVLESITEGLVPLNGLEEEISKCIIGEEEI-SDRA 149

Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKYL 189
           S  L  IR    R++++  S +K     + +  +  + + + T R  R  + +K  HK  
Sbjct: 150 SSTLFNIR----RSLKDKTSSIKARVNSLIRTYSSHLQENIYTVRGERYVLPVKVEHKGA 205

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
           +P G+  + SSSGAT F+EP   V+ NN    L   E AE   IL+ L+ ++ ++   IK
Sbjct: 206 VP-GLVHDQSSSGATLFIEPMSLVDLNNEIKELRLKEKAEIDRILAFLSGKVYENVDVIK 264

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
              D + E+D  FA+A +AQ +  + PI+S   H       NI   KHPL+         
Sbjct: 265 VDADILWELDFIFAKAKYAQKLGAIMPIISEDGH------FNIINAKHPLI--------- 309

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                 +P K  VEN+      L  GI+                VVITGPNTGGKT ++K
Sbjct: 310 ------DP-KKVVENNIY----LRDGITS---------------VVITGPNTGGKTVTLK 343

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+G+  +M+ +GL + A     + +F  + ADIGD QS+EQ+LSTFS H++ IV+I+E  
Sbjct: 344 TVGVLHIMAMSGLMITASQGSTISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIESA 403

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
              SLVL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     K    ENA
Sbjct: 404 DENSLVLFDELGAGTDPTEGAALAVSILENLRKRKTKVIATTHYSELKAYALKVDNVENA 463

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRK 547
           + EF +ETLRPTYR+L G  G SNA  I+K +G    II+ A++ +  E L+ E      
Sbjct: 464 SVEFDVETLRPTYRLLIGVPGKSNAFEISKRLGLPDYIIEDAREGISEETLKFE------ 517

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDLDRRAAHLKAKETQQV 604
            +L QSL  +  K +  AR A     E + L  + E   D+ +D+  +      KE +++
Sbjct: 518 -DLIQSLQHKNIKAQEHARKAEGAREEAVKLKEKYESKLDKFQDIREKGILNAQKEAKEI 576

Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
            +E   AK + D +++D     R   + ++  L++E+   +          D    +E  
Sbjct: 577 IKE---AKEEADKILKDIRELERMGYSSDVRRLLEENRKKLK---------DKLEKTEAK 624

Query: 665 TSSFTPQFGEQVHVKSLGDKL--------ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
            +    + GE V   S GD+L          V+  P +   V VQ G M+++V   ++R 
Sbjct: 625 LNK-PKEVGEAVTNVSEGDELYLPKFDTKVMVLTNPDNKGDVQVQAGIMKIKVNIKDLRK 683

Query: 717 IPNSK 721
              +K
Sbjct: 684 TKETK 688


>gi|295094560|emb|CBK83651.1| MutS2 family protein [Coprococcus sp. ART55/1]
          Length = 821

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 202/609 (33%), Positives = 303/609 (49%), Gaps = 75/609 (12%)

Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
           D AS  L+ +R  ++   E L + L K+ +   +       L+T R  R C+ +KA +K 
Sbjct: 178 DDASSGLKAVRRNKRLTNEKLHNQLAKLVSDTSKQTMFQDNLVTMRNGRYCIPVKAEYKN 237

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
             P G+  + SS+GAT F+EP   V  NN    L N E+AE   IL  L+A+ A     I
Sbjct: 238 HFP-GMIHDQSSTGATVFIEPMAIVNLNNELKELDNQELAEIEKILESLSAQTAAEIEYI 296

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           KY  D + E+D  FARA FA+   G  PI ++      D  ++I+  +HPLL        
Sbjct: 297 KYDFDTLAELDFIFARASFARSYKGTEPIFNT------DGIVDIKQGRHPLL-------- 342

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                            + TV           VP+DIK+  +  ++++TGPNTGGKT S+
Sbjct: 343 ----------------EKHTV-----------VPVDIKLGEDYNLLIVTGPNTGGKTVSL 375

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KTLGL SLM ++GL++PA +  RL  FD + ADIGD QS+EQNLSTFS H+S IV IL+ 
Sbjct: 376 KTLGLFSLMGQSGLHIPALDGSRLNVFDDVFADIGDEQSIEQNLSTFSSHMSNIVYILDH 435

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
           V+  SLVL DE+G GTDP EG ALA +IL +L +     + TTHY++L          EN
Sbjct: 436 VTPGSLVLFDELGGGTDPIEGAALAIAILSHLNNMGVRCMATTHYSELKTFAMSTPGVEN 495

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF + TL+PTY+++ G  G SNA  IAK +G D  II+ A+  ++    + +     
Sbjct: 496 ASCEFDVATLQPTYKLMIGIPGKSNAFAIAKKLGIDDSIIESAKANIDSDTVDFET---- 551

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
            L   L   +R++E      A L  +   L    + +  +L  + A + AK  Q+  + +
Sbjct: 552 -LIADLERSKREIEQDKADIARLKEDAKQLQERAQMKDSELSDKKAEILAKARQEASEII 610

Query: 609 NFAKVQIDTVVQDFENQLRD-ASAD-------------EINSLIKESESAIAAIVEAHRP 654
             AK + D  ++ +     + A AD             +IN L K +E     +   H+ 
Sbjct: 611 EEAKAEADAAIRKYNKWTTNPAKADAKAMEAERQKLRAKINDLGKMNEEKRKTVKSDHKA 670

Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
             DF V            G+ VHV S+ D   T++ +      + VQ G +   +   ++
Sbjct: 671 -SDFKV------------GDTVHVISM-DSEGTIMALADSKGKLKVQMGIISAALPPTDL 716

Query: 715 RPIPNSKRK 723
             + + K+K
Sbjct: 717 LLVEHEKKK 725


>gi|218288876|ref|ZP_03493127.1| MutS2 family protein [Alicyclobacillus acidocaldarius LAA1]
 gi|218240965|gb|EED08142.1| MutS2 family protein [Alicyclobacillus acidocaldarius LAA1]
          Length = 776

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 223/729 (30%), Positives = 366/729 (50%), Gaps = 83/729 (11%)

Query: 9   AQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           A +PF +  +   +L     A   + +      + IE +  ++  A  G  +S  E   +
Sbjct: 33  AMVPFAERADAEAELARLDEAVRMLYRVGAPPFAGIESLEEVVERARRGGTISADEANRL 92

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
            R + A     ++  E A   GD    +  L   +     L   E++I   +D    +I 
Sbjct: 93  ARCI-AGMRAMRQFVERAGEGGD----FPLLASSVAPMADLRRTEQEIRQVVDEDGQVI- 146

Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
           D AS  L  +R E++R    + S+L ++     QA  + +P+I  R    C+ ++  HK 
Sbjct: 147 DHASPTLLRLRDEKRRREGEIRSVLDRLLRT--QAKYLQEPVIAMRGEHYCLPVRVEHKS 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G+  +VSSSG+T F+EP+  VE +     L   E  E   +L  L A +A+   + 
Sbjct: 205 QIP-GMVRDVSSSGSTVFIEPRAIVELSERVRELEVLEEREVERLLYELAAAVAQVADDF 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
              ++   E+D  FA+A +A+ +DG  P L+       D    + G +HP          
Sbjct: 264 LRNLNVAAEMDFVFAKATYARRVDGKRPRLT-------DGVWRLHGARHP---------- 306

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                    L  D                   VPID+++    R+++ITGPNTGGKT ++
Sbjct: 307 --------KLDRDA------------------VPIDVELGERFRLLIITGPNTGGKTVTL 340

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL +LM  +GL+LP K    + +   +  DIGD QS+EQNLSTFS H+ RI+D+LE 
Sbjct: 341 KTIGLLTLMGMSGLFLPTKRESEIGFCRHVFVDIGDEQSIEQNLSTFSSHMRRIIDMLER 400

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
           V+ +SLVL+DE+G+GTDP+EG ALA +IL +L       V TTHYA+L     ++   EN
Sbjct: 401 VTEDSLVLLDELGAGTDPAEGSALAIAILDHLTSVGARVVATTHYAELKGYAFRNPAAEN 460

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETLRPTYR+L G  G SNAL IA+ +G  ++I++RA+  V           +S
Sbjct: 461 ASMEFDVETLRPTYRLLMGVPGRSNALAIAERLGMPKEILERARSHVA----------ES 510

Query: 549 ELY-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA-------HLKAKE 600
           +++ + L+    KLE+ +R A  +  E     RE  D+  DL R+ A        ++ + 
Sbjct: 511 DIHVEDLIG---KLEAASREAELMRDEAERALREARDKEADLARQKAAWEASKDSMREQA 567

Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 660
            ++ ++ +  A+ + D V+++  + LRD +A + + L++     +   +EA  P +  + 
Sbjct: 568 AREAREVIERARREADAVIREIRS-LRDRAAVKDHELVE-----LRKRLEAAEPGEKRAA 621

Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
                 +   + G++V V SLG K   VVEV  D    +VQ G MR++V   ++  + ++
Sbjct: 622 PRRRAQAEV-RPGQRVRVLSLGQK-GDVVEVAQDGRAAVVQLGAMRMKVDARDLEVVGDA 679

Query: 721 KRKNAANPA 729
             + AA P+
Sbjct: 680 --QPAAAPS 686


>gi|295696872|ref|YP_003590110.1| MutS2 family protein [Kyrpidia tusciae DSM 2912]
 gi|295412474|gb|ADG06966.1| MutS2 family protein [Kyrpidia tusciae DSM 2912]
          Length = 783

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 229/740 (30%), Positives = 345/740 (46%), Gaps = 90/740 (12%)

Query: 9   AQIPFGKSL----------EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSG 57
           AQ   GK+L          EE +    +T  A A  + +  + L    D+   +  A  G
Sbjct: 22  AQTDMGKTLALELLPSSDEEEVRSWCRETDEAQAWDRLAGGVSLQGATDVTESVRRAARG 81

Query: 58  QLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
            +LSP ++ A    +R    V + L +       S  R   L  L      L  LE+ I 
Sbjct: 82  GVLSPEQLYATAELMRVGRRVQRSLEQV-----QSKARTPQLQALASGIPELPALEKAIR 136

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLIT 172
             +  +   ILD AS +L  +R  RKR + +     LD L++    Q +    + +PL+T
Sbjct: 137 ESVG-EDGAILDGASSELAALR-RRKRALADRIRGALDELIRNPNTQKY----LQEPLVT 190

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
            R  R CV ++   K     GI  + S+SG T+F+EP   V   N    L   E  E   
Sbjct: 191 VRDGRYCVPVRVEFKNSF-RGIVHDQSASGQTWFIEPAAIVPLGNELRGLEAQEEREIER 249

Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
           IL  L+A + + E  +   ++ +  +D A A++  AQ MD V P      H      + +
Sbjct: 250 ILVRLSALVGQEESGLSKAVECLGRLDFALAKSRLAQQMDAVSP------HFVGGGKLRL 303

Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
              +HPL+    +                                   VP+D+ +  E  
Sbjct: 304 RRCRHPLIPKERV-----------------------------------VPVDVLIGDEYH 328

Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
            ++ITGPNTGGKT  +KT GL + M++AGL++PA     L  F+ I ADIGD QS+EQ+L
Sbjct: 329 ALIITGPNTGGKTVVLKTAGLLTCMAQAGLFIPAAEGSELSVFERIFADIGDEQSIEQSL 388

Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
           STFSGH+  I++IL+ V+  SLVL+DEIG+GTDP+EG ALA +ILQ+  DR    + TTH
Sbjct: 389 STFSGHMKHIIEILDQVNERSLVLLDEIGAGTDPAEGAALAEAILQFFVDRGIRTIATTH 448

Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
           Y DL           NA+ EF  ETLRPTYR+L G  G SNAL +A  +G  ++I+ RA 
Sbjct: 449 YGDLKAFAYTTPGVMNASVEFDPETLRPTYRLLIGVPGRSNALAVAARLGLGQEILDRA- 507

Query: 533 KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRR 592
               R R      R  ++ + L   R +   +A  A     E   L ++ E E +  +  
Sbjct: 508 ----RHRLGADDVRVEDMIRQLETARNQAREEADRARLDREEASRLRQQWESEVRRWEAE 563

Query: 593 AAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH 652
           A     + T Q ++      +Q +  V+D   +LR  S ++ +SL +   + +   ++  
Sbjct: 564 A----DQRTAQAEERARRIVLQAEREVKDVLEELRRLSREDRSSLKEHQFTELRQRLDRV 619

Query: 653 RPDDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
           +P   +     S T     TP  G+ V V S G K  TV+E+ G +   LVQ G ++ RV
Sbjct: 620 KPAFRYGRRVPSSTGEDFGTPGPGDAVEVVSFGQK-GTVLEIQGKE--ALVQIGALKTRV 676

Query: 710 KKNNIRPIPNSKRKNAANPA 729
                 P+   +++ A  PA
Sbjct: 677 ------PVAALRKQKAPAPA 690


>gi|429736042|ref|ZP_19269961.1| MutS2 family protein [Selenomonas sp. oral taxon 138 str. F0429]
 gi|429156327|gb|EKX98960.1| MutS2 family protein [Selenomonas sp. oral taxon 138 str. F0429]
          Length = 785

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 228/730 (31%), Positives = 348/730 (47%), Gaps = 99/730 (13%)

Query: 22  KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           +L  +T+ A+ + Q Q      I D+  IL  A    +L   E+ ++  T+  + NV   
Sbjct: 45  RLHAETAEAVQIQQMQSPPFGGIYDLRAILKKATMSSVLELDELRSIMSTMGGMRNVKYF 104

Query: 82  LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
                    D +Q  S L ++ +    L  LE  +   ID +     D AS +L  I  E
Sbjct: 105 FR-------DLVQDVSLLKDMARPIEILGTLERHLKDTID-EHGNFRDDASPELRRITRE 156

Query: 142 ----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
               + R  + L ++L   A Q +      + ++T R  R  + +K  ++   P G+  +
Sbjct: 157 LHTAQARVKDRLSAILHDAANQKY----FQEAIVTVRDERYVIPVKQEYRNYFP-GVIHD 211

Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
            SSSGAT F+EP   VE NN   ++  +   E   IL  L+ EIA+S   +    + + E
Sbjct: 212 QSSSGATLFVEPLATVELNNTVRQMGLAREQEIQRILQKLSGEIAQSAAILAENCEILAE 271

Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
           IDL FARAG A+ M+   P L+       D  + ++  +HPLL                 
Sbjct: 272 IDLIFARAGLAREMEAYQPTLNR------DGVVRLKRARHPLL----------------- 308

Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
                          SK   D  VPIDI++     +++ITGPNTGGKT SMKTLGL +L+
Sbjct: 309 ---------------SK---DKVVPIDIELGKNFSILLITGPNTGGKTVSMKTLGLLALL 350

Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
           +++G +LP      LP +  I ADIGD QS+EQ+LSTFS H   IV I++   +  L+L+
Sbjct: 351 AQSGCFLPTAPDSELPVYPNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDKAQQGDLILL 410

Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
           DE+G+GTDP EG ALA SI+++   R    + TTHYA L       T  ENA+ EF L+T
Sbjct: 411 DEVGAGTDPDEGAALARSIIEHFLQRDIAVLATTHYAALKTYAYTQTGVENASVEFDLKT 470

Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLME 556
           LRPTYR+L G  G SNA +I++ +G  ++I+ RA+  V       ++H   E +   L +
Sbjct: 471 LRPTYRLLIGIPGASNAFSISRQLGLPQEIVARAEIYVN------EEHTHFERVVNELEQ 524

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
           E++  E++ R       EI  +   +  E + L      L  K  ++    +  A+   +
Sbjct: 525 EKKDYEARNRVLYDKEREITAVEARLRSERETLAASRQELLHKAREEANNIVREARRSAE 584

Query: 617 TVVQDFENQLRDASADEINSLIKESESAI-AAIVEAH-----------RPDDDFSVSETN 664
             ++  ++Q  D    E    I+E+ + +  A V AH           RPDD        
Sbjct: 585 ETIKSLKDQFDDHGVKERRKAIQEARNRLDEAYVPAHTVRSTPVGKPVRPDD-------- 636

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
                 Q G+ V++ SL  +  TV+ V G +  + VQ G +R  VK +  R +   KRK 
Sbjct: 637 -----IQTGDIVYIDSLAQE-GTVLSVQGHE--LAVQVGGLRTIVKMSACRFV---KRK- 684

Query: 725 AANPAPRLRK 734
              P PR+ K
Sbjct: 685 --APKPRVEK 692


>gi|390566333|ref|ZP_10246744.1| MutS2 protein [Nitrolancetus hollandicus Lb]
 gi|390170419|emb|CCF86090.1| MutS2 protein [Nitrolancetus hollandicus Lb]
          Length = 796

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 188/565 (33%), Positives = 297/565 (52%), Gaps = 56/565 (9%)

Query: 3   HAVVQKAQIPFGKSLEESQ--KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQL 59
           ++V ++  +  G S +  Q   LL+ T  A+ ++ + P   +  + DI  +L+ AV G L
Sbjct: 24  YSVARERAVSIGPSGDPDQVAYLLSITREAVDLLNTNPGFSVGGVRDIRPVLDRAVRGAL 83

Query: 60  LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
           L P+E+  V  T++A + + +           + +R+  L E ++    L  LE  +   
Sbjct: 84  LLPTELADVLDTIQAAHTLRRGFFRTQ----TATRRHPGLAEFIEAIASLPALEADLART 139

Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
           +  +  I LD AS +L  IR + K     L   L ++ A    AG +   ++T R  R  
Sbjct: 140 VGPRGEI-LDTASAELAEIRRDLKSAHARLLDRLNRMIASGEYAGALQDAIVTMREGRYV 198

Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
           + +KA H+  +P G+    S+SG T F+EP   V+ NN    L  +E  E   IL   + 
Sbjct: 199 IPVKADHRGQVP-GVVHGTSASGVTLFIEPMNVVDLNNRWRELQMAEEHEVERILRARSD 257

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS------INIE 293
           +IA +  ++   ++ V+  DLA A+A  A  +    P L S  H + ++S      IN+ 
Sbjct: 258 QIASAAGDLGRSVEAVVAFDLALAKARLAFDLRAHEPGLVS-GHGNAETSGHARHRINLR 316

Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
             +HPLL  +++                                   VPID+++    RV
Sbjct: 317 QARHPLLDPATV-----------------------------------VPIDVRLGETYRV 341

Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
           +VITGPNTGGKT ++KT+GL ++M+++GL++PA +   L  F  I AD+GD QS+EQ+LS
Sbjct: 342 LVITGPNTGGKTVALKTVGLLAMMAQSGLFIPAADGSELSVFPAIYADVGDEQSIEQSLS 401

Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
           TFS H+ R++ +L    R+SLVL+DE+G+GTDP EG ALA +I++ L +R  LA+VTTHY
Sbjct: 402 TFSSHMRRVIAMLRSADRDSLVLLDELGAGTDPQEGSALARAIIEALLERGSLAIVTTHY 461

Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
           ++L          ENA+ EF +ETL PTYR+L G  G SNAL IA+ +G    +I  A++
Sbjct: 462 SELKAFAYVTAGTENASVEFDVETLAPTYRLLTGIPGRSNALAIARRLGLPEPVIAEARR 521

Query: 534 LVERLRPERQQHRKSELYQSLMEER 558
               L PE +  R  E+   +  +R
Sbjct: 522 Y---LTPESE--RVEEMLSEIQHQR 541


>gi|292670925|ref|ZP_06604351.1| DNA mismatch repair protein MutS [Selenomonas noxia ATCC 43541]
 gi|292647546|gb|EFF65518.1| DNA mismatch repair protein MutS [Selenomonas noxia ATCC 43541]
          Length = 785

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 217/712 (30%), Positives = 349/712 (49%), Gaps = 71/712 (9%)

Query: 22  KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           +L  +T+ AL + Q QP     I D+  IL  A+ G +L   E+ +V  T+ ++ N+   
Sbjct: 45  RLHQETAEALQVQQIQPPPFGGIYDLRVILKKALMGSVLELDELRSVMSTMSSMRNMKYF 104

Query: 82  LTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
             +        L +  PLL+ + +    L  +E  +   ID +     D AS +L  I  
Sbjct: 105 FRD--------LMQDVPLLKSMARPIEVLGIVERHLKDTID-EHGNFRDDASPELRRITC 155

Query: 141 E----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
           E    + R  + L ++L     Q +      + ++T R  R  + +K  ++   P G+  
Sbjct: 156 ELQTAQTRVKDRLSAILHDAVNQKY----FQEAIVTVRDERYVIPVKQEYRNYFP-GVIH 210

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP   VE NNM  +L  +   E   IL  LTAEIAK+   +      + 
Sbjct: 211 DQSTSGATLFVEPLATVELNNMVRQLGIAREQEIQRILQKLTAEIAKNADILADNCKILA 270

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           EID  FAR G A+ M+   PIL+       D  + ++  +HPLL                
Sbjct: 271 EIDFVFARGGLAREMEAYPPILNR------DGVVRLKRARHPLLQ--------------- 309

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                                D  VPIDI++     +++ITGPNTGGKT SMKTLGL +L
Sbjct: 310 --------------------KDKVVPIDIELGSAFSILLITGPNTGGKTVSMKTLGLLAL 349

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           ++++G +LPA     LP +  I ADIGD QS+EQ+LSTFS H   IV I+E      L+L
Sbjct: 350 LAQSGCFLPAAPDSTLPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVRIIEKAEPGDLIL 409

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
           +DE+G+GTDP EG ALA SI+++ R      + TTHYA L          +NA+ EF L 
Sbjct: 410 LDEVGAGTDPDEGAALARSIIEHFRTCHISVLATTHYAVLKTYAYTQPGIQNASVEFDLN 469

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TLRPTYR+L G  G SNA +I++ +G  + I+QRA+  +     E   H   ++  +L +
Sbjct: 470 TLRPTYRLLMGIPGASNAFSISRQLGLSQDIVQRAELYIN----EEHMHF-DKVINALEQ 524

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
           +++  E +         E+  L   + + ++ + R   ++  K  ++    +  A+   +
Sbjct: 525 KKKDYEIKLDLLYKKEKEMTMLEARLREASEKIARSQKNILHKAREEANNIIRDARRTAE 584

Query: 617 TVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 675
             ++  + Q  D    E   +I+++ + +  A V+ + P ++ S+ +T   S   + G+ 
Sbjct: 585 ETIKSLKEQFDDHGVKERQKMIQDARNRLNEAYVQGYVPQNN-SIGKTVRPS-EIRNGDI 642

Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
           V+++SL  +  TV+ V   D  ++VQ G +R  +K N    I + K K   N
Sbjct: 643 VYIQSLAQE-GTVLSV--RDKELIVQVGGLRTTIKMNACTFIGHKKSKKDTN 691


>gi|238926801|ref|ZP_04658561.1| recombination and DNA strand exchange inhibitor protein MutS2
           [Selenomonas flueggei ATCC 43531]
 gi|238885333|gb|EEQ48971.1| recombination and DNA strand exchange inhibitor protein MutS2
           [Selenomonas flueggei ATCC 43531]
          Length = 785

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 230/720 (31%), Positives = 350/720 (48%), Gaps = 87/720 (12%)

Query: 22  KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT---LRAVNNV 78
           +L  +T  A+ + Q QP     I  +  IL  A  G LL   E+  V+ T   +R V   
Sbjct: 45  QLHMETEEAVRVAQIQPPPFDGIHHLREILKKAGRGILLELDELRLVKSTIGGMRDVKYF 104

Query: 79  WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
           ++ L+  AEL          L EL +    L  LE  +   ID +     D AS  L  I
Sbjct: 105 FRDLSADAEL----------LKELARRIEILGMLERNLKAAID-EYGNFRDDASPVLHRI 153

Query: 139 ----RAERKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
               R  + R  + L S+L   A Q +FQ     + ++T R  R  + +K  ++   P G
Sbjct: 154 TNELRTAQSRVKDRLSSVLHDAAYQKMFQ-----EAIVTVRDERYVIPVKQEYRSQFP-G 207

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           +  + S+SGAT F+EP   VE NN   ++  +   E   I+  LT EIA+S   +     
Sbjct: 208 VIHDQSASGATLFIEPLAIVELNNTVRQMGIAREQEILRIMQRLTGEIARSADILSANCT 267

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            + ++DL FARA  A+ M    PIL+       D  + +   +HPLL             
Sbjct: 268 ILSDLDLIFARASLAREMRAYPPILNR------DGYVYLRRARHPLL------------- 308

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
              PL                   D  VPIDI +      ++ITGPNTGGKT SMKTLG+
Sbjct: 309 ---PL-------------------DKVVPIDIALGKTFSTLLITGPNTGGKTVSMKTLGI 346

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
            +LMS++G +LPA++   +P +  I ADIGD QS+EQ+LSTFS H   IV I++  +   
Sbjct: 347 LALMSQSGCFLPAESGSEIPVYQNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDRATSGD 406

Query: 434 LVLIDEIGSGTDPSEGVALATSILQ-YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
           LVL+DE+G+GTDP EG ALA SI++ +L +R+   V TTHYADL          ENA+ E
Sbjct: 407 LVLLDEVGAGTDPDEGAALARSIIEHFLMNRIA-TVATTHYADLKTYAYTQQGVENASVE 465

Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS---- 548
           F L+TLRPTYR+L G  G SNA +I++ +G   +I+ RA++ V     E   H ++    
Sbjct: 466 FDLKTLRPTYRLLIGIPGASNAFSISRQLGLSEEIVARAEEYVS----EDHAHFETVVHD 521

Query: 549 -ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
            E  +++ EE+ +L  +  T      E +   R   +++K   +   H   +E   + +E
Sbjct: 522 LECAKTIYEEKNQLLYKKETDIGRAEERLRAERAAFEQSK---KELFHKAREEANNIVRE 578

Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
              A+   +  ++  + Q  D    E    I E+ S +        P  + S+ + +   
Sbjct: 579 ---ARRIAEETIKSLKEQFDDHGIKERQKAIHEARSRLNETYIHDMPQKNPSIGK-DIHP 634

Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
              Q G+ V++++L  +  TV+ + G++ T  VQ G +R  VK +    I + +RKN  N
Sbjct: 635 GDVQIGDTVYIRTLAQE-GTVLSLQGEELT--VQVGGLRTIVKMSACSFIGHRERKNHVN 691


>gi|422343730|ref|ZP_16424657.1| hypothetical protein HMPREF9432_00717 [Selenomonas noxia F0398]
 gi|355378146|gb|EHG25337.1| hypothetical protein HMPREF9432_00717 [Selenomonas noxia F0398]
          Length = 785

 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 217/712 (30%), Positives = 349/712 (49%), Gaps = 71/712 (9%)

Query: 22  KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           +L  +T+ AL + Q QP     I D+  IL  A+ G +L   E+ +V  T+ ++ N+   
Sbjct: 45  RLHQETAEALQVQQIQPPPFGGIYDLRVILKKALMGSVLELDELRSVMSTMSSMRNMKYF 104

Query: 82  LTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
             +        L +  PLL+ + +    L  +E  +   ID +     D AS +L  I  
Sbjct: 105 FRD--------LMQDVPLLKSMARPIEVLGIVERHLKDTID-EHGNFRDDASPELRRITC 155

Query: 141 E----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
           E    + R  + L ++L     Q +      + ++T R  R  + +K  ++   P G+  
Sbjct: 156 ELQTAQTRVKDRLSAILHDAVNQKY----FQEAIVTVRDERYVIPVKQEYRNYFP-GVIH 210

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP   VE NNM  +L  +   E   IL  LTAEIAK+   +      + 
Sbjct: 211 DQSASGATLFVEPLATVELNNMVRQLGIAREQEIQRILQKLTAEIAKNADILADNCKILA 270

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           EID  FAR G A+ M+   PIL+       D  + ++  +HPLL                
Sbjct: 271 EIDFVFARGGLAREMEAYPPILNR------DGVVRLKRARHPLLQ--------------- 309

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                                D  VPIDI++     +++ITGPNTGGKT SMKTLGL +L
Sbjct: 310 --------------------KDKVVPIDIELGSAFSILLITGPNTGGKTVSMKTLGLLAL 349

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           ++++G +LPA     LP +  I ADIGD QS+EQ+LSTFS H   IV I+E      L+L
Sbjct: 350 LAQSGCFLPAAPDSTLPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVRIIEKAEPGDLIL 409

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
           +DE+G+GTDP EG ALA SI+++ R      + TTHYA L          +NA+ EF L 
Sbjct: 410 LDEVGAGTDPDEGAALARSIIEHFRTCHISVLATTHYAVLKTYAYTQPGIQNASVEFDLN 469

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TLRPTYR+L G  G SNA +I++ +G  + I+QRA+  +     E   H   ++  +L +
Sbjct: 470 TLRPTYRLLMGIPGASNAFSISRQLGLSQDIVQRAELYIN----EEHMHF-DKVINALEQ 524

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
           +++  E +         E+  L   + + ++ + R   ++  K  ++    +  A+   +
Sbjct: 525 KKKDYEIKLDLLYKKEKEMTMLEARLREASEKIARSQKNILHKAREEANNIIRDARRTAE 584

Query: 617 TVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 675
             ++  + Q  D    E   +I+++ + +  A V+ + P ++ S+ +T   S   + G+ 
Sbjct: 585 ETIKSLKEQFDDHGVKERQKMIQDARNRLNEAYVQGYVPQNN-SIGKTVRPS-EIRNGDI 642

Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
           V+++SL  +  TV+ V   D  ++VQ G +R  +K N    I + K K   N
Sbjct: 643 VYIQSLAQE-GTVLSV--RDKELIVQVGGLRTTIKMNACTFIGHKKSKKDTN 691


>gi|350269070|ref|YP_004880378.1| MutS2 protein [Oscillibacter valericigenes Sjm18-20]
 gi|348593912|dbj|BAK97872.1| MutS2 protein [Oscillibacter valericigenes Sjm18-20]
          Length = 795

 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 228/741 (30%), Positives = 368/741 (49%), Gaps = 85/741 (11%)

Query: 18  EESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           EE  +LL+QT AA  M  ++  P   S ++ +   L+ A  G  L+  E+  +   L A 
Sbjct: 44  EEVLRLLDQTDAAREMIGLRGSP-SFSGLKPVREALDRADRGGGLNTRELLTIAGLLTAA 102

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
               ++  E    D         L   L    FL   E++I   I      I D AS +L
Sbjct: 103 ----RRTREYFNADTGEKSAIDHLFLSLHGNRFL---EDRIKSVI-LDEDTISDNASPEL 154

Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
             IR + +        +L+++ +    +  + + LIT+R  R  V +KA  K  LP G+ 
Sbjct: 155 NDIRRKMRAAQAKSRQVLQRIISSPSYSKVLQESLITQRDGRFVVPVKAEQKAALP-GLV 213

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
            +VSS+GAT F+EP G V+ NN  + L   E  E   IL+ L+A+ A    +I++  D +
Sbjct: 214 HDVSSTGATLFVEPMGVVQANNEYIELEAREKKEIERILAELSADAANHREDIQWDYDAL 273

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
           + +DL FAR   +  +DGV P       +  D +I +   +HPLL  +            
Sbjct: 274 VHLDLIFARGQLSYKLDGVRP------EIRRDGAIVLRKARHPLLDRAK----------- 316

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VPIDI++      +VITGPNTGGKT S+KTLGL +
Sbjct: 317 ------------------------AVPIDIELGDSFDTLVITGPNTGGKTVSLKTLGLLT 352

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM++ GL++PA +  ++  ++ +LAD+GD QS+EQ+LSTFS H++ IV IL+   + +LV
Sbjct: 353 LMAQCGLHIPAASGSQISVYERVLADVGDEQSIEQSLSTFSAHMTSIVRILQETDQRTLV 412

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DE+G+GTDP EG ALA +I+Q +R        TTHYA+L          ENA+ EF +
Sbjct: 413 LFDELGAGTDPVEGAALAIAIIQQVRRFGAKLAATTHYAELKTFAMTTAGVENASCEFDV 472

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ--RAQKLVERLRPERQQHRKSELYQS 553
           E+L+PTYR+L G  G SNA  I++ +G    +++  +AQ   + +R E       ++   
Sbjct: 473 ESLQPTYRLLIGIPGKSNAFAISRRLGLPDDVVEDAKAQMAGDSVRFE-------DVLTQ 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAK-------DLDRRAAHLKAKETQQVQQ 606
           L ++R+ LE +         E+  LY++ E++A+        ++R   + +++     ++
Sbjct: 526 LEQKRQALEKK-------QVEVDRLYQQREEDARKGREFRTQMERARDNARSRGEADARR 578

Query: 607 ELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAI-AAIVEAHRP--DDDFSVSE 662
            L  AK   D  + +  E + + A AD   +L  E+++AI   + EA       +F+   
Sbjct: 579 ILRDAKAAADQTMNELAELRRQQAKADAAQNL-NEAQAAIRRGLNEAEEKLRSREFAPEP 637

Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI--PNS 720
               S   Q G+QV +  +   LA VV V G D  + +Q G+M++ VK N +R +  P  
Sbjct: 638 IPRPSRPIQKGDQVEIPGV-KTLAEVVSV-GKDGVLQLQAGRMKMTVKANEVRLVEEPAG 695

Query: 721 KRKNAANPAPRLRKQVCTCTS 741
           ++K A +  P   +Q+    +
Sbjct: 696 RKKPAVSIRPHAAQQLLRTAA 716


>gi|421078676|ref|ZP_15539628.1| MutS2 protein [Pelosinus fermentans JBW45]
 gi|392523253|gb|EIW46427.1| MutS2 protein [Pelosinus fermentans JBW45]
          Length = 787

 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 198/595 (33%), Positives = 304/595 (51%), Gaps = 77/595 (12%)

Query: 31  LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAE 87
           L  M S PL    I DI  +L  A  G +L+P E+ AV  TL   R + N +  +     
Sbjct: 57  LDAMSSIPL--GGIRDIRTLLKRAEIGSVLAPDELVAVASTLYASRRMKNFFMDMPVTLI 114

Query: 88  LDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNM 146
           +    L  Y+  + +L+N  NF+  +  + G   D   + +L    E    IR  + R  
Sbjct: 115 I----LLGYAEKINVLRNVENFIENIVNEQGQIRDDASVELLHVRRE----IRLSQSRIK 166

Query: 147 ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYF 206
           + LD +L+    Q +        L+T R  R  + IK  ++   P GI  + S+SGAT F
Sbjct: 167 DKLDGILRSSEYQKY----FQDALVTVRNERYVIPIKQEYRNHFP-GIIHDQSASGATVF 221

Query: 207 MEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAG 266
           +EP   V  NN   +L+++E  E   IL   T +IA     I    D +  ID AFA+A 
Sbjct: 222 VEPMAVVILNNEIKQLTSAEKNEIERILRSATEQIANVSETIYMNCDMLANIDFAFAKAK 281

Query: 267 FAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSE 326
            +  M    PI++++ +V      N+   +HPL+                          
Sbjct: 282 LSLTMQASMPIINNKGYV------NLRQARHPLIE------------------------- 310

Query: 327 MTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 386
                     +D  VPIDI +  +   ++ITGPNTGGKT ++KTLGL +LM++AGLY+P 
Sbjct: 311 ----------ADVVVPIDIFIGKDFNTLLITGPNTGGKTVTLKTLGLFALMTQAGLYIPV 360

Query: 387 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDP 446
           +N   +  F+ I ADIGD QS+EQ+LSTFS H++ +V IL  +S E LVLIDEIG+GTDP
Sbjct: 361 QNGSEIAVFNNIFADIGDEQSIEQSLSTFSAHMTNLVRILNQISSEDLVLIDEIGAGTDP 420

Query: 447 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
            EG ALA SIL++L +     + TTHY++L          ENA+ EF ++TLRPTYR+L 
Sbjct: 421 DEGAALAMSILEHLLNIGAKTIATTHYSELKTFAYSRQGIENASVEFDIQTLRPTYRLLI 480

Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP---------ERQQHRKSELYQSLMEE 557
           G  G SNA  I+K +G   +II++A + +++            E Q+    +L++ ++++
Sbjct: 481 GVPGSSNAFAISKRLGLSDRIIEQASQFIDKDHAEFETVLNALEEQKIAYDKLHEEVIQQ 540

Query: 558 RRKL----ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
            + L    E  A   + L A+   +  + ++EA+ L R+      +ET+++  EL
Sbjct: 541 EQTLQILREKLATEESILAAKKHKILAKAQEEAESLLRKT----RRETEEIITEL 591


>gi|125973529|ref|YP_001037439.1| MutS2 family protein [Clostridium thermocellum ATCC 27405]
 gi|281417732|ref|ZP_06248752.1| MutS2 family protein [Clostridium thermocellum JW20]
 gi|229486373|sp|A3DE67.1|MUTS2_CLOTH RecName: Full=MutS2 protein
 gi|125713754|gb|ABN52246.1| MutS2 family protein [Clostridium thermocellum ATCC 27405]
 gi|281409134|gb|EFB39392.1| MutS2 family protein [Clostridium thermocellum JW20]
          Length = 793

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 220/715 (30%), Positives = 349/715 (48%), Gaps = 72/715 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           +E +QK  +   A +A   + P+    I DI   L     G +L+P E+      LRAV 
Sbjct: 43  VERAQKETSDAVAFIARRGTPPM--GGIHDIRDSLKRVEIGAILNPGELLKTADVLRAVR 100

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
           N+ K       +  D     S L+  L++      +E++I   I  +  I  D AS  L 
Sbjct: 101 NL-KSYASNDRIKTDEDNIVSELIGCLESNK---RIEDRIYMSILSEDEIA-DNASPTLA 155

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            IR + +   E++   L  +         I +P++T R  R  + +K  ++  +P G+  
Sbjct: 156 NIRRQIRNAQESIKDKLNDIIRSSRYQKYIQEPIVTLRGDRYVIPVKQEYRTEIP-GLIH 214

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP   VE NN    L   E AE   IL  LT EI      +K  +  + 
Sbjct: 215 DSSASGATIFIEPMAVVEANNHIRELKIKEQAEIEKILGELTGEIRGIVDSLKSNVSILG 274

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
            +D  FA+A  +   + VCP+L+ +        I I+  +HPLL                
Sbjct: 275 RLDFIFAKARLSLDYNCVCPVLNDEH------KILIKKGRHPLL---------------- 312

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                    + TV           VPID  +  +   +V+TGPNTGGKT ++KT+GL +L
Sbjct: 313 --------DKKTV-----------VPIDFWIGEDFNTLVVTGPNTGGKTVTLKTVGLFTL 353

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++AGL++PA    ++  F  + ADIGD QS+EQ+LSTFS H+  IV IL+ V  +SLVL
Sbjct: 354 MTQAGLHIPANEGTKMSIFKKVYADIGDEQSIEQSLSTFSSHMKNIVGILKDVDEDSLVL 413

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP+EG ALA SIL+YLR++    V TTHY+ L          ENA  EF++E
Sbjct: 414 FDELGAGTDPTEGAALAMSILEYLRNKGSTTVATTHYSQLKAYAVTTKFVENACCEFNVE 473

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TLRPTYR+L G  G SNA  I+K +G    II++A++ +      +   +  ++  S+ +
Sbjct: 474 TLRPTYRLLIGVPGKSNAFAISKRLGLFDDIIEKAKEFL-----TQDDIKFEDMLMSIEK 528

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
              + E++   A S   E   L +E+E++ + L      L  +   + ++ L  A+ + +
Sbjct: 529 NLNQSENEKMKAESYRLEAEKLKKELEEQKRKLAENRERLIQEARAEARKILLEARKEAE 588

Query: 617 TVV-------QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
            ++       Q+  N  R   A+E+   +K    +I   +E         ++  N     
Sbjct: 589 EIISKMRRLEQEVHNAQRQKEAEELRLKLKRKVDSIEETLE-------LPLAPKNALVKP 641

Query: 670 PQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           P+    G+ V + +L D+  TV+  P  D  V+VQ G M++ V  +N++ +   K
Sbjct: 642 PENLKPGDSVLIVNL-DQKGTVITPPDKDGEVVVQAGIMKINVHISNLKLVDEQK 695


>gi|430749370|ref|YP_007212278.1| MutS2 family protein [Thermobacillus composti KWC4]
 gi|430733335|gb|AGA57280.1| MutS2 family protein [Thermobacillus composti KWC4]
          Length = 784

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 223/709 (31%), Positives = 358/709 (50%), Gaps = 92/709 (12%)

Query: 25  NQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
           ++ SAA  +  + P     I D+   L  A  G  L+P+E+  +  T R    V + + +
Sbjct: 51  DEASAAERLKGAPPF--GGIADVRAALKRAKIGGKLNPAELLEIASTARGGRLVKRHIAQ 108

Query: 85  AAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAE 141
             E          PLL  L     LTE   LEE I  CID +  ++ D+AS +L  IR E
Sbjct: 109 IHE------DHPLPLLHGL--AGQLTEHRALEESIARCIDEQAYVV-DQASPELAAIRRE 159

Query: 142 RK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
            +    R  E L+ L++  + Q      +   +IT R  R  + +K  ++     GI  +
Sbjct: 160 LRGGEARIREKLEQLVRSPSVQKM----LQDAIITIRGDRFVIPVKQEYRGHF-GGIVHD 214

Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
            S SGAT F+EP+  V+ NN    L  +E  E   IL  LTAE A+   ++   ++ + +
Sbjct: 215 QSGSGATLFIEPESIVQMNNKLRELKMAEEREIERILLRLTAETAEHADDLAANLELLGQ 274

Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
           +D AFA++  A+ M    P ++ +  +           +HPLL   S+            
Sbjct: 275 LDFAFAKSRLAREMRASLPRMNDRGFLKLKRG------RHPLLPPESV------------ 316

Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
                                  VP+D+++      ++ITGPNTGGKT ++KT+GL SLM
Sbjct: 317 -----------------------VPLDVELGNSYTAIIITGPNTGGKTVTLKTIGLLSLM 353

Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
           + +GL++PA +  +L  FD I ADIGD QS+EQNLSTFSGH++ I+ +L  ++ +SLVL+
Sbjct: 354 AMSGLFVPADDGSQLCVFDAIYADIGDEQSIEQNLSTFSGHMTNIIRMLREMTPKSLVLL 413

Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLE 496
           DE+G+GTDP+EG ALA +IL+++  R+G  +V TTHY++L           NA+ EF ++
Sbjct: 414 DELGAGTDPAEGSALAIAILEHIH-RLGCRIVATTHYSELKAYAYNRKGIINASMEFDVQ 472

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TL PTYR+L G  G SNA  IA+ +G  R II+RA+  V          R  ++  SL E
Sbjct: 473 TLSPTYRLLVGVPGRSNAFAIAERLGLPRSIIERARGEV-----SEDDRRVEDMIASLEE 527

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
           +R+  E++ +TA SL AE+  L      E +  +++   + AK  ++ ++ +  A+ + +
Sbjct: 528 DRQSAEAERQTAESLRAEMERLKERHAAELRKFEQQRDRMLAKAQEEAREAVAKARREAE 587

Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF--------SVSETNTSSF 668
            ++ D    LR  + +E  S +KE +     ++EA R  D+         S         
Sbjct: 588 AIIAD----LRRMALEEAAS-VKEHK-----LIEARRRLDEAIPDLTPKPSAQGAARKPV 637

Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
             + G++V V SL  K   V+E    +   LVQ G ++++V  +++  I
Sbjct: 638 RVEPGDEVTVISLNQK-GVVLET--GETEALVQIGILKMKVALSDLERI 683


>gi|390456779|ref|ZP_10242307.1| MutS2 protein [Paenibacillus peoriae KCTC 3763]
          Length = 788

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 233/737 (31%), Positives = 361/737 (48%), Gaps = 93/737 (12%)

Query: 17  LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           LE  +KLL  T  A A   ++  P   + + DI   +  A  G  LSP E+  +R T++A
Sbjct: 40  LEHIKKLLKGTDEAYAADRLKGVP-SFNGVVDITPAVKRARIGGTLSPQELLGIRTTVQA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
              +   +         SL   +P+  LL     L+E   LE  I  CID    + LD A
Sbjct: 99  ARRIQVCVA--------SLHEENPVETLLFWSEQLSEQRSLENSIKGCIDENAEV-LDSA 149

Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           S +L  IR E +    R  E LDS+++    +++ Q       LIT R  R  + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           +     GI  + S SGAT F+EP+  V  NN        E  E   IL  LTA +A+   
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
            + Y +D +  +D  FA+A  A+ M    P+++ + ++           +HPL+      
Sbjct: 264 MLLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                     PL+                     VPID+++      +++TGPNTGGKT 
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KT+GL SLM+ +GL++P ++  +L  FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           + ++ +SLVL+DE+G+GTDP+EG ALA SIL+++       V TTHY++L     +    
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHMHAMGCRMVATTHYSELKAYAYERKGI 462

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
            NA+ EF + TL PTYR+L G  G SNA  IA+ +G   +I+  A+  V       +  R
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPSRILDYARGEV-----TEEDQR 517

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
              +  SL + R   E +   A  L  E+  L    + E   L+ +   +  K   + + 
Sbjct: 518 VEHMIASLEQNRLTAEQEREKAEQLRTEMEALRSRHQTELDKLESQRDRMLEKAEDEARV 577

Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE------AHRPDDDFSV 660
            ++ A+ + + ++ D    LR  + +E  S +KE +  IAA  E        R  +    
Sbjct: 578 LVDKARSEAEKIISD----LRKLAQEEGAS-VKEHK-LIAARKELDEAEPKQRKKNTVKR 631

Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
           + T T S     G++V V SL  K   VVE+ G  + V VQ G M+++V  +++  +   
Sbjct: 632 AATRTRSIMA--GDEVSVHSLNKK-GHVVELSGSKEAV-VQLGIMKMKVSLDDLELL--- 684

Query: 721 KRKNAANPAPRLRKQVC 737
             + A  PAPR++K V 
Sbjct: 685 --QPAQTPAPRVQKPVT 699


>gi|410658584|ref|YP_006910955.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. DCA]
 gi|410661571|ref|YP_006913942.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. CF]
 gi|409020939|gb|AFV02970.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. DCA]
 gi|409023927|gb|AFV05957.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. CF]
          Length = 796

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 216/732 (29%), Positives = 352/732 (48%), Gaps = 114/732 (15%)

Query: 23  LLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           LL +T     +++  PL  +    +I   L     G  L+P E+  +R TL+    +   
Sbjct: 48  LLRETDEGKILLRINPLFSVRGAREIRPYLERCDRGGTLNPEELLEIRDTLKTARRLKNT 107

Query: 82  LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIR 139
           L +  +   D       L E +       E+E+ I   I  D     I DRASE+L  +R
Sbjct: 108 LIDGGQSGKDQYSELYTLRETVDGIVPQKEIEDDISRSISEDGD---INDRASEELARLR 164

Query: 140 AER----KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
             +    +R  E+LD +L+  + Q      +   +IT R  R  V IK  +    P GI 
Sbjct: 165 KAKGISQQRIKESLDGILRNPSYQKM----LQDNVITSRGDRYVVPIKMEYSSAFP-GIV 219

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
            + S+SGAT F+EP   V+  N    ++  E  E   IL  LTA++     EI  L + +
Sbjct: 220 HDQSASGATLFIEPMAVVQLGNELREITLKENREVQKILQQLTAKVTARIPEILLLNEAL 279

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
           +++D   A+A  ++ M+   P++ ++  V         G +HPLL G             
Sbjct: 280 IKLDFILAKARLSEDMEAGSPLVMNKQEVKLI------GARHPLLTG------------- 320

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
            P+                      VPI + +  + + ++ITGPNTGGKT ++KT+GL +
Sbjct: 321 -PV----------------------VPISVGLGMDDQFLIITGPNTGGKTVTLKTIGLMA 357

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           +M ++GL++PA++  RL  F  I  DIGD QS+EQ+LSTFS H++ IVDI       SLV
Sbjct: 358 VMMQSGLHIPAESDSRLGIFTRIFVDIGDEQSVEQSLSTFSAHMTNIVDITREADSRSLV 417

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L+DE+G+GTDP EG ALA +IL  L +R    V TTHY  L          ENA+ EF+ 
Sbjct: 418 LLDELGAGTDPGEGAALAMAILAELLERGSCGVATTHYGALKTFAYNTPGVENASVEFNP 477

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
           ETL+PTYR+L G  G SNAL IA+ +G    I+++A+  +       +  ++S+L ++L 
Sbjct: 478 ETLKPTYRLLTGIPGRSNALAIAQRLGLGSSILEKARSFI-----SERDTKESDLLENLE 532

Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
           + +R++E + R+              +E+E K  + +AA LK K             +++
Sbjct: 533 DTQREIELKKRS--------------VEEEQKKAEHKAAELKKK------------NLEL 566

Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH---RPDDDFSVSET--------- 663
           +   +D   + ++ + D +     E+E  I  I EA    R + + ++ +T         
Sbjct: 567 EEKYEDIMRKAKEEAVDVVRQARLEAEGIIKEIKEAQKKERREQEAALEKTRQGLKKLSE 626

Query: 664 ----------NTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
                     N S   P   + G+ V++ +L  K   V++ P +++ VLVQ G ++V V 
Sbjct: 627 KVYETEYTGKNKSGPKPGQVEPGQTVYMPNLRQK-GQVLQKPDNNNEVLVQTGILKVSVP 685

Query: 711 KNNIRPIPNSKR 722
            + IR +  +++
Sbjct: 686 LSEIRLVDETRK 697


>gi|256003347|ref|ZP_05428338.1| MutS2 family protein [Clostridium thermocellum DSM 2360]
 gi|385778551|ref|YP_005687716.1| MutS2 family protein [Clostridium thermocellum DSM 1313]
 gi|419723621|ref|ZP_14250736.1| MutS2 protein [Clostridium thermocellum AD2]
 gi|419724554|ref|ZP_14251616.1| MutS2 protein [Clostridium thermocellum YS]
 gi|255992637|gb|EEU02728.1| MutS2 family protein [Clostridium thermocellum DSM 2360]
 gi|316940231|gb|ADU74265.1| MutS2 family protein [Clostridium thermocellum DSM 1313]
 gi|380772101|gb|EIC05959.1| MutS2 protein [Clostridium thermocellum YS]
 gi|380780303|gb|EIC09986.1| MutS2 protein [Clostridium thermocellum AD2]
          Length = 793

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 219/715 (30%), Positives = 349/715 (48%), Gaps = 72/715 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           +E +QK  +   A +A   + P+    I DI   L     G +L+P E+      LRAV 
Sbjct: 43  VERAQKETSDAVAFIARRGTPPM--GGIHDIRDSLKRVEIGAILNPGELLKTADVLRAVR 100

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
           N+ K       +  D     S L+  L++      +E++I   I  +  I  D AS  L 
Sbjct: 101 NL-KSYASNDRIKTDEDNIVSELIGCLESNK---RIEDRIYMSILSEDEIA-DNASPTLA 155

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            IR + +   E++   L  +         I +P++T R  R  + +K  ++  +P G+  
Sbjct: 156 NIRRQIRNAQESIKDKLNDIIRSSRYQKYIQEPIVTLRGDRYVIPVKQEYRTEIP-GLIH 214

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP   VE NN    L   E AE   IL  LT EI      +K  +  + 
Sbjct: 215 DSSASGATIFIEPMAVVEANNHIRELKIKEQAEIEKILGELTGEIRGIVDSLKSNVSILG 274

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
            +D  FA+A  +   + VCP+L+ +        I I+  +HPLL                
Sbjct: 275 RLDFIFAKARLSLDYNCVCPVLNDEH------KILIKKGRHPLL---------------- 312

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                    + TV           VPID  +  +   +V+TGPNTGGKT ++KT+GL +L
Sbjct: 313 --------DKKTV-----------VPIDFWIGEDFNTLVVTGPNTGGKTVTLKTVGLFTL 353

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++AGL++PA    ++  F  + ADIGD QS+EQ+LSTFS H+  IV IL+ V  +SLVL
Sbjct: 354 MTQAGLHIPANEGTKMSIFKKVYADIGDEQSIEQSLSTFSSHMKNIVGILKDVDEDSLVL 413

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP+EG ALA SIL+YLR++    V TTHY+ L          ENA  EF++E
Sbjct: 414 FDELGAGTDPTEGAALAMSILEYLRNKGSTTVATTHYSQLKAYAVTTKFVENACCEFNVE 473

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TLRPTYR+L G  G SNA  I+K +G    II++A++ +      +   +  ++  S+ +
Sbjct: 474 TLRPTYRLLIGVPGKSNAFAISKRLGLFDDIIEKAKEFL-----TQDDIKFEDMLMSIEK 528

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
              + E++   A S   E   L +E+E++ + L      L  +   + ++ L  A+ + +
Sbjct: 529 NLNQSENEKMKAESYRLEAEKLKKELEEQKRKLAENRERLIQEARAEARKILLEARKEAE 588

Query: 617 TVV-------QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
            ++       Q+  N  R   A+E+   +K    +I   +E         ++  N     
Sbjct: 589 EIISKMRRLEQEVHNAQRQKEAEELRLKLKRKVDSIEETLE-------LPLAPKNALVKP 641

Query: 670 PQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           P+    G+ V + +L D+  T++  P  D  V+VQ G M++ V  +N++ +   K
Sbjct: 642 PENLKPGDSVLIVNL-DQKGTIITPPDKDGEVVVQAGIMKINVHISNLKLVDEQK 695


>gi|334138498|ref|ZP_08511917.1| recombination and DNA strand exchange inhibitor protein
           [Paenibacillus sp. HGF7]
 gi|333604147|gb|EGL15542.1| recombination and DNA strand exchange inhibitor protein
           [Paenibacillus sp. HGF7]
          Length = 825

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 214/697 (30%), Positives = 348/697 (49%), Gaps = 92/697 (13%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           I DI   ++ A  G +L+PSE+  +  T+     + K L        +++    P+  LL
Sbjct: 107 IRDIRAAVHRARVGGMLNPSELLDIATTIYGGRRLRKFL--------ETMDEQHPVPMLL 158

Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
                L++    E++I  CID     ++D AS +L  +R+E +    R  E L+ +++  
Sbjct: 159 SWAELLSDNKDTEDRIKSCIDDNA-AVMDSASGELSRVRSELRTGEARVREKLEQMIRNP 217

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           + Q      +   L+T R  R  + +K  ++     G+  + S+SGAT F+EP+  V  N
Sbjct: 218 SVQKM----LQDALVTMRGDRYVIPVKQEYRSSF-GGMIHDQSASGATLFIEPEAVVTLN 272

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N    L   E AE   IL +LT+++A+ E ++   ++ + ++D  FA+AG A+ M    P
Sbjct: 273 NRIRELKFKEEAEVEKILRMLTSQVAEIEEDLLSDVELLAQLDFTFAKAGLAREMKATLP 332

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
            L+ +  +    +      +HPL+                PL                  
Sbjct: 333 KLNDRGFLKLKRA------RHPLI----------------PL------------------ 352

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
            D  VPID+++      +++TGPNTGGKT S+KT+GL SLM+ +GL++PA+    L  FD
Sbjct: 353 -DKVVPIDLELGGSFTTIIVTGPNTGGKTVSLKTVGLLSLMAMSGLFVPAEEGSELCVFD 411

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            I ADIGD QS+EQ+LSTFS H++ I+ IL  ++ +SLVL+DE+G+GTDP+EG ALA S+
Sbjct: 412 GIFADIGDEQSIEQSLSTFSSHMTNIIGILRDMTPKSLVLLDELGAGTDPAEGSALAISL 471

Query: 457 LQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           L+ +  R+G  ++ TTHY++L     +     NA+ EF ++TL PTYR+L G  G SNA 
Sbjct: 472 LENIH-RMGCRMIATTHYSELKAYAFERRGVINASMEFDVQTLSPTYRLLVGVPGRSNAF 530

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            IA+ +G  R II +A+  V       +  R   +  SL E R   E++  +A  +  E 
Sbjct: 531 AIAERLGLPRAIIDKARGQV-----SDEDQRVETMIASLEENRLTAEAERHSAEQIRREN 585

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
            +L   +  E   LD +   +  K  ++ Q  +  A+ + + ++ D            + 
Sbjct: 586 EELRAALSAERAKLDEQRDKVLLKAEREAQDAIAKARREAEEIIAD------------LR 633

Query: 636 SLIKESESAIA--AIVEAHRPDDDFSVSETNTSSFTPQF-------GEQVHVKSLGDKLA 686
            L KE   AI    ++ A R  D+         +  P+        G++V V SLG K  
Sbjct: 634 RLAKEEAGAIKDHKLIAARRRLDEAEPKLRKPGAKRPERSKAEVEPGDEVRVVSLGQK-G 692

Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
            VVE+    + V VQ G M+++V K ++  I  S +K
Sbjct: 693 HVVEIVNSSE-VTVQLGIMKMKVNKTDLEVIKASPQK 728


>gi|255658182|ref|ZP_05403591.1| DNA mismatch repair protein MutS [Mitsuokella multacida DSM 20544]
 gi|260849490|gb|EEX69497.1| DNA mismatch repair protein MutS [Mitsuokella multacida DSM 20544]
          Length = 794

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 228/726 (31%), Positives = 355/726 (48%), Gaps = 81/726 (11%)

Query: 17  LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
            +E  + L +T+ A+ ++++       I DI  +L  A  G +L   EI     TL A+ 
Sbjct: 40  FDEVAEWLAETTEAVTVLETAMPPFGGIFDIRPLLKKAKMGAVLDLDEIMNTMSTLAAMR 99

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
           +V K+     ELD  +L+ ++  +E+L       +LE  +   +D    +  D AS +L 
Sbjct: 100 SV-KRFFRDIELDVPTLKEWARSIEIL------GQLERLLDNTVDEHGAMRED-ASVELR 151

Query: 137 LIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
            IR E    +    E + S+L     Q F        ++T R  R  + +K  ++   P 
Sbjct: 152 RIRRELHAAQAHIKERISSILHNAEYQKF----FQDAIVTVRDERYVIPVKQEYRSRFP- 206

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           GI  + S++GAT F+EP   VE NN   +L+ +E  E   IL  LTAEI+K    ++   
Sbjct: 207 GIVHDQSATGATLFIEPMAVVELNNDVKQLTLAEQQEIQRILRHLTAEISKQSAILQENC 266

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
             +  ID AFA+A  A+ M    P LS +       +      +HP +            
Sbjct: 267 RILGAIDFAFAKAKLAKDMAANRPELSREGRTDLKQA------RHPFI------------ 308

Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
                                    D  VPIDI++  + R+++ITGPNTGGKT SMKTLG
Sbjct: 309 -----------------------AKDKVVPIDIRIGEDYRMLLITGPNTGGKTVSMKTLG 345

Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
              L++++G YLP    P +  +  I ADIGD QS+EQ+LSTFS H++ IV IL+ V  +
Sbjct: 346 TMVLLAQSGCYLPTAPDPVIAVYPNIYADIGDEQSIEQSLSTFSAHMTHIVRILQEVEED 405

Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
            LVL+DE+G+GTDP EG ALA +IL+ L       + TTHY++L          ENA  E
Sbjct: 406 DLVLLDELGAGTDPEEGAALAMAILEKLLQLRVTTIATTHYSELKTFAYSREGIENACVE 465

Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL-Y 551
           F ++TLRPTYR+L G  G SNA  I++ +G    +I RAQ+LV +    + +H  +EL  
Sbjct: 466 FDVKTLRPTYRLLIGMPGASNAFAISRRLGLSESLILRAQQLV-KADHAQFEHVINELEN 524

Query: 552 QSLMEERRK---LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
           + +M E+R    LE Q R    L A++     E+  +  +L R+A    A   ++ ++E 
Sbjct: 525 EKMMYEQRNADILERQQRV-TELEAKVARTKEELSKKKGELIRKAREQSAAMVRRTRRE- 582

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPD---DDFSVSETNT 665
                  + ++++ + Q  D         I+++ + +    E  RP            + 
Sbjct: 583 ------SEAIIKELKEQFDDQGIKRRQQAIQDARAKLNEAFEKSRPGIMAQKGVGKAVSL 636

Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR--K 723
            S  P  G+ V+VK L D+  TV+EV G + T  VQ G +  +VK +  R + ++ +  K
Sbjct: 637 KSIKP--GDIVYVKKL-DQKGTVLEVQGKELT--VQIGSLHTKVKASACRFLDHAPKEPK 691

Query: 724 NAANPA 729
            A+ PA
Sbjct: 692 GASVPA 697


>gi|427405780|ref|ZP_18895985.1| MutS2 family protein [Selenomonas sp. F0473]
 gi|425708621|gb|EKU71660.1| MutS2 family protein [Selenomonas sp. F0473]
          Length = 785

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 230/728 (31%), Positives = 348/728 (47%), Gaps = 111/728 (15%)

Query: 22  KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           +L  +T+ A+ ++Q Q      I D+  IL  A  G +L   E+  +  T++ + N+ K 
Sbjct: 45  RLHEETAEAVRVLQIQTPPFGGICDLRHILQKATLGSVLEVEELREIMSTMQGMRNI-KY 103

Query: 82  LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
               AE +   L+  +  +E+L        LE ++   ID        R    LEL R  
Sbjct: 104 FFRDAEFELPLLKEQTIRIEILGM------LERRLQNTIDEHGNF---RDDASLELRRVT 154

Query: 142 RK------RNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
           R+      R  E L ++L   A Q  FQ     +P+IT R  R  + +K  ++   P G+
Sbjct: 155 RELVSAQGRVKEKLSAILHDAAYQKCFQ-----EPIITVRDERYVIPVKQEYRNQFP-GV 208

Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
             + S+SGAT F+EP   VE NN   ++  +   E   IL  LT EIA S   +      
Sbjct: 209 IHDQSASGATLFVEPLATVELNNTVRQMEIAREHEIQRILQQLTQEIASSSDILSENCTI 268

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
           +  +D  FARAG A  MD   P+ +   +V    +      +HPLL    +         
Sbjct: 269 LAGLDFIFARAGLAHNMDAYAPVFNRSRYVRLRRA------RHPLLPKEQV--------- 313

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
                                     VPIDI++  +  V++ITGPNTGGKT SMKTLG+ 
Sbjct: 314 --------------------------VPIDIELGRDFSVLLITGPNTGGKTVSMKTLGIL 347

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
           +LM+++G +LP      LP +  I ADIGD QS+EQ+LSTFS H   IV IL+    E L
Sbjct: 348 ALMAQSGCFLPTAPGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIVRILQKAGGEDL 407

Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
           VL+DE+G+GTDP EG ALA SI++YL  +    V TTHYA L           NA+ EF 
Sbjct: 408 VLLDEVGAGTDPDEGAALARSIIEYLLHKHISVVATTHYAALKTYAYGRKGVMNASVEFD 467

Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LVERLRPERQ 543
           + TLRPTYR+L G+ G SNA +I++ +G  ++I+ RAQ+           +V  L  E++
Sbjct: 468 IATLRPTYRLLIGTPGASNAFSISRRLGLSQEIVARAQQYINEDHVRFEIIVNELEQEKR 527

Query: 544 QHRKS-------ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
           ++ K        E   S++EER  +E        +HA   DL  +  +EA ++ R A   
Sbjct: 528 EYEKKHNELRVREQKFSVLEERLHIERD----KFIHAH-RDLLHKAREEANNIVREARRN 582

Query: 597 KAKETQQVQQELNFAKV-QIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPD 655
             +  + ++++ +   V +   V+Q    QL+DA        I +S +A  ++    R +
Sbjct: 583 AEETIKTLKEQFDDHGVKERRKVIQSVREQLKDA-------YIPQSMTAGISVGTKIRAE 635

Query: 656 DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           D              Q G+ V++K+L  +  TV+ V   ++ + VQ G +R  VK N   
Sbjct: 636 D-------------IQRGDIVYIKNLARE-GTVLSV--HENELTVQVGGLRTIVKINACT 679

Query: 716 PIPNSKRK 723
            I   K+K
Sbjct: 680 FISKKKQK 687


>gi|374322955|ref|YP_005076084.1| MutS2 protein [Paenibacillus terrae HPL-003]
 gi|357201964|gb|AET59861.1| MutS2 protein [Paenibacillus terrae HPL-003]
          Length = 789

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 231/738 (31%), Positives = 358/738 (48%), Gaps = 94/738 (12%)

Query: 17  LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           LE  +KLL  T  A A   ++  P   + + DI   +  A  G  LSP E+  +R T++A
Sbjct: 40  LEHIKKLLKGTDEAYAADRLKGVP-SFNGVVDIIPAVKRARIGGTLSPQELLGIRTTVQA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
              V   +         SL   +P+  LL     L+E   LE  I  CID    + LD A
Sbjct: 99  ARRVQVYVA--------SLHEENPVETLLYWSEQLSEQRGLENSIKGCIDENAEV-LDSA 149

Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           S +L  IR E +    R  E LDS+++    +++ Q       LIT R  R  + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           +     GI  + S SGAT F+EP+  V  NN        E  E   IL  LTA +A+   
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
            + Y +D +  +D  FA+A  A+ M    P+++ + ++           +HPL+      
Sbjct: 264 MLLYDVDVLGTLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                     PL+                     VPID+++      +++TGPNTGGKT 
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KT+GL SLM+ +GL++P ++  +L  FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           + ++ +SLVL+DE+G+GTDP+EG ALA SIL+++       V TTHY++L     +    
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHMHALGCRMVATTHYSELKAYAYERKGI 462

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
            NA+ EF + TL PTYR+L G  G SNA  IA+ +G   +I+  A+  V       +  R
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPGRILDYARGEV-----TEEDQR 517

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
              +  SL + R   E +   A  L  E+ +L    ++E + L+ +   L  K   + + 
Sbjct: 518 VEHMIASLEQNRLTAEQEREKAEQLRGEMEELRTRHQNELEKLEAQRERLLEKAADEARS 577

Query: 607 ELNFAKVQIDTVVQDFEN--QLRDASADEINSL-----IKESESAIAAIVEAHRPDDDFS 659
            ++ A+ + + ++ D     Q   AS  E   +     + E+E          RP     
Sbjct: 578 LVDKARSEAEIIIADLRKLAQEEGASVKEHRLIAARKELDEAEPKQRKKSAVKRP----- 632

Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
            + T T S     G++V V SL +K   VVE+ G  + V VQ G M+++V  +++  +  
Sbjct: 633 -AATRTRSIVA--GDEVSVHSL-NKKGHVVELSGSKEAV-VQLGIMKMKVSLDDLELL-- 685

Query: 720 SKRKNAANPAPRLRKQVC 737
              + A   APR +K V 
Sbjct: 686 ---QPAQTTAPRAQKPVT 700


>gi|401565428|ref|ZP_10806266.1| MutS2 family protein [Selenomonas sp. FOBRC6]
 gi|400187177|gb|EJO21373.1| MutS2 family protein [Selenomonas sp. FOBRC6]
          Length = 785

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 229/743 (30%), Positives = 353/743 (47%), Gaps = 97/743 (13%)

Query: 8   KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           ++ IP G   +E  +L  +T+ A+ + Q Q      I D+  IL  A    +L   E+ +
Sbjct: 32  RSVIPSG-DYDEVVRLHAETAEAVQIQQMQSPPFGGIYDLRVILKKATMSSVLELDELRS 90

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           +  T+  + NV            D +Q  S L ++ +    L  LE  +   ID +    
Sbjct: 91  IMSTMGGMRNVKYFFR-------DLVQDVSLLKDMARPIEILGTLERHLRDTID-EHGNF 142

Query: 128 LDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
            D AS +L  I  E    + R  + L ++L   A Q +      + ++T R  R  + +K
Sbjct: 143 RDDASPELRRITRELHTAQARVKDRLSAILHDAANQKY----FQEAIVTVRDERYVIPVK 198

Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
             ++   P G+  + SSSGAT F+EP   VE NN+  ++  +   E   IL  L+ EIA+
Sbjct: 199 QEYRNYFP-GVIHDQSSSGATLFVEPLATVELNNIVRQMGLAREQEIQRILQKLSGEIAQ 257

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
           S   +    + + EIDL FARAG A+ M+   P L+       D  + ++  +HPLL   
Sbjct: 258 SAAILAENCEILAEIDLIFARAGLAREMEAYPPTLNR------DGIVQLKRARHPLL--- 308

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                                        SK   D  VPIDI++     +++ITGPNTGG
Sbjct: 309 -----------------------------SK---DKVVPIDIELGKNFSILLITGPNTGG 336

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT SMKTLGL +L++++G +LP      LP +  I ADIGD QS+EQ+LSTFS H   IV
Sbjct: 337 KTVSMKTLGLLALLAQSGCFLPTAPDSELPVYPNIYADIGDEQSIEQSLSTFSAHTRNIV 396

Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
            I++   +  L+L+DE+G+GTDP EG ALA SI+++   R    + TTHYA L       
Sbjct: 397 RIIDKAQQGDLILLDEVGAGTDPDEGAALARSIIEHFLQRDIAVLATTHYAALKTYAYTQ 456

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
           T  ENA+ EF L+TLRPTYR+L G  G SNA +I++ +G  ++I+ RA+  V       +
Sbjct: 457 TGVENASVEFDLKTLRPTYRLLIGIPGASNAFSISRQLGLPQEIVARAEIYVN------E 510

Query: 544 QHRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
           +H   E +   L +E++  E + R       EI  +   +  E + L      L  K  +
Sbjct: 511 EHTHFERVVNELEQEKKDYEIRNRVLYDKEREITAVEARLRSERETLAASRQELLHKARE 570

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAH--------- 652
           +    +  A+   +  ++  ++Q  D    E    I+E+ + +  A V A          
Sbjct: 571 EANNIVREARRSAEETIKSLKDQFDDHGVKERRKAIQEARNRLDEAYVPARTVRSTPVGK 630

Query: 653 --RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
             RPDD              Q G+ V++ SL  +  TV+ V G +  + VQ G +R  VK
Sbjct: 631 PMRPDD-------------IQTGDIVYIDSLAQE-GTVLSVQGHE--LAVQVGGLRTIVK 674

Query: 711 KNNIRPIPNSKRKNAANPAPRLR 733
            +  R +   KRK    P  ++R
Sbjct: 675 MSACRFV---KRKAQKPPVEKVR 694


>gi|310640954|ref|YP_003945712.1| muts2 protein [Paenibacillus polymyxa SC2]
 gi|309245904|gb|ADO55471.1| MutS2 protein [Paenibacillus polymyxa SC2]
          Length = 733

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 233/737 (31%), Positives = 362/737 (49%), Gaps = 92/737 (12%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           LE  +KLL  T  A A  + +  L  + + DI   +  A  G  LSP E+  +R T++A 
Sbjct: 40  LEHIKKLLKGTDEAYAADRLKGVLSFNGVVDITPAVKRARIGGTLSPQELLGIRTTVQAA 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRAS 132
             +   +T        SL   +P+  LL     L+E   LE  I  CID    + LD AS
Sbjct: 100 RRIQVYVT--------SLHEENPVETLLYWSEQLSEQRSLENSIKGCIDENAEV-LDSAS 150

Query: 133 EDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
            +L  IR E +    R  E LDS+++    +++ Q       LIT R  R  + +KA ++
Sbjct: 151 TELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEYR 205

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
                GI  + S SGAT F+EP+  V  NN        E  E   IL  LTA +A+    
Sbjct: 206 SYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQADM 264

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           + Y +D +  +D  FA+A  A+ M    P+++ + ++           +HPL+       
Sbjct: 265 LLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------- 311

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                    PL+                     VPID+++      +++TGPNTGGKT +
Sbjct: 312 ---------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTVT 343

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL SLM+ +GL++P ++  +L  FD I ADIGD QS+EQNLSTFS H++ I+ IL+
Sbjct: 344 LKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISILK 403

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
            ++ +SLVL+DE+G+GTDP+EG ALA SIL+++       V TTHY++L     +     
Sbjct: 404 NMTPKSLVLLDEVGAGTDPAEGSALAVSILEHIHALGCRMVATTHYSELKAYAYERKGII 463

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NA+ EF + TL PTYR+L G  G SNA  IA+ +G   +I+  A+  V       +  R 
Sbjct: 464 NASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPGRILDYARGEV-----TEEDQRV 518

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
             +  SL + R   E +   A  L  E+  L    + E   LD+    L+++  + +++ 
Sbjct: 519 EHMIASLEQNRLTAEQEREKAEQLRKEMEALRTRHQTE---LDK----LESQRDRMLEKA 571

Query: 608 LNFAKVQIDTVVQDFENQLRDAS--ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 665
            + A+V +D    + E  + D    A E  + +KE +  IAA  E    +       T  
Sbjct: 572 EDEARVLVDKARSEAEKIITDLRRLAQEEGASVKEHK-LIAARKELDEAEPKQRKKSTAK 630

Query: 666 SSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
            S T +      G++V V SL  K   VVE+ G  + + VQ G M+++V  +++  +   
Sbjct: 631 RSITTRTRSIMAGDEVSVHSLNKK-GHVVELTGSKEAI-VQLGIMKMKVSLDDLELL--- 685

Query: 721 KRKNAANPAPRLRKQVC 737
             + A   APR++K V 
Sbjct: 686 --QPAQTTAPRVQKPVT 700


>gi|121534235|ref|ZP_01666060.1| MutS2 family protein [Thermosinus carboxydivorans Nor1]
 gi|121307338|gb|EAX48255.1| MutS2 family protein [Thermosinus carboxydivorans Nor1]
          Length = 789

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 216/685 (31%), Positives = 337/685 (49%), Gaps = 75/685 (10%)

Query: 33  MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDS 92
           ++ S  +      DI  IL     G +L P E+ A+  TL A   + + LTEA       
Sbjct: 62  LLASSHVPFGGARDIRAILRRLEIGAVLEPEELLAIASTLYAARRLKQFLTEA------- 114

Query: 93  LQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNME 147
            +  S LL E       L  LE  I   +  +  I+ D AS +L  IR E    ++R  E
Sbjct: 115 -KPSSVLLTEKAGRITALRNLEAAIESTV-SEQGIVRDEASVELTRIRREIRVAQQRVKE 172

Query: 148 NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 207
            LD +L     Q +      + L+T R  R  + IK  H+Y  P GI  + S+SGAT F+
Sbjct: 173 KLDQILHSAEYQKY----FQEALVTIRGDRYVIPIKQEHRYHFP-GIVHDQSASGATVFI 227

Query: 208 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 267
           EP   V  NN   +L  +E  E   IL+ L++++A+    I+   + V  +D AFA+A  
Sbjct: 228 EPMAVVNLNNDIKQLVAAEKNEVERILAALSSQVARHVDAIRQNSEIVAALDFAFAKAKL 287

Query: 268 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 327
              M    P+L+ +  +    +      +HPL+                P          
Sbjct: 288 GLDMQANMPLLNDKGRIFLRQA------RHPLI----------------P---------- 315

Query: 328 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 387
                     D  VPID+++  +  +++ITGPNTGGKT ++KT+GL +LM++AGL++PA 
Sbjct: 316 ---------RDEVVPIDVRLGEDFSILLITGPNTGGKTVTLKTVGLFALMTQAGLFIPAG 366

Query: 388 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 447
           +   +P F  + ADIGD QS+EQ+LSTFS H++ +V IL  VS   LVLIDEIG+GTDP 
Sbjct: 367 SGSEMPVFRNVFADIGDEQSIEQSLSTFSAHMTNLVKILAKVSAHDLVLIDEIGAGTDPG 426

Query: 448 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 507
           EG ALA +IL+YL       + TTHY++L          ENA+ EF + TLRPTYR+  G
Sbjct: 427 EGAALAMAILEYLHSAGARTIATTHYSELKTFAYSRHGIENASVEFDIHTLRPTYRLQIG 486

Query: 508 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 567
             G SNA  I++ +G  +++I RA++ +++       + + E   +++E+ +K   + R 
Sbjct: 487 IPGSSNAFAISRRLGLPQELIDRARQFLDK------DYAQFEKILAVLEQEKKEYEERRR 540

Query: 568 AASLHAEIMDLYRE--IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
            A      +   R+   ++EA  L RR   +  K  ++    +  A+ Q + V+   + Q
Sbjct: 541 RAEELEAEVAALRQKLAQEEAALLARR-REIIDKAQEEAMSIVRQARRQAEEVIARLKEQ 599

Query: 626 LRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
              AS  E    I ++   +   + E H P+ D +      +  TP  G  V+V +L  K
Sbjct: 600 FSVASDKERQQAIADARRQLQRQMAELHHPELDAAEKTAPPALLTP--GSTVYVTTLRQK 657

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRV 709
             +V+ +   D   +VQ G ++V V
Sbjct: 658 -GSVLAI--KDGEAVVQLGVLKVNV 679


>gi|375307738|ref|ZP_09773025.1| MutS2 protein [Paenibacillus sp. Aloe-11]
 gi|375080069|gb|EHS58290.1| MutS2 protein [Paenibacillus sp. Aloe-11]
          Length = 788

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 231/737 (31%), Positives = 361/737 (48%), Gaps = 93/737 (12%)

Query: 17  LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           LE  +K+L  T  A A   ++  P   + + DI   +  A  G  L+P E+  +R T++A
Sbjct: 40  LEHIKKMLKGTDEAYAADRLKGVP-SFNGVVDITPAVKRARIGGTLNPQELLGIRTTVQA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
              +   +         SL   +P+  LL     L+E   LE  I  CID    + LD A
Sbjct: 99  ARRIQVYVA--------SLHEENPVETLLFWSEQLSEQRSLENSIKGCIDENAEV-LDSA 149

Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           S +L  IR E +    R  E LDS+++    +++ Q       LIT R  R  + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           +     GI  + S SGAT F+EP+  V  NN        E  E   IL  LTA +A+   
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
            + Y +D +  +D  FA+A  A+ M    P+++ + ++           +HPL+      
Sbjct: 264 MLLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                     PL+                     VPID+++      +++TGPNTGGKT 
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KT+GL SLM+ +GL++P ++  +L  FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           + ++ +SLVL+DE+G+GTDP+EG ALA SIL+++       V TTHY++L     +    
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHMHAMGCRMVATTHYSELKAYAYERKGI 462

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
            NA+ EF + TL PTYR+L G  G SNA  IA+ +G   +I+  A+  V       +  R
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPSRILDYARGEV-----TEEDQR 517

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
              +  SL + R   E +   A  L  E+  L    + E   L+ +   +  K   + + 
Sbjct: 518 VEHMIASLEQNRLTAEQEREKAEQLRREMEALRSRHQTELDKLESQRDRMLEKAEDEARV 577

Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE------AHRPDDDFSV 660
            ++ A+ + + ++ D    LR  + +E  S +KE +  IAA  E        R  +    
Sbjct: 578 LVDKARSEAEKIISD----LRKLAQEEGAS-VKEHK-LIAARKELDEAEPKQRKKNTVKR 631

Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
           + T T S     G++V V SL  K   VVE+ G  + V VQ G M+++V  +++  +   
Sbjct: 632 AATRTRSIMA--GDEVTVHSLNKK-GHVVELSGSKEAV-VQLGIMKMKVSLDDLELL--- 684

Query: 721 KRKNAANPAPRLRKQVC 737
             + A  PAPR++K V 
Sbjct: 685 --QPAQTPAPRVQKPVT 699


>gi|300856601|ref|YP_003781585.1| DNA mismatch repair MutS-like protein [Clostridium ljungdahlii DSM
           13528]
 gi|300436716|gb|ADK16483.1| DNA mismatch repair MutS related protein [Clostridium ljungdahlii
           DSM 13528]
          Length = 786

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 224/712 (31%), Positives = 361/712 (50%), Gaps = 79/712 (11%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           +L E ++ L +T  AL ++ ++   P +   + D+   +  A  G  L P +I  +   L
Sbjct: 39  NLYEVREHLQETREALKLLVTKGNPPFE--GVYDVRQGIKMAGKGSTLMPGQILKIGAIL 96

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
           RA   + K +T +     +  + +  + ++      L  LE++I   I+ +  I  D+AS
Sbjct: 97  RAARRIQKYITVS-----EDEEHFKIIEDICAGIVPLKNLEDEIFIAIESEDEI-SDKAS 150

Query: 133 EDLELIRAERK-RNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L  IR   K +N    + ++SL++  +  +         L T R  R  + +KA +K 
Sbjct: 151 SLLYNIRKSLKDKNASVRDRVNSLIRSYSDYL------QDNLYTMRGDRYVLPVKAENKS 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G+  + SSSGAT ++EP G V  NN    L   E AE   IL+ L+ +I  +   +
Sbjct: 205 SVP-GLVHDQSSSGATLYIEPMGLVNLNNEIKELKLKEKAEIDRILAELSQQIYDNITVV 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           +   D + E+D  FA+A F   ++G  P      +VS +  +NI   +HPL+        
Sbjct: 264 ERDADIIWELDFIFAKAKFGNELNGNIP------NVSENGVVNIIEGRHPLI-------- 309

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                           ++ TV           VP+D+ +      +VITGPNTGGKT ++
Sbjct: 310 ----------------NKKTV-----------VPMDVYIGRNFSCLVITGPNTGGKTVTL 342

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL  +M+ +GL +PA+ +  + +F  + ADIGD QS+EQNLSTFS H++ IV+I+E 
Sbjct: 343 KTIGLLHIMALSGLMIPARENSTVGFFTEVFADIGDEQSIEQNLSTFSSHMTNIVNIIEN 402

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
              +SLVL DE+G+GTDP+EG ALA SIL+ LR R    V TTHY++L     K+   EN
Sbjct: 403 FDEKSLVLFDELGAGTDPTEGAALAVSILENLRKRGCTIVATTHYSELKVYALKNEGVEN 462

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETLRPTYR++ G  G SNA  I+K +G    II+ A+   E +  +  Q    
Sbjct: 463 ASVEFDVETLRPTYRLMIGVPGKSNAFEISKRLGLPEFIIEDAR---ENIASDALQF--E 517

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKAKETQQVQQ 606
           +L QSL E++ K E+ AR A  L +E   +  + E++A  L   R  A + A+  ++ ++
Sbjct: 518 DLIQSLQEKKSKAETFAREAEILKSEAAKIKEKYEEKASKLQNIRDKAIIGAQ--REAKE 575

Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP---DDDFSVSET 663
            +  +K + D +++D     R      +   ++E+   +   +E       D+   V E 
Sbjct: 576 IIRNSKEEADKILKDMRELERMGYTSSVRHKLEENRKKLKDRLEKTEEKLYDNKNDVGEE 635

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
             S    + G++V + SL  K A V+  P     V VQ G M++ VK   +R
Sbjct: 636 LKSV---KEGQEVFIPSLNQK-AVVLSKPDSKGEVQVQAGIMKISVKLKELR 683


>gi|452995728|emb|CCQ92597.1| MutS2 protein [Clostridium ultunense Esp]
          Length = 792

 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 225/704 (31%), Positives = 352/704 (50%), Gaps = 58/704 (8%)

Query: 16  SLEESQKLLNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           SLEE + L  +T  AL + M++    L  I DI+  L  A  G  L+P+ +  V  +LR 
Sbjct: 39  SLEEVEYLQRETKEALELIMKNGNPPLFGIFDISHELKMAEIGGTLNPNNLLKVSDSLRV 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             ++ K + E  E   +   ++  L  L+ +   L  +E++I   I      I D AS  
Sbjct: 99  SRSLKKYMKELKE---EETIKFPILQGLISSLRALKFIEDEINNAI-INENEISDNASPT 154

Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
           L  IR +     E++ + L  + +       +   ++T R  R  V IK  +K   P G+
Sbjct: 155 LRNIRRQIINKNESIRNRLNSIISSPKYKKFLQDSIVTMREGRYVVPIKQENKAYFP-GL 213

Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
             + SSSGAT F+EP   VE NN    L   E  E   IL  L+A +A+  + I+   + 
Sbjct: 214 VHDQSSSGATLFVEPMAVVELNNELRELEIKEREEIERILKELSALVAEEAKNIRNNQNI 273

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
           +  +D  FA+   A  MDG  P+L+   +      I+I+  +HPLL              
Sbjct: 274 LQRLDFIFAKGKLALEMDGTKPLLNKSGY------IDIKQARHPLL-------------- 313

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
                   E  E+             VPIDI +      +VITGPNTGGKT ++KT+GL 
Sbjct: 314 --------EPKEV-------------VPIDIYLGKGFNTLVITGPNTGGKTVTLKTVGLL 352

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
           +LM+++G+++PA  + ++  FD I ADIGD QS+EQ+LSTFS H++ IVDIL+ V + SL
Sbjct: 353 TLMAQSGIHIPADFNSQIGVFDQIFADIGDEQSIEQSLSTFSSHMTNIVDILDKVEQNSL 412

Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
           +L DE+G+GTDP+EG ALA SIL +L       + TTHY+ L        R  NA+ EF 
Sbjct: 413 ILFDELGAGTDPTEGAALAMSILDHLLKLNIRTIATTHYSQLKIYALTTDRVRNASVEFD 472

Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
           +ETL PTYR+L G  G SNA  I+K +G    II  A+ LV +   E +     ++ Q++
Sbjct: 473 VETLSPTYRLLIGVPGKSNAFEISKRLGLQGYIIDYAKTLVSKENVEFE-----DVLQAI 527

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
            ++R+ +E     A  L +++  L  E+  E +        +  +  ++ +  L  AK +
Sbjct: 528 DKDRKIIEENRFEAERLKSDVEKLKEELTKEKEKTKAEREKIITRAKEEARSILRAAKEE 587

Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAI---VEAHRPDDDFSVSETNTSSFTPQ 671
            D +V +  +   +   D  N  I+E++  + +    VE+    D  +V          +
Sbjct: 588 SDHIVTELRHISTEIEKDR-NKKIQEAQEKLKSSLDQVESSLSKDVLNVKSKKIPK-NLK 645

Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
            GE V V SL +++  V+E+P ++  V VQ G M+V V  + +R
Sbjct: 646 IGEMVEVLSL-NQIGNVLELPDENGNVQVQVGIMKVNVHISTLR 688


>gi|304404921|ref|ZP_07386581.1| MutS2 family protein [Paenibacillus curdlanolyticus YK9]
 gi|304345800|gb|EFM11634.1| MutS2 family protein [Paenibacillus curdlanolyticus YK9]
          Length = 788

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 210/679 (30%), Positives = 346/679 (50%), Gaps = 74/679 (10%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           I D+   L  A  G  L+P+E+  +  T+R+   V K + +    D D +    PLL  +
Sbjct: 68  IVDLTASLKRARIGGTLNPAELLEIAETIRSGRRVKKHVLQLH--DDDPI----PLLHDI 121

Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
              + L+E    E+ I  CID    + +D+AS +L  +R    R + N +S +++   Q+
Sbjct: 122 --ADLLSEHKPTEDAIFACIDDNAEV-MDQASPELASVR----RELRNGESRIREKLEQM 174

Query: 161 FQAGGIDKPL----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
            ++  + K L    IT R  R  + +K+ ++     GI  + SSSGAT F+EP+  V  N
Sbjct: 175 IRSSSVQKMLQDAIITLRNDRYVIPVKSEYRSNF-GGIVHDQSSSGATMFIEPEVIVSMN 233

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N    L  +E  E   +L  LTA  A+   ++    + +  +D AFA+A  A  +    P
Sbjct: 234 NKLRELRANEEREIEKVLQKLTAIAAEVSDDLLADAEGLGMLDFAFAKARLAHELKATLP 293

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
           +++ +  +           +HPLL                                    
Sbjct: 294 LMNDRGFLKLKRG------RHPLL-----------------------------------A 312

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
           +D  VPID+++      +++TGPNTGGKT S+KT+GL SLMS +GL++PA++  ++  FD
Sbjct: 313 ADAVVPIDVELGNSFSTIIVTGPNTGGKTVSLKTIGLLSLMSMSGLFIPAEDGSQMCVFD 372

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            I ADIGD QS+EQNLSTFS H++ I+ IL  ++ +SLVL+DE+G+GTDP+EG ALA +I
Sbjct: 373 AIYADIGDEQSIEQNLSTFSSHLTNIIRILNAMTPKSLVLLDELGAGTDPAEGSALAIAI 432

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L+++  +    V TTHY++L           NA+ EF + TL PTYR+L G  G SNA  
Sbjct: 433 LEHIHRKGSRIVATTHYSELKAYAYNRNGVINASMEFDVATLSPTYRLLVGVPGRSNAFA 492

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           IA+ +G  ++II  A+  V          R   +  SL E+R   E++ ++A SL  E+ 
Sbjct: 493 IAERLGLSQQIIDHARGEV-----SEDDMRVENMIASLEEDRLSAETERQSAESLRRELE 547

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEIN 635
            L  +   E +  + +   L  K  ++ +  +  AK++ + ++ D     L + ++ + +
Sbjct: 548 QLREKHAAEQQRFEEQRDKLLLKAQEEARAAVRKAKLEAEQIISDLRKLALEEGASVKEH 607

Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
            LI+       A  E H+P    + S   ++   P  G++V V SL  K  +V+E+ G +
Sbjct: 608 KLIEARRKLDEASPELHKPKPAANRS-GKSAKIGP--GDEVRVYSLNQK-GSVIELTGSE 663

Query: 696 DTVLVQYGKMRVRVKKNNI 714
              LVQ G M+++V  +++
Sbjct: 664 --ALVQLGIMKMKVSLDDL 680


>gi|386040047|ref|YP_005959001.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa M1]
 gi|343096085|emb|CCC84294.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa M1]
          Length = 789

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 233/738 (31%), Positives = 362/738 (49%), Gaps = 94/738 (12%)

Query: 17  LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           LE  +KLL  T  A A   ++  P   + + DI   +  A  G  LSP E+  +R T++A
Sbjct: 40  LEHIKKLLKGTDEAYAADRLKGVP-SFNGVVDITPAVKRARIGGTLSPQELLGIRTTVQA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
              +   +T        SL   +P+  LL     L+E   LE  I  CID    + LD A
Sbjct: 99  ARRIQVYVT--------SLHEENPVETLLYWSEQLSEQRSLENSIKGCIDENAEV-LDSA 149

Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           S +L  IR E +    R  E LDS+++    +++ Q       LIT R  R  + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           +     GI  + S SGAT F+EP+  V  NN        E  E   IL  LTA +A+   
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
            + Y +D +  +D  FA+A  A+ M    P+++ + ++           +HPL+      
Sbjct: 264 MLLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                     PL+                     VPID+++      +++TGPNTGGKT 
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KT+GL SLM+ +GL++P ++  +L  FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           + ++ +SLVL+DE+G+GTDP+EG ALA SIL+++       V TTHY++L     +    
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHIHALGCRMVATTHYSELKAYAYERKGI 462

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
            NA+ EF + TL PTYR+L G  G SNA  IA+ +G   +I+  A+  V       +  R
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPGRILDYARGEV-----TEEDQR 517

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
              +  SL + R   E +   A  L  E+  L    + E   LD+    L+++  + +++
Sbjct: 518 VEHMIASLEQNRLTAEQEREKAEQLRKEMEALRTRHQTE---LDK----LESQRDRMLEK 570

Query: 607 ELNFAKVQIDTVVQDFENQLRDAS--ADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
             + A+V +D    + E  + D    A E  + +KE +  IAA  E    +       T 
Sbjct: 571 AEDEARVLVDKARSEAEKIITDLRRLAQEEGASVKEHK-LIAARKELDEAEPKQRKKSTA 629

Query: 665 TSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
             S T +      G++V V SL  K   VVE+ G  + + VQ G M+++V  +++  +  
Sbjct: 630 KRSITTRTRSIMAGDEVSVHSLNKK-GHVVELTGSKEAI-VQLGIMKMKVSLDDLELL-- 685

Query: 720 SKRKNAANPAPRLRKQVC 737
              + A   APR++K V 
Sbjct: 686 ---QPAQTTAPRVQKPVT 700


>gi|384246104|gb|EIE19595.1| P-loop containing nucleoside triphosphate hydrolase protein
           [Coccomyxa subellipsoidea C-169]
          Length = 500

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 175/439 (39%), Positives = 243/439 (55%), Gaps = 55/439 (12%)

Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
           L  L  +I  CI      +LD AS  L   RA R++N+  L S +++ A  + + G  ++
Sbjct: 40  LPGLASQIWRCISAGDGRVLDGASSALADTRARRQQNLGELRSTIEEWARSMHRLGAAER 99

Query: 169 PLITKRRSRMCVGIKASHKYLLPDG-IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
             +  RR R+CV +KA  +  LP G + L  SS+GAT++M+P   V  NN E  L+  E 
Sbjct: 100 AQVVVRRDRLCVALKAGRQSDLPKGSVTLATSSTGATFYMDPAPTVPLNNAEAVLAAQER 159

Query: 228 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
            E   IL+ L+A +A +   I  ++D V  +D+  AR   A W  GV             
Sbjct: 160 EEVARILAHLSAAVADNAARIWQVLDAVTALDICSARGRHAVWCGGV------------- 206

Query: 288 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 347
                            LR L    +  N             GS+ + +   P  +D  V
Sbjct: 207 ----------------RLRFLLPEVAAQN-------------GSV-QVLQPPPRAVDFTV 236

Query: 348 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK-----------NHPRLPWFD 396
               RVV +TGPNTGGKTAS+K LGLA+LM KAGL+LP +           + P + WFD
Sbjct: 237 PAGVRVVTVTGPNTGGKTASLKALGLAALMPKAGLFLPLEPTPGKGPPTPFDAPAVAWFD 296

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
           ++LAD+GD QSL+Q+LSTFSGHI R+  IL  ++R SLVL+DE GSGTDP+EG ALA+++
Sbjct: 297 MVLADVGDGQSLQQSLSTFSGHIRRVRAILAALTRRSLVLLDEAGSGTDPAEGAALASAL 356

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L  L DR  L + TTH+A L  L   D+RF NA  EF L +LRPTYR++WGS G SNAL 
Sbjct: 357 LAALADRAALTLATTHHASLKDLAANDSRFCNAGVEFDLASLRPTYRLIWGSVGASNALA 416

Query: 517 IAKSIGFDRKIIQRAQKLV 535
           +A+ +GFD  ++  A+K+ 
Sbjct: 417 VAEGLGFDPLVVAEARKVC 435


>gi|375084730|ref|ZP_09731589.1| MutS2 family protein [Megamonas funiformis YIT 11815]
 gi|374567865|gb|EHR39064.1| MutS2 family protein [Megamonas funiformis YIT 11815]
          Length = 789

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 213/723 (29%), Positives = 352/723 (48%), Gaps = 87/723 (12%)

Query: 24  LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT 83
           L+ T  A  ++ S       I DI  +L     G ++  + +  +  T+ A+ N+ KK  
Sbjct: 47  LSHTQEASNILISSEPPFGGIHDIRSLLKKTSLGLVIEINSLLDILNTMYAMRNL-KKFF 105

Query: 84  EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE-- 141
           +  E+D    + ++  +E+L       +LE +I   +D +   + D AS +L  IR E  
Sbjct: 106 KELEIDSPQFKEWAKSIEIL------GQLEREIDNIVD-EHGSMRDSASVELMRIRREIK 158

Query: 142 --RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
             ++R   NLD +LK    Q +    I    +T R  R  + IK  ++   P G+  + S
Sbjct: 159 SSQRRIKTNLDGILKNPDYQKYFQDNI----VTIRDERYVIPIKQEYRQQFP-GVVHDQS 213

Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
           SSG+T F+EP   V+ NN   +L   E  E   IL +++ +IA++   + +  + + ++D
Sbjct: 214 SSGSTLFIEPMSIVDLNNDIKQLVIDEKREIERILKVISEKIARNADSLLHNCEIMAQLD 273

Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
            AFA+A  A+ M    P       ++ +  +N+   +HPLL                   
Sbjct: 274 FAFAKAKLARKMHATMP------EINDEGIVNLAKARHPLL------------------- 308

Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
                             D  VPIDI++    R ++ITGPNTGGKT SMKTLGL  LM++
Sbjct: 309 ----------------NKDNVVPIDIRLGEGYRTLLITGPNTGGKTVSMKTLGLLVLMTQ 352

Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
           +GL++P ++  ++  F  + ADIGD QS+EQ+LSTFS H+  IV+IL  +  + L+L+DE
Sbjct: 353 SGLFIPVQSGSKISIFQNVYADIGDEQSIEQSLSTFSAHMRNIVNILNNIEHDDLLLLDE 412

Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
           +GSGTDP EG ALA SIL+ L D     V TTHY +L          ENA  EF +++LR
Sbjct: 413 VGSGTDPEEGAALAMSILERLMDIGACTVATTHYNELKTFAYSKEGIENACVEFDIKSLR 472

Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLMEER 558
           PTYR+L G+ G SNA  I+K +G    +I RAQ+L+      +  H + E +  +L  E+
Sbjct: 473 PTYRLLIGTPGASNAFAISKRLGLSDTLILRAQQLI------KADHAQFENVLNTLENEK 526

Query: 559 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 618
              E +    A     I  L +++ D  +++ ++      K  +Q    L   + + + +
Sbjct: 527 LMYEQKNADIAERQQRIEKLEKQLADMKQEMAKKKEQTLRKTKEQCASLLRRTRRESEEI 586

Query: 619 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHV 678
           +++ + Q  D         +K+ +  I A     R   D  VS+ N     P  GE V +
Sbjct: 587 IKELKAQFNDQG-------MKKRQETIDAARHKLRGRLD-KVSQQNDDPNKP--GEAVDI 636

Query: 679 KSL--GD--------KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
           K++  GD        +  T+ ++ G + T  VQ G +++ VK  +   + ++ +     P
Sbjct: 637 KTIAVGDIVYVNKLRQKGTITDISGKELT--VQLGSLKMNVKAKDCSFVSHAVKVKETAP 694

Query: 729 APR 731
           + +
Sbjct: 695 SKK 697


>gi|153810971|ref|ZP_01963639.1| hypothetical protein RUMOBE_01362 [Ruminococcus obeum ATCC 29174]
 gi|149832859|gb|EDM87942.1| MutS2 family protein [Ruminococcus obeum ATCC 29174]
          Length = 793

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 222/705 (31%), Positives = 338/705 (47%), Gaps = 79/705 (11%)

Query: 26  QTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV-WKKLT 83
           QT  AL  + Q   +    ++DI G L     G  LS  EI AV   L   + V      
Sbjct: 49  QTKDALTRLFQKGSISFGNVKDIRGSLKRLEIGSALSIQEILAVCGLLENTSRVKTYSRK 108

Query: 84  EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 143
           E  +L GDSL        +    + LT L  +I  CI  +  I  D AS  L  IR    
Sbjct: 109 ERNDLPGDSLD------SMFDGLSPLTPLSTEIRRCILSEEEIS-DDASPALRQIR---- 157

Query: 144 RNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
           RNM+  +  +    A +        +   +IT R  R C+ +KA +K  +P G+  + SS
Sbjct: 158 RNMKITNDRIHTQLAGLVNGSARTYLQDSVITMRNGRYCIPVKAEYKGQVP-GMIHDQSS 216

Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
           +G+T F+EP   V+ NN    L   E  E   IL+ L+ +IA  +  I   ++ ++++D 
Sbjct: 217 TGSTLFIEPMSVVKLNNDMRELELQEQKEIEVILADLSQQIATEQEAISLNLELMVQLDF 276

Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
            FARA  A  M+   P+ + +        IN++  +HPL+             N   +  
Sbjct: 277 IFARATLAMEMNASEPVFNDEGR------INLKKARHPLI-------------NKKKV-- 315

Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
                               VPIDI++  E  ++VITGPNTGGKT S+KT+GL +LM ++
Sbjct: 316 --------------------VPIDIRLGDEFDLLVITGPNTGGKTVSLKTVGLLTLMGQS 355

Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
           GL++P  +   L  F  + ADIGD QS+EQ+LSTFS H++ IV  L    R SLVL DE+
Sbjct: 356 GLHIPTLDRSELALFHEVYADIGDEQSIEQSLSTFSSHMTNIVSFLGKADRHSLVLFDEL 415

Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
            SGTDP+EG ALA SIL YL +R    + TTHY++L       +  ENA  EF++ETL P
Sbjct: 416 CSGTDPTEGAALAISILSYLHERGIRTMATTHYSELKVFALSASGIENACCEFNVETLSP 475

Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
           TYR+L G  G SNA  I+  +G    II++A++ +       Q     ++  SL E R  
Sbjct: 476 TYRLLIGIPGKSNAFAISSKLGIPESIIEKAREQI-----NEQDESFEDVLTSLEESRIT 530

Query: 561 LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ 620
           +E++    A    EI  L +++E++ + LD +   +  +  ++  + L  AK   D  ++
Sbjct: 531 IENERTEIAQYKLEIETLKKQLENKQEKLDVQKERIIRQANEEAHKVLQDAKDYADQTMK 590

Query: 621 ---DFENQLRDASADE-----INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
               F N+  D +A E     +   + ++E  +A      +P       +  T+      
Sbjct: 591 LFHKFHNEYVDTAAVERERQQLRQRLNKAEQKMA------QPTPKKKPKKVLTAK-DIHL 643

Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
           G+ V V S+  K  TV   P     + VQ G +R +V  +++  I
Sbjct: 644 GDTVRVLSMNLK-GTVSTRPDSKGYLFVQMGIIRSKVHISDLELI 687


>gi|310828853|ref|YP_003961210.1| MutS2 family protein [Eubacterium limosum KIST612]
 gi|308740587|gb|ADO38247.1| MutS2 family protein [Eubacterium limosum KIST612]
          Length = 789

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 228/759 (30%), Positives = 374/759 (49%), Gaps = 108/759 (14%)

Query: 2   GHAVVQKAQ------IPFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNS 53
           GH V + A+      +P+ +++ E ++ L  TS AL MM    +P  LS I++ +  ++ 
Sbjct: 20  GHCVSEGAKERASSLVPY-ETVYEVERALGVTSEALNMMLRNGRP-PLSEIKNTSDYVHR 77

Query: 54  AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELE 113
           A  G +LS  E+ AV   LR V ++        +L+  +L +   L  LL  C    ELE
Sbjct: 78  ASIGAMLSMKELLAVASLLRIVKDMENYYCNDTQLE--TLDQLKNLFTLLAPCE---ELE 132

Query: 114 EKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITK 173
           ++I   I  +  +  D AS +L  IR E       +   L  + +       + + +IT 
Sbjct: 133 KEISHKILSEGEMA-DNASRELSRIRREINFKNTRISDKLNGIISASQNEKYLQERIITI 191

Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
           R +R  V +K  ++  +P GI L+ S+SGAT ++EP   VE NN    L+  E  E   I
Sbjct: 192 RNNRYVVPVKQEYRGQIP-GIVLDRSASGATLYIEPLAVVELNNDLKVLAAEEEKEIIRI 250

Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
           L  L+ ++A  + E+    + ++E+D  FA+  +   + GV       +HVS +  I+  
Sbjct: 251 LKDLSEKVANYKEEVIEDYNLLVELDFQFAKGKYGLAVGGVL------THVSEEGKIHFI 304

Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
             +HPL+                       + ++ V S            DI ++ +   
Sbjct: 305 KGRHPLI-----------------------DPKVVVAS------------DIYMDEDINT 329

Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
           ++ITGPNTGGKT ++KT+GL +LM ++GL++P +       +  I ADIGD QS+EQ+LS
Sbjct: 330 MIITGPNTGGKTVTLKTIGLLNLMVQSGLFVPVREGSATRVYKNIYADIGDEQSIEQSLS 389

Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
           TFS H++ IVDI++    ++LVL DE+G+GTDP+EG ALA SIL  L +R   +V TTHY
Sbjct: 390 TFSSHMTNIVDIMKNADADALVLFDELGAGTDPTEGAALAISILNTLHERGVTSVSTTHY 449

Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
           ++L           NA+ EF + TLRPT+++L G  G SNA  IA+ +G    II+ ++K
Sbjct: 450 SELKEYALVTRGVVNASVEFDVATLRPTFKLLIGVPGKSNAFEIARRLGLSEDIIEASKK 509

Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED--------- 584
           L+     E +  R  E    + E+R+K E++       H EI+ L R+IE+         
Sbjct: 510 LI-----ENEAIRFEETLIKIEEKRKKTEAE-------HEEILRLRRQIENMKAEMADER 557

Query: 585 -----EAKDLDRRAAHLKA-------KETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 632
                E+ ++  RA    +       +ET+++ +E+ + +      V+D      +   +
Sbjct: 558 EKARAESAEMIERAQEEASAIVRDTRQETEEIYKEIRYIQETTAQSVKD------NKKLE 611

Query: 633 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 692
            +   IK+ E  I  + +  RP       +        + G +VHVKSL  K   VV++ 
Sbjct: 612 SLRRKIKDQEKNIFDMYKIARP-----DEDEELDIDDIKMGMKVHVKSL-HKDGEVVKIM 665

Query: 693 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
             D +V+VQ   M+++V   ++     SK K  A P  +
Sbjct: 666 PKDSSVMVQTDNMKLKVGLADL-----SKSKAIAKPKEK 699


>gi|407473381|ref|YP_006787781.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
 gi|407049889|gb|AFS77934.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
          Length = 792

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 214/703 (30%), Positives = 350/703 (49%), Gaps = 72/703 (10%)

Query: 18  EESQKLLNQTSAALAMM---QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           EE + L ++T  A++++    S PL    I D+   +  A  G +LSP  +  V  T+RA
Sbjct: 41  EEVKYLQDETDEAVSLLLKRGSPPL--GGIHDVLSEVKRAEIGGILSPGGLLRVADTIRA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
              +   L +  + +  S     P+LE L+ + N   E+E+ I F        I D AS 
Sbjct: 99  ARKIKGFLKQEKDENNSSY----PILESLIGDLNSYREIEDNI-FNAIVSEEEISDNASS 153

Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           +L  IR + +   +N+ + L  +         +   +IT R  R  V +K  ++ + P G
Sbjct: 154 NLRNIRKQIQIKNDNIRTKLNSIINSSTNKKYLQDAIITIRSERYVVPVKQEYRSIFP-G 212

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           +  + SSSGAT F+EP   V  NN    L  +E  E   IL+ L+  + +    I+    
Sbjct: 213 LIHDQSSSGATLFIEPMAIVNLNNELKELKLNEKKEIEKILTELSEMVGEENEGIRSNQK 272

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            + +ID  FA+   +  M+G  P ++++ +      INI+  +HPLL             
Sbjct: 273 ILSQIDFIFAKGKLSLDMNGSKPNINNRGY------INIKKGRHPLL------------- 313

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
                                G+ D  VP DI +      ++ITGPNTGGKT ++KT+GL
Sbjct: 314 ---------------------GVKDV-VPTDIYLGDNFTTLLITGPNTGGKTVTLKTVGL 351

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
            +LM ++GL +P ++   +  F+ I ADIGD QS+EQ+LSTFS H++ IVDIL  +   S
Sbjct: 352 FTLMMQSGLQVPVEHGTEMAVFENIFADIGDEQSIEQSLSTFSSHMTNIVDILNNLDDNS 411

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP+EG ALA SIL YL +R    V TTHY++L          ENA+ EF
Sbjct: 412 LVLFDELGAGTDPTEGAALAMSILDYLYNRKIRTVATTHYSELKVYALTTEGIENASVEF 471

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
           ++ETL PTYR+L G  G SNA  I+K +G    II  A++ +      ++     ++  S
Sbjct: 472 NVETLSPTYRLLIGVPGKSNAFEISKRLGLQDFIIDSAKEFI-----SKENIAFEDVLAS 526

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           + ++R + E     A  L  E+  L  E+E++   ++     +  +  ++ +  L  A+ 
Sbjct: 527 IEKDRIETEKNREEANRLRREVNQLKEELEEKTLKIENNREKILREAREEARNVLLKARA 586

Query: 614 QIDTVVQDFENQLRDASAD---EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
           + + ++    N+L++ S +   E +  ++E++  +   ++    + D S    +  S  P
Sbjct: 587 ESEEIL----NELKEVSIEIEKEQSRRLQEAKEKLKGNID--NIEGDLSEQILSKKSAKP 640

Query: 671 ----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
                 GE V + SL ++  TV+  P ++  VLVQ G M++ V
Sbjct: 641 LASVDIGENVKILSL-NQTGTVLSAPDENGNVLVQVGIMKITV 682


>gi|225181647|ref|ZP_03735087.1| MutS2 family protein [Dethiobacter alkaliphilus AHT 1]
 gi|225167628|gb|EEG76439.1| MutS2 family protein [Dethiobacter alkaliphilus AHT 1]
          Length = 775

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 215/720 (29%), Positives = 355/720 (49%), Gaps = 77/720 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           LE +++   +T+ A+++++   + L  + D+  IL+ A  G +L   ++  V R L+AV 
Sbjct: 39  LELARRWQAETTEAVSLIKRNQIGLERVPDLRRILDVAARGSMLGEEQLFGVWRLLQAVT 98

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
            +     E         + Y  L  L +  + L  L E++   +D +  +  D+AS +L 
Sbjct: 99  KLKGFFKEK--------EGYPVLTGLTRQMDALPNLREELKNTLDEEGRL-RDQASAELL 149

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            +R       ++L     +          + + L+T R  R+ V I+  ++  +P G+  
Sbjct: 150 RLRRSINGGEQDLRERFDRFVRNPGNHKALQENLVTVRGDRLVVPIRQEYRSQVP-GVVH 208

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP  AVE NN    L   E  E   IL  L+      +  +   +    
Sbjct: 209 DQSASGATLFIEPLWAVEANNRLTVLRREEEKERERILVRLSQWAGGEKETLVTSLTLYA 268

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           E+D   A+A  +       P L+ + ++   S       +HPLL G              
Sbjct: 269 ELDFIIAKARLSLAQKASEPKLNDRGYLHILSG------RHPLLTG-------------- 308

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
               DV                  VPI +++    R +VITGPNTGGKT ++KT+GL S+
Sbjct: 309 ----DV------------------VPISLEMGENLRTLVITGPNTGGKTVTLKTVGLFSI 346

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+++GL++PA+    L  F  I ADIGD Q + Q+LSTFSGH+  I+DIL  +   SLVL
Sbjct: 347 MAQSGLHVPAEEGSELAVFPRIFADIGDEQDITQSLSTFSGHLKNIIDILGQLVPGSLVL 406

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
           +DE+G+GTDP+EG  LA +IL+YL +   + V TTHY+ L          ENA+ EF + 
Sbjct: 407 LDEVGAGTDPTEGAGLAMAILEYLHNFGAVTVGTTHYSQLKTFAYVTQGMENASVEFDVA 466

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TLRPTY++L G  G SNA  IA+ +G D+ II+R ++ +      +++ R  E+   L+ 
Sbjct: 467 TLRPTYQLLVGVPGVSNAFAIAQRLGLDQDIIRRGKEFL-----SQEETRLEEVVADLVA 521

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
           +R+++E  +R       +   L  +I+ E +DL RR + +  K  +  Q+ +  AK +  
Sbjct: 522 DRQRIEVVSRQVEDERQQSKALLLQIQQEKEDLARRKSEILEKARRDAQETVISAKRE-- 579

Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP------ 670
              Q    QLR  +A   + L +E E+A   +    + D DF+  + + S+  P      
Sbjct: 580 --AQQLLKQLRKMAA-AASPLQEEVENAAEKL---RKLDTDFTELQVSQSTSKPLSAEEL 633

Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
             G +V+V SLG +  TVV+       + VQ G MR+ V+  ++  +  +K++   +P P
Sbjct: 634 TEGSEVYVNSLGQR-GTVVK--AGQSQIQVQVGMMRITVEPADLSYVKPTKKE---SPRP 687


>gi|373494347|ref|ZP_09584952.1| hypothetical protein HMPREF0380_00590 [Eubacterium infirmum F0142]
 gi|371968844|gb|EHO86298.1| hypothetical protein HMPREF0380_00590 [Eubacterium infirmum F0142]
          Length = 796

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 206/716 (28%), Positives = 353/716 (49%), Gaps = 62/716 (8%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           ++L + T A   +M+   L    + DI   L  A  G  L+  ++  V+  L   + V  
Sbjct: 45  EELRSTTEAVDLIMRKGTLPTGGLYDIREALLLAKKGGSLTMRQLLEVQNVLAISSEV-- 102

Query: 81  KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
                A +  D+L     + E++      T LE++I  CI  +  +  D AS  L+ IR 
Sbjct: 103 ----VAFMHDDALPELKHIGEMVDLIVEFTALEKEISRCILTEDEMA-DNASPKLKDIRR 157

Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
              R  + +   L ++         +   ++T R  R  + +K  ++   P G+  + S 
Sbjct: 158 SIHRQNQAIKDKLSRIITSSSNKTYLQDAIVTMRDGRYVIPVKQEYRSFFP-GMVHDQSK 216

Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
            GAT F+EP+G VE NN    L   E  E   IL+ L++ +A+  REI+  ++ + ++D 
Sbjct: 217 GGATLFIEPQGVVESNNKLRELEAEEQLEIARILAELSSRVAEHYREIRSNLELLTKLDF 276

Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
             A+   +      C + +S+  +  D  + +   +HPL                     
Sbjct: 277 IMAKGKLS------CKMHASEPKIDADGELRLLSARHPL--------------------- 309

Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
            +E  +              VP+DI++  + R ++ITGPNTGGKT S+KT GL  +M+++
Sbjct: 310 -IEYKK-------------AVPVDIRIGGDYRTLIITGPNTGGKTVSLKTAGLLVMMAQS 355

Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
           GL++PA +   LP F  + ADIGD QS+EQ+LSTFS H+  IV +++  S +SLVL+DE+
Sbjct: 356 GLHIPASHASTLPVFGDVFADIGDEQSIEQSLSTFSSHMKNIVSVIDKASYDSLVLVDEL 415

Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
           G+GTDP+EG ALA +IL+   D   L + TTHY +L       +  ENAA EF +ETL P
Sbjct: 416 GAGTDPTEGAALAIAILERFYDSGALTMATTHYNELKKYALATSGVENAAMEFDVETLTP 475

Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
           TYR+L G  G SNA  I+K +G    +I+RA + ++    E +      +  S+ +++RK
Sbjct: 476 TYRLLIGVPGKSNAFEISKKLGLSESVIERASEHIKHGDMEFEN-----VISSIEDDKRK 530

Query: 561 LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ 620
             +    A  +  EI +  R++E++ K +  + A + A+  ++ ++ L   K  +  V +
Sbjct: 531 AAADRLDAEEMRDEIEERLRKLEEKEKAISEKRADIIAEAKREARELLRETKSAVKDVQK 590

Query: 621 DFEN-QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT---SSFTPQFGEQV 676
           D    Q   A  +  N+     E +   + EA     +  V + N+   S+ T + G++V
Sbjct: 591 DLRKLQKSGARTNGFNT--GALEKSRRKLNEAENLVSEKVVKQVNSEPVSADTIKIGDRV 648

Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK-RKNAANPAPR 731
            + +LG    T++ +P +   ++V  G ++V+ +  ++  I   K RK  A  + R
Sbjct: 649 KLLTLGQN-GTILSLPDEKGNLMVNIGVLKVKARLEDLMLINEGKDRKPQAKSSSR 703


>gi|242039141|ref|XP_002466965.1| hypothetical protein SORBIDRAFT_01g017480 [Sorghum bicolor]
 gi|241920819|gb|EER93963.1| hypothetical protein SORBIDRAFT_01g017480 [Sorghum bicolor]
          Length = 831

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 230/754 (30%), Positives = 370/754 (49%), Gaps = 89/754 (11%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIA--GILNSAVSGQLLSPSEICAVRRT 71
           S E+SQ+LL +T AA+ ++ +    +D S ++ +A    ++    G ++   E  AV   
Sbjct: 85  SYEQSQRLLQETEAAVWLLDNAGGAMDFSGLDTVAIESAIHCVSGGAVIKGLEAMAVASL 144

Query: 72  LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           +  V ++   +  A +LD  S  R + L E + +      L + I   ID     + D A
Sbjct: 145 MLFVESLQVNIKAAIKLDEGSRSRLTTLTETILDAVINKSLVKSIQDIIDDDG-SVKDTA 203

Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
           S +L   R + +R    L  L+ K+         + +  I     R C+     +  +  
Sbjct: 204 SPELRRYRDQVQRLESRLYQLMDKLMRNADDEASLSEVCIVN--GRCCIRTTTDNSSIF- 260

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKY 250
           DG+ L+ S SGA   +EP  A+  N+ E++ S + +A+ E  +LS LT +I      I+ 
Sbjct: 261 DGLLLS-SGSGAGSMIEPIAAIPLND-ELQESRALVAKAELDVLSKLTDKILLDLDSIQN 318

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILS----SQSHVSFDSSINIEGIK---------- 296
           L+   +++D   ARA ++   DG  P L         V+  +  ++E I           
Sbjct: 319 LLQETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSATCGSVEQISSAQLPKKAWK 378

Query: 297 -------HPLLL-------GSSLRSLSAASSN------------SNPLKSDVENSEMTVG 330
                  HPLLL         + R +++A++              + L SD+++ ++ V 
Sbjct: 379 LYMPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQDIAEDQLASDLDSMKLRVS 438

Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
            L K   D PVP+D  V  ET V+VITGPNTGGKT S+KT+GLASLM+K GLY+ A    
Sbjct: 439 QLEK---DQPVPVDFMVAEETTVLVITGPNTGGKTISLKTVGLASLMAKIGLYILASEPV 495

Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
           ++PWF+ + ADIGD QSL Q+LSTFSGH+ +I  I    + ESLVL+DE+G+GT+P EG 
Sbjct: 496 KIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAESTSESLVLLDEVGAGTNPLEGA 555

Query: 451 ALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
           AL  S+L+   D    L + TTH+ +L  LK  +  FENA  EF  E L+PT++ILWG  
Sbjct: 556 ALGMSLLESFADAGSFLTLATTHHGELKTLKYSNNSFENACMEFDEENLKPTFKILWGIP 615

Query: 510 GDSNALNIAKSIGFDRKIIQRAQKL--------------VERLRPERQQHRKSELYQSLM 555
           G SNA+NIA+ +G    I++ ++ L              +ER + E QQH         +
Sbjct: 616 GRSNAINIAERLGLPLDIVESSRHLLGTAGAEINALIMDMERFKQEYQQH---------L 666

Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL--NFAKV 613
           +E + L  Q++    LH  +    + I D      +R A + ++     +  +   F ++
Sbjct: 667 QEAQYLLMQSK---ELHNNLELAQKNIVDHTSAQRKRKARVISEYAVMARSIIRKKFQQL 723

Query: 614 QIDTVVQDF--ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ 671
           Q   + +    E  + DA +D +   +  + SAI    +    D +  ++  +     P+
Sbjct: 724 QESAIAERLKEEKAVNDAKSDTVKDHVLANTSAIG---KTQNIDTNLGMATNDDEGGVPE 780

Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
            G+ V+V  L ++ ATVV++    D V VQ G M
Sbjct: 781 VGDSVYVPKLKNE-ATVVKIDLSKDEVQVQAGMM 813


>gi|160893752|ref|ZP_02074536.1| hypothetical protein CLOL250_01306 [Clostridium sp. L2-50]
 gi|156864737|gb|EDO58168.1| MutS2 family protein [Clostridium sp. L2-50]
          Length = 791

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 201/637 (31%), Positives = 313/637 (49%), Gaps = 58/637 (9%)

Query: 91  DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
           DSL  YS  +EL+     L  L ++I  CI  +  I  D AS  L+ +R  +K   E L 
Sbjct: 117 DSL--YSRFMELVP----LEHLSQEIHRCILSESEIA-DDASSGLKAVRRNKKLTNEKLH 169

Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
           + L K+     +       LIT R  R C+ +K  +K   P G+  + SSSG T F+EP 
Sbjct: 170 NQLNKLVTDQSKQTMFQDNLITMRNGRYCIPVKQEYKNSFP-GMIHDQSSSGNTVFIEPL 228

Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
             V  NN    L N E+AE   IL  L+A  A     IK+  + + ++D  FARA FA+ 
Sbjct: 229 AVVNLNNQLKELDNQELAEIEKILENLSARAASEYENIKFDFETLTDLDFIFARANFARS 288

Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
             G  PI ++      D  ++I+  +HPLL                         + TV 
Sbjct: 289 YKGTEPIFNT------DGIVDIKQGRHPLL------------------------DKHTV- 317

Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
                     VP+DI++  +  +++ITGPNTGGKT S+KTLGL +LM ++GL++PA +  
Sbjct: 318 ----------VPVDIRLGEDYNLLIITGPNTGGKTVSLKTLGLFTLMGQSGLHIPALDGS 367

Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
           RL  FD + ADIGD QS+EQ+LSTFS H+S +V I+  V+  +L L DE+G GTDP EG 
Sbjct: 368 RLNVFDDVFADIGDEQSIEQSLSTFSSHMSNVVYIMNHVTPNTLCLFDELGGGTDPVEGA 427

Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
           ALA +IL  L D+    + TTHY++L          +NA+ EF + TL PTYR++ G  G
Sbjct: 428 ALAIAILSSLNDQDIRCMATTHYSELKLFAMSTPGVQNASCEFDVATLMPTYRLIIGIPG 487

Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
            SNA  I+K +G    II+RA+  ++  + + +      L   L   R+++E      A 
Sbjct: 488 KSNAFAISKKLGLSDDIIERAKTNIDSNKVDFET-----LLSDLENSRKEIERDKAEIAR 542

Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
              E   L    + +  +L  + A + A   ++    L  AK   D+ ++ +     +  
Sbjct: 543 FKEEARQLQERAKAKDDELSAKKAQILADAREEAADILEEAKEMADSAIKKYNKWTTNPH 602

Query: 631 ADEINSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 688
             + +++  E +     + +  +  P+   S++  +T+    + G+ VHV S+ D   TV
Sbjct: 603 KADASTMENERKKLRTKMDDYRKMTPEKRKSMTSHHTAK-DFKAGDTVHVISM-DTTGTV 660

Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
                    + VQ G +   +  +++  I   K+ NA
Sbjct: 661 TAPADSKGNIKVQMGILSSLLPASDLVIIETPKQNNA 697


>gi|253682073|ref|ZP_04862870.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum D str. 1873]
 gi|253561785|gb|EES91237.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum D str. 1873]
          Length = 785

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 213/645 (33%), Positives = 324/645 (50%), Gaps = 80/645 (12%)

Query: 91  DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
           D  ++Y+ L  + +    L+ LEE+I  CI  +  I  DRAS  L  IR   K    ++ 
Sbjct: 110 DENEKYTVLESITEGIVPLSGLEEEIFKCIIGEEEI-SDRASTTLFNIRRSLKDKTSSIK 168

Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
           S +  +     Q   + + + T R  R  + +K  HK  +P G+  + SSSGAT F+EP 
Sbjct: 169 SRVNSLIRTYSQH--LQENIYTVRGERYVLPVKVEHKGAVP-GLVHDQSSSGATLFIEPM 225

Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
             V+ NN    L   E  E   IL++L+ ++  +   IK   D + E+D  FA+A +A  
Sbjct: 226 SLVDLNNEIKELRLKERDEIERILTVLSQKVYDNIDVIKVNADILWELDFIFAKAKYAAK 285

Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
           +D +CP ++   H       NI   KHPL+               +P K  VEN+     
Sbjct: 286 LDAICPTITEDGH------FNIIRAKHPLI---------------DP-KKVVENNIY--- 320

Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
            L  GI+                +VITGPNTGGKT ++KT+GL  +M+ +GL + A    
Sbjct: 321 -LRDGITS---------------LVITGPNTGGKTVTLKTVGLMHIMAMSGLMITASQGS 364

Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
            + +F  + ADIGD QS+EQ+LSTFS H++ IV+I++     SLVL DE+G+GTDP+EG 
Sbjct: 365 TISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDNADENSLVLFDELGAGTDPTEGA 424

Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
           ALA SIL+ LR+R    + TTHY++L     K  R ENA+ EF +ETLRPTYR+L G  G
Sbjct: 425 ALAVSILENLRERNTKVIATTHYSELKAYALKVDRVENASVEFDVETLRPTYRLLIGVPG 484

Query: 511 DSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTA 568
            SNA  I+K +G    II+ A+K +  E L+ E       +L QSL  +  K +  AR A
Sbjct: 485 KSNAFEISKRLGLPDYIIEDAKKGIDEETLKFE-------DLIQSLQHKNIKAQEHAREA 537

Query: 569 ASLHAEIMDLYREIE---DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
                E + L  + E   D+ KD+  +A     KE +++ +E   AK + D +++D    
Sbjct: 538 QGAREEAVKLKEKYESKLDKFKDIREKAILNAQKEAKEIIKE---AKEEADKILKDIREL 594

Query: 626 LRDASADEINSLIKESE-----SAIAAIVEAHRPDDDF----SVSETNTSSFTPQFGEQV 676
            R   + ++  L++E+             + ++P D       VSE +   + P+F  +V
Sbjct: 595 ERMGYSSDVRKLLEENRKKLKEKLEKTEEKLNKPKDVGEPIDKVSEGD-EVYLPKFDTKV 653

Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
                      V+  P     V VQ G M+++V   ++R    +K
Sbjct: 654 ----------MVLTNPDSKGDVQVQAGIMKIKVNIKDLRKTKETK 688


>gi|226311231|ref|YP_002771125.1| DNA mismatch repair protein [Brevibacillus brevis NBRC 100599]
 gi|254766594|sp|C0Z9F1.1|MUTS2_BREBN RecName: Full=MutS2 protein
 gi|226094179|dbj|BAH42621.1| DNA mismatch repair protein [Brevibacillus brevis NBRC 100599]
          Length = 785

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 222/737 (30%), Positives = 365/737 (49%), Gaps = 81/737 (10%)

Query: 11  IPFGKSLEE---SQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           IPF + L+E   +Q+   Q +  L +  S PL    I DI G +  A    +L+P E+  
Sbjct: 35  IPFLR-LDEVINAQQGTEQAATVLRLKGSVPL--GGIRDIRGPVQRARLNAMLAPMELLD 91

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLI 126
           +  T+ A   +   L +    D   L    PLL+   +    L ELE +I  C+D     
Sbjct: 92  IASTVMAGRRLKTFLLDMC--DDHEL----PLLQQQAERIEGLRELETEIRRCVDENG-D 144

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 182
           ILD AS +L  +R E    +  L+S +++   Q+ ++    K L    +T R  R  + +
Sbjct: 145 ILDSASLELRQVRQE----IRQLESRIREKLDQMTRSSTYQKMLMENIVTIRGDRFVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           K  ++ +   GI  + S+SGAT F+EP+  VE NN    L   E  E   IL +LT +++
Sbjct: 201 KQEYRSVF-GGIVHDQSASGATLFIEPEVIVEMNNKLRELRLREEREVERILYVLTEQVS 259

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
            +   +    + + E+D  FA+A  A  M  +CP ++ + +V      N+   +HPL+  
Sbjct: 260 FAVEALVENTEALTELDFMFAKAQLAWSMKAICPRINDRGYV------NMRKARHPLI-- 311

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                         P                    +  VP+D+++  E + +V+TGPNTG
Sbjct: 312 --------------P-------------------REVVVPVDVELGGEYQAIVVTGPNTG 338

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT S+KT+GL SLM+ AGL++PA+    +  F  I ADIGD QS+EQ+LSTFS H++ I
Sbjct: 339 GKTVSLKTIGLLSLMTMAGLHIPAEEESEMTVFSSIFADIGDEQSIEQSLSTFSSHMTNI 398

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           + IL  +  +SLVL DE+G+GTDP+EG ALA SI+ ++ D     V TTHY++L      
Sbjct: 399 IQILAKMDDKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSGARLVATTHYSELKAYAYD 458

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
                NA+ EF ++TLRPTYR+L G  G SNA  IA+ +G    II      V R     
Sbjct: 459 RPEVINASVEFDVQTLRPTYRLLIGVPGRSNAFAIARRLGLPEHIID-----VARGSISE 513

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
           + ++   +  SL   R+  E+    A +   E  +L  ++E+E        A  K K  +
Sbjct: 514 EDNQVESMIASLERNRKSAEADRLAAKAARQEAEELRTQLEEERAQF----AEEKNKRME 569

Query: 603 QVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
           + + E    +  AK + +T++++    + +    + + LI   +    A++E  +     
Sbjct: 570 RAEDEARIAVQLAKEEAETIIRELREMMAEGMEIKEHRLIDAKKRLGNAVLELEKEKVKK 629

Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
                  +    + G++V V S G K  TV+E   +++  LVQ G M+++VK++++    
Sbjct: 630 PAKAVRATQI--KVGDEVMVTSFGQK-GTVLEKVNNEE-FLVQIGIMKMKVKRDDMHVQN 685

Query: 719 NSKRKNAANPAPRLRKQ 735
           + ++K  A P   ++++
Sbjct: 686 SIQQKPQAAPYTSVKRR 702


>gi|357011634|ref|ZP_09076633.1| recombination and DNA strand exchange inhibitor protein
           [Paenibacillus elgii B69]
          Length = 795

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 207/678 (30%), Positives = 341/678 (50%), Gaps = 71/678 (10%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS-PLL-E 101
           I DI   ++ A  G +L+P E+  +  T +    + + L EA   D      YS PLL +
Sbjct: 75  IRDIRAAVHRARIGGMLNPVELLDIAMTSQGGRRLGRFL-EATNED------YSIPLLLD 127

Query: 102 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVA 157
           LL+      ELEE+I  C+D    + +D AS +L  IR E +    +  E L+ +++  +
Sbjct: 128 LLEPMTDHKELEERIRGCVDENAQV-MDTASTELLKIRQELRSSESKARERLEQMVRTPS 186

Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
            Q      +   L+T R  R  + +K  ++     G+  + S+SGAT F+EP+  V+ NN
Sbjct: 187 IQKM----LQDNLVTIRGDRYVIPVKQEYRGHF-GGMIHDQSASGATLFIEPEAVVQMNN 241

Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
               L   E AE   IL +L+A +A S   +   ++ + E+D  FA+AG A+ M    P+
Sbjct: 242 RVRELKLKEEAEVEKILRMLSALVADSADTLLVNVESLTELDFIFAKAGVAREMKATLPL 301

Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
           L+ +  +           +HPL+    +                                
Sbjct: 302 LNDRGFIKLKRG------RHPLIPAEKV-------------------------------- 323

Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
              VP+D+++      +++TGPNTGGKT S+KT+GL SLM+ AGL++PA+   +L  FD 
Sbjct: 324 ---VPLDVELGNRYSTIIVTGPNTGGKTVSLKTIGLLSLMAMAGLFVPAEEGSQLCVFDA 380

Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
           I ADIGD QS+EQNLSTFS H++ I+ IL  ++ +SLVL+DE+G+GTDP+EG ALA SIL
Sbjct: 381 IFADIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISIL 440

Query: 458 QYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           +++  R+G  +V TTHY++L           NA+ EF ++TLRPTYR+L G  G SNA  
Sbjct: 441 EHMH-RMGCRIVATTHYSELKAYAFDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAFA 499

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           IA+ +G  + II  A+  V       +  R   +  +L E R + E++  +A     E+ 
Sbjct: 500 IAERLGLAKTIIDHARGQV-----GEEDQRVESMIATLEENRLQAEAERESAERNRREVE 554

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 636
            L  ++  E +  + +   L  +  ++ Q+ +  A+ + D ++ +     R+ +    + 
Sbjct: 555 TLREQLAAERRRFEEQKDKLFERAEREAQEAVAKARREADEIITELRRIQREEAGGVKDH 614

Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 696
            + E +  +       R                P  G++V V +LG +   VVE+  + +
Sbjct: 615 KLSELKRRMNDAAPELRSKSKAGTPRKKADRIGP--GDEVLVTNLGQR-GHVVELVSETE 671

Query: 697 TVLVQYGKMRVRVKKNNI 714
            V VQ G ++++V K ++
Sbjct: 672 -VTVQLGILKMKVNKADL 688


>gi|159901402|ref|YP_001547649.1| MutS2 family protein [Herpetosiphon aurantiacus DSM 785]
 gi|159894441|gb|ABX07521.1| MutS2 family protein [Herpetosiphon aurantiacus DSM 785]
          Length = 806

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 228/716 (31%), Positives = 353/716 (49%), Gaps = 96/716 (13%)

Query: 26  QTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
           +TSAA A+++S   + +    D+   +  A  G +L  S +  +  TL A+         
Sbjct: 50  RTSAARALIESFADVSIGGARDVRPAVEHARRGGILEASRVQEIAATLGAMRR------- 102

Query: 85  AAELDGDSLQRYS------PLLELLKNCNFLT-ELEEKIGFCIDCKLLIILDRASEDLEL 137
              L G  L+ +       PL E L N   L  E+E  IG   D +   +LD AS +L  
Sbjct: 103 ---LRGQVLRNHPDFVPLHPLAEQLPNLATLEHEIERTIG--PDGE---VLDSASAELGR 154

Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
           +R+  +     L   L+ +      A  + +P+IT R  R  V +KA  +  L  GI  +
Sbjct: 155 LRSAIRVAFNRLQERLQAIINSSQYADVLQEPIITVRDGRYVVPVKAPQRRAL-RGIVHD 213

Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
            SSSGAT ++EP   VE NN    L  +E  E   IL+ L+ +IA     I   ++   E
Sbjct: 214 QSSSGATLYIEPLATVELNNQWRELQLAEREEIQRILAALSGKIANEGMPIIVGVEATAE 273

Query: 258 IDLAFARAGFAQWMDGVCPILSS---QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
           +DLAFA+A ++  +    P +++      +  +S++++   +HPLL              
Sbjct: 274 LDLAFAKAKYSISLRASQPAINTPVPADDLHPESTLSLLKARHPLL-------------- 319

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
                                  D  VP D+ +   T++++ITGPNTGGKT ++KT+GL 
Sbjct: 320 ---------------------NQDLVVPTDVWLGGPTQMIIITGPNTGGKTVALKTVGLM 358

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
           +LM++AGL++PA    RLP F  I ADIGD QS+EQ+LSTFS H++ I+ IL+ V+ +SL
Sbjct: 359 ALMAQAGLHIPAHQGSRLPIFGKIFADIGDEQSIEQSLSTFSSHMTNIIQILDRVTPDSL 418

Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
           VL DE+G+GTDP EG ALA +I++ L +   LA+ T+HYA+L          ENA+ EF 
Sbjct: 419 VLFDELGAGTDPVEGAALARAIIERLLNVGCLAMATSHYAELKAFAYSTDGVENASVEFD 478

Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
           +ETL PTYR+  G  G SNAL IA+ +G  R +I+RA+  +      R   +  +L  ++
Sbjct: 479 VETLSPTYRLSIGLPGRSNALAIAERLGLKRDLIERARATI-----SRDNVQVEDLLAAI 533

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
             ER   ES+A  A  L           ED     DR +  L   E  + QQ  ++ + Q
Sbjct: 534 HRERTTAESEAARALELR----------EDAELVRDRLSRELYEFEQDREQQLASYQR-Q 582

Query: 615 IDTVVQDFENQLRDASADEINSL------IKESESAIAAIVE-----AHRPDDDFSVSET 663
           +D  +++   +LR    DE  S+      ++++E  ++ + E        P     V   
Sbjct: 583 LDDELREVRAELRRLR-DEFRSVSVSRQWMEQAEQRLSRVAERVPQTPTPPKAKVPVVPK 641

Query: 664 NTSSFTP---QFGEQVHVKSLGDKLATVV-EVPGDDDTVLVQYGKMRVRVKKNNIR 715
              +  P   Q G+QV V S+  KL+ VV ++  + +   VQ G  R+RV    +R
Sbjct: 642 VALAPLPRTIQVGDQVFVSSV--KLSGVVLDLDEEANEAEVQLGGFRLRVDLRELR 695


>gi|323702088|ref|ZP_08113756.1| MutS2 family protein [Desulfotomaculum nigrificans DSM 574]
 gi|333923406|ref|YP_004496986.1| MutS2 protein [Desulfotomaculum carboxydivorans CO-1-SRB]
 gi|323532970|gb|EGB22841.1| MutS2 family protein [Desulfotomaculum nigrificans DSM 574]
 gi|333748967|gb|AEF94074.1| MutS2 protein [Desulfotomaculum carboxydivorans CO-1-SRB]
          Length = 783

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 210/670 (31%), Positives = 338/670 (50%), Gaps = 84/670 (12%)

Query: 60  LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
           LS  E+ AV  TL A   + K   E +        RY  L EL +      +LE+ I   
Sbjct: 83  LSAEELLAVGETLAASRRIKKFFAEKS-------SRYPLLNELAEALTIQAQLEKNILRA 135

Query: 120 IDCKLLIILDRASEDLELIRA---ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
           I     I  D + E L++ R     + R  E ++S+++    Q +    +  P+IT R  
Sbjct: 136 ILPGGEIADDASPELLQIRRGLARAQNRVRERMESIIRSSENQKY----LQDPIITIRND 191

Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
           R  V +K  ++  +P GI  + S+SGAT F+EP  AVE NN   RL  +E  E   IL  
Sbjct: 192 RYVVPVKQEYRNQIP-GIVHDQSASGATLFIEPMAAVEANNEVRRLMVAEQQEIQKILVE 250

Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
           L+  ++    ++   MD + ++D   A+A +++ ++ + P +   + V      +I+  +
Sbjct: 251 LSNGVSAIAEDLTITMDALGQLDFIMAKARYSRTLNALSPTIIDGARV------DIKKGR 304

Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
           HPLL                                     +  VP  I +  + R +VI
Sbjct: 305 HPLL------------------------------------GEDAVPATISLGKDFRTLVI 328

Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
           TGPNTGGKT ++KT+GL +LM+++GL++PA+    +  F+ + ADIGD QS+EQ+LSTFS
Sbjct: 329 TGPNTGGKTVTLKTVGLFTLMTQSGLHIPAEAGSEMGIFNQVFADIGDEQSIEQSLSTFS 388

Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
            H++ IV+IL      SLVL+DE+G+GTDP+EG ALA +IL+ L  R    + TTHY++L
Sbjct: 389 SHMTNIVNILNRADTGSLVLLDELGAGTDPTEGAALARAILEELHGRGACTIATTHYSEL 448

Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
                     ENA+ EF +ETLRPTYR+L G  G SNA  I+  +G    I+QRA++ + 
Sbjct: 449 KNYAYTTPGVENASVEFDVETLRPTYRLLIGRPGRSNAFEISARLGLQPAIVQRARQFL- 507

Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLH---AEIMDLYREIEDEAKDLDRRA 593
                 +Q + ++L   L + ++  E     AA L     EI + YR++E++ +  ++R 
Sbjct: 508 ----TTEQVQVADLINKLEQTQQAAERDREEAAILRRESEEIKERYRQLEEQLR--EKRE 561

Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI---VE 650
           A L+ K  ++  + +  ++++ +  V++   +L  A+A +    IK++   +  +   V 
Sbjct: 562 AILE-KAYEEASKLVRASRLEAEEAVKELRAKLAQANARDREEAIKQARQKLQRVTSKVA 620

Query: 651 AHRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
           A  P       E  T    P+    GEQV +     K A V+ V GD+  V VQ G M++
Sbjct: 621 AKEP-------ERTTPGEIPRQVKPGEQVFLPKYNQK-AYVLSVSGDN--VQVQVGIMKM 670

Query: 708 RVKKNNIRPI 717
            V    +R +
Sbjct: 671 FVPLKELRRV 680


>gi|308068160|ref|YP_003869765.1| MutS2 protein [Paenibacillus polymyxa E681]
 gi|305857439|gb|ADM69227.1| MutS2 protein [Paenibacillus polymyxa E681]
          Length = 789

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 227/733 (30%), Positives = 356/733 (48%), Gaps = 84/733 (11%)

Query: 17  LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           LE  +K+L  T  A A   ++  P   + + DI   +  A  G  LSP E+  +R T++A
Sbjct: 40  LEHIKKMLKGTDEAYAADRLKGVP-SFNGVVDITPAVKRARIGGTLSPQELLGIRTTVQA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
              +   +T        SL   +P+  LL     L+E   LE  I  CID    + LD A
Sbjct: 99  ARRIQVYVT--------SLHEENPVETLLYWSEQLSEQRGLENSIKGCIDENAEV-LDSA 149

Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           S +L  IR E +    R  E LDS+++    +++ Q       LIT R  R  + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           +     GI  + S SGAT F+EP+  V  NN        E  E   IL  LTA +A+   
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
            + Y +D +  +D  FA+A  A+ M    P+++ + ++           +HPL+      
Sbjct: 264 MLLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                     PL+                     VPID+++      +++TGPNTGGKT 
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KT+GL SLM+ +GL++P ++  +L  FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           + ++ +SLVL+DE+G+GTDP+EG ALA SIL+++       V TTHY++L     +    
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHIHAMGCRMVATTHYSELKAYAYERKGI 462

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
            NA+ EF + TL PTYR+L G  G SNA  IA+ +G   +I+  A+  V       +  R
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPGRILDYARGEV-----TEEDQR 517

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
              +  SL + R   E +   A  L  E+  L    + E   L+ +   +  K   + + 
Sbjct: 518 VEHMIASLEQNRLTAEQEREKAEQLRKEMEALRSRHQTELDKLESQRDRMLEKAEDEARV 577

Query: 607 ELNFAKVQIDTVVQDFEN--QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
            ++ A+ + + ++ D     Q   AS  E + LI   +    A  +  +       + T 
Sbjct: 578 LVDKARSEAEKIITDLRKLAQEEGASVKE-HKLIAARKELDEAEPKQRKKSTVKRPAATR 636

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
           T S     G++V V SL +K   VVE+ G  + V VQ G M+++V  +++  +     + 
Sbjct: 637 TRSIMA--GDEVSVHSL-NKKGHVVELSGTKEAV-VQLGIMKMKVSLDDLELL-----QP 687

Query: 725 AANPAPRLRKQVC 737
           A    PR++K V 
Sbjct: 688 AQTTTPRVQKPVT 700


>gi|386726811|ref|YP_006193137.1| recombination and DNA strand exchange inhibitor protein
           [Paenibacillus mucilaginosus K02]
 gi|384093936|gb|AFH65372.1| recombination and DNA strand exchange inhibitor protein
           [Paenibacillus mucilaginosus K02]
          Length = 775

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 205/693 (29%), Positives = 352/693 (50%), Gaps = 73/693 (10%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           I DI   L+ A  G +L+P+E+  +  T +    + + L        +S+    P+  L+
Sbjct: 55  IRDIRPALHRARIGGMLTPAELLDIALTSQGGRRLQRFL--------ESINEDYPVPLLV 106

Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
           ++   +T+   LE++I  CID    ++ D AS +L  IR+E +    +  E L+ +++  
Sbjct: 107 ESTEPMTDHKALEDRIRQCIDENAHVV-DSASPELARIRSELRGSESKARERLEQMVRTP 165

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           + Q      +   L+T R  R  + +K  ++     G+  + S+SGAT F+EP+  V+ N
Sbjct: 166 SIQKM----LQDNLVTIRNDRYVIPVKQEYRSHF-GGMIHDQSASGATLFIEPEAVVQMN 220

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N    L   E AE   IL +L+A +A++   +   ++ + E+D  FA+AG A+ M    P
Sbjct: 221 NRVRELKLKEEAEVEKILRMLSALVAEAADLLVVNVEILGELDFIFAKAGLARTMKATLP 280

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
           +L+ +  +           +HPL+          AS N                      
Sbjct: 281 LLNDRGFIKLKRG------RHPLI----------ASENV--------------------- 303

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
               VP+D+++  +   +++TGPNTGGKT S+KT+GL SLM+ +G+++PA+   +L  FD
Sbjct: 304 ----VPLDVELGGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFD 359

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            I ADIGD QS+EQNLSTFS H++ I+ IL  ++ +SLVL+DE+G+GTDP+EG ALA SI
Sbjct: 360 AIYADIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISI 419

Query: 457 LQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           L Y+  R+G  +V TTHY +L           NA+ EF ++TLRPTYR+L G  G SNA 
Sbjct: 420 LDYMH-RMGCRIVATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAF 478

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            IA+ +G  R II+ A+  V       ++ R   +  +L +   + E++  TA  L  E+
Sbjct: 479 AIAERLGLSRSIIENARGQV-----GEEEQRVESMIATLEQNTIQAEAERVTAQELRREV 533

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
             L  ++  E    + +   L  K  ++ ++ +  A+ + + V+ +     R+ +    +
Sbjct: 534 ETLREKLNAERHRFEEQRDKLLEKAEREGREAVAKARREAEEVIAELRRLQREEAGGVKD 593

Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
             + E +  +       R      + +    +  P  G++V V +LG +   V  V   +
Sbjct: 594 HKLSELKKKLNDAAPELRSKQVSQLPKKKPETIGP--GDEVLVTNLGQRGHVVDVVNAQE 651

Query: 696 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
            T  VQ G ++++V K ++  + ++ +K A  P
Sbjct: 652 YT--VQLGILKMKVNKADLELVKHAPQKKAEPP 682


>gi|56964440|ref|YP_176171.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           clausii KSM-K16]
 gi|81678829|sp|Q5WEK0.1|MUTS2_BACSK RecName: Full=MutS2 protein
 gi|56910683|dbj|BAD65210.1| MutS family DNA mismatch repair protein [Bacillus clausii KSM-K16]
          Length = 787

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 213/713 (29%), Positives = 354/713 (49%), Gaps = 62/713 (8%)

Query: 16  SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           SLEE + L ++T+ A  +++ +  + L  I D+   +  A  G +LS +E+  +  TL  
Sbjct: 38  SLEEVRHLQDETAEAANVLRLKGHVPLGGISDVRPHIKRAAIGGVLSATELIEIASTLYG 97

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
              V K+  E    DG       P+L   ++    L+ +E+ I  CID    + LD AS 
Sbjct: 98  GKRV-KQFIETIIEDG---HIEVPILAGHVEQIEPLSPIEKAIKQCIDDNGYV-LDSAST 152

Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
            L  +R + +     + S L ++         +   ++T R  R  + +K  ++     G
Sbjct: 153 SLRTVRHQIRSYESGIKSKLDQLTRSSNTRKMLSDAIVTIRSDRYVLPVKQEYRGTF-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + SSSGAT F+EP   V  NN        E  E   IL  L+A++A+   ++   +D
Sbjct: 212 IVHDQSSSGATLFIEPAAIVTLNNQLTEAKAKEKREIERILRELSAKVAEESEQLLLNVD 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
           ++ ++D   A+A +A+ +  V P L+ + ++    +      +HPLL             
Sbjct: 272 KLAQLDFICAKAYYAKAVKAVKPTLNDRGYLDLRQA------RHPLL------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
              P                    D  VP D+ +  + R +VITGPNTGGKT ++KT+GL
Sbjct: 313 ---P-------------------PDKVVPSDMAIGDQVRSLVITGPNTGGKTVTLKTIGL 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
            +LM+++GL++PA     L  F+ I ADIGD QS+EQ+LSTFS H+  IV IL  ++  S
Sbjct: 351 LTLMAQSGLFVPAAEETELAVFEHIFADIGDEQSIEQSLSTFSSHMKNIVSILNEMNENS 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           L+L DE+G+GTDP+EG ALA SIL ++  R  LAV TTHY++L           NA+ EF
Sbjct: 411 LILFDELGAGTDPTEGAALAISILDHVYKRGALAVATTHYSELKGYAYNREGALNASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            +ETLRPTYR+L G  G SNA  I++ +G D +II +A     +L+ +    +  ++  S
Sbjct: 471 DVETLRPTYRLLVGVPGRSNAFAISRRLGLDERIIDQA-----KLQIDSDASQVEKMIAS 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L + ++  +S+   A ++  E   L R++E      +        K  Q+ ++ +  A+ 
Sbjct: 526 LEDSQKSAQSEWSRAEAVRREAEALKRDLEKRMASFEEMKEAALQKAEQKAEKVVAAAQE 585

Query: 614 QIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
             + ++ +  +  +   A + + LI   K+ E A   +V   R        +   +   P
Sbjct: 586 NAELIISELRDLQKQGVAVKEHQLIEARKQLEEAAPKLVSKKRKQVK---KQAEKAKRLP 642

Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           + G++V V S   K  TVV+  GD++   VQ G M++ V  ++I+ +   +R+
Sbjct: 643 EPGDEVKVLSFNQK-GTVVKKIGDNE-YQVQLGIMKMAVPIDDIQLLEQERRQ 693


>gi|379724074|ref|YP_005316205.1| recombination and DNA strand exchange inhibitor protein
           [Paenibacillus mucilaginosus 3016]
 gi|378572746|gb|AFC33056.1| recombination and DNA strand exchange inhibitor protein
           [Paenibacillus mucilaginosus 3016]
          Length = 794

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 205/693 (29%), Positives = 351/693 (50%), Gaps = 73/693 (10%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           I DI   L+ A  G +L+P+E+  +  T +    + + L        +S+    P+  L+
Sbjct: 74  IRDIRPALHRARIGGMLNPAELLDIALTSQGGRRLQRFL--------ESINEDYPVPLLV 125

Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
           ++   +T+   LE++I  CID    ++ D AS +L  IR+E +    +  E L+ +++  
Sbjct: 126 ESTEPMTDHKALEDRIRQCIDENAHVV-DSASPELARIRSELRGSESKARERLEQMVRTP 184

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           + Q      +   L+T R  R  + +K  ++     G+  + S+SGAT F+EP+  V+ N
Sbjct: 185 SIQKM----LQDNLVTIRNDRYVIPVKQEYRSHF-GGMIHDQSASGATLFIEPEAVVQMN 239

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N    L   E AE   IL +L+A +A++   +   ++ + E+D  FA+AG A+ M    P
Sbjct: 240 NRVRELKLKEEAEVEKILRMLSALVAEAADLLVVNVEILGELDFIFAKAGLARTMKATLP 299

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
           +L+ +  +           +HPL+          AS N                      
Sbjct: 300 LLNDRGFIKLKRG------RHPLI----------ASENV--------------------- 322

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
               VP+D+++  +   +++TGPNTGGKT S+KT+GL SLM+ +G+++PA+   +L  FD
Sbjct: 323 ----VPLDVELGGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFD 378

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            I ADIGD QS+EQNLSTFS H++ I+ IL  ++ +SLVL+DE+G+GTDP+EG ALA SI
Sbjct: 379 AIYADIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISI 438

Query: 457 LQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           L Y+  R+G  +V TTHY +L           NA+ EF ++TLRPTYR+L G  G SNA 
Sbjct: 439 LDYMH-RMGCRIVATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAF 497

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            IA+ +G  R II+ A+  V       ++ R   +  +L +   + E++  TA  L  E+
Sbjct: 498 AIAERLGLSRSIIENARGQV-----GEEEQRVESMIATLEQNTIQAEAERATAQELRREV 552

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
             L  ++  E    + +   L  K  ++ ++ +  A+ + + V+ +     R+ +    +
Sbjct: 553 ETLREKLNAERHRFEEQRDKLLEKAEREGREAVAKARREAEEVIAELRRLQREEAGGVKD 612

Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
             + E +  +       R      + +    +  P  G++V V +LG +   V  V   +
Sbjct: 613 HKLSELKKKLNDAAPELRSKQVSQLPKKKPETIGP--GDEVLVTNLGQRGHVVDVVNAQE 670

Query: 696 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
            T  VQ G ++++V K ++  +  + +K A  P
Sbjct: 671 YT--VQLGILKMKVNKADLELVKQAPQKKAEPP 701


>gi|304436503|ref|ZP_07396477.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304370549|gb|EFM24200.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 785

 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 232/710 (32%), Positives = 352/710 (49%), Gaps = 101/710 (14%)

Query: 22  KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT---LRAVNNV 78
           +L  +T  A+ + Q QP     I  +  IL  A  G LL   E+  V+ T   +R V   
Sbjct: 45  RLQRETEEAVRVAQIQPPPFDGIHHLQEILKRAGRGILLELDELRLVKSTIGGMRDVKCF 104

Query: 79  WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
           ++ L+  AEL  D L R   +L +L+  N    ++E   F  D     +L R + +L   
Sbjct: 105 FRDLSADAELLKD-LARRIEILGMLER-NLKAAIDEYGNFRDDAS--PVLRRITNEL--- 157

Query: 139 RAERKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
           R  + R  E L S+L   A Q +FQ     + ++T R  R  + +K  ++   P G+  +
Sbjct: 158 RTAQSRVKERLSSILHDAAYQKMFQ-----EAIVTVRDERYVIPVKQEYRSQFP-GVIHD 211

Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
            S+SGAT F+EP   VE NN   ++  +   E   I+  LT EIA+S   +      + +
Sbjct: 212 QSASGATLFIEPLAIVELNNTVRQMGIAREQEILRIMQRLTGEIARSADVLSANCTILSD 271

Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
           +DL FARA  A+ M    PIL+       D  +++   +HPLL                P
Sbjct: 272 LDLIFARASLAREMSAYPPILNR------DGYVHLRRARHPLL----------------P 309

Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
                               D  VPIDI++      ++ITGPNTGGKT SMKTLG+ +LM
Sbjct: 310 -------------------PDKVVPIDIELGKTFSTLLITGPNTGGKTVSMKTLGILALM 350

Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
           S++G +LPA++   +P +  I ADIGD QS+EQ+LSTFS H   IV I++  +   LVL+
Sbjct: 351 SQSGCFLPAESGSEIPIYQNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDRATFGDLVLL 410

Query: 438 DEIGSGTDPSEGVALATSILQ-YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
           DE+G+GTDP EG ALA SI++ +L +R+   V TTHYADL          ENA+ EF L+
Sbjct: 411 DEVGAGTDPDEGAALARSIIEHFLMNRIA-TVATTHYADLKTYAYTQQGVENASVEFDLK 469

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
           TLRPTYR+L G  G SNA +I++ +G   +I+ RA++ V  +  + E   H   E  +++
Sbjct: 470 TLRPTYRLLIGIPGASNAFSISRQLGLPEEIVARAEEYVSEDHAQFETVVH-DLERAKTI 528

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
            EE+ +L                LY++  D  +   R  A   A E Q  Q+ L+ A+ +
Sbjct: 529 YEEKNQL----------------LYKKETDVGRAESRLRAERAAFE-QSKQELLHKAREE 571

Query: 615 IDTVVQDFENQLRDASADEINSL--------IKESESAIAAIVEAHRPDDDFSVSETNTS 666
            + +V+    + R ++ + I SL        IKE + AI A           ++S    +
Sbjct: 572 ANNIVR----EARRSAEETIQSLKEQFDDHGIKERQKAIQAARSRLNEAYVHNISPKIPA 627

Query: 667 SFTP------QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
              P      Q G+ V++++L  +  TV+ V G +  + VQ G +R  VK
Sbjct: 628 EGRPVRPGEIQSGDTVYIRTLAQE-GTVLSVQGKE--LSVQVGGLRTMVK 674


>gi|331269166|ref|YP_004395658.1| MutS2 family protein [Clostridium botulinum BKT015925]
 gi|329125716|gb|AEB75661.1| MutS2 family protein [Clostridium botulinum BKT015925]
          Length = 785

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 212/647 (32%), Positives = 323/647 (49%), Gaps = 84/647 (12%)

Query: 91  DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
           D  ++Y+ L  + +    L+ LEE+I  CI  +  +  DRAS  L  IR   K    ++ 
Sbjct: 110 DENEKYTVLESITEGIVPLSGLEEEIFKCIIGEDEL-SDRASTTLFNIRRSLKDKTSSIK 168

Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
           S +  +     Q   + + + T R  R  + +K  HK  +P G+  + SSSGAT F+EP 
Sbjct: 169 SRVNSLIRTYSQH--LQENIYTVRGERYVLPVKVEHKGAVP-GLVHDQSSSGATLFIEPM 225

Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
             V+ NN    L   E  E   IL++L+ ++  +   IK   D + E+D  FA+A +A  
Sbjct: 226 SLVDLNNEIKELRLKERDEIERILTVLSGKVYDNIDVIKVNADILWELDFIFAKAKYAAK 285

Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
           +D +CP +S   H       NI   KHPL+                  K  VEN+     
Sbjct: 286 LDAICPTISEDGH------FNIIRAKHPLI----------------DTKKVVENNIY--- 320

Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
            L +GI+                +VITGPNTGGKT ++KT+GL  +M+ +GL + A    
Sbjct: 321 -LREGITS---------------LVITGPNTGGKTVTLKTVGLMHIMAMSGLMITAAQGS 364

Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
            + +F  + ADIGD QS+EQ+LSTFS H++ IV+I++     SLVL DE+G+GTDP+EG 
Sbjct: 365 TISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDNADENSLVLFDELGAGTDPTEGA 424

Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
           ALA SIL+ LR+R    + TTHY++L     K  R ENA+ EF +ETLRPTYR+L G  G
Sbjct: 425 ALAVSILENLRERNTKVIATTHYSELKAYALKVDRVENASVEFDVETLRPTYRLLIGVPG 484

Query: 511 DSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTA 568
            SNA  I+K +G    II+ A+K +  E L+ E       +L QSL  +  K +  AR A
Sbjct: 485 KSNAFEISKRLGLPDYIIEDAKKGIDEETLKFE-------DLIQSLQHKNIKAQEHAREA 537

Query: 569 ASLHAEIMDLYREIE---DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
                E + L  + E   D+ KD+  +A     KE +++ +E   AK + D +++D    
Sbjct: 538 EGAREEAVKLKEKYENKLDKFKDIREKAILNAQKEAKEIIKE---AKEESDKILKDIREL 594

Query: 626 LRDASADEINSLIKESESAIAAIV-----------EAHRPDDDFSVSETNTSSFTPQFGE 674
            R   + ++  L++E+   +   +           E   P D   V+E +   + P+F  
Sbjct: 595 ERMGYSSDVRKLLEENRKKLKEKLEKTEEKLNKPKEIGEPID--KVAEGD-EVYLPKFDT 651

Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           +V           V+  P     V VQ G M+++V   ++R    +K
Sbjct: 652 KV----------MVLTNPDSKGDVQVQAGIMKIKVNIKDLRKTKETK 688


>gi|337751036|ref|YP_004645198.1| recombination and DNA strand exchange inhibitor protein
           [Paenibacillus mucilaginosus KNP414]
 gi|336302225|gb|AEI45328.1| recombination and DNA strand exchange inhibitor protein
           [Paenibacillus mucilaginosus KNP414]
          Length = 794

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 205/693 (29%), Positives = 351/693 (50%), Gaps = 73/693 (10%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           I DI   L+ A  G +L+P+E+  +  T +    + + L        +S+    P+  L+
Sbjct: 74  IRDIRPALHRARIGGMLNPAELLDIALTSQGGRRLQRFL--------ESINEDYPVPLLV 125

Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
           ++   +T+   LE++I  CID    ++ D AS +L  IR+E +    +  E L+ +++  
Sbjct: 126 ESTEPMTDHKALEDRIRQCIDENAHVV-DSASPELARIRSELRGSESKARERLEQMVRTP 184

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           + Q      +   L+T R  R  + +K  ++     G+  + S+SGAT F+EP+  V+ N
Sbjct: 185 SIQKM----LQDNLVTIRNDRYVIPVKQEYRSHF-GGMIHDQSASGATLFIEPEAVVQMN 239

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N    L   E AE   IL +L+A +A++   +   ++ + E+D  FA+AG A+ M    P
Sbjct: 240 NRVRELKLKEEAEVEKILRMLSALVAEAADLLVVNVEILGELDFIFAKAGLARTMKATLP 299

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
           +L+ +  +           +HPL+          AS N                      
Sbjct: 300 LLNDRGFIKLKRG------RHPLI----------ASENV--------------------- 322

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
               VP+D+++  +   +++TGPNTGGKT S+KT+GL SLM+ +G+++PA+   +L  FD
Sbjct: 323 ----VPLDVELGGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFD 378

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            I ADIGD QS+EQNLSTFS H++ I+ IL  ++ +SLVL+DE+G+GTDP+EG ALA SI
Sbjct: 379 AIYADIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISI 438

Query: 457 LQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           L Y+  R+G  +V TTHY +L           NA+ EF ++TLRPTYR+L G  G SNA 
Sbjct: 439 LDYMH-RMGCRIVATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAF 497

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            IA+ +G  R II+ A+  V       ++ R   +  +L +   + E++  TA  L  E+
Sbjct: 498 AIAERLGLSRSIIENARGQV-----GEEEQRVESMIATLEQNTIQAEAERATAQELRREV 552

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
             L  ++  E    + +   L  K  ++ ++ +  A+ + + V+ +     R+ +    +
Sbjct: 553 ETLREKLNAERHRFEEQRDKLLEKAEREGREAVAKARREAEEVIAELRRLQREEAGGVKD 612

Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
             + E +  +       R      + +    +  P  G++V V +LG +   V  V   +
Sbjct: 613 HKLSELKKKLNDAAPELRSKQVSQLPKKKPETIGP--GDEVLVTNLGQRGHIVDVVNAQE 670

Query: 696 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
            T  VQ G ++++V K ++  +  + +K A  P
Sbjct: 671 YT--VQLGILKMKVNKADLELVKQAPQKKAEPP 701


>gi|258515602|ref|YP_003191824.1| MutS2 family protein [Desulfotomaculum acetoxidans DSM 771]
 gi|257779307|gb|ACV63201.1| MutS2 family protein [Desulfotomaculum acetoxidans DSM 771]
          Length = 786

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 210/715 (29%), Positives = 344/715 (48%), Gaps = 82/715 (11%)

Query: 24  LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           L++T+ A  M + +P  D+    DI   +  A  G +L   ++  +  TL A       L
Sbjct: 48  LSETTEAREMFRLEPAADIGGWHDIRKSVIRAHQGAVLEAKDLSEIGETLAAARLARNYL 107

Query: 83  TEAAELDGDSLQRYSPLLELLKN-CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
            E  E        + PLL  + +      +LE ++   I      I DRAS+ L  IR  
Sbjct: 108 LERDE--------FYPLLAGIGSRITSFADLEHRLKNAI-LPGGEIADRASDALSQIRRR 158

Query: 142 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 201
              N  ++   L+ +         +  P++T R  R  V +K  ++  +  GI  + S+S
Sbjct: 159 ITNNRASVKERLEHIIRSPNYQKYLQDPIVTIREGRYVVPVKLEYRGQV-QGIVHDTSAS 217

Query: 202 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 261
           GAT F+EP   VE NN   RL  +E  E   IL+ L+  +A+    +   ++ +  +D  
Sbjct: 218 GATLFVEPMAVVEANNELRRLIAAEKQEIVKILTDLSCRVAQESEPLGVTLEALGHLDFV 277

Query: 262 FARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 321
            A+A  +  MD   P+L           +NI+  +HPLL G                  D
Sbjct: 278 LAKARLSSQMDAWAPVLVD------GPVVNIQKGRHPLLAG------------------D 313

Query: 322 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 381
           V                  VP+ + +  E   ++ITGPNTGGKT ++KT+GL  LM+++G
Sbjct: 314 V------------------VPVSVHLGKEFDSLIITGPNTGGKTVTLKTIGLLVLMAQSG 355

Query: 382 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIG 441
           L++PA++      F+ + ADIGD QS+EQ+LSTFS H+S IV IL      SLVL+DE+G
Sbjct: 356 LHIPAESSSETGIFEQVFADIGDEQSIEQSLSTFSSHMSNIVSILNQSGAGSLVLMDELG 415

Query: 442 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 501
           +GTDP+EG ALA +IL+ L ++    V TTHY++L        R ENA+ EF   +L+PT
Sbjct: 416 AGTDPTEGAALAQAILEKLHEQKAKIVATTHYSELKNFAYAHRRVENASVEFDPISLKPT 475

Query: 502 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 561
           YR+L G  G SNA  IA  +G +  ++ RA+  +       +Q   SEL   L +ER+  
Sbjct: 476 YRLLIGKPGRSNAFEIALRLGLEPGVVSRARDFL-----TTEQIEISELMLRLEKERQAA 530

Query: 562 ESQART-------AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
           E + R        A  L A   +L + + ++ +D+  +A    +K  +  +QE   A  +
Sbjct: 531 EEEKRIAELLRQDAEKLKARYTELEQMLREKREDILAKAHEEASKTVKNTRQEAEEAIKE 590

Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ--- 671
              ++Q+ +N+L++ +  E+ + IK  +  +                E +     P+   
Sbjct: 591 FRGMLQENDNRLKEMAVQEVRNKIKGMQGRLR------------KAPEKSHGGVVPRELL 638

Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
            GE+V + +L ++   V+ V  D    LVQ G M++ +   ++R +  +K++N+ 
Sbjct: 639 IGEEVFIPNL-NQQGYVLNVSTDGKEALVQVGIMKLNMPVKDLRKVDEAKKENSG 692


>gi|339442882|ref|YP_004708887.1| MutS-like ATPase involved in mismatch repair, family 1 [Clostridium
           sp. SY8519]
 gi|338902283|dbj|BAK47785.1| MutS-like ATPase involved in mismatch repair, family 1 [Clostridium
           sp. SY8519]
          Length = 792

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 226/705 (32%), Positives = 354/705 (50%), Gaps = 86/705 (12%)

Query: 26  QTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR--AVNNVWKKL 82
           +T+ A A +++S  L  S +++    +     G +L+ +E+ AV R LR  A    + K 
Sbjct: 49  ETADAFARLLKSGKLTFSGLKNPKASMKRLEIGGVLNTAELLAVSRLLRIAAKAKAYGK- 107

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
            E  +L  DSLQ      EL      +  L E+I  CI  +  I  D AS  L  IR   
Sbjct: 108 PEREDLPTDSLQ------ELFDRLEPVPGLAEEIDRCILAEDEIS-DDASPKLRQIRRTI 160

Query: 143 KRNMENLDSLLKKV----AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
               E + S L ++    A +I+    +  P++T R  R C+ +KA +K  +P G+  + 
Sbjct: 161 NGMSERIHSALNRIVNSSAGRIY----LQDPIVTMRSGRYCLPVKAEYKAQIP-GMVHDQ 215

Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEET-AILSLLTAEIAKSEREIK--YLMDRV 255
           SSSG T F+EP   V+ NN E+R +  + AEE   IL+ L+++ A+   +I+  ++  R+
Sbjct: 216 SSSGNTLFIEPVSVVKLNN-ELRETYLKEAEEIDVILARLSSDTAEYSAQIQEDFITCRL 274

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
           L  D  FA+  +AQ ++G+ P+ +++        I I   +HPLL               
Sbjct: 275 L--DFIFAKGRYAQAINGMAPVFNTEG------IIRIRRGRHPLL--------------- 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
           +P K                     VPID+ +  +  V+V+TGPNTGGKT S+KT+GL +
Sbjct: 312 DPKKV--------------------VPIDVSLGEDYHVLVVTGPNTGGKTVSLKTVGLLT 351

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM +AG+++PA +  +L  FD + ADIGD QS+EQ+LSTFS HI+ +V I   ++  SLV
Sbjct: 352 LMGQAGMHIPAADRSQLAVFDEVFADIGDEQSIEQSLSTFSSHITNMVSIFRQMNPNSLV 411

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DE+ +GTDP+EG ALA SIL  LR R    + TTHY+++          ENA+ EF +
Sbjct: 412 LFDELCAGTDPNEGAALAISILDDLRSRGIRTMATTHYSEMKIYALSTEGVENASCEFDV 471

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
           ETL PTYR++ G  G SNA  I++ +G    +I  A+   +RL  E +     ++   L 
Sbjct: 472 ETLSPTYRLVTGVPGKSNAFAISQRLGLPESLIDGAR---QRLSQEAESF--EDVIADLE 526

Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
           + R  +E + +  A    EI  +  E+ +    L+ R   L A+  ++  Q L  AK   
Sbjct: 527 QSRHTIEQEQQQIARYKTEIETMKEELAESRNKLEARRDKLIAEANEEAAQILREAKEVA 586

Query: 616 DTVVQDFENQLR---DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
           D  ++ F    +   DA+A E     K+ E     + +A+R        +        + 
Sbjct: 587 DDTIRKFRKYGKNGLDAAAME-----KDREKVRKQLDKANRNAVQKKKQKIENHQVPKKL 641

Query: 673 --GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
             G+ V V S+  K  TV  +P +   ++VQ G +R +V   NIR
Sbjct: 642 MIGDSVKVLSMNLK-GTVHTLPNEKGDLMVQMGILRYKV---NIR 682


>gi|334127861|ref|ZP_08501763.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
 gi|333388582|gb|EGK59756.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
          Length = 784

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 217/713 (30%), Positives = 340/713 (47%), Gaps = 75/713 (10%)

Query: 22  KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           +L  +T+ A+ ++Q Q      I D+  I+  A  G +L   E+ +V  T+  + NV K 
Sbjct: 45  RLHQETAEAVQVLQMQTPPFGGIYDLRQIMKKASMGSVLEVDELRSVMSTMAGMRNV-KY 103

Query: 82  LTEAAELDGDSLQRYSPLLELLKNC--NFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
                ++D   L+  +  LE+L     +    ++E   F  D      L R + +L+  +
Sbjct: 104 FFRDLDIDVSILKEQARPLEILGMVERHLKDAIDEHGNFRDDASPE--LRRITRELQTAQ 161

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
           A   R  + L ++L   A Q +      + ++T R  R  + +K  ++   P G+  + S
Sbjct: 162 A---RAKDRLSAILHDAANQKY----FQEAIVTVRDERYVIPVKQEYRNYFP-GVIHDQS 213

Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
           +SGAT F+EP   VE NN   ++  +   E   IL  LTAEIA++ R ++     +  ID
Sbjct: 214 ASGATLFVEPLATVELNNTVRQMELARTQEIQRILRKLTAEIAQNARILEENCAILSTID 273

Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
           L FARA  A+ M+   P L+    V    +      +HPLL                P  
Sbjct: 274 LIFARARLAREMEAYPPTLNRNGRVHLKRA------RHPLL----------------P-- 309

Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
                             D  VPIDI++     V++ITGPNTGGKT SMKTLGL +L+++
Sbjct: 310 -----------------RDKVVPIDIELGKSFSVLLITGPNTGGKTVSMKTLGLLALLAQ 352

Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
            G +LP      +P +  I ADIGD QS+EQ+LSTFS H   IV I++   +  L+L+DE
Sbjct: 353 TGCFLPTAPDSEIPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDKAEQGDLILLDE 412

Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
           +G+GTDP EG ALA SI+++   R    V TTHYA L       T  ENA+ EF L+TLR
Sbjct: 413 VGAGTDPDEGAALARSIIEHFLRRNICTVATTHYAALKTFAYTQTGVENASVEFDLKTLR 472

Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 559
           PTYR+L G  G SNA +I++ +G    I+ RA+  +     E   H ++ +   L +E++
Sbjct: 473 PTYRLLIGIPGASNAFSISRQLGLSPDIVARAEIYIS----EEHTHFEN-VVNELEQEKK 527

Query: 560 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 619
             E++     +  AE+      +  E     +    L  K  ++    +  A+   +  +
Sbjct: 528 DYEARNHMLHAKEAELTAREARLCTERDTFTKMRQELLHKACEEANNIVRMARRSAEETI 587

Query: 620 QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP------QFG 673
           +  + Q  D    E    I+E+   +    EA+   D    ++ N S   P      Q G
Sbjct: 588 KSLKEQFDDHGVKERRKAIQEARDRLN---EAYVEGD----AQRNESVGKPVRAGEVQSG 640

Query: 674 EQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
           + V++ SL  +  TV+ + G + T  VQ G +R  VK N  R +   K++ A 
Sbjct: 641 DIVYIPSLAQE-GTVLAIQGKELT--VQVGGLRTIVKMNACRFVARKKKQRAG 690


>gi|269837731|ref|YP_003319959.1| MutS2 family protein [Sphaerobacter thermophilus DSM 20745]
 gi|269786994|gb|ACZ39137.1| MutS2 family protein [Sphaerobacter thermophilus DSM 20745]
          Length = 800

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 183/523 (34%), Positives = 273/523 (52%), Gaps = 61/523 (11%)

Query: 23  LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK- 80
           LL  T  A+ ++ + P   +  + DI  ++  A  G LLS  ++     T++A   + + 
Sbjct: 46  LLAVTREAVTLLTTYPSFTVGGVRDIRPLVERARRGSLLSAGDLRDALDTIQAARELRRT 105

Query: 81  --KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
             K+ +A EL       Y  L E ++    L  LE  +G  +  +  I LD ASE L  I
Sbjct: 106 FFKIPDANEL-------YPNLSEFVEAIADLAGLEADLGRTVGPRGEI-LDTASERLAEI 157

Query: 139 RAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
           R E     +R ++ L+ +L   A     AG I   ++T R  R  + ++A  +  +P G+
Sbjct: 158 RREVRIAHRRLLDRLNRMLTDAA----YAGAIQDAIVTMREGRYVIPVRADRRAQIP-GV 212

Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
               S+SG T F+EP   VE NN    L  +E  E  AIL   + +IA +  ++   ++ 
Sbjct: 213 VHATSASGQTLFVEPMAVVELNNRWRELQMAEEHEIEAILRARSDQIAAAADDLDQTVEA 272

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS-----INIEGIKHPLLLGSSLRSLS 309
           V  IDLA A+A  A  M  V PIL   S            I++   +HPLL         
Sbjct: 273 VAAIDLALAKARLAFSMRAVEPILVEASGPGAPGGHPRHRIDLRQARHPLL--------- 323

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                 +P                    D  VPID+++    R++V+TGPNTGGKT ++K
Sbjct: 324 ------DP--------------------DTVVPIDVRIGETYRILVVTGPNTGGKTVALK 357

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+GL +LM++ GL++PA +   L  F  + ADIGD QS+EQ+LSTFS H+++I+ +L   
Sbjct: 358 TVGLLTLMAQTGLFIPAADGSALSVFSAVYADIGDEQSIEQSLSTFSAHVTKIIAMLRSA 417

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
             +SLVL+DEIG+GTDP EG ALA +I+  L +R  +A+VTTHY++L          ENA
Sbjct: 418 DADSLVLLDEIGAGTDPQEGSALARAIISALLERGVIAMVTTHYSELKAFAYVTEGTENA 477

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
           + EF L  L PTYR+L G  G SNAL IA+ +G  R++I+ A+
Sbjct: 478 SVEFDLRNLSPTYRLLLGVAGQSNALAIAERLGMPREVIEAAR 520


>gi|160878313|ref|YP_001557281.1| MutS2 family protein [Clostridium phytofermentans ISDg]
 gi|229486372|sp|A9KR74.1|MUTS2_CLOPH RecName: Full=MutS2 protein
 gi|160426979|gb|ABX40542.1| MutS2 family protein [Clostridium phytofermentans ISDg]
          Length = 796

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 234/710 (32%), Positives = 342/710 (48%), Gaps = 89/710 (12%)

Query: 17  LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGIL------NSAVSGQLLSPSEICAVR 69
           LE+  ++  +T+ AL  + ++  L  S I DI   L       S  +G+LL  S +    
Sbjct: 40  LEDIVQMQQETTDALTRLYAKGTLSFSGIPDIRDTLMRLEIGASLGAGELLKISSVLTA- 98

Query: 70  RTLRAVNNVW--KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
            TLRA N  +  K   E  E   D+L     LLE L   N       +I  CI  +  I 
Sbjct: 99  -TLRAKNYGYNQKNNEETEEAAQDTLTERFHLLEPLSPIN------NEIRRCIISEEEIA 151

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
            D AS  L+ +R + K   + +   L  +       G +   +IT R  R C+ IK  +K
Sbjct: 152 -DDASPGLKSVRRQIKITNDKIHESLGSILNSASTKGMLQDAIITMRNGRYCLPIKQEYK 210

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
                G+  + SS+G+T F+EP   V+ NN    L+  E  E   IL+ L+  +A  +  
Sbjct: 211 NTF-QGMMHDQSSTGSTAFIEPMAIVKLNNELAELAVREQEEIEKILAELSNLVATEKYN 269

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           +KY    + E+D  FARAG ++ M       +SQ H +    INI+  +HPL+       
Sbjct: 270 LKYNQTTLAELDFIFARAGLSKNMK------ASQPHFNNRHYINIKKGRHPLI------- 316

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                   +P K                     VPIDI    +  ++VITGPNTGGKT S
Sbjct: 317 --------DPKKV--------------------VPIDIYFGDKFDLLVITGPNTGGKTVS 348

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL +LM +AGL++PA +   L  F+ + ADIGD QS+EQ+LSTFS H++  V ILE
Sbjct: 349 LKTVGLFTLMGQAGLHIPAFDGSELSIFEEVYADIGDEQSIEQSLSTFSSHMTNTVSILE 408

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
             +  SLVL DE+G+GTDP+EG ALA +IL YL  R    + TTHY++L           
Sbjct: 409 HANENSLVLFDELGAGTDPTEGAALAMAILSYLHQRKIRTMATTHYSELKIFALSTDGVS 468

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NA  EFS+ETL+PTYR+L G  G SNA  I+  +G    II++A++ +       +    
Sbjct: 469 NACCEFSVETLQPTYRLLIGIPGKSNAFAISSKLGLSNYIIEKAREFI-----GTKDESF 523

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIE------DEAKDLDRRAAHLKAKET 601
            ++  +L   R  +E     A     E+ +L R++       D+AKD   R A+ KA+  
Sbjct: 524 EDVISNLEASRIAMEKDKAEAEQYKKEVEELKRKLAEKNSKIDDAKDRILREANEKAR-- 581

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
             + QE   AK   D  ++ + N+     A+      KE E+  AA+ E     D   VS
Sbjct: 582 -TILQE---AKDYADETIRKY-NKWGAGGANN-----KEMENERAALREKLGDTDSSLVS 631

Query: 662 ET--NTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
           +   N     P   + G+ VHV SL  K  +V  +P     + VQ G +R
Sbjct: 632 KAKKNRKQHKPSDFKVGDSVHVISLNLK-GSVSTLPNAKGDLYVQMGILR 680


>gi|374296809|ref|YP_005047000.1| MutS2 family protein [Clostridium clariflavum DSM 19732]
 gi|359826303|gb|AEV69076.1| MutS2 family protein [Clostridium clariflavum DSM 19732]
          Length = 793

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 215/699 (30%), Positives = 342/699 (48%), Gaps = 82/699 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +L+P E+  +   LRAV N+ K  + +A +          L+
Sbjct: 65  LGGIHDIRDSVRRAEIGSMLNPGELMRIANVLRAVRNL-KNYSNSANVKEGEDNIVGELI 123

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
           E L+       +E+KI  CI  +  I  D AS  L  IR + +    ++   L ++    
Sbjct: 124 ECLEAAK---RIEDKINLCIVSEEEI-SDNASPALGSIRRQIRHAQNSIKDKLNELIRSP 179

Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
                + +P++T R  R  + +K  ++  +P G+  + S+SGAT F+EP   VE NN   
Sbjct: 180 KYQKYMQEPIVTMRGERYVIPVKQEYRTEVP-GLIHDSSASGATLFIEPMAVVEANNAIR 238

Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSS 280
            L   E AE   IL  L+ ++A+   E+   ++ + ++D  FA+A  +   + VCP L++
Sbjct: 239 ELKIKEEAEIERILRELSCDVAEIAVELNTNINLLAKLDFIFAKAKLSLEYNCVCPKLNN 298

Query: 281 QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFP 340
           +  +           +HPLL+  ++                                   
Sbjct: 299 EGKIIIKKG------RHPLLVPKTV----------------------------------- 317

Query: 341 VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILA 400
           VPID  +  +   +V+TGPNTGGKT ++KT+GL +LM++AGL++PA     L  F+ + A
Sbjct: 318 VPIDFWIGEDFHTLVVTGPNTGGKTVTLKTVGLFTLMAQAGLHIPAGEGTVLSVFNKVFA 377

Query: 401 DIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYL 460
           DIGD QS+EQ+LSTFS H+  IV+ILE +   +LVL DE+G+GTDP+EG ALA +IL++L
Sbjct: 378 DIGDEQSIEQSLSTFSSHMKNIVNILENIDDRTLVLFDELGAGTDPTEGAALAMAILEHL 437

Query: 461 RDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKS 520
           +DR    V TTHY+ L          ENA  EF +ETL+PTY++L G  G SNA  I+K 
Sbjct: 438 KDRGCTVVATTHYSQLKVYAVTTPYVENACCEFDVETLKPTYKLLIGVPGRSNAFAISKR 497

Query: 521 IGFDRKIIQRAQKLV--ERLRPE----------RQQHRKSELYQSLMEERRKLESQ-ART 567
           +G    +I+RA+  +  E ++ E           Q   +    Q L +E  K++S+    
Sbjct: 498 LGLTDSVIERAKSYLTSEEIKFEDMLLNIEKNLNQSENEKLQAQLLKQEAEKIKSEMENE 557

Query: 568 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 627
              L  +   + RE  +EA+ L   A H    E   +  E+   ++Q     ++ EN   
Sbjct: 558 KRKLEEKKEKILREAREEARKLLLNAKH----EADNILSEMR--RIQ-----KERENIQS 606

Query: 628 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDK 684
             +A+E+   +K   S I  I +A       SV   NT    P+    G+ V + +L  +
Sbjct: 607 QKAAEEMRLKLK---SNIDTIEDALSK----SVMPKNTLVKPPKNLKPGDSVLIVNLNQR 659

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
             TV+  P  D   +VQ G M++ V   N++ +   K +
Sbjct: 660 -GTVITPPDRDGEAIVQVGIMKINVHITNLKLVDEQKEQ 697


>gi|225574101|ref|ZP_03782712.1| hypothetical protein RUMHYD_02166 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038701|gb|EEG48947.1| MutS2 family protein [Blautia hydrogenotrophica DSM 10507]
          Length = 793

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 202/633 (31%), Positives = 309/633 (48%), Gaps = 79/633 (12%)

Query: 8   KAQIPFGKSL----------EESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVS 56
           KA  P GK+L          E+ Q +  QT  AL+ + Q   L    ++DI G +     
Sbjct: 21  KASSPMGKNLCKDLKPCRDLEQIQTMQTQTKDALSRLFQKGTLSFHKVKDIRGSIKRLEI 80

Query: 57  GQLLSPSE---ICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELE 113
           G  L   E   IC+V        +  +   E    D         L  + +N   LT L 
Sbjct: 81  GSTLGIGELLDICSVLENTAKAKSYGRFDRETETCDS--------LDAMFQNLEPLTPLS 132

Query: 114 EKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKP 169
            +I  CI  +  I  D AS  L+ +R   K    R    L+SLL   A    Q G     
Sbjct: 133 SEIRRCILSEEEIS-DDASPGLKQVRRSMKITNDRIHSQLNSLLNGSARSYLQDG----- 186

Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
           +IT R  R C+ +KA +K  +P G+  + SS+G+T F+EP   V+ NN   +L   E  E
Sbjct: 187 VITMRNGRYCLPVKAEYKGQVP-GMIHDQSSTGSTLFIEPMSVVKLNNDLRQLEIQEQKE 245

Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
              +LS L+ + A+ +  +   ++ ++E+D  FARAG A   +      +S+   + D  
Sbjct: 246 IEIVLSDLSEQAAQYQEVLTDNLNILIELDFIFARAGLALEHN------ASEPQFNTDGK 299

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
           I ++  +HPL+    +                                   VPIDI++  
Sbjct: 300 IQLKKARHPLIHKKQV-----------------------------------VPIDIRLGD 324

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
           +  ++V+TGPNTGGKT S+KT+GL +LM ++GL++PA +H  L  F+ + ADIGD QS+E
Sbjct: 325 DFDLLVVTGPNTGGKTVSLKTVGLLTLMGQSGLHIPAGDHSVLSVFEEVYADIGDEQSIE 384

Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
           Q+LSTFS H++ +V  LE  + +SLVL DE+G+GTDP+EG ALA +IL +L  +    + 
Sbjct: 385 QSLSTFSSHMTNVVSFLEKATDKSLVLFDELGAGTDPTEGAALAIAILSHLHRQGIRTMA 444

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTHY++L          ENA+ EF +ETLRPTYR+L G  G SNA  I+  +G    II+
Sbjct: 445 TTHYSELKVYALSTPGVENASCEFDVETLRPTYRLLIGVPGKSNAFAISSKLGLPDFIIE 504

Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
           +A++ +       Q     ++   L   R  LE +        AEI  L +++E++ +  
Sbjct: 505 KAKEQI-----SEQDESFEDVISKLEASRITLEKEQLEIQQYKAEIESLKKQLEEKQEKF 559

Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
           D R   +  +  +Q  + L  AK   D  ++ F
Sbjct: 560 DARKEKIIREANEQAHEILREAKEYADQTMKTF 592


>gi|320529025|ref|ZP_08030117.1| putative recombination and DNA strand exchange inhibitor protein
           [Selenomonas artemidis F0399]
 gi|320138655|gb|EFW30545.1| putative recombination and DNA strand exchange inhibitor protein
           [Selenomonas artemidis F0399]
          Length = 785

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 217/714 (30%), Positives = 344/714 (48%), Gaps = 81/714 (11%)

Query: 22  KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           +L  +T+ A++++Q Q      I D+   L  A  G +L   E+  +  T++ + NV K 
Sbjct: 45  RLHAETAEAVSVLQMQSPPFGGIYDLRRTLQKATLGSILEVEELREIMSTMQGMRNV-KY 103

Query: 82  LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
               AEL    L+  S  +E+L        LE+ +   ID +     D AS +L  +  E
Sbjct: 104 FFRDAELSLPLLKEKSVRIEILGM------LEKHLQNTID-EHGNFRDDASPELRRVTRE 156

Query: 142 ----RKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
               + R  E L ++L   A Q  FQ     + ++T R  R  + +K  ++   P G+  
Sbjct: 157 MLSAQNRVKERLSAILHDAAYQKCFQ-----EAIVTVRAERYVIPVKQEYRAQFP-GVIH 210

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP   VE NN   ++  +   E   IL  L+ EIA++   +      + 
Sbjct: 211 DRSASGATLFVEPLATVELNNTVRQMELAREQEIRRILQQLSQEIARAADILSENCTILA 270

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           +IDL FARAG ++ M+   P  +   +V    +      +HPLL                
Sbjct: 271 DIDLIFARAGLSRDMEAYAPTFNRAGYVRLQRA------RHPLL---------------- 308

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
           P                    D  VPIDI++  +  V++ITGPNTGGKT SMKTLG+ +L
Sbjct: 309 P-------------------KDHVVPIDIELGRDFSVLLITGPNTGGKTVSMKTLGILAL 349

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+++G +LP  +   LP +  I ADIGD QS+EQ+LSTFS H   IV IL+    + LVL
Sbjct: 350 MAQSGCFLPTASGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIVRILQKAKSDDLVL 409

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
           +DE+G+GTDP EG ALA SI+++L  R    + TTHYA L           NA+ EF   
Sbjct: 410 LDEVGAGTDPGEGAALARSIIEHLLQRRISVIATTHYAALKTYAYGRQGVMNASVEFDTG 469

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TLRPTYR+L G+ G SNA +I++ +G    I+ RAQ+ ++      + H + E   + +E
Sbjct: 470 TLRPTYRLLIGTPGASNAFSISRRLGLADAIVARAQRYID------EDHVRFETVVNELE 523

Query: 557 ERRKL----ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAK 612
           + +++    +++ RT A   + + +  R   D+     R   H   +E   + +E   A+
Sbjct: 524 QEKRVYETRQTELRTRAQKISAMEEQLRTERDKFIRAHRELLHKAREEANGIVRE---AR 580

Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
              +  ++  + Q  D    E    I+E+      + EA+ P    S ++        + 
Sbjct: 581 RSAEETIKKLKQQFDDHGVKERRKAIQEARE---RLTEAYMPQRHPSAAKVGQKIHAGEI 637

Query: 673 --GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
             G+ VH+  L  +  TV  + G + T  VQ G +R  VK +    +   K+K+
Sbjct: 638 EPGDIVHITRLAQE-GTVFAIQGKELT--VQIGALRTVVKTDECTFVSRKKKKH 688


>gi|150389498|ref|YP_001319547.1| MutS2 family protein [Alkaliphilus metalliredigens QYMF]
 gi|229486330|sp|A6TNX0.1|MUTS2_ALKMQ RecName: Full=MutS2 protein
 gi|149949360|gb|ABR47888.1| MutS2 family protein [Alkaliphilus metalliredigens QYMF]
          Length = 789

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 194/636 (30%), Positives = 317/636 (49%), Gaps = 58/636 (9%)

Query: 15  KSLEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
           +S  E  +L ++TS A +++ Q   + L  I DI   L     G  L P E+  V+ TLR
Sbjct: 38  QSFGEITQLQSETSEAQSILIQRGNIPLGGIHDIKQYLRKTEIGSYLDPKELLLVKDTLR 97

Query: 74  AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRA 131
              N+     E     GD   ++  +  L++       +E++I  CI  D +   I D A
Sbjct: 98  TARNLKSFFKE-----GDDQTKHPIVSGLIQGLQSFRAIEDRIEICIVSDTE---ISDHA 149

Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
           S  L+ IR +     + + + L  +         +   +IT R+ R  V +K  H+  +P
Sbjct: 150 SSTLKNIRRQISSKNDAVRNKLNGIINSSTTQKYLQDAIITMRQDRYVVPVKQEHRGNVP 209

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
            G+  + SSSGAT F+EP   V+ NN    L   E  E   IL  +   IA+   E++  
Sbjct: 210 -GLIHDQSSSGATLFVEPMAVVQLNNELRELKIKEHIEIERILMEIAEMIAQYATEMRNN 268

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
              +  ID  FA+   +  M GV P+L+       + +++I+  +HPLL           
Sbjct: 269 QIILTAIDFVFAKGKLSLEMKGVEPLLN------VEGNVHIKNGRHPLL----------- 311

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
                                    +D  VP ++ +    + +VITGPNTGGKT ++KTL
Sbjct: 312 ------------------------NADEVVPTNLWIGETFQTLVITGPNTGGKTVTLKTL 347

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
           GL S+M+++GL++PA    RL  FD I ADIGD QS+EQ+LSTFS H++ IV+I+E V+ 
Sbjct: 348 GLLSMMAQSGLHVPADYGTRLAIFDQIFADIGDEQSIEQSLSTFSSHMTNIVNIVEEVTS 407

Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
            SLVL DE+G+GTDP+EG AL  +IL +LR+     V TTHY++L      +   ENA+ 
Sbjct: 408 NSLVLFDELGAGTDPTEGAALGMAILNHLREMNVTTVATTHYSELKQYALTNEGVENASV 467

Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
           EF + TL PTYR+L G  G SNA  I+K +G    ++QRA++ + +     +     +L 
Sbjct: 468 EFDVATLSPTYRLLIGVPGKSNAFEISKKLGLPDGLVQRAKRFLSQDTIHFE-----DLL 522

Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
           Q++ + RR+ E + + A  +  E        ED  + L+ +   +     ++  + +  A
Sbjct: 523 QNIEKNRRESEIERQEAKRIRLEAEKFAEGYEDRKQRLEAQRDQILRDAKKEAYRLVKEA 582

Query: 612 KVQIDTVVQDFENQLRDASADEINSLIKESESAIAA 647
           K+  + +++       +  A E+N  ++++++ +  
Sbjct: 583 KMDSEHIIKGLREMKFELEAKEMNKKMEDAKNQLTG 618


>gi|433443934|ref|ZP_20409057.1| recombination and DNA strand exchange inhibitor protein
           [Anoxybacillus flavithermus TNO-09.006]
 gi|432001908|gb|ELK22775.1| recombination and DNA strand exchange inhibitor protein
           [Anoxybacillus flavithermus TNO-09.006]
          Length = 781

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 222/707 (31%), Positives = 350/707 (49%), Gaps = 84/707 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I D+      A  G  LSP E+  +  T+RA   + KK  EA E D   +  Y+   
Sbjct: 65  LGGIFDVRMQTKRASIGGTLSPHELLDIASTMRAARQL-KKFLEATEADLPHMIAYAA-- 121

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
                   L ELE++I  CID +   +LD AS+ L  +R + +    R  + L+S+++  
Sbjct: 122 ----QIVPLPELEQRIYHCID-ESGDVLDGASDRLRSLRQQLRTIEGRVRDKLESIIRSS 176

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           +AQ      +   +IT R  R  + +K  +++    GI  + SSSGAT F+EP+  VE N
Sbjct: 177 SAQ----KTLSDAIITIRNDRYVIPVKQEYRHTY-GGIVHDQSSSGATLFIEPQSVVELN 231

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N   +L   E  E   ILS L+A + +    I   ++ + ++D  FA+A +A+ +    P
Sbjct: 232 NELQQLRVKEKQEIERILSELSASVGEQATTIIENVELLAQLDFLFAKAKYAKAIKATKP 291

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
            ++ + ++    +      +HPL+                P                   
Sbjct: 292 AINERGYIRLIQA------RHPLI----------------P------------------- 310

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
           SD  VP DI++      +VITGPNTGGKT ++KT+GL ++M++AGL +PA +  +L  F 
Sbjct: 311 SDEVVPNDIELGSNYTTMVITGPNTGGKTVTLKTIGLFTVMAQAGLQVPALDGSQLAVFR 370

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            + ADIGD QS+EQ+LSTFS H+  IVDIL+ V   SLVL DE+G+GTDP EG ALA +I
Sbjct: 371 AVYADIGDEQSIEQSLSTFSSHMVNIVDILKQVDEHSLVLFDELGAGTDPQEGAALAIAI 430

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L  + +R    V TTHY +L           NA+ EF +ETL PTY++L G  G SNAL+
Sbjct: 431 LDEVHNRGARVVATTHYPELKAYGYNRRGVMNASVEFDIETLSPTYKLLIGIPGRSNALD 490

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I++ +G D  II RA+  +       + +    +  SL + +++ E +   A  L  E  
Sbjct: 491 ISRRLGLDEHIIARARTYI-----SAESNEVENMIASLEQSKKRAEEEWEKAERLRHEAE 545

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEIN 635
            L  E+E +  +L+ +   L  K  +Q ++ +  A    D V+Q   + Q + A+A + +
Sbjct: 546 QLRNELERQWNELNEQRDRLLEKAKEQAEEIVKKAMKTADEVIQHLRDMQKQQAAAIKEH 605

Query: 636 SLI---KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 692
            LI   K+ E AI  I    +       ++       P  G++V V  L  K   + +V 
Sbjct: 606 ELIEARKKLEEAIPQINTKKKKR-----AQQTKQPLHP--GDEVKVVHLNQKGQLIEKV- 657

Query: 693 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTC 739
             D   LVQ G ++++V + N++ +        ++PAP   K + T 
Sbjct: 658 -SDKEWLVQIGILKMKVHEENLQYV--------SSPAPIETKPIATV 695


>gi|427702746|ref|YP_007045968.1| MutS2 family protein [Cyanobium gracile PCC 6307]
 gi|427345914|gb|AFY28627.1| MutS2 family protein [Cyanobium gracile PCC 6307]
          Length = 820

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 168/444 (37%), Positives = 243/444 (54%), Gaps = 64/444 (14%)

Query: 102 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVA 157
           L+     L ELE+++ FC++ +   + DRAS  LE +R    A R    + L  L+++  
Sbjct: 127 LVAELRTLPELEQRLHFCLE-EGGRVADRASGPLEAVRRQLLALRAERRDRLQELVRRYG 185

Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
           + +         ++++R  R  + +KA     +  G+  + S+SG+T ++EP+  +   N
Sbjct: 186 SLL------QDTVVSERGGRPVLAVKAGAAAQV-GGLVHDSSASGSTVYVEPQAVIPLGN 238

Query: 218 MEVRLSNSEIAE---ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
              R+ ++E  E   E  + S L+A + +    + +L   ++ ID   ARA + QW+  V
Sbjct: 239 ---RIRDAEGQERELERQVRSELSALVGEQAEPLDHLQQVLVRIDAGLARARYGQWLGAV 295

Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
            P L+     S D+   +  ++HPLLL    R          P+                
Sbjct: 296 RPELAD----SADAPFELCDLRHPLLLWQERRE------GGRPV---------------- 329

Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
                 VP+ I+V  E RVV ITGPNTGGKT ++K+LGLA+LM++AGL+LP    PRLPW
Sbjct: 330 ------VPVTIRVGPELRVVAITGPNTGGKTVTLKSLGLAALMARAGLFLPCAGTPRLPW 383

Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELV--------------SRESLVLIDEI 440
              +LADIGD QSL+QNLSTFSGHI RI  IL  +                 SLVL+DE+
Sbjct: 384 CGQVLADIGDEQSLQQNLSTFSGHIRRIARILAALPAGAGFPEGAALPQGPASLVLLDEV 443

Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
           G+GTDP+EG ALA ++L++L DR  L V TTH+ +L  LK  D RFENA+  F +ETL P
Sbjct: 444 GAGTDPTEGSALAAALLRHLADRARLTVATTHFGELKALKYADPRFENASVAFDVETLSP 503

Query: 501 TYRILWGSTGDSNALNIAKSIGFD 524
           TYR+ WG  G SNAL IA  +G D
Sbjct: 504 TYRLQWGIPGRSNALAIASRLGLD 527


>gi|354559953|ref|ZP_08979193.1| MutS2 protein [Desulfitobacterium metallireducens DSM 15288]
 gi|353539467|gb|EHC08953.1| MutS2 protein [Desulfitobacterium metallireducens DSM 15288]
          Length = 792

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 213/724 (29%), Positives = 355/724 (49%), Gaps = 96/724 (13%)

Query: 18  EESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           ++ Q  L +T    A+++  PL  +   ++I  +L   + G  LSP E+  +R TL+A  
Sbjct: 43  DQVQNALAETGEGKALLRVNPLFSVRGAKEIRPLLERCLRGGTLSPEELLHIRDTLKAAR 102

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
            + + L E  +++   LQ      E++   +    +E++I  CI  +  +  D+AS  L 
Sbjct: 103 QIKQSLLEG-KMETPHLQ------EIVLGIDPPKGIEDEISRCISEEGSVA-DQASPQLG 154

Query: 137 LIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
             R      ++R  + L+ +++  A Q      +  P+IT+R  R  V +K  ++     
Sbjct: 155 EFRRSITRLQQRIRDTLEGIVRNSAYQKI----LQDPIITQRSDRYVVPVKQEYRQAF-S 209

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           GI  + S+SGAT ++EP   V   N    +   E  E   IL  L+A++      I    
Sbjct: 210 GIVHDQSASGATLYIEPMAVVNLGNELREVILKEQREVQRILLQLSAQVEGEAERIADAH 269

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
           + + ++D   A++  ++ M+   P LS Q  +    +      +HPLL GS         
Sbjct: 270 EALAQVDFILAKSHLSESMNSGAPELSDQQEIKLVQA------RHPLLSGSV-------- 315

Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
                                       VP++I++      +VITGPNTGGKT +++T+G
Sbjct: 316 ----------------------------VPLNIELGKRFDTIVITGPNTGGKTVALRTVG 347

Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
           L S M+++GL++PA+ + RL  F  I  DIGD QS+EQ+LSTFSGH+  IVDI+      
Sbjct: 348 LLSAMAQSGLHIPAEANSRLGIFTQIFVDIGDEQSVEQSLSTFSGHMKNIVDIVLGADSH 407

Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
           SL+L+DEIG+GTDP+EG ALA SI+  L +R    + TTHY  L        R ENA+ E
Sbjct: 408 SLILLDEIGAGTDPTEGAALAMSIITELHERGCRIIATTHYGALKSFAYNTPRVENASVE 467

Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
           F +ETLRPTYR+L G  G SNA  IA  +G +  +++RA+  V     ER+  + ++L  
Sbjct: 468 FDVETLRPTYRLLIGIPGKSNAFYIASRLGLNDTVLERAKSFV----TEREM-QVADLID 522

Query: 553 SLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE---TQQVQQELN 609
           +L + +R +E +               R I++E K ++  ++ LKAK     +  Q+ L 
Sbjct: 523 NLEDTQRDIEREK--------------RRIQEERKTIETESSQLKAKSLKLEEDYQELLA 568

Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS------VSET 663
            A+ +   V++   ++  +   +++   +KE      AI  A +     S        E 
Sbjct: 569 LAQDEATEVLRQTRHEA-ELLIEDLKQALKEENKDQHAIEHARQRIKKLSNKVGTKEKEI 627

Query: 664 NTSS---FTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
            TS+     P+    G+ +++  L  K   V+++P D+  VLVQ G M++ V+ + +R +
Sbjct: 628 RTSAGGGINPEEIKLGQTLYLTKLRQK-GHVLKLPTDNGEVLVQVGVMKLNVQLSEVRLV 686

Query: 718 PNSK 721
              K
Sbjct: 687 QEEK 690


>gi|298243242|ref|ZP_06967049.1| MutS2 family protein [Ktedonobacter racemifer DSM 44963]
 gi|297556296|gb|EFH90160.1| MutS2 family protein [Ktedonobacter racemifer DSM 44963]
          Length = 816

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 230/751 (30%), Positives = 362/751 (48%), Gaps = 125/751 (16%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L+E+++ L  T+ A+ ++   P + +    DI  +L  +    +L+PS++  V  T+R+ 
Sbjct: 40  LDEARRRLAYTTEAIRLIDLYPDVGVRGAHDIRPLLVRSSREGILAPSDLVEVLETVRSS 99

Query: 76  NNVWKKLTEAAELDGDSLQ-RYSPLLELL-----KNCNFLTELEEKIGFCIDCKLLIILD 129
             V + L        D L+  + PLL +L     +    +  +EE +    +     +LD
Sbjct: 100 LYVARLL--------DKLEPEHYPLLHMLGSDIPQRPQIVRRIEETVSEEGE-----VLD 146

Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            AS  L  +R + +   + L   L+ +  +  +   + +P+IT R  R  + ++A  +  
Sbjct: 147 TASPTLRKLRFDIRGASQRLQDRLRSLVGEYGKH--LQEPIITMRNDRYVIPVRAESRGQ 204

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
           +  GI  + SSSGAT F+EP   VE NN    L   E  E   IL +L+AEI      + 
Sbjct: 205 V-RGIVHDQSSSGATVFVEPMVVVELNNRIRELQVEERREIERILRVLSAEIGHEAESLT 263

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
             ++ + E D   A++ +A+      PIL+++        I++   +HPLL G       
Sbjct: 264 VAVELLAEFDTYLAKSRYARMTSASEPILNAEGR------IDLHNARHPLLTGKV----- 312

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                                          VP +  +  E  +VVITGPNTGGKT ++K
Sbjct: 313 -------------------------------VPTNFYLGREFHMVVITGPNTGGKTVALK 341

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE-- 427
           T+GL +LM+++G+++PA  H  +  F+ +LADIGD QS+EQ+LSTFS H+SRI+DIL   
Sbjct: 342 TVGLLTLMAQSGMHIPADVHSEIAVFEDVLADIGDEQSIEQSLSTFSSHMSRIIDILRRV 401

Query: 428 ------------------LVSRES---LVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
                             LV R++   LVL DE+G+GTDPSEG ALA +IL YL +R   
Sbjct: 402 EAVQQQDVPDIHGRLAETLVKRQNHHVLVLFDELGAGTDPSEGSALARAILSYLLERKVS 461

Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
            V TTHY +L     +     NA+ EF++ETL PTY++  G  G SNAL IA  +G D  
Sbjct: 462 TVATTHYTELKAFAYEQPGVVNASVEFNVETLSPTYKLSIGLPGRSNALAIATRLGLDEP 521

Query: 527 IIQ-----------RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
           II+           R + L+E L+ ERQ       + S+  ER + E Q +        +
Sbjct: 522 IIESSRQFLGSSGVRMENLLEGLQSERQAASDERYHLSM--ERAEAEYQRKQLQEERHRL 579

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID--TVVQDFENQLRDASADE 633
            +   +I ++A+   RR       E  +VQ +L   +   D  +V ++  NQ RD +   
Sbjct: 580 EEERVKIINQARAQARR-------ELDEVQNKLAKIRATADRASVSRERLNQARDTA--- 629

Query: 634 INSLIKESESAIAAIVEAHRP-DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 692
                +  E  +A + E  +P  +D +V   +      Q G+ V V S G +LA +V + 
Sbjct: 630 -----RHLEDKVALVPEPAQPRKEDPAVQRLDGPL---QLGDTVRVLSFG-QLAELVGLS 680

Query: 693 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
            D  +  VQ G MR RV  +NI  +  SKR+
Sbjct: 681 PDHSSAEVQMGSMRFRVDVDNIERV--SKRQ 709


>gi|225018643|ref|ZP_03707835.1| hypothetical protein CLOSTMETH_02593 [Clostridium methylpentosum
           DSM 5476]
 gi|224948551|gb|EEG29760.1| hypothetical protein CLOSTMETH_02593 [Clostridium methylpentosum
           DSM 5476]
          Length = 795

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 201/626 (32%), Positives = 308/626 (49%), Gaps = 90/626 (14%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           I D AS +L  IR + ++N     ++LD ++K        A  +   +IT R  R  V +
Sbjct: 145 IDDNASVELSNIRRKIRQNSTKARDSLDRIIKN------NAKYLQDSIITMRDGRYVVPV 198

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEI 241
           KA H+  +P G+  + S+SGAT F+EP   VE NN E+R L + E  E   IL+ L+AE 
Sbjct: 199 KAEHRGEVP-GLVHDTSASGATLFVEPMSVVEANN-EIRVLMSKEQDEIERILAELSAEC 256

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
           A     I+     ++ ++L FA+A     M  V P ++   ++S   +      +HPL+ 
Sbjct: 257 ADFAESIRNNFRLIILLNLYFAKANLGASMRAVKPFVTDDGYISLKKA------RHPLI- 309

Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
                                               D  VPIDI++      ++ITGPNT
Sbjct: 310 ----------------------------------DKDKVVPIDIELGRGFTSLIITGPNT 335

Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
           GGKT S+KTLGL +LM+  GL +P  +  R+  FD +L DIGD QS+EQ+LSTFS H++ 
Sbjct: 336 GGKTVSLKTLGLLTLMTMCGLLIPVADQSRISIFDKVLVDIGDEQSIEQSLSTFSAHMTN 395

Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
           I+ ILE     SLVL+DE+GSGTDP EG ALA SI++ +  R      TTHYA+L     
Sbjct: 396 IISILEEADDRSLVLVDELGSGTDPVEGAALAISIIEEISARGSRLAATTHYAELKAYAL 455

Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA---------- 531
           +    ENA  EF + TL+PTYR+L G  G SNA  I++ +G +  I+ RA          
Sbjct: 456 ETKGVENACCEFDVATLQPTYRLLIGVPGRSNAFAISRRLGLEEHILDRAEGYISSDNRR 515

Query: 532 -QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
            + +V+ L   RQ + K         ER +LE + R    L+A       ++  + K L+
Sbjct: 516 FEDVVDSLEQARQDYEK---------ERAELEEKNREYERLNA-------QLNAKRKGLE 559

Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV- 649
               H   +  ++ +  ++  + + D ++ + E   +     ++  L + + S +   + 
Sbjct: 560 NAGEHEIERAREKAKYIVDKVRAESDALLNELEELRKQKEKTDVAELARRARSQMNGKIS 619

Query: 650 ----EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
               EA+   +    +ET       + G++V V  L DK A V+E P     V+VQ G M
Sbjct: 620 RLYDEANPVRERMGTNETYKLPRPLRKGDEVLVYDL-DKQAVVLEEPDKSGNVMVQMGIM 678

Query: 706 RVRVKKNNIRPIPNSKRKNAANPAPR 731
           + RVK  N+R I   ++KN     P+
Sbjct: 679 KTRVKLKNLRLI---EQKNPYKEKPK 701


>gi|253579597|ref|ZP_04856866.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849098|gb|EES77059.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 793

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 221/740 (29%), Positives = 354/740 (47%), Gaps = 101/740 (13%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQL 59
           MG  + +K + P    ++E + +  QT  AL  + Q   +   +++D+ G L     G  
Sbjct: 26  MGKEICRKLE-P-STDIDEIRHMQTQTRDALTRLFQKGNISFGSVKDVRGSLKRLEIGSS 83

Query: 60  LSPSEICAVRRTLRAVNNVWKKLTEAAE--------LDG--DSLQRYSPLLELLKNCNFL 109
           L   E+ A+   L   N V  K    +E        LDG  ++L+  +PL   ++ C  L
Sbjct: 84  LGIGELLAICSLLENTNRV--KAYSRSERGDSLPDSLDGMFEALEPLTPLTTEIRRC-IL 140

Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGG 165
           +E E             I D AS +L  IR   K    R    L SL+   A    Q   
Sbjct: 141 SEDE-------------ISDDASSNLRQIRRNMKITGDRIHTQLSSLVNGSARNYLQ--- 184

Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
               +IT R  R C+ +KA +K  +P G+  + SS+G+T F+EP   V+ NN    L   
Sbjct: 185 --DSVITMRNGRYCIPVKAEYKGQVP-GMVHDQSSTGSTLFIEPMAIVKLNNDIRELELE 241

Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
           E  E   ILS L+ + A+    I+  ++ ++++D+ FARA  A  M+   PI + +    
Sbjct: 242 EQKEIEVILSTLSQQTAEQTDSIRADLNIMVQLDVIFARASLAMDMNATEPIFNDEGR-- 299

Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
               I ++  +HPL+                    D + +               VPIDI
Sbjct: 300 ----IRLKQARHPLI--------------------DKKKA---------------VPIDI 320

Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
           ++  +  ++VITGPNTGGKT S+KT+GL +LM ++GL++P  +   L  F+ + ADIGD 
Sbjct: 321 RLGDDFDLLVITGPNTGGKTVSLKTVGLLTLMGQSGLHIPTLDRSELALFEEVYADIGDE 380

Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
           QS+EQ+LSTFS H++ +V  L+  +R SLVL DE+G+GTDP+EG ALA +IL +L ++  
Sbjct: 381 QSIEQSLSTFSSHMTNVVSFLKKANRHSLVLFDELGAGTDPTEGAALAIAILSHLHEQGI 440

Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
             + TTHY++L       +  ENA  EF +ETLRPTYR+L G  G SNA  I+  +G   
Sbjct: 441 RTMATTHYSELKVYALSTSGVENACCEFDVETLRPTYRLLIGVPGKSNAFAISSKLGLPD 500

Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
            II +A++ +       Q     ++  SL   R  +E++ R       EI  L  E+E +
Sbjct: 501 YIIDKAKEQI-----SEQDESFEDVLSSLESSRITIENERREIEQYKQEIASLKSEMESK 555

Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ---DFENQLRDASADE-----INSL 637
            + L+ +   +  +  ++    L  AK   D  ++    F+    D SA E     +   
Sbjct: 556 QEKLNEQRDRIIRQANEEAHAVLREAKEYADQTMKMFHKFQKDHVDLSAVEKERQNLRKH 615

Query: 638 IKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 697
           + ++E  +     A +P  + +  + +        G+ V V S+  K  TV   P +   
Sbjct: 616 MNKAEKGMTQKTAAKKPKKELTAKDIS-------LGDAVKVLSMNLK-GTVSSRPDNKGF 667

Query: 698 VLVQYGKMRVRVKKNNIRPI 717
           + VQ G +R +V  +++  I
Sbjct: 668 LFVQMGIIRSKVHISDLELI 687


>gi|146296717|ref|YP_001180488.1| MutS2 family protein [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|238685558|sp|A4XK62.1|MUTS2_CALS8 RecName: Full=MutS2 protein
 gi|145410293|gb|ABP67297.1| MutS2 family protein [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 787

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 213/691 (30%), Positives = 354/691 (51%), Gaps = 96/691 (13%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
            E+I   L  +  G  L+P EI  + + L+    +   L+          Q +S L  + 
Sbjct: 68  FENILPSLKKSKLGATLNPHEILQIGKVLKLSYEMRSYLSYT--------QDFSFLESMK 119

Query: 104 KNCNFLTELEEKIGFCIDCKLLI---ILDRASEDLELIRAERKRNMEN-----LDSLLKK 155
           K    L  L+E I   ID   L    ILD AS  L+ IR +R R +E+     L+S+++ 
Sbjct: 120 KR---LVNLKEVIS-RIDQTFLTADEILDTASPRLKEIR-DRIRKLESRIRDELNSMIRD 174

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
              Q F    + +P+IT R  ++ + +KA  +  +  GI  + S++GAT F+EP   VE 
Sbjct: 175 PKIQRF----LQEPIITIRGEKLLLPVKAEFRNEVK-GIVHDQSATGATLFVEPFVCVEI 229

Query: 216 NNMEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
           +N ++R+  S+  EE   IL  +++ IA    EI+     ++E+D+ F +A +A+ M+  
Sbjct: 230 SN-QIRILKSQEKEEIERILQEISSLIASYCDEIETSFYALVELDIVFTKAIWAKEMNAS 288

Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
            P++++         IN++  +HPL+                                  
Sbjct: 289 KPVINTSG------IINLKKARHPLIQ--------------------------------- 309

Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
              D  VPIDI +  +  V++ITGPNTGGKT ++KT+GL  L+ ++G+++PA    +L  
Sbjct: 310 --KDKVVPIDIHLGKDFDVLIITGPNTGGKTVTLKTVGLFCLLCQSGIFIPADEDSQLCI 367

Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
           F  I ADIGD QS+ Q+LSTFS H+  I++I +    ++LVL+DEIG+GTDP EG ALA 
Sbjct: 368 FQKIFADIGDDQSIVQSLSTFSAHMKNIIEITKNADDKTLVLLDEIGAGTDPEEGAALAK 427

Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
           +IL+YL ++    + TTHY +L     ++ RFENA+ EF ++TL+PTYR+L G  G SNA
Sbjct: 428 AILKYLSEKGSKVIATTHYGELKIFAQQEDRFENASCEFDVKTLKPTYRLLIGIPGRSNA 487

Query: 515 LNIAKSIGFDRKIIQRA-----QKLV--ERLRPERQQHRKSELYQSLMEERRKLESQART 567
           L I+ ++G D+ I++ A     QK +  +R+  E +Q RK       +  + KLE+QA  
Sbjct: 488 LVISSNLGLDKGIVEMARGYLSQKTIDLDRIINEMEQKRKEAEENLELARKLKLEAQALK 547

Query: 568 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF----E 623
           AA             E+E K  +     ++ K   + ++ +  A+ +I+ + +D     E
Sbjct: 548 AA------------YEEEKKRFETERERIRKKAINEAKEIVERAQYEIENLFKDLRKLAE 595

Query: 624 NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGD 683
           N        E+    +E E  I +I +  + + +   S+T  +    + G++V+V+S  D
Sbjct: 596 NLKEKEVLKELEEKKREYERLIQSISQQEKQEAE---SKTKKTLQNIRLGQKVYVRSF-D 651

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
            +  V  +P     + VQ G M++ V  ++I
Sbjct: 652 AVGFVESLPDSKGNLTVQIGIMKLNVNISDI 682


>gi|312127327|ref|YP_003992201.1| muts2 family protein [Caldicellulosiruptor hydrothermalis 108]
 gi|311777346|gb|ADQ06832.1| MutS2 family protein [Caldicellulosiruptor hydrothermalis 108]
          Length = 787

 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 214/687 (31%), Positives = 345/687 (50%), Gaps = 88/687 (12%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
           DI+ IL  A +  +L+P  I AV R L+    V   L  A   DG  L+     L  LK 
Sbjct: 70  DISLILKKARAQAILTPHGILAVGRILKLSQEVRSYLANA---DGSYLKSSREKLFYLKE 126

Query: 106 CN------FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLK 154
                   FLT  E             ILD AS  L+ IR +R R +E      L+ +++
Sbjct: 127 LTARIDQTFLTPEE-------------ILDTASPRLKEIR-DRIRRLETRIRDELNRMIR 172

Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
               Q F    + +P+IT R  ++ + +KA HK  +  GI  + S++GAT F+EP   VE
Sbjct: 173 DHKIQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGATLFVEPFVCVE 227

Query: 215 FNNMEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
            +N ++R++ SE  EE   IL  L+  I+++  EIK   + + E+D+ F +A +A     
Sbjct: 228 ISN-QIRVARSEEKEEIERILQELSQLISRNYNEIKQNFESLSELDILFTKAQWAHQFRA 286

Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
             PIL++  +      IN++  +HPL+    +                            
Sbjct: 287 SKPILNTAGY------INLKKARHPLIEKERV---------------------------- 312

Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
                  VPID+ +  E  V+VITGPNTGGKT ++KT+GL  L++++G++LPA     + 
Sbjct: 313 -------VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGMFLPADEGSEVC 365

Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
            F  I ADIGD QS+ Q+LSTFS H+  I++I +     +LVL+DEIGSGTDP EG ALA
Sbjct: 366 VFSKIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALA 425

Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
            +IL++L  +    V TTHY +L     ++ RFENA+ EF + TL+PTYR+L G  G SN
Sbjct: 426 KAILKFLYRKGSKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSN 485

Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
           AL I+ ++G   +I++ A+  + +   E      +++   +  +R++LE    +A  L  
Sbjct: 486 ALYISSNLGLKEEIVELAKSYMSKKTLEL-----TDIINEMERKRKELEEALESANKLKI 540

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
           E  +L R +E+E +  +     +K +  ++ ++   F +   D V + F+   + A + +
Sbjct: 541 EAENLKRSLEEERRRFEAEKQRIKERSVKEARE---FVQRVEDEVEKLFKELRKIAESLK 597

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVE 690
              ++K+ E          +  +  S  E    S  P+    G++V+VKS  D    V  
Sbjct: 598 EKEMLKQLEEKKREYENLVKSIEQASQKEKKLQSKLPENLRLGQKVYVKSF-DAEGFVES 656

Query: 691 VPGDDDTVLVQYGKMRVRVKKNNIRPI 717
           +P     + V+ G M++ V  +++  I
Sbjct: 657 LPDSKGNLTVRIGIMKLSVNISDVFEI 683


>gi|312622156|ref|YP_004023769.1| muts2 family protein [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202623|gb|ADQ45950.1| MutS2 family protein [Caldicellulosiruptor kronotskyensis 2002]
          Length = 787

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 211/693 (30%), Positives = 349/693 (50%), Gaps = 94/693 (13%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
            E+I   L  +  G  L+P EI  + + L+    +   L+          Q +S L  + 
Sbjct: 68  FENILPSLKKSKLGATLNPQEILQIGKVLKLSYEMRTYLSYT--------QDFSFLESMK 119

Query: 104 KNCNFLTELEEKIGFCIDCKLLI---ILDRASEDLELIRAERKRNMEN-----LDSLLKK 155
           K    L  L+E I   ID   L    ILD AS  L+ IR ++ R +EN     L+S+++ 
Sbjct: 120 KR---LVNLKEVIS-RIDQTFLTPDEILDTASSKLKEIR-DKIRKLENKIRDELNSMIRD 174

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
              Q F    + +P+IT R  ++ + +KA  +  +  GI  + S++GAT F+EP   VE 
Sbjct: 175 PKIQRF----LQEPIITIRGEKLLLPVKAEFRNEVK-GIIHDQSATGATLFVEPFVCVEI 229

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           +N    L N E  E   IL  +++ IA    EI+     ++E+D+ F +A +A+ M+   
Sbjct: 230 SNQIRILKNKEKEEIERILQEISSLIASYCEEIETSFYALVELDIVFTKAIWAKEMNASK 289

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI+++         IN++  +HPL+                                   
Sbjct: 290 PIINASG------IINLKKARHPLIQ---------------------------------- 309

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             D  VPIDI +  +  V++ITGPNTGGKT ++KT+GL  L+ ++G+++PA     L  F
Sbjct: 310 -KDKVVPIDIHLGKDFDVLIITGPNTGGKTVTLKTVGLFCLLCQSGIFIPADEGSELCIF 368

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+ Q+LSTFS H+  I++I +    ++LVL+DEIG+GTDP EG ALA +
Sbjct: 369 QKIFADIGDDQSIVQSLSTFSAHMKNIIEITKNADDKTLVLLDEIGAGTDPEEGAALAKA 428

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL+YL ++    + TTHY +L     ++ RFENA+ EF ++TL+PTYR+L G  G SNAL
Sbjct: 429 ILKYLSEKGSKVIATTHYGELKIFAQQENRFENASCEFDVKTLKPTYRLLIGIPGRSNAL 488

Query: 516 NIAKSIGFDRKIIQRA-----QKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTA 568
            I+ ++G D+ I++ A     QK +  +R+  E +Q +K       + ++ K E+QA  A
Sbjct: 489 VISSNLGLDKGIVEMARGYLSQKTIDLDRIINEMEQKKKEAEENLELAQKLKHEAQALKA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF----EN 624
           A             E+E K  +     ++ K   + ++ +  ++ +I+ + +D     EN
Sbjct: 549 A------------YEEEKKRFETERERIRKKAINEAKEIVERSQYEIENLFKDLRKLAEN 596

Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
                   E+    +E E  I +I +  + + +   S+T  +    + G++V+V+S  D 
Sbjct: 597 LKEKEVLKELEEKKREYERLIQSISQQEKQEAE---SKTKKTIQNLRLGQKVYVRSF-DA 652

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
              V  +P     + VQ G M++ V  ++I  +
Sbjct: 653 EGFVESLPDSKGNLTVQIGIMKINVNLSDIEEV 685


>gi|160933325|ref|ZP_02080713.1| hypothetical protein CLOLEP_02170 [Clostridium leptum DSM 753]
 gi|156867202|gb|EDO60574.1| MutS2 family protein [Clostridium leptum DSM 753]
          Length = 791

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 232/713 (32%), Positives = 345/713 (48%), Gaps = 89/713 (12%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLE 101
           ++++A  L  A +G  LS  E+  V   LR +  +  W+K +E  E   D   R+    E
Sbjct: 71  LQNVANSLRRAQAGASLSMGELLKVAEVLRVMRGLIQWRKRSEGLETSID--WRF----E 124

Query: 102 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVA 157
            L    +L   EEKI   I  +  +  D AS+ L  IR    A   R  E LD ++   A
Sbjct: 125 ALPPNKYL---EEKIASSILSEEEMA-DGASQALGDIRRKINAASLRVREKLDHMIHSPA 180

Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
            Q +    + +P++T R  R  V +KA  +  +P G+  + S SGAT F+EP   VE NN
Sbjct: 181 YQKY----LQEPIVTLRGGRFVVPVKAECRGEVP-GLVHDTSGSGATVFVEPMAVVEANN 235

Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
               L + E AE   IL  L+ E       I    +  +E+D+ FA+A  A  M    P 
Sbjct: 236 DIKVLKSKEEAEIERILYELSQEAGGFADSIIEGYNAAIELDILFAKAKLAYRMKATLPE 295

Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
           ++ Q  +    +      +HPL+               +P                K + 
Sbjct: 296 VNDQGKIYLKKA------RHPLI---------------DP----------------KAV- 317

Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
              V  DI++  +   +VITGPNTGGKT S+KT+GL +LM+  GL LPA +   +  F  
Sbjct: 318 ---VATDIELGLQFDTLVITGPNTGGKTVSLKTIGLLTLMAMCGLLLPASDGSMVSVFSQ 374

Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE--SLVLIDEIGSGTDPSEGVALATS 455
           +LADIGD QS+EQ+LSTFS H++ ++ IL  V RE  SLVLIDE+G+GTDP EG ALA +
Sbjct: 375 VLADIGDEQSIEQSLSTFSAHMTNMIHILSSVEREGISLVLIDELGAGTDPVEGAALAMA 434

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL+ LR        TTHYA+L     +    EN   EF + TLRPTYR+L G  G SNA 
Sbjct: 435 ILETLRASQVRIAATTHYAELKAYALQTAGVENGCCEFDVATLRPTYRLLIGVPGRSNAF 494

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            I++ +G D+ I+ RA++LV       +  R  ++ ++L E R+ LE + + A  L A+ 
Sbjct: 495 AISERLGMDQHIVARARELV-----SAENSRFEDVVRNLEESRQSLEQERKEAQELSAQA 549

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR------DA 629
               +E E  A+ L RR +  + ++ +   + L          + D  + LR      DA
Sbjct: 550 QQYRQEAEQRAEKL-RRDSEAELEKARVEARNLVARARAQAQALMDELDDLRKKNREIDA 608

Query: 630 SAD-EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 688
            A   + + I+E E+    + E  +  +D+ +          Q G+ V +  L DK A V
Sbjct: 609 QAKARLKAGIREMENTADPVKE--KQGEDYRLPR------ALQAGDSVLIYDL-DKKAVV 659

Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTCTS 741
           +E       VLVQ G ++ RV   N+R +   K++    P  R  + V T  S
Sbjct: 660 LEPADSSGNVLVQAGIIKTRVPVGNLRLL---KQEKVQKPKGRGVRTVKTRAS 709


>gi|356498910|ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
          Length = 792

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 232/773 (30%), Positives = 373/773 (48%), Gaps = 102/773 (13%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQL- 59
           +G   ++       ++ EES KLL +T+AA+ M +   L L      A ++ +A+     
Sbjct: 62  LGRQALKDQLWSLNQTFEESLKLLEETNAAVEMNKHGTLRLHLGHLDAMLVKTAIQHARR 121

Query: 60  ---LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
              +S  E  A+   L+    V   L    + D D   R+ PL E++        L + I
Sbjct: 122 SIPVSGYEARAIVALLQCAEIVQGDLKAVIKEDKDWHNRFMPLTEVIMEFVINRSLIKAI 181

Query: 117 GFCIDCKLLIILDRASEDLELIRAERK---RNMENL-DSLLK--KVAAQIFQAGGIDKPL 170
              +D +   I D AS  L+  R + +   R ++ L +S+++  K      +   ID   
Sbjct: 182 EQVVD-EDGSIKDSASPALKQARQQVQVIERKVQQLIESIIRNEKSETSTLEVNNID--- 237

Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
                 R CV + +  K     G+ L+ S SG    +EP  AV  N+   R  +  +  E
Sbjct: 238 -----GRWCVRVDSGQKTSF-KGLLLS-SGSGVGSTIEPLSAVPLNDELQRARSLVVKAE 290

Query: 231 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL-------SSQSH 283
             +L  LT ++     +I+  ++ ++E+D+  ARA +     G  P +       SS + 
Sbjct: 291 ADVLLALTKKMQLDLDDIEKTLNSLVELDVINARATYGLSFGGSSPHIFLPDRSSSSTAE 350

Query: 284 VSFDSSINIEG--------------IKHPLLLGSSLRSLSAASSNSNPLKSD--VENSEM 327
                S N+ G                HPLLL      L  A  N N   SD  ++N+  
Sbjct: 351 AFLPRSENLYGPLPSKREWTLYLLKAYHPLLLQRHKEKLRKAKKNVNLATSDAALDNAP- 409

Query: 328 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 387
                       PVP+D  V  +TRV+VITGPNTGGKT  +KT+GLA++M+K+GLY+ A 
Sbjct: 410 ------------PVPVDFLVSQKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLAS 457

Query: 388 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 447
              ++PWFD + ADIGD QSL Q+LSTFSGH+ +I +I    + +SLVL+DE+G+GT+P 
Sbjct: 458 ESAQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKSQSTSQSLVLLDEVGAGTNPL 517

Query: 448 EGVALATSILQ-YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
           EG AL  ++L+ + +D   L + TTH+ +L  LK  D  FENA  EF    L+PTY++LW
Sbjct: 518 EGAALGMALLESFAQDSCLLTMATTHHGELKTLKYSDEAFENACMEFDEVNLKPTYKVLW 577

Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKL--------------VERLRPERQQ-------- 544
           G  G SNA+NIA+ +G    ++  A+ L              +ERL+ E Q+        
Sbjct: 578 GVPGRSNAINIAERLGLPSVVVDTARMLYGSASAEIDEVITDMERLKQEYQELLDEARHY 637

Query: 545 --HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
             H +  LY SL+  RRK+      + +L  + M   R++  EA  + R   H K +E  
Sbjct: 638 LRHSRG-LYNSLLNTRRKI---IEYSTNLRFKKM---RDV-SEAAAMARSILHKKVRELD 689

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
              ++ +     I +      N+ +  + ++  ++  +S S++            F+ S 
Sbjct: 690 ASAKQPSQNNKTISSSNLSATNKSQTVAENKEPTIADKSASSVKV----------FNRSR 739

Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           ++ S   P+ G+ VHV SLG K  TV++V      ++VQ G M++++K  +I+
Sbjct: 740 SDKSG-PPKVGDMVHVSSLG-KQVTVLKVDSSKGEIVVQAGNMKLKLKLTDIQ 790


>gi|302391195|ref|YP_003827015.1| MutS2 family protein [Acetohalobium arabaticum DSM 5501]
 gi|302203272|gb|ADL11950.1| MutS2 family protein [Acetohalobium arabaticum DSM 5501]
          Length = 801

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 219/720 (30%), Positives = 347/720 (48%), Gaps = 120/720 (16%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT--EAAELDGDSLQRYSP 98
           L  I+D+   L        L+  E+  +  TL    N+ + L   E  E +  S+ +Y  
Sbjct: 66  LGGIKDVRDSLKRTSKEITLNGEELVEIADTLSTSRNLKRYLLNLEDEEDEYKSVVKYGT 125

Query: 99  LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
            L+     NF   LE KI   +D +   +LD AS  L  IR       +R  + L+S+L 
Sbjct: 126 QLD-----NF-KPLERKINKAVDNQG-NVLDTASTKLRNIRRSITDYSQRIKDKLNSILS 178

Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
               Q +    I   L+T R  R  + IK+  +  +  GI  + S+S  T F+EP   V+
Sbjct: 179 SKKYQSY----IQDSLVTIRDKRYVIPIKSQFQEKVS-GIVHDQSASKQTVFIEPMAVVK 233

Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
            NN        E  E   IL+ LT E+ +    IK  +  +  +D  FA+A ++  ++G 
Sbjct: 234 LNNKLRSFMAEEEEEVYRILTELTYEVREELDRIKETLKLLAWLDFTFAKAEYSFKIEGA 293

Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
            P+L+ + +      IN+E  +HPL+                P                 
Sbjct: 294 EPVLNQEEY------INLEKARHPLI----------------P----------------- 314

Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
              D  VPIDIK+  +   +VITGPNTGGKT ++KT+GL +LM+++GL++PA +  ++  
Sbjct: 315 --QDEVVPIDIKLGGKFDTLVITGPNTGGKTVTLKTVGLLTLMAQSGLHIPALSGSKIAV 372

Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
           FD I  DIGD QS+EQNLSTFS H++RI+DILE     +LVL+DEIG+GTDP+EG ALA 
Sbjct: 373 FDEIHGDIGDEQSIEQNLSTFSSHMTRIIDILETAQENNLVLLDEIGAGTDPTEGAALAM 432

Query: 455 SILQ--YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
           +IL+  Y R R+   + TTHY+ L     +    +NA+ EF +ETL+PTYR+  G  G S
Sbjct: 433 AILEELYSRGRIN-TIATTHYSQLKTFAYQQEGIQNASVEFDVETLQPTYRLQMGMPGRS 491

Query: 513 NALNIAKSIGFDRKIIQRA----------------------QKLVERLRPERQQHRKS-- 548
           NA  IA  +G   ++I++A                      Q +VE     R++ +K+  
Sbjct: 492 NAFEIAGRLGLPTEVIEKARAKLSEEDIEVDRIIQSIEESKQSIVENEEAARKERKKAKE 551

Query: 549 --ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
             E Y++ +EE  KLE + +  A   AE +     I +  K ++     +K K  +  QQ
Sbjct: 552 LKEEYETKLEEVEKLEQKIKKDAYAEAEKI-----IAESKKKVNEVVTEMKEK-AEVNQQ 605

Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
           E++ AK +ID    +  ++  D  +D     I+++              +D  V      
Sbjct: 606 EVDRAKSKIDEYKYNLSSERVDLESDLKQQRIQQN-------------SEDLEV------ 646

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
                 G++V +K L +K   ++E+  D +  ++Q G M+V V  + +  +  S ++  A
Sbjct: 647 ------GDKVRLKKL-NKEGEIIELSEDKEEAVIQAGPMKVNVDISRLEQMDESDQQTEA 699


>gi|168334894|ref|ZP_02693015.1| MutS2 family protein [Epulopiscium sp. 'N.t. morphotype B']
          Length = 793

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 188/608 (30%), Positives = 306/608 (50%), Gaps = 99/608 (16%)

Query: 47  IAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNC 106
           I G++ S   G++L+  ++    R L+  ++      E   +  +SLQR+   L     C
Sbjct: 80  IGGVIGS---GEILNIGKVLKTSRLLKKYSS-----EETTGITFNSLQRHFDSL-----C 126

Query: 107 NFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG-- 164
            +  ELE +I  CI     I  D  S++     +  +R M  L   +K     I Q+   
Sbjct: 127 TY-KELEYEIERCI-----IAEDEFSDEATPTLSNIRRQMTRLTIKVKDTIQNIIQSSQY 180

Query: 165 --GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 222
              + + ++T R  R C+ IKA+ K     GI  + S SGAT F+EP   VE NN    L
Sbjct: 181 KDXLQESIVTVRDGRQCIPIKAAQKTAF-KGIVHDTSGSGATVFIEPAAVVEMNNKIREL 239

Query: 223 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
            ++E  E   IL+  + +I+    E+      ++E+D+ FA++ +A  ++   P+L+ + 
Sbjct: 240 MSAEQDEIQVILATFSEKISFITEELLLTFKSIIELDIIFAKSEYALKINARXPVLNEKG 299

Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
           +      IN++G +HPLL  +++                                   VP
Sbjct: 300 Y------INLKGARHPLLNSTAV-----------------------------------VP 318

Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
           ID+ V  E   ++ITGPNTGGKT ++KT+GL ++M++ GL++PAK +  L  FD + A +
Sbjct: 319 IDVYVGKEFTTLLITGPNTGGKTVTLKTIGLFTIMAQCGLFIPAKENSELAIFDDVFAGL 378

Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
           GD QS+EQ+LSTFS H+  +++IL  ++  SL+L+DE+GSGTDP EG ALA SIL++LR 
Sbjct: 379 GDEQSIEQSLSTFSAHMMNLIEILADMTTNSLILLDELGSGTDPVEGAALAMSILEHLRK 438

Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
           +    V TTHY++L          ENA  EF ++ LRPTY++L G  G SNA  I+K +G
Sbjct: 439 QQITTVATTHYSELKLYALSTPNVENAGCEFDIQELRPTYKLLIGVPGKSNAFEISKKLG 498

Query: 523 FDRKIIQRAQ-----------------------KLVERLRPERQQHRKSELYQSLMEERR 559
           F   +I  A+                        LVE+    + +     L +S+ +ER+
Sbjct: 499 FPEHLIDDAKVFLQKENVKMEDILVELEYSKRTALVEKENALKFRQEAETLKESIKKERQ 558

Query: 560 KLE-SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE--LNFAKVQID 616
           KLE S+ +       +  +L RE+E E +++         KE +Q+ +E  +N  +  + 
Sbjct: 559 KLEVSRQKILKRAEEKGKELLREVEIETENI--------LKEVRQMARESLINVDENTLQ 610

Query: 617 TVVQDFEN 624
           ++ Q  +N
Sbjct: 611 SIKQKVQN 618


>gi|323490483|ref|ZP_08095690.1| MutS2 protein [Planococcus donghaensis MPA1U2]
 gi|323395887|gb|EGA88726.1| MutS2 protein [Planococcus donghaensis MPA1U2]
          Length = 786

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 216/715 (30%), Positives = 353/715 (49%), Gaps = 71/715 (9%)

Query: 17  LEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           + E  +LL Q      +++    + +  I DI      A  G  LSP E+  V  T+RA 
Sbjct: 41  INEVNRLLEQMDEGAQVLRVKNNVPMGGIFDIRLQARRAQIGGSLSPMELMEVSSTVRA- 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
           + + ++  E  + +G  + +    LE  ++   LT LE  I  CID    + LD AS +L
Sbjct: 100 SRILRQFFETIQEEG--VVQIPHFLEKKESMPILTALEHAINVCIDDNGGV-LDSASTEL 156

Query: 136 ELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
             IR     +  R  E L+SL++ K A+++     +   ++T R  R  + +K  ++   
Sbjct: 157 RSIRQQLRTQESRVRERLESLVRGKNASKM-----LSDSIVTIRNDRFVIPVKQEYRSHY 211

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  + SSSG T F+EP   V+ NN   RL   E  E   IL +L+A++ +   E+  
Sbjct: 212 -GGIVHDQSSSGQTLFIEPDSVVQANNEVRRLKMKEKEEIDRILMMLSAQVQEVAHELFV 270

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
           L+D + EIDL  A+A +     G  P ++++ +      IN++  +HP++          
Sbjct: 271 LVDVLGEIDLILAKAKYGSAHKGTKPTMNTEGY------INLKKARHPMI---------- 314

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P K +V                  VP DI+   +   +VITGPNTGGKT ++KT
Sbjct: 315 ------P-KEEV------------------VPNDIEFGRDITAIVITGPNTGGKTVTLKT 349

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           +GLA+LM+++GL +PA +   L  FD I ADIGD QS+EQ+LSTFS H+  IVDIL    
Sbjct: 350 VGLATLMAQSGLPVPALDGSELAVFDQIFADIGDEQSIEQSLSTFSSHMVNIVDILTKFD 409

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLV+ DE+G+GTDP EG ALA S+L  +  R    + TTHY +L           NA+
Sbjct: 410 ENSLVIFDELGAGTDPQEGAALAISLLDEVHGRGARVIATTHYPELKAYGFNRPGVANAS 469

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETL PTYR+L G  G SNA  I+K +G    II  A+                 +
Sbjct: 470 VEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLPEHIISHAKSFT-----GTDSKAVDSM 524

Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
             SL + RR+ E  A     + +E   L +E+  + ++ +++    + K  ++ ++ ++ 
Sbjct: 525 IASLEKSRREAEQDAERTQEVLSESEQLKKELAQQLEEYEQKKEQREEKAKEKARKIVDE 584

Query: 611 AKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
           A+ + ++V+ +    QL   S+ + + LI   +    A+     P++         +   
Sbjct: 585 ARAEAESVISELRKMQLNQGSSVKEHELINAKKRLDEAM-----PENRILKKAAKANEAK 639

Query: 670 P-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           P Q  ++V V S G K  T+VE    ++ + VQ G +++++ ++++      K+K
Sbjct: 640 PLQPNDEVKVISFGQK-GTLVEKVSKNEWI-VQIGILKMKLPESDLSFTKPEKQK 692


>gi|317473450|ref|ZP_07932744.1| MutS2 family protein [Anaerostipes sp. 3_2_56FAA]
 gi|316899100|gb|EFV21120.1| MutS2 family protein [Anaerostipes sp. 3_2_56FAA]
          Length = 799

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 215/723 (29%), Positives = 338/723 (46%), Gaps = 86/723 (11%)

Query: 26  QTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
           QT  AL  +  Q  +    ++D+   L        LS  E+  +   L AV N      +
Sbjct: 49  QTQDALTRLYKQGSISFFGVQDLGASLKRLKMKGTLSAGELLEIAGLLEAVKNALAYGAQ 108

Query: 85  AAEL-DGDSL----QRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
             ++ D DSL    +   P+  LLK+        E+I            D AS  L+ IR
Sbjct: 109 RDDMADADSLDSVFESLVPMDGLLKDIRHCIISPEEIS-----------DDASSALKDIR 157

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
              K   + + S L  + +       +   L+T R  R C+ +K  ++     G+  + S
Sbjct: 158 RNMKLTNQKIHSQLTAMVSSSSNKDMLQDALVTMRNGRYCIPVKQEYRGQFK-GMIHDQS 216

Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
           SSG+T F+EP   V  NN    L   E  E   IL+LL+ + +     +      ++++D
Sbjct: 217 SSGSTLFIEPMAVVTLNNQLKELEGQEQTEIERILALLSEQASYDMDSLAQNQKLLVQLD 276

Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
             FA+A +A+  +G  PI         D  INI+  +HPLL               +P K
Sbjct: 277 FIFAKAKYAKDYNGSKPIFRE------DGVINIKQGRHPLL---------------DPKK 315

Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
                                VPI++ +     ++VITGPNTGGKT S+KT+GL +LM +
Sbjct: 316 --------------------VVPINVSLGDAFSMLVITGPNTGGKTVSLKTVGLFTLMGQ 355

Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
           AGL++PA     L  ++ + ADIGD QS+EQNLSTFS H++ IV I++   R+SLVL+DE
Sbjct: 356 AGLHIPAFQGSSLGIYEEVFADIGDEQSIEQNLSTFSSHMTNIVSIIQNAHRDSLVLLDE 415

Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
           +  GTDP EG ALA SIL  L DR    + TTHY++L          ENA+ EF +ETL 
Sbjct: 416 LCGGTDPVEGAALAISILTDLHDRGVKTMATTHYSELKMFALSTNGVENASCEFDVETLS 475

Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 559
           PTYR++ G  G SNA  I++ +G D  II+ A   ++    +         +++++ +  
Sbjct: 476 PTYRLMIGIPGKSNAFAISRKLGLDNHIIEHASDQIDESVKD---------FETILAD-- 524

Query: 560 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE-------LNFAK 612
            LE   +T      EI +  +EIE   K L  R  ++K K  + +++        ++ AK
Sbjct: 525 -LEKSKQTIEQEQEEIFEYRKEIETLRKSLKERQENIKEKREKLLREAREEAYRIISEAK 583

Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP-- 670
              D  ++++ N+L+  S  + N  ++   S +   +     D  +      +    P  
Sbjct: 584 ETADETIKEY-NKLKKQSGKDANRKMEHMRSDLRGKMSGLEKDMAYRSKNRASKKHEPGD 642

Query: 671 -QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI---RPIPNSKRKNAA 726
            Q G++V+V SL     TV  +P     + VQ G MR ++   ++   + +   KR+NA 
Sbjct: 643 FQIGDEVYVTSLSLS-GTVQTLPNSKGDLYVQMGMMRSKINVKDLEITKSVKQVKRENAR 701

Query: 727 NPA 729
           N A
Sbjct: 702 NEA 704


>gi|311031396|ref|ZP_07709486.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. m3-13]
          Length = 785

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 223/727 (30%), Positives = 363/727 (49%), Gaps = 85/727 (11%)

Query: 9   AQIPFGKSLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           AQ+    + EE  K   QT  A  +++ +  + L  I DI G +  A  G  L+  E+  
Sbjct: 32  AQLTPATNYEEVVKRQLQTDEAATVLRLKGEVPLGGITDIRGHVKRAEIGGTLNTHELLD 91

Query: 68  VRRTLRAVNNVWKKLTEAAE--LDGD-SLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCK 123
           +  T+ A     +KL    E  LD D S+    P+L E +       ELE  I  CID +
Sbjct: 92  IAGTIYAA----RKLDRFVESVLDEDISI----PILKEYMDQLIIYPELERNIKNCID-E 142

Query: 124 LLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
              +LD AS+ L  IR + +    R  E L+S+++   AQ   +  I    IT R  R  
Sbjct: 143 YGEVLDGASDKLRGIRQQLRSTESRVREKLESMIRSSNAQKMLSDAI----ITIRNERYV 198

Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
           + +K  ++     GI  + SSSGAT F+EP+  V+ NN+       E  E   IL+ L+A
Sbjct: 199 IPVKQEYRSSY-GGIVHDQSSSGATLFIEPQQVVDLNNVLQEAKVKEKLEIDRILAELSA 257

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           ++A+  RE+   +  + EID  FA+A + + + G  P ++++ ++    +      +HPL
Sbjct: 258 DVAEVARELLENVHILAEIDFMFAKAKYGKHIRGTKPEINNEKYIRLVQA------RHPL 311

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                                     D  VP  I++  +   +VITGP
Sbjct: 312 IN-----------------------------------EDEVVPNTIELGKDYTSIVITGP 336

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL ++M+++GL++PA++   +  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 337 NTGGKTVTLKTLGLLTIMAQSGLHVPAQDGSEVGVFNAVYADIGDEQSIEQSLSTFSSHM 396

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
             IVDIL+ V  +SLVL DE+G+GTDP EG ALA SIL  +  R    + TTHY +L   
Sbjct: 397 VNIVDILKKVDHDSLVLFDELGAGTDPQEGAALAISILDEVYQRGACVIATTHYPELKAY 456

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
                   NA+ EF ++TL PTYR+L G  G SNA  I+K +G   ++I RA++ V    
Sbjct: 457 GYNRESVVNASVEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLSMEVIDRAKEFV---- 512

Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
                ++   +  SL   +++ E + R A  +      L+ ++E + ++L+ +   L  K
Sbjct: 513 -SEDSNKVENMIASLEASQKRAEEEWREAEKIRKTSQQLHEDLEQQMQELNEQRDKLYEK 571

Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD----EINSLIKESESAIAAIVEAHRPD 655
             ++ ++ +  AK + + V+++      +  A+    E+    K  E A+  + ++    
Sbjct: 572 AAEKAEKMVEDAKEEAEKVIRELRKMRMEQHANVKEHELIDAKKRLEGAVPTVKKS---- 627

Query: 656 DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI- 714
              +  +   S+ T + G++V V SL  K   +V+  GD +   VQ G M+++VK  +I 
Sbjct: 628 --AATKKQEVSNQTLEPGDEVKVMSLNQK-GHLVQKTGDKEW-QVQIGIMKMKVKTKDIQ 683

Query: 715 ---RPIP 718
              RP P
Sbjct: 684 YVSRPKP 690


>gi|376260578|ref|YP_005147298.1| MutS2 family protein [Clostridium sp. BNL1100]
 gi|373944572|gb|AEY65493.1| MutS2 family protein [Clostridium sp. BNL1100]
          Length = 792

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 218/720 (30%), Positives = 355/720 (49%), Gaps = 84/720 (11%)

Query: 21  QKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           +K+L++T+  ++ +++     L  I DI   L     G +LSP E+  +   LRA   + 
Sbjct: 44  EKMLSETNDGVSCVLKRGSPPLGGITDIRMTLKRLDMGGVLSPGELLRLAGVLRAARRLK 103

Query: 80  KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
             + +  +LD +     + L+  L++      LE+KI  CI  +  I  D AS  L  IR
Sbjct: 104 GYIND--KLDENKTNVVNELISCLESNQ---RLEQKIENCILSEDEIA-DNASPALSSIR 157

Query: 140 AERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
            + K       + L+S+++    Q F    I + ++T R  R  + +K  HK  +P G+ 
Sbjct: 158 RQIKEQQASIKDKLNSIIRSTKYQKF----IQESVVTMRGDRYVIPVKQEHKGDIP-GLV 212

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
            + S+SGAT F+EP   VE NN   +L   E  E   IL+ L+ + +    ++   M  +
Sbjct: 213 HDSSASGATLFIEPMAVVEANNSIKQLRVKEQTEIDRILAELSQDASLILPQLNANMSIM 272

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
             +D  FA+A  A     +CP       ++    I I+  +HPLL               
Sbjct: 273 ARLDFIFAKAKLAVDYKCICP------RINDTGKIIIKKGRHPLL--------------- 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
           +P K                     +PID  +  +   +++TGPNTGGKT S+KT+GL +
Sbjct: 312 DPQKV--------------------IPIDFWIGEKFSSLIVTGPNTGGKTVSLKTVGLFT 351

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM ++GL +PA     +  F+ I ADIGD QS+EQ+LSTFS H+  IVDIL  V+ +SL+
Sbjct: 352 LMVQSGLLVPANEGTEMSVFEKIYADIGDEQSIEQSLSTFSSHMKNIVDILSGVNNKSLI 411

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L+DE+G+GTDP+EG ALA SIL+ L       + TTHY++L       T  ENA+ EF +
Sbjct: 412 LLDELGAGTDPTEGAALAMSILESLHQMGATTLATTHYSELKVYAISTTGVENASCEFDV 471

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
           ETLRPTYR+L G  G SNA  I+K +G    II+R+++ +      ++  R  ++  S+ 
Sbjct: 472 ETLRPTYRLLIGVPGKSNAFAISKRLGLTDDIIERSKEFL-----SQEDIRFEDILLSIE 526

Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE----LNFA 611
           + R + E +   A S   E   L +++ED+     RR A  K  E ++ ++E    L  +
Sbjct: 527 KNRSEAEKEKMRAESYRQEAERLKKDLEDQK----RRLAAQKESELRKAREEARRILTDS 582

Query: 612 KVQIDTVVQDFENQLRDASADEINSLIKESESAIA--------AIVEAHRPDDDFSVSET 663
           K Q D +V + +   ++    E+    +E    +         ++VE+  P         
Sbjct: 583 KHQADELVSEMKRLAKEQEEAEVRRQTEELRQRLNKSINNLDDSLVESIMPRQGLVKPPK 642

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           N     P  G+ V + +L  K  T++ +P  +    VQ G M++ V  +N++ +   K++
Sbjct: 643 N---LKP--GDTVLIVNLNQK-GTILSLPDKNGEAQVQAGIMKINVHISNLKLVDEQKQQ 696


>gi|334188381|ref|NP_200220.2| DNA mismatch repair protein MutS, type 2 [Arabidopsis thaliana]
 gi|332009066|gb|AED96449.1| DNA mismatch repair protein MutS, type 2 [Arabidopsis thaliana]
          Length = 796

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 239/770 (31%), Positives = 374/770 (48%), Gaps = 103/770 (13%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIED--IAGILNSAVS 56
           +G    +K      +S  ES KLL++T AA+ M++  S  LDLS+I    +   +  A  
Sbjct: 72  LGREATKKKLWSLDQSFSESLKLLDETDAAIKMLEHGSFCLDLSSIHISLVESGIRHAKR 131

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLK----NCNFLTEL 112
              L   +   V   LR   N+   L  A + DGD  +R+ PL EL+     N +F+  +
Sbjct: 132 RLSLRADQALEVASLLRFFENLQLDLKAAIKQDGDWYKRFMPLSELIVHPVINRSFVKLV 191

Query: 113 EEKI---GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
           E+ I   G         I D AS  L   R  R+R ++ L+  L+++   I ++   D+ 
Sbjct: 192 EQVIDPDG--------TIKDSASSAL---RQSRER-VQTLERKLQQLLDAIIRSQKDDES 239

Query: 170 LITKRR--SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
           ++       R C  I+ S   L      L  S SG     EP  AV  N+ +++ + + +
Sbjct: 240 VMLAAEIDGRWC--IQMSSNQLTSVNGLLLSSGSGGGTAAEPIAAVSMND-DLQSARASV 296

Query: 228 AE-ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP--ILSSQSHV 284
           A+ E  ILS+LT ++     +I+ ++   +++D+  ARA +++   G  P   L  +  V
Sbjct: 297 AKAEAEILSMLTEKMQDGLCQIEVVLSYSIQLDVINARATYSRAYGGAHPDIYLPPEDEV 356

Query: 285 SFDSS------INIEGIK---------------HPLLLGSSLRSLSAASSNSNPLKSDVE 323
              S+      IN+   K               HPLLL    + +          K    
Sbjct: 357 ESLSAGENSPDINLPSEKPLSKKEWLLYLPRCYHPLLLYQHKKGIRKTRETVKFHK---- 412

Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
               T  ++  G    P+P D ++   TRV+VITGPNTGGKT  +K++GLA++M+K+GLY
Sbjct: 413 ----TADTVLSGAP--PIPADFQISKGTRVLVITGPNTGGKTICLKSVGLAAMMAKSGLY 466

Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
           + A    R+PWFD I ADIGD QSL Q+LSTFSGH+ +I +IL   +  SLVL+DE+G+G
Sbjct: 467 VLATESARIPWFDNIYADIGDEQSLLQSLSTFSGHLKQISEILSHSTSRSLVLLDEVGAG 526

Query: 444 TDPSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
           T+P EG AL  +IL+   +    L + TTH+ +L  LK  ++ FENA  EF    L+PTY
Sbjct: 527 TNPLEGAALGMAILESFAESGSLLTMATTHHGELKTLKYSNSAFENACMEFDDLNLKPTY 586

Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ-----HRKSELYQSLMEE 557
           +ILWG  G SNA+NIA  +G    II+ A++L      E  +      R  + YQ L+ E
Sbjct: 587 KILWGVPGRSNAINIADRLGLPCDIIESARELYGSASAEINEVILDMERYKQEYQRLLNE 646

Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
            R      R +  LH  ++   + I D +            KE ++++QEL  A     +
Sbjct: 647 SRVY---IRLSRELHENLLTAQKNINDHS-----------TKERRKMRQELTQAGSMTRS 692

Query: 618 VVQDFENQLRDASADEINSLIKESESAIAAIVEAH---RPDDDFSVSETNT--------- 665
            ++    Q R ++        K S+S +A  ++       D+D  +  ++          
Sbjct: 693 TLRRTLQQFRSSAG-------KSSQSKVATQLQTKVKTTKDEDNGIRSSSVVERRPLPEA 745

Query: 666 -SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
            +   P+ G  V V SLG K ATV++V      +LVQ G M+++VK  ++
Sbjct: 746 AAQKVPEVGSSVFVSSLGKK-ATVLKVEHSKKEILVQVGIMKMKVKLTDV 794


>gi|357057959|ref|ZP_09118816.1| hypothetical protein HMPREF9334_00533 [Selenomonas infelix ATCC
           43532]
 gi|355374536|gb|EHG21830.1| hypothetical protein HMPREF9334_00533 [Selenomonas infelix ATCC
           43532]
          Length = 784

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 221/719 (30%), Positives = 353/719 (49%), Gaps = 92/719 (12%)

Query: 8   KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           ++ IP G   +E  +L ++T+ A+ + Q+Q      I D+  +L  A  G +L   E+ +
Sbjct: 32  RSVIPSG-DYDEVVRLHHETAEAVQVQQTQSPPFGGIYDLRTLLKKASMGAVLEIDELRS 90

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNC--NFLTELEEKIGFCIDCKLL 125
           V  T+  + NV K       LD   L+  +  +E+L     +    ++E   F  D    
Sbjct: 91  VMSTMCGMRNV-KYFFRDLVLDVPHLKTMAKPIEILGMVERHLKDTIDEHGNFRDDASPE 149

Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
             L R + +L+  +A   R  E L ++L   A Q +      + ++T R  R  + +K  
Sbjct: 150 --LRRITRELQTAQA---RVKERLSAILHDAANQKY----FQEAIVTVRDERYVIPVKQE 200

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           ++   P G+  + S+SGAT F+EP   VE NN   ++  +   E   IL  L+ EIA++ 
Sbjct: 201 YRNYFP-GVIHDQSASGATLFVEPLATVELNNTVRQMGLAREQEIQRILQKLSTEIAQNA 259

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
             +      + E+DL FARAG A+ M    P L+ QS V     ++++  +HPLL     
Sbjct: 260 GILSENCTILSEMDLIFARAGLAREMQAYPPTLN-QSGV-----VHLKRARHPLL----- 308

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                      P                    D  VPIDI++     +++ITGPNTGGKT
Sbjct: 309 -----------P-------------------KDKVVPIDIELGQNFSILLITGPNTGGKT 338

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            SMKTLGL +L++++G +LP      +P +  I ADIGD QS+EQ+LSTFS H   IV I
Sbjct: 339 VSMKTLGLLALLAQSGCFLPTAPDSEIPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVRI 398

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDT 484
           ++   +  L+L+DE+G+GTDP EG ALA SI+ +   + G+AVV TTHYA L      ++
Sbjct: 399 IDKAEQGDLILLDEVGAGTDPDEGAALARSIIAHFLQQ-GIAVVATTHYAVLKTYAYAES 457

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
             ENA+ EF L+TLRPTYR+L G  G SNA +I++ +G  + I+ RA+  +       ++
Sbjct: 458 GIENASVEFDLKTLRPTYRLLIGIPGASNAFSISRQLGLPQDIVARAEIYIS------EE 511

Query: 545 HRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
           H   E +   L  E++  E++ R   +  AEI  +   +  E + L      L  K  ++
Sbjct: 512 HTHFEHVVNELEREKQDYETKNRELRNKEAEIKSVEARLRAERETLSNTRQELLHKAREE 571

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI------------AAIVEA 651
               +  A+   +  ++  ++Q  D    E   +I+E+ + +             A+ + 
Sbjct: 572 ANNIVREARRSAEETIKSLKDQFDDHGVKERRKVIQEARNRLDEAYIQDSLQKNPAVGKT 631

Query: 652 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
            RPDD  S             G+ V+++SL  +  TV+ V G + T  VQ G +R  VK
Sbjct: 632 IRPDDIRS-------------GDIVYIESLAQE-GTVLSVQGKELT--VQVGGLRTIVK 674


>gi|153955797|ref|YP_001396562.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium kluyveri DSM 555]
 gi|219856164|ref|YP_002473286.1| hypothetical protein CKR_2821 [Clostridium kluyveri NBRC 12016]
 gi|229486370|sp|A5N245.1|MUTS2_CLOK5 RecName: Full=MutS2 protein
 gi|254766597|sp|B9E5U7.1|MUTS2_CLOK1 RecName: Full=MutS2 protein
 gi|146348655|gb|EDK35191.1| MutS-related protein [Clostridium kluyveri DSM 555]
 gi|219569888|dbj|BAH07872.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 786

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 224/723 (30%), Positives = 356/723 (49%), Gaps = 86/723 (11%)

Query: 24  LNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           L +T  AL ++ S+   P D   + D+   +  A  G +L P++I  +   L+A     K
Sbjct: 47  LEETEEALKLIISRGNPPFD--GVYDVRQGVKMAQKGSILMPAQIFRIGAILKASRRFEK 104

Query: 81  KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
            +    E +G     +  + ++ +    L  LE+KI   I+ +  I  DRAS  L  IR 
Sbjct: 105 YIKAKGEGEG-----FRIIEDICQGIVLLKGLEDKIFISIESEDEI-SDRASSLLYNIRK 158

Query: 141 E-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
             R +N    + ++SL++  ++ +         L T R  R  + ++A +K L+P G+  
Sbjct: 159 SIRDKNASVRDKVNSLIRNYSSYL------QDNLYTIRGDRYVLPVRAENKALVP-GLVH 211

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + SSSG+T ++EP   V  NN    L   E AE   IL  L+ EI  +   IK   D + 
Sbjct: 212 DQSSSGSTLYIEPMALVNLNNEIKELKLKEKAEIDRILYELSKEIHDNIVVIKNNADIIW 271

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           E+D  FA+A F   ++G  PI++    +       +EG +HPL+                
Sbjct: 272 ELDFIFAKAKFGSELNGNIPIVNDNCIIDI-----VEG-RHPLI---------------- 309

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                      TV           VP+D+ +  +   +VITGPNTGGKT ++KT+GL  +
Sbjct: 310 --------DRKTV-----------VPMDVYMGKDFTCLVITGPNTGGKTVALKTMGLLHI 350

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+ +GL +PA+ +  + +F  I ADIGD QS+EQNLSTFS H++ I++I+     +SL+L
Sbjct: 351 MALSGLMIPARENSTVGFFTEIFADIGDEQSIEQNLSTFSSHMTNIINIINNSDEKSLIL 410

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP+EG ALA SIL+ L+DR  + V TTHY++L     K    ENA+ EF ++
Sbjct: 411 FDELGAGTDPTEGAALAVSILENLKDRGSMIVATTHYSELKAYALKSNGVENASVEFDVD 470

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
           TL+PTY+++ G  G SNA  I+K +G    II+ A++ +  E L+ E       +L QSL
Sbjct: 471 TLKPTYKLMIGIPGKSNAFEISKRLGLPEFIIKAARENIASEALKFE-------DLIQSL 523

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIE------DEAKDLDRRAAHLKAKETQQVQQEL 608
            E+R K E+  R A  L  E   +  + E       E +D     AH KA+E  +  +E 
Sbjct: 524 QEKRIKAENYFREAEILKREAAKIKEKYEQKAIRLQEVRDKSITEAHRKAREIIRESKE- 582

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
                + D +++D     +   +  +   ++E    +   +E    +   + SE      
Sbjct: 583 -----EADRILKDIRELEKMGYSSSVKHELEERRKMLKDKLENVEENLYKAKSEDGQRLK 637

Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
           + + GE+V + SL  K+  V+  P +   V VQ G M++ V    +R  P    KN    
Sbjct: 638 SVKEGEEVFIPSLNQKV-LVLSKPDNKGEVQVQAGIMKISVNLKELRA-PKGSTKNTDKK 695

Query: 729 APR 731
             R
Sbjct: 696 LKR 698


>gi|389819500|ref|ZP_10209368.1| MutS2 protein [Planococcus antarcticus DSM 14505]
 gi|388463298|gb|EIM05662.1| MutS2 protein [Planococcus antarcticus DSM 14505]
          Length = 786

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 217/718 (30%), Positives = 354/718 (49%), Gaps = 77/718 (10%)

Query: 17  LEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           + E  +LL Q      +++    + +  I DI      A  G  LSP E+  V  T+RA 
Sbjct: 41  INEVNRLLEQMDEGAQVLRVKNNVPMGGIFDIRLHARRAQIGGSLSPMELMEVSSTIRA- 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
           + + ++  E   +  +++ +    LE  ++   LT LE  I  CID    + LD AS +L
Sbjct: 100 SRILRQFFET--IKEEAVIQIPHFLEKKESMPILTVLEHAINICIDDNGGV-LDSASSEL 156

Query: 136 ELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
             IR     +  R  E L+SL++ K A+++     +   ++T R  R  + +K  ++   
Sbjct: 157 RSIRQQLRTQESRVRERLESLVRGKNASKM-----LSDSIVTIRNDRFVIPVKQEYRNHY 211

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  + SSSG T F+EP   V+ NN   RL   E  E   IL +L+A++ +   E+  
Sbjct: 212 -GGIVHDQSSSGQTLFIEPDVVVQANNEVRRLKMKEKEEIDRILLMLSAQVQEVAHELFL 270

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
           L++ + EIDL  A+A +     G  P ++++ +      IN++  +HPL+          
Sbjct: 271 LVEVLGEIDLILAKAKYGAAHKGTKPTMNTEGY------INLQKARHPLI---------- 314

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P                    D  VP DI+   +   +VITGPNTGGKT ++KT
Sbjct: 315 ------P-------------------KDEVVPNDIEFGGDITAIVITGPNTGGKTVTLKT 349

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           +GL++LM+++GL +PA +   L  FD I ADIGD QS+EQ+LSTFS H+  IVDIL    
Sbjct: 350 VGLSTLMAQSGLPVPALDGSELSVFDQIFADIGDEQSIEQSLSTFSSHMVNIVDILTKFD 409

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLV+ DE+G+GTDP EG ALA S+L  +  R    + TTHY +L           NA+
Sbjct: 410 ENSLVIFDELGAGTDPQEGAALAISLLDEVHGRGARVIATTHYPELKAYGYNRPGVANAS 469

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETL PTYR+L G  G SNA  I+K +G    II  A+                 +
Sbjct: 470 VEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLPEHIINHAKSFT-----GTDSKAVDSM 524

Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
             SL + RR+ E  A     + +E   L +E+  + ++ +++   L+ K  ++ ++ +  
Sbjct: 525 IASLEKSRREAEQDAEQTKKILSESEQLKKELAKQLEEYEQQKERLEEKAKEKARKIVGQ 584

Query: 611 AKVQIDTVVQDFEN-QLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETNTS 666
           A+V+ + V+ D    QL  +S+ + + LI   K  E+A+        P +         +
Sbjct: 585 ARVEAEAVISDLRKMQLNQSSSVKEHELIDAKKRLENAL--------PQNRILKKAAKDN 636

Query: 667 SFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           +  P +  ++V V S G K  T+VE    ++ + VQ G +++++ ++++      K+K
Sbjct: 637 AEKPLKANDEVKVISFGQK-GTLVEKVSKNEWI-VQIGILKMKLPESDLSYTKPEKQK 692


>gi|52081359|ref|YP_080150.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           licheniformis DSM 13 = ATCC 14580]
 gi|404490236|ref|YP_006714342.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           licheniformis DSM 13 = ATCC 14580]
 gi|81690944|sp|Q65GE2.1|MUTS2_BACLD RecName: Full=MutS2 protein
 gi|52004570|gb|AAU24512.1| DNA mismatch repair protein MutSB [Bacillus licheniformis DSM 13 =
           ATCC 14580]
 gi|52349238|gb|AAU41872.1| DNA mismatch repair protein MutS [Bacillus licheniformis DSM 13 =
           ATCC 14580]
          Length = 785

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 223/727 (30%), Positives = 359/727 (49%), Gaps = 81/727 (11%)

Query: 15  KSLEESQKL---LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
           +SLEE +KL   +++    L +  S P     + DI   L  A  G +LSP+E+  +   
Sbjct: 38  RSLEEVKKLQEEVDEAGTVLRLKGSAPF--GGLTDIRKALRRAEIGSILSPAELTEISGL 95

Query: 72  LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           L A   + K   E    DG  +       E L     L+ELE  I  CID    + LD A
Sbjct: 96  LYAAKQM-KHFLEGLFEDGVEIPYLHQYAEKLIP---LSELERDINSCIDDHGEV-LDHA 150

Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
           SE L  IR + +    R  + L+S+L+  +AQ      +   +IT R  R  + +K  ++
Sbjct: 151 SETLRGIRTQLRTLESRIRDRLESMLRSSSAQKM----LSDTIITIRNDRFVIPVKQEYR 206

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
                GI  + SSSGAT F+EP+  V+ NN   +   +E  E   IL +LT + A+   E
Sbjct: 207 SSY-GGIVHDQSSSGATLFIEPQAIVDMNNALRQAKVNEKQEIERILRVLTEKTAEHTNE 265

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           + + +  +  +D  FA+A +A+    V P +++  +V    +      +HPLL       
Sbjct: 266 LFHDVKVLQTLDFIFAKAKYAKATKAVKPAVNADGYVRLIQA------RHPLL------- 312

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                    PL                   D  VP DI++  E   +VITGPNTGGKT +
Sbjct: 313 ---------PL-------------------DEVVPNDIELGGEYTTIVITGPNTGGKTVT 344

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KTLGL ++M+++GL++PA+       FD + ADIGD QS+EQ+LSTFS H+  IVDIL+
Sbjct: 345 LKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILK 404

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
            ++  SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           
Sbjct: 405 DMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTGARVIATTHYPELKAYGYNRENVI 464

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NA+ EF ++TL PTY++L G  G SNA  I+K +G    +I RA     +     + +  
Sbjct: 465 NASVEFDIDTLSPTYKLLIGVPGRSNAFEISKRLGLPDYLIGRA-----KAEMTAEHNEV 519

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
             +  SL + +++ E++ +   ++ AE   L+R+++ +  +   +   L  +  Q+  ++
Sbjct: 520 DTMIASLEDSKKRAEAELKETEAIRAEAEALHRDLQQQISEWQEKKDKLYEEAEQKAAEK 579

Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETN 664
           +  A  + D ++Q       D  A + + LI   K  E A+ +  +A +P    +  +T+
Sbjct: 580 VKAAMKEADDIIQSLRMIKEDHKAFKDHELIEAKKRLEEAVPSFEKAKKP----AQKKTD 635

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-----PIPN 719
                P  G++V V + G K  T++E  G  +   VQ G ++++VK+ ++      P P 
Sbjct: 636 KRELKP--GDEVKVLTFGQK-GTLLEKTGAAEWN-VQIGILKMKVKEKDLEFLKSAPEPE 691

Query: 720 SKRKNAA 726
            ++  AA
Sbjct: 692 KQKTIAA 698


>gi|384547383|ref|YP_005736636.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|417904179|ref|ZP_12548009.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21269]
 gi|298694432|gb|ADI97654.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|341848002|gb|EGS89171.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21269]
          Length = 782

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 353/709 (49%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++  N       +  E D D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYNQLVEEDEDV--KYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|319647266|ref|ZP_08001488.1| MutS2 protein [Bacillus sp. BT1B_CT2]
 gi|317390613|gb|EFV71418.1| MutS2 protein [Bacillus sp. BT1B_CT2]
          Length = 785

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 223/727 (30%), Positives = 359/727 (49%), Gaps = 81/727 (11%)

Query: 15  KSLEESQKL---LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
           +SLEE +KL   +++    L +  S P     + DI   L  A  G +LSP+E+  +   
Sbjct: 38  RSLEEVKKLQEEVDEAGTVLRLKGSAPF--GGLTDIRKALRRAEIGSILSPAELTEISGL 95

Query: 72  LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           L A   + K   E    DG  +       E L     L+ELE  I  CID    + LD A
Sbjct: 96  LYAAKQM-KHFLEGLFEDGVEIPYLHQYAEKLIP---LSELERDINSCIDDHGEV-LDHA 150

Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
           SE L  IR + +    R  + L+S+L+  +AQ      +   +IT R  R  + +K  ++
Sbjct: 151 SETLRGIRTQLRTLESRIRDRLESMLRSSSAQKM----LSDTIITIRNDRFVIPVKQEYR 206

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
                GI  + SSSGAT F+EP+  V+ NN   +   +E  E   IL +LT + A+   E
Sbjct: 207 SSY-GGIVHDQSSSGATLFIEPQAIVDMNNALRQAKVNEKQEIERILRVLTEKTAEHTNE 265

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           + + +  +  +D  FA+A +A+    V P +++  +V    +      +HPLL       
Sbjct: 266 LFHDVKVLQTLDFIFAKAKYAKATKAVKPAVNADGYVRLIQA------RHPLL------- 312

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                    PL                   D  VP DI++  E   +VITGPNTGGKT +
Sbjct: 313 ---------PL-------------------DEVVPNDIELGGEYTTIVITGPNTGGKTVT 344

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KTLGL ++M+++GL++PA+       FD + ADIGD QS+EQ+LSTFS H+  IVDIL+
Sbjct: 345 LKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILK 404

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
            ++  SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           
Sbjct: 405 DMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTGARVIATTHYPELKAYGYNRENVI 464

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NA+ EF ++TL PTY++L G  G SNA  I+K +G    +I RA     +     + +  
Sbjct: 465 NASVEFDIDTLSPTYKLLIGVPGRSNAFEISKRLGLPDYLIGRA-----KAEMTAEHNEV 519

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
             +  SL + +++ E++ +   ++ AE   L+R+++ +  +   +   L  +  Q+  ++
Sbjct: 520 DTMIASLEDSKKRAEAELKETEAIRAEAEALHRDLQQQISEWQEKKDKLYEEAEQKAAEK 579

Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETN 664
           +  A  + D ++Q       D  A + + LI   K  E A+ +  +A +P    +  +T+
Sbjct: 580 VKAAMKEADDIIQSLRMIKEDHKAFKDHELIEAKKRLEEAVPSFEKAKKP----AQKKTD 635

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-----PIPN 719
                P  G++V V + G K  T++E  G  +   VQ G ++++VK+ ++      P P 
Sbjct: 636 KRELKP--GDEVKVLTFGQK-GTLLEKTGAAEWN-VQIGILKMKVKEKDLEFLKSAPEPE 691

Query: 720 SKRKNAA 726
            ++  AA
Sbjct: 692 KQKTIAA 698


>gi|420155006|ref|ZP_14661877.1| MutS2 family protein [Clostridium sp. MSTE9]
 gi|394759848|gb|EJF42511.1| MutS2 family protein [Clostridium sp. MSTE9]
          Length = 802

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 229/715 (32%), Positives = 357/715 (49%), Gaps = 85/715 (11%)

Query: 16  SLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSE---ICAVRR 70
           S +E ++ L +T  A  +M     P   S ++++A  L  A +G +L+  +   I  V R
Sbjct: 52  STDEVRRRLQETDDAFVLMAKFGSP-SFSGLKNVANPLRRAQAGGVLNLVDFLRIAGVLR 110

Query: 71  TLRAVNNVWKKLTEAAELDGD-SLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
           T+RA+++ W++ +E  +   D   +   P   L +  N +   EE++      +L  I  
Sbjct: 111 TMRAISD-WRRKSEGMKTTLDWRFESVVPNKYLEEKINAVVISEEEVADNASPELASIRR 169

Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
           R       +R       E LD +++  A Q +    +  P++T R  R  V +KA  +  
Sbjct: 170 RIRAASSRVR-------EQLDKMIRSAAYQKY----LQDPIVTMRGGRYVVPVKAECRGE 218

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEIAKSEREI 248
           +P G+  + SSSGAT F+EP G VE NN E+R L + E AE   IL+ L+AE       I
Sbjct: 219 IP-GLVHDTSSSGATVFVEPMGVVEANN-EIRVLQSRESAEIERILAELSAEAGGFADLI 276

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
                  + +DL FA+   A  M    P ++    +  + +      +HPL+        
Sbjct: 277 IESYHAAVGLDLIFAKGQLAYKMKASMPKVNDTGRILLNQA------RHPLI-------- 322

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                  +P +                     VP++I++      +VITGPNTGGKT ++
Sbjct: 323 -------DPKQV--------------------VPMNIELGTTFDTLVITGPNTGGKTVTL 355

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KTLGL +LM+  GL LP  ++  +  F  +LADIGD QS+EQ+LSTFS H++ I+ I+E 
Sbjct: 356 KTLGLLTLMAMCGLMLPVGDNSEISVFHQVLADIGDEQSIEQSLSTFSAHMTNIIQIIEQ 415

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
               SL+L+DE+G+GTDP EG ALA +IL+ LR+R      TTHYA+L     +    EN
Sbjct: 416 ADERSLILLDELGAGTDPVEGAALAMAILEALRERHARVAATTHYAELKAYALQTAGVEN 475

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
            + EF + TLRPTYR+L G  G SNA  I+  +G +++I+ RA++LV       +  R  
Sbjct: 476 GSCEFDVATLRPTYRLLIGVPGRSNAFAISSRLGLNQEIVDRARELV-----SGEDRRFE 530

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ--- 605
           ++ Q+L + R+KLE++ R A   +AE     R I +EA++   R     AKE +Q +   
Sbjct: 531 DVVQNLEQSRQKLEAERRQAQEQNAE----ARRISEEAREYRERLEREAAKEIEQARERA 586

Query: 606 -QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSET 663
            Q +   + Q D ++++ E   R  +     S+  E  + + A + +     D  S  E 
Sbjct: 587 AQLVARTRAQADALLEELEEMKRQGA----KSMTAEQRARMKAGMRDMESASDPVSRKEP 642

Query: 664 NTSSFTPQF--GEQVHVKSLGDKLATVVEVPG-DDDTVLVQYGKMRVRVKKNNIR 715
            T         G+ V +  + DK  TVVE P  DD  VLVQ G ++ RV   N+R
Sbjct: 643 ETYVLPRPLKAGDDVLIFDI-DKEGTVVETPAPDDKKVLVQAGIIKTRVPVENLR 696


>gi|326201810|ref|ZP_08191681.1| LOW QUALITY PROTEIN: MutS2 family protein [Clostridium
           papyrosolvens DSM 2782]
 gi|325988410|gb|EGD49235.1| LOW QUALITY PROTEIN: MutS2 family protein [Clostridium
           papyrosolvens DSM 2782]
          Length = 792

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 216/720 (30%), Positives = 354/720 (49%), Gaps = 84/720 (11%)

Query: 21  QKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           +K+L++T+  ++ +++     L  I DI   L     G +L+P E+  +   LRA   + 
Sbjct: 44  EKMLSETNDGVSCVLKRGSPPLGGITDIRLTLKRLDMGGVLNPGELLRLAGVLRAARRLK 103

Query: 80  KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
             + +   LD +       L+  L++      LE+KI  CI  +  I  D AS  L  IR
Sbjct: 104 GYIND--RLDDNKTNVVHELISCLESNQ---RLEQKIDSCILSEDEIA-DSASPALSSIR 157

Query: 140 AERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
            + K       + L+S+++    Q F    I + ++T R  R  + +K  HK  +P G+ 
Sbjct: 158 RQIKEQQASIKDRLNSIIRSTKYQKF----IQESVVTMRGDRYVIPVKQEHKGDIP-GLV 212

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
            + S+SGAT F+EP   VE NN   +L   E  E   IL+ L+ + +    ++   M  +
Sbjct: 213 HDSSASGATLFIEPMAVVEANNSIKQLRVKEQTEIDRILAELSQDASLILPQLNANMSIM 272

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
             +D  FA+A  A     +CP+++          I I+  +HPLL               
Sbjct: 273 ARLDFIFAKAKLAVDYKCICPVINDTG------KIIIKKGRHPLL--------------- 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
           +P K                     +PID  +  +   +++TGPNTGGKT S+KT+GL +
Sbjct: 312 DPQKV--------------------IPIDFWIGDKFSSLIVTGPNTGGKTVSLKTVGLFT 351

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM ++GL +PA     +  F+ I ADIGD QS+EQ+LSTFS H+  IVDIL+ V+ +SL+
Sbjct: 352 LMVQSGLLIPANEGTEMSVFEKIYADIGDEQSIEQSLSTFSSHMKNIVDILDGVNNKSLI 411

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L+DE+G+GTDP+EG ALA SIL+ L       + TTHY++L          ENA+ EF +
Sbjct: 412 LLDELGAGTDPTEGAALAMSILESLHRMGATTLATTHYSELKVYAISTAGVENASCEFDV 471

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
           ETLRPTYR+L G  G SNA  I+K +G    II+R+++ +      ++  R  ++  S+ 
Sbjct: 472 ETLRPTYRLLIGVPGKSNAFAISKRLGLTDDIIERSKEFL-----SQEDIRFEDILLSIE 526

Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE----LNFA 611
           + R + E +   A S   E   L +++ED+     RR A  K  E ++ ++E    L  +
Sbjct: 527 KNRSEAEKEKMRAESYRQEAERLKKDLEDQK----RRLATQKESELRKAREEARRILTDS 582

Query: 612 KVQIDTVVQDFENQLRDASADEINSLIKESESAIA--------AIVEAHRPDDDFSVSET 663
           K Q D +V + +   ++    E+    +E    +         ++VE+  P         
Sbjct: 583 KHQADELVSEMKRLAKEQEEAEVRRQTEELRQRLNKSINKLDDSLVESIMPRQGLVKPPK 642

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           N     P  G+ V + +L  K  T++ +P  +    VQ G M++ V  +N++ +   K++
Sbjct: 643 N---LKP--GDTVLIVNLNQK-GTILAIPDKNGEAQVQAGIMKINVHISNLKLVDEQKQQ 696


>gi|291533994|emb|CBL07107.1| Mismatch repair ATPase (MutS family) [Megamonas hypermegale
           ART12/1]
          Length = 611

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 193/633 (30%), Positives = 317/633 (50%), Gaps = 67/633 (10%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
           MG  + +K  +P     E  + L +   A+  ++ S+P     I DI  +L     G ++
Sbjct: 26  MGKELAEKL-LPSSDIDEVIENLSHTQEASNILISSEP-PFGGIHDIRSLLKKTSLGLVI 83

Query: 61  SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
             + +  +  T+ A+ N+ KK  +  E+D    + ++  +E+L       +LE +I   +
Sbjct: 84  EINSLLDILNTMYAMRNL-KKFFKELEIDSPQFKEWAKSIEIL------GQLEREIDNIV 136

Query: 121 DCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
           D +   + D AS +L  IR E    ++R   NLD +LK    Q +    I    +T R  
Sbjct: 137 D-EHGSMRDSASVELMRIRREIKSSQRRIKTNLDGILKNPDYQKYFQDNI----VTIRDE 191

Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
           R  + IK  ++   P G+  + SSSG+T F+EP   V+ NN   +L   E  E   IL +
Sbjct: 192 RYVIPIKQEYRQQFP-GVVHDQSSSGSTLFIEPMSIVDLNNDIKQLVIDEKREIERILKV 250

Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
           ++ +IA++   + +  + + ++D AFA+A  A+ M    P       ++ +  +N+   +
Sbjct: 251 ISEKIARNADSLLHNCEIMAQLDFAFAKAKLARKMHATMP------EINDEGIVNLAKAR 304

Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
           HPLL                                     D  VPIDI++    R ++I
Sbjct: 305 HPLL-----------------------------------NKDNVVPIDIRLGEGYRTLLI 329

Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
           TGPNTGGKT SMKTLGL  LM+++GL++P ++  ++  F  + ADIGD QS+EQ+LSTFS
Sbjct: 330 TGPNTGGKTVSMKTLGLLVLMTQSGLFIPVQSGSKISIFQNVYADIGDEQSIEQSLSTFS 389

Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
            H+  IV+IL  +  + L+L+DE+GSGTDP EG ALA SIL+ L +     V TTHY +L
Sbjct: 390 AHMRNIVNILNNIEHDDLLLLDEVGSGTDPEEGAALAMSILERLMEIGACTVATTHYNEL 449

Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
                     ENA  EF +++LRPTYR+L G+ G SNA  I+K +G    +I RAQ+L+ 
Sbjct: 450 KTFAYSKEGIENACVEFDIKSLRPTYRLLIGTPGASNAFAISKRLGLSDTLILRAQQLI- 508

Query: 537 RLRPERQQHRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
                +  H + E +  +L  E+   E +    A     I  L +++ D  +++ ++   
Sbjct: 509 -----KADHAQFENVLNTLENEKLMYEQKNADIAERQQRIEKLEKQLADMKQEMAKKKEQ 563

Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
              K  +Q    L   + + + ++++ + Q  D
Sbjct: 564 TLRKTKEQCASLLRRTRRESEEIIKELKAQFND 596


>gi|220928895|ref|YP_002505804.1| MutS2 family protein [Clostridium cellulolyticum H10]
 gi|254766596|sp|B8I1Z8.1|MUTS2_CLOCE RecName: Full=MutS2 protein
 gi|219999223|gb|ACL75824.1| MutS2 family protein [Clostridium cellulolyticum H10]
          Length = 792

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 217/720 (30%), Positives = 356/720 (49%), Gaps = 84/720 (11%)

Query: 21  QKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           +K+L++T+  ++ +M+     L  I DI   L     G +L+P E+  +   LRA   + 
Sbjct: 44  EKMLSETNDGVSCIMRRGSPPLGGITDIRMSLKRLDMGGVLNPGELLRLAGVLRAARRLK 103

Query: 80  KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
             + +  +LD ++      L+  L++      LE+KI  CI  +  I  D AS  L  IR
Sbjct: 104 GYIND--KLDENNASVVKELISCLESNQ---RLEQKIDNCILSEDEIA-DNASPALSSIR 157

Query: 140 AERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
            + K       + L+S+++    Q +    I + ++T R  R  + +K  HK  +P G+ 
Sbjct: 158 RQIKEQQASIKDKLNSIIRSTKYQKY----IQESVVTMRGDRYVIPVKQEHKGDIP-GLV 212

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
            + S+SGAT F+EP   VE NN   +L   E  E   IL+ L+ + +    ++   M  +
Sbjct: 213 HDSSASGATLFIEPMAVVEANNSIKQLRVKEQTEIDRILAELSQDASLVLPQLNANMSIM 272

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
             +D  FA++  A   + +CP       ++    I I+  +HPLL               
Sbjct: 273 ARLDFIFAKSKLAIDYNCICP------KINDTGKIIIKKGRHPLL--------------- 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
           +P                       VPID  +  +   +++TGPNTGGKT S+KT+GL +
Sbjct: 312 DP--------------------KIVVPIDFWIGEKFSSLIVTGPNTGGKTVSLKTVGLFT 351

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM ++GL +PA +   +  F+ I ADIGD QS+EQ+LSTFS H+  IVDIL  V+ +SL+
Sbjct: 352 LMMQSGLLVPANDGTEMSVFEKIYADIGDEQSIEQSLSTFSSHMKNIVDILSGVNNKSLI 411

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L+DE+G+GTDP+EG ALA SIL+ L       + TTHY++L       T  ENA+ EF +
Sbjct: 412 LLDELGAGTDPTEGAALAMSILECLHQMGATTLATTHYSELKVYAISTTGVENASCEFDV 471

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
           ETLRPTYR+L G  G SNA  I+K +G    II+R+++ +      ++  R  ++  S+ 
Sbjct: 472 ETLRPTYRLLIGVPGKSNAFAISKRLGLTDDIIERSKEFL-----SQEDIRFEDILLSIE 526

Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE----LNFA 611
           + R + E +   A S   E   L +++ED+     RR A  K  E ++ ++E    L  +
Sbjct: 527 KNRSEAEKEKMRAESYRQEAERLKKDLEDQK----RRLAAQKESELRKAREEARRILTDS 582

Query: 612 KVQIDTVVQDFENQLRDASADEINSLIKESESAIA--------AIVEAHRPDDDFSVSET 663
           K Q D +V + +   ++    E+    +E    +         ++VE+  P         
Sbjct: 583 KRQADELVSEMKRLAKEQEEAEVRRQTEELRQKLNKSINNLDDSLVESIMPRQGLVKPPK 642

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           N     P  G+ V + +L  K  TV+ +P  +    VQ G M++ V  +N++ +   K++
Sbjct: 643 N---LKP--GDTVLIVNLNQK-GTVLTLPDKNGEAQVQAGIMKINVHISNLKLVDEQKQQ 696


>gi|78185392|ref|YP_377827.1| MutS 2 protein [Synechococcus sp. CC9902]
 gi|78169686|gb|ABB26783.1| MutS 2 protein [Synechococcus sp. CC9902]
          Length = 814

 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 228/731 (31%), Positives = 374/731 (51%), Gaps = 75/731 (10%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
           MG    +  Q+P  +SL E+ +   +T   A L  +    L    + D+  +L   + G 
Sbjct: 48  MGLESARATQLP--QSLAETLQRQAETVEMAVLDDLTEGGLSFRGVNDLRPVLLRCLKGG 105

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
           + S  E+ AV  TL A   + +++ +         Q   P+   L++    L +LE+++ 
Sbjct: 106 VASGEELLAVAGTLAAARKLRRQIDD---------QELRPVCTALIETMVTLPDLEQRLK 156

Query: 118 FCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITK 173
           F ++ +   + DRAS  L  +R +    R+   + L  L ++ A+  F    +   +I +
Sbjct: 157 FSLE-EGGRVADRASPPLAGLRQQWNGVRQERRDKLQELTRRYAS--F----LQDSVIAQ 209

Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
           R  R  + +KA     +  G   + S+SG T F+EP+  +   N  V +      EE  +
Sbjct: 210 RHGRPVLAVKAGAVGQV-SGQVHDSSASGNTVFIEPRSVLTMGNKLVDIEARIRKEEQRV 268

Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
           L+ L+  +A+ ER +  L++ +L +DLA AR  + +W+  V P L       F     + 
Sbjct: 269 LAELSDLVAQDERVLNSLVEILLALDLALARGRYGRWLGAVPPHLLEDPEAPF----LLR 324

Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
            ++HPLL+    RS      + +P+                      VPI + V  + RV
Sbjct: 325 DLRHPLLIWQHKRS------SGSPV----------------------VPISVDVSAQLRV 356

Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
           V ITGPNTGGKT S+K+LGL +LM++AG+ +P    P LPW   +LADIGD QSL+Q+LS
Sbjct: 357 VAITGPNTGGKTVSLKSLGLVALMARAGMLIPCSGRPSLPWCAQVLADIGDEQSLQQSLS 416

Query: 414 TFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVT 470
           TFSGHI RI  IL+ +      +LVL+DE+G+GTDPSEG ALAT++L+ L DR  L + T
Sbjct: 417 TFSGHIKRIGRILQALESGPVPALVLLDEVGAGTDPSEGTALATALLKALADRARLTIAT 476

Query: 471 THYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQR 530
           TH+ +L  LK  D RFENA+  F+ ETL PTY +LWG  G SNAL IA  +G D  ++ +
Sbjct: 477 THFGELKALKYTDDRFENASVAFNAETLSPTYELLWGIPGRSNALAIATRLGLDAGVLDQ 536

Query: 531 AQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
           AQ L+        +   + + Q L E+R++ ++ A  AA+L A    L+ E+    +   
Sbjct: 537 AQALLA----LAAEGEVNTVIQGLEEQRQRQQAAAEDAAALLARTELLHEELLLRWQKQK 592

Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 650
           ++ A  + +  Q+++Q +   + ++ ++++    +LRD  AD      +++   +  + +
Sbjct: 593 QQTALHQEQGRQRLEQSIREGQKEVRSLIR----RLRDGRAD--GETARKAGQRLRKLED 646

Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
            HRP  +          + P+ GE+V + +LG K A V+ +  D   + V+ G MR  V 
Sbjct: 647 HHRPTKE---KRAPKPGWRPEVGERVRLLALG-KAAEVLAISDDGLQLTVRCGVMRTTVD 702

Query: 711 KNNIRPIPNSK 721
            N +  +   K
Sbjct: 703 LNAVESLDGRK 713


>gi|418993763|ref|ZP_13541400.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG290]
 gi|377746922|gb|EHT70892.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG290]
          Length = 782

 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 206/712 (28%), Positives = 356/712 (50%), Gaps = 105/712 (14%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV---WKKLTEAAELDGDSLQRYS 97
           LS +  ++  ++ A  G +L+ SE+  ++R ++  N     +K+L E      D   +Y 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYKQLVEE-----DEGVKYP 119

Query: 98  PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLL 153
            L + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++
Sbjct: 120 ILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIV 177

Query: 154 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 213
           K  A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   V
Sbjct: 178 KSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVV 232

Query: 214 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMD 272
           E NN   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + 
Sbjct: 233 EMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIK 291

Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
           G  PI         D ++ +    HPLL                       N E  + + 
Sbjct: 292 GTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVIAN- 321

Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
                     I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L
Sbjct: 322 ---------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQL 370

Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
             F  +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG AL
Sbjct: 371 SVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAAL 430

Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
           A SIL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G S
Sbjct: 431 AMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRS 490

Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------A 565
           NA +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        
Sbjct: 491 NAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLV 545

Query: 566 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
           + A  +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   Q
Sbjct: 546 KEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQ 597

Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKS 680
           LR+    +    +KE E     I +  R DD +       +    ++     G++V V S
Sbjct: 598 LREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLS 649

Query: 681 LGDKLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
            G K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 650 YGQK-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|83590547|ref|YP_430556.1| MutS2 family protein [Moorella thermoacetica ATCC 39073]
 gi|83573461|gb|ABC20013.1| DNA mismatch repair protein, MutS family [Moorella thermoacetica
           ATCC 39073]
          Length = 801

 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 211/703 (30%), Positives = 334/703 (47%), Gaps = 78/703 (11%)

Query: 33  MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDS 92
           +++   L L   +DI   +N A +G +L   E+  V  TL A   + + L     L+G+ 
Sbjct: 63  LLRYPDLPLGNFQDIRPEINRAAAGAILEGQELLRVATTLAAGRRLRQFLLG---LEGE- 118

Query: 93  LQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMEN 148
              +  L  L        +LE  I   I    L+ LD+A+  L    + +R  ++R  E 
Sbjct: 119 ---WPVLKGLAAGIGDFRQLERAITAAIGPDGLV-LDQATPRLASLRQQVRQAQERIKER 174

Query: 149 LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFME 208
           LDS L+    Q +    +   L T R  R  + +K  +++ +P G+  + S+SGAT F+E
Sbjct: 175 LDSYLRSTEMQKY----LQDNLFTIRNDRYVLPVKQEYRHQVP-GLVHDQSASGATLFIE 229

Query: 209 PKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
           P   VE NN   RL  +E  E  AIL  L+  +   + EI   +  + E+D   A+   +
Sbjct: 230 PMALVELNNELRRLQTAEAREVEAILLHLSKLVGGQKEEILASLAALGELDFTLAKGRLS 289

Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
           Q M  V P L++           I   +HPLL G                          
Sbjct: 290 QAMAAVPPRLNA------GGRWRIRQGRHPLLGGRV------------------------ 319

Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
                       VP+ + +  +   +VITGPNTGGKT ++KT+GL +LM++ GL+LPA +
Sbjct: 320 ------------VPVSLTLGEDFDTLVITGPNTGGKTVTLKTMGLFTLMAQCGLHLPAAD 367

Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
              +     + ADIGD QS+EQ+LSTFS H+ +IV I+  V   SLVL+DE+G+GTDP+E
Sbjct: 368 GTEVDVTAAVYADIGDEQSIEQSLSTFSAHMRQIVAIVREVEAGSLVLLDELGAGTDPTE 427

Query: 449 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
           G ALA +IL YL       V TTH+++L        R ENAA EF  ETL+PTY++L G+
Sbjct: 428 GAALAMAILDYLTGVGARTVATTHFSELKAYAYATPRVENAAVEFDSETLQPTYKLLIGT 487

Query: 509 TGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTA 568
            G+SNA  +A  +G    +I++A+  +       +  R S L + L  +RR    +   A
Sbjct: 488 PGESNAFAVAGRLGLPPALIEQARGFL-----SEENRRVSRLIEGLTADRRASARERAEA 542

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
            SL  E       +E E ++  ++AA    K  ++ +  L  A+ ++  ++   E  L +
Sbjct: 543 ESLRREAEAAREAMEKERREWQQQAARQLEKAREEARAILRRARYEVRELMARVEKALAE 602

Query: 629 ASADEINSL-------IKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 681
            S      +       +KE E  +   +E ++P       E   +      G++V + S 
Sbjct: 603 ESLRSQQQVLSRARQRLKELEDEVETGMERYQPVAGGQPPEHLRA------GDRVFLASW 656

Query: 682 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
           G ++  V+  P +   VLVQ G ++V V    +R + N   +N
Sbjct: 657 G-QVGEVISPPNEQGEVLVQVGALKVNVPVKELRLVNNDHHEN 698


>gi|398818390|ref|ZP_10576981.1| MutS2 family protein [Brevibacillus sp. BC25]
 gi|398027832|gb|EJL21362.1| MutS2 family protein [Brevibacillus sp. BC25]
          Length = 785

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 227/742 (30%), Positives = 370/742 (49%), Gaps = 91/742 (12%)

Query: 11  IPFGKSLEE---SQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           IPF + L+E   +Q+   Q +  L +  S PL    I DI G +  A    +L+P E+  
Sbjct: 35  IPFLR-LDEVITAQQGTEQAATVLRLKGSVPL--GGIRDIRGPVQRARLNAMLAPMELLD 91

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLI 126
           +  T+ A   +   L +  E          PLL+   +    L ELE +I  CID     
Sbjct: 92  IASTVMAGRRLKTFLLDMCE------DHELPLLQQEAERIEGLRELETEIRRCIDENG-D 144

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 182
           ILD AS +L  +R E    +  L+S +++   Q+ ++    K L    +T R  R  + +
Sbjct: 145 ILDSASLELRQVRQE----IRQLESRIREKLDQMTRSSTYQKMLMENIVTIRGDRFVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           K  ++ +   GI  + S+SGAT F+EP+  VE NN    L   E  E   IL +LT +++
Sbjct: 201 KQEYRSVF-GGIVHDQSASGATLFIEPEVIVEMNNKLRELRLREEREVERILYVLTEQVS 259

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
            +   +    + + E+D  FA+A  A  M  +CP ++ + +V      N+   +HPL+  
Sbjct: 260 FAVEALIENTEALTELDFMFAKAQLAWSMKAICPRINDRGYV------NMRKARHPLI-- 311

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                         P                    +  VP+D+++  E + +V+TGPNTG
Sbjct: 312 --------------P-------------------REVVVPVDVELGGEYQAIVVTGPNTG 338

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT S+KT+GL SLM+ AGL++PA+    +  F  I ADIGD QS+EQ+LSTFS H++ I
Sbjct: 339 GKTVSLKTIGLLSLMTMAGLHIPAEEESEMTVFSSIFADIGDEQSIEQSLSTFSSHMTNI 398

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           + IL  +  +SLVL DE+G+GTDP+EG ALA SI+ ++ D     V TTHY++L      
Sbjct: 399 IQILAKMDDKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSGARLVATTHYSELKAYAYD 458

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ-------KLV 535
                NA+ EF ++TLRPTYR+L G  G SNA  IA+ +G    II  A+         V
Sbjct: 459 RPEVINASVEFDVQTLRPTYRLLIGVPGRSNAFAIARRLGLPEHIIDVARGSISEEDNQV 518

Query: 536 ERLRPERQQHRKSELYQSLMEE--RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
           E +    +++RKS    SL  +  R++ E   R      A+  +   +  + A+D  R A
Sbjct: 519 ESMIASLERNRKSAEADSLAAKAARQEAEELRRQLEEERAQFAEEKNKRMERAEDEARIA 578

Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
             L  +E + + +EL   +  +   ++  E++L DA     N++++  +  +    +A R
Sbjct: 579 VQLAKEEAETIIREL---REMMAEGMEIKEHRLIDAKKRLGNAVLELEKEKVKKPAKAVR 635

Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
                        +   + G++V V S G K  TV+E   +++  LVQ G M+++VK+++
Sbjct: 636 -------------ATQIKVGDEVMVTSFGQK-GTVLEKVNNEE-FLVQIGIMKMKVKRDD 680

Query: 714 IRPIPNSKRKNAANPAPRLRKQ 735
           +    + ++K  A P   ++++
Sbjct: 681 MHVQNSIQQKPQAAPYTSVKRR 702


>gi|255526069|ref|ZP_05392992.1| MutS2 family protein [Clostridium carboxidivorans P7]
 gi|296187117|ref|ZP_06855515.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium carboxidivorans P7]
 gi|255510255|gb|EET86572.1| MutS2 family protein [Clostridium carboxidivorans P7]
 gi|296048311|gb|EFG87747.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium carboxidivorans P7]
          Length = 787

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 213/689 (30%), Positives = 341/689 (49%), Gaps = 74/689 (10%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           + D+   ++ A  G  L P ++  +   LRA     + ++   E +G     +  L  + 
Sbjct: 68  VYDVREGISRAGKGSTLMPGQLLKIAAILRAARRFQEYISHKEEEEG-----FRVLENIS 122

Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR-AERKRN---MENLDSLLKKVAAQ 159
           +    L  +E+ I   I+ +  +  DRAS  L  IR A + +N    + ++SL++  +  
Sbjct: 123 QGIIPLKNIEDHIFMSIESEEQVS-DRASTALYNIRKALKDKNSSVRDRVNSLIRTYSDY 181

Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
           +         L T R  R  + ++A HK  +P G+  + SSSGAT ++EP G V  NN  
Sbjct: 182 L------QDNLYTMRGDRYVLPVRAEHKGAVP-GLVHDQSSSGATLYIEPMGLVNLNNEI 234

Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
             L   E AE   IL+ L+ EI  S   ++   D + E+D  FA+A FA  ++   P   
Sbjct: 235 KELMLKEKAEVDRILAYLSNEIYGSIIAVRNDADIIWELDFIFAKAKFASELNCTAP--- 291

Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
               V+ +  I+I   KHPL+    +                                  
Sbjct: 292 ---KVNDEGIIDIVQGKHPLIDRKVV---------------------------------- 314

Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
            VP+D+ +      +VITGPNTGGKT ++KT+GL  +M+ +GL +PA+ +  + +F  + 
Sbjct: 315 -VPLDVYLGKGFTSLVITGPNTGGKTVTLKTVGLLHIMALSGLMIPARENSTVSFFKEVF 373

Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
           ADIGD QS+EQ+LSTFS H++ IV+I+     ESLVL DE+G+GTDP+EG ALA SIL+ 
Sbjct: 374 ADIGDEQSIEQSLSTFSSHMTNIVNIINKADDESLVLFDELGAGTDPTEGAALAVSILEN 433

Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
           L+ R    V TTHY++L     K    ENA+ EF +ETLRPTYR+L G  G SNA  I++
Sbjct: 434 LKSRGCRIVATTHYSELKVYALKVNGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISR 493

Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH---AEIM 576
            +G    II  A+   E +  E  Q    +L + L E+  K E+ AR A  L    A+I 
Sbjct: 494 RLGLADYIIHDAK---ENINSETLQF--EDLIEDLQEKSVKAEANAREAEMLKLEAAKIK 548

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 636
           D Y E     ++   +A     +E +++ +E   AK + D ++++     +   A ++  
Sbjct: 549 DKYEEKMGSLQNAREKAVINAQREAKRIIKE---AKEEADNILKEMRELEKAGYASDVRH 605

Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGD 694
            ++E    +A  ++  + D+  +  + +          GE+V V SL  K+  V+  P +
Sbjct: 606 KLEEERRKLAQKLD--KIDEKVNKVKRDDGEELKNVREGEEVFVPSLNQKV-IVISKPDN 662

Query: 695 DDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
              V VQ G M++ VK  ++R +  +  K
Sbjct: 663 KGNVQVQAGIMKIEVKLKDLRAVTGAVNK 691


>gi|134299495|ref|YP_001112991.1| MutS2 family protein [Desulfotomaculum reducens MI-1]
 gi|134052195|gb|ABO50166.1| DNA mismatch repair protein, MutS family [Desulfotomaculum reducens
           MI-1]
          Length = 782

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 217/723 (30%), Positives = 352/723 (48%), Gaps = 93/723 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           ++E+ ++   +TS    +++  PL +L+   DI   L  A    +LS  E+ AV  TL A
Sbjct: 38  NMEDIKRWQAETSEGRELLRLDPLAELAGWHDIRQALTRASRYAVLSAEELFAVGETLAA 97

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
              + K  +E  +       RY  L EL ++     +LE+ I   +     I  D + E 
Sbjct: 98  SRQIKKFFSEKTD-------RYPLLSELAESLTNQAQLEKNILQAVLPGGEIADDASPEL 150

Query: 135 LELIRA-ERKRNM--ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
           L++ R  +R +N   E ++++++    Q +    +  P+IT R  R  V +K  ++  +P
Sbjct: 151 LQIRRGIQRSQNRIRERMENIIRSSDNQKY----LQDPIITIRNDRYVVPVKQEYRNQIP 206

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
            GI  + S+SGAT F+EP   VE NN   +L  +E  E   IL  L+ E++    +I   
Sbjct: 207 -GIVHDQSASGATLFVEPMAVVEANNEVRQLVAAEKQEIQRILGQLSQEVSGVHEDISIA 265

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
           ++ + ++D   A+A ++  ++   P IL+          I+I+  +HPLL G +      
Sbjct: 266 LETLGDLDFIMAKARYSLKLNAWSPKILAG-------PMIDIKKGRHPLLPGDA------ 312

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                                         VP  I +    + +VITGPNTGGKT ++KT
Sbjct: 313 ------------------------------VPATISLGKAFKTLVITGPNTGGKTVTLKT 342

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           +GL SLM++AGL++PA+    +  F  + ADIGD QS+EQ+LSTFS H++ +V IL+   
Sbjct: 343 VGLFSLMTQAGLHIPAEAGTEMGVFKQVFADIGDEQSIEQSLSTFSSHMTNLVRILDRAG 402

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLVL+DE+G+GTDP+EG ALA +IL+ L  R    + TTHY++L          ENA+
Sbjct: 403 EGSLVLMDELGAGTDPTEGAALARAILEELHQRGACTLATTHYSELKNYAYATPGVENAS 462

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETLRPTYR+L G  G SNA  I+  +G  R+II+ A+  +       +Q   +EL
Sbjct: 463 VEFDVETLRPTYRLLIGRPGRSNAFEISARLGLRREIIESARGFL-----TTEQVEVAEL 517

Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
              L + ++  E   + AA L  E   L        +DL  +   +  K  ++  + +  
Sbjct: 518 ISRLEKTQQAAEKDRQEAALLRRESEQLKERYHALEQDLRAKKEAILVKAHEEASRMVRQ 577

Query: 611 AKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
           A+++ +  V++  ++L + SA       K  E AI      H   +      +  ++ TP
Sbjct: 578 ARLEAEDTVKELRSRLAEESA-------KNREQAI------HHARNKLQQVTSKVAAKTP 624

Query: 671 QF------------GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
           +             GE+V +     K A VV V G++  V VQ G M++ V    +R + 
Sbjct: 625 KRTADGEIPRQVKPGEEVFLPKYNQK-AYVVGVSGNN--VQVQVGIMKMSVPMQELRTVK 681

Query: 719 NSK 721
             K
Sbjct: 682 EVK 684


>gi|379795514|ref|YP_005325512.1| MutS2 protein [Staphylococcus aureus subsp. aureus MSHR1132]
 gi|356872504|emb|CCE58843.1| MutS2 protein [Staphylococcus aureus subsp. aureus MSHR1132]
          Length = 782

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 204/709 (28%), Positives = 351/709 (49%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ SE+  ++R ++  N       +  E D +   +Y+ L 
Sbjct: 65  LSGLSKVSALIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYNQLVEEDEEV--KYAILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           E +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 EKMNQLPVLTDLFQQINET--CDTYDLYDSASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A  E++   + ++V+  +D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGNVA-VEKDALLVAEQVMGHLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL      +  A  +N+     D+E            
Sbjct: 295 PIFKEERTVYLPKAY------HPLL------NREAVVANTIEFMEDIE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y + ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLTKQYHQYQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  +++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNEEEAI-VQMGIIKMKLPIDDLEKKQKEKVKPTKMVTRQN 699


>gi|293500954|ref|ZP_06666805.1| MutS2 protein [Staphylococcus aureus subsp. aureus 58-424]
 gi|291095959|gb|EFE26220.1| MutS2 protein [Staphylococcus aureus subsp. aureus 58-424]
          Length = 780

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 207/712 (29%), Positives = 357/712 (50%), Gaps = 97/712 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 735
           K   V+E+  D++ + VQ G +++++      PI + ++K    P   + +Q
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKEKVKPTKMVTRQ 696


>gi|291521669|emb|CBK79962.1| MutS2 family protein [Coprococcus catus GD/7]
          Length = 793

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 207/696 (29%), Positives = 338/696 (48%), Gaps = 60/696 (8%)

Query: 26  QTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR-AVNNVWKKLT 83
           +TS AL  +M+   L  S I DI G L     G  +  +E+  +  TL  A+        
Sbjct: 49  ETSDALTRVMKKGSLSFSGIRDIRGSLLRLKVGSTVGMAELLNIAATLDVALRAKSYGRR 108

Query: 84  EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 143
           EA + D DSL+     +E L N N       +I  CI      + D AS  L+ IR + K
Sbjct: 109 EADDEDQDSLEGLFAQIEPLSNLN------HEIRRCI-IDEETMADDASPTLKSIRRQIK 161

Query: 144 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
              E + S L  + +       +   L+T R  R C+ +KA ++  +  G+  + SS+G+
Sbjct: 162 LTNERIHSQLASMVSSQNIGSKLQDNLVTMRNGRYCLPVKAEYRSQV-QGMIHDQSSTGS 220

Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
           T F+EP   V+ NN    L + E  E   IL  L+    KS   ++  +  +  +D  FA
Sbjct: 221 TLFIEPMAVVKLNNDLRELGSKEKEEIEHILDTLSELAGKSAVMLEQDIAVLTRLDFIFA 280

Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
           +A  ++  +G  P+ +   +      I+I+  +HPLL    +                  
Sbjct: 281 KASLSRTYNGSEPVFNENGY------IHIKKGRHPLLDKKKV------------------ 316

Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
                            VPID+ +  + R++++TGPNTGGKT S+KT+GL +LM +AGL+
Sbjct: 317 -----------------VPIDLILGKDYRMLIVTGPNTGGKTVSLKTVGLFTLMGQAGLH 359

Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
           +PA +H  L  FD + ADIGD QS+EQ+LSTFS H++ IV IL     ++LVL DE+ +G
Sbjct: 360 IPAFDHSELAVFDDVFADIGDEQSIEQSLSTFSSHMTNIVRILNAADAKTLVLFDELCAG 419

Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
           TDP+EG ALA +IL+ L +R    + TTHY++L        +  NA  EF + TL PTYR
Sbjct: 420 TDPTEGAALAIAILKTLLNRHVTTMATTHYSELKVFALTTEQVCNACCEFDVATLSPTYR 479

Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES 563
           +L G  G SNA  I+  +G    II+ A+K +     + Q+    EL   L   R  +E 
Sbjct: 480 LLIGIPGKSNAFAISGKLGLPAHIIEEAKKNI-----DVQEQNFEELIADLETSRATIEK 534

Query: 564 QARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE 623
           +    ++  A++  L + +E++  ++ ++   +  +  ++ Q  L  AK   D  ++   
Sbjct: 535 EQEELSAYKAQVESLKKRLEEKHDNITKQKERILNEANEKAQNILQDAKDYADHTIRTM- 593

Query: 624 NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSL 681
           N+L  +   ++ +L +E       + +++        ++         F  G+ VHV+SL
Sbjct: 594 NKLSKSGGVDMKALEQERSRVRDKLNQSNNRKKAAPTAQKAKVYAASDFKQGDSVHVRSL 653

Query: 682 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
            D   TVV  P     + +Q G ++ R+  +++ PI
Sbjct: 654 -DLKGTVVSQPNSKGELSIQMGILKSRIHFSDLEPI 688


>gi|384549903|ref|YP_005739155.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus JKD6159]
 gi|302332752|gb|ADL22945.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 782

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 207/709 (29%), Positives = 356/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD + V     +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEVKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|293376245|ref|ZP_06622488.1| putative recombination and DNA strand exchange inhibitor protein
           [Turicibacter sanguinis PC909]
 gi|325845166|ref|ZP_08168475.1| recombination and DNA strand exchange inhibitor protein
           [Turicibacter sp. HGF1]
 gi|292645137|gb|EFF63204.1| putative recombination and DNA strand exchange inhibitor protein
           [Turicibacter sanguinis PC909]
 gi|325488831|gb|EGC91231.1| recombination and DNA strand exchange inhibitor protein
           [Turicibacter sp. HGF1]
          Length = 781

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 226/731 (30%), Positives = 359/731 (49%), Gaps = 97/731 (13%)

Query: 24  LNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LNQ+  AL ++ +     L  + DI+  +  A    +LS  E+ AV R L AV+ +    
Sbjct: 46  LNQSDEALRIIYALGEAPLGGVSDISEAIARAKISAILSSQELLAVSRLLYAVSQMKSFA 105

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNF-LTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
               E+  D+     P+     N    L+ L+  I  CID +   ++D AS +L  IR  
Sbjct: 106 ERLNEIKVDA-----PIFAHHTNTLVALSSLQNAINACID-ETGYVMDSASGELRSIR-- 157

Query: 142 RKRNMENLDSLLKKVAAQIF--QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
             R +++ +S +K+   Q+   +   +   ++T R  R  V ++A +K     G   + S
Sbjct: 158 --RAIQSTESRIKERLNQVVSERRSKLTDGIVTIRNERYVVPVRADYKNTF-GGTIHDQS 214

Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
           SSG TYFMEPK  V+ NN        E  E   IL  LT E+ K    +   ++ + EID
Sbjct: 215 SSGNTYFMEPKEVVDLNNKLQEWHVEERREIERILRELTEEVKKFVDLLSLNVELLGEID 274

Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
             FA+  +A+ ++G  P ++++        I +   +HPL+                  K
Sbjct: 275 FMFAKGKYARLINGTRPKINTKG------IIRLVAARHPLI----------------DQK 312

Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
           S V N                   DI++  E   +VITGPNTGGKT ++KT+GL +LM++
Sbjct: 313 SVVAN-------------------DIELGDEYTTIVITGPNTGGKTVTLKTVGLLTLMAQ 353

Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
           AGL +PA    +L  FD + ADIGD QS+EQ+LSTFS H++ IV I+E ++  SL+L DE
Sbjct: 354 AGLLIPAHESSQLAIFDHVFADIGDEQSIEQSLSTFSSHMTNIVKIMERLTVNSLILFDE 413

Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
           +G+GTDP EG +LA SIL Y++ R    + T+HY +L     +     NA+ EF++ETL 
Sbjct: 414 LGAGTDPKEGASLAISILNYVKVRGARTIATSHYPELKAYAYEQDDVINASVEFNVETLS 473

Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE------RQQHRKSELYQ- 552
           PTYR+L G  G SNA  I+K +G    I+ +A+  VE  R E      + + R  +L Q 
Sbjct: 474 PTYRLLVGVPGRSNAFEISKRLGLKEAILNQARSYVESERTEMTDLITKLEDRGLQLDQE 533

Query: 553 --------SLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 604
                   +L+EE +K   Q    A   AE   +  +I+ EA +  R+A     +E +Q+
Sbjct: 534 IQHLQQQNTLVEEMKKEYEQK--LAKFEAEREKVLEDIKKEAFESVRQA----KEEAEQI 587

Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
             +L  AK   D  ++D E        +++ SL K++E+  A         + F     N
Sbjct: 588 VMDLRQAKKMADLSMKDHE------LTEKLTSL-KKAEAKQA---------EQFKKKAQN 631

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
                P  G++V V SL ++   ++E   + +  +VQ G M+V +K  +++ +  S +K 
Sbjct: 632 KQPLKP--GDEVMVLSL-NRQGELIEQTKNGEW-MVQLGMMKVNIKPEDLQYLRKSVQKK 687

Query: 725 AANPAPRLRKQ 735
                  + K+
Sbjct: 688 ETKKGQMVHKR 698


>gi|392391882|ref|YP_006428484.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
           dehalogenans ATCC 51507]
 gi|390522960|gb|AFL98690.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
           dehalogenans ATCC 51507]
          Length = 789

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 212/719 (29%), Positives = 343/719 (47%), Gaps = 100/719 (13%)

Query: 24  LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           L +T    ++++  PL  +    +I   L   + G  L+P E+  +R TL+A   + + L
Sbjct: 49  LEETGEGKSILRINPLFSVRGAREIRPYLERCLKGGTLTPDELLHIRDTLKAARIIKQSL 108

Query: 83  ----TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLE 136
               TE   L G           +++       +EE+I  CI  D +   + D+AS  L 
Sbjct: 109 QEGKTEVPHLKG-----------IMEQVILPKGIEEEITRCITEDGQ---VADQASPALA 154

Query: 137 LIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
            +R      + R  E LD +++  A Q      +  P+IT+R  R  V +K  ++   P 
Sbjct: 155 DLRRGVSRLQTRIRETLDGIIRNPAYQKI----LQDPIITQRSERYVVPVKQEYRQSFP- 209

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           GI  + S+SGAT ++EP   V   N    +   E  E   IL LL++ +      I    
Sbjct: 210 GIVHDQSASGATLYIEPMAVVNLGNELREVVLKEQREVQRILLLLSSRVEGEAEAIADAH 269

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
           + +  +D   A+A  ++ M+   P+L+ +  +S   +      +HPLL G          
Sbjct: 270 EALARVDFILAKARLSEEMNAGAPVLTEKQEISLVQA------RHPLLTGKV-------- 315

Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
                                       VP+ I++      VV+TGPNTGGKT ++KT+G
Sbjct: 316 ----------------------------VPLTIQLGTRFDTVVVTGPNTGGKTVALKTIG 347

Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
           L + M++ GL++PA++  R+  F  I ADIGD QS+EQ+LSTFSGH+  IV+I++   R 
Sbjct: 348 LLAAMAQCGLHIPAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIVQKADRR 407

Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
           SL+L+DE+G+GTDP+EG ALA +I+  L +R    V TTHY  L       TR ENA+ E
Sbjct: 408 SLILLDEVGAGTDPTEGSALAMAIIAELHERGARIVATTHYGALKNFAYNTTRVENASVE 467

Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
           F  E+LRPTYR+L G  G SNA  IA  +G    ++ RA+  V     ER+    ++L +
Sbjct: 468 FDSESLRPTYRLLVGIPGKSNAFYIAGRLGLPEGVLDRARTFV----TEREMQ-VADLIE 522

Query: 553 SLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAK 612
           +L + +R+++ + R A        +  + IE E+  L  ++  L+     + Q+ +  AK
Sbjct: 523 NLEDTQREIDLEKRRA-------REERQAIEKESIGLKEKSQKLE----DEYQELMAMAK 571

Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS--VSETNTSSFTP 670
            Q   +V++   +  +   DE+   +KE      AI    +     S  V E +T +   
Sbjct: 572 DQAVEIVREARREA-ERLIDELKLALKEERKDQQAIERTRQGIRKLSNKVGEQDTPARAT 630

Query: 671 Q--------FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           Q         G+ V++  L  K   V+++P     + VQ G +++ V  + IR I   K
Sbjct: 631 QGVDPQEIKLGQMVYMTKLRQK-GQVLKLPNASGEIFVQAGVIKLNVPLSEIRLIQEEK 688


>gi|302144008|emb|CBI23113.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 224/767 (29%), Positives = 388/767 (50%), Gaps = 93/767 (12%)

Query: 15  KSLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIAGILNSAVS-GQLLSP---SEICAV 68
           ++ +ES +LL++T+AAL + +     +D STI+ +  ++ SA+   + + P   +E  AV
Sbjct: 65  QTYQESLRLLDETNAALEIHKHGGCTMDFSTIDAV--LVKSAIQHARRMLPVDGNEAMAV 122

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
              L+    +   L  A + D D  +R+ P+ E++        L + I   +D +   + 
Sbjct: 123 VALLQLAETLQLNLKAAIKEDADWYKRFMPISEVIMGLVINRSLVKLIQQVVD-EDGSVK 181

Query: 129 DRASEDL----ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
           D AS  L    + +R   ++  + +DSL++     + +   ++   ++    R C+   A
Sbjct: 182 DSASSALKQSRDQVRTLERKLYQLMDSLVRN---NVNETSSLE---VSNVDGRWCIKSGA 235

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
           +   L   G+ L+ S SG    +EP  A+  N+   +        E  +L  LT ++   
Sbjct: 236 NLTNL--KGLLLS-SGSGVGSIIEPLSAIPLNDELQKARALAAKAEADVLLKLTEKMQMD 292

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL---------SSQSHVSF--------- 286
             +I+ L+D V+++D+  ARA +     G CP L         S+ +H+S          
Sbjct: 293 LEDIEKLLDSVIQLDVINARATYGLSFGGTCPDLFLAENKNGSSTGAHLSGHGTSEASYP 352

Query: 287 ---DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV-------------ENSEMTVG 330
              + ++++    HPLL+     +L  A  + +   S+              E +++ + 
Sbjct: 353 IKREWTLHLPKAYHPLLVQQHRENLQKARKDVSLAISEQRRKKLQGEKFNVKEETDINLS 412

Query: 331 SLSKGISDF----PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 386
           SL   ++      PVP+D  +   TRV+VITGPNTGGKT  +KT+GLA++M+++GL++ A
Sbjct: 413 SLEMQVTRLEQSPPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHVLA 472

Query: 387 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDP 446
               R+PWFD + ADIGD QSL Q+LSTFSGH+ +I DI    + +SLVL+DE+G+GT+P
Sbjct: 473 AEPVRIPWFDYVFADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGTNP 532

Query: 447 SEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
            EG AL  S+L+   +    L + TTH+++L  LK  +  FENA  EF    L+PTY+IL
Sbjct: 533 LEGAALGMSLLESFAETGALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYKIL 592

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME-ERRKLESQ 564
           WG  G SNA+NIA+ +G  +K++ +A+        E+     +E+ + +++ ER K E Q
Sbjct: 593 WGIPGRSNAINIAERLGVPKKVLDKAR--------EQYGAASAEINEVIIDMERFKQEFQ 644

Query: 565 ARTAASLHAEIM--DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
            R   + +  ++  DLY  +    + L     + +  + ++V +    A+  +   V+  
Sbjct: 645 ERVNDARYYLMLSRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVARSLLHKKVR-- 702

Query: 623 ENQLRDA--------SADEINSLIKESESAIAAIVEAHRPDDDFS-----VSETNTS--S 667
             QLR +        +AD+       S    AA +   RP    S     V++ ++S   
Sbjct: 703 --QLRSSATRPSQPTAADKSQHASATSNQHTAADIN-ERPTTSESKHPAKVAQQSSSEKK 759

Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
             P+ G+ VHV SLG K ATV+EV      ++VQ G M++++K  ++
Sbjct: 760 RVPKVGDMVHVSSLGKK-ATVLEVESSKGQLVVQAGNMKLKLKLTDV 805


>gi|389575981|ref|ZP_10166009.1| MutS2 family protein [Eubacterium cellulosolvens 6]
 gi|389311466|gb|EIM56399.1| MutS2 family protein [Eubacterium cellulosolvens 6]
          Length = 791

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 187/570 (32%), Positives = 288/570 (50%), Gaps = 66/570 (11%)

Query: 56  SGQLLSPS---EICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTEL 112
           +G+LLS +   E CA  +     +N        A+ + DSL    P+ +LL   N LT L
Sbjct: 86  AGELLSIAGLLENCARAKAFGRHDN--------ADTEEDSL---DPIFDLL---NPLTPL 131

Query: 113 EEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
             +I  CI  +  I  D AS  L  IR +  +N + + S L+ +     +   +   +IT
Sbjct: 132 STEIRRCILSEDEIA-DDASSTLRQIRRQISQNGDKIHSQLQSMINGPLR-NALQDAVIT 189

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
            R  R CV +KA ++  +P G+  + SS+GAT F+EP   V+ NN    L   E  E   
Sbjct: 190 MRDGRYCVPVKAENRSAVP-GMIHDQSSTGATLFIEPMAIVKLNNDIRELELKEQKEIEV 248

Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
           IL+ L+A  A+   +I Y +  + E+D  FAR G A  M    P+ +++        IN+
Sbjct: 249 ILATLSASAAEHVEDISYDLQNLAELDFIFARGGLALDMKATEPVFNTEGR------INL 302

Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
              +HPL+    +                                   VPID+ +     
Sbjct: 303 RKARHPLIDKHRV-----------------------------------VPIDVHLGDSFD 327

Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
           ++++TGPNTGGKT S+KT+GL +LM +AGL++P  +   L  F  + ADIGD QS+EQ+L
Sbjct: 328 LLIVTGPNTGGKTVSLKTVGLLTLMGQAGLHIPTLDRSELSVFTEVYADIGDEQSIEQSL 387

Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
           STFS H++ IV  +E   R SLVL DE+G+GTDP+EG ALA +IL +L  +    + TTH
Sbjct: 388 STFSSHMTNIVSFIEKADRNSLVLFDELGAGTDPTEGAALAIAILSHLHRQGIRTMATTH 447

Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
           Y++L        + ENA+ EF++ETL+PTYR+L G  G SNA  I+  +G    II  A+
Sbjct: 448 YSELKIFALSTDKVENASCEFNIETLQPTYRLLIGVPGKSNAFAISSKLGLPDYIIDDAK 507

Query: 533 KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRR 592
             +       Q     ++  SL + R   E++ R       ++  L +E+++  + L+ +
Sbjct: 508 GQI-----SEQDESFEDVLSSLEQNRIAQENEQRAIEYRKQQLEKLEKELKNRERTLETQ 562

Query: 593 AAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
              +  K  +Q +  L  AK   D V++DF
Sbjct: 563 KNKIIEKANEQARTVLQDAKTYADQVMKDF 592


>gi|359490844|ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
          Length = 791

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 222/751 (29%), Positives = 381/751 (50%), Gaps = 88/751 (11%)

Query: 15  KSLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIAGILNSAVS-GQLLSP---SEICAV 68
           ++ +ES +LL++T+AAL + +     +D STI+ +  ++ SA+   + + P   +E  AV
Sbjct: 76  QTYQESLRLLDETNAALEIHKHGGCTMDFSTIDAV--LVKSAIQHARRMLPVDGNEAMAV 133

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
              L+    +   L  A + D D  +R+ P+ E++        L + I   +D +   + 
Sbjct: 134 VALLQLAETLQLNLKAAIKEDADWYKRFMPISEVIMGLVINRSLVKLIQQVVD-EDGSVK 192

Query: 129 DRASEDL----ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
           D AS  L    + +R   ++  + +DSL++     + +   ++   ++    R C+   A
Sbjct: 193 DSASSALKQSRDQVRTLERKLYQLMDSLVRN---NVNETSSLE---VSNVDGRWCIKSGA 246

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
           +   L   G+ L+ S SG    +EP  A+  N+   +        E  +L  LT ++   
Sbjct: 247 NLTNL--KGLLLS-SGSGVGSIIEPLSAIPLNDELQKARALAAKAEADVLLKLTEKMQMD 303

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL---------SSQSHVSF--------- 286
             +I+ L+D V+++D+  ARA +     G CP L         S+ +H+S          
Sbjct: 304 LEDIEKLLDSVIQLDVINARATYGLSFGGTCPDLFLAENKNGSSTGAHLSGHGTSEASYP 363

Query: 287 ---DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF---- 339
              + ++++    HPLL+     +L  A       + DV        SL+  +S      
Sbjct: 364 IKREWTLHLPKAYHPLLVQQHRENLQKA-------RKDV--------SLAISVSYVLEQS 408

Query: 340 -PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
            PVP+D  +   TRV+VITGPNTGGKT  +KT+GLA++M+++GL++ A    R+PWFD +
Sbjct: 409 PPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHVLAAEPVRIPWFDYV 468

Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
            ADIGD QSL Q+LSTFSGH+ +I DI    + +SLVL+DE+G+GT+P EG AL  S+L+
Sbjct: 469 FADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGTNPLEGAALGMSLLE 528

Query: 459 YLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
              +    L + TTH+++L  LK  +  FENA  EF    L+PTY+ILWG  G SNA+NI
Sbjct: 529 SFAETGALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYKILWGIPGRSNAINI 588

Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME-ERRKLESQARTAASLHAEIM 576
           A+ +G  +K++ +A+        E+     +E+ + +++ ER K E Q R   + +  ++
Sbjct: 589 AERLGVPKKVLDKAR--------EQYGAASAEINEVIIDMERFKQEFQERVNDARYYLML 640

Query: 577 --DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL----RDAS 630
             DLY  +    + L     + +  + ++V +    A+  +   V+   +      +  +
Sbjct: 641 SRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVARSLLHKKVRQLRSSATRPSQPTA 700

Query: 631 ADEINSLIKESESAIAAIVEAHRPDDDFS-----VSETNTS--SFTPQFGEQVHVKSLGD 683
           AD+       S    AA +   RP    S     V++ ++S     P+ G+ VHV SLG 
Sbjct: 701 ADKSQHASATSNQHTAADIN-ERPTTSESKHPAKVAQQSSSEKKRVPKVGDMVHVSSLGK 759

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
           K ATV+EV      ++VQ G M++++K  ++
Sbjct: 760 K-ATVLEVESSKGQLVVQAGNMKLKLKLTDV 789


>gi|295107995|emb|CBL21948.1| MutS2 family protein [Ruminococcus obeum A2-162]
          Length = 793

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 207/632 (32%), Positives = 304/632 (48%), Gaps = 80/632 (12%)

Query: 17  LEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL--- 72
           LEE + +  QT  AL  + Q   +   +++DI G L     G  L   EI A+   L   
Sbjct: 40  LEEIRLMQIQTKDALTRLFQKGSVSFGSVKDIRGSLKRLEIGSSLGIQEILAICALLENT 99

Query: 73  ---RAVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
              +A +   +       LDG  D+L   +PL   ++ C  L+E E              
Sbjct: 100 SRVKAYSRKERNDLPVDSLDGMFDALSPLTPLSAEIRRC-ILSEDE-------------F 145

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKRRSRMCVGIKA 184
            D AS  L  IR    RNM+  +  +      +   G    +   +IT R  R C+ +KA
Sbjct: 146 SDDASPALRQIR----RNMKITNDRIHTQLTSLVNGGVRTYLQDSVITMRNGRYCIPVKA 201

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            +K  +P G+  + SS+G+T F+EP   V+ NN    L   E  E   IL+ L+ +IA  
Sbjct: 202 EYKGQVP-GMIHDQSSTGSTLFIEPMSVVKLNNDMRELELQEQKEIEVILADLSQQIALE 260

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
           +  I   +  ++++D  FARA  A  M+   PI + +        IN++  +HPL+    
Sbjct: 261 QETISLNLKIMVQLDFIFARAALAMDMNASEPIFNDEGR------INLKKARHPLI---- 310

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                    N   +                      VPIDI++     ++VITGPNTGGK
Sbjct: 311 ---------NKKKV----------------------VPIDIRLGDTFDLLVITGPNTGGK 339

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T S+KT+GL +LM ++GL++P  +   L  F  + ADIGD QS+EQ+LSTFS H++ IV 
Sbjct: 340 TVSLKTVGLLTLMGQSGLHIPTLDRSELALFHEVYADIGDEQSIEQSLSTFSSHMTNIVS 399

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
            L+   R SLVL DE+ SGTDP+EG ALA SIL YL +R    + TTHY++L       +
Sbjct: 400 FLDKADRHSLVLFDELCSGTDPTEGAALAISILSYLHERGIRTMATTHYSELKVFALSAS 459

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
             ENA  EF +ETL PTYR+L G  G SNA  I+  +G  + II++A+   E+L    Q 
Sbjct: 460 GVENACCEFDVETLSPTYRLLIGIPGKSNAFAISSKLGIPQSIIEKAK---EQLN--EQD 514

Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD---RRAAHLKAKET 601
               ++  SL E R  +E++    A    EI  L +++E + + LD    R      +E 
Sbjct: 515 ESFEDVLTSLEESRVTIENERTEIAQYKQEIETLKKQLESKQEKLDIQKDRIIRQANEEA 574

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
            +V QE      Q   +   F N   D +A E
Sbjct: 575 HKVLQEAKDYADQTMKLFHKFHNDYVDTAAVE 606


>gi|418925376|ref|ZP_13479278.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG2018]
 gi|377744445|gb|EHT68422.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG2018]
          Length = 782

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 356/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSSNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|402303647|ref|ZP_10822737.1| MutS2 family protein [Selenomonas sp. FOBRC9]
 gi|400378042|gb|EJP30906.1| MutS2 family protein [Selenomonas sp. FOBRC9]
          Length = 785

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 216/714 (30%), Positives = 342/714 (47%), Gaps = 81/714 (11%)

Query: 22  KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           +L  +T+ A++++Q Q      I D+   L  A  G  L   E+  +  T++ + NV K 
Sbjct: 45  RLHAETAEAVSVLQMQAPPFGGIYDLRHTLQKATLGSTLEVEELREIMSTMQGMRNV-KY 103

Query: 82  LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
               A+L    L+     +E+L        LE+ +   ID +   + D AS +L  +  E
Sbjct: 104 FFRDADLSLPLLKEKGVRIEILGM------LEKHLQNTID-EHGNLRDDASPELRRVTRE 156

Query: 142 ----RKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
               + R  E L ++L   A Q  FQ     + ++T R  R  + +K  ++   P G+  
Sbjct: 157 MLSAQNRVKERLSTILHDAAYQKCFQ-----EAIVTVRAERYVIPVKQEYRAQFP-GVIH 210

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP   VE NN   ++  +   E   IL  L+ EIA++   +      + 
Sbjct: 211 DRSASGATLFVEPLATVELNNTVRQMELAREQEIRRILQQLSQEIARAADILSENCTILA 270

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           E+DL FARAG ++ M+   P  +   +V    +      +HPLL                
Sbjct: 271 ELDLIFARAGLSRDMEAYAPTFNRAGYVRLQRA------RHPLL---------------- 308

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
           P                    D  VPIDI++     V++ITGPNTGGKT SMKTLG+ +L
Sbjct: 309 P-------------------KDRVVPIDIELGRGFSVLLITGPNTGGKTVSMKTLGILAL 349

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+++G +LP  +   LP +  I ADIGD QS+EQ+LSTFS H   IV IL+      LVL
Sbjct: 350 MAQSGCFLPTASGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIVRILQKAESNDLVL 409

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
           +DE+G+GTDP EG ALA SI+++L  R    + TTHYA L           NA+ EF   
Sbjct: 410 LDEVGAGTDPDEGAALARSIIEHLLQRRISVIATTHYAALKTYAYGRQGVMNASVEFDTA 469

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TLRPTYR+L G+ G SNA +I++ +G    I+ RAQ+ ++      + H + E   + +E
Sbjct: 470 TLRPTYRLLIGTPGASNAFSISRRLGLADAIVARAQRYID------EDHVRFETVVNELE 523

Query: 557 ERRKL----ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAK 612
           + +++    +++ RT A   + + +  R   D+     R+  H   +E   + +E   A+
Sbjct: 524 KEKRVYETRQTELRTRAQKISAMEEQLRTERDKFIRAHRKLLHKAREEANGIVRE---AR 580

Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
              +  ++  + Q  D    E    I+E+      + EA+ P    S  +        + 
Sbjct: 581 RSAEETIKKLKQQFDDHGVKERRKAIQEARE---RLTEAYMPQRHPSAVKVGQKIRAGEI 637

Query: 673 --GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
             G+ VH+  L  +  TV+ V G + T  VQ G +R  VK +    +   K+K+
Sbjct: 638 EPGDIVHITRLAQE-GTVLAVQGKELT--VQIGALRTVVKTDECTFVSRKKKKH 688


>gi|254526388|ref|ZP_05138440.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9202]
 gi|221537812|gb|EEE40265.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9202]
          Length = 803

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 226/743 (30%), Positives = 355/743 (47%), Gaps = 98/743 (13%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
           MG   +    IP     E S++LLN+T     +  +  + +  S + DI+  +     G 
Sbjct: 41  MGKRAILSFGIP--SEYELSKRLLNETVEINELENNLDKSISFSNVFDISRNIEICSKGG 98

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
           ++S +E+  + +T+ A  N+ K L     LD +     S   + L+ + N  T    K G
Sbjct: 99  VISSTELLEIAKTIAAARNLKKIL-----LDFEQRPYISSFTKNLIDHQNVETIF--KKG 151

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
              + K   I D AS +L ++R E          L KK+  +I     I K L       
Sbjct: 152 IESNGK---ISDNASNELSILRKEL---------LSKKLERKILVEKFIQKNLAYLQDTT 199

Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
           I  R  R  + +K ++  +   GI  + SSSG T + EP+  V   N    L    IAEE
Sbjct: 200 IGDRNGRPVLAVKVNY-VIKFKGIIHDSSSSGNTVYFEPESVVTKGNKIASLEARIIAEE 258

Query: 231 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI 290
             +L   +  ++ +   +  +   +L ++ A  R+ +++W+ G  P       +S     
Sbjct: 259 FKLLKKWSQIVSDNSENLIEMSSILLRLENALTRSRYSKWIGGKTPTFEKNPIIS----- 313

Query: 291 NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECE 350
            + G  HPLL+    +  +                              PV +D  +   
Sbjct: 314 -LVGFSHPLLIWEHKKKGAPP----------------------------PVAVDFHINRN 344

Query: 351 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 410
            +VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+   I  DIGD+QSLE+
Sbjct: 345 IKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSLEE 404

Query: 411 NLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
           NLSTFSGHISRI +IL+ ++ +   S+VL+DEIGSGTDP EG ALA ++L+   ++  + 
Sbjct: 405 NLSTFSGHISRIKEILDSLNNKKGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSDIT 464

Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
           + TTHY D+  LK  D+RFEN +  F  ++L+P Y + WG  G SNAL+I+K IG D  I
Sbjct: 465 LATTHYGDIKALKYTDSRFENVSVVFDEDSLKPKYILNWGIPGRSNALSISKRIGLDENI 524

Query: 528 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
           +  A      LRP ++    +++ + L EER K ++ A  AA L A    L+ E++   +
Sbjct: 525 LNEA---ANYLRP-KEVDNINDIIKGLEEERIKQQNSAEAAAELIARTEILHDELKRNYE 580

Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLIKESE 642
                A  ++  E  ++ + +  AK +    V D   +LRD + D      I   +KE E
Sbjct: 581 YQKINAEKIQEIERSKLSKHIVSAKKE----VIDLIKKLRDKNVDGEDTRIIGKRLKEIE 636

Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
           +        H     F  S     S+ PQ G+ V +KSL +    +V++        V+ 
Sbjct: 637 T-------EHLTQKKFKKS----ISWDPQVGDFVKIKSL-NSTGQIVDLDKKGGFYEVKC 684

Query: 703 GKMRVRVKKNNIRPI----PNSK 721
           G  R  +  N+   I    PN K
Sbjct: 685 GSFRSTLSINDFEGINGEKPNFK 707


>gi|390935290|ref|YP_006392795.1| MutS2 protein [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
 gi|389570791|gb|AFK87196.1| MutS2 protein [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
          Length = 786

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 182/553 (32%), Positives = 285/553 (51%), Gaps = 62/553 (11%)

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           P+IT R  R  V +K  ++     G+  + SSSGAT F+EP   VE NN   +L   E  
Sbjct: 184 PIITIRNGRYVVPVKQEYRGTFK-GLVHDQSSSGATLFIEPMAVVELNNDLRQLEIKEQH 242

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ LT E+ +   EI   M  + E+D+ FA+A ++   D   PIL+++ +     
Sbjct: 243 EIERILAELTDEVGEHADEIYENMVALKELDVIFAKAKYSINTDSTKPILNTKGY----- 297

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
            INI+  +HPL+                                     D  VPI + + 
Sbjct: 298 -INIKNARHPLIA-----------------------------------KDAVVPISVHLG 321

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
                +VITGPNTGGKT ++KT+GL +LMS +GL +PA +   + +FD +  DIGD QS+
Sbjct: 322 QSFNTLVITGPNTGGKTVTLKTVGLLTLMSMSGLNIPADDGSDVAFFDNVFVDIGDEQSI 381

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQ+LSTFS H++ IV IL  V+  SLVL+DE+G+GTDP+EG ALA SIL +L       +
Sbjct: 382 EQSLSTFSAHMTNIVKILNNVNSNSLVLLDELGAGTDPTEGAALAMSILDFLHRMNCRTI 441

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L     K+   ENA+ EF +ETL+PTYR+  G  G SNA  I+K +G +  II
Sbjct: 442 ATTHYSELKQYALKNEGVENASVEFDVETLKPTYRLTIGIPGKSNAFEISKRLGLNDDII 501

Query: 529 QRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
           + A+  +  E LR E       ++ + L  +R + E+  +    L   +  L  E E + 
Sbjct: 502 ENAKNYITSEELRFE-------DILRDLENKRTEAENAKQKIEELKRHVESLKDEYEKKV 554

Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAI 645
           K+ +R    +  K  ++ ++ L   K   D ++     +L++A  +D  N LI+E+   +
Sbjct: 555 KEAEREREKIIEKAREKAKKILEGTKSTADEIIA----KLKEAEKSDRKNKLIEEARLKL 610

Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
              +  +  +++   SE       P+    G+  ++  L D+  T +  P  D  V +Q 
Sbjct: 611 KENI--NEIEENLKRSEIPEYKKIPKNVMPGQTFYIVPL-DQTGTALSEPDKDGNVKIQA 667

Query: 703 GKMRVRVKKNNIR 715
           G +++ V  +N+R
Sbjct: 668 GILKMNVHISNLR 680


>gi|317132907|ref|YP_004092221.1| MutS2 family protein [Ethanoligenens harbinense YUAN-3]
 gi|315470886|gb|ADU27490.1| MutS2 family protein [Ethanoligenens harbinense YUAN-3]
          Length = 796

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 227/738 (30%), Positives = 358/738 (48%), Gaps = 89/738 (12%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQL 59
           G A   +A  P G SLE++++ L QT+ A  L+     P     ++D++  L  A  G  
Sbjct: 28  GGARHARALTPSG-SLEDAREQLAQTADAVRLSTRFGDP-PFGGVQDVSDALQRAKIGAS 85

Query: 60  LSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
           L   ++  V R L  +  +  W+   + AE +   L  +    + L    +L   EEKI 
Sbjct: 86  LQMGDLLRVARVLSVIRALVRWR---DGAEQETTCLDDF---FDALAPNKYL---EEKIT 136

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
             I      + D AS +L  IR   +R  + +   L K+      A  + + ++T+R  R
Sbjct: 137 AAI-LPEEEMADTASAELADIRRNIRRAGQRVREQLDKMVHSQRYAKFLQEAIVTQRGGR 195

Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
             + ++A ++  +P G+  + S+SGAT F+EP   VE +N    L   E  E   IL+ L
Sbjct: 196 FVIPVRAEYRSEVP-GLVHDTSASGATLFIEPMAVVEADNELKVLYVKEEKEIERILAAL 254

Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
           +AE++     I   +    ++D  FARA  +  M    P      H++ D  I++   +H
Sbjct: 255 SAEVSTFADVIAQDVRTAEKLDFVFARARLSFAMKAGVP------HLADDGIIDLHRARH 308

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
           PLL                P                    D  VPIDI++      +VIT
Sbjct: 309 PLL----------------P-------------------PDQAVPIDIRLGEPFDTLVIT 333

Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
           GPNTGGKT ++KTLGL +LM+ +GL +P  +  +L +F+ +LADIGD QS+EQ+LSTFS 
Sbjct: 334 GPNTGGKTVALKTLGLITLMAMSGLAVPVADDSKLSFFEQVLADIGDEQSIEQSLSTFSA 393

Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
           H++ I+ IL      SLVL+DE+GSGTDP+EG ALA +IL++LR R      TTHYA+L 
Sbjct: 394 HMTNIIGILHTCGTRSLVLLDELGSGTDPTEGAALAVAILEHLRLRGAKVAATTHYAELK 453

Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
               +    EN + EF + TLRPTYR+L G  G SNA  I+  +G    II RA+ L+  
Sbjct: 454 LYALETPGVENGSCEFDVATLRPTYRLLIGVPGRSNAFAISARLGLYESIIVRAKALL-- 511

Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
                +  R  ++ + L + R  LE     AA   AE +    E + EA      AAHL+
Sbjct: 512 ---SNEDTRFEQVVEGLEKNRLALE-----AARTEAEALRRQAEQDREA------AAHLR 557

Query: 598 AKETQQVQQELNFAKVQIDTVV-----------QDFENQLRDASADEINSLIKESESAIA 646
            +     ++EL  A+VQ   +V            D +   +  +A++  +L + ++S + 
Sbjct: 558 DQMENAREKELERARVQAQAMVGRARAEAQALLTDIDELRKMEAAEKAEALRELAKSTVG 617

Query: 647 AIVEAHRPDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
           A ++A     D    +       P   + G++V +  + D+  TV+        V VQ G
Sbjct: 618 ARLDALEKTADPVRKKQAQPYRLPRRLRSGDRVLIHDI-DQKGTVLSTADASGMVEVQAG 676

Query: 704 KMRVRVKKNNIRPIPNSK 721
            ++ RV ++++R + N +
Sbjct: 677 IIKTRVPESDLRLLENER 694


>gi|431792234|ref|YP_007219139.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
           dichloroeliminans LMG P-21439]
 gi|430782460|gb|AGA67743.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
           dichloroeliminans LMG P-21439]
          Length = 789

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 215/723 (29%), Positives = 347/723 (47%), Gaps = 97/723 (13%)

Query: 12  PFGKSLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
           PF   L+  ++ L +T  A ++++  PL  +   ++I  +L   + G  L+P E+  +R 
Sbjct: 38  PFA-HLDLVREALEETGEAKSILRVNPLFSVRGAKEIRPLLERCLRGGTLTPDELLQIRD 96

Query: 71  TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE-LEEKIGFCI--DCKLLII 127
           TL+A   V + L E         +  +P L+ +     L + +EE+I  CI  D +   +
Sbjct: 97  TLKAARYVKQSLLEG--------KVETPHLKGIMESVLLPKGIEEEISRCITEDGQ---V 145

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK----PLITKRRSRMCVGIK 183
            D+AS  L     E +R +  L S +++    I +     K    P+IT+R  R  V +K
Sbjct: 146 ADQASPLL----TELRRGIGRLQSRIRETLEGIIRNPSYQKILQDPIITQRSERYVVPVK 201

Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
             ++     GI  + S+SGAT F+EP   V   N    +   E  E   IL LL+A +  
Sbjct: 202 QEYRQAF-QGIVHDQSASGATLFIEPMTVVNLGNELREVILKEQREVQRILLLLSARVEG 260

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
               I    + +  +D   A+A  ++ M+   PIL+ +  +S   +      +HPLL G 
Sbjct: 261 EVEAIAETHEALARVDFILAKAHLSEGMNAGAPILTDKQEISLVQA------RHPLLTGK 314

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                                                VP+ I++      VV+TGPNTGG
Sbjct: 315 V------------------------------------VPLTIELGTRFDTVVVTGPNTGG 338

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT ++KTLGL + M++ GL++PA++  R+  F  I ADIGD QS+EQ+LSTFSGH+  IV
Sbjct: 339 KTVALKTLGLLAAMAQCGLHIPAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMRNIV 398

Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
           +I+E     SL+L+DE+G+GTDP+EG ALA +I+  L +R    V TTHY  L       
Sbjct: 399 EIVEKADERSLILLDEVGAGTDPTEGSALAMAIIAQLHERGSRIVATTHYGALKNFAYNT 458

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
            R ENA+ EF  ETLRPTYR+L G  G SNA  IA  +G   +++ RA+  V     ER+
Sbjct: 459 PRVENASVEFDSETLRPTYRLLIGIPGKSNAFYIAGRLGLPEEVLVRARTYV----TERE 514

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
               ++L ++L + +R+++ + R A      I      ++++++ L+     L AK   Q
Sbjct: 515 MQ-VADLIENLEDTQREIDFEKRRAREERQIIEIESLGLKEKSQKLEDEYQGLMAKAKDQ 573

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
             + +  A+ + + ++            DE+   +KE      A+  A +     S S  
Sbjct: 574 ATEIVREARREAERLI------------DELKLALKEDRKDQQAVDRARQGIRKLS-SRV 620

Query: 664 NTSSFTP-----------QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
            TS   P           + G+ V++  L  K   V+++P     +LVQ G +++ V  +
Sbjct: 621 GTSDSQPRASEGVNPEDLKLGQMVYMTKLRQK-GQVLKLPNSSGEILVQAGVIKLNVPLS 679

Query: 713 NIR 715
            IR
Sbjct: 680 EIR 682


>gi|417796292|ref|ZP_12443507.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21305]
 gi|443640481|ref|ZP_21124470.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21196]
 gi|334269791|gb|EGL88204.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21305]
 gi|443405162|gb|ELS63772.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21196]
          Length = 782

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 356/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|399046291|ref|ZP_10738749.1| MutS2 family protein [Brevibacillus sp. CF112]
 gi|433543508|ref|ZP_20499913.1| DNA mismatch repair protein [Brevibacillus agri BAB-2500]
 gi|398055652|gb|EJL47713.1| MutS2 family protein [Brevibacillus sp. CF112]
 gi|432185182|gb|ELK42678.1| DNA mismatch repair protein [Brevibacillus agri BAB-2500]
          Length = 785

 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 229/766 (29%), Positives = 368/766 (48%), Gaps = 108/766 (14%)

Query: 5   VVQKAQIPFGKS----------LEE---SQKLLNQTSAALAMMQSQPLDLSTIEDIAGIL 51
           +V KA   +GK           L+E   +Q+   + +  L +  S PL    I DI G +
Sbjct: 18  LVDKASCTYGKEKAAELTPFVRLDEVKIAQQGTEEAATVLRLKGSAPL--GGIRDIRGSV 75

Query: 52  NSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLT 110
             A    +L+P E+  +  T+ A   +   L +  E          PL+ +  +    L 
Sbjct: 76  QRARLNAMLAPMELLDIASTVMAGRRLKTFLLDMCE------DHEMPLIKQQAERIEGLR 129

Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGI 166
           ELE +I  CID     ++D AS +L  +R E +    R  E LD + +  + Q      +
Sbjct: 130 ELEMEIRRCIDENG-DVMDSASMELRQVRQEIRQVESRIREKLDQMTRSSSYQKM----L 184

Query: 167 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 226
            + ++T R  R  + +K  ++++   GI  + S+SGAT F+EP+  V  NN    L   E
Sbjct: 185 MENIVTIRGDRFVIPVKQEYRHVF-GGIVHDQSASGATLFIEPEVIVSMNNKLRELRLRE 243

Query: 227 IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
             E   IL LLT ++A +   +   +D + E+D  FA+A  A  M  VCP L+ + +   
Sbjct: 244 EREVERILYLLTEQVAFAVDALVENVDALTELDFMFAKAQLAWSMKAVCPKLNDRGY--- 300

Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
              +N++  +HPL+                P                    +  VP+D++
Sbjct: 301 ---LNMKKARHPLI----------------P-------------------REVVVPVDVE 322

Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
           +  E + +V+TGPNTGGKT S+KT+GL SLM+ AGL++PA+    +  F  + ADIGD Q
Sbjct: 323 LGGEYQAIVVTGPNTGGKTVSLKTIGLLSLMAMAGLHIPAEEESEMTVFSSVFADIGDEQ 382

Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
           S+EQ+LSTFS H+  I+ ILE +  +SLVL DE+G+GTDP+EG ALA SI+ ++ D    
Sbjct: 383 SIEQSLSTFSSHMKNIISILEKMDAKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSGAR 442

Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
            V TTHY++L           NA+ EF ++TLRPTYR+L G  G SNA  IA+ +G    
Sbjct: 443 LVATTHYSELKAYAYDRPEVINASVEFDVQTLRPTYRLLVGVPGRSNAFAIARRLGLPEA 502

Query: 527 IIQRAQ-------KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM--- 576
           II+ A+         VE +    +++RKS     L     + E++               
Sbjct: 503 IIEVARGSISEEDNQVESMIASLERNRKSAEADRLAAAAARKEAEELRRQLEEERARFAE 562

Query: 577 ---DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
               L    EDEA    R A  L  +E + + +EL   +   D  V+  E++L DA    
Sbjct: 563 EKNKLMERAEDEA----RIAVQLAKEEAETIIRELREMR---DEGVEIKEHRLIDAKKRL 615

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 693
            N++++  +  +    +A R             +   + G++V V S G K  TV+E   
Sbjct: 616 GNAVLELEKEKVKKPAKAVR-------------ATQIKVGDEVMVTSFGQK-GTVLE-KV 660

Query: 694 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTC 739
           ++D  LVQ G M+++V++ ++    +  +K  A P   ++++  + 
Sbjct: 661 NNDEFLVQIGIMKMKVRREDMNVQNSITQKPQAAPYTSVKRRTASI 706


>gi|167772055|ref|ZP_02444108.1| hypothetical protein ANACOL_03429 [Anaerotruncus colihominis DSM
           17241]
 gi|167665853|gb|EDS09983.1| MutS2 family protein [Anaerotruncus colihominis DSM 17241]
          Length = 793

 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 220/697 (31%), Positives = 339/697 (48%), Gaps = 83/697 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSP 98
           +  + + +  L  A  G  LSP E+  V R LRA+  +  W+     ++L+GD       
Sbjct: 64  IGGVTNCSAALKRAAVGARLSPRELLDVARVLRAIETIERWR-----SQLEGDPTS---- 114

Query: 99  LLELLKNCNF-LTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSLL 153
            LE L +C   L  L+  I   I  +  I  D AS  L      IR+   +  E LD L+
Sbjct: 115 -LEFLLDCVVALPSLQRAISTAIVTEDEIA-DAASPALGDIRRKIRSAGAKAREVLDRLV 172

Query: 154 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 213
           +    Q +    + + +IT+R  R  V ++  ++  +  G+  + S SGAT F+EP G V
Sbjct: 173 RSATYQKY----LQENIITQRDGRFVVPVRQEYRNEI-KGLVHDTSGSGATVFIEPMGVV 227

Query: 214 EFNNMEVR-LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
           E NN E+R L   E AE   IL  L+A++      I    + ++E+DL FA++  A  M 
Sbjct: 228 EANN-EIRILQGQEQAEIDRILRELSAQVGACADSIGGSYEAIVELDLYFAKSRLADEMR 286

Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
              P +S         +      +HPLL                P               
Sbjct: 287 ATEPAISETGAAELKRA------RHPLL----------------P--------------- 309

Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
               +D  VPID+++  +   +V+TGPNTGGKT ++KTLGL S M++ GL LPA +   +
Sbjct: 310 ----ADRVVPIDLRLGGDFDTLVVTGPNTGGKTVAIKTLGLLSAMAQCGLMLPAADGSTV 365

Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
           P F+ +L DIGD QS+EQ+LSTFS H++ I+ IL+     SLVL+DE+G+GTDP EG AL
Sbjct: 366 PVFEKLLVDIGDEQSIEQSLSTFSAHMTNIIRILDEADGRSLVLLDELGAGTDPVEGAAL 425

Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
           A +I++ LR +    V TTHYA++          ENA+ EF + TLRPTYR+L G  G S
Sbjct: 426 AVAIIERLRAQGAKVVATTHYAEIKMYALNTPGVENASCEFDVATLRPTYRLLIGVPGRS 485

Query: 513 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
           NA  I + +G    +I+ A+  V  E LR E    +  +  Q L   R + ESQ R  A 
Sbjct: 486 NAFAICERLGLPAGVIEAARAHVSGENLRFEEVVSQLEQTRQELERARVQAESQ-RAGAQ 544

Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
              +  D  R   ++ ++ +   A ++A+    V+Q    A +Q   ++ + +   R   
Sbjct: 545 RERDEADALRRAMEQEREREIERARVQARGI--VEQ----AGMQAQKLLDELDELRRQKD 598

Query: 631 ADEINSLIKESESAIAA-IVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
           +        +++SA  A +   H   D   V+  N   +TP+     G+ V + SLG + 
Sbjct: 599 SAGFAERAAQAKSAFKANMRRLHDLAD--PVTRKNIEQYTPERPLKRGDTVRLVSLG-RE 655

Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            TV+  P     V VQ G ++ +V ++ +R +    R
Sbjct: 656 GTVLSAPDGQGFVQVQAGIIKTKVHQSELRLVDTKDR 692


>gi|456014379|gb|EMF47994.1| Recombination inhibitory protein MutS2 [Planococcus halocryophilus
           Or1]
          Length = 786

 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 211/675 (31%), Positives = 336/675 (49%), Gaps = 72/675 (10%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  LSP E+  V  T+RA + + ++  E  + + D +Q     LE  ++   LT LE  I
Sbjct: 82  GGSLSPMELMEVSSTVRA-SRILRQFFETIQ-EEDVVQ-IPHFLEKKESMPILTVLEHAI 138

Query: 117 GFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLI 171
             CID    + LD AS +L  IR     +  R  E L+SL++ K A+++     +   ++
Sbjct: 139 NVCIDDNGGV-LDSASTELRSIRQQLRTQESRVRERLESLVRGKNASKM-----LSDSIV 192

Query: 172 TKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEET 231
           T R  R  + +K  ++     GI  + SSSG T F+EP   V+ NN   RL   E  E  
Sbjct: 193 TIRNDRFVIPVKQEYRSHY-GGIVHDQSSSGQTLFIEPDSVVQANNEVRRLKMKEKEEID 251

Query: 232 AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
            IL +L+A++ +   E+  L+D + EIDL  A+A +     G  P ++++ +      IN
Sbjct: 252 RILLMLSAQVQEVAHELFVLVDVLGEIDLILAKAKYGSAHKGTKPTMNTEGY------IN 305

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
           ++  +HP++                P                    D  VP DI+   E 
Sbjct: 306 LKKARHPMI----------------P-------------------RDEVVPNDIEFGREI 330

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
             +VITGPNTGGKT ++KT+GLA+LM+++GL +PA +   L  FD I ADIGD QS+EQ+
Sbjct: 331 TAIVITGPNTGGKTVTLKTVGLATLMAQSGLPVPALDGSELAVFDQIFADIGDEQSIEQS 390

Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           LSTFS H+  IVDIL      SLV+ DE+G+GTDP EG ALA S+L  +  R    + TT
Sbjct: 391 LSTFSSHMVNIVDILTKFDENSLVIFDELGAGTDPQEGAALAISLLDEVHGRGARVIATT 450

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY +L           NA+ EF +ETL PTYR+L G  G SNA  I+K +G    II  A
Sbjct: 451 HYPELKAYGFNRPGVANASVEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLPEHIISHA 510

Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
           +                 +  SL + RR+ E  A     + +E   L +E+  + ++ ++
Sbjct: 511 KSFT-----GTDSKAVDSMIASLEKSRREAERDAERTQEVLSESEQLKKELAQQLEEYEK 565

Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAI-V 649
           +    + K  ++ ++ ++ A+ + ++V+ +    QL   S+      +KE E   A   +
Sbjct: 566 QKEQREEKAKEKARKIVDEARAEAESVISELRKMQLNQGSS------VKEHELIYAKKRL 619

Query: 650 EAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
           E   P +         ++  P Q  ++V V S G K  T+VE    ++ + VQ G ++++
Sbjct: 620 EDAMPQNRILKKAAKDNAAKPLQPNDEVKVISFGQK-GTLVEKVSKNEWI-VQIGILKMK 677

Query: 709 VKKNNIRPIPNSKRK 723
           + ++++      K+K
Sbjct: 678 LPESDLSFTKPEKQK 692


>gi|222529627|ref|YP_002573509.1| MutS2 family protein [Caldicellulosiruptor bescii DSM 6725]
 gi|254766186|sp|B9MK78.1|MUTS2_ANATD RecName: Full=MutS2 protein
 gi|222456474|gb|ACM60736.1| MutS2 family protein [Caldicellulosiruptor bescii DSM 6725]
          Length = 787

 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 211/693 (30%), Positives = 348/693 (50%), Gaps = 94/693 (13%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
            E+I   L  +  G  L+P EI  + + L+    +   L+          Q +S L  + 
Sbjct: 68  FENILPSLKKSKLGATLNPHEILQIGKVLKLSYEMRTYLS--------FTQDFSFLESMK 119

Query: 104 KNCNFLTELEEKIGFCIDCKLLI---ILDRASEDLELIRAERKRNMEN-----LDSLLKK 155
           K    L  L+E I   ID   L    ILD AS  L+ IR ++ R +EN     L+S+++ 
Sbjct: 120 KR---LVNLKEVIS-RIDQTFLTPDEILDTASSKLKEIR-DKIRKLENKIRDELNSMIRD 174

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
              Q F    + +P+IT R  ++ + +KA  +  +  GI  + S++GAT F+EP   VE 
Sbjct: 175 PKIQRF----LQEPIITIRGEKLLLPVKAEFRNEVK-GIVHDQSATGATLFVEPFVCVEI 229

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           +N    L N E  E   IL  +++ IA     I+     ++E+D+ F +A +A+ M+   
Sbjct: 230 SNQIKILKNQEKEEIERILQEISSLIASYCEVIETSFYALVELDIVFTKAIWAKEMNASK 289

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI+++         IN++  +HPL+                                   
Sbjct: 290 PIINASG------IINLKKARHPLIQ---------------------------------- 309

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             D  VPIDI +  +  V++ITGPNTGGKT ++KT+GL  L+ ++G+++PA     L  F
Sbjct: 310 -KDKVVPIDIHLGKDFDVLIITGPNTGGKTVTLKTVGLFCLLCQSGIFIPADEGSELCIF 368

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+ Q+LSTFS H+  I++I +    ++LVL+DEIG+GTDP EG ALA +
Sbjct: 369 QKIFADIGDDQSIVQSLSTFSAHMKNIIEITKNADDKTLVLLDEIGAGTDPEEGAALAKA 428

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL+YL ++    + TTHY +L     ++ RFENA+ EF ++TL+PTYR+L G  G SNAL
Sbjct: 429 ILKYLSEKGSKVIATTHYGELKIFAQQEDRFENASCEFDVKTLKPTYRLLIGIPGRSNAL 488

Query: 516 NIAKSIGFDRKIIQRA-----QKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTA 568
            I+ ++G D+ I++ A     QK +  +R+  E +Q RK       + ++ K E+QA  A
Sbjct: 489 VISSNLGLDKGIVEMARGYLSQKTIDLDRIINEMEQKRKEAEENLELAQKLKHEAQALKA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF----EN 624
           A             E+E K  +     ++ K   + ++ +  ++ +I+ + +D     EN
Sbjct: 549 A------------YEEEKKRFETERERIRKKAINEAKEIVESSQYEIENLFKDLRKLAEN 596

Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
                   E+    +E E  I +I +  + + +   S+T  +    + G++V+V+S  D 
Sbjct: 597 LKEKEVLKELEEKKREYERLIQSISQQVKQEAE---SKTKKTIQNLRLGQKVYVRSF-DA 652

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
              V  +P     + VQ G M++ V  ++I  +
Sbjct: 653 EGFVESLPDSKGNLTVQIGIMKINVNLSDIEEV 685


>gi|255281368|ref|ZP_05345923.1| DNA mismatch repair protein MutS [Bryantella formatexigens DSM
           14469]
 gi|255268325|gb|EET61530.1| MutS2 family protein [Marvinbryantia formatexigens DSM 14469]
          Length = 792

 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 224/727 (30%), Positives = 355/727 (48%), Gaps = 102/727 (14%)

Query: 17  LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           +EE + L  +TS AL+M+ Q   +  S + +I G L     G +LSP+E+ A+ R L   
Sbjct: 40  IEEIRMLQAETSLALSMLYQKGHVSFSGVTNIRGSLKRLEVGSILSPAELLAICRLLEVT 99

Query: 76  NNV----WKKLTE----AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           N V     K+ +E    A ++  ++LQ  +PL   ++ C  L   EE            I
Sbjct: 100 NRVKAYSRKENSEEEPNALDVMFEALQPLTPLANEIRRC--LPSEEE------------I 145

Query: 128 LDRASEDLELIR-AERKRN---MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
            D AS  L  IR A R+ N      L+S++   A    Q       ++T R  R C+ +K
Sbjct: 146 SDDASPALRSIRRAMRQMNDKVHAQLNSMVNGSAKAYLQ-----DAVVTMRNGRYCLPVK 200

Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
           A ++  +  G+  + SS+G+T F+EP   ++ NN    L   E  E   IL+ L+ +   
Sbjct: 201 AEYRGQV-QGMIHDQSSTGSTLFIEPMAVIKLNNELRELEIKEEKEIEVILANLSGQAGV 259

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
            +  ++  +  + ++D  FARA  ++  DG  P+L++         INI+  +HPLL   
Sbjct: 260 EQEALESNLTLLTKLDFIFARAQLSKSYDGSEPVLNNHG------VINIKKGRHPLL--- 310

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                                 + TV           VPIDI++  +  +++ITGPNTGG
Sbjct: 311 ---------------------DKKTV-----------VPIDIRLGQDFDLLIITGPNTGG 338

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT S+KT+GL +LM ++GL++PA +   L  FD + ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 KTVSLKTVGLFTLMGQSGLHIPAFDGSELAVFDDVFADIGDEQSIEQSLSTFSAHMTNIV 398

Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
            IL+  +  SLVL DE+G+GTDP+EG ALA ++L  L  +    + TTHY++L       
Sbjct: 399 SILKEANERSLVLFDELGAGTDPTEGAALAIAVLSNLHRQGIRTMATTHYSELKVFALST 458

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
              EN   EF++ETLRPTYR+L G  G SNA  I+  +G    II+ A++         Q
Sbjct: 459 PGVENGCCEFNVETLRPTYRLLIGIPGKSNAFAISAKLGLPEDIIEEARE---------Q 509

Query: 544 QHRKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
             ++ E ++SL+ +    R  +E +         EI  L + +E + + LD     +  +
Sbjct: 510 LSQQDEDFESLISDLETSRVTIEREREEINHYKEEIERLKQRLEQKQETLDASRERILRE 569

Query: 600 ETQQVQQELNFAKVQIDTVVQDFE---NQLRDASA-DEINSLIKESESAIA---AIVEAH 652
             +Q    L  AK   DT +++F     Q  D+ A ++  S ++E  S++    AI    
Sbjct: 570 ANEQAHAILREAKEYADTTIKNFNKFGKQGIDSRAMEQERSRLREKMSSVEKNLAIKTQR 629

Query: 653 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
            P       + +        G+ V V S+  K  TV  +P     + VQ G +R +V   
Sbjct: 630 APAKTLQAKDLH-------LGDSVRVLSMNLK-GTVSTLPNAKGDLFVQMGILRSQVNIK 681

Query: 713 NIRPIPN 719
           ++  I +
Sbjct: 682 DLEKIAD 688


>gi|57651753|ref|YP_186017.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus COL]
 gi|87161406|ref|YP_493741.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|88194845|ref|YP_499643.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|151221268|ref|YP_001332090.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|161509318|ref|YP_001574977.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|221140458|ref|ZP_03564951.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus str. JKD6009]
 gi|258451841|ref|ZP_05699862.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A5948]
 gi|262048725|ref|ZP_06021607.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus D30]
 gi|282919921|ref|ZP_06327650.1| MutS2 protein [Staphylococcus aureus A9765]
 gi|284024069|ref|ZP_06378467.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 132]
 gi|294848134|ref|ZP_06788881.1| MutS2 protein [Staphylococcus aureus A9754]
 gi|304381299|ref|ZP_07363952.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|379014337|ref|YP_005290573.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus VC40]
 gi|384861738|ref|YP_005744458.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|384869677|ref|YP_005752391.1| MutS2 protein [Staphylococcus aureus subsp. aureus T0131]
 gi|385781372|ref|YP_005757543.1| mutS2 protein [Staphylococcus aureus subsp. aureus 11819-97]
 gi|387142755|ref|YP_005731148.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           subsp. aureus TW20]
 gi|415688463|ref|ZP_11452153.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus CGS01]
 gi|417648497|ref|ZP_12298321.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21189]
 gi|418282999|ref|ZP_12895756.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21202]
 gi|418286447|ref|ZP_12899093.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21209]
 gi|418318056|ref|ZP_12929471.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21232]
 gi|418321588|ref|ZP_12932927.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus VCU006]
 gi|418570974|ref|ZP_13135228.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21283]
 gi|418574595|ref|ZP_13138762.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21333]
 gi|418578974|ref|ZP_13143069.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1114]
 gi|418647620|ref|ZP_13209683.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-88]
 gi|418657820|ref|ZP_13219574.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-111]
 gi|418875077|ref|ZP_13429339.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC93]
 gi|418903353|ref|ZP_13457394.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1770]
 gi|418911750|ref|ZP_13465733.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG547]
 gi|419775285|ref|ZP_14301227.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus CO-23]
 gi|422743467|ref|ZP_16797451.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus MRSA177]
 gi|422745626|ref|ZP_16799565.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|424784971|ref|ZP_18211774.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus CN79]
 gi|440708153|ref|ZP_20888828.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21282]
 gi|440734591|ref|ZP_20914203.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus DSM 20231]
 gi|448744704|ref|ZP_21726588.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus KT/Y21]
 gi|81694717|sp|Q5HGU0.1|MUTS2_STAAC RecName: Full=MutS2 protein
 gi|122539777|sp|Q2FZD3.1|MUTS2_STAA8 RecName: Full=MutS2 protein
 gi|123486337|sp|Q2FHT7.1|MUTS2_STAA3 RecName: Full=MutS2 protein
 gi|229486380|sp|A6QG46.1|MUTS2_STAAE RecName: Full=MutS2 protein
 gi|229486381|sp|A8Z1S5.1|MUTS2_STAAT RecName: Full=MutS2 protein
 gi|57285939|gb|AAW38033.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
           subsp. aureus COL]
 gi|87127380|gb|ABD21894.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87202403|gb|ABD30213.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|150374068|dbj|BAF67328.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|160368127|gb|ABX29098.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|257860449|gb|EEV83276.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A5948]
 gi|259163181|gb|EEW47741.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus D30]
 gi|269940638|emb|CBI49017.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           subsp. aureus TW20]
 gi|282594637|gb|EFB99621.1| MutS2 protein [Staphylococcus aureus A9765]
 gi|294824934|gb|EFG41356.1| MutS2 protein [Staphylococcus aureus A9754]
 gi|302750967|gb|ADL65144.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304340282|gb|EFM06223.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|315196867|gb|EFU27210.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus CGS01]
 gi|320141041|gb|EFW32888.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320143098|gb|EFW34888.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus MRSA177]
 gi|329313812|gb|AEB88225.1| MutS2 protein [Staphylococcus aureus subsp. aureus T0131]
 gi|329730765|gb|EGG67144.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21189]
 gi|364522361|gb|AEW65111.1| mutS2 protein [Staphylococcus aureus subsp. aureus 11819-97]
 gi|365167155|gb|EHM58631.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21209]
 gi|365168596|gb|EHM59934.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21202]
 gi|365224203|gb|EHM65468.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus VCU006]
 gi|365244748|gb|EHM85405.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21232]
 gi|371978726|gb|EHO95967.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21333]
 gi|371981854|gb|EHO99015.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21283]
 gi|374363034|gb|AEZ37139.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus VC40]
 gi|375029330|gb|EHS22658.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-88]
 gi|375039929|gb|EHS32841.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-111]
 gi|377697001|gb|EHT21356.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1114]
 gi|377725128|gb|EHT49243.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG547]
 gi|377742368|gb|EHT66353.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1770]
 gi|377771122|gb|EHT94880.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC93]
 gi|383970969|gb|EID87059.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus CO-23]
 gi|421956381|gb|EKU08710.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus CN79]
 gi|436431619|gb|ELP28972.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus DSM 20231]
 gi|436505251|gb|ELP41179.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21282]
 gi|445562010|gb|ELY18195.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus KT/Y21]
          Length = 782

 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 356/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|418928400|ref|ZP_13482286.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1612]
 gi|377738312|gb|EHT62321.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1612]
          Length = 782

 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 356/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAKYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|344996322|ref|YP_004798665.1| MutS2 protein [Caldicellulosiruptor lactoaceticus 6A]
 gi|343964541|gb|AEM73688.1| MutS2 protein [Caldicellulosiruptor lactoaceticus 6A]
          Length = 786

 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 212/687 (30%), Positives = 346/687 (50%), Gaps = 88/687 (12%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSL----QRYSPLLE 101
           DI+ IL  A +  +L+P EI  V + L+    V   L  A   D   L    +R   L E
Sbjct: 70  DISLILKKARAQAILTPHEILEVEKVLKLSQEVRSYLANA---DSSYLKTIRERLFNLKE 126

Query: 102 LLKNCN--FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME-----NLDSLLK 154
           ++   +  FLT  E             ILD AS  L+ IR +R R +E      L+ +++
Sbjct: 127 IIARIDQTFLTPEE-------------ILDTASPRLKEIR-DRIRRLEARIRDELNKMIR 172

Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
               Q F    + +P+IT R  ++ + +KA HK  +  GI  + S++GAT F+EP   VE
Sbjct: 173 DPKIQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGATLFVEPFVCVE 227

Query: 215 FNNMEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
            +N ++R++ SE  EE   IL  L+  I+ S  EIK   + + E+D+ F +A +A     
Sbjct: 228 ISN-QIRVARSEEKEEIERILQELSQLISDSYNEIKQNFESLSELDILFTKAQWAHQFRA 286

Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
             PIL++  +      IN++  +HPL+    +                            
Sbjct: 287 SKPILNTAGY------INLKKARHPLIEKEKV---------------------------- 312

Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
                  VPID+ +  E  V+VITGPNTGGKT ++KT+GL  L++++G++LPA     + 
Sbjct: 313 -------VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGIFLPADEGSEVC 365

Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
            F  I ADIGD QS+ Q+LSTFS H+  I++I +     +LVL+DEIGSGTDP EG ALA
Sbjct: 366 VFSKIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALA 425

Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
            +IL++L  +    V TTHY +L     ++ RFENA+ EF + TL+PTYR+L G  G SN
Sbjct: 426 KAILKFLFKKGSKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSN 485

Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
           AL I+ ++G   +I++ A+  + +   E      +++   +  +R++LE     A  L  
Sbjct: 486 ALYISSNLGLKEEIVELAKSYMSKKTLEL-----TDIINEMERKRKELEETLENANKLKI 540

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
           E  +L + +E+E +  +     +K + +++ ++   F +   D V + F+   + A + +
Sbjct: 541 EAENLKKTLEEERRRFEAEKQRIKERASREARE---FVQRVEDEVEKLFKELRKIAESLK 597

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVE 690
              ++K+ E          +  +  S  E    S  P+    G++V+VKS  D    V  
Sbjct: 598 EKEMLKQLEEKKREYENLVKSIEQASQKEEKLQSKLPENLRLGQKVYVKSF-DAEGFVES 656

Query: 691 VPGDDDTVLVQYGKMRVRVKKNNIRPI 717
           +P     + V+ G M++ V  +++  I
Sbjct: 657 LPDSKGNLTVRIGIMKLSVNISDVFEI 683


>gi|313896601|ref|ZP_07830150.1| recombination and DNA strand exchange inhibitor protein
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312974786|gb|EFR40252.1| recombination and DNA strand exchange inhibitor protein
           [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 761

 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 217/713 (30%), Positives = 338/713 (47%), Gaps = 79/713 (11%)

Query: 22  KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           +L  +T+ A++++Q Q      I D+   L  A  G  L   E+  +  T++ + NV K 
Sbjct: 21  RLHAETAEAVSVLQMQAPPFGGIYDLRHTLQKATLGSTLEVEELREIMSTMQGMRNV-KY 79

Query: 82  LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
               A+L    L+     +E+L        LE+ +   ID +   + D AS +L  +  E
Sbjct: 80  FFRDADLSLPLLKEKGVRIEILGM------LEKHLQNTID-EHGNLRDDASPELRRVTRE 132

Query: 142 ----RKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
               + R  E L ++L   A Q  FQ     + ++T R  R  + +K  ++   P G+  
Sbjct: 133 MLSAQNRVKERLSTILHDAAYQKCFQ-----EAIVTVRAERYVIPVKQEYRAQFP-GVIH 186

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP   VE NN   ++  +   E   IL  L+ EIA++   +      + 
Sbjct: 187 DRSASGATLFVEPLATVELNNTVRQMELAREQEIRRILQQLSQEIARAADIVSENCTILA 246

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           E+DL FARAG ++ M+   P  +   +V    +      +HPLL                
Sbjct: 247 ELDLIFARAGLSRNMEAYAPTFNRAGYVRLQRA------RHPLL---------------- 284

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
           P                    D  VPIDI++  +  V++ITGPNTGGKT SMKTLG+ +L
Sbjct: 285 P-------------------KDRVVPIDIELGRDFSVLLITGPNTGGKTVSMKTLGILAL 325

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+++G +LP  +   LP +  I ADIGD QS+EQ+LSTFS H   IV IL+      LVL
Sbjct: 326 MAQSGCFLPTASGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIVRILQKAKSNDLVL 385

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
           +DE+G+GTDP EG ALA SI+++L  R    + TTHYA L           NA+ EF   
Sbjct: 386 LDEVGAGTDPDEGAALARSIIEHLLQRRISVIATTHYAALKTYAYGRQGVMNASVEFDTS 445

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLM 555
           TLRPTYR+L G+ G SNA +I++ +G    I+ RAQ+ ++      + H + E +   L 
Sbjct: 446 TLRPTYRLLIGTPGASNAFSISRRLGLADAIVARAQRYID------EDHVRFETVVNELE 499

Query: 556 EERRKLESQA---RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAK 612
           +E+R  E++    R  A   + + +  R   D+     R+  H   +E   + +E   A+
Sbjct: 500 QEKRAYETRQTELRIRAQKISAMEEQLRTERDKFIQAHRKLLHKAREEANGIVRE---AR 556

Query: 613 VQIDTVVQDFENQLRDASADEINSLIKES-ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ 671
              +  ++  + Q  D    E    I+E+ E    A +    P       +       P 
Sbjct: 557 RSAEETIKKLKQQFDDHGVKERRKAIQEARERLTGAYMPQRHPSATKVGQKIRAGEIEP- 615

Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
            G+ VH+  L  +  TV+ V G + T  VQ G +R  VK +    +   K+ +
Sbjct: 616 -GDIVHITRLAQE-GTVLAVQGKELT--VQIGALRTVVKPDECTFVSRKKKNH 664


>gi|302871595|ref|YP_003840231.1| MutS2 family protein [Caldicellulosiruptor obsidiansis OB47]
 gi|302574454|gb|ADL42245.1| MutS2 family protein [Caldicellulosiruptor obsidiansis OB47]
          Length = 786

 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 214/691 (30%), Positives = 356/691 (51%), Gaps = 96/691 (13%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSL----QRYSPLLE 101
           DI+ +L  A +  +L+P EI AV R L+    V   L  A   DG+ L    +R   L E
Sbjct: 70  DISLVLKKAKAQAILTPHEILAVNRILKLSQEVRSYLANA---DGNYLKSSRERLFNLKE 126

Query: 102 LLKNCN--FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME-----NLDSLLK 154
           L    +  FLT  E             ILD AS  L+ IR +R R +E      L+ +++
Sbjct: 127 LTARIDQTFLTPEE-------------ILDTASPRLKDIR-DRIRRLEAKIRDELNRMIR 172

Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
               Q F    + +P+IT R  ++ + +KA HK  +  GI  + S++GAT F+EP   VE
Sbjct: 173 DPKIQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGATLFVEPFVCVE 227

Query: 215 FNNMEVRLSNSEIAEETAILSL-LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
            +N ++R++ SE  EE   L   L+  I+ S  EIK   + + E+D+ F +A +A     
Sbjct: 228 ISN-QIRVARSEEKEEIEKLLQELSQLISDSYNEIKQNFESLSELDILFTKAQWAHQFRA 286

Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
             PIL++  +      IN++  +HPL+    +                            
Sbjct: 287 SKPILNTAGY------INLKKARHPLIKKEKV---------------------------- 312

Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
                  VPID+ +  E  V+VITGPNTGGKT ++KT+GL  L++++G+++PA +   + 
Sbjct: 313 -------VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGVFIPADDRSEVC 365

Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
            F  I ADIGD QS+ Q+LSTFS H+  I++I +     +LVL+DEIGSGTDP EG ALA
Sbjct: 366 VFSKIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALA 425

Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
            +IL++L ++    V TTHY +L     ++ RFENA+ EF + TL+PTYR+L G  G SN
Sbjct: 426 KAILKFLHNKGAKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSN 485

Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
           AL I+ ++G +++II+ A+  + +   E      +++   +  +RR+LE    +A  L +
Sbjct: 486 ALYISSNLGLNKEIIELAKGYMSKKTLEL-----TDIINEMERKRRELEEALESANKLKS 540

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
           E  +L + +E+E +  +     +K + +++ ++ +   + +++ + ++ +         E
Sbjct: 541 EAEELKKTLEEERRRFEAEKQKIKERASKEAREFVQKVEDEVEKLFKELKKIAESLKEKE 600

Query: 634 INSLI----KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLA 686
           +   +    +E E+ + +I +A R        E    S  P+    G++V+VKS  D   
Sbjct: 601 MLKQLEEKKREYENLVKSIEQASR-------KEEKLQSKLPENLRLGQKVYVKSF-DAEG 652

Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
            V  +P     + V+ G M++ V  ++I  I
Sbjct: 653 FVESLPDSKGNLTVRIGIMKLSVNISDIFEI 683


>gi|421150022|ref|ZP_15609678.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus str. Newbould 305]
 gi|394329412|gb|EJE55514.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus str. Newbould 305]
          Length = 782

 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 356/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|418559141|ref|ZP_13123687.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21252]
 gi|371975432|gb|EHO92726.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21252]
          Length = 782

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 356/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|251795420|ref|YP_003010151.1| MutS2 family protein [Paenibacillus sp. JDR-2]
 gi|247543046|gb|ACT00065.1| MutS2 family protein [Paenibacillus sp. JDR-2]
          Length = 789

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 211/700 (30%), Positives = 343/700 (49%), Gaps = 90/700 (12%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
           DI+  L+ A  G  L+P+E+  +  T R    V K +        D+L    P+  L + 
Sbjct: 70  DISASLHRARIGGTLNPAELLDIAATARGARRVKKHI--------DNLHEDDPIPLLFQM 121

Query: 106 CNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ 162
              L+E   LE+ I  CID +  + +D AS +L  IR    R + + +S +++   Q+ +
Sbjct: 122 TEQLSEHKPLEDAIFDCIDDQAEV-MDSASPELASIR----RELRSGESRIREKLEQMIR 176

Query: 163 AGGIDKPL----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
           +  + K L    IT R  R  + +K  ++     GI  + S SGAT F+EP+  V  NN 
Sbjct: 177 SSSVQKMLQDSIITLRNDRYVIPVKQEYRSHF-GGIVHDQSGSGATLFIEPEAIVSMNNK 235

Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
                 +E+ E   IL  LTA  A+   ++ Y  D + ++D A+A+A  A  M    P +
Sbjct: 236 LRETKAAELREIEKILQKLTARAAEHVEDLLYNQDLLGKLDFAYAKARLAHEMKATLPRM 295

Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
           + +        + I+  +HPL+                                     D
Sbjct: 296 NDRGF------LKIKRGRHPLI-----------------------------------APD 314

Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
             VP+D+++  +   +++TGPNTGGKT S+KT+GL SLM+ +GL++PA    +L  FD I
Sbjct: 315 KVVPLDVELGNQFTAIIVTGPNTGGKTVSLKTVGLLSLMAMSGLFVPADEGSQLCVFDSI 374

Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
            ADIGD QS+EQ+LSTFS H++ I+ IL  ++ +SLVL+DE+G+GTDP+EG ALA +IL+
Sbjct: 375 YADIGDEQSIEQSLSTFSSHMTNIIRILGSMTSKSLVLLDELGAGTDPAEGSALAIAILE 434

Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
           ++       + TTHY++L           NA+ EF + TL PTYR+L G  G SNA  IA
Sbjct: 435 HIHKLDSRIIATTHYSELKAYAYNRKGVINASMEFDVATLSPTYRLLVGVPGRSNAFAIA 494

Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
           + +G  + II  A+  V       +  R   +  SL E+R   ES+  TA S+  E+   
Sbjct: 495 ERLGLSQAIIDHARGEV-----SEEDQRVENMIASLEEDRLSAESERNTAESMRREMEAQ 549

Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 638
            +  E E +  + +   +  K  ++  + +  A+ + D ++ D    LR  + +E  S +
Sbjct: 550 RKRHEAELERFEEQRDKMLQKAQEEAHEAVAKARREADQIIAD----LRKLALEEGAS-V 604

Query: 639 KESESAIAAIVEAHR----PDDDFSVSETNTSSFTPQ------FGEQVHVKSLGDKLATV 688
           KE +     ++EA R       + +  +  ++    +       G++V V SL  K   V
Sbjct: 605 KEHK-----LIEAKRRLEEAAPELATKKKRSAGGGAKKPAKIGAGDEVMVYSLNQK-GIV 658

Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
            E+   D T  VQ G M+++V  +++  I    + N   P
Sbjct: 659 AEIGASDAT--VQLGIMKMKVALDDLELIKPVAQLNKQQP 696


>gi|418949118|ref|ZP_13501378.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-157]
 gi|375369683|gb|EHS73552.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-157]
          Length = 782

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 356/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|417901588|ref|ZP_12545464.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21266]
 gi|341845427|gb|EGS86629.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21266]
          Length = 782

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 356/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSVKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKKKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|423072092|ref|ZP_17060854.1| MutS2 family protein [Desulfitobacterium hafniense DP7]
 gi|361857227|gb|EHL09076.1| MutS2 family protein [Desulfitobacterium hafniense DP7]
          Length = 789

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 212/722 (29%), Positives = 348/722 (48%), Gaps = 95/722 (13%)

Query: 24  LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           L +T     +++  PL  +    +I  ++   + G  L+  E+  +R TL+A   V + L
Sbjct: 49  LEETGEGKDILRINPLFSVRGAREIRPLVERCLKGGTLTTDELLQIRDTLKAARVVKQGL 108

Query: 83  TEA-AELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELI 138
            E  AE+         P L+ +++       +EE+I  CI  D +   + D+AS  L  +
Sbjct: 109 QEGKAEV---------PHLKGIMEQVILPKGIEEEITRCITEDGQ---VADQASSVLADL 156

Query: 139 RAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
           R      + R  E LD +++  A Q      +  P++T+R  R  V +K  ++     GI
Sbjct: 157 RRSISRLQTRIRETLDGIIRNPAYQKI----LQDPIVTQRSERYVVPVKQEYRQSF-QGI 211

Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
             + S+SGAT ++EP   V   N    +   E  E   IL LL+A +      I    + 
Sbjct: 212 VHDQSASGATLYIEPMAVVNLGNELREVVLKEQREVQRILLLLSARVEGEAEAIADAHEA 271

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
           +  +D   A+A  ++ M+   PIL+ +  +S   +      +HPLL G            
Sbjct: 272 LARVDFILAKARLSEEMNAGAPILTEKQEISLVQA------RHPLLTGKV---------- 315

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
                                     VP+ I++      VV+TGPNTGGKT ++KT+GL 
Sbjct: 316 --------------------------VPLTIQLGTRFDTVVVTGPNTGGKTVALKTIGLL 349

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
           + M++ GL++PA++  R+  F  I ADIGD QS+EQ+LSTFSGH+  IV+I+E     SL
Sbjct: 350 AAMAQCGLHIPAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIVEKADWRSL 409

Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
           +L+DE+G+GTDP+EG ALA +I+  L +R    V TTHY  L       TR ENA+ EF 
Sbjct: 410 ILLDEVGAGTDPTEGSALAMAIIAELHERGARIVATTHYGALKNFAYNTTRVENASVEFD 469

Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
            ETLRPTYR+L G  G SNA  IA  +G    ++ RA+  V     ER+    ++L ++L
Sbjct: 470 SETLRPTYRLLIGIPGKSNAFYIAGRLGLPEGVLDRARTFV----TEREMQ-VADLIENL 524

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
            + +R+++ + R A      I      ++++++ L+     L AK   Q  + +  A+ +
Sbjct: 525 EDTQREIDLEKRRAREERQAIEKESLGLKEKSQKLEDDYQELMAKARDQATEIVREARRE 584

Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP---- 670
            + ++ + +  L++   D+    I+++   I  +           V + +T   TP    
Sbjct: 585 AERLIDELKLALKEERKDQ--QAIEKTRQGIRKL--------SNKVGDQDTPLRTPHGVE 634

Query: 671 ----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
               + G+ V++  L  K   V+++P D   V VQ G +++ V  + IR I   K   AA
Sbjct: 635 PQEIKLGQMVYMTKLRQK-GQVLKLPNDSGEVFVQAGVIKLNVPLSEIRLIQEEK---AA 690

Query: 727 NP 728
            P
Sbjct: 691 KP 692


>gi|406981818|gb|EKE03215.1| hypothetical protein ACD_20C00234G0037 [uncultured bacterium]
          Length = 790

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 212/719 (29%), Positives = 352/719 (48%), Gaps = 77/719 (10%)

Query: 22  KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           +L N T A   +  +    L  I +I  ++N A  GQ L   ++  +  T+ A   +   
Sbjct: 48  ELQNTTEAKFLLDLAISPPLGGIRNITELINCAKIGQTLRNQDLIDIASTIGASRRLKSF 107

Query: 82  LTEAAELDGDSLQRYSPLLELLKNCNFLTE-LEEKIGFCID--CKLLIILDRASEDLELI 138
            ++         Q  +P L L+    F  + LEE I    D  C+   ++D AS +L+ +
Sbjct: 108 FSK--------YQEETPNLFLVSQNLFENKILEEDIINTFDDSCE---VVDNASPELKRL 156

Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
           R+  K    NL + L  +      +  + +P+ T R  R  + +K  +K  +  GI  + 
Sbjct: 157 RSSYKDQTYNLKNKLNSIINSAEYSKFLQEPVYTLRGDRYVIPVKIEYKSNV-QGIVHDS 215

Query: 199 SSSGATYFMEPKGAVEFNN----MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
           SSSGAT F+EPK  VE NN    +E+++ +    E   IL+ L+  +    +EI+Y +D 
Sbjct: 216 SSSGATLFIEPKSIVELNNNLREIELKIDH----EIKRILAELSNRVGAQAQEIEYTLDS 271

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
           + E+D  FA+A ++  +    P ++++ ++S         +KHP+L+ S           
Sbjct: 272 LAELDFIFAKAKYSILLKATEPAINTERYISLTR------VKHPILITS----------- 314

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
                  +EN           IS+     ++++  +   ++ITG NTGGKT  +KT GL 
Sbjct: 315 -------IENV----------ISN-----NVEIGKDWSSLIITGSNTGGKTVILKTTGLC 352

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
            LM+KAGL++PA+     P F  I ADIGD QS+ QNLSTFSGH++ I+ IL  +  ESL
Sbjct: 353 VLMAKAGLHIPAQEADIYP-FKNIFADIGDEQSVIQNLSTFSGHMTNIISILNQLDNESL 411

Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
           VL+DEIG+GTDPSEG ALA +IL+ L  +    +VTTHY +L  L      F NA+ EF 
Sbjct: 412 VLLDEIGAGTDPSEGSALAQAILEALHKKGARTIVTTHYGELKALAYTQEGFYNASVEFD 471

Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
           +++L PTY+++ G  G SNA+ IAK++G   +I   AQ +        Q+    E+ + L
Sbjct: 472 IDSLAPTYKLIMGLPGKSNAITIAKNLGLSAEISDNAQNIY-----ITQKDPTGEIMEGL 526

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
              +++L   A+   S   E+  L  E   + + ++    +      ++   E+  A+ +
Sbjct: 527 QNTQQELSRNAQKIESTKEELERLETEYNQKLEKINSEKKYALNVYKKKFDTEITKARAE 586

Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
           I  ++++      +  A   ++ + E ES    I    + D +      N      + G 
Sbjct: 587 IKEILEETRRTKSEKVARRASNRLSEIESIQRNISAQDQEDLEPQYEPINWDDI--KVGS 644

Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYG------KMRVRVKKNNIRPIPNSKRKNAAN 727
            V +K L  + A ++ +P  +  V VQ G      K++  VK ++I+P  +   KN AN
Sbjct: 645 PVFIKGLNQE-AILLSMPDKNKNVQVQVGLLKTTVKIQKLVKSSSIKPKEDPIPKNRAN 702


>gi|418644704|ref|ZP_13206844.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-55]
 gi|375025107|gb|EHS18517.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-55]
          Length = 781

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 206/708 (29%), Positives = 355/708 (50%), Gaps = 98/708 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV-------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKNKRKVKPTKMVTRQN 698


>gi|410456530|ref|ZP_11310390.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           bataviensis LMG 21833]
 gi|409927914|gb|EKN65039.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           bataviensis LMG 21833]
          Length = 785

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 220/705 (31%), Positives = 342/705 (48%), Gaps = 89/705 (12%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
            EE  +L  +T  A  +++ +  + LS   DI   +  +V G +LSP E+  +  T+ A 
Sbjct: 40  FEEVVRLQTETDEAATVLRIKGNVPLSGTHDIRAHIKRSVIGGVLSPHELNQIASTIHAS 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
             + K+  E    +   L   S L+E ++    LT+LE++I   ID +   +LD AS+ L
Sbjct: 100 RQM-KRFIEDIAAERTEL---SILMEQVERIIPLTDLEQEIKHAID-ESGEVLDSASDLL 154

Query: 136 ELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
             +R + + N     E L+S+++   A    +  I    +T R  R  + +K  ++    
Sbjct: 155 RTLRHQLRSNESRVREKLESMIRSSNASKMLSDAI----VTIRNDRFVIPVKQEYRGHY- 209

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
            GI  + S+SG T F+EP+  V+ NN    +   E  E   IL+ L+A +A+ E E+K +
Sbjct: 210 GGIIHDQSASGQTLFIEPQVIVQLNNQLQDIRVKEQLEIDRILTELSANVAEYENELKVI 269

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
           ++ +  +D  FA+A F + +    P+++++  +S   +      +HPL+           
Sbjct: 270 VEILANLDFIFAKARFGKKIKASKPLMNNEGRISLYKA------RHPLI----------- 312

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
                P+   V N                   DI +  E   +VITGPNTGGKT ++KTL
Sbjct: 313 -----PIDEVVAN-------------------DIMLGNEFTTIVITGPNTGGKTVTLKTL 348

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
           GL SLM++AGL +PA +   L  FD + ADIGD QS+EQ+LSTFS H+  IVDIL  V  
Sbjct: 349 GLCSLMAQAGLQVPALDGSELAVFDAVYADIGDEQSIEQSLSTFSSHMVNIVDILNSVDF 408

Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
            SLVL DE+G+GTDP EG ALA SIL  +  R    + TTHY +L           NA+ 
Sbjct: 409 NSLVLFDELGAGTDPQEGAALAISILDEVHKRGARVIATTHYPELKAYGYNREGVLNASV 468

Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
           EF +ETL PTY++L G  G SNA  I+K +G    +IQ A+  V            SE  
Sbjct: 469 EFDVETLSPTYKLLLGVPGRSNAFEISKRLGLSDWVIQAARSHV------------SEDT 516

Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
             + +    LES  R A     E  D  ++ E    DL ++      K+   +++    A
Sbjct: 517 NQIDKMIASLESSKRQAEEEQMEARDYLKQAEKLHLDLQKQMIEFYEKKDSMLEKAAEKA 576

Query: 612 KVQIDTVVQDFENQLRDASA--DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
              +D   Q+ E  +RD      E ++ IKE E     +++A R   D +          
Sbjct: 577 ADIVDEAKQEAEQVIRDLRKMRTEKHAEIKEHE-----LIDAKRRLQDAA---------- 621

Query: 670 PQFGEQVHVKSLGDKLATVVEVPGDDDTVLV--QYGKMRVRVKKN 712
           P+  + V++ +  +K+ T   +PGD+  VL   Q G +  +V  N
Sbjct: 622 PEIKKSVNLANKKNKMHTY--MPGDEVKVLTFDQKGTLLEKVSAN 664


>gi|89893029|ref|YP_516516.1| hypothetical protein DSY0283 [Desulfitobacterium hafniense Y51]
 gi|219666299|ref|YP_002456734.1| MutS2 family protein [Desulfitobacterium hafniense DCB-2]
 gi|89332477|dbj|BAE82072.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219536559|gb|ACL18298.1| MutS2 family protein [Desulfitobacterium hafniense DCB-2]
          Length = 789

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 212/722 (29%), Positives = 348/722 (48%), Gaps = 95/722 (13%)

Query: 24  LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           L +T     +++  PL  +    +I  ++   + G  L+  E+  +R TL+A   V + L
Sbjct: 49  LEETGEGKDILRINPLFSVRGAREIRPLVERCLKGGTLTTDELLQIRDTLKAARIVKQGL 108

Query: 83  TEA-AELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELI 138
            E  AE+         P L+ +++       +EE+I  CI  D +   + D+AS  L  +
Sbjct: 109 QEGKAEV---------PHLKGIMEQVILPKGIEEEITRCITEDGQ---VADQASSVLADL 156

Query: 139 RAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
           R      + R  E LD +++  A Q      +  P++T+R  R  V +K  ++     GI
Sbjct: 157 RRSISRLQTRIRETLDGIIRNPAYQKI----LQDPIVTQRSERYVVPVKQEYRQSF-QGI 211

Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
             + S+SGAT ++EP   V   N    +   E  E   IL LL+A +      I    + 
Sbjct: 212 VHDQSASGATLYIEPMAVVNLGNELREVVLKEQREVQRILLLLSARVEGEAEAIADAHEA 271

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
           +  +D   A+A  ++ M+   PIL+ +  +S   +      +HPLL G            
Sbjct: 272 LARVDFILAKARLSEEMNAGAPILTEKQEISLVQA------RHPLLTGKV---------- 315

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
                                     VP+ I++      VV+TGPNTGGKT ++KT+GL 
Sbjct: 316 --------------------------VPLTIQLGTRFDTVVVTGPNTGGKTVALKTIGLL 349

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
           + M++ GL++PA++  R+  F  I ADIGD QS+EQ+LSTFSGH+  IV+I+E     SL
Sbjct: 350 AAMAQCGLHIPAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIVEKADWRSL 409

Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
           +L+DE+G+GTDP+EG ALA +I+  L +R    V TTHY  L       TR ENA+ EF 
Sbjct: 410 ILLDEVGAGTDPTEGSALAMAIIAELHERGARIVATTHYGALKNFAYNTTRVENASVEFD 469

Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
            ETLRPTYR+L G  G SNA  IA  +G    ++ RA+  V     ER+    ++L ++L
Sbjct: 470 SETLRPTYRLLIGIPGKSNAFYIAGRLGLPEGVLDRARTFV----TEREMQ-VADLIENL 524

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
            + +R+++ + R A      I      ++++++ L+     L AK   Q  + +  A+ +
Sbjct: 525 EDTQREIDLEKRRAREERQAIEKESLGLKEKSQKLEDDYQELMAKARDQATEIVREARRE 584

Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP---- 670
            + ++ + +  L++   D+    I+++   I  +           V + +T   TP    
Sbjct: 585 AERLIDELKLALKEERKDQ--QAIEKTRQGIRKL--------SNKVGDQDTPLRTPHGVE 634

Query: 671 ----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
               + G+ V++  L  K   V+++P D   V VQ G +++ V  + IR I   K   AA
Sbjct: 635 PQEIKLGQMVYMTKLRQK-GQVLKLPNDSGEVFVQAGVIKLNVPLSEIRLIQEEK---AA 690

Query: 727 NP 728
            P
Sbjct: 691 KP 692


>gi|423683336|ref|ZP_17658175.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           licheniformis WX-02]
 gi|383440110|gb|EID47885.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           licheniformis WX-02]
          Length = 785

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 223/727 (30%), Positives = 358/727 (49%), Gaps = 81/727 (11%)

Query: 15  KSLEESQKL---LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
           +SLEE +KL   +++    L +  S P     + DI   L  A  G +LSP+E+  +   
Sbjct: 38  RSLEEVKKLQEEVDEAGTVLRLKGSAPF--GGLTDIRKALRRAEIGSILSPAELTEISGL 95

Query: 72  LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           L A   + K   E    DG  +       E L     L+ELE  I  CID    + LD A
Sbjct: 96  LYAAKQM-KHFLEGLFEDGVEIPYLHQYAEKLIP---LSELERDINSCIDDHGEV-LDHA 150

Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
           SE L  IR + +    R  + L+S+L+  +AQ      +   +IT R  R  + +K  ++
Sbjct: 151 SETLRGIRTQLRTLESRIRDRLESMLRSSSAQKM----LSDTIITIRNDRFVIPVKQEYR 206

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
                GI  + SSSGAT F+EP+  V+ NN   +   +E  E   IL +LT + A+   E
Sbjct: 207 SSY-GGIVHDQSSSGATLFIEPQAIVDMNNALRQAKVNEKQEIERILRVLTEKTAEHTNE 265

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           + + +  +  +D  FA+A +A+    V P +++  +V    +      +HPLL       
Sbjct: 266 LFHDVKVLQTLDFIFAKAKYAKATKAVKPAVNADGYVRLIQA------RHPLL------- 312

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                    PL                   D  VP DI++  E   +VITGPNTGGKT +
Sbjct: 313 ---------PL-------------------DEVVPNDIELGGEYTTIVITGPNTGGKTVT 344

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KTLGL ++M+++GL++PA+       FD + ADIGD QS+EQ+LSTFS H+  IVDIL+
Sbjct: 345 LKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILK 404

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
            ++  SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           
Sbjct: 405 DMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTGARVIATTHYPELKAYGYNRENVI 464

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NA+ EF ++TL PTY++L G  G SNA  I+K +G    +I RA     +     + +  
Sbjct: 465 NASVEFDIDTLSPTYKLLIGVPGRSNAFEISKRLGLPDYLIGRA-----KAEMTAEHNEV 519

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
             +  SL + +++ E++ +   ++ AE   L+R+++ +  +       L  +  Q+  ++
Sbjct: 520 DTMIASLEDSKKRAEAELKETEAIRAEAEALHRDLQQQISEWQEIKDKLYEEAEQKAAEK 579

Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETN 664
           +  A  + D ++Q       D  A + + LI   K  E A+ +  +A +P    +  +T+
Sbjct: 580 VKAAMKEADDIIQSLRMIKEDHKAFKDHELIEAKKRLEEAVPSFEKAKKP----AQKKTD 635

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-----PIPN 719
                P  G++V V + G K  T++E  G  +   VQ G ++++VK+ ++      P P 
Sbjct: 636 KRELKP--GDEVKVLTFGQK-GTLLEKTGAAEWN-VQIGILKMKVKEKDLEFLKSAPEPE 691

Query: 720 SKRKNAA 726
            ++  AA
Sbjct: 692 KQKTIAA 698


>gi|418598399|ref|ZP_13161909.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21343]
 gi|374399756|gb|EHQ70892.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21343]
          Length = 782

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 356/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRIETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIFNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|78044071|ref|YP_360393.1| DNA mismatch repair protein MutS [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|123756755|sp|Q3ABU1.1|MUTS2_CARHZ RecName: Full=MutS2 protein
 gi|77996186|gb|ABB15085.1| DNA mismatch repair protein MutS [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 777

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 202/708 (28%), Positives = 354/708 (50%), Gaps = 76/708 (10%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           +KLL +    L+ ++ + +DLS + D + I        +L+  EI  + + L+   + + 
Sbjct: 45  EKLL-EVEEGLSYLRFKTVDLSVLSDFSEIFLKLSKESMLTGQEIYRLGQLLKVSKDTFF 103

Query: 81  KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI--GFCIDCKLLIILDRASEDLELI 138
           +++  A         +  L +++K   F   L + I   F  +     + D AS +L+ I
Sbjct: 104 EISRGA---------FPRLKQIVKLLFFDEALVKDIERSFWPEG---TVKDEASPELKRI 151

Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
           R +  R  + +   ++K   +   A  + +PLI+ R  R  + +KAS+K  +P GI  + 
Sbjct: 152 RGQIARLKDKMREAVEKYLKEPELAKYLQEPLISVRGDRFVLPVKASYKSQVP-GIIHDR 210

Query: 199 SSSGATYFMEPKGAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           S++G T F+EP  AVE  N    + L   EI E+  IL   T  +A +  EIK   + + 
Sbjct: 211 SNTGQTLFIEPYSAVEAGNELKTLELQEKEIIEK--ILKDFTQRLACNLTEIKRTYELLG 268

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           EIDL  A+A  A  +D   P +S    +SF  +      +HPLL   +            
Sbjct: 269 EIDLIVAKARLALELDAYKPRISENGVLSFKQA------RHPLLGKKA------------ 310

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                                   VP D+ +  E  +++ITGPNTGGKT ++KT+G+ ++
Sbjct: 311 ------------------------VPFDLTLGKEFDLLIITGPNTGGKTVTLKTIGILTI 346

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++AGL++PA     +  F  +  DIGD QS+ Q+LSTFS H+  +  ILE      LVL
Sbjct: 347 MARAGLFIPASPETEIGLFGEVYVDIGDEQSIVQSLSTFSSHLLNLKFILENAREGDLVL 406

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
           +DE+G+GTDP EG ALA +IL+ LR +    V TTH ++L+    +  R ENA+ EF  E
Sbjct: 407 LDELGTGTDPREGAALAKAILEELRGKKVKVVATTHTSELAAYAIETERVENASVEFDPE 466

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           +L+PTYR+  G  G SNAL IA+ +G   +II++A+  +     + ++ +  +L   + +
Sbjct: 467 SLKPTYRLHIGKPGRSNALYIAQGLGLKEQIIEKAKSFL-----KEEELKLDKLIFDVEQ 521

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
           E+R+LE      A+L   + +   ++ DE ++L++    +  K  ++ QQ+L   + +  
Sbjct: 522 EKRQLEKAKEEVANLLISLKEKEAKLNDELENLEKTKEEIIRKYREKYQQKLLEIERKGK 581

Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQV 676
            V+++ + +++      +  L++E+               +F++       + P+ GE V
Sbjct: 582 LVIEEIKEKIKTYEEKNLAKLLEEARQKTKEF------SQNFALPFEPIKPYRPKVGETV 635

Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
            +  +G K A V+ V   ++  +VQ G M++ V  + IRP    +++N
Sbjct: 636 ELVEVGQK-AEVLAV--GENYAIVQAGIMKLNVSFDQIRPAQKQEKEN 680


>gi|417895692|ref|ZP_12539670.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21235]
 gi|341841369|gb|EGS82830.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21235]
          Length = 782

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINKT--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|418316581|ref|ZP_12928018.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21340]
 gi|365240860|gb|EHM81619.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21340]
          Length = 782

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|383754385|ref|YP_005433288.1| putative MutS2 protein [Selenomonas ruminantium subsp. lactilytica
           TAM6421]
 gi|381366437|dbj|BAL83265.1| putative MutS2 protein [Selenomonas ruminantium subsp. lactilytica
           TAM6421]
          Length = 792

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 225/701 (32%), Positives = 350/701 (49%), Gaps = 85/701 (12%)

Query: 26  QTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEA 85
           QT+ A+ ++      L  I DI  +L  A  G +L   E+  +  T+ A+  + K     
Sbjct: 49  QTTEAVKVLSMSAPPLGGIRDIRLLLKKAGKGAILELEELQNIMSTMYAMRTI-KYFFRD 107

Query: 86  AELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK-- 143
            E++   LQ ++  LE+L       +LE  +   ID    +  D AS +L  IR E K  
Sbjct: 108 LEMESPILQEWARSLEIL------GQLERNLNNVIDEHGNMRED-ASVELRRIRRELKSS 160

Query: 144 --RNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
             R  + ++++L   A Q +FQ       ++T R  R  + +KA ++   P G+  + S+
Sbjct: 161 QTRIKDKINAILHDGAYQKMFQ-----DAIVTVRDERYVIPVKAEYRAHFP-GLIHDQSA 214

Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
           SG+T F+EP   VE NN   +L+ +E  E   IL  L+ EI + +  +    + + +ID 
Sbjct: 215 SGSTLFIEPMAVVELNNDVKQLTLAEQQEIQRILRQLSGEIQREKETLSANCEILGDIDF 274

Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
            FA+A  A  M  V P+L+ +      ++      +HPL+                    
Sbjct: 275 TFAKARLANAMKAVRPLLNEEGRTVLSNA------RHPLI-------------------- 308

Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
                            D  VP  I +  + R+++ITGPNTGGKT +MKTLGL  LM++A
Sbjct: 309 ---------------AVDKVVPTTISIGQDYRMLLITGPNTGGKTVTMKTLGLLVLMAQA 353

Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
           GLYLP      +  +  I ADIGD QS+EQ+LSTFS H++ IV IL+ V  + L+L+DE+
Sbjct: 354 GLYLPVDQGSEIALYANIYADIGDEQSIEQSLSTFSAHMTHIVSILDKVESDDLLLLDEL 413

Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
           G+GTDP EG ALA SIL+ L +     + TTHY++L          ENA  EF +ETLRP
Sbjct: 414 GAGTDPEEGAALAMSILEKLLEVQATTIATTHYSELKTFAYTREGIENACVEFDIETLRP 473

Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL-YQSLMEERR 559
           TYR+L G  G SNA  I+K +G    +I RAQ+LV +    + +H  +EL  + +M E+R
Sbjct: 474 TYRLLIGIPGASNAFAISKRLGLADSLILRAQQLV-KADHAQFEHVINELENEKMMYEQR 532

Query: 560 K---LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
                E QAR    L  +++    E+  +  D+ R+A    A   +Q ++E         
Sbjct: 533 NADIAERQARV-KKLEEKLLKAKEELSQKKGDIIRKAKDKSAALIRQTRRE--------- 582

Query: 617 TVVQDFENQLRDASADE-INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP----Q 671
              ++  NQL++   D+ I +  +  ++A A I EA    +   +++            +
Sbjct: 583 --SEEVINQLKEQFDDQGIRARQQAIQNARAKINEASAKANPGIMAQKGVGQRIDLKKIR 640

Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
            G+ V+VK L D+  TV+E+ G D T  VQ G +R ++K N
Sbjct: 641 VGDTVYVKKL-DQKGTVLEIQGKDLT--VQVGALRTKLKAN 678


>gi|418312639|ref|ZP_12924148.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21334]
 gi|365238284|gb|EHM79121.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21334]
          Length = 782

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVKKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|253731756|ref|ZP_04865921.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|253724485|gb|EES93214.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
          Length = 782

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|158320865|ref|YP_001513372.1| MutS2 family protein [Alkaliphilus oremlandii OhILAs]
 gi|229486331|sp|A8MHU4.1|MUTS2_ALKOO RecName: Full=MutS2 protein
 gi|158141064|gb|ABW19376.1| MutS2 family protein [Alkaliphilus oremlandii OhILAs]
          Length = 790

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 218/687 (31%), Positives = 347/687 (50%), Gaps = 64/687 (9%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I D++  L     G  L P ++  ++ TL A   +   L      D      Y  + 
Sbjct: 65  LGGIHDVSQYLRRTEIGSYLDPGQLLQLKETLAAARRMKTFLK-----DDKKESTYPIIQ 119

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
           EL  N + L  +E+KI  CI  +  +  D AS +L  IR  R+ + +N D++  K+ + I
Sbjct: 120 ELGNNISSLKHIEDKIELCIISETELS-DNASPELRNIR--RQISSKN-DAIRNKLNSII 175

Query: 161 FQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
             A     +  P+IT R+ R  V +K  H+  +P G+  + SSSGAT F+EP   VE NN
Sbjct: 176 TSASNQKYLQDPIITMRQDRYVVPVKQEHRGNIP-GLIHDQSSSGATIFVEPMAVVELNN 234

Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
               L   E  E   IL  + A IA+   +IK     + E+D  FA+   +  M  V P+
Sbjct: 235 QLKELRLKEQVEIERILMEIAAMIAERSDDIKSNQIILKELDFIFAKGKLSVEMRAVEPV 294

Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
           L++   +S      I+  +HPLL                P    V N+ M +G       
Sbjct: 295 LNTNKKIS------IKNGRHPLL----------------PSNKVVPNT-MWLGE------ 325

Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
           DF              +VITGPNTGGKT ++KTLGL +LM+++GL++PA    +L  FD 
Sbjct: 326 DF------------HTLVITGPNTGGKTVTLKTLGLLTLMAQSGLHVPADYGTKLAIFDQ 373

Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
           + ADIGD QS+EQ+LSTFS H++ IV+I++ V+ +SLVL DE+G+GTDP+EG ALA +IL
Sbjct: 374 VFADIGDEQSIEQSLSTFSSHMTNIVNIMDNVTEQSLVLFDELGAGTDPTEGAALAMAIL 433

Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
             LR+   + V TTHY++L          ENA+ EF + TL PTY++L G  G SNA  I
Sbjct: 434 NSLREMGTVTVATTHYSELKQYALSTEGVENASVEFDVNTLSPTYKLLIGVPGKSNAFEI 493

Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 577
           ++ +G    +IQR+++L+      R+  +  +L Q++ + R   E +   AA L  E   
Sbjct: 494 SRKLGLSDFLIQRSKELL-----TREDIQFEDLLQNIEKNRSTAEKEKDEAARLRMETQK 548

Query: 578 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL 637
           L  E  ++ + L  +   L +   ++  + +  AK+  D +V++ +    +    E+N  
Sbjct: 549 LREEYYEKKQQLQTQKEKLISDAKREAYKIVKQAKLDADEIVENLKTLRAELEEKEMNKK 608

Query: 638 IKESESAIAAIVE--AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD- 694
           I+E+   ++  +   A    +   +          + GE V++ SL +++  V+ +P D 
Sbjct: 609 IEEARKNLSDQMGKLAENMGEKLVLKTNKKPPKNLKIGESVNILSL-NQIGYVI-LPEDA 666

Query: 695 DDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           +  V +Q G M+V +  +N+  I   K
Sbjct: 667 NGEVQLQVGIMKVNMHVSNLERIKEEK 693


>gi|312793836|ref|YP_004026759.1| muts2 family protein [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180976|gb|ADQ41146.1| MutS2 family protein [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 786

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 210/684 (30%), Positives = 346/684 (50%), Gaps = 82/684 (11%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQ-RYSPLLELLK 104
           DI+ IL  A +  +L+P EI  V + L+    V   L  A      ++Q R   L E++ 
Sbjct: 70  DISLILKKARAQAILTPHEILEVEKVLKLSQEVRSYLANADSSYLKTIQERLFNLKEIIA 129

Query: 105 NCN--FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME-----NLDSLLKKVA 157
             +  FLT  E             ILD AS  L+ IR +R R +E      L+ +++   
Sbjct: 130 RIDQTFLTPEE-------------ILDTASPRLKEIR-DRIRRLEARIRDELNKMIRDPK 175

Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
            Q F    + +P+IT R  ++ + +KA HK  +  GI  + S++G+T F+EP   VE +N
Sbjct: 176 IQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGSTLFVEPFVCVEISN 230

Query: 218 MEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
            ++R++ SE  EE   IL  L+  I+ S  EIK   + + E+D+ F +A +A       P
Sbjct: 231 -QIRVARSEEKEEIERILQELSQLISDSYNEIKQNFESLSELDILFTKARWAHQFRASKP 289

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
           IL++  +      IN++  +HPL+    +                               
Sbjct: 290 ILNTAGY------INLKKARHPLIEKEKV------------------------------- 312

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
               VPID+ +  E  V+VITGPNTGGKT ++KT+GL  L++++G++LPA     +  F 
Sbjct: 313 ----VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGMFLPADEGSEVCVFS 368

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            I ADIGD QS+ Q+LSTFS H+  I++I +     +LVL+DEIGSGTDP EG ALA +I
Sbjct: 369 KIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALAKAI 428

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L++L  +    V TTHY +L     ++ RFENA+ EF + TL+PTYR+L G  G SNAL 
Sbjct: 429 LKFLFKKGSKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSNALY 488

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I+ ++G   +I++ A+  + +   E      +++   +  +R++LE     A  L  E  
Sbjct: 489 ISSNLGLKEEIVELAKSYMSKKTLEL-----TDIINEMERKRKELEETLENANKLKIEAE 543

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 636
           +L + +E+E +  +     +K + +++ ++   F +   D V + F+   + A + +   
Sbjct: 544 NLKKTLEEERRRFEAEKQRIKERASREARE---FVQRVEDEVEKLFKELRKIAESLKEKE 600

Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPG 693
           ++K+ E          +  +  S  E    S  P+    G++V+VKS  D    V  +P 
Sbjct: 601 MLKQLEEKKREYENLVKSIEQASQKEEKLQSKLPENLRLGQKVYVKSF-DAEGFVESLPD 659

Query: 694 DDDTVLVQYGKMRVRVKKNNIRPI 717
               + V+ G M++ V  +++  I
Sbjct: 660 SKGNLTVRIGIMKLSVNISDVFEI 683


>gi|253733620|ref|ZP_04867785.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|253728419|gb|EES97148.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           subsp. aureus TCH130]
          Length = 782

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 208/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYG--KMRVRV------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G  KM++ +      +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLSIEDLEKKQKEKVKPTKMVTRQN 699


>gi|442804258|ref|YP_007372407.1| MutS2 protein MutS [Clostridium stercorarium subsp. stercorarium
           DSM 8532]
 gi|442740108|gb|AGC67797.1| MutS2 protein MutS [Clostridium stercorarium subsp. stercorarium
           DSM 8532]
          Length = 794

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 213/719 (29%), Positives = 338/719 (47%), Gaps = 87/719 (12%)

Query: 18  EESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           EE ++ L +T+ A+  +++     L  I DI   +  A +G +L P E+  +   LR   
Sbjct: 41  EEIKRTLRETTDAVTCILRKGSPPLGGIHDIRPYIQRAEAGGMLYPGELLKIADVLRVSR 100

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
           N+   +++    D   L+  + +  L         LEE++   I+ +  +  D AS  L 
Sbjct: 101 NLKNYVSQ----DKMELEETNTVYVLCSGLGTDRTLEERLNQAIENEEELS-DYASPALA 155

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            IR + +R  + +   L  +         +   ++T R  R  + +KA ++   P G+  
Sbjct: 156 AIRRDIRRMQDAVKDKLNSIIRSAQNRKIMQDAVVTLRGDRYVIPVKAEYRSQFP-GLVH 214

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           +VS SGAT F+EP   VE NN   +L   E  E   IL+ LT E+AK    +K  +  + 
Sbjct: 215 DVSQSGATIFVEPMAVVELNNEIRQLKIKEEREVERILTELTGEVAKISEMLKANVKLLA 274

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
            ID  FA+A  +  + G  P+L+ +  +           +HPL+               +
Sbjct: 275 LIDFVFAKARLSLDLKGTEPVLNKERRIVIKKG------RHPLI---------------D 313

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
           P                       VP+DI +  +   +VITGPNTGGKT ++KT+GL  L
Sbjct: 314 PA--------------------VVVPVDISLGEDFTTMVITGPNTGGKTVTLKTMGLFVL 353

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++AGL++PA  +  +  F  + ADIGD QS+EQ+LSTFS H++ IV IL  V   SLVL
Sbjct: 354 MTQAGLHIPAAENSEMCVFTKVFADIGDEQSIEQSLSTFSAHMTNIVGILREVDENSLVL 413

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP+EG ALA +IL  L  R    + TTHY++L           NA  EF +E
Sbjct: 414 FDELGAGTDPTEGAALAKAILDRLTKRGIRTMATTHYSELKIYAMTTPGVRNACCEFDVE 473

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE----------------RLRP 540
           TLRPTYR+L G  G SNA  I+  +G D  II+ A++ +                 RL  
Sbjct: 474 TLRPTYRLLIGIPGRSNAFAISLRLGLDEGIIEEAKRFMRGEDIQFEELLSDIQKNRLET 533

Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
           E+++ R     + +   R+  E Q +        I++  R+   EA+ +   A   +A+E
Sbjct: 534 EKERERAYRELKEIERLRQAAEEQRKKTEDEKESILNQARK---EARAILANARR-QAEE 589

Query: 601 TQQVQQELNFAKVQ--IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
             +  +EL  A  Q  ID  + +    LR          + E ++ +A  +   R D   
Sbjct: 590 IMERLKELEKAYQQRNIDREMMELRQNLRKT--------MNELDAQMAETILPRRGDG-- 639

Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
                   +  P  G+ V + +L  +  TV+E P  D  VL+Q G M+V++    ++P+
Sbjct: 640 ----KPPENLKP--GDTVMIINLNQR-GTVLEAPDKDGNVLIQAGIMKVKMHITQLKPV 691


>gi|408356333|ref|YP_006844864.1| MutS2 protein [Amphibacillus xylanus NBRC 15112]
 gi|407727104|dbj|BAM47102.1| MutS2 protein [Amphibacillus xylanus NBRC 15112]
          Length = 783

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 201/638 (31%), Positives = 319/638 (50%), Gaps = 66/638 (10%)

Query: 98  PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSL 152
           P++ EL+     L  LE +I  CID    + LD AS  L  IR + + N     + LDSL
Sbjct: 117 PIIRELVGQIELLNHLEREIKSCIDDNGHV-LDGASSKLRQIRMKIRTNESRIRDRLDSL 175

Query: 153 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
            K  +  +  A      ++T R  R  + +K  ++     GI  + SSSG T F+EP+  
Sbjct: 176 TKSKSKMLSDA------IVTIRNDRYVLPVKQEYRGAF-GGIVHDQSSSGQTLFIEPQVV 228

Query: 213 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
           VE NN        E AE   IL  L+ EI      + + +  + ++D  FARA   + M 
Sbjct: 229 VEINNQLSEARAQEKAEIERILRQLSQEIGTHHPYLTHNVKILTQLDFIFARAKLGRSMK 288

Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
              P ++ Q        I+I+  +HPLL                       N +  V + 
Sbjct: 289 AAMPKMNDQG------IIDIKQARHPLL-----------------------NEDEVVAN- 318

Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
                      DI +  +   +VITGPNTGGKT ++K +GLA+LM+++GL +PA +  RL
Sbjct: 319 -----------DILLGEDYHAIVITGPNTGGKTVTLKLVGLATLMAQSGLQVPALDGCRL 367

Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
             FD + ADIGD QS+EQ+LSTFS H+++IV IL+ V+ +SLVL DE+G+GTDP EG AL
Sbjct: 368 AVFDEVFADIGDEQSIEQSLSTFSSHMTQIVKILKQVNHKSLVLFDELGAGTDPQEGAAL 427

Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
           A +IL Y+ ++    + TTHY +L           NA+ EF +++L+PTYR+L G  G S
Sbjct: 428 AMAILDYVVNKKARVIATTHYPELKAYGYNRDGVINASVEFDVKSLQPTYRLLIGVPGRS 487

Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 572
           NA  I++ +G D +II+  ++L+     +  +H    + +SL   RR+ E     A    
Sbjct: 488 NAFEISRRLGLDDQIIEAGKQLI-GTDTKSVEH----MIESLDTARRQAEQDYDDAERTL 542

Query: 573 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 632
            E   L  ++  E +  D+    L  K  +  Q+ +  A+ +   +V+        AS  
Sbjct: 543 QEAEALRDQLRKELEKFDQERERLYQKAEETAQKAIEKARQEATEIVESIRQMQHGASLK 602

Query: 633 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 692
           E   +        AA     +  ++ ++  +   +F  + G++V+V +L ++  T++ + 
Sbjct: 603 EHEWIEARKRLDQAAPNLTDKRQENKALHTSAKQTF--EVGDEVNVLTL-NQNGTIIAIN 659

Query: 693 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
            DDD + VQ G M+++VKK ++R I   KR+N     P
Sbjct: 660 ADDD-IQVQIGVMKLKVKKRDLRLI---KRENPIVAKP 693


>gi|23099579|ref|NP_693045.1| DNA mismatch repair protein [Oceanobacillus iheyensis HTE831]
 gi|81746034|sp|Q8EPI1.1|MUTS2_OCEIH RecName: Full=MutS2 protein
 gi|22777809|dbj|BAC14080.1| DNA mismatch repair protein [Oceanobacillus iheyensis HTE831]
          Length = 782

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 220/728 (30%), Positives = 357/728 (49%), Gaps = 98/728 (13%)

Query: 16  SLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           SL++   L ++T  A  +++ +Q + L  I DI   +  +  G +LS  E   V  TL  
Sbjct: 39  SLDKINMLQDETDEAAKIIRLNQAIPLGGITDIRASVKRSSIGGILSTDECLDVANTLYG 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
             NV   +    ELD        P+L EL+++   + ELE+ I  CID    I +D AS 
Sbjct: 99  SRNVKNTIENMEELD-------IPILKELVEHITPIRELEQAIKSCIDDHGHI-MDGASS 150

Query: 134 DLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L  IR+       R  E L++  +  +  +  A      +IT R  R  + +K  ++  
Sbjct: 151 QLRSIRSSIRTLESRIREKLENYTRSNSKMLSDA------IITIRNDRYVLPVKQEYRGA 204

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
           +  GI  + S+SG T FMEPK  V+ NN      + E  E   IL  L+ ++A  E+++ 
Sbjct: 205 I-GGIVHDQSASGQTLFMEPKAVVDINNSLHESKSKEQLEIERILKDLSNQVASYEQDLL 263

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
             +  +  ID  +AR   AQ M    P ++ + ++    +      +HP++         
Sbjct: 264 ENVKVLTNIDFIYARGKLAQAMKASRPKMNDEGYMKMQQA------RHPMI--------- 308

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                  P+   V N                   DI+   E   +VITGPNTGGKT ++K
Sbjct: 309 -------PIDEVVAN-------------------DIEFGREYTSIVITGPNTGGKTVTLK 342

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
            +GL +LM+++GL +PA +   +P FD + ADIGD QS+EQNLSTFS H++ IVDI++ +
Sbjct: 343 LVGLCTLMAQSGLQVPALDGCEMPVFDEVFADIGDEQSIEQNLSTFSSHMTNIVDIMKKI 402

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
           +  SLVL DE+GSGTDP EG ALA +IL  +  +    + TTHY +L        +  NA
Sbjct: 403 TDRSLVLFDELGSGTDPQEGAALAMAILDEVISKQARVIATTHYPELKAYGYNREQVVNA 462

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF++ETL+PTYR+L G  G SNA +I+  +G +R  I+RA+ L+  +  +  ++  + 
Sbjct: 463 SVEFNVETLKPTYRLLIGVPGRSNAFDISTRLGLERATIERAKSLI-GVDSKSVENMIAS 521

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
           L +S +E  +  E     A  +  E   L   +E E    +++   L  K  ++ ++ + 
Sbjct: 522 LEKSHLEAEQDYEQ----AHDVLLESEKLRNALEHEWNLFEQKKEKLYKKAEEKAEKAIQ 577

Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET---NTS 666
            A+ + +T+V +   Q++D++       +KE E      +EA +  D+   + T   N  
Sbjct: 578 KAREEAETIVSEM-RQMKDSAG------LKEHE-----WIEARKMLDEAKPNLTKNGNQK 625

Query: 667 SFTP--------QFGEQVH---VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
              P        Q G+++    V  +G+ L  V      D   LVQ G M+V+VK+ ++ 
Sbjct: 626 QVDPKPVEDRQLQPGDEIKLLTVNQMGEVLERV-----SDKEYLVQVGIMKVKVKRKDLE 680

Query: 716 PIPNSKRK 723
            I   K+K
Sbjct: 681 LIRKPKKK 688


>gi|387780256|ref|YP_005755054.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           subsp. aureus LGA251]
 gi|416839782|ref|ZP_11903140.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus O11]
 gi|416847321|ref|ZP_11907055.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus O46]
 gi|323440694|gb|EGA98404.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus O11]
 gi|323442363|gb|EGA99992.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus O46]
 gi|344177358|emb|CCC87824.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           subsp. aureus LGA251]
          Length = 782

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|326791035|ref|YP_004308856.1| MutS2 protein [Clostridium lentocellum DSM 5427]
 gi|326541799|gb|ADZ83658.1| MutS2 protein [Clostridium lentocellum DSM 5427]
          Length = 797

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 221/711 (31%), Positives = 336/711 (47%), Gaps = 87/711 (12%)

Query: 17  LEESQKLLNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           LEE + L  +T+ A+ + ++   + L T++ +  IL     G +LS  E+ A+R  LR  
Sbjct: 40  LEEVKTLQKETAEAIHISIKQGKMPLGTLKAVKPILKHIDIGAILSAGELLAIRDVLRLT 99

Query: 76  ---NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
               N ++      E+       Y  +    +     T LE +I  CI     I  D+ +
Sbjct: 100 RQGKNYYQDAIATGEV-------YPSIGGYFEGLTPFTTLEREISRCI-----IAADQFA 147

Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKY 188
           +D     A  ++ M++L   +K+V   +  +      I  P++T R+ R C+ IK  +K 
Sbjct: 148 DDATPELAHIRKQMKSLGVKIKEVLQNMIHSSHYQDMIQDPVVTLRQDRYCIPIKIEYKS 207

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
               GI  + SS+GAT F+EP   VE  N    L   E  E   +L  LT +IA    EI
Sbjct: 208 QF-KGIVHDQSSTGATVFIEPMAVVELGNALKSLEVKEQEEIEKLLIELTNQIAPITEEI 266

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
               + +  +D  FAR+ F+   D   P L++Q ++    +      +HPLL   S+   
Sbjct: 267 GRNYELLTLLDSIFARSEFSLRYDCREPRLNNQGYIFLKKA------RHPLLAKESV--- 317

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                                           VPIDI V  +   ++ITGPNTGGKT ++
Sbjct: 318 --------------------------------VPIDIYVGKDFTTLLITGPNTGGKTVTL 345

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL SLM+  GL +PA     +  F+ I AD+GD QS+EQ+LSTFS H++ IV IL+ 
Sbjct: 346 KTIGLFSLMAAIGLQIPAAEGSEMAIFEGIYADLGDEQSIEQSLSTFSAHMTNIVSILKD 405

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
           +S  SLVL+DE+GSGTDP EG ALA +IL++LR +    V TTHY++L          EN
Sbjct: 406 MSLNSLVLLDEVGSGTDPVEGAALAMAILEHLRKQQIRTVATTHYSELKLYALSTDGVEN 465

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +E+LRPTYR+L G  G SNA  I+  +G    +I  A     ++  +++  +  
Sbjct: 466 ASCEFDVESLRPTYRLLIGVPGKSNAFAISMKLGLPEYLIDEA-----KVYLQKENVKME 520

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD--------LDRRAAHLKAKE 600
           ++   L + +R  E +   A +   E   L  EI++E K         L+R  A LKAKE
Sbjct: 521 DILVDLEQSKRLAEMERERAKAFRDEAEHLKEEIQNERKKLEKAKKKVLER--AELKAKE 578

Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDASA--DEINSLIKESESAIAAIVEAHRPDDDF 658
                  L  A+ + D V+++     R A A  DE  SL    +     +   H+     
Sbjct: 579 I------LKTAEAETDKVLKEVRAVARKAQATIDE-QSLYNAKKRMSDTVSAQHKRVGKV 631

Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
              +   +    + GE+V V SL  K   V         V V+ G M +R+
Sbjct: 632 VGRQEKVALKAVEVGEEVMVTSLMQK-GVVTAAADRSGNVEVRVGIMPMRI 681


>gi|386830679|ref|YP_006237333.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           subsp. aureus HO 5096 0412]
 gi|385196071|emb|CCG15689.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           subsp. aureus HO 5096 0412]
          Length = 782

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEECTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|417799021|ref|ZP_12446173.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21310]
 gi|334274913|gb|EGL93219.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21310]
          Length = 782

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|366166669|ref|ZP_09466424.1| MutS2 family protein [Acetivibrio cellulolyticus CD2]
          Length = 793

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 211/690 (30%), Positives = 337/690 (48%), Gaps = 68/690 (9%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  + DI   +  A  G +L+P E+  V   LRAV N    L   A  D       + + 
Sbjct: 65  LGGVNDIRDSIRRAEIGSILNPGELIRVSGLLRAVRN----LKNYASGDNIRTGEDNVVG 120

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENL-DSLLKKVAAQ 159
           EL+        +E+KI  CI  +  I  D AS  L  IR + +    ++ D L   V + 
Sbjct: 121 ELINCLEASKRVEDKINMCIVSEEEI-SDNASPALGNIRRQIRHAQNSIKDKLNDLVRSS 179

Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
            +Q   + + ++T R  R  V +K  ++  +P G+  + S+SGAT F+EP   VE NN  
Sbjct: 180 KYQKY-MQESIVTLRGDRYVVPVKQEYRSEIP-GLVHDSSASGATLFVEPMAVVEANNTI 237

Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
             L   E  E   IL  L+ ++++    +K  ++ + ++D  FA+A  +   + VCP L+
Sbjct: 238 RELKIKEQTEIERILQELSCDVSEISMGLKTNVELLAKLDFIFAKAKLSLDYNCVCPKLN 297

Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
            +              +HPLL               +P                      
Sbjct: 298 REGRTVIKKG------RHPLL---------------DP--------------------KI 316

Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
            VPID  +  E   +V+TGPNTGGKT ++KT+GL +LM++AGL +PA     +  F  + 
Sbjct: 317 VVPIDFWIGDEFDTLVVTGPNTGGKTVTLKTVGLFTLMTQAGLQIPANEGTEISVFGKVF 376

Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
           ADIGD QS+EQ+LSTFS H+  IV+ILE V   SLVL DE+G+GTDP+EG ALA +IL++
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMKNIVNILENVDSSSLVLFDELGAGTDPTEGAALAMAILEH 436

Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
           L++R    V TTHY+ L          ENA  EF +ETL+PTY++L G  G SNA  I+ 
Sbjct: 437 LKERGCTIVATTHYSQLKVYAVTTPHVENACCEFDVETLKPTYKLLIGVPGRSNAFAISN 496

Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
            +G    I++RA+  +       ++ +  ++  S+ +   + ES+ R A  L  E   + 
Sbjct: 497 RLGLIDSIVERAKGYL-----TSEEIKFEDMLMSIEKNLNQSESEKRQAQVLKLEAEKIR 551

Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA----SADEIN 635
            EIE++ K  + R  ++  +  ++ ++ L  AK + + ++ +     R+     S  E  
Sbjct: 552 NEIEEQKKRFEDRKENIVKEAREEARRVLLDAKHEAENILSEMRRIQREKESSQSQKEAE 611

Query: 636 SLIKESESAIAAIVEA-HRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDKLATVVEV 691
            +  + ++ I  I EA  +P     +   NT    P+    G+ V + +L  K  TVV +
Sbjct: 612 DMRLKIKNKIDNIEEALSKP-----IIPRNTLVKPPKNLKPGDSVLIINLNQK-GTVVAL 665

Query: 692 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           P  +   +VQ G M++ +   N++ I   K
Sbjct: 666 PDKNGEAIVQAGIMKINLHITNLKVIDEQK 695


>gi|21282756|ref|NP_645844.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus MW2]
 gi|49485982|ref|YP_043203.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus MSSA476]
 gi|297208218|ref|ZP_06924648.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300912295|ref|ZP_07129738.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|418934045|ref|ZP_13487869.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC128]
 gi|418987965|ref|ZP_13535638.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1835]
 gi|448742615|ref|ZP_21724554.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus KT/314250]
 gi|38604916|sp|Q8NX56.1|MUTS2_STAAW RecName: Full=MutS2 protein
 gi|56749203|sp|Q6GA70.1|MUTS2_STAAS RecName: Full=MutS2 protein
 gi|21204194|dbj|BAB94892.1| MutS-like protein [Staphylococcus aureus subsp. aureus MW2]
 gi|49244425|emb|CAG42853.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|296886957|gb|EFH25860.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300886541|gb|EFK81743.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|377719753|gb|EHT43923.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1835]
 gi|377771825|gb|EHT95579.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC128]
 gi|445546653|gb|ELY14940.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus KT/314250]
          Length = 782

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L  +I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSVKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|312135400|ref|YP_004002738.1| muts2 family protein [Caldicellulosiruptor owensensis OL]
 gi|311775451|gb|ADQ04938.1| MutS2 family protein [Caldicellulosiruptor owensensis OL]
          Length = 786

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 213/684 (31%), Positives = 347/684 (50%), Gaps = 82/684 (11%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEA-AELDGDSLQRYSPLLELLK 104
           DI+ IL  A +  +L+P EI  V R L+    V   L  A       S +R   L EL  
Sbjct: 70  DISLILKKAKAQAILTPHEILEVARILKLSQEVKSYLANAVGSCLKSSRERLFNLKELTA 129

Query: 105 NCN--FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVA 157
             +  FLT  E             ILD AS  L+ IR +R R +E      L+ +++   
Sbjct: 130 RIDQTFLTPEE-------------ILDTASPRLKEIR-DRIRRLETRIRDELNRMIRDPK 175

Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
            Q F    + +P+IT R  ++ + +KA HK  +  GI  + S++GAT F+EP   VE +N
Sbjct: 176 IQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGATLFVEPFVCVEISN 230

Query: 218 MEVRLSNSEIAEETAI-LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
            ++R++ SE  EE    L  L+  I+ S  EIK   + + E+D+ F +A +A       P
Sbjct: 231 -QIRVARSEEKEEIEKILQELSQLISDSYNEIKQNFESLSELDILFTKAQWAHQFRASKP 289

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
           IL++  +      IN++  +HPL+    +                               
Sbjct: 290 ILNTAGY------INLKKARHPLIEKEKV------------------------------- 312

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
               VPID+ +  E  V+VITGPNTGGKT ++KT+GL  L++++G++LPA     +  F 
Sbjct: 313 ----VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGMFLPADEGSEVCVFS 368

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            I ADIGD QS+ Q+LSTFS H+  I++I +     +LVL+DEIGSGTDP EG ALA +I
Sbjct: 369 KIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADNSTLVLLDEIGSGTDPEEGAALAKAI 428

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L++L ++    V TTHY +L     ++ RFENA+ EF + TL+PTYR+L G  G SNAL 
Sbjct: 429 LKFLHNKGAKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSNALY 488

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I+ ++G +++I++ A+  + +   E      +++   +  +R++LE    +A  L  E  
Sbjct: 489 ISSNLGLNKEIVELAKSYMSKKMLEL-----TDIINEMERKRKELEEVLESANKLKIETE 543

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 636
           +L + +E+E +  +     +K + +++ ++   F +   D V + F+   + A + +   
Sbjct: 544 NLKKTLEEERRRFEAEKQRIKERASKEARE---FVQRVEDEVEKLFKELRKIAESLKEKE 600

Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPG 693
           ++K+ E          +  +  S  E    S  P+    G++V+VKS  D    V  +P 
Sbjct: 601 MLKQLEEKKREYENLVKSIEQASQKEEKLQSKLPENLRLGQKVYVKSF-DAEGFVESLPD 659

Query: 694 DDDTVLVQYGKMRVRVKKNNIRPI 717
               + V+ G M++ V  ++I  I
Sbjct: 660 SKGNLTVRIGIMKLSVNISDIFEI 683


>gi|418953440|ref|ZP_13505433.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-189]
 gi|375375040|gb|EHS78649.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-189]
          Length = 717

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 206/708 (29%), Positives = 356/708 (50%), Gaps = 97/708 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
           K   V+E+  D++ + VQ G +++++      PI + ++K     + R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKKKLSQR 692


>gi|333896863|ref|YP_004470737.1| MutS2 protein [Thermoanaerobacterium xylanolyticum LX-11]
 gi|333112128|gb|AEF17065.1| MutS2 protein [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 786

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 183/553 (33%), Positives = 287/553 (51%), Gaps = 62/553 (11%)

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           P+IT R  R  V +K  ++     G+  + SSSGAT F+EP   VE NN   +L   E  
Sbjct: 184 PIITIRNGRYVVPVKQEYRGTFK-GLIHDQSSSGATLFIEPMAVVELNNDLRQLEIKEQH 242

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ LT ++ K   EI   M  + E+D+ FA+A ++   D   PIL+++ +V    
Sbjct: 243 EVERILAELTEDVGKHVDEINENMVVLKELDVIFAKAKYSISTDSTKPILNTKGYV---- 298

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
             N++  +HPL+                                SK   D  VPI I + 
Sbjct: 299 --NLKNARHPLI--------------------------------SK---DAVVPISIHLG 321

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
                +VITGPNTGGKT ++KT+GL +LMS +GL +PA     + +FD I  DIGD QS+
Sbjct: 322 ESFNTLVITGPNTGGKTVTLKTVGLLTLMSMSGLNIPADEGSDVAFFDNIFVDIGDEQSI 381

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQ+LSTFS H++ IV IL  V+  SLVL+DE+G+GTDP+EG ALA SIL +L       +
Sbjct: 382 EQSLSTFSAHMTNIVKILNNVTSNSLVLLDELGAGTDPTEGAALAMSILDFLHRMNCRTI 441

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L     K+   ENA+ EF +ETL+PTYR+  G  G SNA  I+K +G +  +I
Sbjct: 442 ATTHYSELKQYALKNEGVENASVEFDVETLKPTYRLTIGIPGKSNAFEISKRLGLNDDVI 501

Query: 529 QRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
             A+  +  E L+ E       ++ + L  +R + E+      +L  ++  L +E E + 
Sbjct: 502 DNAKSYITSEELKFE-------DILKDLENKRIEAENAKEEIEALKNQVESLRQEYEKKI 554

Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAI 645
           KD +R    +  K  ++ ++ L   K   D ++     +L++A  +D+ N LI+E+   +
Sbjct: 555 KDTEREREKIIEKAREKAKKILENTKATADEIIA----KLKEAEKSDKKNKLIEEARLKL 610

Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
              +  +  ++    SE       P+    G+ +++  L D+    +  P  D  V +Q 
Sbjct: 611 KENI--NEMEESLKKSEIPEYKKVPKDVMPGQTLYIVPL-DQTGIALSEPDKDGNVKIQA 667

Query: 703 GKMRVRVKKNNIR 715
           G +++ V  +N+R
Sbjct: 668 GILKMNVHISNLR 680


>gi|418951998|ref|ZP_13504057.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-160]
 gi|375370325|gb|EHS74140.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-160]
          Length = 782

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDCLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|418873293|ref|ZP_13427600.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-125]
 gi|375366347|gb|EHS70347.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-125]
          Length = 717

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 206/708 (29%), Positives = 356/708 (50%), Gaps = 97/708 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
           K   V+E+  D++ + VQ G +++++      PI + ++K     + R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKKKLSQR 692


>gi|417891970|ref|ZP_12536027.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21200]
 gi|341851256|gb|EGS92185.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21200]
          Length = 782

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 205/709 (28%), Positives = 356/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  ++ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--LIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGTALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|418324592|ref|ZP_12935826.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus pettenkoferi VCU012]
 gi|365225279|gb|EHM66524.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus pettenkoferi VCU012]
          Length = 783

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 205/678 (30%), Positives = 330/678 (48%), Gaps = 78/678 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  I  ++  A  G +L+ +E+  ++R ++ V N +K        D + +  Y  L 
Sbjct: 65  LSGLAQIKPLIRRAQIGGVLNVTELNTIKRLIQ-VQNQFKTFYAQLLEDDEEVVHYPILH 123

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           E +     LT+L   I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 124 ERMNELPVLTDLYRTIHDKCDAHDL--YDHASTTLQSIRSKISSTSQRIRQNLDRIVKSQ 181

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           + Q      +   ++T R  R  + +KA ++    +GI  + SSSG T ++EP   VE N
Sbjct: 182 SNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSSSGQTLYIEPSSVVEMN 236

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LTAE+A ++ +   + ++++ +ID   A+A +A+ +    
Sbjct: 237 NQISRLRNDEAVERERILTELTAEVA-ADADGCLIAEQIMGQIDFLTAKARYARKIKATK 295

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P  +       D S+ +    HPLL            +N+     DVE            
Sbjct: 296 PEFTE------DRSVYLPKAFHPLL------DQETVVANTIEFAEDVE------------ 331

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M++AGL +P  +  +L  F
Sbjct: 332 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQAGLLIPTLDGSKLGIF 374

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV ILE  ++ SL+L DE+G+GTDPSEG ALA S
Sbjct: 375 ENVYCDIGDEQSIEQSLSTFSSHMKNIVSILEEATQNSLILFDELGAGTDPSEGAALAMS 434

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+ D   L + TTHY +L           NA+ EF + TL PTY++L G  G SNA 
Sbjct: 435 ILDYVHDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 494

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
           +I+K +G   KII +A+ ++        +   + + +SL +  ++++ Q      L  E 
Sbjct: 495 DISKKLGLGMKIISKAKTMI-----GHDEQEINNMIESLEKNSKRVDEQRIELDRLLREA 549

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
            D + ++E   K       HL  +   +  Q +  A  + D +++D  +      AD   
Sbjct: 550 QDTHDDLEQHYKKFKNYEQHLMNEARDKANQRVKAATKEADQILKDLRHMRDKKGAD--- 606

Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ------FGEQVHVKSLGDKLATVV 689
             +KE E     +++  +  +D    ++       Q       G++V V + G K   V+
Sbjct: 607 --VKEHE-----LIDKKKHLEDQYEEKSLKKDVKKQKWDEIHAGDEVKVLTYGQK-GEVL 658

Query: 690 EVPGDDDTVLVQYGKMRV 707
           E+ GDD+ V VQ G +++
Sbjct: 659 ELVGDDEAV-VQMGIIKM 675


>gi|238917772|ref|YP_002931289.1| DNA mismatch repair protein MutS2 [Eubacterium eligens ATCC 27750]
 gi|259511156|sp|C4Z417.1|MUTS2_EUBE2 RecName: Full=MutS2 protein
 gi|238873132|gb|ACR72842.1| DNA mismatch repair protein MutS2 [Eubacterium eligens ATCC 27750]
          Length = 787

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 217/713 (30%), Positives = 343/713 (48%), Gaps = 80/713 (11%)

Query: 24  LNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ AL+ + Q   +D S  +DI   +     G  L+ SE+      + A+ +  K +
Sbjct: 47  LNETNDALSRIFQKGTVDFSQTKDIRASVARLKVGSSLNISELL----NISAILSCAKHV 102

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
            +  E   DS+        +L+N   +  L  +I  CI  +  I  D AS +L  IR  +
Sbjct: 103 KDYYEHREDSISG------MLENLATVDALNSQIKKCIISEDEI-SDDASSNLRSIRRSK 155

Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
               + + S L K+         +   +IT R+ R C+ +KA +K   P G+  + SS+G
Sbjct: 156 SIANDRIHSELNKLLNSPTYRTYLQDYVITTRQGRYCLPVKAEYKSAFP-GMIHDQSSTG 214

Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
           +T F+EP   V+ NN    L   E AE   IL+ L+A+  +   E+    + ++E+D  F
Sbjct: 215 STLFIEPAAVVKLNNDIRELELKEAAEIEVILADLSAKAGEHTEELLCDYEILVELDCIF 274

Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
           A+A  A+ M    P++++         INI+  +HPL+   ++                 
Sbjct: 275 AKAQLARHMHASRPVMNTSG------IINIKKGRHPLIESHTV----------------- 311

Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
                             VPIDI +  + ++++ITGPNTGGKT S+KT+GL +LM+++GL
Sbjct: 312 ------------------VPIDIYLGTDFKLLIITGPNTGGKTVSLKTVGLLTLMAQSGL 353

Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
           ++PA +H  +  F  I ADIGD QS+EQ+LSTFS H++  V IL+      LVL DEIG+
Sbjct: 354 FIPALDHSDIAVFKNIYADIGDEQSIEQSLSTFSSHMTNTVKILKEADENCLVLFDEIGA 413

Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
           GTDP+EG ALA +IL  L+ R    + TTHY+++          ENA+ EF +E+LRPTY
Sbjct: 414 GTDPTEGAALAIAILNDLKMRGVTTMATTHYSEIKLYALSTEGVENASCEFDVESLRPTY 473

Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 562
           R+L G  G SNA  I+K +G    I+  A    ERL  E       ++   L   R  LE
Sbjct: 474 RLLIGIPGKSNAFAISKKLGLPDYILSDAS---ERLNAEDVHFE--DIVSDLEHARISLE 528

Query: 563 SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
            +     S  AEI  L  +++ + + LD R  ++  K  +Q    L  AK   D  ++  
Sbjct: 529 KEQAEVESYKAEIASLKEKLQAKNERLDERTDNIIRKANEQAAAILKDAKDFADETIKAM 588

Query: 623 ENQ-LRDASADEINSLIKESES-------AIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
               +  A  ++  + ++E  +          A V+AH+  D   +SE         F  
Sbjct: 589 NKHGMTVAELEKHRTAVREKMNKNQAKLKVEPAKVKAHKAHD---ISE---------FKT 636

Query: 675 QVHVKSLGDKLA-TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
            +HVK L   ++ TV  +      V VQ G +  ++   N+  + + K    A
Sbjct: 637 GMHVKVLTMNVSGTVSAIHPAKKQVTVQVGALSTKIDIKNLEILSDYKEPKEA 689


>gi|417899642|ref|ZP_12543544.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21259]
 gi|341844570|gb|EGS85782.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21259]
          Length = 688

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 206/700 (29%), Positives = 353/700 (50%), Gaps = 94/700 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           K   V+E+  D++ + VQ G +++++    I  +  +KRK
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLP---IEDLEKNKRK 687


>gi|365158083|ref|ZP_09354324.1| MutS2 family protein [Bacillus smithii 7_3_47FAA]
 gi|363621912|gb|EHL73094.1| MutS2 family protein [Bacillus smithii 7_3_47FAA]
          Length = 784

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 221/736 (30%), Positives = 363/736 (49%), Gaps = 114/736 (15%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           Q+  ++ +  L +    PLD   + +I   +  A  G LL+  E+  +  T+ +   + K
Sbjct: 47  QEETDEAATVLRVAGHAPLD--GLHNIRPHVKRAKIGGLLNGEELIQIAGTIYSGRMMKK 104

Query: 81  KLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
            + E  E +G+ L    P+L E  +    LTELE  I   +D    I LD AS  L  +R
Sbjct: 105 FIAELVE-NGEKL----PILSEQTEQIPVLTELEHDIKRAVDENGEI-LDSASSTLREVR 158

Query: 140 AERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
           ++ +    R  E L+S+++   AQ   +  I    +T R  R  + +K  +++    GI 
Sbjct: 159 SQIRIHEGRIRERLESMIRSKNAQKMLSDAI----VTIRNDRYVIPVKQEYRHHY-GGIV 213

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
            + SSSG T F+EP+  V+ NN   +L   E  E   IL  L+A++ ++  E+  ++  +
Sbjct: 214 HDQSSSGQTLFIEPESIVQLNNQLKQLKLKEQEEIEKILRELSAKVQENADELLVIVQVM 273

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            ++D  FA+A  A+ M    P+++ + +      I I   +HPLL               
Sbjct: 274 GDLDFIFAKAKLAKSMKASKPLMNREGY------IRIHQARHPLL--------------- 312

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
            P++                     VP DI++  +   +VITGPNTGGKT ++KT+GL +
Sbjct: 313 -PIEE-------------------AVPNDIELGKDYTAIVITGPNTGGKTVTLKTIGLLT 352

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM+++GL +PA+    +  F  + ADIGD QS+EQ+LSTFS H+  IVDIL+ V+ ESLV
Sbjct: 353 LMAQSGLQIPAQEGSEMAVFHSVFADIGDEQSIEQSLSTFSSHMVNIVDILKEVTGESLV 412

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DE+G+GTDP EG ALA SIL  + +     V TTHY +L           NA+ EF++
Sbjct: 413 LFDELGAGTDPQEGAALAISILDEVLEVGARVVATTHYPELKAYGYNRDGVINASVEFNV 472

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LVERLRPERQQ 544
           ETL PTYR+L G  G SNA  I++ +G + KII+RA++           ++  L   R+ 
Sbjct: 473 ETLSPTYRLLIGVPGRSNAFEISERLGLNHKIIERARQYTGADTNEVENMIASLERSRKL 532

Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL-KAKETQQ 603
             K E      E R  L+S  +    L  ++ + Y + E+     +R A+ + +  + + 
Sbjct: 533 AEKEE-----QEARDYLKSAEKLLKDLQNQMQEFYEKKEEMYSRAEREASKIVEKAKEEA 587

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR------PDDD 657
            +   +  K+++                 E N+ +KE E     ++EA +      P+ D
Sbjct: 588 EEIIRHLRKLRL-----------------EKNAEVKEHE-----LIEARKRLSDAMPEID 625

Query: 658 FSVSE---TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
               +     + SF P  G++V V S G K   + +V G++   LVQ G +++ V ++++
Sbjct: 626 KKTPQPKAKRSRSFMP--GDEVKVLSFGQKGTILEKVDGNE--WLVQVGILKMNVNESDL 681

Query: 715 RPIPNSKRKNAANPAP 730
             IP+ K+    +P P
Sbjct: 682 EYIPSQKK---VDPKP 694


>gi|148267636|ref|YP_001246579.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus JH9]
 gi|150393691|ref|YP_001316366.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus JH1]
 gi|229486378|sp|A6U0W1.1|MUTS2_STAA2 RecName: Full=MutS2 protein
 gi|229486379|sp|A5IS30.1|MUTS2_STAA9 RecName: Full=MutS2 protein
 gi|147740705|gb|ABQ49003.1| MutS2 family protein [Staphylococcus aureus subsp. aureus JH9]
 gi|149946143|gb|ABR52079.1| MutS2 family protein [Staphylococcus aureus subsp. aureus JH1]
          Length = 782

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 354/709 (49%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L  +I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVTEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|418280914|ref|ZP_12893736.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21178]
 gi|365167015|gb|EHM58492.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21178]
          Length = 782

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 356/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PISKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|253317073|ref|ZP_04840286.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus str. CF-Marseille]
 gi|257795126|ref|ZP_05644105.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A9781]
 gi|258407166|ref|ZP_05680315.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A9763]
 gi|258421743|ref|ZP_05684664.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A9719]
 gi|258432913|ref|ZP_05688602.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A9299]
 gi|258443403|ref|ZP_05691746.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A8115]
 gi|258446076|ref|ZP_05694238.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A6300]
 gi|258449811|ref|ZP_05697909.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus A6224]
 gi|258454910|ref|ZP_05702873.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A5937]
 gi|269202756|ref|YP_003282025.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus ED98]
 gi|282894171|ref|ZP_06302402.1| MutS2 protein [Staphylococcus aureus A8117]
 gi|282928666|ref|ZP_06336263.1| MutS2 protein [Staphylococcus aureus A10102]
 gi|295405948|ref|ZP_06815757.1| MutS2 protein [Staphylococcus aureus A8819]
 gi|296275631|ref|ZP_06858138.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus MR1]
 gi|297246508|ref|ZP_06930346.1| MutS2 protein [Staphylococcus aureus A8796]
 gi|384864370|ref|YP_005749729.1| mutS2 protein [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|387150285|ref|YP_005741849.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
           04-02981]
 gi|415694454|ref|ZP_11455905.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus CGS03]
 gi|417652169|ref|ZP_12301922.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21172]
 gi|417801420|ref|ZP_12448510.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21318]
 gi|417894614|ref|ZP_12538628.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21201]
 gi|418424284|ref|ZP_12997408.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS1]
 gi|418427274|ref|ZP_13000288.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS2]
 gi|418430119|ref|ZP_13003036.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS3a]
 gi|418433078|ref|ZP_13005860.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS4]
 gi|418436753|ref|ZP_13008557.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS5]
 gi|418439625|ref|ZP_13011334.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS6]
 gi|418442676|ref|ZP_13014279.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS7]
 gi|418445736|ref|ZP_13017214.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS8]
 gi|418448680|ref|ZP_13020074.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS9]
 gi|418451504|ref|ZP_13022839.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS10]
 gi|418454561|ref|ZP_13025824.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11a]
 gi|418457435|ref|ZP_13028640.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11b]
 gi|418568086|ref|ZP_13132440.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21272]
 gi|418638918|ref|ZP_13201191.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-3]
 gi|418653778|ref|ZP_13215707.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-99]
 gi|418663441|ref|ZP_13224959.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-122]
 gi|418877992|ref|ZP_13432227.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1165]
 gi|418880818|ref|ZP_13435037.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1213]
 gi|418883745|ref|ZP_13437942.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1769]
 gi|418886403|ref|ZP_13440552.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1150]
 gi|418894761|ref|ZP_13448858.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1057]
 gi|418914239|ref|ZP_13468211.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC340D]
 gi|418920218|ref|ZP_13474151.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC348]
 gi|418931206|ref|ZP_13485048.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1750]
 gi|418991004|ref|ZP_13538665.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1096]
 gi|419785786|ref|ZP_14311533.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-M]
 gi|424777696|ref|ZP_18204655.1| MutS2 family protein [Staphylococcus aureus subsp. aureus CM05]
 gi|443635753|ref|ZP_21119875.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21236]
 gi|257789098|gb|EEV27438.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A9781]
 gi|257841321|gb|EEV65766.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A9763]
 gi|257842076|gb|EEV66504.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A9719]
 gi|257849353|gb|EEV73330.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A9299]
 gi|257851493|gb|EEV75432.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A8115]
 gi|257855134|gb|EEV78075.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A6300]
 gi|257856731|gb|EEV79634.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus A6224]
 gi|257862790|gb|EEV85555.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A5937]
 gi|262075046|gb|ACY11019.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus ED98]
 gi|282589705|gb|EFB94791.1| MutS2 protein [Staphylococcus aureus A10102]
 gi|282763657|gb|EFC03786.1| MutS2 protein [Staphylococcus aureus A8117]
 gi|285816824|gb|ADC37311.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
           04-02981]
 gi|294969383|gb|EFG45403.1| MutS2 protein [Staphylococcus aureus A8819]
 gi|297176614|gb|EFH35877.1| MutS2 protein [Staphylococcus aureus A8796]
 gi|312829537|emb|CBX34379.1| mutS2 protein [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315128541|gb|EFT84546.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus CGS03]
 gi|329725189|gb|EGG61678.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21172]
 gi|334276778|gb|EGL95028.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21318]
 gi|341851798|gb|EGS92707.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21201]
 gi|371980768|gb|EHO97969.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21272]
 gi|375017989|gb|EHS11584.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-99]
 gi|375019967|gb|EHS13510.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-3]
 gi|375034089|gb|EHS27264.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-122]
 gi|377694114|gb|EHT18479.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1165]
 gi|377695625|gb|EHT19985.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1057]
 gi|377715039|gb|EHT39236.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1750]
 gi|377715479|gb|EHT39669.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1769]
 gi|377723126|gb|EHT47251.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1096]
 gi|377726585|gb|EHT50696.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1150]
 gi|377731711|gb|EHT55764.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1213]
 gi|377757741|gb|EHT81629.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC340D]
 gi|377765577|gb|EHT89426.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC348]
 gi|383361993|gb|EID39352.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-M]
 gi|387719184|gb|EIK07136.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS3a]
 gi|387719344|gb|EIK07293.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS2]
 gi|387720694|gb|EIK08597.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS1]
 gi|387725944|gb|EIK13535.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS4]
 gi|387728283|gb|EIK15776.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS5]
 gi|387730846|gb|EIK18199.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS6]
 gi|387736228|gb|EIK23329.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS8]
 gi|387737623|gb|EIK24685.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS7]
 gi|387738356|gb|EIK25400.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS9]
 gi|387745329|gb|EIK32088.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS10]
 gi|387746022|gb|EIK32767.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11a]
 gi|387747993|gb|EIK34692.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11b]
 gi|402346376|gb|EJU81466.1| MutS2 family protein [Staphylococcus aureus subsp. aureus CM05]
 gi|408423364|emb|CCJ10775.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
 gi|408425354|emb|CCJ12741.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
 gi|408427342|emb|CCJ14705.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
 gi|408429329|emb|CCJ26494.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
 gi|408431317|emb|CCJ18632.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
 gi|408433311|emb|CCJ20596.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
 gi|408435302|emb|CCJ22562.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
 gi|408437287|emb|CCJ24530.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
 gi|443408812|gb|ELS67323.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21236]
          Length = 782

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 354/709 (49%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L  +I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|82750751|ref|YP_416492.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus RF122]
 gi|123549011|sp|Q2YXD1.1|MUTS2_STAAB RecName: Full=MutS2 protein
 gi|82656282|emb|CAI80696.1| DNA mismatch repair protein [Staphylococcus aureus RF122]
          Length = 782

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 354/709 (49%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + + V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEHVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSCNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|167747774|ref|ZP_02419901.1| hypothetical protein ANACAC_02495 [Anaerostipes caccae DSM 14662]
 gi|167653136|gb|EDR97265.1| MutS2 family protein [Anaerostipes caccae DSM 14662]
          Length = 799

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 220/725 (30%), Positives = 338/725 (46%), Gaps = 90/725 (12%)

Query: 26  QTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
           QT  AL  +  Q  +    + D+   L        LS  E+  +   L AV N      +
Sbjct: 49  QTQDALTRLYKQGSISFFGVHDLGASLKRLKMKGTLSAGELLEIAGLLEAVKNALAYGAQ 108

Query: 85  AAEL-DGDSL----QRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
             ++ D DSL    +   P+  LLK+        E+I            D AS  L+ IR
Sbjct: 109 RDDMADADSLDSVFESLVPMDGLLKDIRHCIISPEEIS-----------DDASSALKDIR 157

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
              K   + + S L  + +       +   L+T R  R C+ +K  ++     G+  + S
Sbjct: 158 RNMKLTNQKIHSQLTAMVSSSSNKDMLQDALVTMRNGRYCIPVKQEYRGQFK-GMIHDQS 216

Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
           SSG+T F+EP   V  NN    L   E  E   ILSLL+ + +     +      ++ +D
Sbjct: 217 SSGSTLFIEPMAVVTLNNQLKELEGQEQTEIERILSLLSEQASYDMDGLAQNQKLLVLLD 276

Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
             FA+A +A+  +G  PI         D  INI+  +HPLL               +P K
Sbjct: 277 FIFAKAKYAKDYNGSKPIFRE------DGVINIKQGRHPLL---------------DPKK 315

Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
                                VPI++ +     ++VITGPNTGGKT S+KT+GL +LM +
Sbjct: 316 --------------------VVPINVSLGDAFSMLVITGPNTGGKTVSLKTVGLFTLMGQ 355

Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
           AGL++PA     L  ++ + ADIGD QS+EQNLSTFS H++ IV I++   R SLVL+DE
Sbjct: 356 AGLHIPAFQGSSLGIYEEVFADIGDEQSIEQNLSTFSSHMTNIVSIIQNAHRHSLVLLDE 415

Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
           +  GTDP EG ALA SIL  L DR    + TTHY++L          ENA+ EF +ETL 
Sbjct: 416 LCGGTDPVEGAALAISILTDLHDRGVKTMATTHYSELKMFALSTDGVENASCEFDVETLS 475

Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 559
           PTYR++ G  G SNA  I++ +G D  II  A   ++    +         +++++ +  
Sbjct: 476 PTYRLMIGIPGKSNAFAISRKLGLDNHIIVHASDQIDESVKD---------FETILAD-- 524

Query: 560 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE-------LNFAK 612
            LE   +T      EI +  +EIE+  K L  R  ++K K  + +++        ++ AK
Sbjct: 525 -LEKSKQTIEQEQEEIFEYRKEIENLRKSLKERQENIKEKREKLLREAREEAYRIISEAK 583

Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS--FTP 670
              D  ++++ N L+  S  + N  ++   S +    +  R + D +    N +S    P
Sbjct: 584 ETADETIKEY-NNLKKQSGKDANRKMEHMRSDLRG--KMSRLEKDMAYRSKNRASKKHEP 640

Query: 671 ---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI---RPIPNSKRKN 724
              Q G++V+V SL     TV  +P     + VQ G MR +V   ++   + +   KR+N
Sbjct: 641 GDFQVGDEVYVTSLSLS-GTVQTLPNSKGDLYVQMGMMRSKVNVKDLEITKSVKQVKREN 699

Query: 725 AANPA 729
           A N A
Sbjct: 700 ARNEA 704


>gi|258423813|ref|ZP_05686699.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A9635]
 gi|418888936|ref|ZP_13443072.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1524]
 gi|257846045|gb|EEV70073.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus A9635]
 gi|377754446|gb|EHT78355.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1524]
          Length = 782

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 205/709 (28%), Positives = 356/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  ++ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--LIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|373107351|ref|ZP_09521650.1| MutS2 family protein [Stomatobaculum longum]
 gi|371651181|gb|EHO16615.1| MutS2 family protein [Stomatobaculum longum]
          Length = 788

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 221/721 (30%), Positives = 354/721 (49%), Gaps = 82/721 (11%)

Query: 3   HAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLS 61
           HA+V    +P      E ++   +T AAL+ ++ +  L LS + D++  +     G  LS
Sbjct: 32  HALVPMTDLP------EIERAQAETEAALSRIRMKGELRLSGLRDVSASVKRLDVGGTLS 85

Query: 62  PSEICAVRRTL----RAVNNVWKKLTEAAELDGDSLQ-RYSPLLELLKNCNFLTELEEKI 116
            SE+ A+   L    RA N       E AE D D+L+  ++ L  L K        + ++
Sbjct: 86  TSELYAISTLLDLSERARNYGAH---EEAEPDPDALEASFTALSPLPKE-------KREL 135

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
             CI  + L+  D AS +L  IR + K   E + S L++   +      +   ++T R  
Sbjct: 136 KHCILSEELVA-DTASAELSRIRRQMKTADERMHSALQEEINR--HKSYLMDTIVTMRNG 192

Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
             C+ +K+ +K  LP G+  + SS+G+T F+EP  AV  NN    L  +E  E T IL+ 
Sbjct: 193 SYCLAVKSEYKSKLP-GVVHDQSSTGSTVFIEPLVAVRLNNEYRELVIAEQQEITKILAA 251

Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
           L+A +      +      +  +D  FA+A  A  M    P+ +++  V       I+  +
Sbjct: 252 LSALLTPCTAALLANQKILAALDFVFAKARLASSMQASKPLFNTERIV------EIKDGR 305

Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
           HPL+                P                    D  VPI I++  +  +++I
Sbjct: 306 HPLI----------------P-------------------RDKVVPISIRIGEDFTLLII 330

Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
           TGPNTGGKT S+KT+GL +LM +AGL++PA    RL  F  + ADIGD QS+EQ+LSTFS
Sbjct: 331 TGPNTGGKTVSLKTMGLFTLMGQAGLHIPAFQGSRLAVFRDVFADIGDEQSIEQSLSTFS 390

Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
           GH+  +V+IL     ++L L DE+G+GTDP+EG ALA +IL +L++     V TTHY++L
Sbjct: 391 GHMKNVVEILASADSDALCLFDELGAGTDPTEGAALAIAILSFLQNIGARTVATTHYSEL 450

Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
                     ENA+ EF + TLRPTYR+L G  G SNA  I+K +G    II+ A+  + 
Sbjct: 451 KVYALSTKGVENASCEFDVATLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIEEAKTHI- 509

Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
               E+      +L   L  +RR +E++ +   +   EI +L    E   ++LD R   +
Sbjct: 510 ----EQNDAAFEDLLTRLEADRRTIEAERKEILAYRTEIEELKTRHEKADQNLDERKERI 565

Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
             K   + ++ L  AK   D  ++   N+L   SAD  + L++E E     + E  +  +
Sbjct: 566 LEKARAEAERILAEAKESADQSIRRI-NRL---SAD--SGLLRELEKERTGLRERLKAVE 619

Query: 657 DFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
             +  +    +  P     G+ V V S+ D  A V  +P  ++ + V+ G +R +V  ++
Sbjct: 620 KTAPKKEAVKAAKPAVLHIGDSVRVLSM-DHDAIVSTLPDKNNRLFVRMGVLRTQVSADD 678

Query: 714 I 714
           +
Sbjct: 679 V 679


>gi|418655590|ref|ZP_13217441.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-105]
 gi|375036341|gb|EHS29416.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-105]
          Length = 782

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKYSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|374604257|ref|ZP_09677223.1| MutS2 family protein [Paenibacillus dendritiformis C454]
 gi|374390142|gb|EHQ61498.1| MutS2 family protein [Paenibacillus dendritiformis C454]
          Length = 785

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 225/712 (31%), Positives = 362/712 (50%), Gaps = 109/712 (15%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L+ ++DI G L  A    +LS +E+  +   L A     + +    E      +   PLL
Sbjct: 65  LAGVKDIRGALKRARIQAMLSSTELWDISALLFAARRTKRHIAAVHE------EEAIPLL 118

Query: 101 E-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
           + L +  +   +LEE I  CID +  I LD+AS +L  IR E +    R  E L+++++ 
Sbjct: 119 QDLAETISDQKQLEEDIRQCIDEQGEI-LDQASFELAAIRRELRIGETRIREKLEAMIRS 177

Query: 156 V-AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
             AA++ Q     + LIT R  R  + +K  ++     GI  + S SGAT F+EP+  V 
Sbjct: 178 SNAAKMLQ-----EQLITIRNDRYVIPVKQEYRSHY-GGIVHDQSGSGATLFIEPEAIVA 231

Query: 215 FNNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 271
            NN   +L  +++ EE  I   LS LT ++      ++Y    V  +D  FA+A  A+ M
Sbjct: 232 MNN---KLRETKLREEREIERILSRLTEQVGLLADVLEYDTGAVETLDFMFAKARLAREM 288

Query: 272 DGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 331
               P ++ +  +    +      +HPL+                P              
Sbjct: 289 KASLPRMNDRGFLKLRKA------RHPLI----------------P-------------- 312

Query: 332 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 391
                +D  VPID+++      +++TGPNTGGKT ++KT+GL +LM+ +GL++PA++  +
Sbjct: 313 -----ADQVVPIDVELGNSYTSILVTGPNTGGKTVTLKTIGLLNLMAMSGLFIPAEDGSQ 367

Query: 392 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVA 451
           +  FD I ADIGD QS+EQ+LSTFS H++ I+ ILE ++ +SLVL+DE+G+GTDP+EG A
Sbjct: 368 MCVFDAIYADIGDEQSIEQSLSTFSSHLTNIIRILEQMTPKSLVLLDEVGAGTDPAEGSA 427

Query: 452 LATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
           LA +IL+++  R+G  +V TTHY++L     +     NA+ EF ++TLRPTYR+L G  G
Sbjct: 428 LAIAILEHIH-RLGCRMVATTHYSELKAYAYERKGVINASMEFDVQTLRPTYRLLVGVPG 486

Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
            SNA  IA+ +G  + II  A+  V       +  R   +  SL + R K E++  TA+ 
Sbjct: 487 RSNAFAIAERLGLPKPIIDHARGEV-----TEEDMRVETMIASLEDNRLKAEAERETASK 541

Query: 571 LHAEI----MDLYREIEDEAKDLDRRAAHLKAK----------ETQQVQQELNFAKVQID 616
           L  E+      L RE+E +  + ++R    +AK          E Q++  EL    ++  
Sbjct: 542 LRMELEAMRQKLSRELEKQEAEREKRQEQAEAKARAIVDKARREAQEIIAELRQLAME-- 599

Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQV 676
             VQ  E+ L +A         +  E+A  A + A    D   V            G+ V
Sbjct: 600 -GVQVKEHMLTEARK-------RLDEAAPEAKLAAKPKRDAKPVRRIEA-------GDDV 644

Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
            V SL  K  +VVE+ G++   +VQ G M+++V  +++  + ++  K+AA P
Sbjct: 645 RVYSLNQK-GSVVELAGEE--AVVQLGIMKMKVPLDDLELLSSA--KSAAKP 691


>gi|327475225|gb|AEA77207.1| MutS2 [Bacillus aquimaris]
          Length = 786

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 227/733 (30%), Positives = 352/733 (48%), Gaps = 67/733 (9%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQL 59
           +GHA V  + +P     EE   L  +T  A+ +++ +    L  I DI   +  A  G +
Sbjct: 26  LGHARVS-SLLP-SVEYEEIVHLHEETDEAMTILRLKGHAPLGGIFDIRPHVKRAQIGGM 83

Query: 60  LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
           L+PSE+  V  T+RA     +KLT+  E   +       L   +     L  LE+ I   
Sbjct: 84  LAPSELVQVASTIRA----SRKLTKFVEELLEEEVEIPLLENKMNTVIPLPYLEQNIRKV 139

Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
           +D    I LD ASE L  IR + + N   +   L+K+         +   +IT R  R  
Sbjct: 140 VDDNGEI-LDSASETLRSIRTQLRSNESRIREKLEKMTRSSNAQKMLSDAIITIRNDRYV 198

Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
           + +K  ++     GI  + SSSG T F+EP+  V  NN    L   E  E   IL  L+ 
Sbjct: 199 IPVKQEYRGHY-GGIIHDQSSSGQTLFIEPEAIVALNNQLRELRLKEQTEIEKILLALSV 257

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+ ++  E+  ++  + ++D  F +A F + + G  PI++++  +  + +      +HPL
Sbjct: 258 EVQEAAEELLLIVSILSDVDFMFTKAKFGRSIKGSKPIINNEGRIKLNKA------RHPL 311

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           L                P++  V N                   DI++  E   +VITGP
Sbjct: 312 L----------------PIEEAVAN-------------------DIELGKEFSSIVITGP 336

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL ++M++AGL +PA +   +  F  I ADIGD QS+EQ+LSTFS H+
Sbjct: 337 NTGGKTVTLKTLGLTNMMAQAGLPIPALDDSEVGIFRSIYADIGDEQSIEQSLSTFSSHM 396

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
             IV+ILE V  ESLVL DE+G+GTDP EG ALA SIL  +  +    V TTHY +L   
Sbjct: 397 VNIVEILEKVDHESLVLFDELGAGTDPQEGAALAISILDEVHGKGARVVATTHYPELKAY 456

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
                   NA+ EF +ETL PTY++L G  G SNA  I+K +G    +I RA+  +    
Sbjct: 457 GYNREGVVNASVEFDVETLSPTYKLLLGVPGRSNAFEISKRLGLSDSVILRAKSHIGTDT 516

Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
            E +      +  SL E RR+ E +   A  L  +   ++++++ +  +   +   L  K
Sbjct: 517 KEVEN-----MIASLEENRRQGEKELEEAHELLRQAEKMHKDMQKQMMEYYEKKDQLYEK 571

Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--SAIAAIVEAHRPDDD 657
              +    +  AK + D V++D     ++ SA      IKE E   A   + EA      
Sbjct: 572 AQLKASDLVEKAKEEADQVIKDLRRMQKEKSAQ-----IKEHELIHAKKQLEEATPKLKK 626

Query: 658 FSV--SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
            SV  S+ N      + G++V V S   K   + +V   +    VQ G M+++VK++++ 
Sbjct: 627 SSVQKSKGNNGKQVLKAGDEVKVLSFDQKGHLIEKVSSKEWQ--VQMGIMKMKVKESDLE 684

Query: 716 PIPNSKRKNAANP 728
            I  S++K    P
Sbjct: 685 FI-QSQQKVETKP 696


>gi|418643039|ref|ZP_13205225.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-24]
 gi|418649444|ref|ZP_13211472.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-91]
 gi|375016152|gb|EHS09796.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-24]
 gi|375029817|gb|EHS23142.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-91]
          Length = 717

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 202/686 (29%), Positives = 348/686 (50%), Gaps = 91/686 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV 709
           K   V+E+  D++ + VQ G +++++
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL 676


>gi|418906080|ref|ZP_13460107.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC345D]
 gi|377765380|gb|EHT89230.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC345D]
          Length = 782

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 205/709 (28%), Positives = 356/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ S++  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSKLNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|386728823|ref|YP_006195206.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
           71193]
 gi|387602416|ref|YP_005733937.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST398]
 gi|404478481|ref|YP_006709911.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           08BA02176]
 gi|418309746|ref|ZP_12921297.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21331]
 gi|418978614|ref|ZP_13526414.1| MutS [Staphylococcus aureus subsp. aureus DR10]
 gi|283470354|emb|CAQ49565.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST398]
 gi|365237869|gb|EHM78708.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21331]
 gi|379993438|gb|EIA14884.1| MutS [Staphylococcus aureus subsp. aureus DR10]
 gi|384230116|gb|AFH69363.1| MutS [Staphylococcus aureus subsp. aureus 71193]
 gi|404439970|gb|AFR73163.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           08BA02176]
          Length = 782

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKRADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|402570749|ref|YP_006620092.1| MutS2 family protein [Desulfosporosinus meridiei DSM 13257]
 gi|402251946|gb|AFQ42221.1| MutS2 family protein [Desulfosporosinus meridiei DSM 13257]
          Length = 787

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 208/727 (28%), Positives = 349/727 (48%), Gaps = 77/727 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           LE  +  L QT     +++  PL  +   ++I   +   + G ++   E+  +R TLRA 
Sbjct: 42  LESVRLALQQTEEGKNLLRGNPLFSVRGAKEIRPYIERCLRGGVIHGEELLEIRDTLRAG 101

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASE 133
             + + L        D  +++  L ++         LE++I  CI  D K   + D A+ 
Sbjct: 102 RKIKQLLQ-------DLREQFPGLWDITLPIEPQKPLEDEITRCISEDGK---VADNATP 151

Query: 134 DLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
           +L   R      + R  E+L++ L+  + Q      +  P+IT+R  R  + +K  ++  
Sbjct: 152 ELADFRRAINRLQNRIRESLEATLRNPSYQKI----LQDPIITQRSDRYVIPVKQEYRAS 207

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
            P GI  + S+SGAT F+EP   V   N    +   E  E   IL +L+A+I     EI 
Sbjct: 208 FP-GIVHDQSASGATLFIEPMPVVHLGNELREVILKEQREVQRILQMLSAQIEGRGDEIA 266

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
            L + + ++DL  A+A  +  M+   P L +   +    +      +HPL          
Sbjct: 267 DLHEALAQLDLVIAKAHLSVSMNAGAPELVAGQQIKLVQA------RHPL---------- 310

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                                     IS   VP+ +++  E   +VITGPNTGGKT ++K
Sbjct: 311 --------------------------ISGRVVPLSLELGIEFDTLVITGPNTGGKTVALK 344

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
            +GL + M+++GL +PA++  R+  F  I ADIGD QS+EQ+LSTFSGH+  IV+I++  
Sbjct: 345 VVGLMAAMNQSGLQIPAESDSRMGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIIDRS 404

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
              SLVL+DE+G+GTDP+EG ALA  IL  L +R    V TTHY  L     +  R +NA
Sbjct: 405 DGRSLVLLDEVGAGTDPTEGAALAMGILAELHERGCRTVSTTHYGALKTFAYETPRVKNA 464

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF  ETLRPTYR+L G  G SNA  IA  +G   +++++A   V     ER+    ++
Sbjct: 465 SVEFDTETLRPTYRLLIGIPGKSNAFTIAGRLGLSEEVLEKANTFV----TEREMQ-VAD 519

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
           L ++L E  R++E + + A +    +    + +E+++  LD     L A    +  + + 
Sbjct: 520 LIENLGETHREIEIEKQKAETGRQAVEKQTKALEEKSIRLDEELEILVALAKDEASEIIR 579

Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
            AK + + ++ + +  LR  +  + +  I+++      I            S +  S+  
Sbjct: 580 EAKREAEAIIDELKAALRKENKQQQD--IEKARQGFRKISAKLDQGRQVKRSGSELSADQ 637

Query: 670 PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA 729
              G+ V++  L  K   V+++P  +D VL+Q G M+V V  + ++     K+       
Sbjct: 638 IMLGQTVYMTKLRQK-GQVIKLPNSNDEVLIQAGIMKVMVPLSELKLAQEEKK-----AM 691

Query: 730 PRLRKQV 736
           PR  +Q+
Sbjct: 692 PRYSRQM 698


>gi|293509911|ref|ZP_06668620.1| MutS2 protein [Staphylococcus aureus subsp. aureus M809]
 gi|291467361|gb|EFF09878.1| MutS2 protein [Staphylococcus aureus subsp. aureus M809]
          Length = 782

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVALKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|302802119|ref|XP_002982815.1| hypothetical protein SELMODRAFT_445339 [Selaginella moellendorffii]
 gi|300149405|gb|EFJ16060.1| hypothetical protein SELMODRAFT_445339 [Selaginella moellendorffii]
          Length = 691

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 175/505 (34%), Positives = 255/505 (50%), Gaps = 33/505 (6%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           + D AS +L   R E+      L  L+ ++   I +  G     +     R+CV +   +
Sbjct: 182 VKDSASPELRTARMEQASCERKLQELMTRIV--IDRLAGDPNGQVASLDGRLCVAVSTEN 239

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
              +P G+ L  S+ G   ++EP  AV  NN   +        E  +L  LT ++     
Sbjct: 240 NSKVP-GLLLQSSAGGLVSYVEPSAAVALNNSLSQARADAAQAEYRVLDDLTTKLRPFLS 298

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN-----IEGIKHPLLL 301
              + +D V + D+  AR  ++  +    P          +S+++     +EG +HPLLL
Sbjct: 299 NFSFTLDIVADFDVVLARGRYSSSIGATRPSFVHAERDESESTLDEFLVLLEGARHPLLL 358

Query: 302 GSSLRSLSAASSNSNP-------LKSDVENSEMTVGSLSKGIS-----------DFPVPI 343
                +L  A +  N        +KS    S     +  + I+             PVPI
Sbjct: 359 EQHRGNLRDAKAKLNTKRKILNRMKSRAFTSAQDYQAAEEAITKAEEEVAELEASVPVPI 418

Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
           D  ++ ET+VV ITGPNTGGKTA++KTLGLA LM++AGLY+ AK    +PW D +LADIG
Sbjct: 419 DFLIKRETKVVTITGPNTGGKTAAIKTLGLAVLMARAGLYVLAKEPALIPWVDRVLADIG 478

Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
           D QSL Q+LSTFSGH+ RI  I E  +  SLVL+DE+G+GTD  EG AL  ++L+     
Sbjct: 479 DQQSLSQSLSTFSGHLLRIKRIKEESTSSSLVLLDEVGTGTDFVEGAALGMAMLESFAAG 538

Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
             L + TTH+ +L  LK  D RFENA+ EF  E L+PTYR+LWG  G SNALNIA  +G 
Sbjct: 539 SLLTLATTHHGELKMLKYSDDRFENASVEFDEEKLKPTYRLLWGIPGRSNALNIAARLGL 598

Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 583
             +II  A+ L      E      +E+  +L + R+K E     +  L  E    YR + 
Sbjct: 599 PEEIIMEARSLHGAANAEL-----NEVIMTLEQARQKFEHDLSKSQKLLGETRRHYRALS 653

Query: 584 DEAKDLD--RRAAHLKAKETQQVQQ 606
              K+++  R+ A L A +   V +
Sbjct: 654 IAQKEIEEYRKTAALDANDQLAVAE 678


>gi|7387927|sp|Q9ZEH5.1|MUTS2_STAAU RecName: Full=MutS2 protein
 gi|3776110|emb|CAA11403.1| MutS-like protein [Staphylococcus aureus]
          Length = 719

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 2   LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 59

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 60  DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 117

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 118 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 172

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 173 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 231

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 232 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 258

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 259 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 310

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 311 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 370

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 371 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 430

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 431 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 485

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 486 EQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLRE 537

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 538 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 589

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 590 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 636


>gi|383761505|ref|YP_005440487.1| MutS2 protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
 gi|381381773|dbj|BAL98589.1| MutS2 protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
          Length = 811

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 201/647 (31%), Positives = 320/647 (49%), Gaps = 83/647 (12%)

Query: 21  QKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q+ L QT  A  ++ Q   +    + D+  +L+ A  G +L P ++  ++ TL+    + 
Sbjct: 44  QEWLAQTREAYQLLGQKDDISFGGVSDLRPLLDRAERGAILLPPDLLEIKFTLQRARQLR 103

Query: 80  KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
             LT            +  L E+  +      L E+I  CI+ +   ++D AS +L  IR
Sbjct: 104 TLLTRIE-------SSFPHLAEMAADIEPCDHLVEQISHCINDRG-DVMDSASPELARIR 155

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
           +E +   E L S L ++         + + L+T+R+ R  + I+A +K  + +GI  + S
Sbjct: 156 SELRIAQERLLSTLDRIIHSADIRPYLQEALVTQRQGRYVIPIRAEYKGNI-EGIIHDQS 214

Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
           +SGAT F+EP   V+ NN    L   E  E   IL  L+  +A+    ++  +  +  +D
Sbjct: 215 ASGATLFIEPLKVVQQNNAVRELELQEEKEVRRILLELSTAVAEEAVYLRRNVQALARLD 274

Query: 260 LAFARAGFAQWMDGVCPIL--------------SSQSHVSFDSSINIEGIKHPLLLGSSL 305
             FA+A +A  +D   P +              + ++     S I++   +HPLL     
Sbjct: 275 FTFAKARYAYALDATVPEMLPFQPRRSKQKRDETEEAAAHPGSIIDLRRARHPLL----- 329

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                     +P          TV           VPID+ ++ +T ++VITGPNTGGKT
Sbjct: 330 ----------DP---------QTV-----------VPIDVYLDDDTYIIVITGPNTGGKT 359

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KT+GL +LM+++GL +PA    RL  F+ I ADIGD QS+EQNLSTFS H++ I+ I
Sbjct: 360 VTLKTVGLLTLMAQSGLMIPADVGSRLSVFEGIYADIGDEQSIEQNLSTFSSHMTNIIAI 419

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           LE     SLVL+DE+G+GTDP EG ALA ++L+ LRDR      TTHY+DL         
Sbjct: 420 LEEADPHSLVLLDELGAGTDPEEGSALAIALLENLRDRGITTFATTHYSDLKLYAHNTPG 479

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
             NA+ EF +ETL PTY +  G  G SNAL IA+ +G +  I+++A+ +V   RP+  Q 
Sbjct: 480 VRNASVEFDVETLSPTYELSIGLPGRSNALTIARRLGLNPVIVEKAESIV---RPDTLQA 536

Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
            K      L+++ R+   +A  AA              + AK  +R+A  L+A    Q+ 
Sbjct: 537 DK------LLDDIRRARQEALEAA--------------ERAKARERQAQLLEADLRYQLA 576

Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH 652
           Q +  A+  +    +       +A+  EI  L +++ S  +    AH
Sbjct: 577 Q-IEQARRSVIAETRALMQAELEAARKEIEQLRRQARSGFSTGTTAH 622


>gi|379020851|ref|YP_005297513.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
           subsp. aureus M013]
 gi|359830160|gb|AEV78138.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
           subsp. aureus M013]
          Length = 717

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 204/708 (28%), Positives = 353/708 (49%), Gaps = 97/708 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +  + 
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVANTIEF 325

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
           + D               V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 326 MEDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDCLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
           K   V+E+  D++ + VQ G +++++      PI + ++K     + R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKKKLSQR 692


>gi|397906326|ref|ZP_10507138.1| Recombination inhibitory protein MutS2 [Caloramator australicus
           RC3]
 gi|397160629|emb|CCJ34475.1| Recombination inhibitory protein MutS2 [Caloramator australicus
           RC3]
          Length = 788

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 223/711 (31%), Positives = 360/711 (50%), Gaps = 79/711 (11%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
           +P    LE   +L     A   +++   L L  ++DI   +  A  G  L+PSE+  V  
Sbjct: 35  LPTSNLLEVEDRLRETKEAYDVVLKWGSLPLEGVKDIEDSVKRAKMGFTLTPSELLRVSD 94

Query: 71  TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
            LR    V K+L ++   DG   + Y  + E++++  ++  LEE I   I  +  I  DR
Sbjct: 95  ILR----VTKRL-KSFFADGAKKENYPIINEIIESLFYIKSLEEDIERAIVSEEEID-DR 148

Query: 131 ASEDLELIRA----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           ASE L  IR     + +R  E L S+L  ++  +       +P+IT R  R  + +K+  
Sbjct: 149 ASEKLYSIRRAIKDKNQRVKEKLQSMLHSLSKYL------QEPIITMRNGRYVIPVKSEF 202

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           K  +  G+  + S+SG+T F+EP   VE NN    L   E  E   IL  L+ ++AK+  
Sbjct: 203 KGSVA-GLVHDQSASGSTLFIEPMPIVELNNEIRELELKEKVEIERILKELSEKVAKNSE 261

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           E+ +  + +  +D   A+A F   +D   P       V+    IN++  +HPL+      
Sbjct: 262 ELLHDNENIAYLDFLMAKAKFGLDLDASIP------EVNDKGIINMKRARHPLI------ 309

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                         D E                 VPIDI++      +VITGPNTGGKT 
Sbjct: 310 --------------DKEKV---------------VPIDIRLGQNYNALVITGPNTGGKTV 340

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KT GL +LM+ AGL +P  +   +  F+ + ADIGD QS+EQ+LSTFS H+  I++I+
Sbjct: 341 TLKTTGLLTLMAMAGLAIPCSDGSTVSVFNKVFADIGDEQSIEQSLSTFSSHMKNIINIV 400

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           +    +SL+L+DE+G+GTDPSEG ALA S+L+Y   +    V TTHY+++     +   F
Sbjct: 401 KEADEKSLILVDELGAGTDPSEGAALAMSLLEYFYKKGAKLVATTHYSEIKVFAMEKEGF 460

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
           ENA+ EF +ETLRPTYR+L G  G SNA  I+K +G D  II RA++ +      +   +
Sbjct: 461 ENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLDEGIINRAREFI-----SKDVAK 515

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
             ++ QSL  +   LE +      +  E ++L +E  ++   L+ +    + KE ++ Q+
Sbjct: 516 FEDVIQSLQNKTLLLEREIDEVQKIKRENLELKKEYSEKKYKLESQ----RDKEIKKAQE 571

Query: 607 E----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA----HRPDDDF 658
           E    +  AK + D ++++  N+LR   A E  S I+E+E A   +          +++ 
Sbjct: 572 EARRIIRQAKEEADAILKEL-NELR-KRALEAES-IREAEEARKKLKNKLDAMSSKEEEV 628

Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
            V +    +   + G++V+V ++  K  TV+ +P     VLVQ G M++ V
Sbjct: 629 IVKDGMIEARDVKVGDEVYVSTVSAK-GTVLSLPDAKGEVLVQIGVMKMSV 678


>gi|310658450|ref|YP_003936171.1| recombination and DNA strand exchange inhibitor protein
           [[Clostridium] sticklandii]
 gi|308825228|emb|CBH21266.1| recombination and DNA strand exchange inhibitor protein
           [[Clostridium] sticklandii]
          Length = 793

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 197/654 (30%), Positives = 322/654 (49%), Gaps = 61/654 (9%)

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIG 117
           +L P ++  +  TLR    V   L ++           +P+L+ L +N   L +LE++I 
Sbjct: 88  ILEPYQLLKISDTLRICRKVKNFLRDSEN---------TPILQQLSENITILKDLEDEID 138

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
             I  +  I  D AS +L  +R       E +   L  + +    +  + + ++T R+ R
Sbjct: 139 NAIISEEEI-SDNASPELSKVRRSITNTKEQIRQKLSSIVSSSQYSKYLQEAIVTMRQDR 197

Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
             V +KA ++  +P GI  + SSSGAT F+EP   VE NN        E  E   IL++L
Sbjct: 198 FVVPVKAENRSNVP-GIVHDSSSSGATLFIEPMAVVEMNNKLREYKVKEQEEIERILTVL 256

Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
           +A    S  EI+     + EID   A+   +  M    P ++S      D  +N++  +H
Sbjct: 257 SAMAGLSYHEIRTNEQMIAEIDFIMAKGKLSVKMKAQEPFINS------DLVMNLKNARH 310

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
           PL+                    D +N                VP +I +  E   +VIT
Sbjct: 311 PLI--------------------DPKNV---------------VPSNINIGKEFDTLVIT 335

Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
           GPNTGGKT ++KT+GL ++M+++GL+LP      +  FD I ADIGD QS+EQ+LSTFS 
Sbjct: 336 GPNTGGKTVTLKTIGLFAIMAQSGLHLPTDYGTSICIFDNIFADIGDEQSIEQSLSTFSS 395

Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
           H++ IV+IL+ V    LVL DE+G+GTDP EG ALA SIL  LR+   + V TTHY++L 
Sbjct: 396 HMTHIVNILDEVKDNCLVLFDELGAGTDPLEGAALAVSILDRLREYKLITVATTHYSELK 455

Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
                  R ENA+ EF ++TL PTYR+L G  G SNA  I++ +G   +II     L  +
Sbjct: 456 HYALTTNRVENASVEFDVQTLSPTYRLLIGIPGKSNAFEISRKLGLKEEII-----LAAK 510

Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
              +       ++ + + + R+++E++   +  ++ +   L   ++++   LD +   + 
Sbjct: 511 HHLDSDSISMEDVLKEIDDNRKQIETEREQSRIIYEDAKKLQTRLKEKESKLDTQKDKII 570

Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
            +   + ++ L  AK + D  +++     + A    IN  I+ S   I   ++ +   + 
Sbjct: 571 QEAKNEARKLLQQAKEEADEAIKELRELSKRAEKQNINKEIEASRRKIKTSLDKYGYKNQ 630

Query: 658 FSVSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
             ++E +  +       G++V+V S   K ATVV V  D    LVQ G M++ +
Sbjct: 631 DLITEKDVINPVDIIVAGDEVYVPSFS-KNATVVSVDNDKKEALVQIGIMKLNL 683


>gi|418563215|ref|ZP_13127657.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21262]
 gi|371971759|gb|EHO89155.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21262]
          Length = 782

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 354/709 (49%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++     GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDCLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNIQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|291524453|emb|CBK90040.1| MutS2 family protein [Eubacterium rectale DSM 17629]
          Length = 792

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 209/677 (30%), Positives = 328/677 (48%), Gaps = 78/677 (11%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDS-----LQRYSPLL 100
           DI G LN+    +LL    IC++    + V    +   +  + D  S     ++  S L 
Sbjct: 79  DIGGALNTT---ELL---RICSLLEVAKRVKAYGRNAMDNEKQDSLSGLFAGIEPVSALC 132

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
           + +K C  L+E E             I D AS +L  IR   +   + + + L K+    
Sbjct: 133 DEIKRC-ILSEEE-------------IADDASPELFKIRKSIRGMNDRIHAQLTKLMNNS 178

Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
                +   ++T R  R C+ +KA  K  +P G+  + SS+G+T F+EP   V  NN   
Sbjct: 179 TTRTYLQDAVVTMRDGRYCLPVKAEAKGNVP-GMMHDQSSTGSTLFIEPMAVVNLNNELK 237

Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSS 280
            L   E  E   IL+ L+ ++A +   ++   + + E+D  FA+A  A+  +GV P  ++
Sbjct: 238 ELFIKEQEEIEKILAALSDKVAMNAAALEQDYEILSELDFIFAKANLAKSYNGVAPEFNT 297

Query: 281 QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFP 340
           + H      INI   +HPLL                    D +N                
Sbjct: 298 EGH------INIRKGRHPLL--------------------DAKNV--------------- 316

Query: 341 VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILA 400
           VPID+++  E + ++ITGPNTGGKT S+KT+GL +LM +AGL++PA +  +L  F+ + A
Sbjct: 317 VPIDVRLGEEYKQLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAADRSKLAIFEDVFA 376

Query: 401 DIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYL 460
           DIGD QS+EQ+LSTFS H++ IV ILE     SL L DE+ SGTDP+EG ALA SIL  L
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVKILEKADDRSLCLFDELCSGTDPTEGAALAISILNRL 436

Query: 461 RDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKS 520
                + + TTHY++L          ENA  EF++ETL PTYR+L G  G SNA  I+  
Sbjct: 437 HQYGAITMATTHYSELKVYALSTDGVENACCEFNVETLSPTYRLLIGIPGKSNAFAISSK 496

Query: 521 IGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYR 580
           +G D  II+ A+      R         +L  SL  +R+ +E +     S  AEI  L +
Sbjct: 497 LGLDENIIEDAKS-----RINDNDLDFEDLIASLESQRQTIEKEQLEINSYKAEIEKLKK 551

Query: 581 EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKE 640
           ++E++ + +D+    +  +  ++  + L  AK   D  +++F N+     A  ++ + KE
Sbjct: 552 QLEEKNERIDKSKDKILREANEEAYKILQDAKELADKTIRNF-NKYGQGQA-PMSQMEKE 609

Query: 641 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDT 697
             +    + +  +   D   +    +   P+    G+ V V SL  K  TV  +P     
Sbjct: 610 RSALRDKMNDKEKKLSDIKKNTAKANHKAPKKLRIGDSVLVLSLNLK-GTVHTLPNAKGD 668

Query: 698 VLVQYGKMRVRVKKNNI 714
           + VQ G +R  V  N++
Sbjct: 669 LYVQMGILRSLVNINDL 685


>gi|257425195|ref|ZP_05601621.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257427858|ref|ZP_05604256.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257430493|ref|ZP_05606875.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433255|ref|ZP_05609613.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus E1410]
 gi|257436094|ref|ZP_05612141.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus M876]
 gi|282910719|ref|ZP_06318522.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282913919|ref|ZP_06321706.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus M899]
 gi|282918842|ref|ZP_06326577.1| MutS2 protein [Staphylococcus aureus subsp. aureus C427]
 gi|282923964|ref|ZP_06331640.1| MutS2 protein [Staphylococcus aureus subsp. aureus C101]
 gi|293526498|ref|ZP_06671183.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus M1015]
 gi|417889008|ref|ZP_12533107.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21195]
 gi|257272171|gb|EEV04303.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257274699|gb|EEV06186.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278621|gb|EEV09240.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281348|gb|EEV11485.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus E1410]
 gi|257284376|gb|EEV14496.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus M876]
 gi|282313936|gb|EFB44328.1| MutS2 protein [Staphylococcus aureus subsp. aureus C101]
 gi|282316652|gb|EFB47026.1| MutS2 protein [Staphylococcus aureus subsp. aureus C427]
 gi|282321987|gb|EFB52311.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus M899]
 gi|282325324|gb|EFB55633.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|290920570|gb|EFD97633.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus M1015]
 gi|341853076|gb|EGS93958.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21195]
          Length = 782

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|15924134|ref|NP_371668.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926728|ref|NP_374261.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus N315]
 gi|156979466|ref|YP_001441725.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus Mu3]
 gi|255005930|ref|ZP_05144531.2| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus Mu50-omega]
 gi|54037877|sp|P65496.1|MUTS2_STAAN RecName: Full=MutS2 protein
 gi|54041518|sp|P65495.1|MUTS2_STAAM RecName: Full=MutS2 protein
 gi|229486377|sp|A7X169.1|MUTS2_STAA1 RecName: Full=MutS2 protein
 gi|13700944|dbj|BAB42240.1| MutS-like protein [Staphylococcus aureus subsp. aureus N315]
 gi|14246914|dbj|BAB57306.1| MutS-like protein [Staphylococcus aureus subsp. aureus Mu50]
 gi|156721601|dbj|BAF78018.1| MutS-like protein [Staphylococcus aureus subsp. aureus Mu3]
          Length = 782

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 205/709 (28%), Positives = 354/709 (49%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L  +I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  +L+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERVLTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|212638407|ref|YP_002314927.1| recombination and DNA strand exchange inhibitor protein
           [Anoxybacillus flavithermus WK1]
 gi|212559887|gb|ACJ32942.1| DNA mismatch repair protein, MutSB [Anoxybacillus flavithermus WK1]
          Length = 836

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 217/707 (30%), Positives = 347/707 (49%), Gaps = 84/707 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I D+      A  G  LSP E+  +  T+RA   + KK  EA E D   +  Y+   
Sbjct: 120 LGGIFDVRMQTKRASIGGTLSPHELLDIASTMRAARQL-KKFLEATEADLPHMIAYAA-- 176

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
                   L ELE++I  CID +   +LD AS+ L  +R + +    R  + L+S+++  
Sbjct: 177 ----QIVPLPELEQRIYHCID-ESGDVLDGASDRLRSLRHQLRTIEGRVRDKLESIIRSS 231

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           +AQ      +   +IT R  R  + +K  +++    GI  + SSSGAT F+EP+  VE N
Sbjct: 232 SAQ----KTLSDAIITIRNDRYVIPVKQEYRHTY-GGIVHDQSSSGATLFIEPQSVVELN 286

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N   +L   E  E   ILS L+A + +    I   ++ + ++D  FA+A +A+ +    P
Sbjct: 287 NELQQLRVKEKQEIERILSELSASVGEQATTIIENVELLAQLDFLFAKAKYAKAIKATKP 346

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
            ++ + ++    +      +HPL+                P                   
Sbjct: 347 AINERGYIRLIQA------RHPLI----------------P------------------- 365

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
           SD  VP DI++      +VITGPNTGGKT ++KT+GL ++M++AGL +PA +  +L  F 
Sbjct: 366 SDEVVPNDIELGSNYTTMVITGPNTGGKTVTLKTIGLFTVMAQAGLQVPALDGSQLAVFR 425

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            + ADIGD QS+EQ+LSTFS H+  IVDIL+ V   SLVL DE+G+GTDP EG ALA +I
Sbjct: 426 AVYADIGDEQSIEQSLSTFSSHMVNIVDILKQVDEHSLVLFDELGAGTDPQEGAALAIAI 485

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L  + +R    V TTHY +L           NA+ EF +ETL PTY++L G  G SNAL+
Sbjct: 486 LDEVHNRGARVVATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGIPGRSNALD 545

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I++ +G D  II RA+  +       + +    +  SL + +++ E +   A  L  E  
Sbjct: 546 ISRRLGLDEHIIARARTYI-----SAESNEVENMIASLEQSKKRAEEEWEQAEKLRQEAE 600

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEIN 635
            L  E+E +  + + +   L  +  ++ +  +  A    + ++Q+  E Q +   A + +
Sbjct: 601 QLRNELEKQWTEFNEQQDRLLERAKEEAEFIVKKAMKTAEEIIQNLREMQKKQVIAMKEH 660

Query: 636 SLI---KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 692
            LI   K+ E AI  I       D     +   +  +   G++V V  L  K   + +V 
Sbjct: 661 ELIDARKKLEEAIPQI-------DTKKKKQAQKAKQSLHPGDEVKVIHLNQKGQLIEKV- 712

Query: 693 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTC 739
             D   LVQ G ++++V + N++ +        ++PAP   K + T 
Sbjct: 713 -SDKEWLVQIGILKMKVDEENLQYV--------SSPAPIETKPIATV 750


>gi|123965482|ref|YP_001010563.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
           marinus str. MIT 9515]
 gi|123199848|gb|ABM71456.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
           marinus str. MIT 9515]
          Length = 803

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 215/736 (29%), Positives = 361/736 (49%), Gaps = 84/736 (11%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
           MG  VV + +IP     E S++LL +T     + ++  + +  S + DI   +     G 
Sbjct: 41  MGKNVVLQFEIP--TEYEISRRLLKETIEINELEKNLDKSISFSGVFDICKNIEICSKGG 98

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           +++ S++  +  T+ A  N+ K L     LD +     S  L+ L + N   ++E+ +  
Sbjct: 99  VINSSDLLEIAETISASRNLKKIL-----LDFEQRPFISAFLKGLIDHN---QIEKILKN 150

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
            I+    I  DRAS+ L  +R E          L+ K          I   ++  R  R 
Sbjct: 151 GIESNGRI-SDRASQKLANLRQELLSKKSERRVLVNKFIQNNLPY--IQDTIVGDRYGRP 207

Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN----MEVRLSNSEIAEETAIL 234
            + IK  +      GI  + S+SG T ++EP+  V   N    ME R++     EE  +L
Sbjct: 208 VLAIKVQYAEKFK-GIIHDSSASGNTIYLEPESIVLKGNKIASMEARVA----GEEFKLL 262

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
              +  I  + + +  + + +L  + +  R+ ++ W+ G  PI+ +   VS      + G
Sbjct: 263 KEWSHIIRDNNQSLLEMSNILLRAEFSLTRSRYSNWIGGNAPIVENSPIVS------LMG 316

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
             HPLL+  + +  +A                             PV ID  ++  T+VV
Sbjct: 317 FSHPLLIWENKKKQAAK----------------------------PVSIDFHIDRNTKVV 348

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
            ITGPNTGGKT ++K LG+A LM+++GL++P+   P +P+   I  DIGD QSLE NLST
Sbjct: 349 AITGPNTGGKTVALKGLGIALLMARSGLFIPSIQKPIIPFCPNIFVDIGDDQSLEGNLST 408

Query: 415 FSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           FSGHI RI +ILE ++ +   S+VL+DEIGSGTDPSEG ALA ++L+       + + TT
Sbjct: 409 FSGHILRIKNILEALNNKKGFSVVLLDEIGSGTDPSEGTALAIALLKEFAIVSDITLATT 468

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY D+  LK  D RFEN +  F  E+ +P Y + WG  G SNAL+I+K IG + KI+  A
Sbjct: 469 HYGDIKALKYSDNRFENVSVAFDEESFKPKYTLNWGIPGRSNALSISKRIGINEKILNNA 528

Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
                 L+P ++    + + + L EER K +  A  AA L A    L+ EI+++ +    
Sbjct: 529 SNY---LKP-KEVENINNIIKGLEEERLKQQKSAEEAAELIARTEILHDEIKNKYEFQKL 584

Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE---INSLIKESESAIAAI 648
            A  ++  E Q++ + +  A+ ++  +++  ++Q  +A+ ++   I   +KE E+     
Sbjct: 585 NALKIQEAEKQKLSKHIKEAQKEVINLIKKLKDQ--NATGEDARLIGIRLKEIET----- 637

Query: 649 VEAHRPDDDFSVSETN-TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
                  D  + S    T+S++P+ G+ + +KSL      ++++     +  V+ G  R 
Sbjct: 638 -------DHLTQSNVERTTSWSPKIGDFIKIKSLNSS-GQIIDIDEKAKSYEVKCGSFRS 689

Query: 708 RVKKNNIRPIPNSKRK 723
            +  N+   +   K K
Sbjct: 690 TLSINDFEGLNGEKPK 705


>gi|297617881|ref|YP_003703040.1| MutS2 family protein [Syntrophothermus lipocalidus DSM 12680]
 gi|297145718|gb|ADI02475.1| MutS2 family protein [Syntrophothermus lipocalidus DSM 12680]
          Length = 779

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 227/728 (31%), Positives = 359/728 (49%), Gaps = 93/728 (12%)

Query: 7   QKAQIPFG--KSLE-------ESQKLLNQ-TSAALAMMQSQPLD-LSTIEDIAGILNSAV 55
           QKA  P G  K+LE       E+  +  Q T  AL +++ +    L+ ++DI   +    
Sbjct: 20  QKACSPMGAEKALELQPVYDLETASMRQQETGEALKVLRLRDTGFLTGVKDIRQHMRRVR 79

Query: 56  SGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE-LEE 114
           SG  LS  E+  V   +RA + + + + E          R  P L  L    F+ E +E 
Sbjct: 80  SGVPLSTGELLDVGALVRA-SRLARDMVEG---------RECPGLCGLTGDLFVDEGIER 129

Query: 115 KIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPL 170
            I   ID +   + D AS +L+ IR      + R  E L   ++    Q F    +   +
Sbjct: 130 AIRESID-EGGEVRDTASPELKAIRNRIATAKNRVREYLQEFVRSSHYQKF----LQDAI 184

Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
           IT+R+ R  V +KA ++  +  GI  + S+SGAT F+EP+  V  NN   RL  +E  E 
Sbjct: 185 ITERQGRYVVPVKAEYRSEV-KGIIHDESASGATVFVEPEAVVHVNNDIRRLEMAENREI 243

Query: 231 TAIL----SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
             IL    SLL   +++ ER+++ L D    +DL  A+   A  M+ V P L+ Q     
Sbjct: 244 EKILRRLTSLLEPVVSELERDLEILTD----LDLVLAKGRLALEMNAVAPRLNGQGVFVL 299

Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
             +      +HPLL                                 KG     VP+D++
Sbjct: 300 RRA------RHPLL--------------------------------GKG----AVPVDLE 317

Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
           +     ++VITGPNTGGKT ++KT+GL +LM+ +GL++PA     +   D + ADIGD Q
Sbjct: 318 LGKGFDILVITGPNTGGKTVTLKTVGLLTLMAMSGLFVPAAEGTEIALVDAVYADIGDEQ 377

Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
           S+EQ+LSTFS H++ I+DIL+  + +SLVL+DE+G+GTDP EG AL  +IL  L  +   
Sbjct: 378 SIEQSLSTFSSHMTNIIDILKRATSQSLVLLDELGAGTDPVEGAALGRAILGELLAKGVK 437

Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
           AVVTTH ++L     ++ + ENA  EF   TL+PTYR+  G  G SNAL IA+ +G D +
Sbjct: 438 AVVTTHQSELKVFAFQEAKVENACVEFDPITLQPTYRLSIGIPGHSNALEIAERLGLDHR 497

Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
           I+++A++ V    P+ +Q     +   + E RR+LES       L   + +  R +++E 
Sbjct: 498 IVEKARQFV----PQSEQD-LGRIINKVQEHRRRLESDIYEVEELRRRMEEERRALQEEK 552

Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 646
           + L R    +  K  ++ +  L   K + DTV+ + +  L++    E      E E A  
Sbjct: 553 EKLRREREEIIRKTREEAESYLRKVKGEADTVLDEVKRSLKER---ETPPKWHELEKARH 609

Query: 647 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
            +          S+     +   P  G  V ++S+G +   ++E P D D VLVQ G ++
Sbjct: 610 RVRGLRTERQVGSLQAPEGAELNP--GAYVEIRSIGRR-GYILEGPNDKDEVLVQVGILK 666

Query: 707 VRVKKNNI 714
           + V ++++
Sbjct: 667 LTVPRDDV 674


>gi|138896257|ref|YP_001126710.1| recombination and DNA strand exchange inhibitor protein
           [Geobacillus thermodenitrificans NG80-2]
 gi|189030428|sp|A4IRL1.1|MUTS2_GEOTN RecName: Full=MutS2 protein
 gi|134267770|gb|ABO67965.1| DNA mismatch repair protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 784

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 218/717 (30%), Positives = 351/717 (48%), Gaps = 76/717 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
           L+E    L +T  A A+++ +   PLD   + DI   L  A  G +LSP E+  V  T  
Sbjct: 40  LDEVAVWLEETDEAAAVLRLRGYVPLD--GVVDIRSHLKRAAIGGVLSPIELLEVAATA- 96

Query: 74  AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
           A +   K+L  +   +   L R +   + L        LEE I   ID    + LD AS+
Sbjct: 97  AASRQMKQLIMSLHDEHGGLARLADYADELAEV---PALEEDIRRSIDDHGEV-LDTASD 152

Query: 134 DLE----LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L      IRA   R  E L+S+++  +AQ      +   +IT R  R  + +K  ++  
Sbjct: 153 RLRSLRGQIRAAEARIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYRSA 208

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
              GI  + S+SGAT F+EP+  VE NN        E  E   IL  L+A++A+ +  +K
Sbjct: 209 Y-GGIVHDQSASGATLFIEPQVVVELNNALREARAKEKQEIERILRELSAKVAEHDEPLK 267

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
             ++ +   D  FA+A +A+ +    P ++++ ++ F  +      +HPL+         
Sbjct: 268 RAVEALAHFDFLFAKAKYARRLQAAKPAVNNRGYLRFLQA------RHPLI--------- 312

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                                       D  VP DI +  +   +VITGPNTGGKT ++K
Sbjct: 313 --------------------------DQDKAVPNDIVLGGDYTTIVITGPNTGGKTVTLK 346

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+GL ++M++AGL++PA +      F  + ADIGD QS+EQ+LSTFS H+  IVDIL  V
Sbjct: 347 TVGLLTIMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILRHV 406

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
             ESLVL DE+G+GTDP EG ALA +IL  +  R    V TTHY +L           NA
Sbjct: 407 DEESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVVNA 466

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF  ETLRPTY++L G  G SNA +I++ +G D +II+RA     +++   + H    
Sbjct: 467 SVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERA-----KVQVSAESHSVEN 521

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
           +  SL   +++ E     A S   E   L  E E + ++L+ + A   A+  Q+    + 
Sbjct: 522 MIASLERSKKQAEEDEARAHSAREEAERLRAEWEQKLEELEDKKAEQLAEAAQKATDIIR 581

Query: 610 FAKVQIDTVVQDFENQLRDASAD-EINSLI--KESESAIAAIVEAHRPDDDFSVSETNTS 666
            A+ + + ++ +     ++  A+ + + LI  K+  +A   +VE          ++  T+
Sbjct: 582 AAEREAERIINELRRLQKEKQAEVKEHELIAAKQRLAAAVPVVEK------RKKTKKATA 635

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
               Q G++V V SL  K   + +V   +D   VQ G +++++ + ++  I ++  K
Sbjct: 636 RHAFQSGDEVKVTSLNQKGYLLEKV--SEDEWQVQLGILKMKIHERDLEYIGSAPAK 690


>gi|418329211|ref|ZP_12940290.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis 14.1.R1.SE]
 gi|418631982|ref|ZP_13194426.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU128]
 gi|420192813|ref|ZP_14698670.1| MutS2 family protein [Staphylococcus epidermidis NIHLM023]
 gi|365230873|gb|EHM71948.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis 14.1.R1.SE]
 gi|374833651|gb|EHR97326.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU128]
 gi|394260629|gb|EJE05438.1| MutS2 family protein [Staphylococcus epidermidis NIHLM023]
          Length = 782

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 210/686 (30%), Positives = 339/686 (49%), Gaps = 91/686 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ +E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR+E     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINETCDAHDL--FDHASYTLQSIRSEISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  ++ +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P          D +I +    HPLL            +N+     DVE            
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF +ETL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++        +   + + +SL +  ++++ Q        R A
Sbjct: 494 DISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELDRLVREA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
              H  +   Y++ ++  K L   A   K K  Q+V+     A  + D ++++  N LRD
Sbjct: 549 QQTHDALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               E    +KE E     I +  + DD + V          ++     G++V V S G 
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV 709
           K   V+E+ GD++ V VQ G +++++
Sbjct: 653 K-GEVLELVGDEEAV-VQMGIIKMKL 676


>gi|299535519|ref|ZP_07048840.1| MutS2 protein [Lysinibacillus fusiformis ZC1]
 gi|424739203|ref|ZP_18167624.1| MutS2 protein [Lysinibacillus fusiformis ZB2]
 gi|298728719|gb|EFI69273.1| MutS2 protein [Lysinibacillus fusiformis ZC1]
 gi|422946841|gb|EKU41246.1| MutS2 protein [Lysinibacillus fusiformis ZB2]
          Length = 788

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 214/715 (29%), Positives = 348/715 (48%), Gaps = 82/715 (11%)

Query: 22  KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           +LL +    L++++ +  + +  I D+      A  G +L+  E+  +  T+RA + + +
Sbjct: 46  QLLEEMDEGLSILRVKGNVPMGGIFDVRPSARRAQIGGMLAAVELMEISSTIRA-SRILR 104

Query: 81  KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR- 139
              E  +L+ D +      +   +    LT L+ +I  CID     +LD AS+ L  IR 
Sbjct: 105 NFIE--DLEADEVIDIPHFISKKEAMPVLTGLQHEINNCIDDNG-AVLDSASQTLRSIRQ 161

Query: 140 ---AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
              AE  +    L+SL++   A    A  +   L+T R  R  + +K  +++    GI  
Sbjct: 162 SLRAEEGKVRSKLESLIRGSNA----AKMLSDTLVTIRNDRFVIPVKQEYRHHY-GGIVH 216

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + SSSG T F+EP   V+ NN   RL   E AE   IL  L+A + +   ++  L+  + 
Sbjct: 217 DQSSSGQTLFIEPDSVVQANNEIHRLKMKEQAEIERILLALSAMVQEVASDLFNLVKVLG 276

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           +ID+  A+  + Q      P ++       D  I +   +HPLL                
Sbjct: 277 DIDVILAKGKYGQANKCTMPKMNQ------DGYIRLIRARHPLL---------------- 314

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
           P+                   D  +P DI+   +   +VITGPNTGGKT ++KT+GL +L
Sbjct: 315 PI-------------------DSAIPNDIEFGKDITAIVITGPNTGGKTVTLKTVGLCTL 355

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++AGL +PA +   L  F+ + ADIGD QS+EQ+LSTFS H+  IVDIL+    ESLVL
Sbjct: 356 MAQAGLPVPALDGSELAVFEQLFADIGDEQSIEQSLSTFSSHMVNIVDILQKFDHESLVL 415

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA SIL  +  R    + TTHY +L           NA+ EF +E
Sbjct: 416 FDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVANASVEFDIE 475

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TL PTYR+L G  G SNA  I+  +G    II RA+      R     H    +  SL E
Sbjct: 476 TLSPTYRLLIGVPGRSNAFEISSRLGLPESIIDRAKGFTGTDR-----HEVESMIASLEE 530

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
            RR+ E  A  + +L  E   L +E++D+ +  + R   L  K  ++ ++ ++ AK + +
Sbjct: 531 TRRQSEDDAERSHALLLESETLRKELQDKLQAYEERKEALDKKAKEKARKIVDEAKREAE 590

Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR------PDDDFSV----SETNTS 666
            ++ +     ++A     + ++KE E     ++EA +      P +D  V    ++    
Sbjct: 591 AIIAELREMRKNA-----DQVVKEHE-----LIEARKRLEEATPLEDNKVLKKAAQVKAR 640

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           +     G++V V S G +  T++E   + + V VQ G +++++  +++  I   K
Sbjct: 641 AQNLVVGDEVKVLSYGQR-GTLLEKVSNTEWV-VQMGILKMKISDSDLEYIKPEK 693


>gi|15895607|ref|NP_348956.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium acetobutylicum ATCC 824]
 gi|337737556|ref|YP_004637003.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium acetobutylicum DSM 1731]
 gi|38604976|sp|Q97GM6.1|MUTS2_CLOAB RecName: Full=MutS2 protein
 gi|15025349|gb|AAK80296.1|AE007734_10 DNA mismatch repair protein mutS, YSHD B.subtilis ortholog
           [Clostridium acetobutylicum ATCC 824]
 gi|336292751|gb|AEI33885.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium acetobutylicum DSM 1731]
          Length = 788

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 225/735 (30%), Positives = 359/735 (48%), Gaps = 83/735 (11%)

Query: 12  PFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           P+G SL E ++ + +T  A  ++  +   P + +   D+   ++ A  G  L+P ++  V
Sbjct: 36  PYG-SLYEVKEHIEETKEAFELLMKKGAPPFEGAY--DVTEAVSMAEKGFSLAPGQLLKV 92

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
              LR      + ++   E +      Y  + ++      L  +E+ I F        I 
Sbjct: 93  GSMLRCARKFKEYISHKEEEES-----YRIIEDICSGIIPLKNIEDNI-FNAIIGEEEIS 146

Query: 129 DRASEDLELIRAERKRNMENLDSLLK-KVAAQIFQ-AGGIDKPLITKRRSRMCVGIKASH 186
           D+AS  L  IR    R++++ ++ +K KV A +   +  + + L T R  R  + +KA +
Sbjct: 147 DKASTALYSIR----RSLKDKNASIKDKVNAMMRSYSKYLQENLYTIRGERYVIPVKAEY 202

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           K  +P G+  + SS+GAT F+EP G V  NN    L   E AE   IL  L+A I KS  
Sbjct: 203 KAQVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIERILRELSALIYKSIV 261

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
            +K     V E+D  FA+A +A  ++   P      HV+    I+I   +HPL+      
Sbjct: 262 AVKNNEKIVTELDFIFAKAKYASSINATAP------HVNDKGVIDIVMGRHPLI------ 309

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                    +P K                     VP++I +  E   +VITGPNTGGKT 
Sbjct: 310 ---------DPAKV--------------------VPLNIYMGREFTSLVITGPNTGGKTV 340

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KT GL  +M+ +GL +PA+ +  + +F  + ADIGD QS+EQ+LSTFS H++ IV I+
Sbjct: 341 TLKTTGLLEVMAMSGLMIPARENSTISFFKEVYADIGDEQSIEQSLSTFSSHMTNIVRII 400

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           +    +SLVL DE+G+GTDP+EG ALA SIL+ LR R    V TTHY++L     K    
Sbjct: 401 DDADEDSLVLFDELGAGTDPTEGAALAISILEALRKRGTKIVATTHYSELKAYALKTENV 460

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
           ENA+ EF +ETLRPTYR+L G  G SNA  I+K +G    II+ A+K + +   E +   
Sbjct: 461 ENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLSDYIIEEARKGISKDTLEFE--- 517

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD---RRAAHLKAKETQQ 603
             +L Q+L     K E   R A  L  +      + E++   +     +A H   +E ++
Sbjct: 518 --DLIQNLQTRSVKAEENLRKAEFLKEQAEKFKEKYEEKVSSITETREKALHEGRREAKK 575

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
           + +E   AK + D +++D     R   + E    ++ES   +    + +  ++  ++SE 
Sbjct: 576 IIEE---AKSEADKILKDMREMERLGYSSEARQRLQESRQKLKE--KLNNAEESLNISER 630

Query: 664 NTSSF--TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           +      + + GE+V + SL  K   V+        V +Q G M++ VK  ++R   N  
Sbjct: 631 DQGEALKSVKEGEEVFIPSLNMK-GIVISTQDSKGEVGIQAGIMKINVKLKDLRKTNN-- 687

Query: 722 RKNAANPAPRLRKQV 736
                NP  +  K V
Sbjct: 688 -----NPISKKEKAV 697


>gi|282916393|ref|ZP_06324155.1| MutS2 protein [Staphylococcus aureus subsp. aureus D139]
 gi|283770204|ref|ZP_06343096.1| MutS2 protein [Staphylococcus aureus subsp. aureus H19]
 gi|282319833|gb|EFB50181.1| MutS2 protein [Staphylococcus aureus subsp. aureus D139]
 gi|283460351|gb|EFC07441.1| MutS2 protein [Staphylococcus aureus subsp. aureus H19]
          Length = 782

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 205/709 (28%), Positives = 355/709 (50%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  +++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNEEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|384867975|ref|YP_005748171.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|312438480|gb|ADQ77551.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 782

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 354/709 (49%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D + + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDKEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|384459066|ref|YP_005671486.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium acetobutylicum EA 2018]
 gi|325509755|gb|ADZ21391.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium acetobutylicum EA 2018]
          Length = 806

 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 225/735 (30%), Positives = 359/735 (48%), Gaps = 83/735 (11%)

Query: 12  PFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           P+G SL E ++ + +T  A  ++  +   P + +   D+   ++ A  G  L+P ++  V
Sbjct: 54  PYG-SLYEVKEHIEETKEAFELLMKKGAPPFEGAY--DVTEAVSMAEKGFSLAPGQLLKV 110

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
              LR      + ++   E +      Y  + ++      L  +E+ I F        I 
Sbjct: 111 GSMLRCARKFKEYISHKEEEES-----YRIIEDICSGIIPLKNIEDNI-FNAIIGEEEIS 164

Query: 129 DRASEDLELIRAERKRNMENLDSLLK-KVAAQIFQ-AGGIDKPLITKRRSRMCVGIKASH 186
           D+AS  L  IR    R++++ ++ +K KV A +   +  + + L T R  R  + +KA +
Sbjct: 165 DKASTALYSIR----RSLKDKNASIKDKVNAMMRSYSKYLQENLYTIRGERYVIPVKAEY 220

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           K  +P G+  + SS+GAT F+EP G V  NN    L   E AE   IL  L+A I KS  
Sbjct: 221 KAQVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIERILRELSALIYKSIV 279

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
            +K     V E+D  FA+A +A  ++   P      HV+    I+I   +HPL+      
Sbjct: 280 AVKNNEKIVTELDFIFAKAKYASSINATAP------HVNDKGVIDIVMGRHPLI------ 327

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                    +P K                     VP++I +  E   +VITGPNTGGKT 
Sbjct: 328 ---------DPAKV--------------------VPLNIYMGREFTSLVITGPNTGGKTV 358

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KT GL  +M+ +GL +PA+ +  + +F  + ADIGD QS+EQ+LSTFS H++ IV I+
Sbjct: 359 TLKTTGLLEVMAMSGLMIPARENSTISFFKEVYADIGDEQSIEQSLSTFSSHMTNIVRII 418

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           +    +SLVL DE+G+GTDP+EG ALA SIL+ LR R    V TTHY++L     K    
Sbjct: 419 DDADEDSLVLFDELGAGTDPTEGAALAISILEALRKRGTKIVATTHYSELKAYALKTENV 478

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
           ENA+ EF +ETLRPTYR+L G  G SNA  I+K +G    II+ A+K + +   E +   
Sbjct: 479 ENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLSDYIIEEARKGISKDTLEFE--- 535

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD---RRAAHLKAKETQQ 603
             +L Q+L     K E   R A  L  +      + E++   +     +A H   +E ++
Sbjct: 536 --DLIQNLQTRSVKAEENLRKAEFLKEQAEKFKEKYEEKVSSITETREKALHEGRREAKK 593

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
           + +E   AK + D +++D     R   + E    ++ES   +    + +  ++  ++SE 
Sbjct: 594 IIEE---AKSEADKILKDMREMERLGYSSEARQRLQESRQKLKE--KLNNAEESLNISER 648

Query: 664 NTSSF--TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           +      + + GE+V + SL  K   V+        V +Q G M++ VK  ++R   N  
Sbjct: 649 DQGEALKSVKEGEEVFIPSLNMK-GIVISTQDSKGEVGIQAGIMKINVKLKDLRKTNN-- 705

Query: 722 RKNAANPAPRLRKQV 736
                NP  +  K V
Sbjct: 706 -----NPISKKEKAV 715


>gi|295706821|ref|YP_003599896.1| DNA mismatch repair protein MutS [Bacillus megaterium DSM 319]
 gi|294804480|gb|ADF41546.1| DNA mismatch repair protein MutS [Bacillus megaterium DSM 319]
          Length = 787

 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 223/702 (31%), Positives = 350/702 (49%), Gaps = 96/702 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I D+   +  A  G  LS +E+  V  T+ A   V K+  E    D D LQ   P++
Sbjct: 65  LGGIFDVRPSVKRAEIGGTLSSNELLDVASTIYAARQV-KQFIEQVVEDED-LQL--PII 120

Query: 101 -ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
            E ++    L E+E+ I   ID     +LD AS+ L  IR + +    R  E L+SL++ 
Sbjct: 121 TEHIEKLMPLPEVEQTIKMSIDENG-TVLDGASDQLRGIRQKLRSTESRIREKLESLIRS 179

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
            +AQ   +  I    +T R  R  + +K  ++     GI  + SSSGAT F+EP+  V  
Sbjct: 180 SSAQKMLSDAI----VTIRNERFVIPVKQEYRSAY-GGIVHDQSSSGATLFIEPQAIVTL 234

Query: 216 NNMEVRLSNSEIAEETAI------LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 269
           NN    L  +++ E+  I      L++  AE+A   R+  YL+    E+D  FA+  ++ 
Sbjct: 235 NN---ELQEAKVKEKQEIERILIALTVQVAEVANELRQNVYLLG---ELDFMFAKGRYSH 288

Query: 270 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
            +    P ++ + ++    +      KHPL+                  + DV       
Sbjct: 289 ELKASKPKMNDRGYIKLVKA------KHPLIA-----------------QEDV------- 318

Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
                      V  DI++  +   +VITGPNTGGKT ++KTLGL +LM++AGL +PA + 
Sbjct: 319 -----------VANDIELGDQYTSIVITGPNTGGKTVTLKTLGLFTLMAQAGLQIPALDG 367

Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 449
             +  F  + ADIGD QS+EQ+LSTFS H+  IVDIL+ V  ESLVL DE+G+GTDP EG
Sbjct: 368 SEMAVFKHVFADIGDEQSIEQSLSTFSSHMVNIVDILQKVDHESLVLFDELGAGTDPQEG 427

Query: 450 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
            ALA SIL  + +R    V TTHY +L           NA+ EF +ETL PTY++L G  
Sbjct: 428 AALAISILDQVYERGARVVATTHYPELKAYGYNREGVVNASVEFDIETLSPTYKLLIGVP 487

Query: 510 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 569
           G SNA  I+K +G   ++I+RA+  +       + ++   +  SL + RR+ E +   A 
Sbjct: 488 GRSNAFEISKRLGLSAEVIERAKGYI-----GSETNKVENMIASLEDSRRQSEHELEEAE 542

Query: 570 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 629
            L  E   L++E++ +  + + +   L  K  ++ Q  +  A  + + ++ D    LR  
Sbjct: 543 ELRKEAQKLHKELQSQIIEFNEKRDKLYEKAEEKAQATVKAASEEAEKIISD----LRKM 598

Query: 630 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP----------QFGEQVHVK 679
           S    ++L+KE E     ++EA +  +D +V     S   P          Q G++V V 
Sbjct: 599 SQKN-HALVKEHE-----LIEARKRLED-AVPTLEKSKKKPAVPKKQERTLQAGDEVKVL 651

Query: 680 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           S G K  T+VE   +++   VQ G M+++VK+ ++  I + K
Sbjct: 652 SWGQK-GTLVERVSNNEW-QVQMGIMKMKVKEKDLEYISSPK 691


>gi|33860777|ref|NP_892338.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
           marinus subsp. pastoris str. CCMP1986]
 gi|33633719|emb|CAE18676.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
           marinus subsp. pastoris str. CCMP1986]
          Length = 803

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 215/728 (29%), Positives = 359/728 (49%), Gaps = 102/728 (14%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSA--ALAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
           MG   + +++IP     E S++LL +T     L     + +  S + DI+  +     G 
Sbjct: 41  MGENAILESEIP--TEYEISRRLLQETIEINELEKTLDKSISFSGVFDISKNIEICSKGG 98

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           +++ SE+  +  T+ A  ++ K L     LD ++    S  L  L + N   ++E+ +  
Sbjct: 99  VINSSELLEIAETISAAKDLKKIL-----LDFEARPFISSFLNRLIDHN---QIEKILKN 150

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK-------PLI 171
            I+    I  DRAS+ L  +R          D L KK   +I     I K        +I
Sbjct: 151 GIESNGRI-SDRASQKLANLRQ---------DLLSKKSERRILVDKFIQKNINYIQDTII 200

Query: 172 TKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN----MEVRLSNSEI 227
             R  R  V IK         GI  + S+SG T ++EP+  V   N    ME R++    
Sbjct: 201 GDRYGRPVVAIKVQFGEKFK-GIIHDSSASGNTIYLEPESIVFKGNKIASMEARVA---- 255

Query: 228 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
            EE  +L   +  ++ +++ +  + D +L  + A  R+ ++ W+ G  PI+ +      +
Sbjct: 256 GEEFKLLKEWSQIVSDNDKSLIEMSDILLRTEHALIRSRYSNWIGGNAPIVEN------N 309

Query: 288 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 347
             +N+ G  HPLL+  + +  +                              PV ID  +
Sbjct: 310 PIVNLIGFSHPLLIWENKKKEAPK----------------------------PVSIDFHI 341

Query: 348 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 407
              T+VV ITGPNTGGKT ++K LG+A LM+++GL++P+  +P +P+   I  DIGD QS
Sbjct: 342 NRNTKVVAITGPNTGGKTVALKGLGIALLMARSGLFIPSIKNPIIPFCPNIFVDIGDDQS 401

Query: 408 LEQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
           LE NLSTFSGHI RI +ILE ++ +   S+VL+DEIGSGTDPSEG ALA ++L+      
Sbjct: 402 LEGNLSTFSGHILRIRNILESLNNKKGLSVVLLDEIGSGTDPSEGTALAIALLKEFATLS 461

Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
            + + TTHY D+  LK  D RFEN +  F  E+ +P Y + WG  G SNAL+I++ IG D
Sbjct: 462 DITLATTHYGDIKALKYSDDRFENVSVAFDEESFKPRYTLNWGIPGRSNALSISRRIGID 521

Query: 525 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 584
            KI+  A      L+P+  ++  S + + L +ER K ++ A  AA L A    L+ EI+ 
Sbjct: 522 EKILNEAANY---LKPKEVENINS-IIKGLEDERIKQQNSAEEAAELIARTEILHDEIKS 577

Query: 585 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE---INSLIKES 641
             +     A  ++  E Q++ + +  AK ++  +++  ++Q  +A+ ++   I   +KE 
Sbjct: 578 NYEFQKNNAEKIQESEKQKLSKYIRAAKKEVINLIKKLKDQ--NANGEDSRLIGIRLKEI 635

Query: 642 ESAIAAIVEAHRPDDDFSVSETNTS---SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 698
           E                 +++TN +   S++P+ G+ + +KSL +    ++++     + 
Sbjct: 636 EKE--------------HLTQTNINKEISWSPKIGDFIKIKSL-NSTGQIIDIDRKARSF 680

Query: 699 LVQYGKMR 706
            V+ G  R
Sbjct: 681 EVKCGSFR 688


>gi|302672186|ref|YP_003832146.1| MutS2 family protein [Butyrivibrio proteoclasticus B316]
 gi|302396659|gb|ADL35564.1| MutS2 family protein [Butyrivibrio proteoclasticus B316]
          Length = 797

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 182/555 (32%), Positives = 280/555 (50%), Gaps = 64/555 (11%)

Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
           ++T R  R CV ++A +K  + +GI  + SSSG+T F+EP   VE NN    L   E AE
Sbjct: 187 VVTMRDDRYCVPVRAEYKSQI-NGIVHDQSSSGSTLFIEPAAVVELNNKIKELVLQENAE 245

Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
              IL  L+ ++ +    IKY  D + ++D  FA+A +A  ++ + P+ +     SFD  
Sbjct: 246 IEKILLELSLQVGEHAEAIKYNSDIMTDLDFVFAKASYALEINAISPVFNDNH--SFD-- 301

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
             I+  +HPL+             + N +                      VPID+    
Sbjct: 302 --IKKGRHPLI-------------DKNKV----------------------VPIDVYAGK 324

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
           +  +++ITGPNTGGKT ++KT+GL +LM +AGL +PA +   L  FD + ADIGD QS+E
Sbjct: 325 DFDMLIITGPNTGGKTVTLKTVGLLTLMGQAGLAIPAGDKSELSVFDEVYADIGDEQSIE 384

Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
           Q+LSTFS H++  V ILE     SL L DE+G+GTDP+EG ALA SIL  L +R    + 
Sbjct: 385 QSLSTFSSHMTNTVKILENADSNSLCLFDELGAGTDPTEGAALAISILNNLHERQVRTLA 444

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTHY++L          +NA+ EF +E+LRPTYR+L G  G SNA  I+  +G   +II 
Sbjct: 445 TTHYSELKIYALNTPGIQNASCEFDVESLRPTYRLLIGIPGKSNAFAISSKLGLSEEIIN 504

Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
            A+   E++  E ++    +L   L + R+ +E++    A    E+ +L  E+  +   L
Sbjct: 505 AAK---EQIGTEDKKFE--DLLSDLEKSRKTIENERLEIAQYKREVEELKAELASKTDKL 559

Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-------INSLIKESE 642
           D++   +  +  ++ +  L  AK   D  ++ F     +A+  +       +   I    
Sbjct: 560 DKQKEEILRQANEEARNILQEAKDLADETIRTFRKAGPNATMQDLERARTNVGQKISAKN 619

Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
            AI+A  EA       + S         + GE V + S+G +  T+   P  D  + VQ 
Sbjct: 620 KAISAKKEAA------NASHPILKESQLKLGESVKIVSMGLR-GTISSKPDKDGNLYVQC 672

Query: 703 GKMRVRVKKNNIRPI 717
           G MR    K NIR +
Sbjct: 673 GIMRT---KANIRDL 684


>gi|187776956|ref|ZP_02993429.1| hypothetical protein CLOSPO_00500 [Clostridium sporogenes ATCC
           15579]
 gi|187775615|gb|EDU39417.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium sporogenes ATCC 15579]
          Length = 788

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 190/563 (33%), Positives = 296/563 (52%), Gaps = 68/563 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           S+ E ++ L +T  A  ++ ++   P +   + DI   ++ A  G  L P ++  +   L
Sbjct: 39  SVYEVREHLQETKEAFKLLVTKGAPPFE--GVYDIRSGISLAEKGSTLLPGQLLKIAAVL 96

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
           R     +K+     E +    + Y  L ++ +    L ++EE+I   I+ +  I  DRAS
Sbjct: 97  RCARR-FKEYINYKEEE----ESYRVLEDICEGIFSLPKIEEEIFNAIEGEDEIA-DRAS 150

Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L  IR   +++N    + ++SL++  ++ +       + + T R  R  + +KA HK 
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G+  + SS+GAT F+EP   V  NN    L   E AE   ILS+L+A+I  +   +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILSVLSAKINANITGV 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           K   + V E+D  FA+A FA   +  CP ++ +  V       IEG KHPL         
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-KHPL--------- 308

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                        ++  E+             +PI +K+  E   ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------IPISVKLGEEFTSLMITGPNTGGKTVTL 342

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL  LM+ +GL +PA+ +  + +F+ + ADIGD QS+EQ+LSTFS H+  IV+I++ 
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
               SLVL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     +    EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGSKIIATTHYSELKAYALRKEGVEN 462

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETLRPTYR+L G  G SNA  I+K +G    II  A++ +       +  R  
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517

Query: 549 ELYQSLMEERRKLESQARTAASL 571
           EL Q+L E+  K +  AR A +L
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENL 540


>gi|424834848|ref|ZP_18259539.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium sporogenes PA 3679]
 gi|365978409|gb|EHN14489.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium sporogenes PA 3679]
          Length = 788

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 187/563 (33%), Positives = 292/563 (51%), Gaps = 68/563 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           S+ E ++ L +T  A  ++ ++   P +   + DI   ++ A  G  L P ++  +   L
Sbjct: 39  SVYEVREHLEETKEAFKLLVTKGAPPFE--GVYDIRSGISLAEKGSTLLPGQLLKIAAVL 96

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
           R      + +    E      + Y  L ++ +    L ++EE+I   I+ +  I  DRA+
Sbjct: 97  RCARRFKEYINHKEEE-----ENYRALEDICEGIFSLPKIEEEIFNAIEGEDEIA-DRAT 150

Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L  IR   +++N    + ++SL++  ++ +       + + T R  R  + +KA HK 
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G+  + SS+GAT F+EP   V  NN    L   E AE   ILS+L+++I  +   +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILSVLSSKINANITGV 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           K   + V E+D  FA+A FA   +  CP ++ +  V       IEG +HPL+    +   
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPLIDRRQV--- 314

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                                           VPI +K+  E   ++ITGPNTGGKT ++
Sbjct: 315 --------------------------------VPISVKLGDEFTSLMITGPNTGGKTVTL 342

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL  LM+ +GL +PA+ +  + +F+ + ADIGD QS+EQ+LSTFS H+  IVDI++ 
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVDIMDK 402

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
               SLVL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     +    EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGSKIIATTHYSELKAYALRKEGVEN 462

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETLRPTYR+L G  G SNA  I+K +G    II  A++ +       +  R  
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517

Query: 549 ELYQSLMEERRKLESQARTAASL 571
           EL Q+L E+  K +  AR A +L
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENL 540


>gi|260437715|ref|ZP_05791531.1| DNA mismatch repair protein MutS [Butyrivibrio crossotus DSM 2876]
 gi|292809738|gb|EFF68943.1| DNA mismatch repair protein MutS [Butyrivibrio crossotus DSM 2876]
          Length = 791

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 206/694 (29%), Positives = 338/694 (48%), Gaps = 75/694 (10%)

Query: 25  NQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
           + T+A+  +     L  S + DI  ++ S   G  L  SE+ +V   L    +  +  + 
Sbjct: 49  DTTAASSRIFAKGSLGFSGLTDIRPLIKSLEVGSSLGISELLSVAALLSVTGSAIRYDSN 108

Query: 85  AAELDGDSL-QRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 143
           + E + D L +R++ L       N L+++  +I  CI  +  I  D AS +L+ IR ++K
Sbjct: 109 SIETNTDVLSERFNML-------NPLSDILNEINRCIISETEI-ADDASTNLKDIRRQQK 160

Query: 144 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
              E + S L  + +  ++   +   ++T R  R CV +KA ++  +P G+  + S++G+
Sbjct: 161 NVNERIKSELSHMISGSYRTY-LQDAVVTTRDGRYCVPVKAEYRSQVP-GMIHDQSNTGS 218

Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
           T+F+EP   V+ NN    L   E  E + ILS L+A       E+    D + E+D  FA
Sbjct: 219 TFFIEPMSIVKLNNDLRELEIKESEEISVILSSLSAMAGNYTTELLTNYDILKELDFIFA 278

Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
           +AGF+    G  PI+        D  INI+  +HPL+  S +                  
Sbjct: 279 KAGFSHSYKGSEPIMDC------DGKINIKKGRHPLIDSSKV------------------ 314

Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
                            VP+DI +      ++ITGPNTGGKT ++KT+GL SLM ++GL+
Sbjct: 315 -----------------VPVDIYLGDGYEQLIITGPNTGGKTVTLKTIGLFSLMGQSGLH 357

Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
           +PA ++ +L  F+ I ADIGD QS+EQ+LSTFS H+  IV IL+     SLVL DE+ +G
Sbjct: 358 IPASDNSKLTVFNDIFADIGDEQSIEQSLSTFSSHMKNIVYILKKADSNSLVLFDELCAG 417

Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
           TDP+EG ALA SIL+ L  +    + TTHY++L          ENA  EF + +L PTYR
Sbjct: 418 TDPTEGAALAISILRTLHSKKITTIATTHYSELKIYALSTDGVENACCEFDVASLAPTYR 477

Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES 563
           +L G  G SNA  I+  +G   +II+ A+  +       +     ++   L + R  +E 
Sbjct: 478 LLIGIPGKSNAFAISGKLGLPSEIIENAKANIGTSAKAFE-----DVISDLEKSRVTIEK 532

Query: 564 QARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE 623
           +         EI +L   ++ + + LD ++  +  K  ++    L  AK   D  ++DF 
Sbjct: 533 EQAEIELYKKEIEELKNRLKIKTERLDEKSDSIIEKAREEADAILREAKETADETIRDFN 592

Query: 624 NQLRD--------ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 675
              ++        A  + I   ++++ +  A    A++P     V  +N ++     G++
Sbjct: 593 KAAKNGMTIQDLEAGRERIRKQLEKTNAKKA----ANKP-----VQTSNHTAADFHIGDK 643

Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
           VHV S+ D   TV  +P     + V  G +  +V
Sbjct: 644 VHVISM-DLDGTVHTLPDSKGFLTVSMGILNSKV 676


>gi|381183546|ref|ZP_09892273.1| recombination and DNA strand exchange inhibitor protein
           [Listeriaceae bacterium TTU M1-001]
 gi|380316562|gb|EIA19954.1| recombination and DNA strand exchange inhibitor protein
           [Listeriaceae bacterium TTU M1-001]
          Length = 784

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 225/720 (31%), Positives = 357/720 (49%), Gaps = 79/720 (10%)

Query: 16  SLEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           S +  QK+ ++T     +++   S P+  + + D+A  L     G  L+  EI  +   L
Sbjct: 39  SFDSIQKMQSETEEGAKIIRLKGSAPI--TGLSDVAPHLKRLEIGGDLNGLEIYQIGSNL 96

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           R V+ V K   +  E  G  L    PLL EL K    L +LEE+I   +D +   +LD A
Sbjct: 97  R-VSRVMKNFMDDLEEIGVEL----PLLFELTKEILVLKDLEEEINLTVD-EAGYMLDTA 150

Query: 132 SEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
           SE L  +R    R      E L+SLL+   A    A  +   +IT R  R  + +K  ++
Sbjct: 151 SETLRSVRQTLARTEGRVREKLESLLRDRNA----ATMLSDAIITIRNDRYVIPVKQEYR 206

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
                G+  + S+SG T F+EP+  V+ NN    L   E  E   IL+ ++A++A+  +E
Sbjct: 207 SHY-GGVIHDQSASGQTLFVEPQSVVDLNNERRALQAKENQEIERILAEMSAKLAEFIQE 265

Query: 248 IK---YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
           I    Y++ R    D   A+A F +    + P      H++ +    +   +HPLL    
Sbjct: 266 IHHNTYILGR---FDFILAKARFGKSQKAITP------HLNNEGVTKLYAARHPLL---- 312

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                           D EN                V  DI +      +VITGPNTGGK
Sbjct: 313 ----------------DPENV---------------VANDILLGDGYSTIVITGPNTGGK 341

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KTLGL ++M++AGL +PA+    +  ++ I ADIGD QS+EQ+LSTFS H++ IV 
Sbjct: 342 TITLKTLGLLTMMTQAGLQIPAQEESLVAIYEDIFADIGDEQSIEQSLSTFSSHMTNIVS 401

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           ILE +++ SLVL DE+G+GTDP EG ALA SIL  +  R    V TTHY +L        
Sbjct: 402 ILEKLNQNSLVLFDELGAGTDPQEGAALAISILDEVAKRGASVVATTHYPELKAYGYNRV 461

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
              NA+ EF++ETL PTY++L G  G SNA  I++ +G +  +I  A+ LV     + + 
Sbjct: 462 FATNASVEFNVETLSPTYKLLIGIPGRSNAFEISRRLGLNEGVIDEARALV-----DTES 516

Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 604
              +E+  SL E+R   E++ + A+ L  +   L R+++ E +    +   L  +  ++ 
Sbjct: 517 ADLNEMISSLEEKRNLAEAEYKEASELAKDADKLLRDLQKEIRTYYEQKDKLLERANEKA 576

Query: 605 QQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
            + +  A+ + DT++++  E QLR AS  + + LI +++S +A               + 
Sbjct: 577 SEVVTAAEEEADTIIRELRELQLRGASGVKEHELI-DAKSRLAGAKPKTIQKKVVHPVKK 635

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
               F  Q G+ V V SLG K   + +V G +    VQ G +++++K+ ++  I   K K
Sbjct: 636 VAHKF--QEGDGVRVLSLGQKGVLLDKVSGSEWN--VQIGIIKMKIKETDLEYIQPEKPK 691


>gi|168181815|ref|ZP_02616479.1| MutS2 family protein [Clostridium botulinum Bf]
 gi|237796578|ref|YP_002864130.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum Ba4 str. 657]
 gi|259511153|sp|C3KTI4.1|MUTS2_CLOB6 RecName: Full=MutS2 protein
 gi|182674997|gb|EDT86958.1| MutS2 family protein [Clostridium botulinum Bf]
 gi|229262891|gb|ACQ53924.1| MutS2 family protein [Clostridium botulinum Ba4 str. 657]
          Length = 788

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 188/563 (33%), Positives = 293/563 (52%), Gaps = 68/563 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           S+ E ++ L +T  A  ++ ++   P +   + DI   +  A  G  L P ++  +   L
Sbjct: 39  SVYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRNGIYLAEKGSALLPGQLLKIAAVL 96

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
           R      + +        +  + Y  L  + +    L ++EE+I   I+ +  I  DRAS
Sbjct: 97  RCARRFREYINHK-----EQEESYRVLENICEGIFSLPKIEEEIFNAIEGEDEI-ADRAS 150

Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L  IR   +++N    + ++SL++  ++ +       + + T RR R  + +KA HK 
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRRDRYVLPVKAEHKG 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL++L+A+I  +   +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           K   + V E+D  FA+A FA   +  CP ++ +  V       IEG +HPL         
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                        ++  E+             VPI +K+  E   ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL  LM+ +GL +PA+ +  + +F+ + ADIGD QS+EQ+LSTFS H+  IV+I++ 
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
               SLVL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     +    EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGAKIIATTHYSELKAYALRKEGVEN 462

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETLRPTYR+L G  G SNA  I+K +G    II  A++ +       +  R  
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517

Query: 549 ELYQSLMEERRKLESQARTAASL 571
           EL Q+L E+  K +  AR A +L
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENL 540


>gi|317129869|ref|YP_004096151.1| MutS2 family protein [Bacillus cellulosilyticus DSM 2522]
 gi|315474817|gb|ADU31420.1| MutS2 family protein [Bacillus cellulosilyticus DSM 2522]
          Length = 788

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 220/717 (30%), Positives = 349/717 (48%), Gaps = 77/717 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           +E +QK   + +  L +    PL    I DI   +  A  G  L+  E+  V  T+   +
Sbjct: 43  IEHAQKSTYEGAKVLRLKGQAPL--GGIRDIRASVKRAKIGGALNEIELLDVSSTIYG-S 99

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
             +K   EA   D   L   + + EL +N   LT++E  I   ID    + LD AS  L 
Sbjct: 100 RRFKSFVEAMIEDEVEL---TIIPELAENIVPLTDVERDIKQAIDENGEV-LDSASPALR 155

Query: 137 LIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
            +R ++ R+ E+     L+S+ +  + +   + GI    IT R  R  + +K  ++    
Sbjct: 156 TLR-QQIRSYESSVRSKLESITRSSSGRKMLSDGI----ITIRNDRYVIPVKQEYRGHF- 209

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNM--EVRLS-NSEIAEETAILSLLTAEIAKSEREI 248
            G+  + S+SGAT F+EP   VE NN   E R+    EI+     LS+L +E+A+   E+
Sbjct: 210 GGMVHDQSASGATLFIEPSSVVEINNQLREARMKEKQEISRILLALSVLVSEVAE---EL 266

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
             +++ + EID  FA+A ++  + G  P L+       D  I++   +HPL+        
Sbjct: 267 LTIVEVMSEIDFIFAKALYSLEIGGTQPKLNE------DGYIHMAKARHPLI-------- 312

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                                        D  VPIDI++  E   +VITGPNTGGKT ++
Sbjct: 313 ---------------------------AKDEIVPIDIEIGKEYSSLVITGPNTGGKTVTL 345

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL +LM ++GL +P +       F  I ADIGD QS+EQ+LSTFS H++ IVDIL+ 
Sbjct: 346 KTVGLLTLMVQSGLQIPCEEGSSAAVFQHIFADIGDEQSIEQSLSTFSSHMTNIVDILKH 405

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
           V   SLVL DE+G+GTDP+EG ALA SIL Y+ +     + TTHY++L           N
Sbjct: 406 VDHRSLVLFDELGAGTDPTEGAALAISILDYVYNVGAKVIATTHYSELKGYAYNREGVMN 465

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETLRPTYR+L G  G SNA  I++ +G    II+ A+  +         ++  
Sbjct: 466 ASVEFDVETLRPTYRLLIGVPGRSNAFAISRRLGLSDTIIEDAKSHI-----TADTNKIE 520

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
            +  SL   R+  E +   +  L  E   L++++E E + L      +  +  ++ +Q L
Sbjct: 521 NMIASLESSRKNAEREMEESELLRKEAEQLHQQLEKEFEKLQMEREKILQQAEEKAEQSL 580

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETNT 665
           N A  + + ++ +     R     + + LI   K  E A   +V     +   + S +  
Sbjct: 581 NKATAEAEKIISELREIQRSNPQIKDHQLIEAKKRLEEAKPHLVNKKSNEKPKTSSNSKK 640

Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
               P  G++V V S   K   V +V  +D    VQ G M+++VK ++I+ + + K+
Sbjct: 641 KKLIP--GDEVKVLSFDQKGHIVEQV--NDKEYFVQLGMMKMKVKADDIQYMSSPKQ 693


>gi|126652668|ref|ZP_01724829.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. B14905]
 gi|126590517|gb|EAZ84635.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. B14905]
          Length = 788

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 214/715 (29%), Positives = 345/715 (48%), Gaps = 82/715 (11%)

Query: 22  KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           +LL +    L++++ +  + +  I D+      A  G +L+  E+  +  T+RA + + +
Sbjct: 46  QLLEEMDEGLSILRVKGNVPMGGIFDVRPSARRAQIGGMLAAIELMEISSTIRA-SRILR 104

Query: 81  KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR- 139
              E  +L+ D +      +   +    LT L+ +I  CID     +LD AS  L  IR 
Sbjct: 105 NFIE--DLEADEVIEIPHFIAKKETMPVLTGLQHEINNCIDDNG-AVLDSASTTLRTIRQ 161

Query: 140 ---AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
              +E  +    L+SL++   A       +   L+T R  R  + +K  +++    GI  
Sbjct: 162 SLRSEEAKVRSKLESLIRGSNASKM----LSDTLVTIRNDRFVIPVKQEYRHHY-GGIVH 216

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + SSSG T F+EP   V+ NN   RL   E AE   IL  L+A +     ++  L+  + 
Sbjct: 217 DQSSSGQTLFIEPDSIVQANNEIHRLKMKEQAEVERILLALSAMVQDVAPDLFNLVKVLG 276

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           +ID+  A+  + Q      P ++       D  I +   +HPLL                
Sbjct: 277 DIDVILAKGKYGQANKCTMPKMNQ------DGYIRLVRARHPLL---------------- 314

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
           P+                   D  VP DI+   +   +VITGPNTGGKT ++KT+GL +L
Sbjct: 315 PI-------------------DTAVPNDIEFGKDITAIVITGPNTGGKTVTLKTVGLCTL 355

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++AGL +PA +  +L  F  + ADIGD QS+EQ+LSTFS H+  IVDIL+    ESLVL
Sbjct: 356 MAQAGLPVPALDGSQLAVFKQLFADIGDEQSIEQSLSTFSSHMVNIVDILQKFDDESLVL 415

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA SIL  +  R    + TTHY +L           NA+ EF +E
Sbjct: 416 FDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVANASVEFDIE 475

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TL PTYR+L G  G SNA  I+  +G    II+RA+      R     H    +  SL E
Sbjct: 476 TLSPTYRLLIGVPGRSNAFEISSRLGLPETIIERAKGFTGTDR-----HEVESMIASLEE 530

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
            RR+ E  A  + +L  E   L +E++D+ +  D R   L  K  ++ ++ +  AK + +
Sbjct: 531 TRRQSEDDAERSHALLLESESLRKELQDKLQAYDERKEALDKKAKEKARKIVEEAKHEAE 590

Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR------PDDDFSV----SETNTS 666
            ++ +     ++A     + ++KE E     ++EA +      P D+  V    ++    
Sbjct: 591 GIIAELREMRKNA-----DQVVKEHE-----LIEARKRLEEATPLDNNKVLKKAAQVKAR 640

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           +     G++V V S G +  T++E   + + V VQ G +++++  +++  I   K
Sbjct: 641 AQNLVVGDEVKVLSYGQR-GTLLEKVSNTEWV-VQMGILKMKISDSDLEYIKPEK 693


>gi|373116161|ref|ZP_09530317.1| MutS2 family protein [Lachnospiraceae bacterium 7_1_58FAA]
 gi|371669625|gb|EHO34724.1| MutS2 family protein [Lachnospiraceae bacterium 7_1_58FAA]
          Length = 789

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 216/732 (29%), Positives = 361/732 (49%), Gaps = 79/732 (10%)

Query: 18  EESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           ++ Q+ L++TSAA+ M  ++  P   S ++ +A  L  A  G  L+  E+  +   LRA 
Sbjct: 44  DDVQRALDETSAAVDMSALRGSP-SFSGVKPVAASLQRAHMGGALNTRELLDIAAVLRAA 102

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
            +  +         G+  +R    ++ L ++      LE+KI   I  +  I  D AS +
Sbjct: 103 RSAREY--------GEGDERKKTCIDHLFRSLTANRFLEDKITGSIVGEDEIA-DAASPE 153

Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
           L  IR   +     +  +L K+ +   QA  + + +IT+R  R  V +K+ HK  +P G+
Sbjct: 154 LASIRRHIRATASKVRDILNKLLSS-NQAKYLQEAIITQRNDRFVVPVKSEHKNDVP-GL 211

Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
             +VSSSGAT+F+EP G V+ NN    L   E  E   IL+ L+AE A+ + +I    D 
Sbjct: 212 VHDVSSSGATFFIEPMGVVKANNELKELQAREEKEIERILAELSAECAQFKDDITQDYDL 271

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
           ++ +D+ FARA  A  M    P +        +  + +   +HPLL              
Sbjct: 272 LILLDVIFARAKLAYRMRACAPRI-------VERGLYLRKARHPLL-------------- 310

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
            +P                    D  V  D+ +  +   +VITGPNTGGKT ++KT+GL 
Sbjct: 311 -DP--------------------DRAVANDLMLGEDFDTLVITGPNTGGKTVTIKTIGLL 349

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
           +LM++ GL++P  +  R+  F  +LAD+GD QS+ Q+LSTFS H+  IV IL     E+L
Sbjct: 350 TLMAQCGLHIPVSDDSRVKVFRRVLADVGDEQSIAQSLSTFSSHMVNIVGILGEADDETL 409

Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
           +L DE+G+GTDP EG ALA +I++  R+   L   TTHYA+L          ENA+ EF+
Sbjct: 410 ILFDELGAGTDPIEGAALAAAIIESAREMGALVAATTHYAELKVYAMTTPGVENASCEFN 469

Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
           +++L PTYR+L G  G SNA  I++ +G  + IIQ+A       R + +  R  ++   L
Sbjct: 470 VDSLAPTYRLLIGIPGKSNAFAISERLGLPKSIIQKAAA-----RIDAENVRFEDVLTQL 524

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL---KAKETQQVQQE---- 607
            E+R+++E +   AA L        RE+E+ AK      A +   +AK  ++ Q E    
Sbjct: 525 DEQRQEMEREKEAAARLR-------REMEETAKASREYKAKMEAERAKAVEKAQAEARAI 577

Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSETNTS 666
           L+ A+   D V ++  +  R    +E    + +  +A+  ++ EA               
Sbjct: 578 LDEARDTADQVFKELNDMRRRQRKEEDWQRVNDERAALRRSLNEAEGKLGARPEEPAPPP 637

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
           +   + G+ V +  +G + ATV+ V   D ++ +Q G +++  ++  +R +    +++A 
Sbjct: 638 TRPARAGDTVELVKMGTQ-ATVLSV-NKDGSLQLQAGILKITARQEEVRVVEGETQQSAK 695

Query: 727 NPAPRLRKQVCT 738
               R   ++ T
Sbjct: 696 KVVARAEHKLRT 707


>gi|416124432|ref|ZP_11595428.1| mutS2 protein [Staphylococcus epidermidis FRI909]
 gi|319401542|gb|EFV89752.1| mutS2 protein [Staphylococcus epidermidis FRI909]
          Length = 782

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 213/682 (31%), Positives = 340/682 (49%), Gaps = 83/682 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ +E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  ++ +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P          D +I +    HPLL            +N+     DVE            
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF +ETL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM---EERRKLESQARTAASLH 572
           +I+K +G    II +A+ ++     E     +S L Q+L    ++R +L+   R A   H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIES-LEQNLKRVDQQRIELDRLVREAQQTH 552

Query: 573 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 632
             +   Y++ ++  K L   A   K K  Q+V+     A  + D ++++  N LRD    
Sbjct: 553 DALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRDYKGA 604

Query: 633 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLAT 687
           E    +KE E     I +  + DD + V          ++     G++V V S G K   
Sbjct: 605 E----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQK-GE 655

Query: 688 VVEVPGDDDTVLVQYGKMRVRV 709
           V+E+ GD++ V VQ G +++++
Sbjct: 656 VLELVGDEEAV-VQMGIIKMKL 676


>gi|157412576|ref|YP_001483442.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
           marinus str. MIT 9215]
 gi|157387151|gb|ABV49856.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
           marinus str. MIT 9215]
          Length = 810

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 223/743 (30%), Positives = 355/743 (47%), Gaps = 98/743 (13%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
           MG   +    IP     E S++LLN+T     +  +  + +  S + DI+  +     G 
Sbjct: 48  MGKRAILGFGIP--SEYELSKRLLNETVEINELENNLDKSISFSNVFDISRNIEICSKGG 105

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
           ++S SE+  + +T+ A  N+ K       LD +     S   + LL + N  T    K G
Sbjct: 106 VISSSELLEIAKTIAAARNLKKIF-----LDFEQRPYISSFTKNLLDHQNVETIF--KRG 158

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
              + +   I D AS +L ++R E          L KK+  +I     I K L       
Sbjct: 159 IESNGR---ISDNASNELSVLRKEL---------LSKKLERKILVEKFIQKNLAYLQDTT 206

Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
           I  R  R  + +K ++  +   GI  + SSSG T + EP+  V   N    L     AEE
Sbjct: 207 IGDRNGRPVLAVKVNY-VIKFKGIIHDSSSSGNTVYFEPESVVTKGNKIASLEARITAEE 265

Query: 231 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI 290
             +L   +  ++ +   +  +   +L ++ A  R+ +++W+ G  P       +S     
Sbjct: 266 FKLLKKWSQIVSDNSENLIEMASILLRLENALTRSRYSKWIGGKTPTFEKNPIIS----- 320

Query: 291 NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECE 350
            + G  HPLL+    +  +                              PV +D  +   
Sbjct: 321 -LVGFSHPLLIWEHKKKGAPP----------------------------PVAVDFHINRN 351

Query: 351 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 410
            +VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+   I  DIGD+QSLE+
Sbjct: 352 IKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSLEE 411

Query: 411 NLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
           NLSTFSGHISRI +IL+ ++ +   S+VL+DEIGSGTDP EG ALA ++L+   ++  + 
Sbjct: 412 NLSTFSGHISRIKEILDSLNNKRGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSDIT 471

Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
           + TTHY D+  LK  D+RFEN +  F  ++L+P Y + WG  G SNAL+I+K IG D  I
Sbjct: 472 LATTHYGDIKALKYTDSRFENVSVVFDEDSLKPKYILNWGIPGRSNALSISKRIGLDENI 531

Query: 528 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
           +  A      LRP ++    +E+ + L EER K ++ A  AA L A    L+ E++   +
Sbjct: 532 LNEAANY---LRP-KEVDNINEIIKGLEEERIKQQNSAEAAAELIARTEILHDELKRNYE 587

Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLIKESE 642
                A  ++  E  ++ + +  AK ++  +++    +LRD + +      I   +KE E
Sbjct: 588 YQKINAEKIQEIERSKLSKHIVSAKKEVIDLIK----KLRDKNVNGEDTRIIGKRLKEIE 643

Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
           +        H     F  S     S+ PQ G+ V +KSL +    +V++        V+ 
Sbjct: 644 T-------EHLIQKKFKKS----ISWDPQVGDFVKIKSL-NSTGQIVDLDKKGGFYEVKC 691

Query: 703 GKMRVRVKKNNIRPI----PNSK 721
           G  R  +  N+   I    PN K
Sbjct: 692 GSFRSTLSVNDFEGINGEKPNFK 714


>gi|196250214|ref|ZP_03148908.1| MutS2 family protein [Geobacillus sp. G11MC16]
 gi|196210398|gb|EDY05163.1| MutS2 family protein [Geobacillus sp. G11MC16]
          Length = 641

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 199/618 (32%), Positives = 307/618 (49%), Gaps = 69/618 (11%)

Query: 17  LEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
           L+E    L +T  A A+++ +   PLD   + DI   L  A  G +LSP E+  V  T  
Sbjct: 40  LDEVAVWLEETDEAAAVLRLRGYVPLD--GVVDIRSHLKRAAIGGVLSPIELLEVAATA- 96

Query: 74  AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
           A +   K+L  +   +   L R +   + L     +  LEE I   ID    + LD AS+
Sbjct: 97  AASRQMKQLIMSLHDEHGGLARLADYADELAE---VPALEEDIRRSIDDHGEV-LDTASD 152

Query: 134 DLE----LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L      IRA   R  E L+S+++  +AQ      +   +IT R  R  + +K  ++  
Sbjct: 153 RLRSLRGQIRAAEARIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYRSA 208

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
              GI  + S+SGAT F+EP+  VE NN        E  E   IL  L+A++A+ +  +K
Sbjct: 209 Y-GGIVHDQSASGATLFIEPQVVVELNNALREARAKEKQEIERILRELSAKVAEHDEPLK 267

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
             ++ +   D  FA+A +A+ +    P ++++ ++ F  +      +HPL+         
Sbjct: 268 RAVEALAHFDFLFAKAKYARRLQAAKPAVNNRGYLRFLQA------RHPLI--------- 312

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                                       D  VP DI +  +   +VITGPNTGGKT ++K
Sbjct: 313 --------------------------DQDKAVPNDIVLGGDYTTIVITGPNTGGKTVTLK 346

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+GL ++M++AGL++PA +      F  + ADIGD QS+EQ+LSTFS H+  IVDIL  V
Sbjct: 347 TVGLLTIMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILRHV 406

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
             ESLVL DE+G+GTDP EG ALA +IL  +  R    V TTHY +L           NA
Sbjct: 407 DEESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVVNA 466

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF  ETLRPTY++L G  G SNA +I++ +G D +II+RA     +++   + H    
Sbjct: 467 SVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERA-----KVQVSAESHSVEN 521

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
           +  SL   +++ E     A S   E   L  E E + ++L+ + A   A+  Q+    + 
Sbjct: 522 MIASLERSKKQAEEDEARAHSAREEAERLRAEWEQKLEELEDKKAEQLAEAAQKATDIIR 581

Query: 610 FAKVQIDTVVQDFENQLR 627
            A+ + + ++    N+LR
Sbjct: 582 AAEREAERII----NELR 595


>gi|239827968|ref|YP_002950592.1| recombination and DNA strand exchange inhibitor protein
           [Geobacillus sp. WCH70]
 gi|259511159|sp|C5D5Q8.1|MUTS2_GEOSW RecName: Full=MutS2 protein
 gi|239808261|gb|ACS25326.1| MutS2 family protein [Geobacillus sp. WCH70]
          Length = 784

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 177/516 (34%), Positives = 265/516 (51%), Gaps = 57/516 (11%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           Q+  ++  AAL +    PL    I DI   L  A  G  LSP E+  +  T+ A     +
Sbjct: 47  QEETDEAVAALRLRGHVPL--GGIFDIRASLKRAKIGGTLSPHELLDIASTISAS----R 100

Query: 81  KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
           +L +  E   +  + +  L    +    L E+++ I  CID    + +D ASE L  IR 
Sbjct: 101 QLKQFIESLHEEKEEFPHLAGYAEKLAALPEVQQAIERCIDDHGEV-MDHASERLRSIRQ 159

Query: 141 ERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
           + +    R  E L+++++  +AQ   +  I    IT R  R  + +K  ++ +   GI  
Sbjct: 160 QLRTTEARVREKLENIIRSQSAQKMLSDAI----ITIRNDRYVIPVKQEYRGVY-GGIVH 214

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP+  VE NN        E  E   IL+ LT+ +A+    +   +D + 
Sbjct: 215 DQSASGATLFIEPQAVVELNNQLQEARVKEKREIERILTELTSIVAEHAEALLENVDILA 274

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           ++D  FA+A +A  +    P+++ + ++    +      +HPL+                
Sbjct: 275 QLDFIFAKAKYANKLKATKPVMNDRGYIRLLQA------RHPLI---------------- 312

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                                D  VP DI++  +   +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 -------------------DQDVVVPNDIELGKDYTTIVITGPNTGGKTVTLKTIGLLTL 353

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++AGL++PA +   L  F  + ADIGD QS+EQ+LSTFS H+  IVDIL  V  ESLVL
Sbjct: 354 MAQAGLFIPALDGSELAVFRSVYADIGDEQSIEQSLSTFSSHMVNIVDILRNVDHESLVL 413

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA +IL  +  R    V TTHY +L           NA+ EF  E
Sbjct: 414 FDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRDGVINASVEFDTE 473

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
           TLRPTY++L G  G SNA  I+K +G D +II+RA+
Sbjct: 474 TLRPTYKLLIGIPGRSNAFEISKRLGLDERIIERAK 509


>gi|291527503|emb|CBK93089.1| MutS2 family protein [Eubacterium rectale M104/1]
          Length = 792

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 206/674 (30%), Positives = 323/674 (47%), Gaps = 72/674 (10%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDG--DSLQRYSPLLELL 103
           DI G LN+    +LL    +  V + ++A         +   L G    ++  S L + +
Sbjct: 79  DIGGALNTT---ELLRICSLLEVAKRVKAYGRSAMDNEKQDSLSGLFAGIEPVSALCDEI 135

Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
           K C  L+E E             I D AS +L  IR   +   + + + L K+       
Sbjct: 136 KRC-ILSEEE-------------IADDASPELFKIRKSIRGMNDRIHAQLTKLMNNSTTR 181

Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
             +   ++T R  R C+ +KA  K  +P G+  + SS+G+T F+EP   V  NN    L 
Sbjct: 182 TYLQDAVVTMRDGRYCLPVKAEAKGNVP-GMMHDQSSTGSTLFIEPMAVVNLNNELKELF 240

Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
             E  E   IL+ L+ ++A +   ++   + + E+D  FA+A  A+  +GV P  ++  H
Sbjct: 241 IKEQEEIEKILAALSDKVAMNAAALEQDYEILSELDFIFAKANLAKSYNGVAPDFNTDGH 300

Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
                 INI   +HPLL    +                                   VPI
Sbjct: 301 ------INIRKGRHPLLDAKKV-----------------------------------VPI 319

Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
           D+++  E + ++ITGPNTGGKT S+KT+GL +LM +AGL++PA +  +L  F+ + ADIG
Sbjct: 320 DVRLGEEYKQLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAADRSKLAIFEDVFADIG 379

Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
           D QS+EQ+LSTFS H++ IV ILE     SL L DE+ SGTDP+EG ALA SIL  L   
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVKILEKADDRSLCLFDELCSGTDPTEGAALAISILNRLHQY 439

Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
             + + TTHY++L          ENA  EF++ETL PTYR+L G  G SNA  I+  +G 
Sbjct: 440 GAITMATTHYSELKVYALSTDGVENACCEFNVETLSPTYRLLIGIPGKSNAFAISSKLGL 499

Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 583
           D  II+ A+      R         +L  SL  +R+ +E +     S  AEI  L +++E
Sbjct: 500 DENIIEDAKS-----RINDNDLDFEDLIASLESQRQTIEKEQLEINSYKAEIEKLKKQLE 554

Query: 584 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 643
           ++ + +D+    +  +  ++  + L  AK   D  +++F N+     A  ++ + KE  +
Sbjct: 555 EKNERIDKSKDKILREANEEAYKILQDAKELADKTIRNF-NKYGQGQA-PMSQMEKERSA 612

Query: 644 AIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
               + +  +   D   +    +   P+    G+ V V SL  K  TV  +P     + V
Sbjct: 613 LRDKMNDKEKKLSDIKKNTAKANHKAPKKLRIGDSVLVLSLNLK-GTVHTLPNAKGDLYV 671

Query: 701 QYGKMRVRVKKNNI 714
           Q G +R  V  N++
Sbjct: 672 QMGILRSLVNINDL 685


>gi|406669612|ref|ZP_11076880.1| MutS2 family protein [Facklamia ignava CCUG 37419]
 gi|405582954|gb|EKB56928.1| MutS2 family protein [Facklamia ignava CCUG 37419]
          Length = 786

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 210/719 (29%), Positives = 353/719 (49%), Gaps = 64/719 (8%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQ 58
           MGH  V   Q+P  K  E  Q+LL++T   + ++ S P  L +  I ++   +     G 
Sbjct: 27  MGHQFVSD-QLPQTKQ-ETIQRLLDETEEVVRIL-SLPATLPIPRISNVRESIKRVEIGA 83

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
            L+  E+  + + L   + + +  ++  E +    Q +  L E ++    L E+E++I  
Sbjct: 84  RLNGKELAELGKLLSTTSQLVRFFSQLEENN----QFFPQLNEWVQKIVSLPEIEQRIDQ 139

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
            +D    IILD AS +L  IR  + R  +++   L  +     +A  +   LIT R  R 
Sbjct: 140 TVDSDG-IILDTASSELNRIRRAQLRTEQSIRETLNTIIKS--KANLLSDTLITIRNQRY 196

Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
            + +K  ++     G   + SS+G T F+EP+     NN    L + E  E   IL  +T
Sbjct: 197 VIPVKTDYRAQF-KGTVYDQSSTGQTLFIEPQSVTNLNNQLAALRSEEKVEVDRILDEVT 255

Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
            ++     EI      +  +D   ARA ++  ++G  P LS +  V       I   +HP
Sbjct: 256 EQLLPYLSEINQNHYALGYLDYVQARAEYSLAIEGTKPTLSPEREV------RIWQARHP 309

Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
           L+               +P K  V N                   DI +  + + ++ITG
Sbjct: 310 LI---------------DP-KQIVAN-------------------DILIGGDYQSLIITG 334

Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
           PNTGGKT  +KTLG+  +M ++GLY+PA+   ++  FD + ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTILLKTLGMLQIMGQSGLYIPAEEASQIGIFDQVYADIGDEQSIEQNLSTFSSH 394

Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
           ++ IV I++  + +SL+L+DE+GSGTDP EG ALA +IL Y +    + + TTHY +L  
Sbjct: 395 MTNIVSIIQRATYQSLILLDELGSGTDPQEGAALAMAILDYFQSVGSIVLATTHYPELKV 454

Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
             +     +NA+ EF+ +TL PTYR+L G  G SNAL I+K +G    II++AQ  V++ 
Sbjct: 455 YANHAANTQNASMEFNDQTLSPTYRLLIGIPGRSNALEISKRLGLRSDIIEKAQSGVQQ- 513

Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
             E QQ   +++   L +ERR++E + +       +   L   ++DE +        L A
Sbjct: 514 --ESQQ--LNDMVMQLDQERREMEEEHQQTQRYLDDAQTLLDRLKDEYQQWLNAKEDLMA 569

Query: 599 KETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINS-LIKESESAIAAIVEAHRPDD 656
           +  ++  Q +   K + + ++ D  + QL  +S   I      E++  +  + E  R   
Sbjct: 570 QAKREANQYIEAKKEEAEKIISDIRDLQLEQSSQQPIKEHTFIENKKRLGDLTEPERLKK 629

Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           +  V +        + G++V V +   +  T+VE+P   + + VQ G M+++V  + ++
Sbjct: 630 N-KVLQRAKKQQRIEVGDEVEVLAYQQR-GTIVEIPSSKEYI-VQMGVMKMKVAASEVK 685


>gi|320162401|ref|YP_004175626.1| MutS2 family protein [Anaerolinea thermophila UNI-1]
 gi|319996255|dbj|BAJ65026.1| MutS2 family protein [Anaerolinea thermophila UNI-1]
          Length = 808

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 226/740 (30%), Positives = 361/740 (48%), Gaps = 103/740 (13%)

Query: 15  KSLEESQKLLNQTSAA-LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
           + LEE+Q+L   TS A L +  +  + +    DI  ++  A    +L P+E+ A++ TL 
Sbjct: 38  RRLEEAQRLQKITSEARLLLSLNSEIGVGGASDIRPLVERAARHGVLEPAELLAIKDTLI 97

Query: 74  AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI-----IL 128
           +   + +           SL+R      LL        L    G       ++     IL
Sbjct: 98  SARTIAR-----------SLERKESTFPLL--AEIAAPLVPPPGLIETISRVVSERGEIL 144

Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
           D ASE L  +R E K   E L + L+ +      A  +   LIT+R  R  + ++A  K 
Sbjct: 145 DSASETLARLRREVKVAFERLMTRLEHMVNDPRIAPMLQDSLITQRNGRYVIPLRAEFKG 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNN----MEVRLSNSEIAEETAILSLLTAEIAKS 244
            +   I  + SSSGAT F+EP   V+ NN    +++R+ +    EE  IL+ L+ ++   
Sbjct: 205 QV-RSIIHDQSSSGATLFVEPLAVVDLNNEWHELQLRVRD----EERRILAELSDQVGAH 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              +  L + +   D A A A +A+ +    P+L    H +           HP   GS+
Sbjct: 260 FEALAALTEALARFDFALACAKYAEDLRASEPVLVRYRHPARPD--------HP---GST 308

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
           +R + A     +P          TV           VPID+ ++ +T  VVITGPNTGGK
Sbjct: 309 IRLIQARHPLLDP---------QTV-----------VPIDVDLDEDTFCVVITGPNTGGK 348

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KT+GL +LM+++GL++PA++   L  F+ + ADIGD QS+EQ+LSTFSGHI  I  
Sbjct: 349 TVTLKTVGLLALMAQSGLHIPARSGSELSVFENVFADIGDEQSIEQSLSTFSGHIKNISR 408

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           IL   +  +LVL DE+G+GTDP EG ALA +IL ++ ++    ++ THY +L        
Sbjct: 409 ILRRANTHTLVLFDELGAGTDPQEGAALARAILAHMVEKRIPCLIATHYPELKIFAHNTP 468

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE- 541
              NA+ EF L TLRPTY +  G  G SNAL IA  +G D  II++A+  +  E LR E 
Sbjct: 469 GVINASMEFDLNTLRPTYHLTLGLPGRSNALAIASRLGLDPVIIEKARAEISPEELRAEN 528

Query: 542 ------RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
                 RQ+       +   +E+R++E        L AE+     +IE+E + L  +   
Sbjct: 529 LLNEIHRQRDAARRARERAEKEQREVE-------RLRAELAARLEKIEEERQRLLEKVRE 581

Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFE--NQLRDASADEINSLIKESESAIAAIVEAHR 653
              +E + +++E+   + Q+    Q  E    LR+ S     +L++ + +A+        
Sbjct: 582 EAEQEAEALRREVEEVRRQLMRARQPLEALQPLREKS----EALVENARTAL-------- 629

Query: 654 PDDDFSVSETNTSSFTPQF----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
                S      ++  PQ     G++V V+SLG  +  V+   G++D   VQ G +RVR 
Sbjct: 630 ----VSTPAAGETTLPPQHPFRAGDKVRVRSLG--MQGVITALGEEDAE-VQVGNLRVRA 682

Query: 710 KKNNIRPIPNSKRKNAANPA 729
           + ++++      +K+AA PA
Sbjct: 683 RLSDLQ---KPGQKDAAEPA 699


>gi|347752968|ref|YP_004860533.1| MutS2 family protein [Bacillus coagulans 36D1]
 gi|347585486|gb|AEP01753.1| MutS2 family protein [Bacillus coagulans 36D1]
          Length = 784

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 223/718 (31%), Positives = 353/718 (49%), Gaps = 77/718 (10%)

Query: 16  SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           S EE  ++  +T  A  +++ +  + L  I DI   L  A  G  L+P E+  +  T+  
Sbjct: 39  SYEEVVRMQEETDEAAQVLRLKGHVPLFGIYDIRRHLKRAAIGGRLNPQELVQIASTIH- 97

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
           V+   K+  E    +   L    P+L  ++     LT LE +I   +D    I LD ASE
Sbjct: 98  VSRTMKRFIEGITEEETEL----PILTSMVDRIAVLTPLEHEIRNAVDENGEI-LDSASE 152

Query: 134 DLELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
            L  IR       +R  E L+  ++ K AA++     +   +IT R  R C+ +K  ++ 
Sbjct: 153 TLRQIRHGLRGTERRIREKLEGYIRGKNAAKM-----LSDAIITIRNDRYCIPVKQEYRA 207

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
               GI  + SSSG T F+EP+  V+ NN        E  E   ILS L+A +A +  E+
Sbjct: 208 NY-GGIVHDQSSSGQTLFIEPQSVVDLNNQLREWHLKEQQEVERILSELSAAVAAAGGEL 266

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           + +++ + + D  FA+A + + + G  P++++        +I +   +HPLL        
Sbjct: 267 ETIVEILADFDFMFAKALYGRSIKGSKPVINNHG------AIRMFKARHPLL-------- 312

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                   P                   +D  VP DI +  E   +VITGPNTGGKT ++
Sbjct: 313 --------P-------------------ADKVVPNDITIGQEYTTIVITGPNTGGKTITL 345

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL +LM++AGL +PA +   +  F  + ADIGD QS+EQ+LSTFS H++ IV+IL+ 
Sbjct: 346 KTIGLCTLMAQAGLQIPALDGSEMAVFKEVFADIGDEQSIEQSLSTFSSHMTNIVEILKR 405

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
           V  +SLVL DE+G+GTDP EG ALA SIL  +  R    V TTHY +L           N
Sbjct: 406 VDDQSLVLFDELGAGTDPQEGAALAISILDEVYKREARVVATTHYPELKAYAYNREGVVN 465

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETL PTYR+L G  G SNA  I++ +G    II+ AQ L+     E +     
Sbjct: 466 ASVEFDVETLSPTYRLLIGVPGRSNAFEISRRLGLSPSIIEHAQSLIGADTNEVEN---- 521

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
            +  +L   RR+ E + + A  L  +  +L+R+++ +      R   L  K  ++  + +
Sbjct: 522 -MIAALESARREAEKERQEAQELLKDAEELHRDLQKQMAAFYARRDELYGKAEKKAAKVV 580

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSS 667
             AK + + +++D      ++ A+     +KE E   A   +E   P  D   +      
Sbjct: 581 EEAKEKAEEIIRDLRKMQLESKAN-----VKEHELIDARKQLEELAPKLDRKPAAKAKKQ 635

Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN---IRPIPNSKR 722
              Q G++V V S   K   + +  G +   LVQ G ++++VK+++   IRP P  K+
Sbjct: 636 HIYQPGDEVKVLSFNQKGTLLEQTAGGE--WLVQMGILKMKVKESDMEYIRP-PQQKQ 690


>gi|418637528|ref|ZP_13199847.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus lugdunensis VCU139]
 gi|374838774|gb|EHS02309.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus lugdunensis VCU139]
          Length = 783

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 206/707 (29%), Positives = 342/707 (48%), Gaps = 84/707 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +L+ A  G +L+ +E+  ++R ++ V N +K       L+ D  Q Y PLL
Sbjct: 65  LSGLSKVSPLLHRAKIGSVLNVTELNQLKRLIQ-VQNQFKTFYNQL-LEDDEQQVYYPLL 122

Query: 101 -ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
            + +     LT+L ++I    D   L   D AS +L+ IR++     +R  +NLD ++K 
Sbjct: 123 HDNMMRLPVLTDLFQEINDKCDTHDL--YDHASYELQGIRSKISSTTQRIRQNLDRIVKN 180

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
            + Q      +   ++T R  R  + +KA ++     GI  + S+SG T ++EP   VE 
Sbjct: 181 QSNQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEM 235

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN   RL N E  E   IL++LT  +A+   +     + +  +D   A+A +A  + G  
Sbjct: 236 NNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKARYASAIKGTK 295

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P       +   ++       HPLL            +N+     DVE            
Sbjct: 296 PTFYEARTIYLPNAF------HPLL------DKETVVANTIEFADDVE------------ 331

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 332 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 374

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H+  IV IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 375 HDVFCDIGDEQSIEQSLSTFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGAALAMS 434

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 435 ILDYTRALGALVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 494

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
           +I+K +G +  II +A+ ++     E           +LM E   LE  A+   +   E+
Sbjct: 495 DISKKLGLNLSIINKAKTMIGTDEQEI----------NLMIE--SLEKNAKRVDTQRIEL 542

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA--DE 633
             L +E +    DL+++    +A E Q ++   + A  ++    ++ +  L++     D+
Sbjct: 543 DHLLKEAQQTHDDLEKQYNQFQAYEKQLIEDAKDKANQRVKAATKEADEILKELRTLRDQ 602

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
             + +KE E     I +  + D+ +            ++     G++V V S G K   V
Sbjct: 603 KGADVKEHE----LIDKKKQLDNQYEAKSIKQQVQKQKYDKIVAGDEVKVLSYGQK-GEV 657

Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 735
           +E+ G+D+ V VQ G +++++   ++  I    +K    P   +++Q
Sbjct: 658 LELVGNDEAV-VQMGIIKMKLPIEDLEKI----KKKQEKPTKMIKRQ 699


>gi|168179617|ref|ZP_02614281.1| MutS2 family protein [Clostridium botulinum NCTC 2916]
 gi|226950552|ref|YP_002805643.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum A2 str. Kyoto]
 gi|421835524|ref|ZP_16270271.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum CFSAN001627]
 gi|254766595|sp|C1FKL4.1|MUTS2_CLOBJ RecName: Full=MutS2 protein
 gi|182669561|gb|EDT81537.1| MutS2 family protein [Clostridium botulinum NCTC 2916]
 gi|226843815|gb|ACO86481.1| MutS2 family protein [Clostridium botulinum A2 str. Kyoto]
 gi|409742817|gb|EKN42043.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum CFSAN001627]
          Length = 788

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 212/707 (29%), Positives = 354/707 (50%), Gaps = 70/707 (9%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           S+ E ++ L +T  A  ++ ++   P +   + DI   ++ A  G  L P ++  +   L
Sbjct: 39  SMYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKGSALLPGQLLKIAAVL 96

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
           R      + +    E +      Y  L  + +    L ++EE+I   I+ +  I  DRAS
Sbjct: 97  RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEIA-DRAS 150

Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L  IR   +++N    + ++SL++  ++ +       + + T R  R  + +KA HK 
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL++L+A+I  +   +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           K   + V E+D  FA+A FA   +  CP ++ +  V       IEG +HPL         
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                        ++  E+             VPI +K+  E   ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL  LM+ +GL +PA+ +  + +F+ + ADIGD QS+EQ+LSTFS H+  IV+I++ 
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
               SLVL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     +    EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALRKEGVEN 462

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETLRPTYR+L G  G SNA  I+K +G    II  A++ +       +  R  
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
           EL ++L E+  K E  AR A +L  E     ++ E++ + L +   +      ++ +  +
Sbjct: 518 ELIENLQEKSIKAEEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARREAKNII 577

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
             AK + D +++D     R   + +    ++E    +   +++    +  +V E      
Sbjct: 578 KEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHEGEALKN 637

Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
             + G++V + S+  K+  V+  P +   VLVQ G M++     ++R
Sbjct: 638 VKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITANIKDLR 682


>gi|15615668|ref|NP_243972.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           halodurans C-125]
 gi|20139206|sp|Q9K8A0.1|MUTS2_BACHD RecName: Full=MutS2 protein
 gi|10175728|dbj|BAB06825.1| DNA mismatch repair protein [Bacillus halodurans C-125]
          Length = 785

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 215/689 (31%), Positives = 333/689 (48%), Gaps = 73/689 (10%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQRYS 97
           L  I DI   L  A  G LL  SE+  V  T+   R +    + + E  E D        
Sbjct: 64  LGGIFDIKPHLKRAKIGGLLHASELLEVASTIYGGRQLKKFIETMIEEEEAD-------L 116

Query: 98  PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 156
           PLL E  +    LT+LE  I  CID    + LD AS  L  +R + +    N+ S L+ +
Sbjct: 117 PLLGEFARQIVPLTDLERAIKQCIDDNGHV-LDSASPTLRTLRHQIRSFEANVRSKLEGI 175

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
                 A  +   ++T R  R  + +K  ++     GI  + S+SGAT F+EP+  VE N
Sbjct: 176 TRSSNTAKMLSDAIVTIRNDRYVIPVKQEYRGAF-GGIVHDQSASGATLFVEPQAVVEIN 234

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N        E  E   ILS L+ ++++   ++   +D + E+D   ARA + + +    P
Sbjct: 235 NQLREAKAKEQREIERILSELSMQVSEHVDDLFVNVDVLAELDFIMARAHYGKAIRATQP 294

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
           IL+++ ++           +HPL+                P                   
Sbjct: 295 ILNNRGYLLIKQG------RHPLI----------------P------------------- 313

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
            D  VPIDI++      +VITGPNTGGKT ++KT+GL +LM+++GL++PA+    L  F 
Sbjct: 314 DDEIVPIDIELGHSYSSLVITGPNTGGKTVTLKTIGLLTLMAQSGLHVPAEEESELAVFK 373

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            + ADIGD QS+EQ+LSTFS H++ IVDIL  V  ESLVL DE+G+GTDP+EG ALA +I
Sbjct: 374 HVFADIGDEQSIEQSLSTFSSHMTNIVDILGKVDHESLVLFDELGAGTDPTEGAALAIAI 433

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L  +  R    V TTHY++L           NA+ EF +ETL PTYR+L G  G SNA  
Sbjct: 434 LDDVYRRGARIVATTHYSELKGYAYNREGVMNASVEFDVETLSPTYRLLIGVPGRSNAFA 493

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I+K +G + KII++A+  +     +    +   +  SL + ++  ES    A     E  
Sbjct: 494 ISKRLGLEEKIIEQAKAHI-----DEDASQVESMIASLEQSQKSAESDWEEAEKALQEAE 548

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV---QDFENQLRDASADE 633
            L  +++ +  DL++    + A+  QQ +Q +  AK + + ++   +D + Q       +
Sbjct: 549 QLRLDLQKKLDDLEKEKERILAEAEQQAEQAVKDAKEEAEVIISELRDLQKQGVSVKEHQ 608

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 693
           I    K  E A   + +  +       +      F P  G++V V S G K   V +V  
Sbjct: 609 IIDAKKHLEEAAPKLTKQQKK---VKRTAEKKREFKP--GDEVKVLSFGQKGHIVEKV-- 661

Query: 694 DDDTVLVQYGKMRVRVKKNNI----RPIP 718
            +    VQ G M+++V+ +++    RP P
Sbjct: 662 SEAEYQVQMGIMKMKVEASDLQLIDRPQP 690


>gi|374578851|ref|ZP_09651945.1| MutS2 family protein [Desulfosporosinus youngiae DSM 17734]
 gi|374414933|gb|EHQ87368.1| MutS2 family protein [Desulfosporosinus youngiae DSM 17734]
          Length = 788

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 204/709 (28%), Positives = 341/709 (48%), Gaps = 76/709 (10%)

Query: 24  LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           L +T  A  +++  PL  +   ++I   +   + G ++   E+  +R TLR      + L
Sbjct: 49  LQKTEEAKNLLRGNPLFSVRGSKEIRSYIERCLRGGVIQGEELLEIRDTLRVGRKTKQLL 108

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRA 140
            E+ E        +  L +++        LE++I  CI  D K   + D AS +L    A
Sbjct: 109 LESRE-------EFPGLWDIVFPIEPQKVLEDEITRCISEDGK---VADNASPEL----A 154

Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDK----PLITKRRSRMCVGIKASHKYLLPDGIAL 196
           + +R++  L + +++      +  G  K    P+IT+R  R  + IK  ++   P GI  
Sbjct: 155 DLRRSINRLQNRIRESLEGTLRNSGYQKMLQDPIITQRSDRYVIPIKQEYRTSFP-GIVH 213

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP   V   N    +   E  E   IL +L+A+I     EI  L + + 
Sbjct: 214 DQSASGATLFIEPMPVVHLGNELREVILKEQREVQRILQMLSAQIEARADEIADLHEALA 273

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           ++DL  A+A  +  M+   P L +   +    +      +HPL+ G              
Sbjct: 274 QLDLVVAKAHLSVTMNAGTPELVAGQQMKLVQA------RHPLISGGV------------ 315

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                                   VP+ +++  +   +VITGPNTGGKT ++K +GL + 
Sbjct: 316 ------------------------VPLSLELGIDFDTLVITGPNTGGKTVALKVVGLMAA 351

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+++GL +PA++  R+  F  I ADIGD QS+EQ+LSTFSGH+  IV+I+      SLVL
Sbjct: 352 MNQSGLQIPAESDSRMGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIINRADGRSLVL 411

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
           +DE+G+GTDP+EG ALA  IL  L +R    V TTHY  L     +  R +NA+ EF  E
Sbjct: 412 LDEVGAGTDPTEGAALAMGILAELHERGCRTVSTTHYGALKTFAYETPRVKNASVEFDTE 471

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TLRPTYR+L G  G SNA  IA  +G   +++++A   V     ER+    ++L ++L E
Sbjct: 472 TLRPTYRLLIGIPGKSNAFTIAGRLGLSERVLEKANTFV----TEREMQ-VADLIENLGE 526

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
             R++E +   A +    +    + +E+++  LD     L A    +  + +   K + D
Sbjct: 527 THREIELEKEKAETGRRAVEKQTKALEEKSIRLDEEFELLMAMARDEANELIRGVKREAD 586

Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ--FGE 674
            ++++ +  L+  +  + +  I+++      I  + + D    V  + +     Q   G+
Sbjct: 587 AIIEELKAALKKENKQQQD--IEKARQGFHRI--SAKLDHGRQVKRSGSELTADQIMLGQ 642

Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
            V++  L  K   VV++P     VLVQ G M+V V    ++     K+K
Sbjct: 643 TVYMTKLRQK-GQVVKLPNASGEVLVQAGIMKVMVPLTELKLAQEEKKK 690


>gi|182417186|ref|ZP_02948554.1| MutS2 family protein [Clostridium butyricum 5521]
 gi|237668115|ref|ZP_04528099.1| MutS2 family protein [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182379028|gb|EDT76534.1| MutS2 family protein [Clostridium butyricum 5521]
 gi|237656463|gb|EEP54019.1| MutS2 family protein [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 786

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 214/721 (29%), Positives = 361/721 (50%), Gaps = 76/721 (10%)

Query: 12  PFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
           P+    E + KL ++T+ AL ++  +  P  L  + DI   +  A  G  L+P ++  + 
Sbjct: 36  PYDNVYEINNKL-DETNEALEVILDKGNP-PLEGLFDIHEGVERARKGGTLTPEQLLKIG 93

Query: 70  RTLRAVNNVWKKLT-EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
            TLRA  N+ +    E  E   + L+  + +L  +KN      LE+ I   I  +  I  
Sbjct: 94  STLRAARNMKEFFKREDFEKAYERLEDLAYILTPVKN------LEDDIERSIVSEEEIS- 146

Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASH 186
           D+AS  L  IR    R+++  +S +++  + I ++    +   L T R  R  + +K+ +
Sbjct: 147 DKASATLYNIR----RSLKEKNSSVREKISSIVRSHSKYLQDDLYTMRGDRYVIPVKSEY 202

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           K  +P GI  + SS+GAT+F+EP   V  NN    L   E AE   IL+ L+ ++ ++  
Sbjct: 203 KSAVP-GIVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIDRILAELSFKVKENSE 261

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           +       ++E D  FA+A + + ++ V P++        D   NI   +HP++      
Sbjct: 262 QCLSNFKMLVEFDFIFAKARYGERLNAVRPLIRE------DGRFNIYSGRHPMI------ 309

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                                          D  VP D+ +  +   ++ITGPNTGGKT 
Sbjct: 310 -----------------------------DDDKVVPSDVYIGEDFDTLMITGPNTGGKTV 340

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++K +GL  +M  +GL +PA+++  L +F  + A+IGD QS+EQNLSTFS H++ IV+I+
Sbjct: 341 TIKMVGLLHIMGLSGLLIPARDNSSLSFFTEVFAEIGDEQSIEQNLSTFSSHMTNIVEIM 400

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
             V  +SLVL DEIGSGTDP+EG ALA SI++ LR R    + TTHY++L     K    
Sbjct: 401 RYVDDKSLVLFDEIGSGTDPAEGAALAISIIETLRSRKSRIIATTHYSELKAYALKTDGV 460

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQ 544
           ENA+ EF +ETLRPTYR+L G  G SNA  I+K +G    +I+RA+  +  E L+ E   
Sbjct: 461 ENASVEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKAYMSEENLQFEN-- 518

Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKAKETQ 602
                L + L E+    + +AR A++L  E  +L    ED+ + L+  R  A++ A+   
Sbjct: 519 -----LIRDLQEKSIVAKKEAREASALKKEAEELKLRYEDKLQKLEKARDKAYMDAR--H 571

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
           + ++ +  AK + D +++      +        + ++E    +   +E H+     ++ E
Sbjct: 572 EAKEIIANAKEEADEILKAMRALEKMGIEGGGRARLEEERKKLKDSLE-HKEKGLHNMKE 630

Query: 663 TNTSSFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
                 T    G +  + SL ++   ++ +P +   V V+ G M++ VK  ++R    +K
Sbjct: 631 NEGEPITNVTLGMEAFLPSL-NQTVVIISMPDNRGDVQVEAGIMKINVKLKDLRKTKVTK 689

Query: 722 R 722
           +
Sbjct: 690 Q 690


>gi|325681531|ref|ZP_08161056.1| recombination and DNA strand exchange inhibitor protein
           [Ruminococcus albus 8]
 gi|324106798|gb|EGC01089.1| recombination and DNA strand exchange inhibitor protein
           [Ruminococcus albus 8]
          Length = 801

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 225/733 (30%), Positives = 347/733 (47%), Gaps = 98/733 (13%)

Query: 24  LNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           + +T++AL M ++       +I +++  LN A +G  LS  E+  +++ L   N + +  
Sbjct: 49  VGKTASALEMSIKYGTPGFYSINNVSASLNRAKAGGTLSLGELLEIKKVLGQTNELTRWF 108

Query: 83  TEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
            +A     D     S L E L  N +    LE  I   +D + L   D AS +L  IR +
Sbjct: 109 EQAE----DKSTPLSYLFEQLFPNKSLWQRLETAI---LDSENLS--DDASPELRSIRNK 159

Query: 142 RKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
             +      E LD ++K  + Q +    + + ++T R  R  V +K   K  +  G+   
Sbjct: 160 IAKAGLKIRETLDKMIKSPSTQKY----LQESIVTMRDGRFVVPVKTEFKGNV-GGLVHG 214

Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
            S++G+T F+EP   VE NN    L   E  E   IL+  + E A  + +I+   D  ++
Sbjct: 215 TSATGSTLFIEPISVVEANNDIRILQGKEQDEIHRILTEFSKECAMMQPQIESSYDAAVK 274

Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
           +DL FA+A     M  V P       +S D  I +   +HPL+             + N 
Sbjct: 275 LDLYFAKANLGAKMRAVNP------EISDDGVIVLNKARHPLI-------------DENK 315

Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
           +                      VPI+        V+VITGPNTGGKT ++KT+GL +LM
Sbjct: 316 V----------------------VPINFSSGESYNVLVITGPNTGGKTVTLKTVGLLTLM 353

Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
           +  GL +PA +  R+  +  ILADIGD QS+EQ+LSTFS H+  + +ILE    ESLVLI
Sbjct: 354 TMCGLLIPASDGCRISVYKKILADIGDRQSIEQSLSTFSSHMGNVREILEKADSESLVLI 413

Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
           DE+GSGTDP EG ALA SI++ LR      V TTHY ++          ENA+ EF +ET
Sbjct: 414 DELGSGTDPVEGAALAVSIIERLRQFGATVVTTTHYQEIKLYALDTDGVENASCEFDVET 473

Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLME 556
           ++PTY+++ GS G SNA  I+K++G D  II  A+ L+       + +R+ E +  +L  
Sbjct: 474 MKPTYKLVIGSPGKSNAFAISKNLGIDDDIIAYAEGLIS------EDNRRFETIIDNLER 527

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
            R +LE   R A    AE   L  E+E++ K           K   + + EL  A+ Q  
Sbjct: 528 ARIQLEENNRLAEKYRAEAEKLRNELEEQRK-----------KFYDEKENELEKARRQAS 576

Query: 617 TVVQDFENQLRDASADEINSLIKESESA---IAAIVEAHRPDDDFS--------VSETNT 665
            +V   + + + A  DE++ L KE E +     AI   H+     +        VSE   
Sbjct: 577 DIVNRVQRESQ-ALVDELDQLRKEKEKSGFTQKAIDARHKQKSTMNKLYKEANPVSEQAD 635

Query: 666 SSFT-P---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
             +  P   + G+ V +     +   VV  P D     VQ G M+ ++    +R +   K
Sbjct: 636 DDYVLPRPLKKGDTVLITDT-KRNGIVVTPPDDKGMCFVQAGIMKTKIDVKKLRLV--EK 692

Query: 722 RKNAANPAPRLRK 734
           ++    P P+ +K
Sbjct: 693 KQPVKTPQPQKKK 705


>gi|260587418|ref|ZP_05853331.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
 gi|260542285|gb|EEX22854.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
          Length = 792

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 217/721 (30%), Positives = 358/721 (49%), Gaps = 92/721 (12%)

Query: 16  SLEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           +L E + +  +T+ ALA + Q   L    ++DI G L     G  L   E+ ++   L  
Sbjct: 39  NLNEIEIMQQETADALARIYQKGSLSFGGVKDIRGSLKRLEIGSTLGTGELLSLCSLLEN 98

Query: 75  VN--NVWKKLTEAAE----LDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI 126
            N    + +   A E    LDG  + LQ  +PL   ++ C  L+E E             
Sbjct: 99  TNRAKAYARRENAEEKQDSLDGMFEILQPLTPLALEIRRC-ILSEEE------------- 144

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQI--FQAGG----IDKPLITKRRSRMCV 180
           I D AS  L+ IR    R+M+N +    K+ +Q+  + +G     +   ++T R  R C+
Sbjct: 145 IADDASAGLKQIR----RSMKNTND---KIHSQLSSYVSGSARTYLQDAVVTMRNGRYCI 197

Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
            +KA HK  +P G+  + SS+G+T F+EP   V+ NN    L   E AE   ILS L+  
Sbjct: 198 PVKAEHKGHVP-GMIHDQSSTGSTVFVEPMAIVKLNNDLRELEVKEQAEIEIILSNLSQY 256

Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
            A++   I+  +  + ++D  FARA  A+  +   P  +++        I+++  +HPL+
Sbjct: 257 AAENLEAIEDNLKVMTQLDFIFARALLAKAQNATEPRFNTKG------IIDLKKARHPLI 310

Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
               +                                   VPID+++  +  ++V+TGPN
Sbjct: 311 DKHKV-----------------------------------VPIDVRLGEDFDLLVVTGPN 335

Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
           TGGKT S+KT+GL +LM ++GL++PA ++ RL  F  + ADIGD QS+EQ+LSTFS H++
Sbjct: 336 TGGKTVSLKTIGLLTLMGQSGLHIPAFDNSRLSIFKEVYADIGDEQSIEQSLSTFSSHMT 395

Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
            +V  +E   R+SLVL DE+G+GTDP+EG ALA +IL +L  +    + TTHY++L    
Sbjct: 396 NVVRFIEKADRDSLVLFDELGAGTDPTEGAALAIAILSHLHAQGIRTMATTHYSELKVYA 455

Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
                 ENA+ EF +ETLRPTYR+L G  G SNA  I+  +G    II +A+   E++  
Sbjct: 456 LSTHGVENASCEFDVETLRPTYRLLIGIPGKSNAFAISGKLGLPSYIIDKAK---EQISQ 512

Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
           E +     ++  +L + R+ +E++    A    EI  L +++E++   L++R   +    
Sbjct: 513 EDESF--EDVLSTLEQSRKTIEAEEAEIARYKTEIESLKKQLEEKQDKLEQRKERILRDA 570

Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAIAAIVEAHRPDDDFS 659
            ++  + L  AK   D  ++ F    +++ SA E    +++  S +   ++         
Sbjct: 571 NEEAHRILREAKEYADQTMKIFNKAGKESMSAKE----LEQKRSELRKKMDQTGKKMALK 626

Query: 660 VSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
             E   S+ T +    G+ V V SL  K  T+   P     V VQ G +R +V  ++++ 
Sbjct: 627 TPEKKKSTLTAKDISLGDAVKVLSLNVK-GTISSKPDAKGMVFVQMGILRSKVHLSDLQL 685

Query: 717 I 717
           I
Sbjct: 686 I 686


>gi|294501473|ref|YP_003565173.1| DNA mismatch repair protein MutS [Bacillus megaterium QM B1551]
 gi|294351410|gb|ADE71739.1| DNA mismatch repair protein MutS [Bacillus megaterium QM B1551]
          Length = 787

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 223/721 (30%), Positives = 356/721 (49%), Gaps = 96/721 (13%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           Q+  ++ +  L +  + PL    I D+   +  A  G  LS +E+  V  T+ A   V K
Sbjct: 47  QEATDEATTVLRLRGNVPL--GGIFDVRSSVKRAEIGGTLSSNELLDVASTIYAARQV-K 103

Query: 81  KLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
           +  E    D D LQ   P++ E ++    L E+E+ I   ID     +LD AS+ L  IR
Sbjct: 104 QFIEQVVEDED-LQL--PIITEHIEKLMPLPEVEQTIKMSIDENG-TVLDGASDQLRGIR 159

Query: 140 AERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
            + +    R  E L+SL++  +AQ      +   ++T R  R  + +K  ++     GI 
Sbjct: 160 QKLRSTESRIREKLESLIRSSSAQKM----LSDAIVTIRNERFVIPVKQEYRSAY-GGIV 214

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI------LSLLTAEIAKSEREIK 249
            + SSSGAT F+EP+  V  NN    L  +++ E+  I      L++  AE+A   R+  
Sbjct: 215 HDQSSSGATLFIEPQAIVTLNN---ELQEAKVKEKQEIERILIALTVQVAEVANELRQNV 271

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
           YL+    E+D  FA+  ++  +    P ++ + ++    +      KHPL+         
Sbjct: 272 YLLG---ELDFMFAKGRYSHELKASKPKMNDRGYIKLVKA------KHPLIA-------- 314

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                    + DV                  V  DI++  +   +VITGPNTGGKT ++K
Sbjct: 315 ---------QEDV------------------VANDIELGDQYTSIVITGPNTGGKTVTLK 347

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           TLGL +LM++AGL +PA +   +  F  + ADIGD QS+EQ+LSTFS H+  IVDIL+ V
Sbjct: 348 TLGLFTLMAQAGLQIPALDGSEMAVFKHVFADIGDEQSIEQSLSTFSSHMVNIVDILQKV 407

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
             ESLVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L           NA
Sbjct: 408 DHESLVLFDELGAGTDPQEGAALAISILDQVYERGARVVATTHYPELKAYGYNREGVVNA 467

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF +ETL PTY++L G  G SNA  I+K +G   ++I+RA+  +       + ++   
Sbjct: 468 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLSAEVIERAKGYI-----GSETNKVEN 522

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
           +  SL + RR+ E +   A  L  E   L++E++ +  + + +   L  K  ++ Q  + 
Sbjct: 523 MIASLEDSRRQSEHELEEAEELRKEAQKLHKELQSQIIEFNEKRDKLYEKAEEKAQATVK 582

Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD---------FSV 660
            A  + + ++ D    LR  S     +L+KE E     ++EA +  +D            
Sbjct: 583 AASEEAEKIISD----LRKMSQKNY-ALVKEHE-----LIEARKRLEDAVPTLEKSKKKP 632

Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
           +       T Q G++V V S G K  T+VE   +++   VQ G M+++VK+ ++  I + 
Sbjct: 633 AAPKKQERTLQAGDEVKVLSWGQK-GTLVERVSNNEW-QVQMGIMKMKVKEKDLEYISSP 690

Query: 721 K 721
           K
Sbjct: 691 K 691


>gi|323694011|ref|ZP_08108195.1| MutS2 family protein [Clostridium symbiosum WAL-14673]
 gi|355625337|ref|ZP_09048200.1| MutS2 protein [Clostridium sp. 7_3_54FAA]
 gi|323501947|gb|EGB17825.1| MutS2 family protein [Clostridium symbiosum WAL-14673]
 gi|354821364|gb|EHF05752.1| MutS2 protein [Clostridium sp. 7_3_54FAA]
          Length = 800

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 224/734 (30%), Positives = 350/734 (47%), Gaps = 99/734 (13%)

Query: 16  SLEESQKLLNQTS-AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR--TL 72
           SLEE ++   +T+ AA  +     L    ++D+ G L     G  L+  E+ AV    T+
Sbjct: 39  SLEEIRRNQTETTDAATRVRMKGSLSFGGVKDVRGSLKRLEIGSSLNIIELLAVSSLLTV 98

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
            A    + +  E +EL  DSL       E+ +    LT +  +I  CI  +   + D AS
Sbjct: 99  TARAKAYGR-REESELPDDSLD------EMFRTLEPLTPVNTEIKRCIISED-DVSDDAS 150

Query: 133 EDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L  +R   K    R    L+S+L    A + +A      +IT R  R C+ +K+ +K 
Sbjct: 151 PGLSKVRKSMKIIAGRVHTQLNSVLNSSRAYLQEA------VITMRDGRYCLPVKSEYKN 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G+  + SS+G+T F+EP   V+ NN    L   E  E   +L+ L+ E+      I
Sbjct: 205 QVP-GMVHDQSSTGSTIFIEPMAVVKLNNELRELEIQEKREIEFVLTALSGELVPYTDTI 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
              ++ + ++D  FA+A  ++  +   P  +++ +      INI+  +HPLL        
Sbjct: 264 ALNLELLAKLDFIFAKAALSRHFNCTEPKFNNRRY------INIKDGRHPLL-------- 309

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                  +P +                     VPI+I +  +  ++++TGPNTGGKT S+
Sbjct: 310 -------DPKQV--------------------VPINIYLGDQFDLLIVTGPNTGGKTVSL 342

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL +LM +AGL++PA +   L  F+ + ADIGD QS+EQ+LSTFS H++ IV ILE 
Sbjct: 343 KTVGLFTLMGQAGLHIPAFDGSELAVFEEVFADIGDEQSIEQSLSTFSAHMTNIVSILEQ 402

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
               SL L DE+G+GTDP+EG ALA ++L +L +     + TTHY++L          EN
Sbjct: 403 ADSNSLCLFDELGAGTDPTEGAALAIAVLSFLHNMSCRTMATTHYSELKVYALTTPGVEN 462

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A  EFSLETLRPTYR+L G  G SNA  I+K +G    II+ A+K +     E++     
Sbjct: 463 ACCEFSLETLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIEDAKKHI-----EQEDESFE 517

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
           +L   L + R  +E +    AS   ++  L R +E + +    +   +  K  ++ Q+ L
Sbjct: 518 DLLADLEDNRVTIEKERAEIASYKEQVAILKRRLEQKEERFSEQKDKMLEKAREEAQRIL 577

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR-------PDDDF--- 658
             AK   D  ++             IN L K  ES +   +EA R        D D    
Sbjct: 578 QDAKDTADQTIRS------------INRLAK--ESGVNKELEAERSKLRNKLSDIDKKLA 623

Query: 659 ---SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
              +V +   S  + + G+ V V S+  K  TV  +P     + VQ G +R  V   NI+
Sbjct: 624 VKPAVPKKAVSPKSLRLGDTVRVLSMNLK-GTVSSLPNAKGDLYVQMGILRSLV---NIK 679

Query: 716 PIPNSKRKNAANPA 729
            +     K  + P 
Sbjct: 680 DLELVDEKTISGPG 693


>gi|365845197|ref|ZP_09385983.1| MutS2 family protein [Flavonifractor plautii ATCC 29863]
 gi|364561374|gb|EHM39279.1| MutS2 family protein [Flavonifractor plautii ATCC 29863]
          Length = 789

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 215/725 (29%), Positives = 358/725 (49%), Gaps = 79/725 (10%)

Query: 18  EESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           ++ Q+ L++TSAA+ M  ++  P   S ++ +A  L  A  G  L+  E+  +   LRA 
Sbjct: 44  DDVQRALDETSAAVDMSALRGSP-SFSGVKPVAASLQRAHMGGALNTRELLDIAAVLRAA 102

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
            +  +         G+  +R    ++ L ++      LE+KI   I  +  I  D AS +
Sbjct: 103 RSAREY--------GEGDERKKTCIDHLFRSLTANRFLEDKITGSIVGEDEIA-DAASPE 153

Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
           L  IR   +     +  +L K+ +   QA  + + +IT+R  R  V +K+ HK  +P G+
Sbjct: 154 LASIRRHIRATASKVRDILNKLLSS-NQAKYLQEAIITQRNDRFVVPVKSEHKNDVP-GL 211

Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
             +VSSSGAT+F+EP G V+ NN    L   E  E   IL+ L+AE A+ + +I    D 
Sbjct: 212 VHDVSSSGATFFIEPMGVVKANNELKELQAREEKEIERILAELSAECAQFKDDITQDYDL 271

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
           ++ +D+ FARA  A  M    P +        +  + +   +HPLL              
Sbjct: 272 LILLDVIFARAKLAYRMRACAPRI-------VERGLYLRKARHPLL-------------- 310

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
            +P                    D  V  D+ +  +   +VITGPNTGGKT ++KT+GL 
Sbjct: 311 -DP--------------------DRAVANDLMLGEDFDTLVITGPNTGGKTVTIKTIGLL 349

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
           +LM++ GL++P  +  R+  F  +LAD+GD QS+ Q+LSTFS H+  IV IL     E+L
Sbjct: 350 TLMAQCGLHIPVSDDSRVKVFRRVLADVGDEQSIAQSLSTFSSHMVNIVGILGEADGETL 409

Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
           +L DE+G+GTDP EG ALA +I++  R+   L   TTHYA+L          ENA+ EF+
Sbjct: 410 ILFDELGAGTDPIEGAALAAAIIESAREMGALVAATTHYAELKVYAMTTPGVENASCEFN 469

Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
           +++L PTYR+L G  G SNA  I++ +G  + IIQ+A       R + +  R  ++   L
Sbjct: 470 VDSLAPTYRLLIGIPGKSNAFAISERLGLPKSIIQKAAA-----RIDAENVRFEDVLTQL 524

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL---KAKETQQVQQE---- 607
            E+R+++E +   AA L        RE+E+ AK      A +   +AK  ++ Q E    
Sbjct: 525 DEQRQEMEREKEAAARLR-------REMEETAKASREYKAKMEAERAKAVEKAQAEARAI 577

Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSETNTS 666
           L+ A+   D V ++  +  R    +E    + +  +A+  ++ EA               
Sbjct: 578 LDEARDTADQVFKELNDMRRRQRKEEDWQRVNDERAALRRSLNEAEGKLGARPEEPAPPP 637

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
           +   + G+ V +  +G + ATV+ V   D ++ +Q G +++  ++  +R +    +++A 
Sbjct: 638 TRPARAGDTVELVKMGTQ-ATVLSV-NKDGSLQLQAGILKITARQEEVRVVEGETQQSAK 695

Query: 727 NPAPR 731
               R
Sbjct: 696 KVVAR 700


>gi|323485118|ref|ZP_08090470.1| hypothetical protein HMPREF9474_02221 [Clostridium symbiosum
           WAL-14163]
 gi|323401548|gb|EGA93894.1| hypothetical protein HMPREF9474_02221 [Clostridium symbiosum
           WAL-14163]
          Length = 800

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 222/734 (30%), Positives = 350/734 (47%), Gaps = 99/734 (13%)

Query: 16  SLEESQKLLNQTS-AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR--TL 72
           SLEE ++   +T+ AA  +     L    ++D+ G L     G  L+  E+ AV    T+
Sbjct: 39  SLEEIRRNQTETTDAATRVRMKGSLSFGGVKDVRGSLKRLEIGSSLNIIELLAVSSLLTV 98

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
            A    + +  E +EL  DSL       E+ +    LT +  +I  CI  +   + D AS
Sbjct: 99  TARAKAYGR-REESELPDDSLD------EMFRTLEPLTPVNTEIKRCIISED-DVSDDAS 150

Query: 133 EDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L  +R   K    R    L+S+L    A + +A      +IT R  R C+ +K+ +K 
Sbjct: 151 PGLSKVRKSMKIIAGRVHTQLNSVLNSSRAYLQEA------VITMRDGRYCLPVKSEYKN 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G+  + SS+G+T F+EP   V+ NN    L   E  E   +L+ L+ E+      I
Sbjct: 205 QVP-GMVHDQSSTGSTIFIEPMAVVKLNNELRELEIQEKREIEFVLTALSGELVPYTDTI 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
              ++ + ++D  FA+A  ++  +   P  +++ +      INI+  +HPLL        
Sbjct: 264 ALNLELLAKLDFIFAKAALSRHFNCTEPKFNNRRY------INIKDGRHPLL-------- 309

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                  +P +                     VPI+I +  +  ++++TGPNTGGKT S+
Sbjct: 310 -------DPKQV--------------------VPINIYLGDQFDLLIVTGPNTGGKTVSL 342

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL +LM +AGL++PA +   L  F+ + ADIGD QS+EQ+LSTFS H++ IV ILE 
Sbjct: 343 KTVGLFTLMGQAGLHIPAFDGSELAVFEEVFADIGDEQSIEQSLSTFSAHMTNIVSILEQ 402

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
               SL L DE+G+GTDP+EG ALA ++L +L +     + TTHY++L          EN
Sbjct: 403 ADSNSLCLFDELGAGTDPTEGAALAIAVLSFLHNMSCRTMATTHYSELKVYALTTPGVEN 462

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A  EFSLETLRPTYR+L G  G SNA  I+K +G    II+ A+K +     E++     
Sbjct: 463 ACCEFSLETLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIEDAKKHI-----EQEDESFE 517

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
           +L   L + R  +E +    AS   ++  L R +E + +    +   +  K  ++ Q+ L
Sbjct: 518 DLLADLEDNRVTIEKERAEIASYKEQVAILKRRLEQKEERFSEQKDKMLEKAREEAQRIL 577

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN---- 664
             AK   D  ++             IN L K  ES +   +EA R      +S+ +    
Sbjct: 578 QDAKDTADQTIRS------------INRLAK--ESGVNKELEAERSKLRNKLSDVDKKLA 623

Query: 665 ------TSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
                   + +P+    G+ V V S+  K  TV  +P     + VQ G +R  V   NI+
Sbjct: 624 VKPAVPKKAVSPKSLRLGDTVRVLSMNLK-GTVSSLPNAKGDLYVQMGILRSLV---NIK 679

Query: 716 PIPNSKRKNAANPA 729
            +     K  + P 
Sbjct: 680 DLELVDEKTISGPG 693


>gi|418891775|ref|ZP_13445890.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1176]
 gi|377731107|gb|EHT55164.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1176]
          Length = 782

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 354/709 (49%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A  ++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARCSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|224476251|ref|YP_002633857.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus carnosus subsp. carnosus TM300]
 gi|254766600|sp|B9DPU2.1|MUTS2_STACT RecName: Full=MutS2 protein
 gi|222420858|emb|CAL27672.1| MutS2-like protein [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 782

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 211/708 (29%), Positives = 348/708 (49%), Gaps = 99/708 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS + ++  +++ A  G +L+  E+  ++R ++ V N +K       L+ +    Y  L 
Sbjct: 65  LSGLTEVKPLIHRAKIGSILNVRELNQIKRLIQ-VQNQYKTFYSQL-LEEEEAINYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           E +     LT+L ++I     C    + D AS +L+ IR+      +R  +NLD ++K  
Sbjct: 123 ERMAQLPILTDLYQEI--HQKCDAYDLFDDASHELQSIRSRIHSTSQRIKQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           + Q      +   +IT R  R  + +KA ++    +GI  + SSSG T ++EP   VE N
Sbjct: 181 SNQ----KKLSDAIITVRNDRHVIPVKAEYRQDF-NGIVHDQSSSGQTLYIEPSAVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   ILS+L+ E+A +E +   + + V+ +ID   A+A + Q + G  
Sbjct: 236 NKISRLRNDEKVEVERILSVLSGEVA-AEADACLIAESVMGQIDFLTAKARYGQSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P  + + +V    +       HPLL        +   +N+     D++            
Sbjct: 295 PEFTEERNVYLPKAF------HPLL------DRATVVANTIEFAEDIQ------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +PA +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPALDGSKLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           D +  DIGD QS+EQ+LSTFS H+  IV+IL+     SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 DNVYCDIGDEQSIEQSLSTFSSHMKNIVEILKHADHNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL +++    L + TTHY +L           NA+ EF +  L PTY++L G  G SNA 
Sbjct: 434 ILDHVQKLGSLVMATTHYPELKAYSYNREGVMNASVEFDVNILSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTA 568
            I+  +G    II+ A+ L+      + +   + +  SL    +K+E Q        R A
Sbjct: 494 EISSKLGLSGNIIREAKSLI-----GQDEQEINNMIASLETNAKKVEDQRIELDRLLREA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y + ++  K L   A   K K  Q+V+     A  + D +++D  + +R 
Sbjct: 549 KQVHGDLNKKYEQYQNYEKQLMDDA---KVKANQRVKA----ATKEADDIIKDLRH-MR- 599

Query: 629 ASADEINSLIKESESAIAAIVEAHRP-DDDFSVSETNTSSFTP-----QFGEQVHVKSLG 682
              DE N+ +KE E     ++E  +  D+ +  ++   +         Q G++V V + G
Sbjct: 600 ---DEKNAEVKEHE-----LIEKRKHLDEQYEGTDIKQNVKKQKWDEIQAGDEVKVLTYG 651

Query: 683 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
            K   V+E+  DDD  +VQ G +++++      PI + ++K  A   P
Sbjct: 652 QK-GEVLEIL-DDDEAVVQMGIIKMKL------PIADLEKKKKAQEKP 691


>gi|315649009|ref|ZP_07902103.1| MutS2 family protein [Paenibacillus vortex V453]
 gi|315275690|gb|EFU39044.1| MutS2 family protein [Paenibacillus vortex V453]
          Length = 789

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 222/725 (30%), Positives = 355/725 (48%), Gaps = 100/725 (13%)

Query: 17  LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           LE  + LL  T  A  +  ++  P     I DI   L  A  G  LSP E+ A   T+  
Sbjct: 40  LEAVKDLLAATDQAYTVDRLKGNP-SFRGITDINDALKRARIGGTLSPHELLATSNTIHG 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE----LEEKIGFCIDCKLLIILDR 130
              + K+   A   D          +E+L N + L      LE+ I  CID     +LD 
Sbjct: 99  SRRI-KRFIAALHEDEQ--------IEILFNLSDLISEQKPLEDAIRLCID-DAAEVLDS 148

Query: 131 ASEDLELIRAERK----RNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
           AS +L  IR E +    R  E L+S+++ +  A++ Q       LIT R  R  + +KA 
Sbjct: 149 ASAELSQIRRELRGGEVRIREKLESMIRSQSVAKMLQ-----DQLITIRGDRFVIPVKAE 203

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           ++     GI  + S SGAT F+EP+  V  NN        E  E   IL  LTA++ +  
Sbjct: 204 YRSHF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRMREEREIEVILQKLTAQVGEQA 262

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
             +   +D + ++D  FA+A  A  M    P ++ + ++           +HPL+     
Sbjct: 263 DLLSMDLDLIGQLDFIFAKARLAHVMRASLPRMNDRGYIKLRKG------RHPLI----- 311

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                      P+                   D  VP+D+++      +++TGPNTGGKT
Sbjct: 312 -----------PM-------------------DQVVPLDVELGNTYTSIIVTGPNTGGKT 341

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KT+GL +LM+ +GL++PA+   ++  FD I ADIGD QS+EQ+LSTFS H++ I+ I
Sbjct: 342 VTLKTIGLLNLMAMSGLFIPAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRI 401

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDT 484
           L  ++++SLVL+DE+G+GTDP+EG ALA SIL+++  R+G  ++ TTHY++L     +  
Sbjct: 402 LGQMTQKSLVLLDEVGAGTDPAEGSALAISILEHIH-RMGCRMIATTHYSELKAYAYERK 460

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
              NA+ EF + TL PTYR+L G  G SNA  IA+ +G    I++ A+  V     + + 
Sbjct: 461 GVINASMEFDINTLSPTYRLLVGVPGRSNAFAIAERLGLPGSILEFARGEV-----KEED 515

Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 604
            R   +  SL E R   E +   A  +  E+ +L    E E + L+ +   L  K   + 
Sbjct: 516 QRVEHMIASLEENRHTAEMEREKAEQVRKEMEELRVRHEHELQKLEEQKDKLVDKARMEA 575

Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
           +Q ++ A+ + + ++ D    LR  + +E  S +KE +     ++ A +  DD    +  
Sbjct: 576 RQIVDKARSEAEEIISD----LRKIALEEGAS-VKEHK-----LIAARKRLDDAEPQQGK 625

Query: 665 TS----------SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
            +          S  P  G++V V SL  K   VVE+ G  + V VQ G M+++V  +++
Sbjct: 626 KTGGQRSAKQQRSIEP--GDEVRVFSLNQK-GHVVEMTGSKEAV-VQLGIMKMKVALDDL 681

Query: 715 RPIPN 719
             + N
Sbjct: 682 ELLSN 686


>gi|410667688|ref|YP_006920059.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
           12270]
 gi|409105435|gb|AFV11560.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
           12270]
          Length = 793

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 212/734 (28%), Positives = 343/734 (46%), Gaps = 106/734 (14%)

Query: 11  IPFGKSLE---ESQKLLNQ----TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPS 63
           +P+ + LE   E +++L +    T A  A      L    + D+A +L  A+ G +L P 
Sbjct: 28  VPYVRELEPATEVEEILARQAETTEACHAWRLCPELSFDGVADLAPLLRRALIGGVLEPQ 87

Query: 64  EICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--D 121
           ++ + R TL+A   + K L  A    G  L R       ++ C     L+EKI  CI  D
Sbjct: 88  DLLSCRDTLQAGERLKKALLSA----GRELPRLQARARRIQECR---TLQEKINLCIQPD 140

Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
            +   I D AS +L  +R + +     +  LL ++ ++      + +P+ T R  R  V 
Sbjct: 141 GE---ISDSASPELARLRQQIRTLQVRIRGLLDEILSKPEWNRYLQEPIYTVRGDRYVVP 197

Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
           +K  H+   P G+  ++S SGAT FMEP   V   N  +    +   EE  IL  LT  +
Sbjct: 198 VKQEHRSQFP-GLVHDLSGSGATVFMEPLPLVGPMNELMAKRTAAHREEQRILEELTKMV 256

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
           A     I+  +  + E+D   A+   +  + G  P       +   S       +HPLL 
Sbjct: 257 AAFHDAIQENLRILGELDFILAKGHLSSKLKGNPPRFGDGRCLVLKSG------RHPLLR 310

Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
           G                                      VP+D+ +  +   ++ITGPNT
Sbjct: 311 GKV------------------------------------VPLDLHLGRDFDCLIITGPNT 334

Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
           GGKT ++KT+GL  +M++AGL++PA     LP    + ADIGD QS+EQ+LSTFSGH+  
Sbjct: 335 GGKTVALKTVGLLVVMAQAGLHIPAGERTVLPVLQNVFADIGDEQSIEQSLSTFSGHMKN 394

Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
           IV IL+ V   SLVL+DE+G+GTDP +G AL  +IL  L ++  L + TTH+++L     
Sbjct: 395 IVRILDQVGEGSLVLLDELGAGTDPEQGAALGMAILDRLINKGALIIATTHFSELKIFAH 454

Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
              R ENA+ EF   TL+PTYR+  G  G+SNA  IA  +G D ++++RA+     LRPE
Sbjct: 455 TRQRAENASVEFDSRTLQPTYRLSIGVPGESNAFEIAARLGLDSEVVERARSF---LRPE 511

Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
             Q   S+L + L E++    S    A    AE+  L  ++  E + L  +   + +   
Sbjct: 512 --QRELSDLIKHLKEDQFAASSARAEAELERAEVEKLKEKLRREEERLRNKQQEILSMAH 569

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASA--------------DEINSLIKE-----SE 642
           ++ ++ +  A+ + + +++    ++R   A               +++  I+E      E
Sbjct: 570 EEARELVRTARREAEQLIRFLREKMRQEDARIALEEAQAVRQKLGDLSGRIEERAAATEE 629

Query: 643 SAIAA-IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
           SA A  I +  +P D  ++         P+F ++            V+  PG D  VLVQ
Sbjct: 630 SAFAGDIPDTLKPGDVVAI---------PRFHQE----------GYVISPPGPDGEVLVQ 670

Query: 702 YGKMRVRVKKNNIR 715
            G +++ +    +R
Sbjct: 671 VGALKLHLPIKELR 684


>gi|49483307|ref|YP_040531.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus MRSA252]
 gi|282903692|ref|ZP_06311580.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus C160]
 gi|282905461|ref|ZP_06313316.1| MutS2 protein [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282908435|ref|ZP_06316266.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|283957887|ref|ZP_06375338.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|295427631|ref|ZP_06820263.1| MutS2 protein [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297591415|ref|ZP_06950053.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus MN8]
 gi|415684425|ref|ZP_11449554.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus CGS00]
 gi|418566423|ref|ZP_13130804.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21264]
 gi|418581975|ref|ZP_13146053.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1605]
 gi|418595208|ref|ZP_13158829.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21342]
 gi|418602382|ref|ZP_13165788.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21345]
 gi|418897682|ref|ZP_13451752.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC341D]
 gi|418900552|ref|ZP_13454609.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1214]
 gi|418908854|ref|ZP_13462859.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG149]
 gi|418916937|ref|ZP_13470896.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1267]
 gi|418922724|ref|ZP_13476641.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1233]
 gi|418982055|ref|ZP_13529763.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1242]
 gi|418985723|ref|ZP_13533409.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1500]
 gi|56749238|sp|Q6GHU1.1|MUTS2_STAAR RecName: Full=MutS2 protein
 gi|49241436|emb|CAG40120.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|282328100|gb|EFB58382.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282330753|gb|EFB60267.1| MutS2 protein [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282595310|gb|EFC00274.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus C160]
 gi|283790036|gb|EFC28853.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|295127989|gb|EFG57623.1| MutS2 protein [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297576301|gb|EFH95017.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
           aureus MN8]
 gi|315193814|gb|EFU24209.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus CGS00]
 gi|371970636|gb|EHO88053.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21264]
 gi|374396082|gb|EHQ67333.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21345]
 gi|374402075|gb|EHQ73118.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21342]
 gi|377703020|gb|EHT27336.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1214]
 gi|377704336|gb|EHT28645.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1242]
 gi|377705541|gb|EHT29845.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1500]
 gi|377710385|gb|EHT34623.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1605]
 gi|377736047|gb|EHT60077.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1233]
 gi|377750111|gb|EHT74049.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1267]
 gi|377754850|gb|EHT78756.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG149]
 gi|377760717|gb|EHT84593.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC341D]
          Length = 782

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 354/709 (49%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A  ++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARCSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI   +  V    +       HPLL                       N E  V +    
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++     E      +E+ +SL    +++E+Q        + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
             +H ++   Y++ ++  K L   A        ++  Q++  A  + D +++D   QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  R DD +       +    ++     G++V V S G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV--------KKNNIRPIPNSKRKN 724
           K   V+E+  D++ + VQ G +++++        +K  ++P     R+N
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQN 699


>gi|448238979|ref|YP_007403037.1| DNA mismatch repair protein [Geobacillus sp. GHH01]
 gi|445207821|gb|AGE23286.1| DNA mismatch repair protein [Geobacillus sp. GHH01]
          Length = 792

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 185/528 (35%), Positives = 274/528 (51%), Gaps = 64/528 (12%)

Query: 17  LEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
           LEE    L++T  A A+++     PLD   + DI   L  A  G  LSP E+  V  T  
Sbjct: 48  LEEVAAWLDETDEAAAVLRLAGYAPLD--GVVDIRPHLKRAAIGGTLSPQELLEVAATSA 105

Query: 74  AVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           A   + + + +  E  G  D L  Y+   EL++    +  LE  I   ID    + LD A
Sbjct: 106 ASRQMKRLIMDLHEEHGGLDRLSTYAD--ELVE----VPALEHDIRRSIDDHGEV-LDAA 158

Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
           S+ L  +R + +    R  E L+++++  +AQ      +   +IT R  R  + +K  ++
Sbjct: 159 SDRLRSLRGQIRSVEARIREKLENIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYR 214

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
                GI  + S+SGAT F+EP+  VE NN        E  E   IL  L+A++A+    
Sbjct: 215 GAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEP 273

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           +   ++ +  +D AFA+A +A+ +    P ++S+ ++ F  +      +HPLL       
Sbjct: 274 LARAVESLAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL------- 320

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                        D E +               VP DI++  +   +VITGPNTGGKT +
Sbjct: 321 -------------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVT 352

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL +LM++AGL++PA +      F  + ADIGD QS+EQ+LSTFS H+  IVDIL 
Sbjct: 353 LKTIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILR 412

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
            V  ESLVL DE+G+GTDP EG ALA +IL  +  R    V TTHY +L           
Sbjct: 413 HVDGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGSRTVATTHYPELKAYGYNRPGVV 472

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           NA+ EF  ETLRPTY++L G  G SNA +I++ +G D +II+RA+  V
Sbjct: 473 NASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV 520


>gi|169829506|ref|YP_001699664.1| MutS2 protein [Lysinibacillus sphaericus C3-41]
 gi|168993994|gb|ACA41534.1| MutS2 protein [Lysinibacillus sphaericus C3-41]
          Length = 788

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 212/715 (29%), Positives = 344/715 (48%), Gaps = 82/715 (11%)

Query: 22  KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           +LL +    L++++ +  + +  I D+      A  G +L+  E+  +  T+RA + + +
Sbjct: 46  QLLEEMDEGLSILRVKGNVPMGGIFDVRPSARRAQIGGMLAAIELMEISSTIRA-SRILR 104

Query: 81  KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR- 139
              E  +L+ D +      +   +    LT L+ +I  CID     +LD AS  L  IR 
Sbjct: 105 NFIE--DLEADEVIEIPHFIAKKETMPVLTGLQHEINNCIDDNG-AVLDSASTTLRTIRQ 161

Query: 140 ---AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
              +E  +    L+SL++   A       +   L+T R  R  + +K  +++    GI  
Sbjct: 162 SLRSEEAKVRSKLESLIRGSNASKM----LSDTLVTIRNDRFVIPVKQEYRHHY-GGIVH 216

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + SSSG T F+EP   V+ NN   RL   E AE   IL  L+A +     ++  L+  + 
Sbjct: 217 DQSSSGQTLFIEPDSIVQANNEIHRLKMKEQAEVERILLALSAMVQDVAPDLFNLVKVLG 276

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           +ID+  A+  + Q      P ++       D  I +   +HPLL                
Sbjct: 277 DIDVILAKGKYGQANKCTMPKMNQ------DGYIRLVRARHPLL---------------- 314

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
           P+                   D  VP DI+   +   +VITGPNTGGKT ++KT+GL +L
Sbjct: 315 PI-------------------DIAVPNDIEFGKDITAIVITGPNTGGKTVTLKTVGLCTL 355

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++AGL +PA +  +L  F  + ADIGD QS+EQ+LSTFS H+  IVDIL+    ESLVL
Sbjct: 356 MAQAGLPVPALDGSQLAVFKQLFADIGDEQSIEQSLSTFSSHMVNIVDILQKFDHESLVL 415

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA SIL  +  R    + TTHY +L           NA+ EF +E
Sbjct: 416 FDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVANASVEFDIE 475

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TL PTYR+L G  G SNA  I+  +G    II+RA+      R     H    +  SL E
Sbjct: 476 TLSPTYRLLIGVPGRSNAFEISSRLGLPESIIERAKGFTGTDR-----HEVESMIASLEE 530

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
            RR+ E  A  + +L  E   L +E++D+ +  + R   L  K  ++ ++ +  AK + +
Sbjct: 531 TRRQSEDDAERSHALLLESESLRKELQDKLQAYEERKEALDKKAKEKARKIVEEAKREAE 590

Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN----------TS 666
            ++ +     ++A     + ++KE E     ++EA +  ++ +  E N            
Sbjct: 591 GIIAELREMRKNA-----DQVVKEHE-----LIEARKRLEEATPLENNKVLKKAAQVKAR 640

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           +     G++V V S G +  T++E   + + V VQ G +++++  +++  I   K
Sbjct: 641 AQNLVVGDEVKVLSYGQR-GTLLEKVSNTEWV-VQMGILKMKISDSDLEYIKPEK 693


>gi|261408901|ref|YP_003245142.1| MutS2 family protein [Paenibacillus sp. Y412MC10]
 gi|261285364|gb|ACX67335.1| MutS2 family protein [Paenibacillus sp. Y412MC10]
          Length = 789

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 225/744 (30%), Positives = 362/744 (48%), Gaps = 98/744 (13%)

Query: 17  LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           LE  + LL  T  A  +  ++  P     I DI   L  A  G  L+P E+ A   T+  
Sbjct: 40  LEAVKDLLAATDQAYTVDRLKGNP-SFRGITDINDALKRARIGGTLNPHELLATSNTIHG 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
              + K+   A   D    ++   L  L    +    LE+ I  CID +   +LD AS +
Sbjct: 99  SRRI-KRFIAAIHED----EKIDILFNLSDLISEQKPLEDAIRLCID-ETAEVLDSASAE 152

Query: 135 LELIRAERK----RNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
           L  IR E +    R  E L+S+++ +  A++ Q       LIT R  R  + +KA ++  
Sbjct: 153 LSQIRRELRGGEVRIREKLESMIRSQSVAKMLQ-----DQLITIRGDRFVIPVKAEYRSH 207

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
              GI  + S SGAT F+EP+  V  NN        E  E   IL  LTA++ +    + 
Sbjct: 208 F-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRMREEREIEVILQKLTAQVGEQAELLS 266

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
             +D + ++D  FA+A  A  M    P ++ + ++           +HPL+         
Sbjct: 267 IDVDLIGQLDFIFAKARLAHVMKASLPRMNDRGYIKLRRG------RHPLI--------- 311

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                  P                   +D  VP+D+++      +++TGPNTGGKT ++K
Sbjct: 312 -------P-------------------TDQVVPLDVELGNSYTSIIVTGPNTGGKTVTLK 345

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+GL +LM+ +GL++PA+   ++  FD I ADIGD QS+EQ+LSTFS H++ I+ IL  +
Sbjct: 346 TIGLLNLMAMSGLFIPAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRILSQM 405

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFEN 488
           + +SLVL+DE+G+GTDP+EG ALA SIL+++  R+G  ++ TTHY++L     +     N
Sbjct: 406 TPKSLVLLDEVGAGTDPAEGSALAISILEHIH-RMGCRMIATTHYSELKAYAYERKGVIN 464

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF + TL PTYR+L G  G SNA  IA+ +G    I++ A+  V     + +  R  
Sbjct: 465 ASMEFDINTLSPTYRLLVGVPGRSNAFAIAERLGLPGSILEFARGEV-----KEEDQRVE 519

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
            +  SL E R   E +   A  +  E+ +L +  + E + L+ +   L  K   + +Q +
Sbjct: 520 HMIASLEENRHTAEVEREKAEQVRKEMEELRQRHQQELQKLEEQKDKLVDKARAEARQIV 579

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS-- 666
           + A+ + + ++ D    LR  + +E  S +KE +     ++ A +  DD    +   +  
Sbjct: 580 DKARSEAEEIIAD----LRKIAQEEGAS-VKEHK-----LIAARKRLDDAEPQQGKKTGG 629

Query: 667 --------SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
                   S  P  G++V V SL  K   VVE+ G  + V VQ G M+++V  +++  + 
Sbjct: 630 QRSAKQQRSIEP--GDEVRVYSLNQK-GHVVEMSGSKEAV-VQLGIMKMKVALDDLELLS 685

Query: 719 NSKRKNAANP--APRLRKQVCTCT 740
           N     AAN   AP+    V   T
Sbjct: 686 NP----AANAKQAPKQHATVLKRT 705


>gi|374992901|ref|YP_004968400.1| MutS2 family protein [Desulfosporosinus orientis DSM 765]
 gi|357211267|gb|AET65885.1| MutS2 family protein [Desulfosporosinus orientis DSM 765]
          Length = 787

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 204/695 (29%), Positives = 333/695 (47%), Gaps = 76/695 (10%)

Query: 24  LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           L +T  A  +M+  PL  +   ++I   L   + G ++   E+  +R TLR      + L
Sbjct: 49  LQKTEEAKNLMRGNPLFSVRGAKEIRAYLERCLRGGVVHGEELLEIRDTLRVGRKTKQYL 108

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRA 140
            E  E        YS L +++        LE++I  CI  D     + D AS +L  +R 
Sbjct: 109 QEFRE-------SYSGLWDIVLPIESQKSLEDEISRCISEDGN---VADNASPELAELRR 158

Query: 141 E----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
                + R  E+L+  L+    Q      +  P+IT+R  R  + IK  ++   P GI  
Sbjct: 159 SINRLQNRIRESLEGTLRNPVYQKM----LQDPIITQRSDRYVIPIKQEYRGSFP-GIVH 213

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP   V+  N    +   E  E   IL +L+A+I     EI  L + + 
Sbjct: 214 DQSASGATLFIEPMPVVQLGNELREVILKEHREVQRILQMLSAQIEGRADEIADLHEALA 273

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           ++DL  A+A  +  M+   P L +   +    +      +HPL                 
Sbjct: 274 QLDLVIAKAHLSLDMNAGSPELVTGQQLKLVQA------RHPL----------------- 310

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                              IS   VP+ +++  +   +VITGPNTGGKT ++K +GL + 
Sbjct: 311 -------------------ISGRVVPLSVELGIDFDTLVITGPNTGGKTVALKAVGLMAA 351

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++ GL +PA++  ++  F  + ADIGD QS+EQ+LSTFSGH+  IVDI+      SLVL
Sbjct: 352 MNQCGLQIPAESESKMGVFTQLFADIGDEQSVEQSLSTFSGHMKNIVDIINRADERSLVL 411

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
           +DE+G+GTDP+EG ALA  IL  L +R    + TTHY  L     +  R +NA+ EF  E
Sbjct: 412 LDEVGAGTDPTEGAALAMGILAELHERGCRTISTTHYGALKTFAYETPRVKNASVEFDTE 471

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TLRPTYR+L G  G SNA  IA  +G    ++ +A   V     ER+    ++L ++L E
Sbjct: 472 TLRPTYRLLIGIPGKSNAFTIAGRLGLSEGVLAKANTFV----TEREMQ-VADLIENLGE 526

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
            RR++E +   A +    +    + +E+++  LD     L A    +  + +  AK + +
Sbjct: 527 TRREIEIEKLKAETGRQAVEKQSKALEEKSNRLDEEVEILLALARDEASELVREAKREAE 586

Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ--FGE 674
            ++++ ++ L+  +  + +  I+++      I  + + D    +  T       Q   G+
Sbjct: 587 ALIEELKSALKKENKQQQD--IEKARQGFRKI--SAKLDQGRQIKRTGGELTADQIMLGQ 642

Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
            V++  +  K   VV++P  +  V VQ G M+V V
Sbjct: 643 TVYMTKVKQK-GQVVKLPNANGEVQVQAGIMKVMV 676


>gi|167629882|ref|YP_001680381.1| muts2 family protein [Heliobacterium modesticaldum Ice1]
 gi|167592622|gb|ABZ84370.1| muts2 family protein [Heliobacterium modesticaldum Ice1]
          Length = 796

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 175/528 (33%), Positives = 272/528 (51%), Gaps = 53/528 (10%)

Query: 12  PFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
           P GK L + Q+ L++T+ A  +++ +P + L+   DI   L     G +L  +E+  V  
Sbjct: 38  PKGK-LWQVQEGLSETTEAKEVLRLRPNVPLAAFHDIRPHLRKTAVGGILEAAELQQVAA 96

Query: 71  TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
            LR    V   L    E  GD  +    L  L +      E E +I  CI  +  +  D 
Sbjct: 97  ALRISRQVRAFLL-GDEKKGDDKKSTPILTALAEGLGVYREAETEIDRCIVGEGEVADDA 155

Query: 131 ASEDLELIRAER---KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
           + E L++ R  +    R  E LD+L++    Q +    +   L+T R  R  V +++ ++
Sbjct: 156 SPELLKIRRTMKTIQNRVREKLDALIRNPDTQKY----LQDALVTVRGDRYVVPVRSEYR 211

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +P G+  + S+SGAT F+EP   VE NN   R   +E  E   IL  L+  +AK   +
Sbjct: 212 SQIP-GLIHDQSASGATVFIEPMAVVELNNELKRNQAAERTEIIRILRDLSLLVAKDAED 270

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           I   ++ +  +D  FA+   +  MD   P +++Q        + I   +HPL+ G     
Sbjct: 271 IGVSLEVLARLDFIFAKGKLSARMDAGEPAVNTQG------KLKIRQGRHPLIAGKV--- 321

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                                            VP+ I++      +VITGPNTGGKT +
Sbjct: 322 ---------------------------------VPVTIELGHAFDTLVITGPNTGGKTVT 348

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL +LM+++GL++PA+    L  F+ I  DIGD QS+EQ+LSTFS H++ IV IL+
Sbjct: 349 LKTVGLLTLMAQSGLHVPAEADTELSLFEHIFVDIGDEQSIEQSLSTFSSHMTNIVGILQ 408

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
            V   SLVL+DE+G+GTDP+EG ALA +I+++L  R    + TTHY++L        R E
Sbjct: 409 EVGPSSLVLLDELGAGTDPTEGAALAQAIMEHLLARGAKTIATTHYSELKAFAYSHDRVE 468

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           NA+ EF +ETLRPTYR+L G  G SNA  I+  +G    +++R++ L+
Sbjct: 469 NASVEFDVETLRPTYRLLIGRPGRSNAFEISLRLGLREDVVKRSRSLL 516


>gi|420198949|ref|ZP_14704633.1| MutS2 family protein [Staphylococcus epidermidis NIHLM031]
 gi|394272635|gb|EJE17085.1| MutS2 family protein [Staphylococcus epidermidis NIHLM031]
          Length = 782

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 209/686 (30%), Positives = 339/686 (49%), Gaps = 91/686 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ +E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  ++ +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P          D +I +    HPLL            +N+     DVE            
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF +ETL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++        +   + + +SL +  ++++ Q        R A
Sbjct: 494 DISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELDRLVREA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
              H  +   Y++ ++  K L   A   K K  Q+V+     A  + D ++++  N LRD
Sbjct: 549 QQTHDALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               E    +KE E     I +  + DD + V          ++     G++V V S G 
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV 709
           K   V+E+ GD++ V VQ G +++++
Sbjct: 653 K-GEVLELVGDEEAV-VQMGIIKMKL 676


>gi|291544279|emb|CBL17388.1| MutS2 family protein [Ruminococcus champanellensis 18P13]
          Length = 793

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 209/704 (29%), Positives = 342/704 (48%), Gaps = 70/704 (9%)

Query: 21  QKLLNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV- 78
           Q+LL  T  AL + +Q        +ED+   L  A SG  +S  E+ +V R L  + ++ 
Sbjct: 43  QQLLGMTEDALQLSIQYGTPPFYQMEDVCAPLLRAKSGSRISLRELLSVARLLNQIQSLD 102

Query: 79  -WKKLTEAAELDGDSL-QRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
            W    E +E     L  R +P   L          EE+I       L  I  + ++  +
Sbjct: 103 DWYCHCENSETSLAYLFSRLAPNPALRDKLERSILSEEEIADGASTALASIRRKIAQSGQ 162

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            +R       + LD +++  + Q +    + + ++T R  R  + +KA H+  +  G+  
Sbjct: 163 KLR-------DTLDKMIRSASMQKY----LQESIVTLRDGRYVLPVKAEHRGDV-QGLIH 210

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRV 255
           + S++G TYF+EP   VE NN ++RL  S+  EE   I++ L AE       +       
Sbjct: 211 DTSATGQTYFIEPIAIVEANN-DIRLLESQEQEEIERIITNLCAECGAYADVLIENYHVC 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            E++L FA+A  A  M    P L+       D ++ ++  +HPLL               
Sbjct: 270 AELNLYFAKANLAAKMKATLPQLTD------DGAVVLKKARHPLL--------------- 308

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
           +P K                     VPID+ +  E + ++ITGPNTGGKT ++KT+GL  
Sbjct: 309 DPAKV--------------------VPIDVTLGREYQALIITGPNTGGKTVALKTVGLLC 348

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
            M+  GL +PA +   +  F  IL DIGD QS+EQNLSTFS H + +++IL+    +SLV
Sbjct: 349 AMAMCGLLIPAGDGSSVSVFSHILVDIGDAQSIEQNLSTFSAHTNHVIEILKTADAQSLV 408

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L+DE+GSGTDP EG ALA S+++ L+ +    + TTHY +L     +    ENA+ EF L
Sbjct: 409 LLDELGSGTDPVEGAALAVSVIEQLKRQGAKLMTTTHYQELKLYAIETPDVENASCEFDL 468

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
           ETL+PTYR+L GS G SNA  I++ +G   +II  A+ LV       +Q R   + + L 
Sbjct: 469 ETLQPTYRLLIGSPGKSNAFAISEHLGMPPQIIAYAKTLV-----STEQTRFESVIEKLE 523

Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
             R +L++Q +       E     + + ++ K L++       +  Q   Q +   K++ 
Sbjct: 524 AARAELDTQNQQLRQARLEAQAHEQALREQLKQLEQEKDAALEQARQSAMQIIENTKIES 583

Query: 616 DTVVQDFEN----QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ 671
           + ++ + E     + R+  +D ++ L   ++++ A + +A  P     + E        +
Sbjct: 584 NRLIDELEQLRHEKDRETFSDRVSQLKSRTKNSFARMHDAANPVQQ-RMQEQYKLPRPLK 642

Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
            G+ V+V  + DK  TV+  P   + V VQ G M+ +VK  N+R
Sbjct: 643 KGDTVYVTDI-DKQGTVLAEPDSSNMVFVQIGIMKTKVKLENLR 685


>gi|420177446|ref|ZP_14683782.1| MutS2 family protein [Staphylococcus epidermidis NIHLM057]
 gi|420180254|ref|ZP_14686509.1| MutS2 family protein [Staphylococcus epidermidis NIHLM053]
 gi|394247830|gb|EJD93072.1| MutS2 family protein [Staphylococcus epidermidis NIHLM057]
 gi|394251293|gb|EJD96392.1| MutS2 family protein [Staphylococcus epidermidis NIHLM053]
          Length = 782

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 209/686 (30%), Positives = 339/686 (49%), Gaps = 91/686 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ +E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  ++ +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P          D +I +    HPLL            +N+     DVE            
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF +ETL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++        +   + + +SL +  ++++ Q        R A
Sbjct: 494 DISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELDRLVREA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
              H  +   Y++ ++  K L   A   K K  Q+V+     A  + D ++++  N LRD
Sbjct: 549 QQTHDALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               E    +KE E     I +  + DD + V          ++     G++V V S G 
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV 709
           K   V+E+ GD++ V VQ G +++++
Sbjct: 653 K-GEVLELVGDEEAV-VQMGIIKMKL 676


>gi|423719024|ref|ZP_17693206.1| DNA mismatch repair ATPase, mutS family [Geobacillus
           thermoglucosidans TNO-09.020]
 gi|383367927|gb|EID45202.1| DNA mismatch repair ATPase, mutS family [Geobacillus
           thermoglucosidans TNO-09.020]
          Length = 784

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 210/708 (29%), Positives = 342/708 (48%), Gaps = 71/708 (10%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           Q+  ++ +AAL +    PL    I DI   L  A  G  LSP E+  +  T+ A     +
Sbjct: 47  QEETDEAAAALRLRGHVPL--GGIVDIRASLKRAKIGGTLSPHELLDIASTISAS----R 100

Query: 81  KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
           +L +  E   +  + +  L    +    L E+++ I  CID    + LD ASE L  IR 
Sbjct: 101 QLKQFIESLHEEKEEFPHLAGYAEKLVALPEVQQAIERCIDDHGEV-LDHASERLRSIRQ 159

Query: 141 ERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
           + +    R  E L+S+++  +AQ      +   +IT R  R  + +K  ++     GI  
Sbjct: 160 QLRTTEARVREKLESIIRSPSAQKM----LSDAIITIRNDRYVIPVKQEYRGAY-GGIVH 214

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP+  VE NN        E  E   IL+ LT  +A     +   +  + 
Sbjct: 215 DQSASGATLFIEPQAVVELNNQLQEARVKEKREIERILTELTGIVAGHAEALLENVGILA 274

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           ++D  FA+A +A  +    P L+ + ++    +      +HPL+   ++           
Sbjct: 275 QLDFIFAKAKYANKLKATKPALNDRGYIRLLQA------RHPLIDQEAV----------- 317

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                                   VP DI++  +   +VITGPNTGGKT ++KT+GL +L
Sbjct: 318 ------------------------VPNDIELGKDYTTIVITGPNTGGKTVTLKTIGLLTL 353

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++AGL++PA +   L  F  I ADIGD QS+EQ+LSTFS H+  IV+IL  V  ESLVL
Sbjct: 354 MAQAGLFIPALDGSELAVFRSIYADIGDEQSIEQSLSTFSSHMVNIVEILRDVDHESLVL 413

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA +IL  +  R    V TTHY +L           NA+ EF  E
Sbjct: 414 FDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRDGVINASVEFDTE 473

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TLRPTY++L G  G SNA  I+K +G D +II+RA     +L    + +    +  SL +
Sbjct: 474 TLRPTYKLLIGIPGRSNAFEISKRLGLDERIIERA-----KLHISAESNNVENMIASLEQ 528

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
            +++ E + + A     E   L R+ E + ++L  +   +  +  ++    +  ++ + +
Sbjct: 529 SKKRAEEELKRAEEARMEAEQLRRDWEQKWEELHEKREEIIEEAKRKAADIVRSSQQKAE 588

Query: 617 TVVQDFENQLRDASADEINSLIKESE--SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
            ++ +     ++  A+     IKE E   A   + EA    +         +  + Q G+
Sbjct: 589 RIIHELRRMQQEKQAE-----IKEHELIEAKKRLQEAMPTLEKKKKERKKQAIHSFQPGD 643

Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           +V V SL  K   V +V   DD   VQ G +++++ + ++  I ++ +
Sbjct: 644 EVKVISLNQKGYLVEKV--SDDEWQVQLGILKMKINERDLEYIGSAPK 689


>gi|153932430|ref|YP_001385445.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum A str. ATCC 19397]
 gi|153936995|ref|YP_001388852.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum A str. Hall]
 gi|229486367|sp|A7FY72.1|MUTS2_CLOB1 RecName: Full=MutS2 protein
 gi|152928474|gb|ABS33974.1| MutS2 family protein [Clostridium botulinum A str. ATCC 19397]
 gi|152932909|gb|ABS38408.1| MutS2 family protein [Clostridium botulinum A str. Hall]
          Length = 788

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 188/563 (33%), Positives = 293/563 (52%), Gaps = 68/563 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           S+ E ++ L +T  A  ++ ++   P +   + DI   ++ A  G  L P ++  +   L
Sbjct: 39  SMYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKGSALLPGQLLKIAAVL 96

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
           R      + +    E +      Y  L  + +    L ++EE+I   I+ +  I  DRAS
Sbjct: 97  RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEIA-DRAS 150

Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L  IR   +++N    + ++SL++  ++ +       + + T R  R  + +KA HK 
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL++L+A+I  +   +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           K   + V E+D  FA+A FA   +  CP ++ +  V       IEG +HPL         
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                        ++  E+             VPI +K+  E   ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL  LM+ +GL +PA+ +  + +F+ + ADIGD QS+EQ+LSTFS H+  IV+I++ 
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
               SLVL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     +    EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALRKEGVEN 462

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETLRPTYR+L G  G SNA  I+K +G    II  A++ +       +  R  
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517

Query: 549 ELYQSLMEERRKLESQARTAASL 571
           EL Q+L E+  K +  AR A +L
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENL 540


>gi|8809580|dbj|BAA97131.1| DNA mismatch repair protein MutS2-like [Arabidopsis thaliana]
          Length = 795

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 240/786 (30%), Positives = 369/786 (46%), Gaps = 136/786 (17%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIED--IAGILNSAVS 56
           +G    +K      +S  ES KLL++T AA+ M++  S  LDLS+I    +   +  A  
Sbjct: 72  LGREATKKKLWSLDQSFSESLKLLDETDAAIKMLEHGSFCLDLSSIHISLVESGIRHAKR 131

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLK----NCNFLTEL 112
              L   +   V   LR   N+   L  A + DGD  +R+ PL EL+     N +F+  +
Sbjct: 132 RLSLRADQALEVASLLRFFENLQLDLKAAIKQDGDWYKRFMPLSELIVHPVINRSFVKLV 191

Query: 113 EEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
           E+     ID     I D AS  L   R  R+R ++ L+  L+++   I ++   D+ ++ 
Sbjct: 192 EQ----VIDPDG-TIKDSASSAL---RQSRER-VQTLERKLQQLLDAIIRSQKDDESVMI 242

Query: 173 KRR------SRMCV-----------GIKASHKYL----LPDGIALNVSSSGATYFMEPKG 211
           K +       R C+           G+  S  Y     L D +    S SG     EP  
Sbjct: 243 KFQLAAEIDGRWCIQMSSNQLTSVNGLLLSSVYFQVLSLEDNMCF--SGSGGGTAAEPIA 300

Query: 212 AVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
           AV  N+ +++ + + +A+ E  ILS+LT +I                     ARA +++ 
Sbjct: 301 AVSMND-DLQSARASVAKAEAEILSMLTEKIN--------------------ARATYSRA 339

Query: 271 MDGVCP--ILSSQSHVSFDSS------INIEGIK---------------HPLLLGSSLRS 307
             G  P   L  +  V   S+      IN+   K               HPLLL    + 
Sbjct: 340 YGGAHPDIYLPPEDEVESLSAGENSPDINLPSEKPLSKKEWLLYLPRCYHPLLLYQHKKG 399

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
           +          K        T  ++  G    P+P D ++   TRV+VITGPNTGGKT  
Sbjct: 400 IRKTRETVKFHK--------TADTVLSGAP--PIPADFQISKGTRVLVITGPNTGGKTIC 449

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +K++GLA++M+K+GLY+ A    R+PWFD I ADIGD QSL Q+LSTFSGH+ +I +IL 
Sbjct: 450 LKSVGLAAMMAKSGLYVLATESARIPWFDNIYADIGDEQSLLQSLSTFSGHLKQISEILS 509

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRF 486
             +  SLVL+DE+G+GT+P EG AL  +IL+   +    L + TTH+ +L  LK  ++ F
Sbjct: 510 HSTSRSLVLLDEVGAGTNPLEGAALGMAILESFAESGSLLTMATTHHGELKTLKYSNSAF 569

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ-- 544
           ENA  EF    L+PTY+ILWG  G SNA+NIA  +G    II+ A++L      E  +  
Sbjct: 570 ENACMEFDDLNLKPTYKILWGVPGRSNAINIADRLGLPCDIIESARELYGSASAEINEVI 629

Query: 545 ---HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
               R  + YQ L+ E R      R +  LH  ++   + I D +            KE 
Sbjct: 630 LDMERYKQEYQRLLNESRVY---IRLSRELHENLLTAQKNINDHS-----------TKER 675

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH---RPDDDF 658
           ++++QEL  A     + ++    Q R ++        K S+S +A  ++       D+D 
Sbjct: 676 RKMRQELTQAGSMTRSTLRRTLQQFRSSAG-------KSSQSKVATQLQTKVKTTKDEDN 728

Query: 659 SVSETNT----------SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
            +  ++           +   P+ G  V V SLG K ATV++V      +LVQ G M+++
Sbjct: 729 GIRSSSVVERRPLPEAAAQKVPEVGSSVFVSSLGKK-ATVLKVEHSKKEILVQVGIMKMK 787

Query: 709 VKKNNI 714
           VK  ++
Sbjct: 788 VKLTDV 793


>gi|331083698|ref|ZP_08332809.1| hypothetical protein HMPREF0992_01733 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330403909|gb|EGG83461.1| hypothetical protein HMPREF0992_01733 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 792

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 217/721 (30%), Positives = 357/721 (49%), Gaps = 92/721 (12%)

Query: 16  SLEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           +L E + +  +T+ ALA + Q   L    ++DI G L     G  L   E+ ++   L  
Sbjct: 39  NLNEIEIMQQETADALARIYQKGSLSFGGVKDIRGSLKRLEIGSTLGTGELLSLCSLLEN 98

Query: 75  VN--NVWKKLTEAAE----LDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI 126
            N    + +   A E    LDG  + LQ  +PL   ++ C  L+E E             
Sbjct: 99  TNRAKAYARRENAEEKQDSLDGMFEILQPLTPLALEIRRC-ILSEEE------------- 144

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQI--FQAGG----IDKPLITKRRSRMCV 180
           I D AS  L+ IR    R+M+N +    K+ +Q+  + +G     +   ++T R  R C+
Sbjct: 145 IADDASAGLKQIR----RSMKNTND---KIHSQLSSYVSGSARTYLQDAVVTMRNGRYCI 197

Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
            +KA HK  +P G+  + SS+G+T F+EP   V+ NN    L   E AE   ILS L+  
Sbjct: 198 PVKAEHKGQVP-GMIHDQSSTGSTVFVEPMAIVKLNNDLRELEVKEQAEIEIILSNLSQY 256

Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
            A++   I+  +  + ++D  FARA  A+  +   P  +++        I+++  +HPL+
Sbjct: 257 AAENLEAIEDNLKVMTQLDFIFARALLAKAQNATEPRFNTKG------IIDLKKARHPLI 310

Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
               +                                   VPID+++  +  ++V+TGPN
Sbjct: 311 DKHKV-----------------------------------VPIDVRLGEDFDLLVVTGPN 335

Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
           TGGKT S+KT+GL +LM ++GL++PA ++ RL  F  + ADIGD QS+EQ+LSTFS H++
Sbjct: 336 TGGKTVSLKTIGLLTLMGQSGLHIPAFDNSRLSIFKEVYADIGDEQSIEQSLSTFSSHMT 395

Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
            +V  +E   R+SLVL DE+G+GTDP+EG ALA +IL +L  +    + TTHY++L    
Sbjct: 396 NVVRFIEKADRDSLVLFDELGAGTDPTEGAALAIAILSHLHAQGIRTMATTHYSELKVYA 455

Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
                 ENA+ EF +ETLRPTYR+L G  G SNA  I+  +G    II +A+   E++  
Sbjct: 456 LSTHGVENASCEFDVETLRPTYRLLIGIPGKSNAFAISGKLGLPSYIIDKAK---EQISQ 512

Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
           E +     ++  +L + R+ +E++    A    EI  L  ++E++   L++R   +    
Sbjct: 513 EDESFE--DVLSTLEQSRKTIEAEEAEIARYKTEIESLKTQLEEKQDKLEQRKERILRDA 570

Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAIAAIVEAHRPDDDFS 659
            ++  + L  AK   D  ++ F    +++ SA E    +++  S +   ++         
Sbjct: 571 NEEAHRILREAKEYADQTMKIFNKAGKESMSAKE----LEQKRSELRKKMDTTGKKMALK 626

Query: 660 VSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
             E   S+ T +    G+ V V SL  K  T+   P     V VQ G +R +V  ++++ 
Sbjct: 627 TPEKKKSTLTAKDISLGDAVKVLSLNVK-GTISSKPDAKGMVFVQMGILRSKVHLSDLQL 685

Query: 717 I 717
           I
Sbjct: 686 I 686


>gi|238925261|ref|YP_002938778.1| DNA mismatch repair protein [Eubacterium rectale ATCC 33656]
 gi|259511157|sp|C4ZI07.1|MUTS2_EUBR3 RecName: Full=MutS2 protein
 gi|238876937|gb|ACR76644.1| DNA mismatch repair protein [Eubacterium rectale ATCC 33656]
          Length = 792

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 205/674 (30%), Positives = 323/674 (47%), Gaps = 72/674 (10%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDG--DSLQRYSPLLELL 103
           DI G LN+    +LL    +  V + ++A         +   L G    ++  S L + +
Sbjct: 79  DIGGALNTT---ELLRICSLLEVAKRVKAYGRSAMDNEKQDSLSGLFAGIEPVSALCDEI 135

Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
           K C  L+E E             I D AS +L  IR   +   + + + L K+       
Sbjct: 136 KRC-ILSEEE-------------IADDASPELFKIRKSIRGMNDRIHAQLTKLMNNSTTR 181

Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
             +   ++T R  R C+ +KA  K  +P G+  + SS+G+T F+EP   V  NN    L 
Sbjct: 182 TYLQDAVVTMRDGRYCLPVKAEAKGNVP-GMMHDQSSTGSTLFIEPMAVVNLNNELKELF 240

Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
             E  E   IL+ L+ ++A +   ++   + + E+D  FA+A  A+  +GV P  ++  H
Sbjct: 241 IKEQEEIEKILAALSDKVAMNAAALEQDYEILSELDFIFAKANLAKSYNGVAPDFNTDGH 300

Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
                 INI   +HPLL    +                                   VPI
Sbjct: 301 ------INIRKGRHPLLDAKKV-----------------------------------VPI 319

Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
           D+++  + + ++ITGPNTGGKT S+KT+GL +LM +AGL++PA +  +L  F+ + ADIG
Sbjct: 320 DVRLGEDYKQLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAADRSKLAIFEDVFADIG 379

Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
           D QS+EQ+LSTFS H++ IV ILE     SL L DE+ SGTDP+EG ALA SIL  L   
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVKILEKADDRSLCLFDELCSGTDPTEGAALAISILNRLHQY 439

Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
             + + TTHY++L          ENA  EF++ETL PTYR+L G  G SNA  I+  +G 
Sbjct: 440 GAITMATTHYSELKVYALSTDGVENACCEFNVETLSPTYRLLIGIPGKSNAFAISSKLGL 499

Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 583
           D  II+ A+      R         +L  SL  +R+ +E +     S  AEI  L +++E
Sbjct: 500 DENIIEDAKS-----RINDNDLDFEDLIASLESQRQTIEKEQLEINSYKAEIEKLKKQLE 554

Query: 584 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 643
           ++ + +D+    +  +  ++  + L  AK   D  +++F N+     A  ++ + KE  +
Sbjct: 555 EKNERIDKSKDKILREANEEAYKILQDAKELADKTIRNF-NKYGQGQA-PMSQMEKERSA 612

Query: 644 AIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
               + +  +   D   +    +   P+    G+ V V SL  K  TV  +P     + V
Sbjct: 613 LRDKMNDKEKKLSDIKKNTAKANHKAPKKLRIGDSVLVLSLNLK-GTVHTLPNAKGDLYV 671

Query: 701 QYGKMRVRVKKNNI 714
           Q G +R  V  N++
Sbjct: 672 QMGILRSLVNINDL 685


>gi|384160390|ref|YP_005542463.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           amyloliquefaciens TA208]
 gi|384169470|ref|YP_005550848.1| recombination and DNA strand exchange inhibitor [Bacillus
           amyloliquefaciens XH7]
 gi|328554478|gb|AEB24970.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           amyloliquefaciens TA208]
 gi|341828749|gb|AEK90000.1| recombination and DNA strand exchange inhibitor [Bacillus
           amyloliquefaciens XH7]
          Length = 785

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 214/722 (29%), Positives = 355/722 (49%), Gaps = 79/722 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L + QK L++   A A+M+ +       + DI   L  A  G +L+P+E   +   L AV
Sbjct: 40  LADIQKQLDEVEEASAIMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             +   +++  E DG S+    PL++   +    L +LE +I  CID    + LD AS  
Sbjct: 100 KQMKHFISQMTE-DGVSI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153

Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++   
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT   A+  +EI  
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIVQ 268

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            ++ +  +D  FA+A +A+ M    P ++       D  I ++  +HPLL          
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL---------- 312

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P    V N                   DI++  +   +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYTTIVITGPNTGGKTVTLKT 347

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL ++M++AGL++PA        FD + ADIGD QS+EQ+LSTFS H+  IV IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDHVFADIGDEQSIEQSLSTFSSHMVNIVSILKDVS 407

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETL PTY++L G  G SNA  I++ +G    II +A+  +        +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521

Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
              SL + +++ + +     S+  E   L++E++ +  +L+ +   L  +  Q+  ++L 
Sbjct: 522 MIASLEQSKKRADEELSETESIRKEAEKLHKELQQQIIELNAQKDKLMEEAEQKAAEKLE 581

Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            A  + + ++++    + + R     E+    K    A+ A  ++ +P+           
Sbjct: 582 DAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTE----KKR 637

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN---IRPIPNSKRK 723
              P  G++V V + G K A ++E  G+ +   VQ G ++++VK+ +   ++  P  K++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSAPEPKKE 693

Query: 724 NA 725
            A
Sbjct: 694 KA 695


>gi|182626137|ref|ZP_02953897.1| MutS2 family protein [Clostridium perfringens D str. JGS1721]
 gi|422874800|ref|ZP_16921285.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium perfringens F262]
 gi|177908574|gb|EDT71099.1| MutS2 family protein [Clostridium perfringens D str. JGS1721]
 gi|380304441|gb|EIA16730.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium perfringens F262]
          Length = 786

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 193/594 (32%), Positives = 303/594 (51%), Gaps = 59/594 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           I D AS+ L  IR    R+++  +S ++     I ++    +   L T R  R  + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            +K  +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              IK   + ++E+D  FA+A +   +DG  PI++ +        I++   +HPL+    
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLDGTMPIVNEEG------VIDLMDARHPLI---- 309

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                       P                    D  V  DI +  E   ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KT GL  LM  +GL +PA  +  + +F+ I ADIGD QS+EQ+LSTFS H++ IV 
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           I+E  + +S VL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     K  
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
             ENA+ EF++ETLRPTYR+L G  G SNA  I++ +G    +I+ A+K++  E L+ E 
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
                 +L QSL E+  K E+ AR AA L  +        +++ + ++    ++ A   +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571

Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
           + +Q L+ AK + D ++++  +  R   S+D    L  E       I +A          
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           +        + G +  + S+  K+  V+  P +   V VQ G M++ VK  ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLR 684


>gi|334340999|ref|YP_004545979.1| MutS2 family protein [Desulfotomaculum ruminis DSM 2154]
 gi|334092353|gb|AEG60693.1| MutS2 family protein [Desulfotomaculum ruminis DSM 2154]
          Length = 783

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 204/671 (30%), Positives = 339/671 (50%), Gaps = 78/671 (11%)

Query: 60  LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
           LS  E+ A   TL A   + K  TE  +       RY  L EL +      +LE+ I   
Sbjct: 83  LSAEELLATGETLAAARRIKKFFTEKKD-------RYPLLSELAEAMIHQPQLEKDILRA 135

Query: 120 IDCKLLIILDRASEDLELIRA-ERKRNM--ENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
           I     I  D + E L++ R  +R +N   E ++S+++    Q +    +  P+IT R  
Sbjct: 136 ILPGGEIADDASPELLQIRRGLQRSQNRIRERMESIIRSSENQKY----LQDPIITIRND 191

Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
           R  V +K  ++  +P GI  + S+SGAT F+EP   VE NN   RL  +E  E   IL+ 
Sbjct: 192 RYVVPVKQEYRNQIP-GIVHDQSASGATLFVEPMPVVEANNEVRRLVAAEKQEIQKILAE 250

Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
           L+  +++   E+   +D + ++D   A+A +++ ++   P       +     ++I   +
Sbjct: 251 LSQGVSEISEELTITLDALGQLDFVMAKARYSRQLNAWGP------KIVEGGVMDIRKGR 304

Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
           HPLL   +                                    VP  I +  + R +VI
Sbjct: 305 HPLLPADA------------------------------------VPATISLGKDFRSLVI 328

Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
           TGPNTGGKT ++KT+GL +LM+++GL++PA++   +  F  I ADIGD QS+EQ+LSTFS
Sbjct: 329 TGPNTGGKTVTLKTVGLFTLMTQSGLHIPAESGTEMGVFSKIYADIGDEQSIEQSLSTFS 388

Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
            H++ +VDIL    + SLVL+DE+G+GTDP+EG ALA +IL+ L  R    + TTHY++L
Sbjct: 389 SHMTNLVDILAGAGQGSLVLLDELGAGTDPTEGAALARAILETLFQRGVCTIATTHYSEL 448

Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
                     ENA+ EF +ETLRPTYR+L G  G SNA  I+  +G   +++QRA++ + 
Sbjct: 449 KNYAYTTPGVENASVEFDIETLRPTYRLLIGRPGRSNAFEISARLGLSPEVVQRARQFL- 507

Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE---IMDLYREIEDEAKDLDRRA 593
                 +Q   ++L   L + ++  E +   A +L  +   + + YR++E + ++   + 
Sbjct: 508 ----TTEQVEVADLINKLEQTQQAAEREREEAETLRRDSEKLKERYRQLEQQLRE---KR 560

Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI---VE 650
             L  K  ++  + +  A+++ D  V++  ++L + +A +  S I+++ + +  +   V 
Sbjct: 561 ESLLEKAQEEAARLVRNARLEADEAVKELRSKLAEENAKDRESAIQQARNKLQRVTSKVA 620

Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
           A  P+    V         P  G+QV +     K A V+ V GD+  V VQ G M++ V 
Sbjct: 621 AKVPER--VVPGEIPRQVKP--GQQVFLPKYNQK-AYVLSVSGDN--VQVQVGIMKMFVP 673

Query: 711 KNNIRPIPNSK 721
              +R +   K
Sbjct: 674 LKELRRVAEEK 684


>gi|332798676|ref|YP_004460175.1| MutS2 protein [Tepidanaerobacter acetatoxydans Re1]
 gi|332696411|gb|AEE90868.1| MutS2 protein [Tepidanaerobacter acetatoxydans Re1]
          Length = 787

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 167/519 (32%), Positives = 278/519 (53%), Gaps = 61/519 (11%)

Query: 23  LLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA---VNNV 78
           L  +TS  LA++ S   + L  I+DI   LN A  G +LSP E+  +  T+RA   + + 
Sbjct: 46  LQRETSEGLALLNSGIKISLRGIKDIRNSLNLAKLGSVLSPGELLDIASTMRAARLIKSA 105

Query: 79  WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLE 136
           W +   A     DS+     + E++   +    LEEKI   I  D +   I D AS  L 
Sbjct: 106 WNEKKPA-----DSV----IINEIVNGLHIFQSLEEKIEKAIVSDEE---IADNASPKLS 153

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            IR ++K   +++ + L ++ +  +    +  P++T R+ R  V +K   +  +  G+  
Sbjct: 154 SIRRQKKNLAQSIRNKLNEIISSPYYQKALQDPIVTVRQDRYVVPVKQEFRGSI-QGVIH 212

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT ++EP   ++ NN   +L   E  E   IL   + ++ ++   I   +  + 
Sbjct: 213 DQSASGATLYIEPMAVMQMNNELRQLEIEEKKEIERILWDFSKKVQENYDFIHDTLYGLA 272

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
            +D   A+AG++  + G  PI +++ +++      I+G +HPLL G              
Sbjct: 273 HLDFIMAKAGYSLDIKGTEPIFNNRGYINI-----IQG-RHPLLKGEV------------ 314

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                                   VP+D+ +  E  +++ITGPNTGGKT ++KT+GL  L
Sbjct: 315 ------------------------VPLDVYLGDEFNILIITGPNTGGKTVALKTVGLFIL 350

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+++GL+LPA+    +  F+ + ADIGD QS+EQ+LSTFS H+  I +IL+L +++SL++
Sbjct: 351 MAQSGLHLPAQEGTEVSIFEDVFADIGDEQSIEQSLSTFSSHMKNIKEILDLATKDSLII 410

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
           +DE+G+GTDP+EG ALA +IL YL ++    + TTHY++L          ENA+ EF ++
Sbjct: 411 LDELGAGTDPTEGAALAMAILNYLYEKGSRVLATTHYSELKTFAFSKEGVENASMEFDIQ 470

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           TL PTYR+  G  G SNA  IAK +G  ++++   + L+
Sbjct: 471 TLSPTYRLTIGIPGKSNAFEIAKRLGLKQEVVDLGKSLM 509


>gi|315658547|ref|ZP_07911419.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
           M23590]
 gi|315496876|gb|EFU85199.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
           M23590]
          Length = 783

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 207/707 (29%), Positives = 343/707 (48%), Gaps = 84/707 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +L+ A  G +L+ +E+  ++R ++ V N +K       L+ D  Q Y PLL
Sbjct: 65  LSGLSKVSPLLHRAKIGSVLNVTELNQLKRLIQ-VQNQFKTFYNQL-LEDDEQQVYYPLL 122

Query: 101 -ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
            + +     LT+L ++I    D   L   D AS +L+ IR++     +R  +NLD ++K 
Sbjct: 123 HDNMMRLPVLTDLFQEINDKCDTHDL--YDHASYELQGIRSKISSTTQRIRQNLDRIVKN 180

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
            + Q      +   ++T R  R  + +KA ++     GI  + S+SG T ++EP   VE 
Sbjct: 181 QSNQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEM 235

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN   RL N E  E   IL++LT  +A+   +     + +  +D   A+A +A  + G  
Sbjct: 236 NNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKARYASAIKGTK 295

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P       +   ++       HPLL            +N+     DVE            
Sbjct: 296 PTFYEARTIYLPNAF------HPLL------DKETVVANTIEFADDVE------------ 331

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 332 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 374

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H+  IV IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 375 HDVFCDIGDEQSIEQSLSTFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGAALAMS 434

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 435 ILDYTRALGALVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 494

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
           +I+K +G +  II +A+ ++     E           +LM E   LE  A+   +   E+
Sbjct: 495 DISKKLGLNLSIINKAKTMIGTDEQEI----------NLMIE--SLEKNAKRVDTQRIEL 542

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA--DE 633
             L +E +    DL+++    +A E Q ++   + A  ++    ++ +  L++     D+
Sbjct: 543 DHLLKEAQQTHDDLEKQYNQFQAYEKQLIEDAKDKANQRVKAATKEADEILKELRTLRDQ 602

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
             + +KE E     I +  + D+ +            ++     G++V V S G K   V
Sbjct: 603 KGADVKEHE----LIDKKKQLDNQYEAKSIKQQVQKQKYDKIVAGDEVKVLSYGQK-GEV 657

Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 735
           +E+ G+D+ V VQ G +++++    I  +  +K+K    P   +++Q
Sbjct: 658 LELVGNDEAV-VQMGIIKMKLP---IEDLEKTKKKQ-EKPTKMIKRQ 699


>gi|373857569|ref|ZP_09600310.1| MutS2 family protein [Bacillus sp. 1NLA3E]
 gi|372452701|gb|EHP26171.1| MutS2 family protein [Bacillus sp. 1NLA3E]
          Length = 785

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 214/708 (30%), Positives = 333/708 (47%), Gaps = 82/708 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LS +E+  V  T+     + + + + AE D         L+
Sbjct: 65  LGGIFDIRAHIKRAAIGGMLSSNELMQVASTVHVSRQMKRFIEDVAEEDVS----IPILV 120

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSLLKKV 156
           E  +    L ELE+ I   ID    + LD AS  L      +R++  R  E LDS+++  
Sbjct: 121 EFSEQIIVLAELEQSIKMAIDDNGEV-LDGASATLRSLRHQLRSKEARVREKLDSMIRSS 179

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
            AQ      +   LIT R  R  + +K  ++     GI  + SSSG T F+EP+  VE N
Sbjct: 180 NAQKM----LSDALITIRNDRFVLPVKQEYRSHY-GGIIHDQSSSGQTLFIEPQSIVELN 234

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N    +   E  E   IL  LTA +A+ + ++  ++  + E+D  FA+A +A+ +    P
Sbjct: 235 NELQGIRLKEEQEIQRILIELTAHVAEYQEDLATVVVVLTELDFMFAKARYAKRIKASKP 294

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
            ++ +  +  + +      +HPL+                P+   V N            
Sbjct: 295 TMNHEGRIFLNKA------RHPLI----------------PIDEVVAN------------ 320

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
                  DI +  +   +VITGPNTGGKT ++KT+GL +LM++AGL +PA +   +  FD
Sbjct: 321 -------DITIGIDFSTIVITGPNTGGKTVTLKTVGLCTLMAQAGLQVPAFDGSEMAVFD 373

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            + ADIGD QS+EQ+LSTFS H+  IVDIL+ V   SLVL DE+G+GTDP EG ALA SI
Sbjct: 374 EVYADIGDEQSIEQSLSTFSSHMVNIVDILKKVDSNSLVLFDELGAGTDPQEGAALAISI 433

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L  +  R    + TTHY +L           NA+ EF +ETL PTY++L G  G SNA  
Sbjct: 434 LDEVYKRSAKVIATTHYPELKAYGYNREGVSNASVEFDVETLSPTYKLLIGVPGRSNAFE 493

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I++ +G D  +I+ A+  V         ++   +  SL   RR+ E +      L     
Sbjct: 494 ISRKLGLDESVIENARSHV-----SADTNQIENMISSLEASRRQAEIEQEETNELLRNAE 548

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 636
            L+  ++ E      R   +  K   +  + +  AK + + V++D      +  A+    
Sbjct: 549 KLHDNLQKEMIAFYDRKDQMFEKAEDEALEIVEKAKSEAEGVIRDLRKMRIEKQAE---- 604

Query: 637 LIKESESAIAAI-VEAHRPDDDFSVS----ETNTSSFTPQFGEQVHVKSLGDKLATVVEV 691
            +KE E   A   +EA  P      S     T   SFT   G++V V S G K   + + 
Sbjct: 605 -VKEHELIDAKKRLEAAAPTKTVKRSPVKQATKKHSFTA--GDEVKVVSFGQKGLLINKT 661

Query: 692 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTC 739
              D    VQ G ++++V++ ++  I         +PAP+ ++ + T 
Sbjct: 662 S--DHGWQVQIGILKMKVEEEDLIYI--------GSPAPQEKRHLATV 699


>gi|284048620|ref|YP_003398959.1| MutS2 family protein [Acidaminococcus fermentans DSM 20731]
 gi|283952841|gb|ADB47644.1| MutS2 family protein [Acidaminococcus fermentans DSM 20731]
          Length = 790

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 204/694 (29%), Positives = 339/694 (48%), Gaps = 87/694 (12%)

Query: 26  QTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
           +T+ A+ ++ + + L L  + DI+ ++     G +L P +  A+  T+  + ++ + L E
Sbjct: 49  ETAEAVQLLDEGKRLPLGGMTDISPLVKRTRVGSILEPEDFKAIGDTIDGLRHLKQFLLE 108

Query: 85  AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----A 140
             E +  +L+ Y P L         + L +++   +D K   I D AS  L+ +R    A
Sbjct: 109 DTE-NAPALRDYGPQL------GDFSRLSKQLSSALDEKG-NIKDNASVKLQGLRTGILA 160

Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
            + R  + L+SLL     Q +        L+T R  R  + IK  ++   P G+  + S+
Sbjct: 161 AKNRVKDKLNSLLHDPNNQKY----FQDALVTMREDRYVIPIKQEYRLNFP-GVVHDQSA 215

Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
           SGAT F+EP   V  NN   +    E AE   IL  LT  +      I   +D   ++DL
Sbjct: 216 SGATLFVEPMAVVNLNNDIKKYRLEEQAEVERILRTLTGHVGSEAENILSSLDIAAQVDL 275

Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
             A+A  AQ +    P++  Q  +           +HPLL                    
Sbjct: 276 IGAKAALAQKLHCCRPMMILQQRLRITQG------RHPLL-------------------- 309

Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
           D E                 VP+DI +  +   ++ITGPNTGGKT ++KT+G+ +LM++A
Sbjct: 310 DQEKV---------------VPLDINLGDDFTTLLITGPNTGGKTVALKTVGVFALMAQA 354

Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
           G+++PA+    LP F  + ADIGD QS+EQ+LSTFSGH+  ++ IL+ V    LVL+DE+
Sbjct: 355 GMFVPAR-EAILPVFGGVYADIGDEQSIEQSLSTFSGHMKNMISILDEVREGDLVLVDEV 413

Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
             GTDP+EG ALA ++++YL  +  L ++TTHY++L     +    ENA+ EF  ETLRP
Sbjct: 414 CVGTDPTEGAALAMAMIEYLYKKKVLTIMTTHYSELKTFAYEHEGMENASVEFDPETLRP 473

Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLMEERR 559
           TY++L G  G SNA  I+K +G  + I+  A+  +       + H   E + Q+L  ERR
Sbjct: 474 TYKLLMGVPGSSNAFYISKRLGLPQGILDEARTFIG------EGHSNMERVLQNLEGERR 527

Query: 560 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 619
           + ES+    ++L  E   L  E+  + +DL++    +  K  +Q  +    A+ +  +++
Sbjct: 528 EYESRKDEISALQREAEYLKNELTRQKQDLEKSRNAILRKAREQADELYRNARRESTSIL 587

Query: 620 QDFENQLRDASADEINSLIKESESAIAAIVEAHRP--DDDFSVSET------NTSSFTPQ 671
           ++       A+ D + S        +  + E  R   + +FS+           +S    
Sbjct: 588 KELR-----ANQDMVES------RKVEQLAELSRKVLNKNFSIDGKPMPEGQGLTSGNAA 636

Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
            G++V+VK +G    T+V + G + TV +   KM
Sbjct: 637 VGKKVYVKKIGQS-GTIVALNGKEVTVRIGIMKM 669


>gi|325288446|ref|YP_004264627.1| DNA mismatch repair protein, MutS family [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324963847|gb|ADY54626.1| DNA mismatch repair protein, MutS family [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 793

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 207/716 (28%), Positives = 347/716 (48%), Gaps = 73/716 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           + E +  L +T  A  +++  PL  +   ++I   +     G +L P E+  ++ T+R  
Sbjct: 42  IREVRNRLRETDEAKILLRFNPLFSVRGAKEIRPSVERCARGGILQPEELLEIKDTVRVA 101

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASE 133
             V   LTE      +  + +S L  ++        LE++I  CI  D K   I D+ASE
Sbjct: 102 RQVKNILTEDGTAKSNVAELFS-LRGIVSEVAPQKPLEDEISRCINEDGK---IDDKASE 157

Query: 134 DLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
           DL  IR       +R  + LD +++  A Q      +   +IT R  R  V +K  +   
Sbjct: 158 DLAKIRRMITGIHQRLKDVLDGIMRNPATQKM----LQDRVITTRGDRYVVPVKQEYGSA 213

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
             +GI  + S+SGAT F+EP   V+  N        E  E   IL  LTA +A    EI 
Sbjct: 214 F-NGIVHDQSASGATLFIEPAAVVQLGNELREAVLRENREVQRILQQLTAIVAVKVDEIA 272

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
              + +  +D   A+A  +  M+   P++ ++  +  + +      +HPLL G       
Sbjct: 273 ASFEALARLDFVLAKALLSDKMNAGSPLVLNKPQIKLNKA------RHPLLSGKV----- 321

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                                          VP+ I++  +  ++VITGPNTGGKT ++K
Sbjct: 322 -------------------------------VPLSIELGEDFNILVITGPNTGGKTVTLK 350

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+GL S+M ++GL++PA++  +L  F  I  DIGD QS+EQ+LSTFSGH+  IV I++  
Sbjct: 351 TVGLMSVMMQSGLHIPAESDSKLGVFRKIFIDIGDEQSVEQSLSTFSGHLKNIVGIVKEA 410

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
             +SLVL DEIG+GTDP+EG ALA +I+  L DR    + TTHY  L          ENA
Sbjct: 411 DDKSLVLFDEIGAGTDPAEGAALAMAIISELLDRGCRGIATTHYGTLKTFAYNTAGLENA 470

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF  ETL PTYR++ G  G SNA +IA+ +G  + I+  A+  +     ERQ  + S+
Sbjct: 471 SVEFDPETLSPTYRLMIGIPGRSNAFSIAERLGLQKNILDLAKTYI----SERQM-KVSD 525

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYRE---IEDEAKDLDRRAAHLKAKETQQVQQ 606
           L ++L E +R++E        +  E+  + RE   I ++A+ +D +   +  K  ++  +
Sbjct: 526 LLENLEETQREIEL---GKLKIQEELQKVTRENAQIAEKARLMDEKYEEIVQKAKEEAME 582

Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            +  +K + + V+ + +   ++    +  + I+++   +  + E      + S       
Sbjct: 583 IVRGSKHEAEKVILEIKEAQKEEQKKQ-QAAIEKARQGLKKLSEGLYSGKERSGGNLRPE 641

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
              P  G+ V++ +L  K   V+  P  +  V+VQ G +++ V  + IR I  +++
Sbjct: 642 QVKP--GQLVYLPNLRQK-GQVITKPDHNGEVVVQAGILKISVSISEIRIIDETRK 694


>gi|289551051|ref|YP_003471955.1| recombination inhibitory protein MutS2 [Staphylococcus lugdunensis
           HKU09-01]
 gi|385784672|ref|YP_005760845.1| MutS family DNA mismatch repair protein [Staphylococcus lugdunensis
           N920143]
 gi|418414347|ref|ZP_12987562.1| MutS2 protein [Staphylococcus lugdunensis ACS-027-V-Sch2]
 gi|289180583|gb|ADC87828.1| Recombination inhibitory protein MutS2 [Staphylococcus lugdunensis
           HKU09-01]
 gi|339894928|emb|CCB54231.1| MutS family DNA mismatch repair protein [Staphylococcus lugdunensis
           N920143]
 gi|410876954|gb|EKS24851.1| MutS2 protein [Staphylococcus lugdunensis ACS-027-V-Sch2]
          Length = 783

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 207/707 (29%), Positives = 343/707 (48%), Gaps = 84/707 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +L+ A  G +L+ +E+  ++R ++ V N +K       L+ D  Q Y PLL
Sbjct: 65  LSGLSKVSPLLHRAKIGSVLNVTELNQLKRLIQ-VQNQFKTFYNQL-LEDDEQQVYYPLL 122

Query: 101 -ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
            + +     LT+L ++I    D   L   D AS +L+ IR++     +R  +NLD ++K 
Sbjct: 123 HDNMMRLPVLTDLFQEINDKCDTHDL--YDHASYELQGIRSKISSTTQRIRQNLDRIVKN 180

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
            + Q      +   ++T R  R  + +KA ++     GI  + S+SG T ++EP   VE 
Sbjct: 181 QSNQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEM 235

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN   RL N E  E   IL++LT  +A+   +     + +  +D   A+A +A  + G  
Sbjct: 236 NNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKARYASAIKGTK 295

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P       +   ++       HPLL            +N+     DVE            
Sbjct: 296 PTFYEARTIYLPNAF------HPLL------DKETVVANTIEFADDVE------------ 331

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 332 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 374

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H+  IV IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 375 HDVFCDIGDEQSIEQSLSTFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGAALAMS 434

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 435 ILDYTRALGALVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 494

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
           +I+K +G +  II +A+ ++     E           +LM E   LE  A+   +   E+
Sbjct: 495 DISKKLGLNLSIINKAKTMIGTDEQEI----------NLMIE--SLEKNAKRVDTQRIEL 542

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA--DE 633
             L +E +    DL+++    +A E Q ++   + A  ++    ++ +  L++     D+
Sbjct: 543 DHLLKEAQQTHDDLEKQYNQFQAYEKQLIEDAKDKANQRVKAATKEADEILKELRTLRDQ 602

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
             + +KE E     I +  + D+ +            ++     G++V V S G K   V
Sbjct: 603 KGADVKEHE----LIDKKKQLDNQYEAKSIKQQVQKQKYDKIVAGDEVKVLSYGQK-GEV 657

Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 735
           +E+ G+D+ V VQ G +++++    I  +  +K+K    P   +++Q
Sbjct: 658 LELVGNDEAV-VQMGIIKMKLP---IEDLEKTKKKQ-EKPTKMIKRQ 699


>gi|403237728|ref|ZP_10916314.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. 10403023]
          Length = 786

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 206/713 (28%), Positives = 351/713 (49%), Gaps = 68/713 (9%)

Query: 16  SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           ++EE   L  QT  A  +++ +  + L  + DI   +  A  G  L+  E+  +  T+ A
Sbjct: 39  NVEEVIFLQEQTDEAAKVLRLKGNVPLGGLTDIRAAVKRASIGGALNTLELLDIAGTIYA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
                KK  E    D   L    P+L EL+ +   L ELE+KI  CID    +++D AS+
Sbjct: 99  -GRQMKKFIEGMIEDDIEL----PILAELITSITPLYELEQKIKNCIDDNG-VVMDGASD 152

Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L  IR + +    R  E LD +++  +AQ      +   +IT R  R  + +K  ++  
Sbjct: 153 KLRGIRQQLRSSEARIREKLDHIIRSSSAQ----KTLSDAIITIRNDRYVIPVKQEYRGT 208

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
              GI  + SSSGAT F+EP+  V+ NN+       E  E   IL  L+ E+A     + 
Sbjct: 209 Y-GGIVHDQSSSGATLFIEPQSVVDLNNVLQEARVKEKQEIDRILFELSNEVALETESLY 267

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
             +D + E+D  F +A +++ + G  P ++   +V           +HPL+    +    
Sbjct: 268 QNVDTLGELDFMFTKASYSKKVKGSKPKINGNGYVLIKKG------RHPLIAPKDV---- 317

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                                          VP DI++  +   +VITGPNTGGKT ++K
Sbjct: 318 -------------------------------VPNDIELGKKYTSIVITGPNTGGKTVTLK 346

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+GL ++M+++GL +PA+    +  F+ + ADIGD QS+EQ+LSTFS H+  IVDIL+ V
Sbjct: 347 TIGLLTIMAQSGLQIPAQEESEIAVFESVYADIGDEQSIEQSLSTFSSHMVNIVDILKRV 406

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
              SLVL DE+G+GTDP EG ALA SIL  + +R    + TTHY +L           NA
Sbjct: 407 DSTSLVLFDELGAGTDPQEGAALAISILDEVYNRGARVIATTHYPELKAYGYNREGVINA 466

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF +ETL PTY++L G  G SNA  I+K +G    II  A+  +       + +    
Sbjct: 467 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLSDTIIHAAKSHI-----SSETNTVEN 521

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
           +  SL + ++  E +   A  +  +   L+++++++  + + +   L  K  ++ ++ + 
Sbjct: 522 MIASLEKSKKDAERELDEAEGIRKQAEILHKQLQEQIIEFNEQRDKLYEKAERKAEETIK 581

Query: 610 FAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
            A  + + V++D    +L   S  + + LI+  +    A+ +  +  +  +++       
Sbjct: 582 NATTEAEEVIRDLRKMKLEQQSLVKEHQLIEAKKRLENAVPQTSKKTNKQAIASKAKRKL 641

Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
            P  G++V V SL  K   ++E  G+++   VQ G ++++VK+ ++  I + K
Sbjct: 642 VP--GDEVKVISLNQK-GHLIENTGNNEW-QVQIGILKMKVKEKDLEFIGSPK 690


>gi|375009800|ref|YP_004983433.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
 gi|359288649|gb|AEV20333.1| hypothetical protein GTCCBUS3UF5_30300 [Geobacillus thermoleovorans
           CCB_US3_UF5]
          Length = 784

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 183/528 (34%), Positives = 274/528 (51%), Gaps = 64/528 (12%)

Query: 17  LEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
           LEE    L +T  A A+++     PLD   + +I   L  A  G +LSP E+     TL 
Sbjct: 40  LEEVAAWLEETDEAAAVLRLAGYAPLD--GVVNIRPHLKRAAIGGVLSPQELVETASTLT 97

Query: 74  AVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           A   + + + +  E  G  D L  Y+   EL++    +  LE  I   ID    + LD A
Sbjct: 98  ASRQMKRLIMDLHEEQGGLDRLSIYAD--ELVE----VPALEHDIRRSIDDHGEV-LDAA 150

Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
           S+ L  +R + +    R  E L+S+++  +AQ      +   +IT R  R  + +K  ++
Sbjct: 151 SDRLRSLRGQIRSVETRIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYR 206

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
                GI  + S+SGAT F+EP+  VE NN        E  E   IL  L+A++A+    
Sbjct: 207 SAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEP 265

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           +   ++ +  +D AFA+A +A+ +    P ++++ ++ F  +      +HPLL       
Sbjct: 266 LARAVESLAALDFAFAKAKYARRLQAAKPAVNNRGYLRFVQA------RHPLL------- 312

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                        D E +               VP DI++  +   +VITGPNTGGKT +
Sbjct: 313 -------------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVT 344

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL +LM++AGL++PA +      F  + ADIGD QS+EQ+LSTFS H+  IVDIL 
Sbjct: 345 LKTVGLLTLMAQAGLFIPAADGSEAAVFRAVYADIGDEQSIEQSLSTFSSHMVNIVDILR 404

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
            V  +SLVL DE+G+GTDP EG ALA +IL  +  R    V TTHY +L           
Sbjct: 405 HVDGQSLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVV 464

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           NA+ EF  ETLRPTY++L G  G SNA +I++ +G D +II+RA+  V
Sbjct: 465 NASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV 512


>gi|354580077|ref|ZP_08998982.1| MutS2 family protein [Paenibacillus lactis 154]
 gi|353202508|gb|EHB67957.1| MutS2 family protein [Paenibacillus lactis 154]
          Length = 789

 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 216/735 (29%), Positives = 352/735 (47%), Gaps = 85/735 (11%)

Query: 17  LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           LE+ + LL  T  A  +  ++  P   S + DI   L  A  G  L+P E+ A   T+  
Sbjct: 40  LEDVKHLLAATDQAYTVDRLKGTP-SFSGVTDINDALKRARIGGTLNPHELLATANTILG 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
              + + +          +    P+  L    + ++E   LE+ I  CID    + LD A
Sbjct: 99  SRRIKRFIA--------GIHEDEPIDILFHLSDLISEQKPLEDAIRACIDDSAEV-LDTA 149

Query: 132 SEDLELIRAERK----RNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           S +L  IR E +    R  E L+S+++ +  A++ Q       LIT R  R  + +KA +
Sbjct: 150 SAELAQIRRELRNGEVRIREKLESMIRSQSVAKMLQ-----DQLITIRGDRFVIPVKAEY 204

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           +     GI  + S SGAT F+EP+  V  NN        E  E   IL  LTA++ +   
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRIREEREIEVILQKLTAQVGEQAD 263

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
            +   +D V ++D  FA+A  A  M    P ++ + ++           +HPL+      
Sbjct: 264 VLAIDVDLVGQLDFIFAKARLAHVMKASLPRMNDRGYIKLRKG------RHPLI------ 311

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                     P+                   D  VP+D+++      +++TGPNTGGKT 
Sbjct: 312 ----------PM-------------------DQVVPLDVELGNSYTSIIVTGPNTGGKTV 342

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KT+GL +LM+ +GL++PA+   ++  FD I ADIGD QS+EQ+LSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLNLMAMSGLFIPAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRIL 402

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
             ++ +SLVL+DE+G+GTDP+EG ALA +IL+++       + TTHY++L     +    
Sbjct: 403 TQMTPKSLVLLDEVGAGTDPAEGSALAIAILEHIHSMGCRMIATTHYSELKAYAYERKGI 462

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
            NA+ EF + TL PTYR+L G  G SNA  IA+ +G    I++ A+  V     + +  R
Sbjct: 463 INASMEFDINTLSPTYRLLVGVPGRSNAFAIAERLGLPGSILEFARGEV-----KEEDQR 517

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
              +  SL E R   E +   A  +  E+ +L     +E + L+ +   L  K   + +Q
Sbjct: 518 VEHMIASLEENRHTAEVEREKAEQVRKEMEELRARHREELQRLEDQRDKLVDKARVEAKQ 577

Query: 607 ELNFAKVQIDTVVQDFEN--QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
            ++ A+ + + ++ D     Q   AS  E   +        A   +  RP         +
Sbjct: 578 IVDKARSEAEQIISDLRKLAQEEGASVKEHKLIAARKRLEEAEPEQGKRP----GAQRQS 633

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
               + + G++V V SL  K   VVE+ G  + + VQ G M+++V  +++  + N     
Sbjct: 634 KQQRSIEAGDEVRVYSLNQK-GHVVELAGSKEAI-VQLGIMKMKVGLDDLELLSNP---- 687

Query: 725 AANPAPRLRKQVCTC 739
           AAN A + +KQ  T 
Sbjct: 688 AAN-AKQAQKQHATV 701


>gi|384165327|ref|YP_005546706.1| DNA mismatch repair enzyme [Bacillus amyloliquefaciens LL3]
 gi|328912882|gb|AEB64478.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
           LL3]
          Length = 785

 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 214/722 (29%), Positives = 355/722 (49%), Gaps = 79/722 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L + QK L++   A A+M+ +       + DI   L  A  G +L+P+E   +   L AV
Sbjct: 40  LADIQKQLDEVEEASAIMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             +   +++  E DG S+    PL++   +    L +LE +I  CID    + LD AS  
Sbjct: 100 KQMKHFISQMTE-DGVSI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153

Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++   
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT   A+  +EI  
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIVQ 268

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            ++ +  +D  FA+A +A+ M    P ++       D  I ++  +HPLL          
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL---------- 312

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P    V N                   DI++  +   +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYTTIVITGPNTGGKTVTLKT 347

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL ++M++AGL++PA        FD + ADIGD QS+EQ+LSTFS H+  IV IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDHVFADIGDEQSIEQSLSTFSSHMVNIVSILKDVS 407

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETL PTY++L G  G SNA  I++ +G    II +A+  +        +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521

Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
              SL + +++ + +     S+  E   L++E++ +  +L+ +   L  +  Q+  ++L 
Sbjct: 522 MIASLEQSKKRADEELSETESIRKEAEKLHKELQQQIIELNAQKDKLMEEAEQKAAEKLE 581

Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            A  + + ++++    + + R     E+    K    A+ A  ++ +P+           
Sbjct: 582 DAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTE----KKR 637

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN---IRPIPNSKRK 723
              P  G++V V + G K A ++E  G+ +   VQ G ++++VK+ +   ++  P  K++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSAPEPKKE 693

Query: 724 NA 725
            A
Sbjct: 694 KA 695


>gi|148381072|ref|YP_001255613.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum A str. ATCC 3502]
 gi|148290556|emb|CAL84684.1| putative DNA mismatch repair protein [Clostridium botulinum A str.
           ATCC 3502]
          Length = 788

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 188/563 (33%), Positives = 293/563 (52%), Gaps = 68/563 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           S+ E ++ L +T  A  ++ ++   P +   + DI   ++ A  G  L P ++  +   L
Sbjct: 39  SMYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKGSALLPGQLLKIAAVL 96

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
           R      + +    E +      Y  L  + +    L ++EE+I   I+ +  I  DRAS
Sbjct: 97  RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEI-ADRAS 150

Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L  IR   +++N    + ++SL++  ++ +       + + T R  R  + +KA HK 
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL++L+A+I  +   +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           K   + V E+D  FA+A FA   +  CP ++ +  V       IEG +HPL         
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                        ++  E+             VPI +K+  E   ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL  LM+ +GL +PA+ +  + +F+ + ADIGD QS+EQ+LSTFS H+  IV+I++ 
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
               SLVL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     +    EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYVLRKEGVEN 462

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETLRPTYR+L G  G SNA  I+K +G    II  A++ +       +  R  
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517

Query: 549 ELYQSLMEERRKLESQARTAASL 571
           EL Q+L E+  K +  AR A +L
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENL 540


>gi|110803296|ref|YP_699161.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium perfringens SM101]
 gi|122956595|sp|Q0SRU6.1|MUTS2_CLOPS RecName: Full=MutS2 protein
 gi|110683797|gb|ABG87167.1| MutS2 family protein [Clostridium perfringens SM101]
          Length = 786

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 194/594 (32%), Positives = 303/594 (51%), Gaps = 59/594 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           I D AS+ L  IR    R+++  +S ++     I ++    +   L T R  R  + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            +K  +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              IK   + ++E+D  FA+A +   + G  PI++ +        I++   +HPL+    
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                       P                    D  V  DI +  E   ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KT GL  LM  +GL +PA  +  + +F+ I ADIGD QS+EQ+LSTFS H++ IV 
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           I+E  + +S VL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     K  
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
             ENA+ EF++ETLRPTYR+L G  G SNA  I++ +G    II+ A+K++  E L+ E 
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNIIEEAKKVISTESLQFE- 517

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
                 +L QSL E+  K E+ AR AA L  +        +++ + ++    ++ A   +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571

Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
           + +Q L+ AK + DT++++  +  R   S+D    L  E       I +A          
Sbjct: 572 EAKQILDSAKEEADTILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           +        + G +  + S+  K+  V+  P +   V VQ G M++ VK  ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLR 684


>gi|123967774|ref|YP_001008632.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
           marinus str. AS9601]
 gi|123197884|gb|ABM69525.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
           marinus str. AS9601]
          Length = 803

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 222/745 (29%), Positives = 358/745 (48%), Gaps = 102/745 (13%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
           MG   +    IP     E S++LLN+T     + ++  + +  S + DI+  +     G 
Sbjct: 41  MGKQSILSFVIP--SEYEASKRLLNETVEINELEKNLDKSISFSGVFDISRNIEICSKGG 98

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
           +++ SE+  + +T+ A  N+ K L     LD +     S   + L+ + N  T    K G
Sbjct: 99  VITSSELLEIAKTIAAARNLKKIL-----LDFEQRPYISSFTKNLIDHQNIETIF--KKG 151

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
              + +   I D AS +L ++R E          L KK+  +I     I K L       
Sbjct: 152 IESNGR---ISDNASNELSILRKE---------FLSKKLERKILVEKFIQKNLAYLQDTT 199

Query: 171 ITKRRSRMCVGIKASH--KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           I  R  R  + +K ++  K+    GI  + SSSG T + EP+  V   N    L     A
Sbjct: 200 IGDRYGRPVLAVKVNYVDKF---KGIIHDSSSSGNTVYFEPESVVTKGNKIASLEARITA 256

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           EE  +L   +  ++ + + +  +   +L ++ A  R+ +++W+ G  P       +S   
Sbjct: 257 EEFKLLKKWSHVVSDNSKNLIEMASILLRLENALTRSRYSKWIGGKTPTFEKNPIIS--- 313

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
              + G  HPLL+    +                           KG    PV +D  + 
Sbjct: 314 ---LIGFSHPLLIWEHKK---------------------------KGAPP-PVAVDFYIN 342

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
              +VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+   I  DIGD+QSL
Sbjct: 343 RNIKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSL 402

Query: 409 EQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
           E+NLSTFSGHISRI  IL+ +  +   S+VL+DEIGSGTDP EG ALA ++L+   ++  
Sbjct: 403 EENLSTFSGHISRIKGILDSLDYKKGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSD 462

Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
           + + TTHY D+  LK  D+RFEN +  F  E+L+P Y + WG  G SNAL+I+K IG D 
Sbjct: 463 ITLATTHYGDIKALKYNDSRFENVSVAFDEESLKPKYILNWGIPGRSNALSISKRIGLDE 522

Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
            I+  A      L+P+   +  S + + L EER K ++ A  AA L A    L+ E++  
Sbjct: 523 SILNEA---ANYLKPKEVDNINS-IIKGLEEERIKQQNSAEAAAELIARTEILHDELKRN 578

Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLIKE 640
            +     A  ++  E  ++ + +  AK ++  +++    +LRD + +      I   +KE
Sbjct: 579 YEHQKINAQKIQELERSKLSKHIISAKKEVIDLIK----KLRDKNVNGEDTRIIGKRLKE 634

Query: 641 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
            E+      ++ +           + S+ PQ G+ V +KSL +    +V++        V
Sbjct: 635 IETEHLTQKKSEK-----------SISWNPQVGDFVKIKSL-NSTGQIVDLDKKGGFYEV 682

Query: 701 QYGKMRVRVKKNNIRPI----PNSK 721
           + G  R  +  N+   I    PN K
Sbjct: 683 KCGSFRSTLSANDFEGINGEKPNFK 707


>gi|418634564|ref|ZP_13196957.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU129]
 gi|374836787|gb|EHS00364.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU129]
          Length = 782

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 208/686 (30%), Positives = 338/686 (49%), Gaps = 91/686 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ +E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSSLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  ++ +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P          D +I +    HPLL            +N+     DVE            
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF +ETL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++        +   + + +SL +  ++++ Q        R A
Sbjct: 494 DISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELDRLVREA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
              H  +   Y++ ++    L   A   K K  Q+V+     A  + D ++++  N LRD
Sbjct: 549 QQTHDALSKQYQQYQNYETSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               E    +KE E     I +  + DD + V          ++     G++V V S G 
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV 709
           K   V+E+ GD++ V VQ G +++++
Sbjct: 653 K-GEVLELVGDEEAV-VQMGIIKMKL 676


>gi|57866654|ref|YP_188310.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis RP62A]
 gi|242242444|ref|ZP_04796889.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
           W23144]
 gi|418612985|ref|ZP_13176006.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU117]
 gi|418626824|ref|ZP_13189420.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU126]
 gi|420175070|ref|ZP_14681515.1| MutS2 family protein [Staphylococcus epidermidis NIHLM061]
 gi|420234319|ref|ZP_14738884.1| MutS2 family protein [Staphylococcus epidermidis NIH051475]
 gi|81674957|sp|Q5HQ30.1|MUTS2_STAEQ RecName: Full=MutS2 protein
 gi|57637312|gb|AAW54100.1| MutS2 family protein [Staphylococcus epidermidis RP62A]
 gi|242234094|gb|EES36406.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
           W23144]
 gi|374817295|gb|EHR81480.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU117]
 gi|374831368|gb|EHR95110.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU126]
 gi|394244356|gb|EJD89701.1| MutS2 family protein [Staphylococcus epidermidis NIHLM061]
 gi|394304373|gb|EJE47778.1| MutS2 family protein [Staphylococcus epidermidis NIH051475]
          Length = 782

 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 208/686 (30%), Positives = 338/686 (49%), Gaps = 91/686 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ +E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINETCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  ++ +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P          D +I +    HPLL            +N+     DVE            
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF +ETL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++        +   + + +SL +  ++++ Q        R A
Sbjct: 494 DISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELDRLVREA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
              H  +   Y++ ++    L   A   K K  Q+V+     A  + D ++++  N LRD
Sbjct: 549 QQTHDALSKQYQQYQNYETSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               E    +KE E     I +  + DD + V          ++     G++V V S G 
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV 709
           K   V+E+ GD++ V VQ G +++++
Sbjct: 653 K-GEVLELVGDEEAV-VQMGIIKMKL 676


>gi|387819388|ref|YP_005679735.1| recombination inhibitory protein MutS2 [Clostridium botulinum
           H04402 065]
 gi|322807432|emb|CBZ05006.1| recombination inhibitory protein MutS2 [Clostridium botulinum
           H04402 065]
          Length = 788

 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 211/707 (29%), Positives = 354/707 (50%), Gaps = 70/707 (9%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           S+ E ++ L +T  A  ++ ++   P +   + DI   ++ A  G  L P ++  +   L
Sbjct: 39  SVYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKGSALLPGQLLKIAAVL 96

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
           R      + +    E +      Y  L  + +    L ++EE+I   I+ +  I  DRAS
Sbjct: 97  RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEIA-DRAS 150

Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L  IR   +++N    + ++SL++  ++ +       + + T R  R  + +KA HK 
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL++L+A+I  +   +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           K   + V E+D  FA+A FA   +  CP ++ +  V       IEG +HPL         
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                        ++  E+             VPI +K+  E   ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL  LM+ +GL +PA+ +  + +F+ + ADIGD QS+EQ+LSTFS H+  IV+I++ 
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
               SLVL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     +    EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALRKEGVEN 462

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETLRPTYR+L G  G SNA  I+K +G    II  A++ +       +  R  
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
           EL ++L E+  K +  AR A +L  E     ++ E++ + L +   +      ++ +  +
Sbjct: 518 ELIENLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARREAKNII 577

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
             AK + D +++D     R   + +    ++E    +   +++    +  +V E      
Sbjct: 578 KEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHEGEALKN 637

Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
             + G++V + S+  K+  V+  P +   VLVQ G M++     ++R
Sbjct: 638 VKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITANIKDLR 682


>gi|438001664|ref|YP_007271407.1| Recombination inhibitory protein MutS2 [Tepidanaerobacter
           acetatoxydans Re1]
 gi|432178458|emb|CCP25431.1| Recombination inhibitory protein MutS2 [Tepidanaerobacter
           acetatoxydans Re1]
          Length = 549

 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 165/516 (31%), Positives = 273/516 (52%), Gaps = 55/516 (10%)

Query: 23  LLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           L  +TS  LA++ S   + L  I+DI   LN A  G +LSP E+  +  T+RA   +   
Sbjct: 46  LQRETSEGLALLNSGIKISLRGIKDIRNSLNLAKLGSVLSPGELLDIASTMRAARLIKSA 105

Query: 82  LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIR 139
             E    D   +       E++   +    LEEKI   I  D +   I D AS  L  IR
Sbjct: 106 WNEKKPADSVIIN------EIVNGLHIFQSLEEKIEKAIVSDEE---IADNASPKLSSIR 156

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
            ++K   +++ + L ++ +  +    +  P++T R+ R  V +K   +  +  G+  + S
Sbjct: 157 RQKKNLAQSIRNKLNEIISSPYYQKALQDPIVTVRQDRYVVPVKQEFRGSI-QGVIHDQS 215

Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
           +SGAT ++EP   ++ NN   +L   E  E   IL   + ++ ++   I   +  +  +D
Sbjct: 216 ASGATLYIEPMAVMQMNNELRQLEIEEKKEIERILWDFSKKVQENYDFIHDTLYGLAHLD 275

Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
              A+AG++  + G  PI +++ +++      I+G +HPLL G                 
Sbjct: 276 FIMAKAGYSLDIKGTEPIFNNRGYINI-----IQG-RHPLLKGEV--------------- 314

Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
                                VP+D+ +  E  +++ITGPNTGGKT ++KT+GL  LM++
Sbjct: 315 ---------------------VPLDVYLGDEFNILIITGPNTGGKTVALKTVGLFILMAQ 353

Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
           +GL+LPA+    +  F+ + ADIGD QS+EQ+LSTFS H+  I +IL+L +++SL+++DE
Sbjct: 354 SGLHLPAQEGTEVSIFEDVFADIGDEQSIEQSLSTFSSHMKNIKEILDLATKDSLIILDE 413

Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
           +G+GTDP+EG ALA +IL YL ++    + TTHY++L          ENA+ EF ++TL 
Sbjct: 414 LGAGTDPTEGAALAMAILNYLYEKGSRVLATTHYSELKTFAFSKEGVENASMEFDIQTLS 473

Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           PTYR+  G  G SNA  IAK +G  ++++   + L+
Sbjct: 474 PTYRLTIGIPGKSNAFEIAKRLGLKQEVVDLGKSLM 509


>gi|312143799|ref|YP_003995245.1| MutS2 family protein [Halanaerobium hydrogeniformans]
 gi|311904450|gb|ADQ14891.1| MutS2 family protein [Halanaerobium hydrogeniformans]
          Length = 790

 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 183/541 (33%), Positives = 273/541 (50%), Gaps = 63/541 (11%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           +KL   T+    + +   L    I DI   L  A  G +LS  +I  +R TLR +  + K
Sbjct: 45  EKLAEVTALKTMITEFGKLPFGGIRDIRESLKKAEKGSVLSTDKINDIRNTLRGIKEIDK 104

Query: 81  KLTEAA-ELDGDSLQR-YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
              +   ELD   ++R Y  L E+        +L  +I  CI+     I D AS  L+ +
Sbjct: 105 YFVKIKDELDPRIIEREYQLLYEITAELLPREKLAREIDRCIN-DYGEIADDASSKLKSL 163

Query: 139 RAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           RA +  ++EN     LDS++K    Q      + + ++TKR +R  V +K  H+    DG
Sbjct: 164 RA-KIDSIENGIRDKLDSIIKSSKYQDM----LQESIVTKRENRYVVPVKQEHRNKF-DG 217

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I    S+SG T FMEP   V  NN    +   E AE   IL +L+++IA+    IK  + 
Sbjct: 218 IIHGQSASGLTLFMEPMAVVRLNNQLREVRAQESAEIQRILQVLSSKIAEQAEIIKKDLK 277

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            +  +D+  A A F+   D   P       ++ +  I+++  +HPLL             
Sbjct: 278 IISHLDVISASARFSLDHDCNAP------DINQEGLIDLKEARHPLL------------- 318

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
                                   + PVPID+++  +   +VITGPNTGGKT S+KT+GL
Sbjct: 319 -----------------------KEEPVPIDVQLGDQISTLVITGPNTGGKTVSLKTVGL 355

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
            +LM++ G+++PAK +  +  F  + ADIGD QS+EQ+LSTFS H+++I + L      +
Sbjct: 356 LTLMAQTGMHIPAKANSTIAVFKKVFADIGDEQSIEQSLSTFSSHMTKIKEFLAESDSNT 415

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL+DE+G GTDP EG AL  SIL+ L+ +  + + TTHY+ L          ENA+ EF
Sbjct: 416 LVLMDELGVGTDPEEGAALGISILEELQQKGAVTIATTHYSQLKSYAYGADNVENASVEF 475

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERLRPERQQHR 546
            +E+LRPTY ++ G  G SNA  IA  +G    II+RA+ L       VE +  E  Q R
Sbjct: 476 DIESLRPTYNLIMGVPGGSNAFEIALRLGIPEGIIKRARSLLTEEEIKVEDIINELNQER 535

Query: 547 K 547
           K
Sbjct: 536 K 536


>gi|126695576|ref|YP_001090462.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
           marinus str. MIT 9301]
 gi|126542619|gb|ABO16861.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
           marinus str. MIT 9301]
          Length = 803

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 215/703 (30%), Positives = 341/703 (48%), Gaps = 101/703 (14%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
           MG   +    IP     E S++LLN+T     +  +  + +  S + DI+  +     G 
Sbjct: 41  MGKRAILSFDIP--SEYESSKRLLNETVEITQLENNLDKSISFSGVFDISRNIEICSKGG 98

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
           ++S SE+  + +T+ A  N+ K L     LD +     S   + L+ + N  T    K G
Sbjct: 99  VISSSELLEIAKTIAAARNLKKIL-----LDFEQRPYISSFTKNLIDHQNIETIF--KKG 151

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
              + +   I D AS +L ++R E          L KK+  +I     I K L       
Sbjct: 152 IESNGR---ISDNASNELSILRKE---------FLSKKLERKILVEKFIQKNLAYLQDTT 199

Query: 171 ITKRRSRMCVGIKASH--KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           I  R  R  + +K ++  K+    GI  + SSSG T + EP   V   N    L     A
Sbjct: 200 IGDRYGRPVLAVKVNYVDKF---KGIIHDSSSSGNTVYFEPDSVVNKGNKIASLEARITA 256

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           EE  +L   +  ++ +   +  +   +L ++ A  R+ +++W+ G  P        +F+ 
Sbjct: 257 EEFKLLKKWSLVVSDNSENLIEMAAILLRLENALTRSRYSKWIGGKTP--------TFEK 308

Query: 289 S--INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
           S  I++ G  HPLL+    +  +                              PV +D  
Sbjct: 309 SPIISLIGFTHPLLIWEHKKKGACP----------------------------PVAVDFY 340

Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
           +    +VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+   I  DIGD+Q
Sbjct: 341 INRNIKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQ 400

Query: 407 SLEQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
           SLE+NLSTFSGHISRI +IL+L+  +   S+VL+DEIGSGTDP EG ALA ++L+   ++
Sbjct: 401 SLEENLSTFSGHISRIKEILDLLDHKKGLSVVLLDEIGSGTDPLEGSALAMALLKEFANK 460

Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
             +   TTHY D+  LK  D+RFEN +  F  ++L+P Y + WG  G SNAL+I+K IG 
Sbjct: 461 SDITFATTHYGDIKALKYNDSRFENVSVAFDEDSLKPKYILNWGIPGRSNALSISKRIGL 520

Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 583
           D  I+  A      L+P+   +  S + + L EE+ K ++ A  AA L A    L+ E++
Sbjct: 521 DESILNEA---ANYLKPKEVDNINS-IIKGLEEEKIKQQNSAEAAAELIARTEILHDELK 576

Query: 584 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLI 638
              +     A  ++  E  ++ + +  AK +    V D   +LRD + +      I   +
Sbjct: 577 RNYEYQKLNAEKIQEIERSKLSKHIVSAKKE----VIDLIKKLRDKNVNGEDTRIIGKRL 632

Query: 639 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 681
           KE E+      ++ +           + S+ PQ G+ V +KSL
Sbjct: 633 KEIETEHLTQKKSEK-----------SISWNPQVGDFVKIKSL 664


>gi|427394069|ref|ZP_18887571.1| MutS2 family protein [Alloiococcus otitis ATCC 51267]
 gi|425730239|gb|EKU93079.1| MutS2 family protein [Alloiococcus otitis ATCC 51267]
          Length = 793

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 207/740 (27%), Positives = 366/740 (49%), Gaps = 80/740 (10%)

Query: 16  SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           S+EE + LLNQT   +++++ +  + ++  E I   L     G  L+  EI ++ + ++ 
Sbjct: 42  SIEEIKMLLNQTGDGVSLLRMKGGIPVTPFESILPQLKRLSIGGGLNGGEIASIMKIIKN 101

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
              +     EA E D   L+    + ++L   N L++L + I   +D    ++ D AS  
Sbjct: 102 AREIKNFFREAQE-DDIVLENLYAVSDML---NPLSDLSKTIQAVVDEDGRVV-DSASPK 156

Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
           L+ IR   K+  +++   L+ +  +  ++  +   +IT R  R  V +KA  K +   GI
Sbjct: 157 LKGIRTGIKQVEQSIRQKLENIT-RGSKSRYLTDAIITIRNDRYVVPVKADSKNVFG-GI 214

Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
             + S++G T F+EP+  +  NN     ++ E AE   +L+ L+ +I    ++++  +  
Sbjct: 215 VHDQSATGQTLFVEPQSVLNQNNKLKEYTSQEKAEVDRLLADLSQKITPYSKDLEQDLQV 274

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
           +  +D   A+A +++ +    PI      V  +  I + G +HPL+              
Sbjct: 275 LTLLDFIAAKAKYSRQLSASQPI------VDDNREIALYGARHPLI-------------- 314

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
            +P                    D  V  DI +  + + +V+TGPNTGGKT  +KTLGL 
Sbjct: 315 -DP--------------------DQVVENDITLGLDYKAIVVTGPNTGGKTVVLKTLGLL 353

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
            +M ++GL+LP K++ R+  F+   ADIGD QS+EQ+LSTFS H++ IV IL  +   +L
Sbjct: 354 QIMGQSGLHLPVKDNSRIGVFEKCYADIGDEQSIEQSLSTFSSHMTNIVSILSDIDEATL 413

Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
           +++DE+G+GTDP EG ALA +IL Y+  R    V+T+HY +L           NA+  F 
Sbjct: 414 IVLDELGAGTDPQEGAALAIAILDYISARGSTVVITSHYPELKAYAYNRPETINASMAFD 473

Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKII-----------QRAQKLVERLRPERQ 543
           + +L+PTY++L G  G SNA  +A+ +G + +II           Q   +++E L  +RQ
Sbjct: 474 VNSLKPTYKLLLGIPGRSNAFEVAQRLGLNNEIIAASKQLMSGESQSVNQMIEDLEAKRQ 533

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
            + K    QSL +E          A+ LH ++ + Y   ++ +++L+ +A   K K  + 
Sbjct: 534 AYHKRN--QSLQKE-------LYDASKLHNDLKNFYEAYQERSQELEDKA---KDKANRI 581

Query: 604 VQQELNFAKVQIDTVVQDF-ENQLRDASADEINSL-IKESESAIAAIVEAHRPDDDFSVS 661
           V++    A+ Q D ++ D  + QL   S D I      +++S ++ +    +      V 
Sbjct: 582 VEK----AQEQADQIIDDLRQKQLNQPSEDNIKEHEFIDAKSRLSNMKYEQKHLKQNKVL 637

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           +          G+QVHV S  D+  T+V+  GD   V VQ G +++++ + ++  +   K
Sbjct: 638 QKEKEKKALAVGDQVHVDSF-DQEGTLVDQTGDSKWV-VQMGMLKMKIDEEDLTLLEKGK 695

Query: 722 RKNAANPAPRLRKQVCTCTS 741
            K A   A  LR  V +  +
Sbjct: 696 SKQATKQANSLRANVGSVKT 715


>gi|154482859|ref|ZP_02025307.1| hypothetical protein EUBVEN_00555 [Eubacterium ventriosum ATCC
           27560]
 gi|149736287|gb|EDM52173.1| MutS2 family protein [Eubacterium ventriosum ATCC 27560]
          Length = 800

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 218/721 (30%), Positives = 341/721 (47%), Gaps = 77/721 (10%)

Query: 3   HAVVQKAQIPFGKSLEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           HA+V  A I     ++E+QK   QT  AL+ + Q   L  S I +I   +     G  L 
Sbjct: 43  HALVPSADI---HEIKENQK---QTGDALSRIWQKGSLSFSGIHNIGESIKRLEIGSTLG 96

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
             E+  +   L+    V        E + DSL       ++ +    LT L+  I  CI 
Sbjct: 97  TGELLRIDSLLKVALRVKTFSRRDDEAERDSLD------DMFEAIEPLTNLKNDIERCII 150

Query: 122 CKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
            +  I  D AS +L+ IR + K    R    L SL+   +   +    +   LIT R  R
Sbjct: 151 SEDEIA-DDASANLKNIRRQMKITNDRVHSQLSSLINSQSGHTY----LQDALITMRDGR 205

Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
            CV +K  ++  + +GI  + SS+G+T F+EP   VE NN    L   E  E   IL+ L
Sbjct: 206 YCVPVKQEYRGNV-NGIIHDQSSTGSTLFIEPAAVVELNNKLRELEGKEADEIQIILANL 264

Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
           +   A+   E+K  M  + ++D  FA+A  A+ M    P  + Q        INI+  +H
Sbjct: 265 SMACAEHIYELKTDMKILPKLDFIFAKASLAKEMKASMPEFNDQRQ------INIKKGRH 318

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
           PLL               +P K                     VPIDI +  +  ++++T
Sbjct: 319 PLL---------------DPKKV--------------------VPIDIHLGKDFNLLIVT 343

Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
           GPNTGGKT S+KT+GL +LM +AGL++PA    +L  F  + ADIGD QS+EQ+LSTFS 
Sbjct: 344 GPNTGGKTVSLKTVGLLTLMGQAGLHIPAFEGSKLAVFKEVFADIGDEQSIEQSLSTFSA 403

Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
           H+   V+IL    ++SLVL DE+G+GTDP EG AL  SIL +L++     + TTHY++L 
Sbjct: 404 HMVNTVNILNQADQDSLVLFDELGAGTDPVEGAALGISILTFLKNIGSRIMATTHYSELK 463

Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
                    +NA+ EF +ETLRPTYR+L G  G SNA  I+  +G    II+ A+  ++ 
Sbjct: 464 LFALSTEGVQNASCEFDVETLRPTYRLLIGVPGKSNAFAISSKLGLPDYIIEDAKSHID- 522

Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
              + +Q    ++   +  +R ++E    T A   ++I  L R+ E + + L+ +   + 
Sbjct: 523 --SDNEQFE--DVLSEIERQRIQIEKDQETIAVYKSQIKSLKRDYELKTEKLNEQRDKIL 578

Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
            K  ++    L  AK   D  ++      +  +  E    +++S S + A ++ ++    
Sbjct: 579 NKAREEAVDILKEAKETADEAIKTINKYGKSGNTRE----MEKSRSNVGAKLKKNQVGSS 634

Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKL-ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
              ++   +     F     VK L   L  TV  +P     + V+ G +  +V   NIR 
Sbjct: 635 IKAAKPKKAYKPSDFKLGTGVKVLSMNLNGTVASLPNAAGNLTVKMGILNSKV---NIRD 691

Query: 717 I 717
           +
Sbjct: 692 L 692


>gi|451817877|ref|YP_007454078.1| MutS2 protein MutS [Clostridium saccharoperbutylacetonicum
           N1-4(HMT)]
 gi|451783856|gb|AGF54824.1| MutS2 protein MutS [Clostridium saccharoperbutylacetonicum
           N1-4(HMT)]
          Length = 786

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 178/540 (32%), Positives = 283/540 (52%), Gaps = 63/540 (11%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G  +V K + P+    E + KL +   A   ++      L  + D    +  A  G  LS
Sbjct: 27  GKDLVDKLE-PYNNLYEINNKLEDTNEALEILISKGNPPLEGLADTHEGIERAKKGGTLS 85

Query: 62  PSEICAVRRTLRA---VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNF-LTELEEKIG 117
           P ++  +   LRA   +   +K+         D ++R  P LE L      +  LEE+I 
Sbjct: 86  PEQLLRIGGMLRASRTMKEFFKR---------DEVERSYPRLEDLAYILVPVKTLEEEIE 136

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRR 175
             I  +  I  D+AS+ L  IR    R+++  +S +++  + I ++    +   L T R 
Sbjct: 137 RAIVSEDEIS-DKASQTLYNIR----RSLKEKNSSVREKISSIVKSNSKYLQDDLYTMRG 191

Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
            R  + +K+ +K  +P G+  + SS+GAT+F+EP   V  NN    L   E AE   ILS
Sbjct: 192 DRYVIPVKSEYKSQVP-GLVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIERILS 250

Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
            L++++  +  +    +  ++E D  FA+A +A  ++ + PI      V+ D + +I   
Sbjct: 251 ELSSKVKLNGEQCLSNLKVLIEFDFIFAKAKYASALNAIKPI------VTEDGTFSILSG 304

Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
           +HPL+ G                                   D  VP D+ +  E   ++
Sbjct: 305 RHPLIAG-----------------------------------DKVVPSDVYLGKEFTTLM 329

Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
           ITGPNTGGKT ++KT+GL  +M  +GL +PA+++  + +F  + ADIGD QS+EQ+LSTF
Sbjct: 330 ITGPNTGGKTVTIKTVGLLHIMGLSGLLIPARDNSSIAFFTEVFADIGDEQSIEQSLSTF 389

Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
           S H++ IV+I++ V  +SLVL DE+G+GTDP+EG ALA SIL+ L++R    + TTHY++
Sbjct: 390 SSHMTNIVEIMKHVDDKSLVLFDELGAGTDPTEGAALAVSILETLKNRGAKLIATTHYSE 449

Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           L     K    ENA+ EF +ETLRPTYR+L G  G SNA  I+K +G    +I+RA++ +
Sbjct: 450 LKAYAIKTEGVENASVEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKEYI 509


>gi|392957411|ref|ZP_10322935.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           macauensis ZFHKF-1]
 gi|391876818|gb|EIT85414.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           macauensis ZFHKF-1]
          Length = 787

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 200/688 (29%), Positives = 336/688 (48%), Gaps = 66/688 (9%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +L   E+     T+      +K+  E    DG  L    PLL
Sbjct: 65  LGGIRDIRASVKRAAIGGMLFAEELVDSATTIHG-GRRFKRFVEGMVEDGIEL----PLL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
              ++  + L ELE  I  CID    + +D AS +L  IR + +    R  E L+S+++ 
Sbjct: 120 AARVEEIDPLQELEAAIKACIDDNGHV-MDSASPELRTIRGQLRTFEARVREKLESMVRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
            + Q      +   +IT R  R  + +K  ++     G+  + SSSGAT F+EP+  +  
Sbjct: 179 SSYQKM----LSDTIITIRNDRFVLPVKQEYRANF-GGMVHDQSSSGATLFIEPQAIITI 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL  L+  + +    + + +  + +ID  FA+A +++ +    
Sbjct: 234 NNQLKEAKAKETREIEKILRELSGVVGEHAEPLLHNVAVLAQIDFIFAKAFYSRELKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++ Q       S++I   +HPL+   ++                              
Sbjct: 294 PIMNDQQ------SMSIIKARHPLIDAEAV------------------------------ 317

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                VPID  +    + ++ITGPNTGGKT ++KT+GL SLM+++GL +PA+    +  F
Sbjct: 318 -----VPIDATLGGAFQSLIITGPNTGGKTVTLKTIGLLSLMAQSGLQIPAEEQSEMTVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + I ADIGD QS+EQ+LSTFS H+  IVDIL+ V+ +SLVL DE+G+GTDP EG ALA S
Sbjct: 373 ETIYADIGDEQSIEQSLSTFSSHMVNIVDILKTVNYKSLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+  R    V TTHY++L           NA+ EF++ETLRPTY++L G  G SNA 
Sbjct: 433 ILDYVFARGARVVATTHYSELKAYAYNREGVMNASVEFNVETLRPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            I++ +G D +II  A+  +       + ++   + +SL + +++ E +   A +L  + 
Sbjct: 493 EISRRLGLDVRIIDEAKAQI-----SAEDNKIDNMIRSLEDNQKRAEFEREEAIALRQDA 547

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
             L ++++ + + L+     L  +  ++ ++ +  AK   + V+++     ++A   + +
Sbjct: 548 EKLKQDLQQKLEQLEAERDGLLEQAERKAEEAVAAAKKTAEDVIKELRTFQQEAGNVKEH 607

Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
            LI+  +    A              +     F P  G++V V S G K   + +V   +
Sbjct: 608 RLIEARKKLDEATPTLRTKKKKQGAPKPKAVDFEP--GDEVKVLSFGQKGHIIAKVSNQE 665

Query: 696 DTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
            +  VQ G +++ V +N++  +   K K
Sbjct: 666 YS--VQIGILKMNVSRNDLELLKQPKEK 691


>gi|399924139|ref|ZP_10781497.1| MutS2 family protein [Peptoniphilus rhinitidis 1-13]
          Length = 790

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 219/740 (29%), Positives = 367/740 (49%), Gaps = 72/740 (9%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           I      +E +  LN+T+ AL ++ S  +P  L  I DI  I+     G  LS S +  V
Sbjct: 37  IEISTDFDEIKNRLNETNEALKLILSKGEP-QLFGIVDIKNIIKRVEIGGSLSASALLQV 95

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
              LR    +   L +  E + D   + + + +L+++     +LE++I   I  +  I  
Sbjct: 96  SDFLRVSRGLKTYLKK--ESNSDESIKLNYIDKLIEDLYTEKKLEDEINSKIISEEEI-A 152

Query: 129 DRASEDLELIR---AERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
           D AS +L  IR   A++K +++N L+ +L        QA  +   ++T R  R  V +K 
Sbjct: 153 DDASRELLRIRRGIADKKNSIKNKLNGILNN------QANYLQDAIVTLRDGRYVVPVKI 206

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            +K  +  G+  ++SSSG T ++EP   VE NN    L   E AE   IL  L+  +A+S
Sbjct: 207 ENKSRVR-GLVHDISSSGQTAYIEPMSVVEANNELKELYIKENAEIEKILRELSELVAES 265

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              IK   D+++E+D  FA+A          P       ++ D  IN+    HP L    
Sbjct: 266 SEYIKSNQDKLIELDFIFAKARLGIKYHANMP------KINKDGRINLIRAYHPFL---- 315

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                                        + I+   VPIDI +  +   ++ITGPNTGGK
Sbjct: 316 ----------------------------DRKIA---VPIDINLGIDFSSLIITGPNTGGK 344

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T S+KT+GL SLM++ GL +P +    +  F+ + ADIGD QS+EQ+LSTFS H+  IV 
Sbjct: 345 TVSLKTVGLLSLMTQYGLLIPCEESSEIAIFEKVFADIGDEQSIEQSLSTFSSHMVNIVY 404

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
            L+ V++ SLVL DE+G+GTDP+EG ALA +I++ +  R    + TTHY  L        
Sbjct: 405 TLKNVTKNSLVLFDELGAGTDPTEGAALARAIMESMLKRNIRCISTTHYNQLKVFALTTD 464

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
              NA+ EF +++L PTYR+L G  G SNA  I++ +G   +II+ ++KL+     E + 
Sbjct: 465 GVANASMEFDVDSLSPTYRLLIGVPGKSNAFEISRRLGLPNEIIEESKKLLSSENIEFE- 523

Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDL---YREIEDEAKDLDRRAAHLKAKET 601
               ++ QS+ ++R K+         L  E  DL    +++E + ++L+ +   +  K  
Sbjct: 524 ----DVLQSIDKDRTKIREYKE---ELEREKRDLEIENKKLEGKIRNLEDQREKILEKSR 576

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
           ++ ++ L  AK  +D ++ +  N+ +D    E +  I+E++  +   ++  R + +  + 
Sbjct: 577 EEAKRILLNAKENVDIILSEI-NEAKDNINSENSKKIQEAQDLLRESLKNSRNNSELEIK 635

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           +        + G++V   SLG+ +ATV+E+P     VLVQ G M++++ K ++  I   +
Sbjct: 636 KAVNPIREIKVGDKVRT-SLGN-VATVIELPDSKGNVLVQSGIMKMKLPKESLTRIDVQE 693

Query: 722 RKNAANPAPRLRKQVCTCTS 741
                N    L+ +     S
Sbjct: 694 DTTKHNTKKILKSKATNVKS 713


>gi|384044690|ref|YP_005492707.1| MutS2 family protein [Bacillus megaterium WSH-002]
 gi|345442381|gb|AEN87398.1| MutS2 family protein [Bacillus megaterium WSH-002]
          Length = 660

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 202/633 (31%), Positives = 320/633 (50%), Gaps = 91/633 (14%)

Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 164
           L E+E+ I   ID     +LD AS+ L  IR + +    R  E L+SL++  +AQ     
Sbjct: 3   LPEVEQTIKMSIDENG-TVLDGASDQLRGIRQKLRSTESRIREKLESLIRSSSAQKM--- 58

Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
            +   ++T R  R  + +K  ++     GI  + SSSGAT F+EP+  V  NN    L  
Sbjct: 59  -LSDAIVTIRNERFVIPVKQEYRSAY-GGIVHDQSSSGATLFIEPQAIVTLNN---ELQE 113

Query: 225 SEIAEETAI------LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
           +++ E+  I      L++  AE+A   R+  YL+    E+D  FA+  ++  +    P +
Sbjct: 114 AKVKEKQEIERILIALTVQVAEVANELRQNVYLLG---ELDFMFAKGRYSHELKASKPKM 170

Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
           + + ++    +      KHPL+                  + DV                
Sbjct: 171 NDRGYIKLVKA------KHPLIA-----------------QEDV---------------- 191

Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
             V  DI++  +   +VITGPNTGGKT ++KTLGL +LM++AGL +PA +   +  F  +
Sbjct: 192 --VANDIELGDQYTSIVITGPNTGGKTVTLKTLGLFTLMAQAGLQIPALDGSEMAVFKHV 249

Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
            ADIGD QS+EQ+LSTFS H+  IVDIL+ V  ESLVL DE+G+GTDP EG ALA SIL 
Sbjct: 250 FADIGDEQSIEQSLSTFSSHMVNIVDILQKVDHESLVLFDELGAGTDPQEGAALAISILD 309

Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
            + +R    V TTHY +L           NA+ EF +ETL PTY++L G  G SNA  I+
Sbjct: 310 QVYERGARVVATTHYPELKAYGYNREGVVNASVEFDIETLSPTYKLLIGVPGRSNAFEIS 369

Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
           K +G   ++I+RA+  +       + ++   +  SL + RR+ E +   A  L  E   L
Sbjct: 370 KRLGLSAEVIERAKGYI-----GSETNKVENMIASLEDSRRQSEHELEEAEELRKEAQKL 424

Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 638
           ++E++ +  + + +   L  K  ++ Q  +  A  + + ++ D    LR  S    ++L+
Sbjct: 425 HKELQSQIIEFNEKRDKLYEKAEEKAQATVKAASEEAEKIISD----LRKMSQKN-HALV 479

Query: 639 KESESAIAAIVEAHRPDDDFSVSETNTSSFTP----------QFGEQVHVKSLGDKLATV 688
           KE E     ++EA +  +D +V     S   P          Q G++V V S G K  T+
Sbjct: 480 KEHE-----LIEARKRLED-AVPTLEKSKKKPAVPKKQERTLQAGDEVKVLSWGQK-GTL 532

Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           VE   +++   VQ G M+++VK+ ++  I + K
Sbjct: 533 VERVSNNEW-QVQMGIMKMKVKEKDLEYISSPK 564


>gi|420189663|ref|ZP_14695631.1| MutS2 family protein [Staphylococcus epidermidis NIHLM037]
 gi|420204084|ref|ZP_14709644.1| MutS2 family protein [Staphylococcus epidermidis NIHLM015]
 gi|394260998|gb|EJE05800.1| MutS2 family protein [Staphylococcus epidermidis NIHLM037]
 gi|394274098|gb|EJE18523.1| MutS2 family protein [Staphylococcus epidermidis NIHLM015]
          Length = 782

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 208/686 (30%), Positives = 338/686 (49%), Gaps = 91/686 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ +E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  ++ +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P          D +I +    HPLL            +N+     DVE            
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF +ETL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++        +   + + +SL +  ++++ Q        R A
Sbjct: 494 DISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELDRLVREA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
              H  +   Y++ ++    L   A   K K  Q+V+     A  + D ++++  N LRD
Sbjct: 549 QQTHDALSKQYQQYQNYETSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               E    +KE E     I +  + DD + V          ++     G++V V S G 
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRV 709
           K   V+E+ GD++ V VQ G +++++
Sbjct: 653 K-GEVLELVGDEEAV-VQMGIIKMKL 676


>gi|417645954|ref|ZP_12295839.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU144]
 gi|329729966|gb|EGG66357.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU144]
          Length = 782

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 207/681 (30%), Positives = 336/681 (49%), Gaps = 81/681 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+  E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA H+    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEHRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  +  +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P    +  +   ++       HPLL            +N+     DVE            
Sbjct: 295 PTFKEERTIYLPNAF------HPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
           +I+K +G    II +A+ ++     E     +S  + S  + ++R +L+   R A   H 
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
            +   Y++ ++  K L   A   K K  Q+V+     A  + D ++++  N LRD    E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE 605

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
               +KE E     I +  + DD +            ++     G++V V S G K   V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656

Query: 689 VEVPGDDDTVLVQYGKMRVRV 709
           +E+ G+++ V VQ G +++++
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL 676


>gi|296331594|ref|ZP_06874063.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305675447|ref|YP_003867119.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. spizizenii str. W23]
 gi|296151189|gb|EFG92069.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305413691|gb|ADM38810.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. spizizenii str. W23]
          Length = 785

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 220/734 (29%), Positives = 366/734 (49%), Gaps = 83/734 (11%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           S++E +K L++   A A+++ +       + DI G L  A  G +LSPSE   +   L A
Sbjct: 39  SIDEIKKQLDEVDEASAIIRLRGQAPFGGLTDIRGALRRAEIGSVLSPSEFTEISGLLYA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
           V  +   +++ AE DG  +    PL+ +  +    L++LE  I  CID    + LD ASE
Sbjct: 99  VKQMKHFISQMAE-DGVDI----PLIHQHAEQLITLSDLERDINSCIDDHGEV-LDHASE 152

Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++  
Sbjct: 153 TLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
              GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT + A+   E+ 
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEQTAEHTEEL- 266

Query: 250 YLMDRVLE-IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           +L  RVL+ +D  FA+A +A+ +    PI++    V    +      +HPLL        
Sbjct: 267 FLDLRVLQTLDFIFAKARYAKAVKATKPIMNDNGFVRLKKA------RHPLL-------- 312

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                   P    V N                   DI++  +   +VITGPNTGGKT ++
Sbjct: 313 --------PPDQVVAN-------------------DIELGGDFSTIVITGPNTGGKTVTL 345

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KTLGL +LM+++GL++PA        F+ + ADIGD QS+EQ+LSTFS H+  IV ILE 
Sbjct: 346 KTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILEQ 405

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
           V+  SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           N
Sbjct: 406 VNENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTHYPELKAYGYNREGVMN 465

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETL PTY++L G  G SNA  I+K +G    II +A+  +       + +   
Sbjct: 466 ASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPNHIIGQAKSEM-----TAEHNEVD 520

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
            +  SL + +++ E +     S+  E   L++E++ +  +L+ +   +  +  QQ  +++
Sbjct: 521 TMIASLEQSKKRAEEELSETESIRKEAEKLHKELQQQIIELNSKKDKMLEEAEQQAAEKV 580

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETNT 665
             A  + + ++ +  +   +  + + + LI   K  E A+    ++ +P+     ++T  
Sbjct: 581 KAAMKEAEDIIHELRSIKEEHKSFKDHELINAKKRLEGAVPTFEKSKKPEK----TKTQK 636

Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
             F P  G++V V + G K  T++E  G ++   VQ G ++++VK+ ++  I ++     
Sbjct: 637 RDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN-VQIGILKMKVKEKDLEFIKSA----- 687

Query: 726 ANPAPRLRKQVCTC 739
             P P+  K +   
Sbjct: 688 --PEPKKEKIITAV 699


>gi|336428866|ref|ZP_08608841.1| MutS2 protein [Lachnospiraceae bacterium 3_1_57FAA_CT1]
 gi|336004409|gb|EGN34474.1| MutS2 protein [Lachnospiraceae bacterium 3_1_57FAA_CT1]
          Length = 792

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 183/565 (32%), Positives = 285/565 (50%), Gaps = 62/565 (10%)

Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
           LIT R  R C+ +KA ++  +P G+  + SS+G+T F+EP   V  NN    L   E  E
Sbjct: 187 LITSRNGRYCIPVKAEYRSQVP-GMIHDQSSTGSTLFVEPAAVVNLNNQMRELEIKEQEE 245

Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
              +L+ L+A++A+   +I      +  +D  FA+A  A   +   PI + + H+     
Sbjct: 246 IEKVLASLSAQVAEHTEDIAENQRILTLLDFIFAKASLALEQNATEPIFN-EDHI----- 299

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
           +NI G +HPLL                    D + +               VPIDI++  
Sbjct: 300 LNIRGARHPLL--------------------DKKKT---------------VPIDIRLGR 324

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
           +  +++ITGPNTGGKT S+KT GL  LM +AGL++PA +   L  F  + ADIGD QS+E
Sbjct: 325 DYDLLIITGPNTGGKTVSLKTTGLFCLMGQAGLHIPALDRSELSIFREVYADIGDEQSIE 384

Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
           Q+LSTFS H++ IV IL+    +SL L DE+G+GTDP+EG ALA +IL +L DR    + 
Sbjct: 385 QSLSTFSSHMTSIVSILKNADADSLCLFDELGAGTDPTEGAALAIAILNFLHDRGIRTMA 444

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTHY++L       +  ENA  EF +E+LRPTYR+L G  G SNA  I+  +G    II 
Sbjct: 445 TTHYSELKVYALSTSFVENACCEFDVESLRPTYRLLIGIPGKSNAFAISSRLGLSDDIIN 504

Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
            A     R +   +     +L   L + R  +E +    AS   E+  L +++E + + +
Sbjct: 505 SA-----RTQISAEAKSFEDLLTDLEQSRVTIEKEQLEIASYKREVEALKKQLEAKQEKI 559

Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI-----NSLIKESESA 644
           D+    +  +  +Q ++ L  AK   D  ++ F+     AS  ++     N   K S+  
Sbjct: 560 DQAKERILREANEQAREILQDAKNTADETIRAFQKAGPGASMKDLEKARENLRGKISDKN 619

Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
               V+  +P      +++       + GE V + S+G K  TV  +P +   + VQ G 
Sbjct: 620 EKLAVKNQQP------AQSGVKPSQLKLGESVRIVSMGLK-GTVSTMPDNKGNLFVQCGI 672

Query: 705 MRVRVKKNNIRPIPNSKRKNAANPA 729
           +R    + NIR +   + K+A+  A
Sbjct: 673 IRT---QTNIRDLVLIQEKDASATA 694


>gi|347727052|gb|AEP19884.1| recombination inhibitory protein [Exiguobacterium sp. 11-28]
          Length = 784

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 223/728 (30%), Positives = 347/728 (47%), Gaps = 104/728 (14%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQR 95
           L L  + D+   +  A  G +LS SE+ AV   +   R V N ++KL E    D + L R
Sbjct: 62  LPLGGLTDVRSEVKRAAIGSVLSTSELLAVAAVMYSGRQVKNFFEKLHE----DNEDL-R 116

Query: 96  YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LD 150
              L E  +    L E+E+ I   ID +   + D AS+ L  +R +  R+ E      +D
Sbjct: 117 IPRLDEYAERLTKLIEVEQSIRHAIDDQG-TVQDSASDRLRGLRTQL-RSFEGSVRSRID 174

Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
           ++L+  A  +  A      ++T R  R  V +K  ++     GI  + S+SG T F+EP+
Sbjct: 175 NILRNNAKMLSDA------IVTIRNDRYVVPVKMEYRQAFG-GIVHDQSASGQTLFIEPQ 227

Query: 211 GAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
             V  NN   EVRL   E AE   ILS L+  +      +   +D +  +D  FA+  + 
Sbjct: 228 AIVSINNEIQEVRLK--ERAEIDRILSELSNLVGGVADSVVINLDVLATLDFVFAKVAYG 285

Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
             +    P L+ +  +    +      +HP +                P           
Sbjct: 286 HQLKATEPKLNDEREIKLKQA------RHPFI----------------P----------- 312

Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
                    D  VPI +++      +VITGPNTGGKT ++KTLGL  LM ++GLY+PA+ 
Sbjct: 313 --------QDEVVPITVELGEAFTSLVITGPNTGGKTVTLKTLGLLQLMVQSGLYVPAEF 364

Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
              L  FD I ADIGD QS+EQ+LSTFS H++ IV +L+ +   SLVL DE+G+GTDP E
Sbjct: 365 GTELSVFDAIYADIGDEQSIEQSLSTFSSHMTNIVSMLDKIDFMSLVLFDELGAGTDPQE 424

Query: 449 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
           G ALA +IL  ++ R      TTHY++L           NA+ EF +E+L PTYR+L G 
Sbjct: 425 GAALAIAILDEVKRRGARVAATTHYSELKAYAYNREGVMNASMEFDIESLSPTYRLLIGV 484

Query: 509 TGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEE 557
            G SNA  I++ +G   ++I +A           + ++  L  E  +HR  +L + L+ +
Sbjct: 485 PGRSNAFEISRRLGLSEQVIDKARSHVGTDAESVESMINEL--EAAKHRAEQLEKELIVK 542

Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
           R  LE++    A+  A++ D  RE        D      +A+  + V+Q    AK Q + 
Sbjct: 543 RHDLEAE---QAAFEAKLTDFERE-------RDTMYGEAEARAEKAVEQ----AKRQANE 588

Query: 618 VVQDFENQLRD---ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
           V+ D   +LR+       EI +  K+ ESA   + +           +  T S     GE
Sbjct: 589 VI-DRLKKLREEGIVKEHEIIAAKKQLESAKPTLQDKKIQKVKQKAQQKRTFS----KGE 643

Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 734
           +V V +   K   V ++  +D+   VQ G M+V VK ++++ I  SK ++  +    L++
Sbjct: 644 EVKVTTFNQKGYIVKQL--NDNEYNVQVGIMKVNVKADDLQKIGPSKEQSLQSKGSSLKR 701

Query: 735 QVCTCTSL 742
           Q  T + L
Sbjct: 702 QSSTKSEL 709


>gi|308174555|ref|YP_003921260.1| DNA mismatch repair enzyme [Bacillus amyloliquefaciens DSM 7]
 gi|307607419|emb|CBI43790.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens DSM
           7]
          Length = 785

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 214/722 (29%), Positives = 355/722 (49%), Gaps = 79/722 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L + QK L++   A A+M+ +       + DI   L  A  G +L+P+E   +   L AV
Sbjct: 40  LADIQKQLDEVEEASAIMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             +   +++  E DG S+    PL++   +    L +LE +I  CID    + LD AS  
Sbjct: 100 KQMKHFISQMTE-DGVSI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153

Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++   
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT   A+  +EI  
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIVQ 268

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            ++ +  +D  FA+A +A+ M    P ++       D  I ++  +HPLL          
Sbjct: 269 NVEVLQTLDSIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL---------- 312

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P    V N                   DI++  +   +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYTTIVITGPNTGGKTVTLKT 347

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL ++M++AGL++PA        FD + ADIGD QS+EQ+LSTFS H+  IV IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDHVFADIGDEQSIEQSLSTFSSHMVNIVSILKDVS 407

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETL PTY++L G  G SNA  I++ +G    II +A+  +        +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521

Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
              SL + +++ + +     S+  E   L++E++ +  +L+ +   L  +  Q+  ++L 
Sbjct: 522 MIASLEKSKKRADEELSETESIRKEAEKLHKELQQQIIELNAQKDKLMEEAEQKAAEKLE 581

Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            A  + + ++++    + + R     E+    K    A+ A  ++ +P+           
Sbjct: 582 DAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTE----KKR 637

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN---IRPIPNSKRK 723
              P  G++V V + G K A ++E  G+ +   VQ G ++++VK+ +   ++  P  K++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSAPEPKKE 693

Query: 724 NA 725
            A
Sbjct: 694 KA 695


>gi|242373376|ref|ZP_04818950.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
           M23864:W1]
 gi|242348739|gb|EES40341.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
           M23864:W1]
          Length = 782

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 209/681 (30%), Positives = 344/681 (50%), Gaps = 81/681 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ +E+  ++R ++ V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLIHRANIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           E +     L++L ++I     C    + D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 EKMNQLPVLSDLFQEIK--DKCDTYDLFDHASYALQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           + Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 SNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT ++A +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTGQVA-AEADALLIAESVMGQIDFLTAKARYARSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P    +  V   ++       HPLL                       N E  V +  + 
Sbjct: 295 PTFKKERTVYLPNAF------HPLL-----------------------NKETVVANTIEF 325

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
           I D           ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 326 IDD----------VET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLVPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL    + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R+   L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDYVRNLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
           +I+K +G    II +A+ ++     E     +S    S  + E+R +L+   R A   H 
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINSMIESLERNSKRVDEQRIELDRLVREAQETHD 553

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
            +   Y++ ++  K L   A   K K  Q+V+     A  + D+++++  + LRD    E
Sbjct: 554 ALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADSILKELRD-LRDNKGVE 605

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
               +KE E     I +  + D+ +       +    ++     G++V V S G K   V
Sbjct: 606 ----VKEHE----LIDKKKQLDEQYEEKSIKQNVQKKKYDKINAGDEVKVLSYGQK-GEV 656

Query: 689 VEVPGDDDTVLVQYGKMRVRV 709
           +E+ G+D+ V VQ G +++++
Sbjct: 657 LELVGEDEAV-VQMGIIKMKL 676


>gi|223043809|ref|ZP_03613852.1| MutS2 family protein [Staphylococcus capitis SK14]
 gi|417907533|ref|ZP_12551304.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus capitis VCU116]
 gi|222442906|gb|EEE49008.1| MutS2 family protein [Staphylococcus capitis SK14]
 gi|341595562|gb|EGS38205.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus capitis VCU116]
          Length = 782

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 200/678 (29%), Positives = 332/678 (48%), Gaps = 75/678 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ +E+  ++R ++ V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLIHRANIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           E +     LT+L ++I     C    + D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 EKMSQLPVLTDLFQEIKD--KCDTYDLYDHASYALQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           + Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 SNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N   RL N E  E   IL+ LT ++A     I      + +ID   A+A +A+ + G  P
Sbjct: 236 NQISRLRNDEAVERERILTELTGQVAVEADSILIAESVMGQIDFLIAKARYARSIKGTKP 295

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
               +  V   ++       HPLL            SN+     DVE             
Sbjct: 296 TFKKERTVYLPNAF------HPLL------DKETVVSNTIEFIDDVE------------- 330

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
                            V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F+
Sbjct: 331 ----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFE 374

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            +  DIGD QS+EQ+LSTFS H+  IV+IL    + SL+L DE+G+GTDPSEG ALA SI
Sbjct: 375 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEGAALAMSI 434

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L Y+R+   L + TTHY +L           NA+ EF+++TL PTY++L G  G SNA +
Sbjct: 435 LDYVRNLGSLVMATTHYPELKAYSYNREGVMNASVEFNVDTLSPTYKLLMGVPGRSNAFD 494

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I+K +G    II +A+ ++        +   + + +SL    ++++ Q      L  E  
Sbjct: 495 ISKKLGLGLNIINKAKTMI-----GTDEQEINSMIESLERNSKRVDEQRIELDRLVREAQ 549

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 636
           + +  +  + +        L  +  ++  Q +  A  + DT++++  + LRD    E   
Sbjct: 550 ETHDALAKQYQQYQNYEQSLMNEAKEKANQRVKSATKEADTILKELRD-LRDNKGAE--- 605

Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEV 691
            +KE E     I +  + DD +       S    ++     G++V V S G K   V+E+
Sbjct: 606 -VKEHE----LIDKKKQLDDQYEAKSIKQSVQKKKYDKINAGDEVKVLSYGQK-GEVLEL 659

Query: 692 PGDDDTVLVQYGKMRVRV 709
            G+D+ V VQ G +++++
Sbjct: 660 VGEDEAV-VQMGIIKMKL 676


>gi|417643505|ref|ZP_12293552.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus warneri VCU121]
 gi|330685726|gb|EGG97362.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU121]
          Length = 782

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 205/681 (30%), Positives = 343/681 (50%), Gaps = 81/681 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  +A  ++ +  G +L+ +E+ A++R ++ V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLTKVAQYIHRSTIGGVLNVTELNAIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
             +     LT+L + I    D   L   D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 SQMAQLPILTDLFKDINDKCDAHDL--YDHASYELQSIRSKISSTNQRIRQNLDRVVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A +      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANR----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT+++A  E +   L + ++  +D   A+A +A+ + G  
Sbjct: 236 NQISRLHNDEAVERERILTELTSQVA-VESDALLLAESIMGHLDFLIAKARYARAIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P   ++  V   ++       HPLL        +   +N+     D+E            
Sbjct: 295 PTFHNERTVYLPNAY------HPLL------DHNTVVANTIEFVDDIE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++G+ +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R+   L + TTHY +L           NA+ EF +ETL PTY++L G  G SNA 
Sbjct: 434 ILDHVRNLGALVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
           +I+K +G    II +A+ ++     E     +S    S  + E+R +L+   + A + H 
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINNMIESLEKNSKRVDEQRIELDRLVKEAQTTHD 553

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
           E+   Y++ ++  K L   A   K K  Q+V+     A  + D ++++   +LRD    +
Sbjct: 554 ELEKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADAILKELR-ELRDKKGAD 605

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
               +KE E     I +  + DD +       +    ++     G++V V S G K   V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQNVQKQKYDKIQAGDEVKVLSYGQK-GEV 656

Query: 689 VEVPGDDDTVLVQYGKMRVRV 709
           +E+ GD++ V VQ G +++++
Sbjct: 657 LELVGDEEAV-VQMGILKMKL 676


>gi|210623508|ref|ZP_03293853.1| hypothetical protein CLOHIR_01803 [Clostridium hiranonis DSM 13275]
 gi|210153566|gb|EEA84572.1| hypothetical protein CLOHIR_01803 [Clostridium hiranonis DSM 13275]
          Length = 793

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 219/722 (30%), Positives = 352/722 (48%), Gaps = 81/722 (11%)

Query: 17  LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
            EE Q  L +T+ A +++ +   ++L  I D+   +  A  G  L P  +  V  TLRA 
Sbjct: 40  FEEVQYRLQETTEAQSILIKRGHVNLGGIHDVLDKVKRAEIGASLDPGSLLMVADTLRAA 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASED 134
               + L+ +   DG+      P+++ L    ++  E+E+ +   I  ++ I  D AS  
Sbjct: 100 ----RVLSNSLSGDGEEEDFNYPIIQSLATSLYIHREIEDAVYNAIVSEIEI-ADSASHT 154

Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
           L  IR +  +  +++ S L  + +       +   +I+ R  R  V +KA ++ ++  GI
Sbjct: 155 LRDIRRKIVQKNQSIRSKLNTIISSATYQKYLQDSIISMRGDRFVVPVKAEYRSVVA-GI 213

Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
             + SSSGAT F+EP   VE NN   +L   E  E   IL+ L+  I +  REI    + 
Sbjct: 214 VHDQSSSGATLFIEPMSIVEMNNELRKLKLDEQEEIERILAELSKMIGEIAREIISNQEI 273

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
           + +ID  FA+   +  M G+ P L+       D S  I+  +HPLL              
Sbjct: 274 LEKIDFIFAKGKLSLEMKGIDPKLNK------DKSFVIKNGRHPLL-------------- 313

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
            +P K  + N+                   I +  E   +VITGPNTGGKT ++KT+GL 
Sbjct: 314 -DP-KKVIANT-------------------IYLGDEFHTLVITGPNTGGKTVTIKTVGLF 352

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
           +LM+++GL++PA     +  +D I ADIGD QS+EQ+LSTFS H++RIV IL+ V+ +SL
Sbjct: 353 ALMTQSGLHIPADFGSSMCVYDNIFADIGDEQSIEQSLSTFSSHMTRIVSILDKVTEDSL 412

Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
           V+ DE+G+GTDP EG ALA +IL+ +R      + TTHY++L          ENAA EF 
Sbjct: 413 VIFDELGAGTDPVEGAALAIAILEDVRMAGAKCIATTHYSELKNYALTKKGVENAAVEFD 472

Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
           +ETL PTYR+L G  G SNA  I+K +G    +I RA++ +     E +     +L Q++
Sbjct: 473 VETLSPTYRLLIGVPGKSNAFEISKKLGLSEFVINRAKEFINTENIELE-----DLLQNV 527

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE----LNF 610
            + R K E     A  L  EI  + R+ E E  +   +  + K K  ++ + E       
Sbjct: 528 EKNRIKAEEDRAEAEKLKTEI-QMIRDAEAEKLE---KLTNQKEKMMERARSEAFSITRQ 583

Query: 611 AKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
           AK ++D +++      ++ ++ E N  I++    +         D   S+  T  S   P
Sbjct: 584 AKEEVDEIIKRLRELEQERASKEKNRQIEQLRKELT--------DSMGSLQPTVKSMIVP 635

Query: 671 ----------QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
                     + GE V V +L  +  TVV         +VQ G M++ +   +++ I N 
Sbjct: 636 KVASKEIKNLKVGEDVKVITLNQE-GTVVSADDKKKEAVVQIGIMKMTLPYKSLQRIKNQ 694

Query: 721 KR 722
           ++
Sbjct: 695 QQ 696


>gi|170761509|ref|YP_001788443.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum A3 str. Loch Maree]
 gi|238688791|sp|B1L0S3.1|MUTS2_CLOBM RecName: Full=MutS2 protein
 gi|169408498|gb|ACA56909.1| MutS2 family protein [Clostridium botulinum A3 str. Loch Maree]
          Length = 788

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 187/563 (33%), Positives = 291/563 (51%), Gaps = 68/563 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           S+ E ++ L +T  A  ++ ++   P +   + DI   +  A  G  L P ++  +   L
Sbjct: 39  SVYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRNGIYLAEKGSALLPGQLLKIAAVL 96

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
           R      + +    E +      Y  L  + +    L ++EE+I   I+ +  I  DRAS
Sbjct: 97  RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEI-ADRAS 150

Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L  IR   +++N    + ++SL++  ++ +       + + T R  R  + +K  HK 
Sbjct: 151 SILYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKVEHKG 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL++L+A+I  +   +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           K   + V E+D  FA+A FA   +  CP ++ +  V       IEG +HPL         
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                        ++  E+             VPI +K+  E   ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL  LM+ +GL +PA+ +  + +F+ + ADIGD QS+EQ+LSTFS H+  IV+I++ 
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
               SLVL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     +    EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGAKIIATTHYSELKAYALRKEGVEN 462

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETLRPTYR+L G  G SNA  I+K +G    II  A++ +       +  R  
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517

Query: 549 ELYQSLMEERRKLESQARTAASL 571
           EL Q+L E+  K +  AR A +L
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENL 540


>gi|418620520|ref|ZP_13183324.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus hominis VCU122]
 gi|374822650|gb|EHR86670.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus hominis VCU122]
          Length = 783

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 201/680 (29%), Positives = 333/680 (48%), Gaps = 78/680 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ +E+  ++R ++ V N +K        + + + +Y  L 
Sbjct: 65  LSGLSKVSPLIHRAKIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQLLEEDEGVIKYPILN 123

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           E +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 124 ERMNQLPVLTDLYQEINE--KCDAYDLYDNASYELQGIRSKISSTTQRIRQNLDRIVKSQ 181

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   +IT R  R  + +KA ++     GI  + S+SG T ++EP   VE N
Sbjct: 182 ANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEMN 236

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N   RL N E  E   IL+ LT  +A ++         + +ID   A+A +A+ + G  P
Sbjct: 237 NQISRLRNDEAVERERILTELTGLVAANDNNCLVAESVMGQIDFLTAKARYARSIKGTKP 296

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
               +  V   ++       HPLL                       N +  V +  + I
Sbjct: 297 TFYKERTVYLPNAY------HPLL-----------------------NKDTVVANTIEFI 327

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
            D               V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F+
Sbjct: 328 DDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFE 375

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SLVL DE+G+GTDPSEG ALA SI
Sbjct: 376 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDELGAGTDPSEGAALAMSI 435

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L ++RD   L + TTHY +L           NA+ EF + TL PTY++L G  G SNA +
Sbjct: 436 LDHVRDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFD 495

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I+K +G    II +A+ ++     E           S++E    LE  ++       E+ 
Sbjct: 496 ISKKLGLGLNIINKAKTMIGTDEQE---------INSMIE---SLEKNSKRVDEQRIELE 543

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA--DEI 634
            L RE      DL+R+    K  E + + +  + A  +I +  ++ ++ L+D     D+ 
Sbjct: 544 KLLREARTTHDDLERQYQQYKNYEQKLMDEAKDKANQRIKSATKEADDILKDLREMRDKK 603

Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVV 689
            + +KE E     I +    +D +       +    ++     G++V V S G K   V+
Sbjct: 604 GADVKEHE----LIDKKKHLEDQYEAKSLKQNVKKQKWDDIHAGDEVKVLSYGQK-GEVL 658

Query: 690 EVPGDDDTVLVQYGKMRVRV 709
           E+ G+++ V VQ G +++++
Sbjct: 659 ELSGENEAV-VQMGIIKMKL 677


>gi|392423579|ref|YP_006464573.1| MutS2 family protein [Desulfosporosinus acidiphilus SJ4]
 gi|391353542|gb|AFM39241.1| MutS2 family protein [Desulfosporosinus acidiphilus SJ4]
          Length = 788

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 209/724 (28%), Positives = 351/724 (48%), Gaps = 85/724 (11%)

Query: 18  EESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           EE    L +T     +++  PL  +   ++I   L   + G ++   E+  +R TL+   
Sbjct: 43  EEVHFGLQETDEGKNLIRGNPLFSVRGAKEIRPYLERCLLGGVIHGEELLEIRDTLQ--- 99

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASED 134
            V ++L +  +   +S + +  L E+  +      LE++I  CI  D K   + D AS +
Sbjct: 100 -VGRRLKQFFQ---ESQEEFPRLWEVSLSIEPQKALEDEISRCIAEDGK---VADNASPE 152

Query: 135 L-ELIRAERK---RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L EL RA  +   R  E+L+  L+  A Q      +  P+IT+R  R  + IK  ++   
Sbjct: 153 LAELRRAIYRLQNRIRESLEGTLRNPAYQKM----LQDPIITQRSDRYVIPIKQEYRGAF 208

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
           P GI  + S+SGAT F+EP   V+  N    +   E  E   IL +L+A++      +  
Sbjct: 209 P-GIVHDQSASGATLFIEPMPVVQLGNELREVVLKEQREVQRILQMLSAQVETRAETVAD 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
           L + + ++D   A+A  +  M+   P L  +  +    +      +HPL+ G        
Sbjct: 268 LHEALAKLDFVLAKANLSVSMNAGAPELVEKQQLKLIQA------RHPLIGGKV------ 315

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                                         VP+ +++      +VITGPNTGGKT ++K 
Sbjct: 316 ------------------------------VPLSVELGIGFDTLVITGPNTGGKTVALKV 345

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           +GL + M+++GL++PA+++  +  F  I ADIGD QS+EQ+LSTFSGH+  IV+I++   
Sbjct: 346 IGLMAAMTQSGLHIPAESNSSMGVFSQIFADIGDEQSVEQSLSTFSGHMKNIVEIIDRSD 405

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLVL+DE+G+GTDP+EG ALA  IL  L  R    V TTHY  L     +  R +NA+
Sbjct: 406 ERSLVLLDEVGAGTDPTEGAALAMGILAELHSRGCRTVSTTHYGALKTFAYETPRVKNAS 465

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF  ETLRPTYR+L G  G SNA  IA+ +G    +++RA   V     ER+    ++L
Sbjct: 466 VEFDTETLRPTYRLLIGIPGKSNAFTIARRLGLSEGVLERANTFV----TEREMQ-VADL 520

Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
            ++L E  R++E +     S    +    + +E++++ LD     L     ++  + +  
Sbjct: 521 IENLGETHREIELEKEKVQSGRQAVEQQTKALEEKSQRLDEDYDLLMTLAKEEAAELVRE 580

Query: 611 AKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
           AK + + ++ + +  L+  +  + +  I+++      I  +++ D   +V +T +     
Sbjct: 581 AKREAEAIIAELKEALKKETKQQQD--IEKARQGFRRI--SNKLDKGRAVKQTGSGLSAD 636

Query: 671 Q--FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR--------VKKNNIRPIPNS 720
           Q   G+ V +  L  K   V+++P     VLVQ G M+V         V++  + P P S
Sbjct: 637 QIMLGQTVLMTKLRQK-GQVLKLPNASGEVLVQAGIMKVMVPLAELKLVREEKVSP-PKS 694

Query: 721 KRKN 724
            RK 
Sbjct: 695 SRKG 698


>gi|421860087|ref|ZP_16292245.1| mismatch repair ATPase [Paenibacillus popilliae ATCC 14706]
 gi|410830291|dbj|GAC42682.1| mismatch repair ATPase [Paenibacillus popilliae ATCC 14706]
          Length = 785

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 221/723 (30%), Positives = 361/723 (49%), Gaps = 94/723 (13%)

Query: 17  LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
            EE ++ L  T  A+ +  ++  P  L+ ++DI G L  A    +LS +E+  +   L A
Sbjct: 40  FEEVKRRLQATDEAMTVERLKGGP-PLAGVKDIRGALKRARIQAILSSTELWDISALLFA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
                  +    E      +   PLL+ L +  +   +LEE I  CID +  I LD+AS 
Sbjct: 99  ARRTKHHIAAVHE------EEAIPLLQDLAETISDQKQLEEDIRQCIDEQGEI-LDQASF 151

Query: 134 DLELIRAERK----RNMENLDSLLKKV-AAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
           +L  IR E +    R  E L+++++   AA++ Q     + LIT R  R  + +K  ++ 
Sbjct: 152 ELAAIRRELRTGETRIREKLEAMIRTSNAAKMLQ-----EQLITIRNDRYVIPVKQEYRS 206

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTAEIAKSE 245
               GI  + S SGAT F+EP+  V  NN    L  +++ EE  I   LS LT  +    
Sbjct: 207 HY-SGIVHDQSGSGATLFIEPEAIVAMNN---HLRETKLREEREIERILSRLTDRVGLIA 262

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
             ++Y    V  +D  FA+A  A+ M    P ++ +  +    +       HPL+     
Sbjct: 263 DVLEYDTGAVETLDFMFAKARLAREMKASLPRMNDRGFLKLRQAC------HPLI----- 311

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                      P                   +D  VPI +++      +++TGPNTGGKT
Sbjct: 312 -----------P-------------------ADQVVPIHVELGNSYTSILVTGPNTGGKT 341

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KT+GL SLM+ +GL++PA++  ++  FD I ADIGD QS+EQ+LSTFS H++ I+ I
Sbjct: 342 VTLKTIGLLSLMAMSGLFIPAEDGSQMCVFDTIYADIGDEQSIEQSLSTFSSHLTNIIRI 401

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDT 484
           LE ++ +SLVL+DE+G+GTDP+EG ALA +IL+++  R+G  +V TTHY++L     +  
Sbjct: 402 LEQMTPKSLVLLDEVGAGTDPAEGSALAIAILEHIH-RLGCRMVATTHYSELKAYAYERK 460

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
              NA+ EF ++TLRPTYR+L G  G SNA  IA+ +G  + II  A+  V       + 
Sbjct: 461 GVINASMEFDVQTLRPTYRLLIGVPGRSNAFAIAERLGLPKSIIDHARGEV-----TEED 515

Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEI----MDLYREIEDEAKDLDRRAAHLKAKE 600
            R   +  SL + R K E++  TA+ L  ++      L RE+E +  D ++R A  + K 
Sbjct: 516 MRVETMIASLEDNRLKAEAERETASKLRMDLEAMQQKLTRELEKQEADREKRQAQAEEKA 575

Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 660
              V +    A+ Q   ++ D   QL     +    ++ E+   +    +   P+   + 
Sbjct: 576 RAIVDK----ARRQAQEIIADL-RQLAMEGVEVKEHMLTEARKRL----DEAAPEAKLAA 626

Query: 661 SETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
                +    +   G+ V V SL  K  +VVE  G++   +VQ G M+++V  +++  + 
Sbjct: 627 KPKRQAKPARRIEAGDDVRVYSLNQK-GSVVEFVGEE--AVVQLGMMKMKVPLDDLELLS 683

Query: 719 NSK 721
           + K
Sbjct: 684 SVK 686


>gi|365135255|ref|ZP_09343723.1| MutS2 family protein [Subdoligranulum sp. 4_3_54A2FAA]
 gi|363612692|gb|EHL64223.1| MutS2 family protein [Subdoligranulum sp. 4_3_54A2FAA]
          Length = 795

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 224/753 (29%), Positives = 354/753 (47%), Gaps = 118/753 (15%)

Query: 12  PFGKSLEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
           P  ++ +E +  L QT A   ++ ++     S++E++ GI+  A  G +LS +E+  V  
Sbjct: 35  PAWETPDEVRAALEQTDAMTTLLIKNGSPRFSSVENVRGIVQRAEKGGVLSMAELLTVAD 94

Query: 71  TLRAVNNV--WKKLTEAAELDGDSL---QRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
           TLR    +  W  LTE   L  D L       P LE     + L+E E            
Sbjct: 95  TLRNFRELVKWYGLTEHDVLPVDDLFYAMTPQPTLEKTIKDSILSENE------------ 142

Query: 126 IILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
            + D AS+ L  IR    A      + LD++ K  +A  +    +   +++ R  R  V 
Sbjct: 143 -MADTASDTLYDIRRKIHAAENSIRDKLDAITKSQSASRY----LQDAVVSLRNGRFVVP 197

Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
           +KA H+  +  G+  +VSSSG+T F+EP   VE N   ++L N E AE   IL+  +A+ 
Sbjct: 198 VKAEHRGEV-GGVIHDVSSSGSTLFVEPTAVVEANAKILQLRNLEQAEIERILAAFSAQT 256

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
           A  E    +  + +LE+D+  A+A  A     + P       V+ D + ++   +HPL+ 
Sbjct: 257 AALEPMFTFGYEAMLELDVLLAKARLALDQKAMKP------QVNDDHAFSLVRARHPLID 310

Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
            + +                                   VP+DI +      +VITGPNT
Sbjct: 311 PAVV-----------------------------------VPVDIALGGAYDTLVITGPNT 335

Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
           GGKT ++KT GL   M++ G  +PA     +  F  IL DIGD QS+EQ+LSTFSGHI  
Sbjct: 336 GGKTVTLKTAGLLCAMAQHGYLIPAHESSSVCVFGEILVDIGDEQSIEQSLSTFSGHIKN 395

Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
           I  IL+L   ++LVL+DE+G+GTDP+EG ALA S+++ LR      + TTHY++L     
Sbjct: 396 ITGILKLAGPQTLVLMDELGAGTDPAEGAALAVSVIEALRGLGAKIMATTHYSELKIFAL 455

Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
                +NA+ EF++ETLRPTYR+  G  G SNA  I++ +G   +II+ A+   E L  E
Sbjct: 456 DTPGVQNASCEFNVETLRPTYRLSVGVPGKSNAFLISQKLGLAPEIIENAR---EHLSNE 512

Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL----- 596
            QQ     +   L + + +L++Q                  +DE + L   A+H      
Sbjct: 513 DQQF--DNILNQLEDLKVELKAQ------------------QDEVERLKHTASHALEQAE 552

Query: 597 --KAKETQQVQQELNFAKVQIDTVVQDFEN-------QLRDASAD-EINSLIKESESAIA 646
             +A   +Q ++EL  A+ +   +VQD +N       +LR    D ++N+  + + +   
Sbjct: 553 EKRAALIRQGEEELAAAREKAHGMVQDVQNTAYGLMDELRKLEKDKQLNASQRAARAREI 612

Query: 647 AIVEAHRPDDDFSVSETNTSSFTP----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
           A  E  +      V      +F P    + G++V +  L DK   V  +P  D  V V+ 
Sbjct: 613 AKKETEKLFGKTDVVHAPQRTFKPLDSVKLGQEVLIAEL-DKPGIVTALPDRDGMVEVRA 671

Query: 703 GKMRVRVKKNNI------RPIPNSKRKNAANPA 729
           G ++ +V  N +      +P P  K +    PA
Sbjct: 672 GIIKTKVPLNGLCAPHKQQPAPQKKYQPRRAPA 704


>gi|359411145|ref|ZP_09203610.1| MutS2 protein [Clostridium sp. DL-VIII]
 gi|357170029|gb|EHI98203.1| MutS2 protein [Clostridium sp. DL-VIII]
          Length = 786

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 219/736 (29%), Positives = 366/736 (49%), Gaps = 89/736 (12%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G  ++ K + P+    E + KL     A   ++    L L  + D    +  A  G  LS
Sbjct: 27  GKELINKLE-PYNNLYEINNKLEETNEALEILITKGNLPLEGLSDTHEGIERAKKGGTLS 85

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
           P ++  V   LRA +   K+  +  E++    + Y  L +L      +  LE +I   I 
Sbjct: 86  PEQLLRVGGMLRA-SRTTKEFFKREEVE----KAYPRLEDLAFILVPIKTLEAEIERAIV 140

Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMC 179
            +  I  D+AS+ L  IR    R ++  +S +++  + I ++    +   L T R  R  
Sbjct: 141 SEDEIS-DKASQTLYNIR----RTLKEKNSSVREKISSIVKSNSKYLQDDLYTMRGDRYV 195

Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
           + +K+ +K  +P G+  + SS+GAT+F+EP   V  NN    L   E AE   ILS L+ 
Sbjct: 196 LPVKSEYKSQVP-GLVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIERILSELSQ 254

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           ++  +  +    +  ++E+D  FA+A +A  ++ + PI      V+ D + +I   +HPL
Sbjct: 255 KVKMNAEQCLSNLKVLVELDFIFAKAKYASALNAIKPI------VNEDGTFSILSGRHPL 308

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           + G                                   D  VP D+ +  E + ++ITGP
Sbjct: 309 IEG-----------------------------------DKVVPSDVYLGKEFQTLMITGP 333

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KT+GL  +M  +GL +PA+++  +  F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 334 NTGGKTVTIKTVGLLHIMGLSGLLIPARDNSSIALFNEIFADIGDEQSIEQSLSTFSSHM 393

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           + IV+I++ V  +SL L DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L   
Sbjct: 394 TNIVNIMKHVDDKSLALFDELGAGTDPAEGAALAVSILETLRSRGAKLIATTHYSELKAY 453

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ER 537
             K    ENA+ EF +ETLRPTYR+L G  G SNA  I+K +G    +I+RA++ +  E 
Sbjct: 454 ALKTDGVENASVEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKEYMSEEN 513

Query: 538 LRPE---RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
           L+ E   R+   KS + +    E R L+ QA      + E +        E  D  R  A
Sbjct: 514 LQFENLIRELQEKSIIAKQEAREARMLKEQAEELKKKYEEKL--------EKLDNTREKA 565

Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFE--NQLRDASA-----DEINSLIKESESAIAA 647
           ++ A+  ++ ++ ++ AK + D +++      +L  +S      +E    +K+S  A   
Sbjct: 566 YMDAR--REAKEIISNAKDEADEILKAMRELEKLGISSGGRQRLEEERKKLKDSLEAKEK 623

Query: 648 IVEAHRPDDDFSVSETN--TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
            +   + ++  ++++ +    +F P   +QV V SL          P +   V V+ G M
Sbjct: 624 GIHNMKENEGEAITKVSLGMEAFLPSLNQQVIVTSL----------PDNKGEVQVEAGIM 673

Query: 706 RVRVKKNNIRPIPNSK 721
           ++ VK +++R    +K
Sbjct: 674 KINVKLSDLRKTKVTK 689


>gi|385799733|ref|YP_005836137.1| MutS2 family protein [Halanaerobium praevalens DSM 2228]
 gi|309389097|gb|ADO76977.1| MutS2 family protein [Halanaerobium praevalens DSM 2228]
          Length = 791

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 184/527 (34%), Positives = 268/527 (50%), Gaps = 67/527 (12%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE-AAELDGDSLQR-YSPLLELL 103
           DI   L  A  G +LS + I  VR T+RAV  + + L    + LD   ++R Y  + +L 
Sbjct: 70  DIREDLKKAAKGSVLSTTAISRVRNTIRAVFELKRYLNGIKSNLDPRIIEREYQKIYDLC 129

Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAA 158
            +      L  +I  C++ +   + D AS  L  +RA+ + ++EN     LDS++K    
Sbjct: 130 SDLQTTPSLAREIDRCLN-EYNEVADEASNKLRSLRAQIE-SIENSIRDKLDSIIKSKKY 187

Query: 159 Q-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
           Q I Q       ++T+R +R  V +K   +    DGI    S+SG T FMEP   V  NN
Sbjct: 188 QDILQEN-----IVTRRENRYVVPVKQEKRNSF-DGIVHGQSASGLTLFMEPMAVVRLNN 241

Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
               +   E  E   IL +L+++IA+SE  IK  +  +  +D   A A F+  +D  C  
Sbjct: 242 QLREVQAKENVEIQRILQMLSSKIAQSENIIKRNLMIISNLDSLAAAAKFS--LDFDC-- 297

Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
             +Q  V+    I ++  +HPLL                                     
Sbjct: 298 --NQPEVNESGIIELKKARHPLL------------------------------------G 319

Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
           + PVPID+K+  +   +VITGPNTGGKT ++KT+GL +LM++ GL++PA  +  +  F+ 
Sbjct: 320 EEPVPIDLKLGNDIATLVITGPNTGGKTVALKTVGLLTLMTQTGLHIPAAANSTISIFNK 379

Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
           I ADIGD QS+EQ+LSTFS H+ RI   L      +LVL+DE+G GTDP EG AL  SIL
Sbjct: 380 IFADIGDEQSIEQSLSTFSSHMHRIRKFLAESDNSTLVLMDELGVGTDPEEGAALGISIL 439

Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
           + L+++    + TTHY+ L          ENA+ EF L+TL+PTY+++ G  G SNA  I
Sbjct: 440 EKLQEKKATTIATTHYSQLKSYAYGTEEVENASVEFDLDTLKPTYKLIMGVPGGSNAFEI 499

Query: 518 AKSIGFDRKIIQRAQKL-------VERLRPERQQHRKSELYQSLMEE 557
           A  +G   +II RA+ L       VE +  E  Q R    YQ L  E
Sbjct: 500 ALRLGIPEEIIDRARSLLSEEEIKVEDIINELNQERNR--YQKLRHE 544


>gi|110799497|ref|YP_696563.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium perfringens ATCC 13124]
 gi|123344633|sp|Q0TP77.1|MUTS2_CLOP1 RecName: Full=MutS2 protein
 gi|110674144|gb|ABG83131.1| MutS2 family protein [Clostridium perfringens ATCC 13124]
          Length = 786

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 192/594 (32%), Positives = 302/594 (50%), Gaps = 59/594 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           I D AS+ L  IR    R+++  +S ++     I ++    +   L T R  R  + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            +K  +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              IK   + ++E+D  FA+A +   + G  PI++ +        I++   +HPL+    
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                       P                    D  V  DI +  E   ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KT GL  LM  +GL +PA  +  + +F+ I ADIGD QS+EQ+LSTFS H++ IV 
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           I+E  + +S VL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     K  
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
             ENA+ EF++ETLRPTYR+L G  G SNA  I++ +G    +I+ A+K++  E L+ E 
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
                 +L QSL E+  K E+ AR AA L  +        +++ + ++    ++ A   +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571

Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
           + +Q L+ AK + D ++++  +  R   S+D    L  E       I +A          
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           +        + G +  + S+  K+  V+  P +   V VQ G M++ VK  ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLR 684


>gi|402833826|ref|ZP_10882436.1| MutS2 family protein [Selenomonas sp. CM52]
 gi|402279672|gb|EJU28454.1| MutS2 family protein [Selenomonas sp. CM52]
          Length = 791

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 220/739 (29%), Positives = 355/739 (48%), Gaps = 91/739 (12%)

Query: 8   KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           +A +P G    E ++LL +T  A+ +       +  + DI   L  A  G +L   +   
Sbjct: 32  RAVLPSG-DFAEVEELLRETEEAVRLSAFSSPPMGGVFDIRESLAKAERGAVLDLGDFTD 90

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  T+RA+  V K+  +  E+D        PL+ E  K    L +LE ++   +D +   
Sbjct: 91  LLSTMRAMRAV-KRFFKEVEMD-------LPLIKEQAKGIEILGQLERRLENSVD-EHGN 141

Query: 127 ILDRASEDLELIRAERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           +LD AS +L  IR E +       E ++++L +   Q F        +IT+R  R  + I
Sbjct: 142 LLDDASVELSRIRRELRSGRRRAKEQMEAILHRTEYQKF----FQDAIITQRAERNVIPI 197

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           K  ++   P GI  + S+SGAT F+EP   V+ NN   +L+ +E  E   IL LL+ E+ 
Sbjct: 198 KQEYRQSFP-GIVHDQSASGATLFIEPMALVDLNNDLKQLALAEKTEVQRILRLLSQEVG 256

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           K+   ++     +  +D  FARA  A  M    P ++ +      ++      +HPL+  
Sbjct: 257 KNGSVLEGNCAILASLDFIFARAKLAADMQATRPAINREGRTKLVAA------RHPLIDA 310

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
           + +                                   VPIDI +    R+++ITGPNTG
Sbjct: 311 AKV-----------------------------------VPIDIALGESYRMLLITGPNTG 335

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT S+KT+GL +LM ++G Y+PA     +  +  +   IGD QS+EQ+LSTFS H+S +
Sbjct: 336 GKTVSLKTIGLFALMVQSGCYIPAAAGSEISVYTNVYTVIGDEQSIEQSLSTFSAHMSHL 395

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V +LE V    L+L+DEIG+GTDP EG ALA +IL+    R    +VTTHY++L      
Sbjct: 396 VKLLECVEGTDLLLLDEIGAGTDPEEGAALAMAILEQFLARGASTIVTTHYSELKTFAFT 455

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
               ENA  EF +ETLRPTYR+L G  G SNA  I++ +G     I RAQ+ ++    + 
Sbjct: 456 REGIENACVEFDVETLRPTYRLLTGMPGASNAFAISRRLGLSEAAILRAQQFIKADHAQF 515

Query: 543 QQHRKSELYQSLMEERRK---LESQARTAASLHAEIMDLYREIEDEAKDLDRRA----AH 595
           ++       + LM E+R    LE Q R  A L  +   L  EI ++ + + ++A    A+
Sbjct: 516 EKVVNQLESEKLMYEQRNADILERQQRV-AKLEEKTQALKDEIREKKEQMLKKARQESAN 574

Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPD 655
           L  +  ++ ++ +   KVQ D    D   + R  +  E    ++E+         A R  
Sbjct: 575 LVRRTRREAEEIIKSLKVQFD----DLGIESRRRAMQEAREKLQEA---------AERSR 621

Query: 656 DDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
                 +        Q    G+ V+V+ L D+ ATV+++ G +  + VQ G ++  VK  
Sbjct: 622 TGLLPGKAYKEKIDMQKLAVGDVVYVRKL-DQKATVLKIQGAN--IEVQLGNLKTYVKAG 678

Query: 713 NIRPIPNSKRKNAANPAPR 731
           + R +  ++++    PA R
Sbjct: 679 DCRFVERARKE---QPAAR 694


>gi|145351670|ref|XP_001420191.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580424|gb|ABO98484.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 502

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 156/425 (36%), Positives = 233/425 (54%), Gaps = 37/425 (8%)

Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL 170
           E+ E I  C+      +LD ASE L  IR E++R  E L ++L   + ++ +    ++  
Sbjct: 6   EVVEAIERCVSVPGGEVLDAASETLRAIRVEQRRIREELRTMLNATSKEMARKNFAERAQ 65

Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
           I  R  R C+ +K      LP G+ L+VS +G T F EP+ AV  NN    LS SE AE 
Sbjct: 66  IVTRLGRQCIPMKLGSAGELP-GVVLDVSGTGNTVFKEPQIAVPLNNALATLSASEDAEI 124

Query: 231 TAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
             IL  LT+ I ++  ++    +  L E+D+A ARA  A+W DG  P +     V  +  
Sbjct: 125 ERILVELTS-IVQTHADVLLDANEALTELDVANARARHAEWFDGAEPTI-----VDANQG 178

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
           + +  ++HPL      R     +                       + D  VPID  V+ 
Sbjct: 179 MCVRELQHPL-----FRHWRRGTD----------------------VRDVVVPIDFNVDS 211

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
             + V ITGPNTGGKTAS+K +G+A LM++AGLYLP ++   +P+F  ++AD+GD Q+LE
Sbjct: 212 SIKCVTITGPNTGGKTASLKAIGVACLMARAGLYLPCESGCEIPFFRHVIADLGDSQTLE 271

Query: 410 QN--LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
            +  LSTF  H+  +  IL+  + ++LVL+DE GSGTDP+EG +LA ++L  L     L 
Sbjct: 272 LDGGLSTFGAHLKGLQRILDAATDDTLVLLDEPGSGTDPAEGASLAVAVLNKLSRTSRLT 331

Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
           + T+HY ++          + AA EF L++L+PTYR+LWG TG SNAL+IA  +G +  I
Sbjct: 332 IATSHYEEVKEATLASDTAQVAAVEFDLQSLQPTYRLLWGETGKSNALHIAAGLGLEPWI 391

Query: 528 IQRAQ 532
           +  A+
Sbjct: 392 LAEAR 396


>gi|168215509|ref|ZP_02641134.1| MutS2 family protein [Clostridium perfringens NCTC 8239]
 gi|182382254|gb|EDT79733.1| MutS2 family protein [Clostridium perfringens NCTC 8239]
          Length = 786

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 192/594 (32%), Positives = 302/594 (50%), Gaps = 59/594 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           I D AS+ L  IR    R+++  +S ++     I ++    +   L T R  R  + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            +K  +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              IK   + ++E+D  FA+A +   + G  PI++ +        I++   +HPL+    
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                       P                    D  V  DI +  E   ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KT GL  LM  +GL +PA  +  + +F+ I ADIGD QS+EQ+LSTFS H++ IV 
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           I+E  + +S VL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     K  
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
             ENA+ EF++ETLRPTYR+L G  G SNA  I++ +G    +I+ A+K++  E L+ E 
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
                 +L QSL E+  K E+ AR AA L  +        +++ + ++    ++ A   +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571

Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
           + +Q L+ AK + D ++++  +  R   S+D    L  E       I +A          
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           +        + G +  + S+  K+  V+  P +   V VQ G M++ VK  ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLR 684


>gi|228476275|ref|ZP_04060977.1| MutS2 protein [Staphylococcus hominis SK119]
 gi|228269678|gb|EEK11180.1| MutS2 protein [Staphylococcus hominis SK119]
          Length = 783

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 200/680 (29%), Positives = 333/680 (48%), Gaps = 78/680 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ +E+  ++R ++ V N +K        + + + +Y  L 
Sbjct: 65  LSGLSKVSPLIHRAKIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQLLEEDEGVIKYPILN 123

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           E +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 124 ERMNQLPVLTDLYQEINE--KCDAYDLYDNASYELQGIRSKISSTTQRIRQNLDRIVKSQ 181

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   +IT R  R  + +KA ++     GI  + S+SG T ++EP   VE N
Sbjct: 182 ANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEMN 236

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N   RL N E  E   IL+ LT  +A ++         + +ID   A+A +A+ + G  P
Sbjct: 237 NQISRLRNDEAVERERILTELTGLVAANDNNCLVAESVMGQIDFLTAKARYARSIKGTKP 296

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
               +  V   ++       HP+L                       N +  V +  + I
Sbjct: 297 TFYKERTVYLPNAY------HPIL-----------------------NKDTVVANTIEFI 327

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
            D               V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F+
Sbjct: 328 DDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFE 375

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SLVL DE+G+GTDPSEG ALA SI
Sbjct: 376 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDELGAGTDPSEGAALAMSI 435

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L ++RD   L + TTHY +L           NA+ EF + TL PTY++L G  G SNA +
Sbjct: 436 LDHVRDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFD 495

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I+K +G    II +A+ ++     E           S++E    LE  ++       E+ 
Sbjct: 496 ISKKLGLGLNIINKAKTMIGTDEQE---------INSMIE---SLEKNSKRVDEQRIELE 543

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA--DEI 634
            L RE      DL+R+    K  E + + +  + A  +I +  ++ ++ L+D     D+ 
Sbjct: 544 KLLREARTTHDDLERQYQQYKNYEQKLMDEAKDKANQRIKSATKEADDILKDLREMRDKK 603

Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVV 689
            + +KE E     I +    +D +       +    ++     G++V V S G K   V+
Sbjct: 604 GADVKEHE----LIDKKKHLEDQYEAKSLKQNVKKQKWDDIHAGDEVKVLSYGQK-GEVL 658

Query: 690 EVPGDDDTVLVQYGKMRVRV 709
           E+ G+++ V VQ G +++++
Sbjct: 659 ELSGENEAV-VQMGIIKMKL 677


>gi|218134832|ref|ZP_03463636.1| hypothetical protein BACPEC_02735 [[Bacteroides] pectinophilus ATCC
           43243]
 gi|217990217|gb|EEC56228.1| MutS2 family protein [[Bacteroides] pectinophilus ATCC 43243]
          Length = 812

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 208/657 (31%), Positives = 320/657 (48%), Gaps = 82/657 (12%)

Query: 89  DGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN 148
           + DSL   +PL E L   + +T L  +I  CI  +  I  D AS++L+ IR + K   + 
Sbjct: 122 EADSL---TPLFESL---DPVTSLAAEIKRCILSEDEIS-DDASQNLKDIRRKIKAGQDK 174

Query: 149 ----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 204
               L SLL   + + +    +   +IT R  R C+ +KA +K  +P G+  + S++G+T
Sbjct: 175 IHTELTSLLNSASVRTY----LQDYVITTRNGRYCLPVKAEYKSNVP-GMVHDQSATGST 229

Query: 205 YFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFAR 264
           +F+EP   V+ NN    LS  E AE   IL+ +++  A+    I    + ++ +D AFA+
Sbjct: 230 FFIEPMSVVKLNNDLKELSLKEEAEIEVILARISSHCAEYADAILTDQESLVRLDFAFAK 289

Query: 265 AGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVEN 324
           A  +++     P+++   +      INI+  +HPL+    +                   
Sbjct: 290 ASLSRFYKCSRPVMNENGY------INIKKGRHPLIEPHHV------------------- 324

Query: 325 SEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 384
                           VPIDI +  +  +++ITGPNTGGKT S+KT+GL +LM ++GL +
Sbjct: 325 ----------------VPIDIWLGRDFDLLIITGPNTGGKTVSLKTVGLLTLMGQSGLNI 368

Query: 385 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 444
           PA ++  L  F  + ADIGD QS+EQ+LSTFS H++  V IL    R +L+L DEIG+GT
Sbjct: 369 PAFDNSELAVFKKVYADIGDEQSIEQSLSTFSSHMTNTVKILRYADRNTLILFDEIGAGT 428

Query: 445 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 504
           DP+EG ALAT+IL  L  R    + TTHY++L          ENA  EF +E+LRPTYR+
Sbjct: 429 DPTEGAALATAILANLHKRGIRTIATTHYSELKVYALSTPGVENACCEFDVESLRPTYRL 488

Query: 505 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 564
           L G  G SNA  I+  +G    II  AQ      R E Q  +  ++   L   R  LE +
Sbjct: 489 LIGVPGKSNAFAISSKLGLSDYIINDAQN-----RIETQDVKFEDVLTDLEGSRIALEEE 543

Query: 565 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID-------- 616
            R  A L  E   L  +++ E    + +   +  K + +  + L  AK   D        
Sbjct: 544 RREVAELKEEAARLKTQLQSERAKFNEQRDRILDKASTEAARILQEAKDYADETIRVMNK 603

Query: 617 --TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
               VQ+ E   R    D++NS    +   I+A  +   P +   V +   S FT   G 
Sbjct: 604 HGMTVQELEKS-RTKVRDKMNS----TRERISAGRKKDEPAEPRKVHK--PSEFT--LGT 654

Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
           +V V S+ + + TV   P     + VQ G +R +V  +++  I      NA +   R
Sbjct: 655 RVKVLSM-NLVGTVSTRPDARGNLFVQMGIIRSKVNISDLEIIEEDAFGNAISKGSR 710


>gi|410727381|ref|ZP_11365601.1| MutS2 family protein [Clostridium sp. Maddingley MBC34-26]
 gi|410598971|gb|EKQ53532.1| MutS2 family protein [Clostridium sp. Maddingley MBC34-26]
          Length = 786

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 221/732 (30%), Positives = 358/732 (48%), Gaps = 93/732 (12%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQL 59
           G A+V K + P+    E + KL  +T  AL ++  +  P  L  + DI   +  A  G  
Sbjct: 27  GKAMVDKLE-PYDNMYEINNKL-EETDEALEILITKGNP-PLEGLADIHEGIERAKKGGT 83

Query: 60  LSPSEICAVRRTLRAVNNVWKKLT-EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           LSP ++  V   LRA   + +    E AE      + Y  L +L      +  LE +I  
Sbjct: 84  LSPEQLLKVGGMLRAARTMKEFFKREEAE------KAYPRLEDLAYILVPIKALEAEIER 137

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRS 176
            I  +  I  D+AS+ L  IR    R+++  +S +++    I ++    +   L T R  
Sbjct: 138 AIVSEDEIS-DKASQTLYNIR----RSLKEKNSSVREKIGSIVRSNSKYLQDDLYTMRGD 192

Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
           R  + +K+ +K  +P G+  + SS+GAT+F+EP   V  NN    L   E AE   ILS 
Sbjct: 193 RYVIPVKSEYKSQVP-GLVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIERILSE 251

Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
           L+ ++  +  E    +  ++E D  FA+  +A  ++ V PI      V  D   +I   +
Sbjct: 252 LSLKVKNNSDECLSNLKVLVEFDFIFAKGRYASSLNAVKPI------VRDDGVFSILSGR 305

Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
           HPL+                P                    D  VP D+ +  E + ++I
Sbjct: 306 HPLI---------------EP--------------------DKVVPSDVYLGEEFQTLMI 330

Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
           TGPNTGGKT ++KT+GL  +M  +GL +PAK++  +  F  I ADIGD QS+EQ+LSTFS
Sbjct: 331 TGPNTGGKTVTIKTVGLLHIMGLSGLLIPAKDNSSIALFTEIFADIGDEQSIEQSLSTFS 390

Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
            H++ IV+I++ V  +SL L DE+G+GTDP+EG ALA SIL+ LR+R    + TTHY++L
Sbjct: 391 SHMTNIVNIMKHVDDKSLALFDELGAGTDPAEGAALAVSILETLRNRGAKLIATTHYSEL 450

Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
                K    ENA+ EF +ETL+PTYR+L G  G SNA  I+K +G    +I+RA+   E
Sbjct: 451 KAYALKTEGVENASVEFDIETLKPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAK---E 507

Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAA 594
            +  E  Q     L + L E+    + +AR A  L  +  +L R+ E++ + L+  R  A
Sbjct: 508 YMSEENLQF--ENLIRDLQEKSIIAKKEAREAKMLRDQAEELKRKYEEKLEKLEQTREKA 565

Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFEN-----------QLRDASADEINSLIKESES 643
           ++ A+  ++ ++ +  AK + D +++               Q  +    ++   ++E E 
Sbjct: 566 YMDAR--REAKEIIANAKDEADDILKAMRELEKLGIGSGGRQRLEEERKKLKESLEEKEK 623

Query: 644 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
            I  + E     +  +       +F P   ++V + S+          P +   V V+ G
Sbjct: 624 GIHKMKENE--GEVITKVTLGMEAFLPSLNQKVIITSM----------PDNKGEVQVEAG 671

Query: 704 KMRVRVKKNNIR 715
            M++ VK  ++R
Sbjct: 672 IMKINVKLKDLR 683


>gi|168206066|ref|ZP_02632071.1| MutS2 family protein [Clostridium perfringens E str. JGS1987]
 gi|170662410|gb|EDT15093.1| MutS2 family protein [Clostridium perfringens E str. JGS1987]
          Length = 786

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 192/594 (32%), Positives = 302/594 (50%), Gaps = 59/594 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           I D AS+ L  IR    R+++  +S ++     I ++    +   L T R  R  + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            +K  +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              IK   + ++E+D  FA+A +   + G  PI++ +        I++   +HPL+    
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                       P                    D  V  DI +  E   ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KT GL  LM  +GL +PA  +  + +F+ I ADIGD QS+EQ+LSTFS H++ IV 
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           I+E  + +S VL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     K  
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
             ENA+ EF++ETLRPTYR+L G  G SNA  I++ +G    +I+ A+K++  E L+ E 
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
                 +L QSL E+  K E+ AR AA L  +        +++ + ++    ++ A   +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571

Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
           + +Q L+ AK + D ++++  +  R   S+D    L  E       I +A          
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           +        + G +  + S+  K+  V+  P +   V VQ G M++ VK  ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLR 684


>gi|168214914|ref|ZP_02640539.1| MutS2 family protein [Clostridium perfringens CPE str. F4969]
 gi|170713649|gb|EDT25831.1| MutS2 family protein [Clostridium perfringens CPE str. F4969]
          Length = 786

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 192/594 (32%), Positives = 302/594 (50%), Gaps = 59/594 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           I D AS+ L  IR    R+++  +S ++     I ++    +   L T R  R  + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            +K  +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              IK   + ++E+D  FA+A +   + G  PI++ +        I++   +HPL+    
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                       P                    D  V  DI +  E   ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KT GL  LM  +GL +PA  +  + +F+ I ADIGD QS+EQ+LSTFS H++ IV 
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           I+E  + +S VL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     K  
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
             ENA+ EF++ETLRPTYR+L G  G SNA  I++ +G    +I+ A+K++  E L+ E 
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
                 +L QSL E+  K E+ AR AA L  +        +++ + ++    ++ A   +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571

Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
           + +Q L+ AK + D ++++  +  R   S+D    L  E       I +A          
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           +        + G +  + S+  K+  V+  P +   V VQ G M++ VK  ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLR 684


>gi|291545360|emb|CBL18468.1| MutS2 family protein [Ruminococcus sp. SR1/5]
          Length = 793

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 199/641 (31%), Positives = 310/641 (48%), Gaps = 77/641 (12%)

Query: 5   VVQKAQIPFGKSL----------EESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNS 53
           +  KA  P GK L          EE + +  QT  ALA + +   +   +++DI G L  
Sbjct: 18  LTDKASSPMGKDLCRKLTPSTDIEEIRAMQLQTHDALARLFKKGGISFGSVKDIRGTLKR 77

Query: 54  AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTE 111
              G  L+  E+ +V   L     V K  + +   DG  DSL      LE L      T 
Sbjct: 78  LTVGSALNAPELLSVCSLLENTGRV-KAYSRSDRDDGMTDSLDGMFAALEPL------TP 130

Query: 112 LEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGID 167
           L  +I  CI  +  I  D AS  L  IR    A   R    L SL+   A    Q     
Sbjct: 131 LSTEIRRCILSEDEIS-DDASSTLRQIRRSIKATNDRIHTQLSSLVAGSARNYLQ----- 184

Query: 168 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
             +IT R  R C+ +KA +K  +P G+  + S++G+T F+EP   V+ NN    L   E 
Sbjct: 185 DSVITMRDGRYCIPVKAEYKGQVP-GMIHDQSATGSTLFIEPMAVVKLNNDIRELELKEQ 243

Query: 228 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
            E   IL+ L+ ++A     I   +  ++++D  FARA  A  M+   P+ +++      
Sbjct: 244 KEIEVILASLSQQVAAELEAIHADLSIMVQLDFIFARAALAMDMNASEPVFNTEGR---- 299

Query: 288 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 347
             I +   +HPL+                    D + +               VPIDI++
Sbjct: 300 --IRLRQARHPLI--------------------DKKKA---------------VPIDIRL 322

Query: 348 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 407
             +  ++V+TGPNTGGKT S+KT+GL ++M ++GL++PA +   L  F  + ADIGD QS
Sbjct: 323 GDDFDLLVVTGPNTGGKTVSLKTVGLLTMMGQSGLHIPALDRSELALFREVYADIGDEQS 382

Query: 408 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
           +EQ+LSTFS H++ +V  L+   ++SLVL DE+G+GTDP+EG ALA +IL +L ++    
Sbjct: 383 IEQSLSTFSSHMTNVVSFLKSADQDSLVLFDELGAGTDPTEGAALAIAILSHLHEQGIRT 442

Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
           + TTHY++L          ENA  EF +ETLRPTYR+L G  G SNA  I+  +G    I
Sbjct: 443 MATTHYSELKIYALSTPGVENACCEFDVETLRPTYRLLIGVPGKSNAFAISSKLGLPDFI 502

Query: 528 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
           I +A++ +       Q     ++  SL + R  +E++    A    ++ +L + ++++ +
Sbjct: 503 IDKAKEQI-----SEQDESFEDVLTSLEQSRVTIENERAEIARYKEQVEELKKSLQEKEE 557

Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
            LD R   +  +  +Q    L   K   D  ++ F    +D
Sbjct: 558 KLDERKERILREANEQAHAILRDTKEYADQTMKLFHKFQKD 598


>gi|445059987|ref|YP_007385391.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus warneri SG1]
 gi|443426044|gb|AGC90947.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus warneri SG1]
          Length = 782

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 205/681 (30%), Positives = 345/681 (50%), Gaps = 81/681 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  +A  ++ +  G +L+ +E+ A++R ++ V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLTKVAQYIHRSTIGGVLNVTELNAIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
             +     LT+L + I    D   L   D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 SQMAQLPILTDLFKDINDKCDAHDL--YDHASYELQSIRSKISSTNQRIRQNLDRVVK-- 178

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
            +Q+ +   +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 179 -SQVNRKK-LSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT+++A  E +   L + ++  +D   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTSQVA-VESDALLLAESIMGHLDFLIAKARYARAIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P   ++  V   ++       HPLL        +   +N+     D+E            
Sbjct: 295 PTFHNERTVYLPNAY------HPLL------DHNTVVANTIEFVDDIE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++G+ +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R+   L + TTHY +L           NA+ EF +ETL PTY++L G  G SNA 
Sbjct: 434 ILDHVRNLGALVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
           +I+K +G    II +A+ ++     E     +S    S  + E+R +L+   + A + H 
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINNMIESLEKNSKRVDEQRIELDRLVKEAQTTHD 553

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
           E+   Y++ ++  K L   A   K K  Q+V+     A  + D ++++   +LRD    +
Sbjct: 554 ELEKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADAILKELR-ELRDKKGAD 605

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
               +KE E     I +  + DD +       +    ++     G++V V S G K   V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQNVQKQKYDKIQAGDEVKVLSYGQK-GEV 656

Query: 689 VEVPGDDDTVLVQYGKMRVRV 709
           +E+ GD++ V VQ G +++++
Sbjct: 657 LELVGDEEAV-VQMGILKMKL 676


>gi|417910746|ref|ZP_12554462.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU105]
 gi|418622194|ref|ZP_13184950.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU123]
 gi|420187633|ref|ZP_14693653.1| MutS2 family protein [Staphylococcus epidermidis NIHLM039]
 gi|341654934|gb|EGS78670.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU105]
 gi|374827569|gb|EHR91431.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU123]
 gi|394256075|gb|EJE01011.1| MutS2 family protein [Staphylococcus epidermidis NIHLM039]
          Length = 782

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 208/681 (30%), Positives = 335/681 (49%), Gaps = 81/681 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+  E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  +  +E +   + + V+ +ID   A+A +A  + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYAHTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P          D +I +    HPLL            +N+     DVE            
Sbjct: 295 PTFKE------DRTIYLPNTFHPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
           +I+K +G    II +A+ ++     E     +S  + S  + ++R +L+   R A   H 
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
            +   Y++ ++  K L   A   K K  Q+V+     A  + D ++++  N LRD    E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE 605

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
               +KE E     I +  + DD +            ++     G++V V S G K   V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656

Query: 689 VEVPGDDDTVLVQYGKMRVRV 709
           +E+ G+++ V VQ G +++++
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL 676


>gi|169343643|ref|ZP_02864642.1| MutS2 family protein [Clostridium perfringens C str. JGS1495]
 gi|169298203|gb|EDS80293.1| MutS2 family protein [Clostridium perfringens C str. JGS1495]
          Length = 786

 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 192/594 (32%), Positives = 302/594 (50%), Gaps = 59/594 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           I D AS+ L  IR    R+++  +S ++     I ++    +   L T R  R  + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            +K  +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              IK   + ++E+D  FA+A +   + G  PI++ +        I++   +HPL+    
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                       P                    D  V  DI +  E   ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KT GL  LM  +GL +PA  +  + +F+ I ADIGD QS+EQ+LSTFS H++ IV 
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           I+E  + +S VL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     K  
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
             ENA+ EF++ETLRPTYR+L G  G SNA  I++ +G    +I+ A+K++  E L+ E 
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
                 +L QSL E+  K E+ AR AA L  +        +++ + ++    ++ A   +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571

Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
           + +Q L+ AK + D ++++  +  R   S+D    L  E       I +A          
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           +        + G +  + S+  K+  V+  P +   V VQ G M++ VK  ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSRPDNKGEVQVQAGIMKINVKAKDLR 684


>gi|153940847|ref|YP_001392400.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum F str. Langeland]
 gi|384463373|ref|YP_005675968.1| MutS2 family protein [Clostridium botulinum F str. 230613]
 gi|189030427|sp|A7GHZ0.1|MUTS2_CLOBL RecName: Full=MutS2 protein
 gi|152936743|gb|ABS42241.1| MutS2 family protein [Clostridium botulinum F str. Langeland]
 gi|295320390|gb|ADG00768.1| MutS2 family protein [Clostridium botulinum F str. 230613]
          Length = 788

 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 181/532 (34%), Positives = 278/532 (52%), Gaps = 63/532 (11%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           + DI   +  A  G  L P ++  +   LR      + +    E +      Y  L  + 
Sbjct: 68  VYDIRNGIYLAEKGSALLPGQLLKIAAVLRCARRFKEYINHKEEEES-----YRVLENIC 122

Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE-RKRNM---ENLDSLLKKVAAQ 159
           +    L ++EE+I   I+ +  I  DRAS  L  IR   +++N    + ++SL++  ++ 
Sbjct: 123 EGIFSLPKIEEEIFNAIEGEDEI-ADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYSSY 181

Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
           +       + + T R  R  + +KA HK  +P G+  + SS+GAT F+EP   V  NN  
Sbjct: 182 L------QENIYTVRGDRYVLPVKAEHKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEI 234

Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
             L   E AE   IL++L+A+I  +   +K   + V E+D  FA+A FA   +  CP ++
Sbjct: 235 KELMLKEKAEIERILTVLSAKINANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTIN 294

Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
           ++  V       IEG +HPL                      ++  E+            
Sbjct: 295 NEGIVDI-----IEG-RHPL----------------------IDRREV------------ 314

Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
            VPI +K+  E   ++ITGPNTGGKT ++KT+GL  LM+ +GL +PA+ +  + +F+ + 
Sbjct: 315 -VPISVKLGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVF 373

Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
           ADIGD QS+EQ+LSTFS H+  IV+I++     SLVL DE+G+GTDP+EG ALA SIL+ 
Sbjct: 374 ADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGTDPTEGAALAISILEN 433

Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
           LR R    + TTHY++L     +    ENA+ EF +ETLRPTYR+L G  G SNA  I+K
Sbjct: 434 LRKRGTKIIATTHYSELKAYALRKEGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISK 493

Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
            +G    II  A++ +       +  R  EL ++L E+  K +  AR A +L
Sbjct: 494 RLGLPDYIIDFARENI-----SNENIRFEELIENLQEKSIKAQEDARLAENL 540


>gi|304440485|ref|ZP_07400372.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304370963|gb|EFM24582.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 786

 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 204/665 (30%), Positives = 337/665 (50%), Gaps = 70/665 (10%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L    +  V   LR V+ + KK  E  + +G S +    +  LL       ++E++I
Sbjct: 82  GGTLGARSLLNVADFLR-VSRLLKKYIEEEDDEGKSHEIIEDMASLLFTSK---QIEDRI 137

Query: 117 GFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
             CI  +  I  D AS  L  IR     + K+  E LDS++    ++  Q       ++T
Sbjct: 138 SECIISEEEI-SDSASPKLRQIRRNIFVKNKQIREKLDSIVNS-GSKYLQDN-----IVT 190

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
            R  R  + +K+ +K  +  G+  ++S++G T ++EP   V  NN    L   E  E   
Sbjct: 191 MREGRYVIPVKSENKNKIK-GLVHDMSATGQTAYIEPIAVVNLNNELKTLEIEEREEIER 249

Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
           IL+ L+A +A    +IK   D +  +D  FA+A  A  M+   P       ++ D S+ +
Sbjct: 250 ILAELSAYVADYSLQIKGNQDILSRLDFIFAKAKLAFEMEATKP------KINNDLSLKL 303

Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
              +HPLL  + +                                   VPIDI +  E  
Sbjct: 304 YKARHPLLKKNEV-----------------------------------VPIDISLGKEFT 328

Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
            ++ITGPNTGGKT ++KT+GL ++M++ GL++PA+   ++  FD I +DIGD QS+EQ+L
Sbjct: 329 SLIITGPNTGGKTVTLKTVGLLNIMAQYGLFIPAEEGSQVGIFDKIFSDIGDEQSIEQSL 388

Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
           STFS H+  IV+ILE     SLVL DE+G+GTDP+EG ALA SI+ ++ +R    + TTH
Sbjct: 389 STFSSHMVNIVNILENADERSLVLFDELGAGTDPTEGAALARSIMDFMLERKIRCISTTH 448

Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
           Y  L          +NA+ EF ++TLRPTYR++ G  G SNA  I+K +G    II+ A+
Sbjct: 449 YNQLKTYALTTEGVQNASMEFDVDTLRPTYRLIIGIPGKSNAFLISKRLGLRDDIIEDAK 508

Query: 533 KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE---IEDEAKDL 589
           K + +   E ++     + +++ ++R ++E   R+ A L+   +DL ++   +E+E   +
Sbjct: 509 KQMSQDSIEFEK-----VLENIEKDRWEIEKH-RSEAELYK--IDLEKQNKRLEEELASM 560

Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 649
             +   +  K  ++ +Q +N AK + +  + + ++ + + S D+   L +ES+  I   +
Sbjct: 561 KEKREDILEKARREARQIINRAKEESELALSEIKDVVSEVSKDQARRL-QESQDLIRENL 619

Query: 650 EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
                 D   +      +   + GE V + SL  K  TV+E+P  +  VLVQ G M+++V
Sbjct: 620 NKASKKDKILIEAVKNPAENIKPGETVMIASLNAK-GTVLELPDSNGDVLVQAGMMKMKV 678

Query: 710 KKNNI 714
           KK  I
Sbjct: 679 KKEAI 683


>gi|422346549|ref|ZP_16427463.1| MutS2 protein [Clostridium perfringens WAL-14572]
 gi|373226094|gb|EHP48421.1| MutS2 protein [Clostridium perfringens WAL-14572]
          Length = 786

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 191/594 (32%), Positives = 302/594 (50%), Gaps = 59/594 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           I D AS+ L  IR    R+++  +S ++     I ++    +   L T R  R  + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            +K  +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              IK   + ++E+D  FA+A +   + G  PI++ +        I++   +HPL+    
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                       P                    D  V  DI +  E   ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KT GL  LM  +GL +PA  +  + +F+ I ADIGD QS+EQ+LSTFS H++ IV 
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           I+E  + +S +L DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     K  
Sbjct: 399 IMEKANNKSFILFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
             ENA+ EF++ETLRPTYR+L G  G SNA  I++ +G    +I+ A+K++  E L+ E 
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
                 +L QSL E+  K E+ AR AA L  +        +++ + ++    ++ A   +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571

Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
           + +Q L+ AK + D ++++  +  R   S+D    L  E       I +A          
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           +        + G +  + S+  K+  V+  P +   V VQ G M++ VK  ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLR 684


>gi|420210593|ref|ZP_14716016.1| MutS2 family protein [Staphylococcus epidermidis NIHLM003]
 gi|394276044|gb|EJE20400.1| MutS2 family protein [Staphylococcus epidermidis NIHLM003]
          Length = 782

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 208/681 (30%), Positives = 336/681 (49%), Gaps = 81/681 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+  E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  +  +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P          D +I +    HPLL            +N+     DVE            
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKGTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
           +I+K +G    II +A+ ++     E     +S  + S  + ++R +L+   R A   H 
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
            +   Y++ ++  K L   A   K K  Q+V+     A  + D ++++  N LRD    E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDYKGAE 605

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
               +KE E     I +  + DD +            ++     G++V V S G K   V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656

Query: 689 VEVPGDDDTVLVQYGKMRVRV 709
           +E+ G+++ V VQ G +++++
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL 676


>gi|418616514|ref|ZP_13179438.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU120]
 gi|420182831|ref|ZP_14688964.1| MutS2 family protein [Staphylococcus epidermidis NIHLM049]
 gi|420214358|ref|ZP_14719637.1| MutS2 family protein [Staphylococcus epidermidis NIH05005]
 gi|420217164|ref|ZP_14722348.1| MutS2 family protein [Staphylococcus epidermidis NIH05001]
 gi|374820592|gb|EHR84668.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU120]
 gi|394249294|gb|EJD94507.1| MutS2 family protein [Staphylococcus epidermidis NIHLM049]
 gi|394283723|gb|EJE27888.1| MutS2 family protein [Staphylococcus epidermidis NIH05005]
 gi|394290520|gb|EJE34375.1| MutS2 family protein [Staphylococcus epidermidis NIH05001]
          Length = 782

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 208/681 (30%), Positives = 336/681 (49%), Gaps = 81/681 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+  E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  +  +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P          D +I +    HPLL            +N+     DVE            
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
           +I+K +G    II +A+ ++     E     +S  + S  + ++R +L+   R A   H 
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
            +   Y++ ++  K L   A   K K  Q+V+     A  + D ++++  N LRD    E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE 605

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
               +KE E     I +  + DD +            ++     G++V V S G K   V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656

Query: 689 VEVPGDDDTVLVQYGKMRVRV 709
           +E+ G+++ V VQ G +++++
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL 676


>gi|418325075|ref|ZP_12936285.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU071]
 gi|420185530|ref|ZP_14691622.1| MutS2 family protein [Staphylococcus epidermidis NIHLM040]
 gi|365228981|gb|EHM70153.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU071]
 gi|394254516|gb|EJD99485.1| MutS2 family protein [Staphylococcus epidermidis NIHLM040]
          Length = 782

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 208/681 (30%), Positives = 336/681 (49%), Gaps = 81/681 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+  E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  +  +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P          D +I +    HPLL            +N+     DVE            
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
           +I+K +G    II +A+ ++     E     +S  + S  + ++R +L+   R A   H 
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
            +   Y++ ++  K L   A   K K  Q+V+     A  + D ++++  N LRD    E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE 605

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
               +KE E     I +  + DD +            ++     G++V V S G K   V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656

Query: 689 VEVPGDDDTVLVQYGKMRVRV 709
           +E+ G+++ V VQ G +++++
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL 676


>gi|435854741|ref|YP_007316060.1| MutS2 family protein [Halobacteroides halobius DSM 5150]
 gi|433671152|gb|AGB41967.1| MutS2 family protein [Halobacteroides halobius DSM 5150]
          Length = 788

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 221/744 (29%), Positives = 349/744 (46%), Gaps = 101/744 (13%)

Query: 17  LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           +E  Q+ + + +  L+   + P     I DI   L     G +L   E+  +  T+ +  
Sbjct: 43  IESRQQEVTEATKILSRESAPPF--GGIYDIRSALKKVEKGAILGADELLDILITITS-- 98

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL- 135
              KKL        D    Y  +L++       + LE+KI   +D +  I  D AS  L 
Sbjct: 99  --GKKLRSYFLGLEDEDNEYVRILKISSQIETFSNLEQKIRKAVDNQGQI-KDSASSKLA 155

Query: 136 ---ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
                IR    R    L+S+L     Q +    I + ++T R  R  + +KA+ +   P 
Sbjct: 156 DLRRKIRNTSDRIKNKLNSILNSNRYQSY----IQESVVTIRDQRYVIPVKAAKQSDFP- 210

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           GI  + S+SG T F+EP   VE NN   +L + E  E   IL  L+ E+ K  + IK  +
Sbjct: 211 GIIHDKSASGQTVFIEPMPVVEINNKLQQLRSEEEEEIKRILQELSIEVEKRLQPIKETI 270

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
             +  +D  FA+A ++  ++   PIL+S+        IN+   +HPLL            
Sbjct: 271 KVLAVLDFIFAKAKYSIELEASEPILNSKGQ------INLIKARHPLLT----------- 313

Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
                   DV                  VPID+++      +VITGPNTGGKT S+KT+G
Sbjct: 314 -------EDV------------------VPIDVQLGDNFASLVITGPNTGGKTVSLKTIG 348

Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
           L ++M +AGL++PA +  +L  F+ + ADIGD QS+EQNLSTFS H+++I+ I+E  S  
Sbjct: 349 LLTIMGQAGLHVPALSGSKLAIFNQVYADIGDEQSIEQNLSTFSSHMTQIIKIVERASIN 408

Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
           SLVL+DE+G+GTDP EG ALA  IL YL  +    V TTHY++L          ENA+ E
Sbjct: 409 SLVLLDELGAGTDPVEGSALARGILDYLHQQGAKTVATTHYSELKTYAYNQDGVENASVE 468

Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
           F +ETL PTY +  G  G SNA  IA  +G   +II +A + +++   E        + +
Sbjct: 469 FDVETLAPTYNLQMGLPGRSNAFQIASRLGLSDEIIDKASQFLDQEDIEL-----DNIIK 523

Query: 553 SLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN--- 609
            + E++R+ + +  +A     +  +L  E E + K L+ +    K +E ++  +E N   
Sbjct: 524 QIEEDKREYQQKKESAQENKRQARELREEYEAKLKKLEAQ----KEREMKEAYREANKII 579

Query: 610 -FAKVQIDTVVQDF--ENQLRDASADEINSLIKESESAIA----AIVEAHRPDDDFSVSE 662
             A+ + + ++ +   + QL D   +   S ++E    +      ++EA R   +     
Sbjct: 580 KRAQQKANKIIDELKEQRQLNDRKIEGARSELREERKDLKEERQELIEAKREQKEVP--- 636

Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV------------- 709
                   + G++V + +L  K   V+E+    +  LVQ G M+V V             
Sbjct: 637 ------DIKVGDKVKLSNLNQK-GKVLEIHSGKEEALVQAGIMKVTVDLRELEKTTIESK 689

Query: 710 KKNNIR-PIPNSKRKNAANPAPRL 732
             NN R  I   K   A N +P L
Sbjct: 690 TNNNTRVNISQVKSNKAKNISPEL 713


>gi|295105593|emb|CBL03137.1| MutS2 family protein [Faecalibacterium prausnitzii SL3/3]
          Length = 804

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 223/736 (30%), Positives = 342/736 (46%), Gaps = 132/736 (17%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLE 101
           +E ++ +   AV G +LS  E+  V   LR   ++  W   +E   L  D L  Y+   E
Sbjct: 68  VEGVSQLAARAVKGGVLSMGELLMVAGALRNFQHLTSWYGSSEHDALPTDDL-FYALAPE 126

Query: 102 LLKNCNFLTELEEKIGFCI---DCKLLIILDRASEDL-EL---IRAERKRNMENLDSLLK 154
                     LE++I   I   D     + D AS  L EL   IRA      + L+S+++
Sbjct: 127 --------PGLEQQISSAILAPDA----MADTASRTLAELRKKIRATENSIRDRLESMVR 174

Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
            +    +    + + +++ R  R  V +K+ ++  +  GI  +VSS+GAT F+EP+  VE
Sbjct: 175 NMDTSKY----LQESVVSMRNGRYVVPVKSEYRGEV-SGIIHDVSSTGATVFVEPQAVVE 229

Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
            N   ++    E  E   IL   TA++A  E + +Y    +LEID+  A+A  A  +   
Sbjct: 230 ANARILQYRAQEAQEIERILVAFTAQVAAIEPQFQYSYKAMLEIDILLAKARLALELKAF 289

Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
            P       V  DSS N+   +HPL+               +P K               
Sbjct: 290 KPA------VRTDSSFNLIRARHPLI---------------DPQKC-------------- 314

Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
                 VP+DI +  E   ++ITGPNTGGKT ++KT GL   M++ G  +PA     +  
Sbjct: 315 ------VPVDIALGGEYDSLIITGPNTGGKTVTLKTAGLLCAMAQCGFLIPADERSEICV 368

Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
           FD  L DIGD QS+EQ+LSTFSGH+ +I  ILEL    +LVL+DE+G+GTDP+EG ALA 
Sbjct: 369 FDEFLVDIGDEQSIEQSLSTFSGHMKKITGILELAMPHTLVLLDELGAGTDPAEGAALAV 428

Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
           +I++ LR R  L + TTHYA+L     +     NA+ EF LETLRPTY++  G  G SNA
Sbjct: 429 AIIEELRRRGVLLMATTHYAELKVFALETKGVVNASCEFDLETLRPTYKLSVGVPGKSNA 488

Query: 515 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 574
             I++ +G   ++I+ AQ                   Q L  E ++L++       L  +
Sbjct: 489 FLISEKLGIPSRVIEAAQ-------------------QHLSAEDKRLDAVLGQLDDLKLQ 529

Query: 575 IMDLYREIEDEAKDLDRRAAH-LKAKE------TQQVQQELNFAKVQIDTVVQDFENQ-- 625
           +    +E ++E + L   A+H L+A         QQ + EL  A+ +  T+ Q  E Q  
Sbjct: 530 L----KESQNEVEQLRNEASHQLEAARKKRDELIQQGENELEAARAKARTLAQQVETQAY 585

Query: 626 -----LRDASADEINS-----------LIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
                LR    DE  S             KE+E   A     H P             F 
Sbjct: 586 ALTDELRQLQKDERMSAQQKAQRAREIAKKETEKLFAGTEVVHNP----------VKEFV 635

Query: 670 P----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
           P    + G++V +  L ++LATV+ +P  +  VLV+ G ++ +V    ++  P    K +
Sbjct: 636 PLKDVKVGQEVCIAEL-NQLATVLALPDKNGDVLVRAGIIKTKVPLKGLKQ-PEKLVKES 693

Query: 726 ANPAPRLRKQVCTCTS 741
             P  + +++    T 
Sbjct: 694 TAPKTKAQQRYSRLTG 709


>gi|314936676|ref|ZP_07844023.1| DNA mismatch repair protein MutS [Staphylococcus hominis subsp.
           hominis C80]
 gi|313655295|gb|EFS19040.1| DNA mismatch repair protein MutS [Staphylococcus hominis subsp.
           hominis C80]
          Length = 783

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 200/680 (29%), Positives = 331/680 (48%), Gaps = 78/680 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ +E+  ++R ++ V N +K        + + + +Y  L 
Sbjct: 65  LSGLSKVSPLIHRAKIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQLLEEDEGVVKYPILN 123

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           E +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 124 ERMNQLPVLTDLYQEINE--KCDAYDLYDNASYELQGIRSKISSTTQRIRQNLDRIVKSQ 181

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   +IT R  R  + +KA ++     GI  + S+SG T ++EP   VE N
Sbjct: 182 ANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEMN 236

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N   RL N E  E   IL+ LT  +A  +         + +ID   A+A +A+ + G  P
Sbjct: 237 NQISRLRNDEAVERERILTELTGLVAADDNNCLVAESVMGQIDFLTAKARYARSIKGTKP 296

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
               +  V   ++       HPLL                       N +  V +  + I
Sbjct: 297 TFYKERTVYLPNAY------HPLL-----------------------NKDTVVANTIEFI 327

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
            D               V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F+
Sbjct: 328 DDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFE 375

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SLVL DE+G+GTDPSEG ALA SI
Sbjct: 376 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDELGAGTDPSEGAALAMSI 435

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L ++RD   L + TTHY +L           NA+ EF + TL PTY++L G  G SNA +
Sbjct: 436 LDHVRDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFD 495

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I+K +G    II +A+ ++     E           S++E    LE  ++       E+ 
Sbjct: 496 ISKKLGLGLNIINKAKTMIGTDEQE---------INSMIE---SLEKNSKRVDEQRIELE 543

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA--DEI 634
            L RE      DL+R+    K  E + + +  + A  +I +  ++ ++ L+D     D+ 
Sbjct: 544 KLLREARTTHDDLERQYQQYKNYEQKLMDEAKDKANQRIKSATKEADDILKDLREMRDKK 603

Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVV 689
            + +KE E     I +    +D +       +    ++     G++V V S G K   V+
Sbjct: 604 GADVKEHE----LIDKKKHLEDQYEAKSLKQNVKKQKWDDIHAGDEVKVLSYGQK-GEVL 658

Query: 690 EVPGDDDTVLVQYGKMRVRV 709
           E+ G+ + + VQ G +++++
Sbjct: 659 ELSGEHEAI-VQMGIIKMKL 677


>gi|414153028|ref|ZP_11409355.1| MutS2 protein [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
 gi|411455410|emb|CCO07257.1| MutS2 protein [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
          Length = 783

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 207/658 (31%), Positives = 315/658 (47%), Gaps = 95/658 (14%)

Query: 21  QKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           ++ L +TS    +++  PL +LS   DI   L       +L+  E+ AV  TL A   + 
Sbjct: 43  KRRLAETSEGRELLRLDPLAELSGWHDIRDALARVSRYAVLAAEELLAVGETLAASRRIK 102

Query: 80  KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
           K   E +        RY  L E+  +     +LE+ I   I      I D AS  L  IR
Sbjct: 103 KFFNEKS-------HRYPLLSEIAASLTQQPQLEKDILRAI-LPGGEIADHASPQLLQIR 154

Query: 140 A----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                 + R  E ++S+++    Q +    + +P++T R+ R  + +K  ++  +P GI 
Sbjct: 155 RGILRAQNRIRERVESIIRAPENQKY----LQEPIVTVRQDRYVIPVKQEYRNQIP-GIV 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
            + S+SGAT F+EP   V+ NN   RL  +E  E   IL+ L+  ++   +E+   +  +
Sbjct: 210 HDQSASGATLFVEPLAVVDANNEVRRLMAAEKQEIQRILAELSQGVSAVAQELSLALQAL 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            E+D   ARA ++  +    P ++  S       I I+  +HPLL G +           
Sbjct: 270 AELDYIMARARYSLKLKAWSPQITEGS-----PYIYIKQGRHPLLPGDA----------- 313

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP  I++    + +VITGPNTGGKT ++KT+GL +
Sbjct: 314 -------------------------VPATIELGKNFKTLVITGPNTGGKTVTLKTVGLFA 348

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM++AGL++PA+    +  +  I ADIGD QS+EQ+LSTFS H++ IV IL+ V  +SLV
Sbjct: 349 LMTQAGLHIPAEAGTTMGVYKKIFADIGDEQSIEQSLSTFSSHMTNIVHILQQVDEDSLV 408

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L+DE+G+GTDP+EG ALA +IL+ L +R    + TTHY++L          ENA+ EF  
Sbjct: 409 LLDELGAGTDPTEGAALARAILEELHNRGACTIATTHYSELKNYAYTTPGVENASVEFDA 468

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LVERLRPERQQ 544
           ETLRPTYR+L G  G SNA  I+  +G    I+ RA++           L+ +L   +Q 
Sbjct: 469 ETLRPTYRLLIGRPGRSNAFEISARLGLRPDIVNRARQFLTTEQVQVAELINKLEKTQQA 528

Query: 545 -----------HRKSELYQSLMEERRKLESQARTA-----ASLHAEIMDLYR----EIED 584
                       R+SE    L EE R+L  + RT      A  H E     R    E E+
Sbjct: 529 AEKDRAAAAALRRESE---QLQEEYRRLAEELRTKKEEILARAHEEAGSFVRRARLEAEE 585

Query: 585 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
             K+L  R A    K  ++  Q+      Q+   V     Q   A+A E+   +K  E
Sbjct: 586 AVKELRARLAEENTKNREEAIQQARSKLQQVTNKVTTGAPQ--PAAAGEVPDQVKPGE 641


>gi|116072695|ref|ZP_01469961.1| MutS 2 protein [Synechococcus sp. BL107]
 gi|116064582|gb|EAU70342.1| MutS 2 protein [Synechococcus sp. BL107]
          Length = 779

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 227/730 (31%), Positives = 371/730 (50%), Gaps = 73/730 (10%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
           MG    +  Q+P   SL E+ +   +T   A L  +    L   ++ D+  +L   + G 
Sbjct: 13  MGLEAARATQLPH--SLAETLQRQAETVEMAVLDDLTEGGLSFRSVNDLRPVLLRCLKGG 70

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           + S  E+ AV  TL A   + +++        D  +       L++    L +LE+++ F
Sbjct: 71  VASGEELLAVAGTLAAARKLRRQI--------DDPELRPVCTALIETMVTLPDLEQRLKF 122

Query: 119 CIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
            ++ +   + DRAS  L  +R +    R+   + L  L ++ A+  F    +   +I +R
Sbjct: 123 SLE-EGGRVADRASPPLAGLRQQWHGLRQERRDKLQELTRRYAS--F----LQDSVIAQR 175

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R  + +KA     +  G   + S+SG T F+EP+  +   N  V +      EE  +L
Sbjct: 176 HGRPVLAVKAGAVGQV-SGQVHDSSASGNTVFIEPRSVLTMGNKLVDIEARIRKEEQRVL 234

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
           + L+  +A+ E  +  L++ +L +DLA AR  + +W+  V P LS      F     +  
Sbjct: 235 AELSDLVAQDEPVLNSLVEILLALDLALARGRYGRWLGAVPPNLSEDPEAPF----LLRD 290

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
           ++HPLL+    RS      + +P+                      VPI + V  + RVV
Sbjct: 291 LRHPLLIWQHKRS------SGSPV----------------------VPISVDVSAQLRVV 322

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
            ITGPNTGGKT S+K+LGLA+LM++AG+ LP    P LPW   +LADIGD QSL+Q+LST
Sbjct: 323 AITGPNTGGKTVSLKSLGLAALMARAGMLLPCSGQPSLPWCPQVLADIGDEQSLQQSLST 382

Query: 415 FSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           FSGHI RI  IL  +      +LVL+DE+G+GTDPSEG ALAT++L+ L DR  L + TT
Sbjct: 383 FSGHIKRIGRILHALESGPAPALVLLDEVGAGTDPSEGTALATALLKALADRARLTIATT 442

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           H+ +L  LK  D RFENA+  F+ ETL PTY +LWG  G SNAL IA  +G D  ++ +A
Sbjct: 443 HFGELKALKYSDDRFENASVAFNAETLSPTYELLWGIPGRSNALAIATRLGLDAGVLDQA 502

Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
           Q L+        +   + + Q L  +R++ ++ A  AA+L A    L+ E+    +   +
Sbjct: 503 QALLA----PAAEGEVNTVIQGLEAQRQRQQAAAEDAAALLARTELLHEELLLRWQKQKQ 558

Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA 651
           + A  + +  Q+++Q +   + ++ ++++    +LRD  AD      +++   +  + + 
Sbjct: 559 QTALHQEQGRQRLEQSIREGQNEVRSLIR----RLRDDRAD--GETARKAGQRLRKLEDH 612

Query: 652 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
           HRP  +          + P+ GE+V + +L  K A V+ +  D   + V+ G MR  V+ 
Sbjct: 613 HRPTKE---KRAPKPGWRPEVGERVRLLALA-KAAEVLAISDDGLQLTVRCGVMRSTVEL 668

Query: 712 NNIRPIPNSK 721
           N +  +   K
Sbjct: 669 NAVESLDGRK 678


>gi|429728985|ref|ZP_19263676.1| MutS2 family protein [Peptostreptococcus anaerobius VPI 4330]
 gi|429146586|gb|EKX89637.1| MutS2 family protein [Peptostreptococcus anaerobius VPI 4330]
          Length = 809

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 209/753 (27%), Positives = 362/753 (48%), Gaps = 82/753 (10%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
           +G  +++K   PF K  +  + L   T A   +++   + +  I +I  +   A  G +L
Sbjct: 29  LGRNIIKKLN-PFSKYDQVKEALEETTEAQSILIKRGHVSMQGIHNIEDMAKRADIGGVL 87

Query: 61  SPSEICAVRRTLRAVNNVWKKLT-----------EAAELDGDSLQRYSPLLELLKNCNFL 109
             + +  V  T+RA   +   L+           E +  D + + RY P+++ +    ++
Sbjct: 88  DNASLIKVADTMRATRILSNLLSGDIKVETFGNAENSNKDKEEVTRY-PIIQTMAQSLYV 146

Query: 110 -TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
             ++E+ I   I   + +  D AS +L +IR    +  +N+ S L  + +       +  
Sbjct: 147 HRDVEDAIYNAIVSDIEV-SDNASSELRMIRRRILQKNQNIRSKLNSIISSTSYQKYLQD 205

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
            +I+ R  R  + +KA ++ ++  GI  + S SGAT F+EP   VE NN   +L   E  
Sbjct: 206 AIISMRGDRFVIPVKAEYRSVIS-GIIHDQSQSGATLFIEPMSIVEMNNDLRQLKLQETE 264

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ L+  + +  RE+    + +  +D AFA+   +  M  V PIL+       D 
Sbjct: 265 EIERILAELSGMVGEVARELISNQEILGRLDFAFAKGKLSIAMKAVDPILNR------DK 318

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
           S  I   +HPL+            +N+  L  D  +                        
Sbjct: 319 SFRIVKGRHPLI------DKKTVVANTVYLGKDFSS------------------------ 348

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
                ++ITGPNTGGKT ++K +GL SLM++ GL++PA     +  FD + ADIGD+QS+
Sbjct: 349 -----LLITGPNTGGKTVTIKMVGLFSLMTQCGLHIPADFGTSMCVFDQVFADIGDNQSI 403

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQNLSTFS H++ IV+I++ V+ +SLV+ DE+G+GTDP EG ALA +IL+ +R    L +
Sbjct: 404 EQNLSTFSSHMTSIVNIVDRVTEDSLVIFDELGAGTDPEEGAALAIAILEDIRTVGALCI 463

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L          ENAA EF +ETL PTYR+L G  G SNA  I++ +G +  +I
Sbjct: 464 ATTHYSELKKYALAKKGVENAAVEFDMETLSPTYRLLIGVPGKSNAFEISRKLGLNESVI 523

Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
             A+  ++    E +     ++ QS+ + R K+E +   A ++ +EI +   E ED+ K 
Sbjct: 524 LNAKFYMDNDDIELE-----DVLQSVEKNRLKIEEELSRAEAMRSEIENRKNEYEDKIKK 578

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
           L+   A +      +    +  AK + + +++      R++++ + +  I+E    I   
Sbjct: 579 LEESKAKVMENARSEAFSIVRQAKEETEVLIKKLRKLERESASKDKDRRIEEIRREIGQT 638

Query: 649 VEAHRPDDDFSVSETNTSSFTPQF----------GEQVHVKSLGDKLATVVEVPGDDDTV 698
           +   +P        +  S   P+F          G++V++ SL  +  TV+    +    
Sbjct: 639 MGGLQP--------SLESMVVPKFASKEIKSLKAGQEVNIVSLRQE-GTVISADDNKKEA 689

Query: 699 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
           +VQ G M++ +   +++ I   K KN      R
Sbjct: 690 VVQVGIMKMTLPYKSLKIIE-KKDKNTVTRTTR 721


>gi|314933341|ref|ZP_07840706.1| DNA mismatch repair protein MutS [Staphylococcus caprae C87]
 gi|313653491|gb|EFS17248.1| DNA mismatch repair protein MutS [Staphylococcus caprae C87]
          Length = 782

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 208/680 (30%), Positives = 338/680 (49%), Gaps = 79/680 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ SE+  ++R ++ V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLIHRANIGGVLNVSELNVIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           E +     LT+L ++I     C    + D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 EKMNQLPVLTDLFQEIKD--KCDTYDLFDHASYALQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           + Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 SNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPTSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N   RL N E  E   IL+ LT ++A     I      + +ID   A+A +A+ + G  P
Sbjct: 236 NQISRLRNDEAVERERILTELTGQVAVDADSILIAESVMGQIDFLIAKARYARSIKGTKP 295

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
               +  V   ++       HPLL                       + E  V +  + I
Sbjct: 296 TFKKERTVYLPNAF------HPLL-----------------------DKETVVANTIEFI 326

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
            D               V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F+
Sbjct: 327 DD------------VETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLVPTLDGSQLSIFE 374

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            +  DIGD QS+EQ+LSTFS H+  IV+IL    + SL+L DE+G+GTDPSEG ALA SI
Sbjct: 375 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEGAALAMSI 434

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L Y+R+   L + TTHY +L           NA+ EF+++TL PTY++L G  G SNA +
Sbjct: 435 LDYVRNLGSLVMATTHYPELKAYSYNCEGVMNASVEFNVDTLSPTYKLLMGVPGRSNAFD 494

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHAE 574
           I+K +G    II +A+ ++     E     +S    S  + E+R +L+   R A   H  
Sbjct: 495 ISKKLGLSLNIINKAKTMIGTDEQEINSMIESLERNSKCVDEQRIELDRLVREAQETHDA 554

Query: 575 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
           +   Y++ ++  + L   A   K K  Q+V+     A  + DT++++  + LRD    E 
Sbjct: 555 LAKQYQQYQNYEQSLMNEA---KEKANQRVKS----ATKEADTILKELRD-LRDNKGAE- 605

Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVV 689
              +KE E     I +  + DD +       +    ++     G++V V S G K   V+
Sbjct: 606 ---VKEHE----LIDKKKQLDDQYEAKSIKQTVQKKKYDKINAGDEVKVLSYGQK-GEVL 657

Query: 690 EVPGDDDTVLVQYGKMRVRV 709
           E+ G+D+ V VQ G +++++
Sbjct: 658 ELVGEDEAV-VQMGIIKMKL 676


>gi|168211671|ref|ZP_02637296.1| MutS2 family protein [Clostridium perfringens B str. ATCC 3626]
 gi|170710370|gb|EDT22552.1| MutS2 family protein [Clostridium perfringens B str. ATCC 3626]
          Length = 786

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 192/594 (32%), Positives = 302/594 (50%), Gaps = 59/594 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           I D AS+ L  IR    R+++  +S ++     I ++    +   L T R  R  + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNYIVRSNAQYLQDSLYTVRGDRYVIPVKA 200

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            +K  +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              IK   + ++E+D  FA+A +   + G  PI++ +        I++   +HPL+    
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLIDARHPLI---- 309

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                       P                    D  V  DI +  E   ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KT GL  LM  +GL +PA  +  + +F+ I ADIGD QS+EQ+LSTFS H++ IV 
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVR 398

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           I+E  + +S VL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     K  
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
             ENA+ EF++ETLRPTYR+L G  G SNA  I++ +G    +I+ A+K++  E L+ E 
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
                 +L QSL E+  K E+ AR AA L  +        +++ + ++    ++ A   +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571

Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
           + +Q L+ AK + D ++++  +  R   S+D    L  E       I +A          
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           +        + G +  + S+  K+  V+  P +   V VQ G M++ VK  ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLR 684


>gi|170755146|ref|YP_001782757.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum B1 str. Okra]
 gi|429246442|ref|ZP_19209762.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum CFSAN001628]
 gi|229486369|sp|B1IMK5.1|MUTS2_CLOBK RecName: Full=MutS2 protein
 gi|169120358|gb|ACA44194.1| MutS2 family protein [Clostridium botulinum B1 str. Okra]
 gi|428756532|gb|EKX79084.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum CFSAN001628]
          Length = 788

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 187/563 (33%), Positives = 292/563 (51%), Gaps = 68/563 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           S+ E ++ L +T  A  ++ ++   P +   + DI   ++ A     L P ++  +   L
Sbjct: 39  SVYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKRSTLLPGQLLKIAAVL 96

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
           R      + +    E +      Y  L  + +    L ++EE+I   I+ +  I  DRAS
Sbjct: 97  RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEIA-DRAS 150

Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L  IR   +++N    + ++SL++  ++ +       + + T R  R  + +KA HK 
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL++L+A+I  +   +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           K   + V E+D  FA+A FA   +  CP ++ +  V       IEG +HPL         
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                        ++  E+             VPI +K+  E   ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL  LM+ +GL +PA+ +  + +F+ + ADIGD QS+EQ+LSTFS H+  IV+I++ 
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
               SLVL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     K    EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALKKEGVEN 462

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETLRPTYR+L G  G SNA  I+K +G    II  A++ +       +  R  
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517

Query: 549 ELYQSLMEERRKLESQARTAASL 571
           EL ++L E+  K +  AR A +L
Sbjct: 518 ELIENLQEKSIKAQEDARLAENL 540


>gi|229918290|ref|YP_002886936.1| MutS2 family protein [Exiguobacterium sp. AT1b]
 gi|229469719|gb|ACQ71491.1| MutS2 family protein [Exiguobacterium sp. AT1b]
          Length = 784

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 227/728 (31%), Positives = 341/728 (46%), Gaps = 104/728 (14%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQR 95
           L L  + D+   +  A  G +LS SE+ AV   +   R V N  +KL E    D + + R
Sbjct: 62  LPLGGLTDVRAEVKRAAIGSVLSTSELLAVAAVMYGGRQVKNFIEKLHE----DNEEI-R 116

Query: 96  YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LD 150
              L E       L E+E+ I   ID +   + D AS  L  +R +  R+ E      +D
Sbjct: 117 IPRLDEYADKLTKLIEVEQAIRHAIDDQG-TVQDSASPQLRGLRTQL-RSFEGSVRSRID 174

Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
           ++L+  A  +  A      ++T R  R  V +K  ++     GI  + S+SG T F+EP+
Sbjct: 175 NILRNNAKMLSDA------IVTIRNDRYVVPVKQEYRQAF-GGIVHDQSASGQTLFIEPQ 227

Query: 211 GAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
             V  NN   EVRL   E AE   ILS L+ E+      I   +D + E+D  FA+  + 
Sbjct: 228 AIVSINNEIQEVRLK--ERAEIERILSALSNEVGGVHDAIMTNLDVLAELDFIFAKVAYG 285

Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
           Q M    P L+       +  I ++  +HP +                P           
Sbjct: 286 QEMKATEPKLND------NREIKLKQARHPFI----------------P----------- 312

Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
                    D  VPI +++  +   +VITGPNTGGKT ++KT+GL  LM ++GLY+PA+ 
Sbjct: 313 --------KDEVVPITVELGEDYTSLVITGPNTGGKTVTLKTIGLLQLMVQSGLYVPAEF 364

Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
              L  FD + ADIGD QS+EQ+LSTFS H++ IV +L+ +   SLVL DE+G+GTDP E
Sbjct: 365 GTELSVFDAVYADIGDEQSIEQSLSTFSSHMTNIVGMLDKIDFMSLVLFDELGAGTDPQE 424

Query: 449 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
           G ALA +IL  ++ R      TTHY++L           NA+ EF +E+L PTYR+L G 
Sbjct: 425 GAALAIAILDEVKRRGARVAATTHYSELKAYAYNREGVMNASMEFDIESLSPTYRLLIGV 484

Query: 509 TGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEE 557
            G SNA  I++ +G   ++I +A           + ++  L   +Q  R  +L Q L+ +
Sbjct: 485 PGRSNAFEISRRLGLSEQVIDKARSHVGSDAESVESMINELEAAKQ--RAEQLEQELIVK 542

Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
           R   E +     +          E E E  +L R A     K  +Q       AK Q + 
Sbjct: 543 RHDFEEEQAEFEAKMT-------EFERERDNLYRAAEAKAEKAVEQ-------AKRQANE 588

Query: 618 VVQDFENQLRD---ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
           V+ D   +LR+       EI +  KE ESA   + E         V +      T   GE
Sbjct: 589 VI-DRLKKLREQGIVKEHEIIAAKKELESAKPTLQEKKIQ----KVKQKAHQKRTFSKGE 643

Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 734
           +V V +   K   V ++  +D+   VQ G M+V VK ++++ I  SK K+  +    L++
Sbjct: 644 EVKVTTFNQKGYIVKQI--NDNEYNVQVGIMKVNVKADDLQKIGPSKEKSLQSKGSSLKR 701

Query: 735 QVCTCTSL 742
           Q  T + L
Sbjct: 702 QSSTKSEL 709


>gi|160945171|ref|ZP_02092397.1| hypothetical protein FAEPRAM212_02690 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442902|gb|EDP19907.1| recombination and DNA strand exchange inhibitor protein
           [Faecalibacterium prausnitzii M21/2]
          Length = 804

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 221/736 (30%), Positives = 339/736 (46%), Gaps = 132/736 (17%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLE 101
           +E ++ +   AV G +LS  E+  V   LR   ++  W          G S     P  +
Sbjct: 68  VEGVSQLAARAVKGGVLSMGELLMVAGALRNFQHLSSWY---------GSSEHDAMPTDD 118

Query: 102 LLKNCNFLTELEEKIGFCI---DCKLLIILDRASEDL-EL---IRAERKRNMENLDSLLK 154
           L         LE++I   I   D     + D AS  L EL   IRA      + L+S+++
Sbjct: 119 LFYALAPEPGLEQQISSAILAPDA----MADTASRTLAELRKKIRATENSIRDRLESMVR 174

Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
            +    +    + + +++ R  R  V +K+ ++  +  GI  +VSS+GAT F+EP+  VE
Sbjct: 175 NMDTSKY----LQESVVSMRNGRYVVPVKSEYRGEV-SGIIHDVSSTGATVFVEPQAVVE 229

Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
            N   ++    E  E   IL   TA++A  E + +Y    +LEID+  A+A  A  +   
Sbjct: 230 ANARILQYRAQEAQEIERILVAFTAQVAAIEPQFQYSYKAMLEIDILLAKARLALELKAF 289

Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
            P       V  DSS N+   +HPL+               +P K               
Sbjct: 290 KPA------VRTDSSFNLIRARHPLI---------------DPQKC-------------- 314

Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
                 VP+DI +  E   ++ITGPNTGGKT ++KT GL   M++ G  +PA     +  
Sbjct: 315 ------VPVDIALGGEYDSLIITGPNTGGKTVTLKTAGLLCAMAQCGFLIPADERSEICV 368

Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
           FD  L DIGD QS+EQ+LSTFSGH+ +I  ILEL    +LVL+DE+G+GTDP+EG ALA 
Sbjct: 369 FDEFLVDIGDEQSIEQSLSTFSGHMKKITGILELAMPHTLVLLDELGAGTDPAEGAALAV 428

Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
           +I++ LR R  L + TTHYA+L     +     NA+ EF LETLRPTY++  G  G SNA
Sbjct: 429 AIIEELRRRGVLLMATTHYAELKVFALETKGVVNASCEFDLETLRPTYKLSVGVPGKSNA 488

Query: 515 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 574
             I++ +G   ++I+ AQ                   Q L  E ++L++       L  +
Sbjct: 489 FLISEKLGIPSRVIEAAQ-------------------QHLSAEDKRLDAVLGQLDDLKLQ 529

Query: 575 IMDLYREIEDEAKDLDRRAAH-LKAKE------TQQVQQELNFAKVQIDTVVQDFENQ-- 625
           +    +E ++E + L   A+H L+A         QQ + EL  A+ +  T+ Q  E Q  
Sbjct: 530 L----KESQNEVEQLRNEASHQLEAARKKRDELIQQGENELEAARAKARTLAQQVETQAY 585

Query: 626 -----LRDASADEINS-----------LIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
                LR    DE  S             KE+E   A     H P             F 
Sbjct: 586 ALTDELRQLQKDERMSAQQKAQRAREIAKKETEKLFAGTEVVHNP----------VKEFV 635

Query: 670 P----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
           P    + G++V +  L ++LATV+ +P  +  VLV+ G ++ +V    ++  P    K +
Sbjct: 636 PLKDVKVGQEVCIAEL-NQLATVLALPDKNGDVLVRAGIIKTKVPLKGLKQ-PEKLVKES 693

Query: 726 ANPAPRLRKQVCTCTS 741
             P  + +++    T 
Sbjct: 694 TAPKTKAQQRYSRLTG 709


>gi|206901081|ref|YP_002251021.1| MutS2 protein [Dictyoglomus thermophilum H-6-12]
 gi|206740184|gb|ACI19242.1| MutS2 protein [Dictyoglomus thermophilum H-6-12]
          Length = 778

 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 195/687 (28%), Positives = 351/687 (51%), Gaps = 87/687 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
            S I+++   ++ A  G ++ P E   + RT+     +W KL +  E     +++ +P  
Sbjct: 64  FSGIKNLEIYIDKAEKGGIVYPDEFEEIVRTI----EIWSKLRDYQE----KVRKIAP-- 113

Query: 101 ELLKNC-NFLTELEEKIGFCI-DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
            L +N  + L +L  +I  CI D +   ++D AS +L+ IR +++R  + +   L+ +  
Sbjct: 114 NLWRNTLHNLHDLYIQIRRCIQDGE---VVDSASPELKQIRQKKERLNQKIKETLENIIQ 170

Query: 159 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
           + +++   D+ +IT R  R  V I+   +  +  GI  + S+SG T ++EP+  VE NN 
Sbjct: 171 KEWRSYLQDQ-IITIRHGRYVVPIRQEFRGKI-QGIVHDQSTSGLTVYVEPQVIVELNNQ 228

Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
              L + E  E   IL+ LT+ +   + EI   +    E+D  +A+  +A+    + PIL
Sbjct: 229 IALLESEEKREIERILTRLTSILLSYKEEILENLRTSFELDFVYAKIKWAEKHKAITPIL 288

Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
             +  +     I +   +HP L                                     +
Sbjct: 289 EKEKPL-----IILREARHPFL------------------------------------GE 307

Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
             VPI ++V      +VITGPNTGGKT ++KT+GL  L+++AG+ +PAK    L  F+ +
Sbjct: 308 KAVPISLEVGRTFNTLVITGPNTGGKTVTLKTIGLFVLLNQAGIPVPAKEGTVLGIFNQV 367

Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRES----LVLIDEIGSGTDPSEGVALAT 454
            ADIGD QS+EQNLSTFS H++ I+  ++ + R      L+LIDE+G+GTDP EG ALA 
Sbjct: 368 FADIGDEQSIEQNLSTFSSHMTNIISFIDYLERTGDKRVLILIDELGAGTDPQEGAALAV 427

Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
           ++L+Y  ++  + V+ TH+  L  +  K    ENA+ EF   +L+P Y+++ G  G SNA
Sbjct: 428 ALLEYFHEKGTINVIATHFPQLKVIASKYPGMENASMEFDEISLKPLYKVVMGIPGKSNA 487

Query: 515 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 574
           + I+K +G  RKI+ R+  L+        + +  E+   L  +RR+ E +      L  +
Sbjct: 488 ILISKRLGLPRKILDRSLSLL-----SEDEIKLEEVIGELQRDRRRYEEEIEKINKLKRD 542

Query: 575 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ---LRDASA 631
           + +  R+I++E + L++  A LKAK  +++ ++++  + +I  +++  + +   ++DA +
Sbjct: 543 LQEEKRKIQEEKEMLEKEKAQLKAKYKEELFRDISKVEGKIREIIRKLQEESLTMKDAQS 602

Query: 632 --DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
             +E+ +L KE       I E   P++          ++ P  G++V ++S   K   V+
Sbjct: 603 LQEELRNLRKE-----LTIEEKREPEN---------LTYIPHIGDRVLLRS-TKKEGYVI 647

Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRP 716
           +V  +  T LVQ G +++ V    + P
Sbjct: 648 DVDNEKKTALVQVGLLKINVPWAELAP 674


>gi|323142314|ref|ZP_08077146.1| MutS2 family protein [Phascolarctobacterium succinatutens YIT
           12067]
 gi|322413198|gb|EFY04085.1| MutS2 family protein [Phascolarctobacterium succinatutens YIT
           12067]
          Length = 793

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 211/704 (29%), Positives = 337/704 (47%), Gaps = 86/704 (12%)

Query: 21  QKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           ++L  +T+ AL ++ + +        +I   +  A  G +L P E+  ++ T++A  ++ 
Sbjct: 44  KRLQEETAEALRILDEGRRFPFGGAFNITADVKRAELGSVLEPEELQHIQTTVQAFASMK 103

Query: 80  KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
                  +   ++++    L E        + LE++IG  ID +   I D AS  L  +R
Sbjct: 104 -------DFTAENVETAPNLAEYGAELTQFSRLEKQIGSAID-EYGEIKDNASPKLGGLR 155

Query: 140 AE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
           A     + R  E LDS+L     Q +    I    +T R  R  + +K  +K   P GI 
Sbjct: 156 AAIQIAKNRVKEKLDSILHDPNNQKYFMDNI----VTMRGDRYVIPVKQEYKMNFP-GIV 210

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
            + S +GAT F+EP   V  NN   R    E  E   IL  LT  +    + +   ++  
Sbjct: 211 HDQSGTGATLFIEPLAVVNLNNDIKRYVAEEHEEMERILRQLTQNVGAEAKALLASLEIF 270

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
             +D+  ARA  AQ    V P+L           + I   +HPLL               
Sbjct: 271 TTLDVICARALLAQEQHAVRPMLV------LSGGVEIAQGRHPLL--------------- 309

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
            P                    D  VP+++++  +  +++ITGPNTGGKT ++K +GL +
Sbjct: 310 -P-------------------KDTVVPLNVQLGDKFTMLLITGPNTGGKTVALKAVGLFA 349

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM++ GL++PA +  ++P F  + ADIGD QS+EQ+LSTFS H++ ++ IL  V    LV
Sbjct: 350 LMAQIGLFIPASS-AKMPVFRAVYADIGDEQSIEQSLSTFSAHMTNLIRILNEVKAGDLV 408

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           LIDEI +GTDP+EG ALA ++L++L ++  L +VTTHY++L          ENA+ EF  
Sbjct: 409 LIDEICAGTDPNEGAALAMAMLEHLHEQGVLTMVTTHYSELKTFAYGHEGMENASVEFDP 468

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSL 554
            +LRPTYR+L G  G SNA NI++ +G    II+ A +L+       Q+H   E + Q L
Sbjct: 469 VSLRPTYRLLMGVPGSSNAFNISRRLGLAEDIIKNAGELL------NQEHVHMENVLQEL 522

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
             ERR+ ES ++    L  E   L   +     + +RR   +  K  +Q  +    ++ +
Sbjct: 523 DSERRRYESGSKEIEDLRRESEQLRNALAYSKSEFERRKNEMLRKAREQADEIYRRSRRE 582

Query: 615 IDTVVQ-------DFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
            + V++       DF+ +  + +A+E    + ++ S  A + E               S+
Sbjct: 583 SEAVLKELRSMKADFDTKRLEQAAEEARKKLNKTLSEDAPLPEG-----------APLSA 631

Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
            T + G  V V SLG K   + +V G+D TV V   KM V  KK
Sbjct: 632 KTAKKGLNVFVVSLG-KNGIITDVNGNDVTVQVGILKMTVPAKK 674


>gi|347530511|ref|YP_004837274.1| DNA mismatch repair protein [Roseburia hominis A2-183]
 gi|345500659|gb|AEN95342.1| DNA mismatch repair protein [Roseburia hominis A2-183]
          Length = 795

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 220/702 (31%), Positives = 329/702 (46%), Gaps = 68/702 (9%)

Query: 21  QKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           ++L  QTS AL+ + +   L  S + DI   L     G  LS  E+  V   L +     
Sbjct: 44  EQLQQQTSDALSRLFKYGSLSFSGVTDIRDSLKRLEIGGALSAIELLRVCSLLESA---- 99

Query: 80  KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
           K+    A    D+ Q    L  L      LT L ++I  CI  +  I  D AS  L  IR
Sbjct: 100 KRAKAFARSQDDNDQPDDSLTSLFAGIEPLTPLCDEIRRCILSEDEIA-DDASSTLHSIR 158

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
              +   + + + +  +         +   +IT R  R C+ +KA  K L+P G+  + S
Sbjct: 159 RSMRGMNDKIRAQMNSMINNTTTRSYLQDTVITMRDGRYCLPVKAEAKSLVP-GMIHDQS 217

Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
           S+G+T F+EP   V  NN    L   E  E   IL+ L+   A    ++    + + E+D
Sbjct: 218 STGSTLFIEPMAVVNLNNEYKELQLREQEEIEVILAGLSNLTASYATQLLADYELLTELD 277

Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
             FARA FAQ  +GV P+ +       D  I+I   +HPLL               +P K
Sbjct: 278 FIFARAAFAQTYNGVAPLFND------DGRIHIRKGRHPLL---------------DPKK 316

Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
                                VPID+++  + R++++TGPNTGGKT S+KT+GL +LM +
Sbjct: 317 V--------------------VPIDVRLGEDFRLLIVTGPNTGGKTVSLKTVGLLTLMGQ 356

Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
           +GL++PA     L  FD + ADIGD QS+EQ+LSTFS H+  I+ ILE V+  SLVL DE
Sbjct: 357 SGLHIPASERSELGIFDEVFADIGDEQSIEQSLSTFSSHMVNIIRILEQVNDRSLVLFDE 416

Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
           + +GTDP+EG ALA SIL  L       + TTHY++L          ENA  EF + TL 
Sbjct: 417 LCAGTDPTEGAALAISILSKLHLYGARIMATTHYSELKVYALSTPGVENACCEFDVATLS 476

Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 559
           PTYR+L G  G SNA  I++ +G    +I  A+      R  + +    +L   L + R 
Sbjct: 477 PTYRLLIGIPGKSNAFAISEKLGLPSDLITDAKG-----RISKSEGDFEDLIADLEKSRS 531

Query: 560 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 619
            +E +        AEI  L  ++E + + LD     +  +  +Q    L  AK   D  +
Sbjct: 532 TIEREQLEINQYKAEIESLKEKLEQKQERLDSSRNKILREANEQAYNILKEAKDVADETI 591

Query: 620 QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF----TPQ---F 672
           ++F N+   A A  ++ + KE       + +A +      +SE   +S      P+    
Sbjct: 592 RNF-NKYGKAGA-PVSEMEKERTKLRGKMDKAAQ-----KMSEQKKASVPNHNVPKKLRI 644

Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
           G+ V V S+  K  TV  +P     + VQ G +R  V  N++
Sbjct: 645 GDSVKVISMNLK-GTVHSLPNARGDLYVQMGILRSLVNINDL 685


>gi|339007645|ref|ZP_08640219.1| protein MutS2 [Brevibacillus laterosporus LMG 15441]
 gi|338774848|gb|EGP34377.1| protein MutS2 [Brevibacillus laterosporus LMG 15441]
          Length = 785

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 209/718 (29%), Positives = 351/718 (48%), Gaps = 75/718 (10%)

Query: 12  PFGK--SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
           PF    ++  +Q+   + S  L +  S PL    I +I G +  A    +L+P E+  + 
Sbjct: 36  PFNHIDAVRHAQRQTEEASTVLRVKGSVPL--GGIRNIRGPIQRARLNSILAPLELLDIA 93

Query: 70  RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
            TL A   + + +T+ +E         S L  L+     L +LE +I  CID    ++ D
Sbjct: 94  TTLHAGRRLKQFITDISEE-----HELSILQSLVDRIEGLRDLETEIKRCIDDNGEVV-D 147

Query: 130 RASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
            AS +L  IR E +    R  E LD + +  + Q      + + ++T R  R  + +K  
Sbjct: 148 SASLELRQIRQEIRSSEARIREKLDQMTRSSSTQKM----LMENIVTIRGDRFVIPVKQE 203

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM--EVRLSNSEIAEETAILSLLTAEIAK 243
           ++     GI  + S+SGAT F+EP+  V  NN   E RL      E   IL  LT  +A 
Sbjct: 204 YRSHF-GGIVHDQSASGATLFIEPEVIVSMNNKLREARLKEEHEVER--ILYTLTVLVAD 260

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
               +   +  + E+D  FA+A  A  M  + P L+ + ++           +HPL+   
Sbjct: 261 HVEMLLENLSVLAELDFIFAKAQLAYSMKAISPKLNEEGYILLKKG------RHPLI--- 311

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                       +P                       VP+D+++      +V+TGPNTGG
Sbjct: 312 ------------DP--------------------KVVVPLDVELGKGYTGIVVTGPNTGG 339

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT S+KTLGL SLM+ AGL++PA+    +  F  I ADIGD QS+EQ+LSTFS H++ I+
Sbjct: 340 KTVSIKTLGLLSLMTMAGLHIPAQEETEMAVFSSIFADIGDEQSIEQSLSTFSSHLTNII 399

Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
            IL+ +  +SLVL DE+G+GTDP+EG ALA SIL ++  +    V TTHY++L       
Sbjct: 400 RILDQMDEKSLVLFDELGAGTDPTEGAALAMSILDHVLAKGARLVATTHYSELKAYAYDT 459

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
               NA+ EF ++TLRPTYR+L G  G SNA  IA  +G + +II +A++ V      ++
Sbjct: 460 PEVVNASVEFDVQTLRPTYRLLVGVPGRSNAFAIASRLGLNEQIIDKARRSV-----SKE 514

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
           +++  ++  SL   ++  E +   A ++  +  +L +++E+E +        L  K  ++
Sbjct: 515 ENQVEKMIASLESNKKTAEKEREDAENIRKQAEELRQQLEEERRHFAEAKNRLLEKAEEE 574

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASAD-EINSLIKESESAIAAIVEAHRPDDDFSVSE 662
            +  +  A  + + ++++   Q+R    D + + LI   +    A++E  +         
Sbjct: 575 ARVAVQLASEEAEVIIREL-RQMRKEGVDFKEHRLIDAKKRLGNAVLELEKEKVKKPAKA 633

Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
              +    + G++V V S G K   + +V   +   LVQ G ++++VKK+++  +  S
Sbjct: 634 VRATQI--KIGDEVMVDSFGQKGTVLDKVSSTE--YLVQLGIIKMKVKKDDMHVVKES 687


>gi|312109983|ref|YP_003988299.1| MutS2 family protein [Geobacillus sp. Y4.1MC1]
 gi|311215084|gb|ADP73688.1| MutS2 family protein [Geobacillus sp. Y4.1MC1]
          Length = 784

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 212/715 (29%), Positives = 344/715 (48%), Gaps = 85/715 (11%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           Q+  ++ +AAL +    PL    I DI   L  A  G  LSP E+  +  T+ A     +
Sbjct: 47  QEETDEAAAALRLRGHVPL--GGIVDIRASLKRAKIGGTLSPHELLDIASTISAS----R 100

Query: 81  KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
           +L +  E   +  + +  L    +    L E+++ I  CID    + LD ASE L  IR 
Sbjct: 101 QLKQFIESLHEEKEEFPHLAGYAEKLVALPEVQQAIERCIDDHGEV-LDHASERLRSIRQ 159

Query: 141 ERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
           + +    R  E L+S+++  +AQ      +   +IT R  R  + +K  ++     GI  
Sbjct: 160 QLRTTEARVREKLESIIRSPSAQKM----LSDAIITIRNDRYVIPVKQEYRGAY-GGIVH 214

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP+  VE NN        E  E   IL+ LT  +A     +   +  + 
Sbjct: 215 DQSASGATLFIEPQAVVELNNQLQEARVKEKREIERILTELTGIVAGHAEALLENVGILA 274

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           ++D  FA+A +A  +    P L+ + ++    +      +HPL+   ++           
Sbjct: 275 QLDFIFAKAKYANKLKATKPALNDRGYIRLLQA------RHPLIDQEAV----------- 317

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                                   VP DI++  E   +VITGPNTGGKT ++KT+GL +L
Sbjct: 318 ------------------------VPNDIELGKEYTTIVITGPNTGGKTVTLKTIGLLTL 353

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++AGL++PA +   L  F  I ADIGD QS+EQ+LSTFS H+  IV+IL  V  ESLVL
Sbjct: 354 MAQAGLFIPALDGSELAVFRSIYADIGDEQSIEQSLSTFSSHMVNIVEILRDVDHESLVL 413

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA +IL  +  R    V TTHY +L           NA+ EF  E
Sbjct: 414 FDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRDGVINASVEFDTE 473

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TLRPTY++L G  G SNA  I+K +G   +II+RA     +L    + +    +  SL +
Sbjct: 474 TLRPTYKLLIGIPGRSNAFEISKRLGLAERIIERA-----KLHISAESNNVENMIASLEQ 528

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
            +++ E + + A     E   L R+ E + ++L  +   +  +  ++    +  ++ + +
Sbjct: 529 SKKRAEEELKKAEEARMEAEQLRRDWEQKWEELHEKREEIIEEAKRKAADIVRSSQQKAE 588

Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD---------FSVSETNTSS 667
            ++ +     ++  A+     IKE E     ++EA +   +             +  T S
Sbjct: 589 RIIHELRRMQQEKQAE-----IKEHE-----LIEAKKRLQEAMPTLEKKKKERKKQATHS 638

Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           F P  G++V V SL  K   V +V   DD   VQ G +++++ + ++  I ++ +
Sbjct: 639 FQP--GDEVKVISLNQKGYLVEKV--SDDEWQVQLGILKMKINERDLEYIGSAPK 689


>gi|419768706|ref|ZP_14294822.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-250]
 gi|383359532|gb|EID36955.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-250]
          Length = 694

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 206/681 (30%), Positives = 338/681 (49%), Gaps = 81/681 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+  E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  +  +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P    +  +   ++       HPLL   ++       +N+     DVE            
Sbjct: 295 PTFKEERTIYLPNAF------HPLLDKDTV------VANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
           +I+K +G    II +A+ ++     E     +S  + S  + ++R +L+   R A   H 
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
            +   Y++ ++  K L   A   K K  Q+V+     A  + D ++++  N LRD    E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE 605

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
               +KE E     I +  + DD +            ++     G++V V S G K   V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656

Query: 689 VEVPGDDDTVLVQYGKMRVRV 709
           +E+ G+++ V VQ G +++++
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL 676


>gi|393199976|ref|YP_006461818.1| mismatch repair ATPase [Solibacillus silvestris StLB046]
 gi|327439307|dbj|BAK15672.1| mismatch repair ATPase [Solibacillus silvestris StLB046]
          Length = 788

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 211/730 (28%), Positives = 350/730 (47%), Gaps = 94/730 (12%)

Query: 22  KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           +LL +    LA+++ +  + L  I D+      +  G +LSP E+  +  T+RA + + +
Sbjct: 46  ELLEEMDEGLAILRVKGNVPLGGIFDVRPHARRSQIGGMLSPMELMEIASTIRA-SRILR 104

Query: 81  KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR- 139
              E  +++ ++       +E  +    LT L+ +I  CID     +LD AS  L  IR 
Sbjct: 105 NFIE--DIESENTIEIPHFIERKEQMPVLTALQHEINDCIDDNG-TVLDSASPALRSIRQ 161

Query: 140 ---AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
              +E  +  + L+SL +   A    +  I    IT R  R  + +K  ++     GI  
Sbjct: 162 SLRSEESKVRQKLESLTRGANATKMLSDAI----ITIRNDRFVIPVKQEYRSHY-GGIVH 216

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SG T F+EP   ++ NN   RL   E AE   ILS LT  + +   EI  L+  + 
Sbjct: 217 DQSASGQTLFIEPDAVIQSNNEVQRLKVKEKAEIERILSELTLRVQEVGHEIFVLVQLLG 276

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           E+D+  A+  + Q      P ++ + +     +      +HPLL                
Sbjct: 277 EMDVILAKGKYGQANKCTMPKMNKEGYTRLVRA------RHPLL---------------- 314

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
           P++  V N+                   I+   +   +VITGPNTGGKT ++KT+GL ++
Sbjct: 315 PIEDAVANT-------------------IEFGRDVTAIVITGPNTGGKTVTLKTVGLCTI 355

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++ GL +PA +   L  F+ I ADIGD QS+EQ+LSTFS H+  IVDIL   + +SL+L
Sbjct: 356 MAQCGLPVPALDGSELAVFEQIFADIGDEQSIEQSLSTFSSHMVNIVDILSKFNEKSLIL 415

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA +IL    DR    + T+HY +L           NA+ EF +E
Sbjct: 416 FDELGAGTDPQEGAALAIAILDETVDRGARVMATSHYPELKAYGYNRPSVVNASVEFDIE 475

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TL PTYR+L G  G SNA  I+K +G    +I  A+      R     H    +  SL E
Sbjct: 476 TLSPTYRLLIGVPGRSNAFEISKRLGLSSNVIDHAKSFTGTDR-----HEVESMIASLEE 530

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
            R + E +A  A  L  +   +  E+E+  +  D +  +L+ K   + ++ ++ AK + +
Sbjct: 531 SRLRSEREADEAHLLLEDAQKIRAELEERLRIYDEKKENLEKKAKDKARKIVDDAKKEAE 590

Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR------PDDDFSVSETNTSSF-- 668
           T++ +      +A+       +KE E     +++A +      P D+  V +   ++   
Sbjct: 591 TIIAELRKMKENAALS-----VKEHE-----LIDAKKRLDNAAPIDNNKVLQKAVAARER 640

Query: 669 --TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV-----------KKNNIR 715
               Q G++V V S G K  T+++  G++   +VQ G +++++           K+   R
Sbjct: 641 KQNLQVGDEVKVLSYGQK-GTLLQKAGNE--WVVQIGILKMKLPESDLEYVKPEKEQATR 697

Query: 716 PIPNSKRKNA 725
           P+ N K +N+
Sbjct: 698 PMMNVKNRNS 707


>gi|27467755|ref|NP_764392.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis ATCC 12228]
 gi|293366874|ref|ZP_06613550.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|417656654|ref|ZP_12306337.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU028]
 gi|417660105|ref|ZP_12309696.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU045]
 gi|417909781|ref|ZP_12553514.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU037]
 gi|418603410|ref|ZP_13166795.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU041]
 gi|418606840|ref|ZP_13170105.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU057]
 gi|418609778|ref|ZP_13172912.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU065]
 gi|418628985|ref|ZP_13191501.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU127]
 gi|418663768|ref|ZP_13225276.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU081]
 gi|419772619|ref|ZP_14298650.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-K]
 gi|420202124|ref|ZP_14707719.1| MutS2 family protein [Staphylococcus epidermidis NIHLM018]
 gi|420206519|ref|ZP_14712029.1| MutS2 family protein [Staphylococcus epidermidis NIHLM008]
 gi|420210956|ref|ZP_14716345.1| MutS2 family protein [Staphylococcus epidermidis NIHLM001]
 gi|420219527|ref|ZP_14724543.1| MutS2 family protein [Staphylococcus epidermidis NIH04008]
 gi|420222048|ref|ZP_14726973.1| MutS2 family protein [Staphylococcus epidermidis NIH08001]
 gi|420224910|ref|ZP_14729748.1| MutS2 family protein [Staphylococcus epidermidis NIH06004]
 gi|420229273|ref|ZP_14733979.1| MutS2 family protein [Staphylococcus epidermidis NIH04003]
 gi|420231637|ref|ZP_14736282.1| MutS2 family protein [Staphylococcus epidermidis NIH051668]
 gi|38604826|sp|Q8CPL6.1|MUTS2_STAES RecName: Full=MutS2 protein
 gi|27315299|gb|AAO04434.1|AE016746_224 MutS-like protein [Staphylococcus epidermidis ATCC 12228]
 gi|291319175|gb|EFE59545.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329734429|gb|EGG70742.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU045]
 gi|329736315|gb|EGG72587.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU028]
 gi|341652390|gb|EGS76178.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU037]
 gi|374406114|gb|EHQ77017.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU065]
 gi|374406846|gb|EHQ77724.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU057]
 gi|374407579|gb|EHQ78432.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU041]
 gi|374411187|gb|EHQ81905.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU081]
 gi|374834979|gb|EHR98610.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU127]
 gi|383359246|gb|EID36676.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus IS-K]
 gi|394270097|gb|EJE14620.1| MutS2 family protein [Staphylococcus epidermidis NIHLM018]
 gi|394278358|gb|EJE22675.1| MutS2 family protein [Staphylococcus epidermidis NIHLM008]
 gi|394282893|gb|EJE27075.1| MutS2 family protein [Staphylococcus epidermidis NIHLM001]
 gi|394288952|gb|EJE32849.1| MutS2 family protein [Staphylococcus epidermidis NIH04008]
 gi|394290079|gb|EJE33949.1| MutS2 family protein [Staphylococcus epidermidis NIH08001]
 gi|394294313|gb|EJE37999.1| MutS2 family protein [Staphylococcus epidermidis NIH06004]
 gi|394299039|gb|EJE42590.1| MutS2 family protein [Staphylococcus epidermidis NIH04003]
 gi|394302179|gb|EJE45627.1| MutS2 family protein [Staphylococcus epidermidis NIH051668]
          Length = 782

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 206/681 (30%), Positives = 336/681 (49%), Gaps = 81/681 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+  E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  +  +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P    +  +   ++       HPLL            +N+     DVE            
Sbjct: 295 PTFKEERTIYLPNAF------HPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
           +I+K +G    II +A+ ++     E     +S  + S  + ++R +L+   R A   H 
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
            +   Y++ ++  K L   A   K K  Q+V+     A  + D ++++  N LRD    E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE 605

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
               +KE E     I +  + DD +            ++     G++V V S G K   V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656

Query: 689 VEVPGDDDTVLVQYGKMRVRV 709
           +E+ G+++ V VQ G +++++
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL 676


>gi|421871064|ref|ZP_16302686.1| mutS2 family protein [Brevibacillus laterosporus GI-9]
 gi|372459691|emb|CCF12235.1| mutS2 family protein [Brevibacillus laterosporus GI-9]
          Length = 785

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 213/732 (29%), Positives = 353/732 (48%), Gaps = 103/732 (14%)

Query: 12  PFGK--SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
           PF    ++  +Q+   + S  L +  S PL    I +I G +  A    +L+P E+  + 
Sbjct: 36  PFNHIDAVRHAQRQTEEASTVLRVKGSVPL--GGIRNIRGPIQRARLNSILAPLELLDIA 93

Query: 70  RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
            TL A   + + +T+ +E         S L  L+     L +LE +I  CID    ++ D
Sbjct: 94  TTLHAGRRLKQFITDISEE-----HELSILQSLVDRIEGLRDLETEIKRCIDDNGEVV-D 147

Query: 130 RASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
            AS +L  IR E +    R  E LD + +  + Q      + + ++T R  R  + +K  
Sbjct: 148 SASLELRQIRQEIRSSEARIREKLDQMTRSSSTQKM----LMENIVTIRGDRFVIPVKQE 203

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM--EVRLSNSEIAEETAILSLLTAEIAK 243
           ++     GI  + S+SGAT F+EP+  V  NN   E RL      E   IL  LT  +A 
Sbjct: 204 YRSHF-GGIVHDQSASGATLFIEPEVIVSMNNKLREARLKEEHEVER--ILYTLTVLVAD 260

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
               +   +  + E+D  FA+A  A  M  + P L+ + ++           +HPL+   
Sbjct: 261 HVEMLLENLSVLAELDFIFAKAQLAYSMKAISPKLNEEGYILLKKG------RHPLI--- 311

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                       +P                       VP+D+++      +V+TGPNTGG
Sbjct: 312 ------------DP--------------------KVVVPLDVELGKGYTGIVVTGPNTGG 339

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT S+KTLGL SLM+ AGL++PA+    +  F  I ADIGD QS+EQ+LSTFS H++ I+
Sbjct: 340 KTVSIKTLGLLSLMTMAGLHIPAQEETEMAVFSSIFADIGDEQSIEQSLSTFSSHLTNII 399

Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
            IL+ +  +SLVL DE+G+GTDP+EG ALA SIL ++  +    V TTHY++L       
Sbjct: 400 RILDQMDEKSLVLFDELGAGTDPTEGAALAMSILDHVLAKGARLVATTHYSELKAYAYDT 459

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
               NA+ EF ++TLRPTYR+L G  G SNA  IA  +G + +II +A++ V      ++
Sbjct: 460 PEVVNASVEFDVQTLRPTYRLLVGVPGRSNAFAIASRLGLNEQIIDKARRSV-----SKE 514

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAE--------------IMDLYREIEDEAKDL 589
           +++  ++  SL   ++  E +   A ++  +                +    + ++A++ 
Sbjct: 515 ENQVEKMIASLESNKKTAEKEREDAENIRKQAEELRQQLEEERRQFAEAKNRLLEKAEEE 574

Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIAAI 648
            R A  L ++E + + +EL     Q+     DF E++L DA     N++++  +  +   
Sbjct: 575 ARVAVQLASEEAEVIIRELR----QMRKEGVDFKEHRLIDAKKRLGNAVLELEKEKVKKP 630

Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
            +A R             +   + G++V V S G K   + +V   +   LVQ G ++++
Sbjct: 631 AKAVR-------------ATQIKIGDEVMVDSFGQKGTVLDKVSSTE--YLVQLGIIKMK 675

Query: 709 VKKNNIRPIPNS 720
           VKK+++  +  S
Sbjct: 676 VKKDDMHVVKES 687


>gi|78778605|ref|YP_396717.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9312]
 gi|78712104|gb|ABB49281.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9312]
          Length = 803

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 229/747 (30%), Positives = 360/747 (48%), Gaps = 104/747 (13%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
           MG   +   +IP     E +++LLN+T     +  +  + +  S + DI+  +     G 
Sbjct: 41  MGKRAILSFKIP--SEYEVAKRLLNETVEITELENNLEKSISFSGVCDISRNIEICSKGG 98

Query: 59  LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
           ++  SE+  +  T+ A  N+ K L     LD +     S   + L+ + N  T L  K G
Sbjct: 99  VILSSELLEIAITISAARNLKKIL-----LDFEKRPFISSFTKNLIDHHNIETIL--KNG 151

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
              + +   I D AS  L ++R E          L KK+  +I     I K L       
Sbjct: 152 IESNGR---ISDDASSKLSILRKEL---------LSKKLERKILVDKFIQKNLAYLQDTI 199

Query: 171 ITKRRSRMCVGIKASH--KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           I  R  R  + +K ++  K+    GI  + SSSG T + EP   V   N    L     A
Sbjct: 200 IGDRYGRPVLAVKVNYIDKF---KGIIHDSSSSGNTVYFEPDSVVTKGNKIASLEARIAA 256

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           EE  +L   +  I+ +   +  +   +L ++ A  R+ +++W+ G  PI      +S   
Sbjct: 257 EEFKLLQKWSQVISDNSENLIAMASILLRLENALTRSRYSKWIGGKTPIFEENPIIS--- 313

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
              + G  HPLL+                     EN +       KG S  PV +D ++ 
Sbjct: 314 ---LIGFSHPLLIW--------------------ENKK-------KG-SPPPVAVDFQIN 342

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
              +VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+   I  DIGD+QSL
Sbjct: 343 RNIKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSL 402

Query: 409 EQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
           E+NLSTFSGHISRI +ILE +      S+VL+DEIGSGTDP EG ALA ++L+   ++  
Sbjct: 403 EENLSTFSGHISRIKEILESLDNRRGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSD 462

Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
           + + TTHY D+  LK  D+RFEN +  F  ++L+P Y + WG  G SNAL+I+K IG + 
Sbjct: 463 ITLATTHYGDIKALKYNDSRFENVSVAFDEDSLKPKYILNWGIPGRSNALSISKRIGLNE 522

Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
            I+  A      L+P+   +  S + + L EER K ++ A  AA L A    L+ E++  
Sbjct: 523 SILNEAANY---LKPKEVDNINS-IIKGLEEERIKQQNSAEAAAELIARTEILHDELKRN 578

Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLIKE 640
            +     A  ++  E  ++ +++  AK +    V D   +LRD + +      I   +KE
Sbjct: 579 YEYQKINAEKIQEIERYKLSKKIISAKKE----VIDLIRKLRDQNVNGEDTRIIGKRLKE 634

Query: 641 SESAIAAIVEAHRPDDDFSVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
            E+            +  +  + + S S+ P+ G+ V +KSL +    +V++        
Sbjct: 635 IET------------EHLTQKKVDKSISWNPKVGDFVKIKSL-NSTGQIVDLDKKGGFYE 681

Query: 700 VQYGKMRVRVKKNNIRPI----PNSKR 722
           V+ G  R  +  N+   I    PN KR
Sbjct: 682 VKCGSFRSILSVNDFEGINGEKPNFKR 708


>gi|304317232|ref|YP_003852377.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302778734|gb|ADL69293.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 786

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 207/709 (29%), Positives = 347/709 (48%), Gaps = 76/709 (10%)

Query: 16  SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           +L+++ K +++ + A++ + S        + I  ILN A     L+  ++  + R L   
Sbjct: 39  NLDKAAKEIDKVNEAVSFISSYGNMSFAFKKIDDILNKAKIKSTLNIGQLMTISRFLSLA 98

Query: 76  NNVWKKL-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             V   L +E  E +   L+ Y+  L  L+      +L E+I      +++I  D  S+D
Sbjct: 99  GRVKSYLRSEKEESNYPLLREYNIRLTNLR------DLYERID-----RIVISEDELSDD 147

Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPD 192
                 + +R   ++++ +K     I  +    +  P+IT R  R  V +K  ++ +   
Sbjct: 148 ASPALKDIRRQKAHINNKIKDTLNSIIASSSKELQDPIITIRNGRYVVPVKQEYRGMFK- 206

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           G+  + SSSGAT F+EP   VE NN   +L   E  E   ILS LT +I++   EI   M
Sbjct: 207 GLIHDQSSSGATLFIEPMTVVELNNDLRQLEIKEQQEIEKILSELTDDISQHISEIHENM 266

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
             + E+D+ FA+A ++   +   P+ ++  +      IN++  +HPLL            
Sbjct: 267 IALTELDVIFAKAKYSINTNSSKPVFNTHGY------INLKNARHPLL------------ 308

Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
               P                    D  VPI + +      +VITGPNTGGKT ++KT+G
Sbjct: 309 ----P-------------------KDAVVPISVYLGDSFDTLVITGPNTGGKTVTLKTVG 345

Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
           L +LM+ +GL +P      + +FD I  DIGD QS+EQ+LSTFS H++ IV IL  V+  
Sbjct: 346 LLTLMAMSGLNIPTDEGSSVAFFDNIFVDIGDEQSIEQSLSTFSAHMTNIVTILNSVTSN 405

Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
           SLVL+DE+G+GTDP+EG ALA SIL +L       + TTHY++L     K+   ENA+ E
Sbjct: 406 SLVLLDELGAGTDPTEGAALAMSILDFLHRINCRTIATTHYSELKQYALKNDGVENASVE 465

Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSEL 550
           F +ETLRPTYR+  G  G SNA  I++ +G + +II  A+  +  E L+ E       ++
Sbjct: 466 FDVETLRPTYRLTIGIPGKSNAFEISRRLGLNEEIIDNARNYITNEELKFE-------DI 518

Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
            + L ++R + E        L  ++  +  E E + +  +     +  K  ++ ++ L  
Sbjct: 519 IKDLEDKRIEAEKAKEEIEDLKRQVNSVKEEYERKRRQTEAERDRIIEKAREKARKILEN 578

Query: 611 AKVQIDTVVQDFENQLRDA-SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
            K   D ++     +LR+A  +D+ N LI+E+   +   +     ++    SE       
Sbjct: 579 TKSTADEIIA----KLREAEKSDKKNKLIEEARKKLKENISEM--EESLKKSEVPVYKKI 632

Query: 670 PQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           P+    G+  ++  L D+  T +  P  D  V +Q G +++ V  +N+R
Sbjct: 633 PKKVMPGQTFYIVPL-DQTGTALSEPDKDGNVKIQAGILKMNVHISNLR 680


>gi|418411583|ref|ZP_12984850.1| MutS2 protein [Staphylococcus epidermidis BVS058A4]
 gi|420167521|ref|ZP_14674174.1| MutS2 family protein [Staphylococcus epidermidis NIHLM087]
 gi|394238147|gb|EJD83630.1| MutS2 family protein [Staphylococcus epidermidis NIHLM087]
 gi|410892309|gb|EKS40103.1| MutS2 protein [Staphylococcus epidermidis BVS058A4]
          Length = 782

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 206/680 (30%), Positives = 332/680 (48%), Gaps = 79/680 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+  E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N   RL N E  E   IL+ LT  ++     +      + +ID   A+A +A+ + G  P
Sbjct: 236 NQISRLRNDEAVERERILTELTGLVSADSDALLVAESVMGQIDFLIAKARYARTIKGTKP 295

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
                     D +I +    HPLL            +N+     DVE             
Sbjct: 296 TFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------- 330

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
                            V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F+
Sbjct: 331 ----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFE 374

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA SI
Sbjct: 375 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSI 434

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L Y+R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA +
Sbjct: 435 LDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFD 494

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHAE 574
           I+K +G    II +A+ ++     E     +S  + S  + ++R +L+   R A   H  
Sbjct: 495 ISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHDA 554

Query: 575 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
           +   Y++ ++  K L   A   K K  Q+V+     A  + D ++++  N LRD    E 
Sbjct: 555 LSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE- 605

Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVV 689
              +KE E     I +  + DD +            ++     G++V V S G K   V+
Sbjct: 606 ---VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEVL 657

Query: 690 EVPGDDDTVLVQYGKMRVRV 709
           E+ G+++ V VQ G +++++
Sbjct: 658 ELVGNEEAV-VQMGIIKMKL 676


>gi|297796263|ref|XP_002866016.1| DNA mismatch repair muts family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311851|gb|EFH42275.1| DNA mismatch repair muts family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 796

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 238/786 (30%), Positives = 372/786 (47%), Gaps = 134/786 (17%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIED--IAGILNSAVS 56
           +G    +K      +S  ES KLL++T AA+ M++  S  LDLS+I    +   +  A  
Sbjct: 71  LGREATKKKLWSLDQSFSESLKLLDETDAAIKMLEHGSFCLDLSSIHISLVESGIRHAKR 130

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLK----NCNFLTEL 112
              L   +   +   LR  + +   L  A + DGD  +R+ PL EL+     N +F+  +
Sbjct: 131 RLSLRADQALEIASLLRFFDTLQFDLKAAIKQDGDWYKRFMPLSELIMHPVINRSFVKLV 190

Query: 113 EEKI---GFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLK--KVAAQIFQ 162
           E+ I   G         I D AS  L   R ER + +E      LD++++  K    +  
Sbjct: 191 EQVIDPDG--------TIKDSASSALRQSR-ERVQTLERKLQQLLDAIIRSQKDDESVLV 241

Query: 163 AGGIDKPLITKRRSRMCVGIKAS-----------HKYLLPDGIALNVSSSGATYFMEPKG 211
           A  ID     +  S     +              + ++L     +  S SG     EP  
Sbjct: 242 AAEIDGRWCIQMSSNQLTSVNGLLLSSYASLSMIYFHILSLEGNMCFSGSGGGTVAEPIA 301

Query: 212 AVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
           AV  N+ +++ + + +A+ E  ILS+LT +I                     ARA +++ 
Sbjct: 302 AVSMND-DLQSARASVAKAEAEILSMLTEKIN--------------------ARATYSRA 340

Query: 271 MDGVCPIL----------------SSQSHVSFDSSI-------NIEGIKHPLLLGSSLRS 307
             G  P +                S QS++S + S+        +    HPLLL    + 
Sbjct: 341 YGGAHPDIYLPPEDGVESLSAGENSLQSNLSSEKSLPRKEWLLYLPRCYHPLLLYQHKKG 400

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
           +          K        T  ++  G    P+P D ++   TRV+VITGPNTGGKT  
Sbjct: 401 IRKTRETIKFHK--------TADTVLSGTP--PIPADFQISKGTRVLVITGPNTGGKTIC 450

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +K++GLA++M+K+GLY+ A    R+PWFD I ADIGD QSL Q+LSTFSGH+ +I +IL 
Sbjct: 451 LKSVGLAAMMAKSGLYVLATESARIPWFDNIYADIGDEQSLLQSLSTFSGHLKQISEILS 510

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRF 486
             +  SLVL+DE+G+GT+P EG AL  +IL+   +    L + TTH+ +L  LK  ++ F
Sbjct: 511 HSTSRSLVLLDEVGAGTNPLEGAALGMAILESFAESGSLLTMATTHHGELKTLKYSNSAF 570

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ-- 544
           ENA  EF    L+PT++ILWG  G SNA+NIA+ +G    II+ A++L      E  +  
Sbjct: 571 ENACMEFDDLNLKPTFKILWGVPGRSNAINIAERLGLPCDIIESARELYGSASAEINEVI 630

Query: 545 ---HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
               R  + YQ L+ E R      R +  LH  ++   + I D A            KE 
Sbjct: 631 LDMERYKQEYQRLLNESR---VYIRLSRELHDNLLIAQKNINDHA-----------TKER 676

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDAS--------ADEINSLI---KESESAI--AAI 648
           ++++QEL  A     + ++    Q R ++        A ++ + +   K+ +S I  +++
Sbjct: 677 RKMRQELTQAGSMTRSTLRRTLQQFRSSAAQSSQSKVATQLQTKVETTKDEDSGIRSSSV 736

Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
           VE  RP     +SE   +   P+ G  V V SLG K ATV++V      +LVQ G M+++
Sbjct: 737 VE-RRP-----ISEA-AAQKVPEVGSSVFVSSLGKK-ATVLKVEQSKKEILVQVGIMKMK 788

Query: 709 VKKNNI 714
           VK  ++
Sbjct: 789 VKLTDV 794


>gi|449017364|dbj|BAM80766.1| DNA mismatch repair protein MutS, chloroplast precursor
           [Cyanidioschyzon merolae strain 10D]
          Length = 1029

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 154/425 (36%), Positives = 236/425 (55%), Gaps = 56/425 (13%)

Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
           AS++L ++R + +R  E +   L++    I Q+ G  +     T R  R  + +KA+HK 
Sbjct: 338 ASDELRVVRTQLQRIKERIKDELQR----IIQSKGDALQDRTPTTRYDRQVLAVKATHKR 393

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P GI  + S++G+T F+EP   VE N+   RLS  E A E  I + L+  +  +   +
Sbjct: 394 RIP-GIVHDYSNTGSTVFVEPHAIVELNSELRRLSRRESAIERDIWNQLSKRLHAASVRL 452

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
               + +++ID + ARA +A+ +       ++ S +  D    I G  HPLLL  SL+S+
Sbjct: 453 SSTFEALIDIDFSVARARYARHIGASLVRFAADSEMPVD----IRGACHPLLLWRSLKSM 508

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
            +                              VPID  +       ++TG N GGKT + 
Sbjct: 509 ESV-----------------------------VPIDFHLRGIASAAILTGANAGGKTLAA 539

Query: 369 KTLGLASLMSKAGLYLPAKN-HPRL------------PWFDLILADIGDHQSLEQNLSTF 415
           KTLGL  LM+K+G+ +P ++  P +            P+FD +LADIGD QSLEQNLSTF
Sbjct: 540 KTLGLIVLMAKSGIPIPRRHADPNMSPTTLLDEDVTVPYFDRVLADIGDEQSLEQNLSTF 599

Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR--VGLAVVTTHY 473
           SGHI RI +IL+  + +SLVL+DE+G+GTDP+EG AL  ++++YL ++  V    VTTH+
Sbjct: 600 SGHIRRIGEILQCATADSLVLLDELGAGTDPAEGAALGIALVRYLVEKKNVRFVFVTTHH 659

Query: 474 ADLSCLKDKD-TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
           ++L  L   + +R+EN + EF  + L PTYR+LWG  G S AL +A+ +G D  I+Q A+
Sbjct: 660 SELKTLFFMEPSRYENVSVEFDTDRLEPTYRLLWGVAGRSYALLVARRLGLDHDILQEAE 719

Query: 533 KLVER 537
            L+ER
Sbjct: 720 NLLER 724


>gi|331086755|ref|ZP_08335832.1| hypothetical protein HMPREF0987_02135 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330409921|gb|EGG89356.1| hypothetical protein HMPREF0987_02135 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 790

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 182/549 (33%), Positives = 271/549 (49%), Gaps = 51/549 (9%)

Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
           +IT R  R C+ +KA ++  +  G+  + SS+G+T F+EP   V+ NN    L   E  E
Sbjct: 187 IITMRGDRYCLPVKAEYRSQV-QGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQEE 245

Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
              IL+ L+A+ A    EI+     + E+D  FA+  FA  ++   PI +   H      
Sbjct: 246 IQVILANLSADAAGYVTEIRRNYKLLTELDFIFAKGSFALSLNASKPIFNDHGH------ 299

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
           I+I   +HPLL    +                                   VPI + +  
Sbjct: 300 IHIREGRHPLLDKKKV-----------------------------------VPITVTLGD 324

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
              ++++TGPNTGGKT S+KT+GL +LM +AGL++PA +   L  F  + ADIGD QS+E
Sbjct: 325 AFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELALFHEVYADIGDEQSIE 384

Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
           Q+LSTFS H++ IV  L+ V   SLVL DE+G+GTDP+EG ALATSIL YL +R    + 
Sbjct: 385 QSLSTFSSHMTNIVSFLQHVDEHSLVLFDELGAGTDPTEGAALATSILSYLHERKIRTMA 444

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTHY++L          ENA  EF +ETLRPTY +L G  G SNA  I+  +G    II 
Sbjct: 445 TTHYSELKVYALSTPGVENACCEFDVETLRPTYHLLIGIPGKSNAFAISSKLGLPDYIIA 504

Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
            A+   ERL    Q     +L   L   RR +E + +  A+   E+  L +++E + + L
Sbjct: 505 DAK---ERL--SEQDESFEDLLADLENSRRTIEKEQQEIAAYKREVEALKQKLEQKQERL 559

Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAI 648
           D R   +  +  ++    L  AK   D  +++F    + + SA E+    +     I   
Sbjct: 560 DERKERIINEANEKANAILREAKEVADETMKNFRKFGKENISAAEMERERERLRQKIKKT 619

Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
               + D      +   S F  + GE V V SL +   TV  +P     + VQ G +R +
Sbjct: 620 GSGVKLDTKKPKKQHKPSDF--KLGEAVKVLSL-NLTGTVSSLPNAKGDLFVQMGILRSQ 676

Query: 709 VKKNNIRPI 717
           V  +++  I
Sbjct: 677 VNISDLEII 685


>gi|336114602|ref|YP_004569369.1| MutS2 family protein [Bacillus coagulans 2-6]
 gi|335368032|gb|AEH53983.1| MutS2 family protein [Bacillus coagulans 2-6]
          Length = 741

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 216/694 (31%), Positives = 337/694 (48%), Gaps = 78/694 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS I DI   L  A  G  L+P E+  +  T+  V+   K+  E    +  +L    P+L
Sbjct: 20  LSGIYDIRRHLKRAAIGGRLNPQELVQIASTIH-VSRTMKRFIEGIAEEETAL----PIL 74

Query: 101 ELLKNCN---FLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLL 153
            L    +    LT LE  I   +D    I LD ASE L  IR       +R  E L+  +
Sbjct: 75  TLTSMADRIAVLTPLEHDIRNAVDENGEI-LDTASETLRQIRHGLRGTERRIREKLEGYI 133

Query: 154 K-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
           + K AA++     +   +IT R  R  + +K  ++     GI  + SSSG T F+EP+  
Sbjct: 134 RGKNAAKM-----LSDAIITIRNDRYVIPVKQEYRANY-GGIVHDQSSSGQTLFIEPQSV 187

Query: 213 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
           V+ NN        E  E   ILS L+A +A +  E+  +++ + + D  FA+A + + + 
Sbjct: 188 VDLNNQLREWHLKEQQEIERILSELSAAVAAAGGELNTIVEILADFDFMFAKALYGRSIK 247

Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
           G  P++++        +I +   +HPLL                P               
Sbjct: 248 GSKPVINNHG------AIRMFKARHPLL----------------P--------------- 270

Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
               +D  VP DI +  +   +VITGPNTGGKT ++KT+GL +LM++AGL +PA +   +
Sbjct: 271 ----ADKVVPNDITLGQDYTTIVITGPNTGGKTITLKTIGLCTLMAQAGLQIPALDGSEM 326

Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
             F  + ADIGD QS+EQ+LSTFS H++ IV+IL+ V  +SLVL DE+G+GTDP EG AL
Sbjct: 327 AVFKEVFADIGDEQSIEQSLSTFSSHMTNIVEILKRVDDQSLVLFDELGAGTDPQEGAAL 386

Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
           A SIL  +  R    V TTHY +L           NA+ EF +ETL PTYR+L G  G S
Sbjct: 387 AISILDEVYKRGARVVATTHYPELKAYAYNREGVVNASVEFDVETLSPTYRLLIGVPGRS 446

Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 572
           NA  I++ +G    +I  AQ L+     E +      +  +L   RR+ E + + A  L 
Sbjct: 447 NAFEISRRLGLSPSVIAHAQSLIGADTNEVEN-----MIAALESARREAEKERQEAQKLL 501

Query: 573 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 632
            +   L+ +++ + +    R   L  K  ++  + +  AK + + +++D      ++ A+
Sbjct: 502 EDAEGLHHDLQKQMRQFYARRDELYGKAEKKAAKVVEEAKEKAEEIIRDLRKMQLESKAN 561

Query: 633 EINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 691
                +KE E   A   +E   P  D   +         Q G++V V S   K   + + 
Sbjct: 562 -----VKEHELIDARKQLEELAPKLDRKPAAKAKKQHVYQPGDEVKVLSFNQKGTLLEQT 616

Query: 692 PGDDDTVLVQYGKMRVRVKKNN---IRPIPNSKR 722
            G +   LVQ G ++++VK+++   IRP P  K+
Sbjct: 617 AGGE--WLVQMGILKMKVKESDMEYIRP-PQQKQ 647


>gi|422701663|ref|ZP_16759503.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX1342]
 gi|315170093|gb|EFU14110.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX1342]
          Length = 788

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 196/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                NP K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLNPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|289422692|ref|ZP_06424532.1| MutS2 family protein [Peptostreptococcus anaerobius 653-L]
 gi|289156871|gb|EFD05496.1| MutS2 family protein [Peptostreptococcus anaerobius 653-L]
          Length = 807

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 187/602 (31%), Positives = 305/602 (50%), Gaps = 62/602 (10%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
           +G  +++K   PF K  +  + L   T A   +++   + +  I +I  +   A  G +L
Sbjct: 26  LGRNIIKKLN-PFSKYDQVKEALEETTEAQSILIKRGHVSMQGIHNIEDMAKRADIGGVL 84

Query: 61  SPSEICAVRRTLRAVNNVWKKLT-----------EAAELDGDSLQRYSPLLELLKNCNFL 109
             + +  V  T+RA   +   L+           E +  D + + RY P+++ +    ++
Sbjct: 85  DNASLIKVADTMRATRILSNLLSGDIKVETFGNAENSNKDKEEVTRY-PIIQTMAQSLYV 143

Query: 110 -TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
             ++E+ I   I   + +  D AS +L +IR    +  +N+ S L  + +       +  
Sbjct: 144 HRDVEDAIYNAIVSDIEV-SDNASSELRMIRRRILQKNQNIRSKLNSIISSTSYQKYLQD 202

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
            +I+ R  R  + +KA ++ ++  GI  + S SGAT F+EP   VE NN   +L   E  
Sbjct: 203 AIISMRGDRFVIPVKAEYRSVIS-GIIHDQSQSGATLFIEPMSIVEMNNDLRQLKLQETE 261

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ L+  + +  RE+    + +  +D AFA+   +  M  V PIL+       D 
Sbjct: 262 EIERILAELSGMVGEVARELISNQEILARLDFAFAKGKLSIAMKAVDPILNR------DK 315

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
           S  I   +HPL+                  K+ V N+ + +G       DF         
Sbjct: 316 SFRIVKGRHPLI----------------DKKTVVANT-VYLGK------DFSS------- 345

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
                ++ITGPNTGGKT ++K +GL SLM++ GL++PA     +  FD + ADIGD+QS+
Sbjct: 346 -----LLITGPNTGGKTVTIKMVGLFSLMTQCGLHIPADFGTSMCVFDQVFADIGDNQSI 400

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQNLSTFS H++ IVDI++ V+ +SLV+ DE+G+GTDP EG ALA +IL+ +R    L +
Sbjct: 401 EQNLSTFSSHMTSIVDIVDRVTEDSLVIFDELGAGTDPEEGAALAIAILEDIRTVGALCI 460

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L          ENAA EF +ETL PTYR+L G  G SNA  I++ +G +  +I
Sbjct: 461 ATTHYSELKKYALAKKGVENAAVEFDMETLSPTYRLLIGVPGKSNAFEISRKLGLNESVI 520

Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
             A+  ++    E +     ++ QS+ + R K E +   A ++ +EI     E ED+ K 
Sbjct: 521 LNAKFYMDNDDIELE-----DVLQSVEKNRLKTEEELSRAEAMRSEIEARKNEYEDKIKK 575

Query: 589 LD 590
           L+
Sbjct: 576 LE 577


>gi|229829396|ref|ZP_04455465.1| hypothetical protein GCWU000342_01486 [Shuttleworthia satelles DSM
           14600]
 gi|229791827|gb|EEP27941.1| hypothetical protein GCWU000342_01486 [Shuttleworthia satelles DSM
           14600]
          Length = 816

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 192/586 (32%), Positives = 284/586 (48%), Gaps = 82/586 (13%)

Query: 149 LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFME 208
           L+ +L   A    Q G     +IT R  R C+ ++A +K  +P G+  + SSSGAT F+E
Sbjct: 171 LNRMLSSSARDYLQDG-----VITMRDGRYCLPVRAEYKNYVP-GMVHDSSSSGATLFIE 224

Query: 209 PKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
           P   V  NN    L   E  E   IL  L+ ++ ++   I+   DR+ E+D  FA+   A
Sbjct: 225 PMSVVNLNNELRELEGKEEEEIARILRSLSDQVLENIETIQIDFDRLAELDFIFAKGQLA 284

Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
             M       +SQ   + +  I+++  +HPLL                            
Sbjct: 285 ADMS------ASQPDFNEEGIISLKAARHPLL---------------------------- 310

Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
                    +  VPIDI +     ++V+TGPNTGGKT S+KT GL +LM +AGL++PA++
Sbjct: 311 -------DKNIVVPIDISLGQNYNLLVVTGPNTGGKTVSLKTCGLLTLMGQAGLHIPARD 363

Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV------SRESLVLIDEIGS 442
           H +L  FD + ADIGD QS+EQ+LSTFS H++ IV IL+ V        ++LVL DE+ +
Sbjct: 364 HSQLAVFDNVYADIGDEQSIEQSLSTFSSHMTNIVHILDGVDSVLANGHDALVLFDELCA 423

Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
           GTDP+EG ALAT+IL  L  R    + TTHY++L          ENA+ EFSLETL PTY
Sbjct: 424 GTDPAEGAALATAILDRLHRRQVRVMATTHYSELKVYALSTEGVENASCEFSLETLSPTY 483

Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 562
           R+L G  G SNA  I+  +G    II+ AQ  ++          +S  ++ L+ +   LE
Sbjct: 484 RLLIGIPGKSNAFAISSKLGLAADIIRDAQSRID---------EESVSFEDLLAD---LE 531

Query: 563 SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE-------LNFAKVQI 615
           ++        AE       I+     LD+R A L A + + +Q         L  AK   
Sbjct: 532 NRRVAIEKTQAETRAAKASIDKTRIQLDQRLAQLNASKDKVLQSANLEAARILKEAKETA 591

Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP----- 670
           D  ++DF    R A+AD     +++   A+   ++  +     S          P     
Sbjct: 592 DKTIRDFHKYGRAAAADMTR--MEQDRRALGEKLKTRQNKSRASAGMEQERRKAPVPKAK 649

Query: 671 --QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
               G++V V S+G   ATV  +P     + VQ G +R RVK  ++
Sbjct: 650 DLHIGDKVKVLSMG-VTATVHSLPDKSGHLEVQMGIIRSRVKLTDL 694


>gi|327475223|gb|AEA77206.1| MutS2 [Exiguobacterium sp. EPVM]
          Length = 784

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 224/731 (30%), Positives = 348/731 (47%), Gaps = 110/731 (15%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQR 95
           L L  + D+ G +  A  G +LS SE+ AV   +   R V N ++KL E    D + L R
Sbjct: 62  LPLGGLTDVRGEVKRAAIGSVLSTSELLAVAAVMYSGRQVKNFFEKLHE----DNEDL-R 116

Query: 96  YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LD 150
              L E  +    L E+E+ I   ID +   + D AS+ L  +R +  R+ E      +D
Sbjct: 117 IPRLDEYAERLTKLIEVEQAIRHAIDDQG-TVQDSASDRLRGLRTQL-RSFEGSVRSRID 174

Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
           ++L+  A  +  A      ++T R  R  V +K  ++     GI  + S+SG T F+EP+
Sbjct: 175 NILRNNAKMLSDA------IVTIRNDRYVVPVKMEYRQAFG-GIVHDQSASGQTLFIEPQ 227

Query: 211 GAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
             V  NN   EVRL   E AE   ILS L+  +      +   +D +  +D  FA+  + 
Sbjct: 228 AIVSINNEIQEVRLK--ERAEIDRILSELSNLVGGVSDSVVINLDVLATLDFVFAKVAYG 285

Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
             +    P L+    +    +      +HP +                P           
Sbjct: 286 HELKATEPKLNDAREIKLKQA------RHPFI----------------P----------- 312

Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
                    D  VPI +++      +VITGPNTGGKT ++KTLGL  LM ++GLY+PA+ 
Sbjct: 313 --------QDEVVPITVELGEAFTSLVITGPNTGGKTVTLKTLGLLQLMVQSGLYVPAEF 364

Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
              L  FD I ADIGD QS+EQ+LSTFS H++ IV +L+ +   SLVL DE+G+GTDP E
Sbjct: 365 GTELSVFDAIYADIGDEQSIEQSLSTFSSHMTNIVSMLDKIDFMSLVLFDELGAGTDPQE 424

Query: 449 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
           G ALA +IL  ++ R      TTHY++L           NA+ EF +E+L PTYR+L G 
Sbjct: 425 GAALAIAILDEVKRRGARVAATTHYSELKAYAYNREGVMNASMEFDIESLSPTYRLLIGV 484

Query: 509 TGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEE 557
            G SNA  I++ +G   ++I +A           + ++  L   +Q  R  +L + L+ +
Sbjct: 485 PGRSNAFEISRRLGLSEQVIDKARSHVGTDAESVESMINELEAAKQ--RAEQLEKELIVK 542

Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
           R  LE +    A+  A++ +  RE        D      +A+  + V+Q    AK Q + 
Sbjct: 543 RHDLEEE---QAAFEAKMTEFERE-------RDTMYGEAEARAEKAVEQ----AKRQANE 588

Query: 618 VVQDFENQLRDASADEINSLIKESESAIAAI--VEAHRPD--DDFSVSETNTSSFTPQF- 672
           V+ D   +LR+        ++KE E  IAA   +E+ +P   D         +     F 
Sbjct: 589 VI-DRLKKLRE------EGIVKEHE-IIAAKKQLESAKPTLRDKKIQKVKQKAQQKRTFS 640

Query: 673 -GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
            GE+V V +   K   V ++  +D+   VQ G M+V VK ++++ I  SK ++  +    
Sbjct: 641 KGEEVKVTTFNQKGYIVKQL--NDNEYNVQVGIMKVNVKADDLQKIGPSKEQSLQSKGSS 698

Query: 732 LRKQVCTCTSL 742
           L++Q  T + L
Sbjct: 699 LKRQSSTKSEL 709


>gi|345861074|ref|ZP_08813351.1| mutS2 family protein [Desulfosporosinus sp. OT]
 gi|344325837|gb|EGW37338.1| mutS2 family protein [Desulfosporosinus sp. OT]
          Length = 787

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 204/708 (28%), Positives = 341/708 (48%), Gaps = 77/708 (10%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
           IPF    E  +  L +T     +++  PL  +   ++I   +   + G ++   E+  +R
Sbjct: 37  IPF-IDWESVRLALQETEEGKNLLRGNPLFSVRGAKEIRPYIERCLRGGVIHGEELLEIR 95

Query: 70  RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLII 127
            TLR    +   L E  E        +  L E++       +LE++I  CI  D K   +
Sbjct: 96  DTLRVGRKIKLLLLELNE-------GFPGLWEIVLPIEPQKDLEDEISRCIAEDGK---V 145

Query: 128 LDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
            D AS +L  +R      + R  E+L++ L+  A Q      +  P+IT+R  R  + IK
Sbjct: 146 ADSASPELADLRRALNRLQNRIRESLEATLRNSAYQKM----LQDPIITQRSDRYVLPIK 201

Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
             ++   P GI  + S+SGAT F+EP   V   N    +   E  E   IL +L+++I  
Sbjct: 202 QEYRTAFP-GIVHDQSASGATLFIEPMPVVHLGNELREVILKEQREVMRILQMLSSQIEA 260

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
               +  L + + ++DL  A+A  +  M+   P L     +    +      +HPL+LG 
Sbjct: 261 RVDAVAELHEALAKLDLVVAKAQLSVAMNAGAPELVKGQQMKLVQA------RHPLILGK 314

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                                                VP+ +++  +   +V+TGPNTGG
Sbjct: 315 V------------------------------------VPLSLELGIDFDTLVVTGPNTGG 338

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT ++K +GL + M+++GL++PA+N  R+  F  I ADIGD QS+EQ+LSTFSGH+  IV
Sbjct: 339 KTVALKVVGLMAAMTQSGLHIPAENDSRMGVFTQIFADIGDEQSVEQSLSTFSGHMKNIV 398

Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
           +I++     SLVL+DE+G+GTDP+EG ALA  IL  L +R    V TTHY  L     + 
Sbjct: 399 EIIDRSDERSLVLLDEVGAGTDPTEGAALAMGILAELHERGCRTVSTTHYGALKTFAYET 458

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
            R +NA+ EF  ETLRPTYR+L G  G SNA  IA  +G   +++++A   V     ER+
Sbjct: 459 PRVKNASVEFDTETLRPTYRLLIGIPGKSNAFTIAGRLGLSEQVLEKANTFV----TERE 514

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
               ++L ++L E  R++E + +   +    +    + +E+++  LD     L +    +
Sbjct: 515 MQ-VADLIENLGETHREIELEKQKVKTGRQAVERQSKALEEKSILLDEEYELLLSMAKDE 573

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
             + +  A+ + D ++++ +  L+  +  + +  I+++      I  + R D    V   
Sbjct: 574 ASELVRQARREADAIIEELKAALKKENKQQQD--IEKARQGFHRI--SARLDKGRKVQRP 629

Query: 664 NTSSFTPQ--FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
            +     Q   G+ V +  L  K   V+++P  +  VLVQ G M+V V
Sbjct: 630 GSGLVADQIKLGQTVQMTKLRQK-GQVIKLPNANGEVLVQAGIMKVMV 676


>gi|251810592|ref|ZP_04825065.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876408|ref|ZP_06285275.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis SK135]
 gi|417913383|ref|ZP_12557050.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU109]
 gi|418624906|ref|ZP_13187566.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU125]
 gi|420172837|ref|ZP_14679335.1| MutS2 family protein [Staphylococcus epidermidis NIHLM067]
 gi|420198524|ref|ZP_14704232.1| MutS2 family protein [Staphylococcus epidermidis NIHLM020]
 gi|420226953|ref|ZP_14731726.1| MutS2 family protein [Staphylococcus epidermidis NIH05003]
 gi|421607338|ref|ZP_16048584.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis AU12-03]
 gi|251805752|gb|EES58409.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295433|gb|EFA87960.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis SK135]
 gi|341655665|gb|EGS79389.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU109]
 gi|374826171|gb|EHR90079.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU125]
 gi|394241514|gb|EJD86928.1| MutS2 family protein [Staphylococcus epidermidis NIHLM067]
 gi|394264219|gb|EJE08915.1| MutS2 family protein [Staphylococcus epidermidis NIHLM020]
 gi|394297454|gb|EJE41051.1| MutS2 family protein [Staphylococcus epidermidis NIH05003]
 gi|406657130|gb|EKC83523.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis AU12-03]
          Length = 782

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 207/681 (30%), Positives = 336/681 (49%), Gaps = 81/681 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+  E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  +  +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P          D +I +    HPLL            +N+     DVE            
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
           +I+K +G    II +A+ ++     E     +S  + S  + ++R +L+   R A   H 
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
            +   Y++ ++  K L   A   K K  ++V+     A  + D ++++  N LRD    E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANKRVKS----ATKEADEILKELRN-LRDHKGAE 605

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
               +KE E     I +  + DD +            ++     G++V V S G K   V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656

Query: 689 VEVPGDDDTVLVQYGKMRVRV 709
           +E+ G+++ V VQ G +++++
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL 676


>gi|229550105|ref|ZP_04438830.1| MutS family DNA mismatch repair protein [Enterococcus faecalis ATCC
           29200]
 gi|255972883|ref|ZP_05423469.1| DNA mismatch repair protein mutS [Enterococcus faecalis T1]
 gi|257422707|ref|ZP_05599697.1| MutS2 family protein [Enterococcus faecalis X98]
 gi|312952408|ref|ZP_07771283.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0102]
 gi|384518505|ref|YP_005705810.1| mutS2 protein [Enterococcus faecalis 62]
 gi|422693114|ref|ZP_16751129.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0031]
 gi|422706763|ref|ZP_16764461.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0043]
 gi|422726956|ref|ZP_16783399.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0312]
 gi|229304809|gb|EEN70805.1| MutS family DNA mismatch repair protein [Enterococcus faecalis ATCC
           29200]
 gi|255963901|gb|EET96377.1| DNA mismatch repair protein mutS [Enterococcus faecalis T1]
 gi|257164531|gb|EEU94491.1| MutS2 family protein [Enterococcus faecalis X98]
 gi|310629792|gb|EFQ13075.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0102]
 gi|315152573|gb|EFT96589.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0031]
 gi|315155852|gb|EFT99868.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0043]
 gi|315157981|gb|EFU01998.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0312]
 gi|323480638|gb|ADX80077.1| mutS2 protein [Enterococcus faecalis 62]
          Length = 788

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 196/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                NP K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|317059473|ref|ZP_07923958.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_5R]
 gi|313685149|gb|EFS21984.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_5R]
          Length = 778

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 203/695 (29%), Positives = 344/695 (49%), Gaps = 80/695 (11%)

Query: 39  LDLSTIEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
           LD+  ++DI  +     + G  L   E+  +   LR       +L        + L +Y 
Sbjct: 63  LDVRHLKDICALTEKIKLIGTYLEVDELWDININLRFFRIFQTQL--------EDLGKYK 114

Query: 98  PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
            L + +K  + L  +E+ I   ID +  I  D AS DL  IR  +K   +N+     ++ 
Sbjct: 115 ALRDYMKQVSPLRLIEDLISKAIDAEKQI-KDDASLDLRDIRIHKKVLAQNIRRKFDELF 173

Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
            +   +    + +IT+R  RM V +K   K L+  GI  + SSSG T F+EP   V  NN
Sbjct: 174 EEPSVSAAFQERIITERDGRMVVPVKLDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNN 232

Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
               L   E  E   IL  L+ +I   + EI  + + +L ID   A+A F          
Sbjct: 233 KMRELETKEKEEIRKILLRLSEQIRNHQDEIYKIGNMILYIDRLQAKANFG--------- 283

Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
           L    HV             P++ G  +  L  A     P K  V               
Sbjct: 284 LEEACHV-------------PMVQGKEILYLEKARHPFIP-KEKV--------------- 314

Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
              VP+  ++  + ++++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + R+ +F  
Sbjct: 315 ---VPLTFEIGKDYKILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASQNSRIGFFQG 371

Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
           + ADIGD QS+EQ+LS+FS H++ + DILE V R  LVL+DE+GSGTDP+EG A A SI+
Sbjct: 372 VFADIGDEQSIEQSLSSFSAHVTNLQDILEQVHRNCLVLLDELGSGTDPTEGSAFAMSII 431

Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
            YL+++   +++TTHY+++      +   E A+ EF   TL PTYR+L G  G+SNAL I
Sbjct: 432 DYLKEKKCNSIITTHYSEVKAHGYNEEGIETASMEFDTTTLSPTYRLLMGIPGESNALTI 491

Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY----QSLMEERRKLESQ---ARTAAS 570
           AK +G  ++II++AQ  +       + ++K EL     ++  E   K++++    R AA 
Sbjct: 492 AKRLGIPQEIIEKAQSYIS------EDNKKIELMINNIKNKSESLDKMQAELTGLREAAK 545

Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
           ++ E      + E+E K L+R    +  K  +  ++ +N  + +   +++  + +  + S
Sbjct: 546 MNQE------KWEEERKALEREKNEILKKAYEDSEKMMNEMRAKASALIEKIQKE--EHS 597

Query: 631 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATV 688
            ++     K+ +  +  +  A + + + +++   T      F  G++V VK++ ++ ATV
Sbjct: 598 KEQ----AKQIQKNLNMLSSALKEEKNKTITLNKTMKKKAHFKEGDRVFVKNI-NQFATV 652

Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           +++    ++  VQ G +++ V    IR     K K
Sbjct: 653 LKINAMKESAQVQAGILKLEVPFEEIRVTEEKKEK 687


>gi|315917841|ref|ZP_07914081.1| DNA mismatch repair protein mutS [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313691716|gb|EFS28551.1| DNA mismatch repair protein mutS [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 778

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 203/695 (29%), Positives = 344/695 (49%), Gaps = 80/695 (11%)

Query: 39  LDLSTIEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
           LD+  ++DI  +     + G  L   E+  +   LR       +L        + L +Y 
Sbjct: 63  LDVRHLKDICALTEKIKLIGTYLEVDELWDININLRFFRIFQTQL--------EDLGKYK 114

Query: 98  PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
            L + +K  + L  +E+ I   ID +  I  D AS DL  IR  +K   +N+     ++ 
Sbjct: 115 ALRDYMKQVSPLRLIEDLISKAIDAEKQI-KDDASLDLRDIRIHKKVLAQNIRRKFDELF 173

Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
            +   +    + +IT+R  RM V +K   K L+  GI  + SSSG T F+EP   V  NN
Sbjct: 174 EEPSVSAAFQERIITERDGRMVVPVKLDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNN 232

Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
               L   E  E   IL  L+ +I   + EI  + + +L ID   A+A F          
Sbjct: 233 KMRELETKEKEEIRKILLRLSEQIRNHQDEIYKIGNMILYIDRLQAKANFG--------- 283

Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
           L    HV             P++ G  +  L  A     P K  V               
Sbjct: 284 LEEACHV-------------PMVQGKEILYLEKARHPFIP-KEKV--------------- 314

Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
              VP+  ++  + ++++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + R+ +F  
Sbjct: 315 ---VPLTFEIGKDYKILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASQNSRIGFFQG 371

Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
           + ADIGD QS+EQ+LS+FS H++ + DILE V R  LVL+DE+GSGTDP+EG A A SI+
Sbjct: 372 VFADIGDEQSIEQSLSSFSAHVTNLQDILEQVHRNCLVLLDELGSGTDPTEGSAFAMSII 431

Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
            YL+++   +++TTHY+++      +   E A+ EF   TL PTYR+L G  G+SNAL I
Sbjct: 432 DYLKEKKCNSIITTHYSEVKAHGYNEEGIETASMEFDTTTLSPTYRLLMGIPGESNALTI 491

Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY----QSLMEERRKLESQ---ARTAAS 570
           AK +G  ++II++AQ  +       + ++K EL     ++  E   K++++    R AA 
Sbjct: 492 AKRLGIPQEIIEKAQSYIS------EDNKKIELMINNIKNKSESLDKMQTELTGLREAAK 545

Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
           ++ E      + E+E K L+R    +  K  +  ++ +N  + +   +++  + +  + S
Sbjct: 546 MNQE------KWEEERKALEREKNEILKKAYEDSEKMMNEMRAKASALIEKIQKE--EHS 597

Query: 631 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATV 688
            ++     K+ +  +  +  A + + + +++   T      F  G++V VK++ ++ ATV
Sbjct: 598 KEQ----AKQIQKNLNMLSSALKEEKNKTITLNKTMKKKAHFKEGDRVFVKNI-NQFATV 652

Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           +++    ++  VQ G +++ V    IR     K K
Sbjct: 653 LKINAMKESAQVQAGILKLEVPFEEIRVTEEKKEK 687


>gi|394991851|ref|ZP_10384649.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. 916]
 gi|393807396|gb|EJD68717.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. 916]
          Length = 785

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 213/722 (29%), Positives = 357/722 (49%), Gaps = 79/722 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L + QK L++   A A+M+ +       + DI   L  A  G +L+P+E   +   L AV
Sbjct: 40  LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             +   +++  E DG S+    PL++   +    L +LE +I  CID    + LD AS  
Sbjct: 100 KQMKHFISQMTE-DGVSI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153

Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++   
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT   A+  +EI  
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            ++ +  +D  FA+A +A+ M    P+++       D  I ++  +HPLL          
Sbjct: 269 DVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P    V N                   DI++  +   +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL ++M++AGL++PA        FD + ADIGD QS+EQ+LSTFS H+  IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETL PTY++L G  G SNA  I++ +G    II +A+  +        +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521

Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
              SL + +++ + +     S+  E   L++E++ +  +L+ +   +  +  Q+  ++L 
Sbjct: 522 MIASLEKSKKRADEELSETESIRKEAEKLHKELQQQIIELNAQKDKMMEEAEQKAAEKLE 581

Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            A  + + ++++    + + R     E+    K    A+ A  ++ +P+           
Sbjct: 582 AAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTE----KKR 637

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN---IRPIPNSKRK 723
              P  G++V V + G K A ++E  G+ +   VQ G ++++VK+ +   ++  P  K++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSAPEPKKE 693

Query: 724 NA 725
            A
Sbjct: 694 KA 695


>gi|172058180|ref|YP_001814640.1| MutS2 family protein [Exiguobacterium sibiricum 255-15]
 gi|229486374|sp|B1YJY5.1|MUTS2_EXIS2 RecName: Full=MutS2 protein
 gi|171990701|gb|ACB61623.1| MutS2 family protein [Exiguobacterium sibiricum 255-15]
          Length = 788

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 214/699 (30%), Positives = 331/699 (47%), Gaps = 102/699 (14%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
           D+   +  A  G +LS SE+ AV   + +   V K   E    D   L R   L   ++ 
Sbjct: 70  DVRSEVKRAEIGSVLSTSELLAVADVVYSGRQV-KAFQERLHEDHPDL-RLPALDSRIEQ 127

Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQI 160
              L E+E+ I   ID +   + D AS+ L  +R++  R++E      +D +L+  +  +
Sbjct: 128 ITKLVEIEQGIRHAIDDQG-TVQDSASDKLRALRSQL-RSLEGQVRSKIDGVLRNKSKML 185

Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN--M 218
             A      ++T R  R CV +K  ++     GI  + S+SGAT F+EP+  V  NN   
Sbjct: 186 SDA------IVTMRNDRYCVPVKQEYRQAF-GGIVHDQSASGATLFIEPQAVVAANNEIQ 238

Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
           E RL   E AE   IL+ L+A +      ++  +D + E+D   A+A +   +  V P L
Sbjct: 239 EARLK--ERAEIERILAQLSALVGSVGDSLRINVDVLAELDFIMAKALYGHTIRAVEPRL 296

Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
           +   H+    +      +HP +                P                    D
Sbjct: 297 NENRHIVLKEA------RHPFI----------------P-------------------DD 315

Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
             VPI + +  E   +VITGPNTGGKT ++KT+GL  LM ++GLY+PA +   L  FD I
Sbjct: 316 EVVPITVSLGGEFTSLVITGPNTGGKTVTLKTIGLLQLMVQSGLYVPAADETELSVFDAI 375

Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
            ADIGD QS+EQNLSTFS H++ IV ++  +   SLVL DE+G+GTDP+EG ALA +IL 
Sbjct: 376 YADIGDEQSIEQNLSTFSSHMTNIVSMMGKIDFMSLVLFDELGAGTDPTEGAALAIAILD 435

Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
            ++ R      TTHY++L           NA+ EF +E+L PTYR+L G  G SNA  I+
Sbjct: 436 EVKRRGARVAATTHYSELKAYGYNREGVVNASMEFDVESLSPTYRLLIGVPGRSNAFEIS 495

Query: 519 KSIGFDRKII-----------QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 567
           K +G + ++I           Q  + ++ RL   +Q  R   L + L++E+++L  +   
Sbjct: 496 KRLGLEDRVIDAARDQVGTDAQSVETMIGRLEEAKQ--RAESLERELLQEQQRLVEEREE 553

Query: 568 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 627
                AEI     EI  +A++   RA     KE + V + L                +LR
Sbjct: 554 FEREQAEIHQEKNEILAKAEEKATRAVERAQKEAEAVIKRL---------------KELR 598

Query: 628 DASADEINSLIKESESAIAAIVEAHRP---DDDFSVSETNTSSFTPQF--GEQVHVKSLG 682
           DA A + + LI+  +      +E  +P   D   +  +  T+   P F  GE+V V +  
Sbjct: 599 DAGAVKEHELIEARKQ-----LEQAKPSLQDQRIAKVKAKTNQ-APVFAKGEEVKVTTFN 652

Query: 683 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
            K   + +    + T  VQ G M+V VK +++  +   K
Sbjct: 653 QKGYIINQNSNGEYT--VQVGIMKVNVKPSDLAKVGEVK 689


>gi|420194100|ref|ZP_14699929.1| MutS2 family protein [Staphylococcus epidermidis NIHLM021]
 gi|394266798|gb|EJE11423.1| MutS2 family protein [Staphylococcus epidermidis NIHLM021]
          Length = 782

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 206/681 (30%), Positives = 336/681 (49%), Gaps = 81/681 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+  E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  +  +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P    +  +   ++       HPLL            +N+     DVE            
Sbjct: 295 PTFKEERTIYLPNAF------HPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDYVRCLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
           +I+K +G    II +A+ ++     E     +S  + S  + ++R +L+   R A   H 
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
            +   Y++ ++  K L   A   K K  Q+V+     A  + D ++++  N LRD    E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE 605

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
               +KE E     I +  + DD +            ++     G++V V S G K   V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656

Query: 689 VEVPGDDDTVLVQYGKMRVRV 709
           +E+ G+++ V VQ G +++++
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL 676


>gi|222151569|ref|YP_002560725.1| recombination and DNA strand exchange inhibitor protein
           [Macrococcus caseolyticus JCSC5402]
 gi|222120694|dbj|BAH18029.1| recombination and DNA strand exchange inhibitor protein homolog
           [Macrococcus caseolyticus JCSC5402]
          Length = 783

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 341/709 (48%), Gaps = 83/709 (11%)

Query: 31  LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN---NVWKKLTEAAE 87
           + M Q++P  +S + DI  ++  AV G +LS  E+  ++  ++ VN        L E  E
Sbjct: 61  IEMTQTEP-GMSMLSDIQSLVRRAVIGSVLSVVELNKIKNNIKVVNRYKTYIANLYEERE 119

Query: 88  LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME 147
           L+   +  Y    +L +    +TEL E I     C    + D AS  L  IR E  R   
Sbjct: 120 LEIPVM--YHKFQQLPQ----VTELAESIQS--KCDETTLFDHASPKLSEIRQEMNRINR 171

Query: 148 NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 207
            +   L+ +         +   ++T R  R  + +++ +K   P GI  + SSSG T+++
Sbjct: 172 RIKERLESIVRSSNNQKKLSDAIVTIRNGRQVIPVRSEYKQDFP-GIVHDTSSSGQTFYI 230

Query: 208 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 267
           EP   V+ +     +++ E  E   IL  LT E+A+ +  + Y  D + ++D+  A+A +
Sbjct: 231 EPNSIVQLSTELSAVTHREQEEVERILYELTNEVAEYDNALTYSTDVLSDLDVLMAKAKY 290

Query: 268 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 327
                 V P      +V    ++++ G  HPLL                P  + V+N+  
Sbjct: 291 GNRNKMVMP------NVVNARTVDLPGAWHPLL----------------PADTVVKNNIS 328

Query: 328 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 387
            +G                   +T+ V+ITGPNTGGKT ++KT GL  LM+++G+ +PA 
Sbjct: 329 FIG-------------------DTQTVIITGPNTGGKTVTLKTTGLIILMTQSGMMIPAA 369

Query: 388 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 447
               +  FD +  DIGD QS+EQ+LSTFS H++ IV IL+ ++  S V+ DE+G+GTDPS
Sbjct: 370 EGATISVFDEVFCDIGDEQSIEQSLSTFSSHMTNIVSILKEMTSNSFVMFDELGAGTDPS 429

Query: 448 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 507
           EG ALA SIL    ++  + + TTHY +L           NA+ EF +ETL PTYR+L G
Sbjct: 430 EGAALAMSILDRCLEQNVMTMATTHYPELKAYSYNRKHVMNASVEFDIETLSPTYRLLMG 489

Query: 508 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS-ELYQSLMEERRKLESQAR 566
             G SNA +IAK +G    II+ A+++++    E     KS E     ME+ R    Q +
Sbjct: 490 VPGKSNAFDIAKKLGLSPSIIKHARQMIQMDDVEIDNMIKSLESNAKQMEDDRIFTEQLK 549

Query: 567 -TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
               SLH+++   +     + ++L  RA        Q   + +  A+ + D +++   N 
Sbjct: 550 LEVQSLHSDLKKNFDSYLAQKENLIERAK-------QDANKIVKDAEKEADELLKTLRNL 602

Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 685
             +A   E N LI E  S +  +    +   D    + +T +   + G+ V V S G K 
Sbjct: 603 KSNADIKE-NELI-EKRSKLGEMYHETKIKAD----KKSTKNEVIEKGDHVKVLSYGQK- 655

Query: 686 ATVVEVPGDDDTVLVQYGKMRVRV-----------KKNNIRPIPNSKRK 723
             +++V G +   +VQ G +++++           K++  R +P S R+
Sbjct: 656 GVILDVDGKE--AIVQMGIIKMKLPLDELEKEAPPKEDKSRVVPRSNRQ 702


>gi|336431523|ref|ZP_08611372.1| hypothetical protein HMPREF0991_00491 [Lachnospiraceae bacterium
           2_1_58FAA]
 gi|336013825|gb|EGN43697.1| hypothetical protein HMPREF0991_00491 [Lachnospiraceae bacterium
           2_1_58FAA]
          Length = 791

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 183/570 (32%), Positives = 285/570 (50%), Gaps = 68/570 (11%)

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           P+IT R  R CV +KA ++  + +G+  + SS+G+T F+EP   V+ NN    L   E  
Sbjct: 186 PIITMRGDRYCVPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ L+ E A+   EI+     + ++D  FAR   A  M+   PIL++      D 
Sbjct: 245 EIQVILARLSEETAQYIEEIRTDYRILTDLDFIFARGALALSMNASRPILNT------DG 298

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
            I+I   +HPLL               +P K                     VPI + + 
Sbjct: 299 RIHIREGRHPLL---------------DPKKV--------------------VPITVSLG 323

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
            +  +++ITGPNTGGKT S+KT+GL +LM ++GL++PA++   L  F  + ADIGD QS+
Sbjct: 324 DDFSLLIITGPNTGGKTVSLKTVGLFTLMGQSGLHIPARDRSELAVFKQVYADIGDEQSI 383

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQ+LSTFS H++ IV  L  V   SLVL DE+G+GTDP+EG ALA +IL YL  R    +
Sbjct: 384 EQSLSTFSSHMTNIVSFLHDVDENSLVLFDELGAGTDPTEGAALAIAILSYLHGRGIRTM 443

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L          ENA  EF +E+LRPTYR+L G  G SNA  I+  +G    II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPDYII 503

Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
           + A     + R   Q     +L   L   +R +E +    A+   EI  L  + + + + 
Sbjct: 504 EDA-----KTRLSEQDVSFEDLISDLETSKRTIEKEQEEIAAYKKEIEALKSQAQQKQER 558

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD-ASADEINS-----LIKESE 642
           ++ +   + A+  ++    L  AK   D  +++F    ++  SA E+         K  E
Sbjct: 559 IEEQRERILAEAREKANTILRDAKDVADETIKNFRKFGKENISAAEMEKERERLRKKMKE 618

Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
           +  ++ ++  +P  ++  ++        + GE V V S+ +   T+  +P     V VQ 
Sbjct: 619 NTASSSLKVQKPKKEYKPTDF-------KLGESVKVLSM-NLTGTISSLPDSRGNVTVQM 670

Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANP-APR 731
           G +R +V  +++  I        ANP AP+
Sbjct: 671 GILRSQVHISDLEII------EEANPYAPK 694


>gi|227498526|ref|ZP_03928670.1| mutS2 family protein [Acidaminococcus sp. D21]
 gi|226903982|gb|EEH89900.1| mutS2 family protein [Acidaminococcus sp. D21]
          Length = 777

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 207/706 (29%), Positives = 339/706 (48%), Gaps = 83/706 (11%)

Query: 17  LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
            EE +    +T+ A+ ++ + + + L  I DI+G++     G LL P E  A++  +  +
Sbjct: 40  FEEVKLSQEETAEAVRILDEGRRIPLGGITDISGLVKRTRVGSLLDPEEFKAIQDAISGM 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
            ++   L E +E    +L RYS  L      +  + L +++   +D K   I D AS  L
Sbjct: 100 LDLKAFLKEVSE-TAPALVRYSDEL------HDFSRLSKQLSSVLDEKG-NIKDTASVKL 151

Query: 136 ELIRA----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
             +R      R R  + L  LL     Q +        L+T R  R  + IK  ++   P
Sbjct: 152 SGLRTGILVARNRVKDKLSDLLHDPNNQKY----FQDALVTMREDRYVIPIKQEYRLNFP 207

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
            GI  + SSSGAT F+EP   V  NN   +    E AE   IL  LT+ +      I   
Sbjct: 208 -GIVHDQSSSGATLFIEPMAVVNLNNDIKKYVLEEKAEVERILRTLTSHVGAEADHILES 266

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
           +  V ++DL  A+A +A+ +    P++    H+       ++G +HPLL   S+      
Sbjct: 267 LAVVAQVDLISAKALYAEALGARRPMMVLDHHLRI-----VKG-RHPLLEQESI------ 314

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
                                        VP+DI++  +   ++ITGPNTGGKT ++KT+
Sbjct: 315 -----------------------------VPLDIELGQDFTTLLITGPNTGGKTVALKTV 345

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
           GL +LM++AGL+LPA+     P F  + ADIGD QS+EQ+LSTFSGH+  ++ I+   + 
Sbjct: 346 GLFALMAQAGLFLPAEE-AIFPVFSGVYADIGDEQSIEQSLSTFSGHMKNMISIIREATD 404

Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
             LVL+DE+  GTDP+EG ALA +++++      L ++TTHY++L     +    +NA+ 
Sbjct: 405 RDLVLVDEVCVGTDPTEGAALAMAMIEHFYKAHVLTIMTTHYSELKTFAYEHEGMQNASV 464

Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-L 550
           EF  ETLRPTYR+L G  G SNA  I++ +G    I+  A+  +       ++H   E +
Sbjct: 465 EFDPETLRPTYRLLMGVPGSSNAFYISRRLGLPEDILDEARTFIN------ERHSNMERV 518

Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
            Q+L  ERR+ ES+     +L  E   L  +++ E   L++    +  K  +   +    
Sbjct: 519 LQNLEGERREYESRKDEIETLRRETEILRNQLKAEKTRLEKSRNDILRKAREDADELYRN 578

Query: 611 AKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS------ETN 664
           A+ +   ++++   Q     + ++  L + S  A++          +FS+S         
Sbjct: 579 ARRESQGILKELRAQQNLVESAKVERLAEMSRKALSK---------NFSISGRTEPEGQG 629

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
            +S     G+ V VK+LG +   +  V G D TV +   KM V +K
Sbjct: 630 LTSGNAAVGKVVFVKTLGQE-GKITAVNGRDVTVAIGVMKMNVSMK 674


>gi|422736468|ref|ZP_16792731.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX1341]
 gi|315166623|gb|EFU10640.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX1341]
          Length = 788

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 196/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                NP K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|256958895|ref|ZP_05563066.1| MutS 2 protein [Enterococcus faecalis DS5]
 gi|257078926|ref|ZP_05573287.1| MutS 2 protein [Enterococcus faecalis JH1]
 gi|294780084|ref|ZP_06745460.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis PC1.1]
 gi|307271106|ref|ZP_07552389.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX4248]
 gi|397699794|ref|YP_006537582.1| mutS2 protein [Enterococcus faecalis D32]
 gi|422708383|ref|ZP_16765911.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0027]
 gi|422718757|ref|ZP_16775408.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0017]
 gi|256949391|gb|EEU66023.1| MutS 2 protein [Enterococcus faecalis DS5]
 gi|256986956|gb|EEU74258.1| MutS 2 protein [Enterococcus faecalis JH1]
 gi|294452836|gb|EFG21262.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis PC1.1]
 gi|306512604|gb|EFM81253.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX4248]
 gi|315033806|gb|EFT45738.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0017]
 gi|315036891|gb|EFT48823.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0027]
 gi|397336433|gb|AFO44105.1| mutS2 protein [Enterococcus faecalis D32]
          Length = 788

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 196/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNVF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                NP K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|423650449|ref|ZP_17626019.1| MutS2 protein [Bacillus cereus VD169]
 gi|401281608|gb|EJR87514.1| MutS2 protein [Bacillus cereus VD169]
          Length = 786

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 212/724 (29%), Positives = 356/724 (49%), Gaps = 89/724 (12%)

Query: 15  KSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           K + E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+  
Sbjct: 41  KEIVEMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYG 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
             N+ + + + A+ +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+
Sbjct: 99  SRNMKRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASD 152

Query: 134 DLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L  IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +
Sbjct: 153 KLRGIRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGV 208

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
              GI  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     + 
Sbjct: 209 Y-GGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVL 267

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
             ++ V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+         
Sbjct: 268 SNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI--------- 312

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                 +P                    +  VP +I +  +   +VITGPNTGGKT ++K
Sbjct: 313 ------DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLK 346

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+G+  LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE  
Sbjct: 347 TVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKA 406

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
             ESLVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA
Sbjct: 407 DFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINA 466

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF + TL PTY++L G  G SNA  I+K +G   ++I++A+  +         ++   
Sbjct: 467 SVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHIST-----DTNKIEN 521

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQE 607
           +   L E ++  E     A +L  +   L+RE++ +  +   DR    LKA+  ++ +++
Sbjct: 522 MIAKLEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEK 579

Query: 608 LNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSE 662
           +  AK + + ++Q+   QLR A    +  + LI+     E A   +V+  +         
Sbjct: 580 VEAAKKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK--------- 629

Query: 663 TNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
            N  +  P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I 
Sbjct: 630 VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYIN 687

Query: 719 NSKR 722
             K+
Sbjct: 688 TPKQ 691


>gi|168704433|ref|ZP_02736710.1| recombination and DNA strand exchange inhibitor protein [Gemmata
           obscuriglobus UQM 2246]
          Length = 646

 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 183/582 (31%), Positives = 289/582 (49%), Gaps = 66/582 (11%)

Query: 22  KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           +L  +   AL + Q+ P   + + D+  +   A  G +L+  ++  V   L     +++ 
Sbjct: 48  QLTTEMVEALGLNQAPPF--AGLHDVRLVARRAQIGTMLTAEQLIEVAEALNCTGAMYRY 105

Query: 82  LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
               AE         S +++ L     L  + + IG CID +  + LD AS DL  +R  
Sbjct: 106 RMRLAE-------HLSGIIDHLSGIEDLGTVGKSIGGCIDGRGHV-LDMASRDLAAVR-- 155

Query: 142 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP---------D 192
                + L  L +KV A+I +   +  P + K  S     +   H Y+LP         +
Sbjct: 156 -----QKLFDLDEKVKAEIRRL--LRDPELRKILSYPNATVHGDH-YVLPVSVNHRHKVN 207

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           G+   VS +G T F+EP      +   V+L   E  E   +L  L++E+ K  + + Y +
Sbjct: 208 GVVHRVSGTGETVFIEPASIANLSAERVQLKADEDREVKRVLRRLSSEVGKVSKPLIYSL 267

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
           + + ++DL  ARA +A+  +   P ++++  +    +      +HPLL          A 
Sbjct: 268 EVIAKLDLITARARYARDFNMWPPDVNTEGKLWLRQA------RHPLL---------EAM 312

Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
             ++P+         +    SK  +   VPIDI++     ++VITGPNTGGKT ++KT G
Sbjct: 313 FRNDPVAEAPPPGSGSSAPSSKLKTRSVVPIDIRLGIGFNLLVITGPNTGGKTVTLKTTG 372

Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
           L  LM++ G+++PA     +P F  ILADIGD QSLEQ+LSTFS HI+RI  I ++    
Sbjct: 373 LLCLMAQCGMHIPAGEGSLVPVFRHILADIGDEQSLEQSLSTFSSHITRISSIFQVADEH 432

Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
           SL+L+DE+G+GTDP+EG AL  +IL  L    G A+VTTH  DL      + R EN A E
Sbjct: 433 SLILLDELGAGTDPTEGAALGRAILDQLDSVRGRAIVTTHLGDLKTYAFNNDRAENGAVE 492

Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER-------------LR 539
           F +ET+RPTYR+  G  G SNAL IA+ +   + ++++A K +++             LR
Sbjct: 493 FDIETMRPTYRLHIGQFGMSNALKIARRLKLPKDLLRKAHKYLKKRKGKSGELARLQELR 552

Query: 540 PERQQ---------HRKSELYQSLMEERRKLESQARTAASLH 572
            E +Q         H      + L  ER  L++QA   A+L+
Sbjct: 553 LEAEQAKVDALAARHEADREKEQLARERAALDNQAAERAALN 594


>gi|406665755|ref|ZP_11073526.1| MutS2 protein [Bacillus isronensis B3W22]
 gi|405386274|gb|EKB45702.1| MutS2 protein [Bacillus isronensis B3W22]
          Length = 788

 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 209/725 (28%), Positives = 349/725 (48%), Gaps = 84/725 (11%)

Query: 22  KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           +LL +    LA+++ +  + +  I D+      +  G +LSP E+  +  T+RA + + +
Sbjct: 46  ELLEEMDEGLAILRVKGNVPMGGIFDVRPHARRSQIGGMLSPMELMEIASTIRA-SRILR 104

Query: 81  KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR- 139
              E  +++ ++       +E  +    LT L+ +I  CID     +LD AS  L  IR 
Sbjct: 105 NFIE--DIESENTIEIPHFIERKEQMPVLTALQHEINDCIDDNG-TVLDSASPALRSIRQ 161

Query: 140 ---AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
              +E  +  + L+SL +   A    +  I    IT R  R  + +K  ++     GI  
Sbjct: 162 SLRSEESKVRQKLESLTRGSNATKMLSDAI----ITIRNDRFVIPVKQEYRSHY-GGIVH 216

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SG T F+EP   ++ NN   RL   E AE   ILS LT ++ +   EI  L+  + 
Sbjct: 217 DQSASGQTLFIEPDAVIQSNNEVQRLKVKEKAEIERILSELTLKVQEVGHEIFVLVQLLG 276

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           E+D+  A+  + Q      P ++ + +     +      +HPLL                
Sbjct: 277 EMDVILAKGKYGQANKCTMPKMNKEGYTRLVRA------RHPLL---------------- 314

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
           P++  V N+                   I+   +   +VITGPNTGGKT ++KT+GL ++
Sbjct: 315 PIEDAVANT-------------------IEFGRDVTAIVITGPNTGGKTVTLKTVGLCTI 355

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++ GL +PA +   L  F+ I ADIGD QS+EQ+LSTFS H+  IVDIL   + +SL+L
Sbjct: 356 MAQCGLPVPALDGSELAVFEQIFADIGDEQSIEQSLSTFSSHMVNIVDILSKFNEKSLIL 415

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA +IL    DR    + T+HY +L           NA+ EF +E
Sbjct: 416 FDELGAGTDPQEGAALAIAILDETVDRGARVMATSHYPELKAYGYNRPSVVNASVEFDIE 475

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TL PTYR+L G  G SNA  I+K +G    +I  A+      R     H    +  SL E
Sbjct: 476 TLSPTYRLLIGVPGRSNAFEISKRLGLSSNVIDHAKSFTGTDR-----HEVESMIASLEE 530

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
            R + E +A  A  L  +   +  E+E+  +  D +  +L+ K   + ++ ++ AK + +
Sbjct: 531 SRLRSEREADEAHLLLEDAQKIRAELEERLRIYDEKKENLEKKAKDKARKIVDDAKKEAE 590

Query: 617 TVVQDFENQLRDASADEINSLIKESESA-IAAIVEAHRPDDDFSVSETNTSSF----TPQ 671
           T++ +      +A+       +KE E   +   ++   P D+  V +   ++       Q
Sbjct: 591 TIIAELRKMKENAALS-----VKEHELIDVKKRLDNAAPIDNNKVLQKAVAARERKQNLQ 645

Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV-----------KKNNIRPIPNS 720
            G++V V S G K  T+++  G++   +VQ G +++++           K+   RP+ N 
Sbjct: 646 VGDEVKVLSYGQK-GTLLQKAGNE--WVVQIGILKMKLPESDLEYVKPEKEQATRPMMNV 702

Query: 721 KRKNA 725
           K +N+
Sbjct: 703 KNRNS 707


>gi|403070305|ref|ZP_10911637.1| DNA mismatch repair protein [Oceanobacillus sp. Ndiop]
          Length = 781

 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 227/730 (31%), Positives = 355/730 (48%), Gaps = 87/730 (11%)

Query: 7   QKAQIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
           Q +Q+     L E  +L  +T  A ++++  + + L  I DI   L  +  G +LS  E 
Sbjct: 30  QVSQLKPSTDLAEVIQLQQETDEAASIVRLDKAIPLGGITDIRESLKRSAIGGILSGEE- 88

Query: 66  CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
           C     L   N V+      A ++         L EL+     L ELE+ I  CID    
Sbjct: 89  C-----LDVANTVYGGRQVKAFIENLEEPELPVLEELVDRITPLRELEQHIKSCIDDHGH 143

Query: 126 IILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
           + +D AS  L  IR+       R  E L+S  +  ++ +  A      ++T R  R  + 
Sbjct: 144 M-MDSASAKLRSIRSSIRTYENRIREKLESYTRNNSSMLSDA------IVTIRNDRYVLP 196

Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
           +K  ++  +  GI  + SSSG T FMEPK  V+ NN      + E  E   IL  L+  I
Sbjct: 197 VKQEYRGTI-GGIVHDQSSSGQTLFMEPKAVVDLNNQLHEAISKEQQEIEQILKELSEHI 255

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
           A  ER++   +  + +ID  FARA     M    P ++ + ++    +      +HPL+ 
Sbjct: 256 ASFERDLYENVTVLGKIDFMFARAKLGNLMKASRPKINDRGYIKMQQA------RHPLI- 308

Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
                          P+   V N                   D+++      +VITGPNT
Sbjct: 309 ---------------PINEVVAN-------------------DVEIGKTYTSIVITGPNT 334

Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
           GGKT ++K +GL +LM+++GL +PA +   +  F+ + ADIGD QS+EQNLSTFS H++ 
Sbjct: 335 GGKTVTLKMIGLCTLMAQSGLQIPALDGCEMAVFEEVFADIGDEQSIEQNLSTFSSHMTN 394

Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
           IVDI++ V   SLVL DE+GSGTDP EG ALA SIL  +  R    + TTHY +L     
Sbjct: 395 IVDIIKKVDYRSLVLFDELGSGTDPQEGAALAMSILDEVVSREARVIATTHYPELKAYGY 454

Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
                 NA+ EF++ETL+PTYR+L G  G SNA  I+K +G D +II RA+ LV     +
Sbjct: 455 NRENVVNASVEFNVETLKPTYRLLIGVPGRSNAFEISKRLGLDEQIIDRAKGLV-GADSK 513

Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
             +   + L +S ++  R  E     A  +  E   L  EI  E K L+++   L  K  
Sbjct: 514 SVETMIASLEKSQLDAERDYEQ----AHEILLESEQLREEIMREWKQLEQKKETLYKKAE 569

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSV 660
           ++ ++ L+ A+ + + +V    N++R       N  +KE E   A  ++E  +P+    +
Sbjct: 570 EKAEKALSQAREEAELIV----NEIRQMKT---NVTLKEHEWIEAKKMLEEAQPN----L 618

Query: 661 SETNTSSFTPQFGEQVHVKSLGD--KLATVVEVPGD------DDTVLVQYGKMRVRVKKN 712
           S   +    P   E+ ++K  GD  KL TV +  G+      D+  +VQ G M+V+VK++
Sbjct: 619 SRKQSKQTEPVAKEKQNLKP-GDEIKLLTVNQ-KGEVLEKVSDNEYMVQVGIMKVKVKRS 676

Query: 713 NIRPIPNSKR 722
           +++ +   K+
Sbjct: 677 DLQLLGKQKQ 686


>gi|350267033|ref|YP_004878340.1| MutS2 family protein [Bacillus subtilis subsp. spizizenii TU-B-10]
 gi|349599920|gb|AEP87708.1| MutS2 family protein [Bacillus subtilis subsp. spizizenii TU-B-10]
          Length = 785

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 216/733 (29%), Positives = 361/733 (49%), Gaps = 81/733 (11%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           S++E +K L++   A A+++ +       + DI G L  A  G +LSPSE   +   L A
Sbjct: 39  SIDEIKKQLDEVDEASAIIRLRGQAPFGGLTDIRGALRRAEIGSVLSPSEFTEISGLLYA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
           V  +   +++ AE DG  +    PL++   +    L++LE  I  CID    + LD ASE
Sbjct: 99  VKQMKHFISQMAE-DGVDI----PLIQQHTEQLITLSDLERDINSCIDDHGEV-LDHASE 152

Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++  
Sbjct: 153 TLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
              GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT + A+   E+ 
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEQTAEHTEELF 267

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
             +  +  +D  FA+A +A+ +    PI++    V    +      +HPLL         
Sbjct: 268 QDLHVLQTLDFIFAKARYAKAVKATKPIMNDNGFVRLKKA------RHPLL--------- 312

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                  P    V N                   DI++  +   +VITGPNTGGKT ++K
Sbjct: 313 -------PPDQVVAN-------------------DIELGGDFSTIVITGPNTGGKTVTLK 346

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           TLGL +LM+++GL++PA        F+ + ADIGD QS+EQ+LSTFS H+  IV ILE V
Sbjct: 347 TLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILEQV 406

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
           +  SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA
Sbjct: 407 NENSLVLFDELGAGTDPQEGAALAMSILDDVHRTHARVLATTHYPELKAYGYNREGVMNA 466

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF +ETL PTY++L G  G SNA  I+K +G    II +A+  +       + +    
Sbjct: 467 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAKSEM-----TAEHNEVDT 521

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
           +  SL + +++ E +     S+  E   L++E++ +  +L+ +   +  +  QQ   ++ 
Sbjct: 522 MIASLEQSKKRAEEELSETESIRKEAEKLHKELQQQIIELNSKKDKMLEEAEQQAADKVK 581

Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETNTS 666
            A  + + ++ +  +   +  + + + LI   K  E A+    ++ +P+     ++T   
Sbjct: 582 AAMKEAEDIIHELRSIKEEHKSFKDHELINAKKRLEGAVPTFEKSKKPEK----TKTQKR 637

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
            F P  G++V V + G K  T++E  G ++   VQ G ++++VK+ ++  I ++      
Sbjct: 638 DFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN-VQIGILKMKVKEKDLEFIKSA------ 687

Query: 727 NPAPRLRKQVCTC 739
            P P+  K +   
Sbjct: 688 -PEPKKEKIITAV 699


>gi|336234407|ref|YP_004587023.1| MutS2 protein [Geobacillus thermoglucosidasius C56-YS93]
 gi|335361262|gb|AEH46942.1| MutS2 protein [Geobacillus thermoglucosidasius C56-YS93]
          Length = 784

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 211/715 (29%), Positives = 343/715 (47%), Gaps = 85/715 (11%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           Q+  ++ +AAL +    PL    I DI   L     G  LSP E+  +  T+ A     +
Sbjct: 47  QEETDEAAAALRLRGHVPL--GGIVDIRASLKRVKIGGTLSPHELLDISSTISAS----R 100

Query: 81  KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
           +L +  E   +  + +  L    +    L E+++ I  CID    + LD ASE L  IR 
Sbjct: 101 QLKQFIESLHEEKEEFPHLAGYAEKLVALPEVQQAIERCIDDHGEV-LDHASERLRSIRQ 159

Query: 141 ERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
           + +    R  E L+S+++  +AQ      +   +IT R  R  + +K  ++     GI  
Sbjct: 160 QLRTTEARVREKLESIIRSPSAQKM----LSDAIITIRNDRYVIPVKQEYRGAY-GGIVH 214

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP+  VE NN        E  E   IL+ LT  +A     +   +  + 
Sbjct: 215 DQSASGATLFIEPQAVVELNNQLQEARVKEKREIERILTELTGIVAGHAEALLENVGILA 274

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           ++D  FA+A +A  +    P L+ + ++    +      +HPL+   ++           
Sbjct: 275 QLDFIFAKAKYANKLKATKPALNDRGYIRLLQA------RHPLIDQEAV----------- 317

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                                   VP DI++  E   +VITGPNTGGKT ++KT+GL +L
Sbjct: 318 ------------------------VPNDIELGKEYTTIVITGPNTGGKTVTLKTIGLLTL 353

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++AGL++PA +   L  F  I ADIGD QS+EQ+LSTFS H+  IV+IL  V  ESLVL
Sbjct: 354 MAQAGLFIPALDGSELAVFRSIYADIGDEQSIEQSLSTFSSHMVNIVEILRDVDHESLVL 413

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA +IL  +  R    V TTHY +L           NA+ EF  E
Sbjct: 414 FDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRDGVINASVEFDTE 473

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TLRPTY++L G  G SNA  I+K +G   +II+RA     +L    + +    +  SL +
Sbjct: 474 TLRPTYKLLIGIPGRSNAFEISKRLGLAERIIERA-----KLHISAESNNVENMIASLEQ 528

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
            +++ E + + A     E   L R+ E + ++L  +   +  +  ++    +  ++ + +
Sbjct: 529 SKKRAEEELKKAEEARMEAEQLRRDWEQKWEELHEKREEIIEEAKRKAADIVRSSQQKAE 588

Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD---------FSVSETNTSS 667
            ++ +     ++  A+     IKE E     ++EA +   +             +  T S
Sbjct: 589 RIIHELRRMQQEKQAE-----IKEHE-----LIEAKKRLQEAMPTLEKKKKERKKQATHS 638

Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           F P  G++V V SL  K   V +V   DD   VQ G +++++ + ++  I ++ +
Sbjct: 639 FQP--GDEVKVISLNQKGYLVEKV--SDDEWQVQLGILKMKINERDLEYIGSAPK 689


>gi|335038522|ref|ZP_08531758.1| MutS2 protein [Caldalkalibacillus thermarum TA2.A1]
 gi|334181583|gb|EGL84112.1| MutS2 protein [Caldalkalibacillus thermarum TA2.A1]
          Length = 787

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 215/708 (30%), Positives = 353/708 (49%), Gaps = 97/708 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKL-TEAAELDGDSLQRY 96
              I DI   +  A+ G  L  +E+  V +T+   R + +  +K+  E  EL        
Sbjct: 65  FGGIRDIRPAVKRAMIGSRLDAAELLDVAQTIAGGRKLKHFLEKVCAEHGEL-------- 116

Query: 97  SPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 156
           S L  L +    L ++E+ I  CID +   +LD AS  L+ IR  R R+ E     +K+ 
Sbjct: 117 SILARLEEQIRPLRDVEQSIKSCID-EHGDVLDSASPALKEIR-NRIRHAEQR---VKRQ 171

Query: 157 AAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
             QI +A      + +P+IT R+ R C+ +KA +++    G+  + S+SGAT F+EP+  
Sbjct: 172 LEQIVRAPANQKMLQEPIITIRQDRYCIPVKAEYRHHF-GGLVHDQSASGATLFVEPEAV 230

Query: 213 VEFNNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 269
           V  NN    L  +++ EE  I   L+ LT ++ ++  ++K  +  + E+D  FA+A +A+
Sbjct: 231 VAINN---ELREAKLQEEKEIDRILTGLTRQVGEAGEDLKNNVQALAELDFLFAKAYYAR 287

Query: 270 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
            +  V P L+ Q +     +      +HPL+    +                        
Sbjct: 288 SIRAVQPQLNDQGYFKLIRA------RHPLIPAQDV------------------------ 317

Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
                      VP   ++  E   +VITGPNTGGKT ++KTLGL +LM+ +GL++PA+  
Sbjct: 318 -----------VPTTFELGGEYTCMVITGPNTGGKTVTLKTLGLLTLMACSGLFIPAEEG 366

Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 449
             +     + ADIGD QS+EQ+LSTFS H++ IVDILE +   SL+L DE+G+GTDP+EG
Sbjct: 367 SHVAVVSGVYADIGDEQSIEQSLSTFSSHMTHIVDILEKMDENSLLLFDELGAGTDPTEG 426

Query: 450 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
            ALA +IL ++  R  L V TTHY++L           NA+ EF  ETL+PTYR+L G  
Sbjct: 427 AALAMAILDFVHSRGALVVATTHYSELKAYAYSRPGVINASVEFDTETLKPTYRLLVGVP 486

Query: 510 GDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQART 567
           G SNA +IA+ +G   +II+ A+  +  + LR +   H  +EL  +    R++ E   + 
Sbjct: 487 GRSNAFHIARRLGLKEEIIETAKNQISTDDLRID---HMLAELESA----RKQAEEDRQA 539

Query: 568 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 627
           A  L  E+  L + +  +   L++    L ++  QQ +Q++     + + ++       R
Sbjct: 540 AERLKREVEALKQSLAKKEAQLEKEKERLISQAKQQAEQKIERMMKEAERIMAQLREWQR 599

Query: 628 DASADEINSLI---------KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHV 678
              A + + LI         KE+ S   A ++  RP         N  +F P  G+ V+V
Sbjct: 600 GHQAVKEHQLIEAKKGLKQLKEAASQQPAGMDKPRP------KRQNGQTFKP--GDDVYV 651

Query: 679 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
            + G K   V+E   + +   VQ G ++++VK +++  I   + + A 
Sbjct: 652 HTFGQK-GQVIEKLSEQE-YYVQLGIIKMKVKASDMEKIKTKQTEQAG 697


>gi|407477852|ref|YP_006791729.1| MutS2 protein [Exiguobacterium antarcticum B7]
 gi|407061931|gb|AFS71121.1| MutS2 protein [Exiguobacterium antarcticum B7]
          Length = 788

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 216/698 (30%), Positives = 332/698 (47%), Gaps = 100/698 (14%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
           D+   +  A  G +LS SE+ AV   + +   V K   E    D   L R   L   +  
Sbjct: 70  DVRSEVKRAEIGSVLSTSELLAVADVVYSGRQV-KAFQERLHEDHPDL-RLPALDSRIDQ 127

Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQI 160
              L E+E+ I   ID +   + D AS+ L  +R++  R++E      +D +L+  +  +
Sbjct: 128 ITKLVEIEQGIRHAIDDQG-TVQDSASDKLRALRSQL-RSLEGQVRSKIDGVLRSKSKML 185

Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN--M 218
             A      ++T R  R CV +K  ++     GI  + S+SGAT F+EP+  V  NN   
Sbjct: 186 SDA------IVTMRNDRYCVPVKQEYRQAF-GGIVHDQSASGATLFIEPQAVVAANNEIQ 238

Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
           E RL   E AE   IL+ L+A +      ++  +D + E+D   A+A +   +  V P L
Sbjct: 239 EARLK--ERAEIERILAQLSALVGSVGDSLRINVDVLAELDFIMAKALYGHTIRAVEPKL 296

Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
           +   H+    +      +HP +                P                    D
Sbjct: 297 NENRHIVLKEA------RHPFI----------------P-------------------DD 315

Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
             VPI + +  E   +VITGPNTGGKT ++KT+GL  LM ++GLY+PA +   L  FD I
Sbjct: 316 EVVPITVSLGGEFTSLVITGPNTGGKTVTLKTIGLLQLMVQSGLYVPAADETELSVFDAI 375

Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
            ADIGD QS+EQNLSTFS H++ IV ++  +   SLVL DE+G+GTDP+EG ALA +IL 
Sbjct: 376 YADIGDEQSIEQNLSTFSSHMTNIVSMMGKIDFMSLVLFDELGAGTDPTEGAALAIAILD 435

Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
            ++ R      TTHY++L           NA+ EF +E+L PTYR+L G  G SNA  I+
Sbjct: 436 EVKRRGARVAATTHYSELKAYGYNREGVVNASMEFDVESLSPTYRLLIGVPGRSNAFEIS 495

Query: 519 KSIGFDRKII-----------QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 567
           K +G D ++I           Q  + ++ RL  E  + R   L + L++E+++L  +   
Sbjct: 496 KRLGLDDRVISAARDQVGSDAQSVETMIGRL--EEAKQRAETLERELLQEQKRLVQEREE 553

Query: 568 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 627
                AEI     EI  +A++   RA     KE + V + L                +LR
Sbjct: 554 FEQEQAEIHQEKNEILAKAEEKATRAVERAQKEAEAVIKRL---------------KELR 598

Query: 628 DASADEINSLIKESESAIAAIVEAHRPD-DDFSVSETNT-SSFTPQF--GEQVHVKSLGD 683
           DA A + + LI+  +      +E  +P   D  +++    S+ TP F  GE+V V +   
Sbjct: 599 DAGAVKEHELIEARKQ-----LEQAKPSLQDQRIAKVKAKSNQTPVFAKGEEVKVTTFNQ 653

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           K   + +    + T  VQ G M+V VK +++  +   K
Sbjct: 654 KGYIINQNSNGEYT--VQVGIMKVNVKPSDLAKVGEVK 689


>gi|429766788|ref|ZP_19299030.1| MutS2 family protein [Clostridium celatum DSM 1785]
 gi|429182934|gb|EKY24010.1| MutS2 family protein [Clostridium celatum DSM 1785]
          Length = 785

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 215/713 (30%), Positives = 346/713 (48%), Gaps = 74/713 (10%)

Query: 12  PFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
           P+ KS+ E +K L +T+ AL ++  +  P     + D    +  A  G +L+P ++  + 
Sbjct: 36  PY-KSIYEVEKKLEETNEALDILIRKGTP-PFEGLHDTRAEIARAAKGGVLTPGQLIKIG 93

Query: 70  RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
             LR      + +    E  G     Y  L +L      L  LE +I   I  +  I  D
Sbjct: 94  SMLRCSRRFKEYVVRKEEEIG-----YKHLEDLAYILVPLKGLESEIDNAIISEEEIS-D 147

Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHK 187
           +AS  L  IR    R+++  +S +++    I +A    +   L T R  R  + +KA +K
Sbjct: 148 KASGTLYNIR----RSLKEKNSSVREKINSIVRANSKYLQDSLYTMRGDRYVIPVKAEYK 203

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +P G+  + SS+GAT F+EP   V  NN    L   E AE   ILS L++++  +   
Sbjct: 204 GAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILSELSSKVYNNIDV 262

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           +    + + E+D  FA+  +A  ++ + P       +  D S +I G KHPL+       
Sbjct: 263 VTSNSNILKELDFIFAKGKYASSLNAILP------KIRNDKSFDIIGGKHPLI------- 309

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                                            VP D+ +  E   ++ITGPNTGGKT +
Sbjct: 310 ----------------------------DQKIVVPSDVYLGDEFTTLMITGPNTGGKTVT 341

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL  LM+ +GL +PAK+   + ++  I ADIGD QS+EQ+LSTFSGH++ IV IL+
Sbjct: 342 LKTVGLLHLMALSGLLIPAKDGSSVGFYKEIFADIGDEQSIEQSLSTFSGHMTNIVTILD 401

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
               +SLVL DE+GSGTDP+EG ALA +I++ LRDR    + TTHY++L     +    E
Sbjct: 402 DADGDSLVLFDELGSGTDPAEGSALAIAIIETLRDRGARIIATTHYSELKGYALRTIGVE 461

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE---R 542
           NA+ EF +ETLRPTYR+L G  G SNA  I++ +G    +I++A+  +  E L+ E   R
Sbjct: 462 NASVEFDVETLRPTYRLLIGIPGKSNAFEISRRLGLSNDVIEKAKNSMSKENLQFEDLIR 521

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
               KS L      E +KL  +A    + + E ++   +I D+A +     A L+AK   
Sbjct: 522 DLQEKSILANRDAREAKKLRDEAENLKNKYNEKINKLDKIRDKAYE----EARLEAKNI- 576

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
                ++ AK + D +V+      +   A+   + +++    + A +E        +   
Sbjct: 577 -----ISKAKDEADEIVKAMRELEKMGIAEGGRNRLEQERQKLKASLEEKEAAMIKTREN 631

Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
                   Q G +  + SL  ++  +V  P +   V V+ G M++ VK  ++R
Sbjct: 632 QGEIIKKVQLGMEAFLPSLNQRV-IIVSNPDNKGEVQVEAGIMKINVKLKDLR 683


>gi|260887326|ref|ZP_05898589.1| DNA mismatch repair protein MutS [Selenomonas sputigena ATCC 35185]
 gi|330838921|ref|YP_004413501.1| MutS2 family protein [Selenomonas sputigena ATCC 35185]
 gi|260862962|gb|EEX77462.1| DNA mismatch repair protein MutS [Selenomonas sputigena ATCC 35185]
 gi|329746685|gb|AEC00042.1| MutS2 family protein [Selenomonas sputigena ATCC 35185]
          Length = 791

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 212/731 (29%), Positives = 352/731 (48%), Gaps = 82/731 (11%)

Query: 8   KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           +A +P G    E ++LL +T  A+ +       +  + DI   L  A  G +L   +   
Sbjct: 32  RAVLPSG-DFAEVEELLRETEEAVRLSAFSSPPMGGVFDIRESLAKAERGAVLDLGDFTD 90

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
           +  T+RA+  V K+  +  E+D        PL+ E  K    L +LE ++   +D +   
Sbjct: 91  LLSTMRAMRAV-KRFFKEVEMD-------LPLIKEQAKGIEILGQLERRLENSVD-EHGN 141

Query: 127 ILDRASEDLELIRAERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           +LD AS +L  IR E +       E ++++L +   Q F        +IT+R  R  + I
Sbjct: 142 LLDDASVELSRIRRELRSGRRRAKEQMEAILHRTEYQKF----FQDAIITQRAERNVIPI 197

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           K  ++   P GI  + S+SGAT F+EP   V+ NN   +L+ +E  E   IL LL+ E+ 
Sbjct: 198 KQEYRQSFP-GIVHDQSASGATLFIEPMALVDLNNDLKQLALAEKTEVQRILRLLSQEVG 256

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           K+   ++     +  +D  FARA  A  M    P ++ +      ++      +HPL+  
Sbjct: 257 KNGSVLEGNCAILASLDFIFARAKLAADMQAKRPAINREGRTKLVAA------RHPLIDA 310

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
           + +                                   VPIDI +    R+++ITGPNTG
Sbjct: 311 AKV-----------------------------------VPIDIALGEAYRMLLITGPNTG 335

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT S+KT+GL +LM ++G Y+PA     +  +  +   IGD QS+EQ+LSTFS H+S +
Sbjct: 336 GKTVSLKTIGLFALMVQSGCYIPAAAGSEISVYTNVYTVIGDEQSIEQSLSTFSAHMSHL 395

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V +LE V    L+L+DEIG+GTDP EG ALA +IL+    R    +VTTHY++L      
Sbjct: 396 VKLLECVEGTDLLLLDEIGAGTDPEEGAALAMAILEQFLARGSSTIVTTHYSELKTFAFT 455

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
               ENA  EF +ETLRPTYR+L G  G SNA  I++ +G     I RAQ+ ++    + 
Sbjct: 456 REGIENACVEFDVETLRPTYRLLTGMPGASNAFAISRRLGLSEAAILRAQQFIKADHAQF 515

Query: 543 QQHRKSELYQSLMEERRK---LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
           ++       + LM E+R    +E Q R  A L  +   L  EI ++ + + ++A    A 
Sbjct: 516 EKVVNQLESEKLMYEQRNADIMERQQRV-AKLEEKTQALKDEIREKKEQMLKKARQESAN 574

Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR----PD 655
             ++ ++E        + +++  + Q  D   +     ++E+   +    E  R    P 
Sbjct: 575 LVRRTRRE-------AEEIIKSLKAQFDDLGIESRRRAMQEAREKLQEAAERSRTGLLPG 627

Query: 656 DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
             +   + +        G+ V+V+ L D+ ATV+++ G +  + VQ G ++  VK  + R
Sbjct: 628 KAYK-EKIDMQKLA--VGDVVYVRKL-DQKATVLKIQGAN--IEVQLGSLKTYVKAGDCR 681

Query: 716 PIPNSKRKNAA 726
            +  ++++  A
Sbjct: 682 FVERARKEQPA 692


>gi|385265748|ref|ZP_10043835.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. 5B6]
 gi|385150244|gb|EIF14181.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. 5B6]
          Length = 785

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 212/722 (29%), Positives = 357/722 (49%), Gaps = 79/722 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L + QK L++   A A+M+ +       + DI   L  A  G +L+P+E   +   L AV
Sbjct: 40  LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             +   +++  E DG  +    PL++   +    L +LE +I  CID    + LD AS  
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153

Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++   
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT   A+  +EI +
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAH 268

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            ++ +  +D  FA+A +A+ M    P+++       D  I ++  +HPLL          
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P    V N                   DI++  +   +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL ++M++AGL++PA        FD + ADIGD QS+EQ+LSTFS H+  IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEASVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETL PTY++L G  G SNA  I++ +G    II +A+  +        +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521

Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
              SL + +++ + +     S+  E   L++E++ +  +L+ +   +  +  Q+  ++L 
Sbjct: 522 MIASLEKSKKRADEELSETESIRKEAEKLHKELQQQIIELNDQKDKMMEEAEQKAAEKLE 581

Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            A  + + ++++    + + R     E+    K    A+ A  ++ +P+           
Sbjct: 582 AAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTE----KKR 637

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN---IRPIPNSKRK 723
              P  G++V V + G K A ++E  G+ +   VQ G ++++VK+ +   ++  P  K++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSAPEPKKE 693

Query: 724 NA 725
            A
Sbjct: 694 KA 695


>gi|29375971|ref|NP_815125.1| MutS2 family protein [Enterococcus faecalis V583]
 gi|227518669|ref|ZP_03948718.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
           TX0104]
 gi|227553200|ref|ZP_03983249.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
           HH22]
 gi|422715235|ref|ZP_16771958.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0309A]
 gi|422716036|ref|ZP_16772752.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0309B]
 gi|424676844|ref|ZP_18113715.1| MutS2 family protein [Enterococcus faecalis ERV103]
 gi|424681338|ref|ZP_18118125.1| MutS2 family protein [Enterococcus faecalis ERV116]
 gi|424683526|ref|ZP_18120276.1| MutS2 family protein [Enterococcus faecalis ERV129]
 gi|424686569|ref|ZP_18123237.1| MutS2 family protein [Enterococcus faecalis ERV25]
 gi|424690157|ref|ZP_18126692.1| MutS2 family protein [Enterococcus faecalis ERV31]
 gi|424695180|ref|ZP_18131563.1| MutS2 family protein [Enterococcus faecalis ERV37]
 gi|424697010|ref|ZP_18133351.1| MutS2 family protein [Enterococcus faecalis ERV41]
 gi|424699605|ref|ZP_18135816.1| MutS2 family protein [Enterococcus faecalis ERV62]
 gi|424703382|ref|ZP_18139516.1| MutS2 family protein [Enterococcus faecalis ERV63]
 gi|424706073|ref|ZP_18142086.1| MutS2 family protein [Enterococcus faecalis ERV65]
 gi|424717217|ref|ZP_18146515.1| MutS2 family protein [Enterococcus faecalis ERV68]
 gi|424720798|ref|ZP_18149899.1| MutS2 family protein [Enterococcus faecalis ERV72]
 gi|424724349|ref|ZP_18153298.1| MutS2 family protein [Enterococcus faecalis ERV73]
 gi|424733935|ref|ZP_18162490.1| MutS2 family protein [Enterococcus faecalis ERV81]
 gi|424743762|ref|ZP_18172067.1| MutS2 family protein [Enterococcus faecalis ERV85]
 gi|424749463|ref|ZP_18177566.1| MutS2 family protein [Enterococcus faecalis ERV93]
 gi|81722394|sp|Q835H3.1|MUTS2_ENTFA RecName: Full=MutS2 protein
 gi|29343433|gb|AAO81195.1| MutS2 family protein [Enterococcus faecalis V583]
 gi|227073849|gb|EEI11812.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
           TX0104]
 gi|227177673|gb|EEI58645.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
           HH22]
 gi|315575541|gb|EFU87732.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0309B]
 gi|315580018|gb|EFU92209.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0309A]
 gi|402351045|gb|EJU85937.1| MutS2 family protein [Enterococcus faecalis ERV116]
 gi|402356464|gb|EJU91198.1| MutS2 family protein [Enterococcus faecalis ERV103]
 gi|402364524|gb|EJU98959.1| MutS2 family protein [Enterococcus faecalis ERV129]
 gi|402364844|gb|EJU99275.1| MutS2 family protein [Enterococcus faecalis ERV31]
 gi|402367423|gb|EJV01764.1| MutS2 family protein [Enterococcus faecalis ERV25]
 gi|402368722|gb|EJV03029.1| MutS2 family protein [Enterococcus faecalis ERV37]
 gi|402375534|gb|EJV09514.1| MutS2 family protein [Enterococcus faecalis ERV62]
 gi|402377339|gb|EJV11250.1| MutS2 family protein [Enterococcus faecalis ERV41]
 gi|402385387|gb|EJV18927.1| MutS2 family protein [Enterococcus faecalis ERV63]
 gi|402386565|gb|EJV20071.1| MutS2 family protein [Enterococcus faecalis ERV68]
 gi|402388716|gb|EJV22144.1| MutS2 family protein [Enterococcus faecalis ERV65]
 gi|402390945|gb|EJV24265.1| MutS2 family protein [Enterococcus faecalis ERV81]
 gi|402393269|gb|EJV26499.1| MutS2 family protein [Enterococcus faecalis ERV72]
 gi|402395332|gb|EJV28441.1| MutS2 family protein [Enterococcus faecalis ERV73]
 gi|402399891|gb|EJV32745.1| MutS2 family protein [Enterococcus faecalis ERV85]
 gi|402407714|gb|EJV40219.1| MutS2 family protein [Enterococcus faecalis ERV93]
          Length = 788

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 196/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                NP K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|339448753|ref|ZP_08652309.1| MutS2 protein [Lactobacillus fructivorans KCTC 3543]
          Length = 785

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 208/679 (30%), Positives = 335/679 (49%), Gaps = 70/679 (10%)

Query: 60  LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
           L+ +E+  V   L A   V    T  A LD D ++  + L +  K+ N L E+ +++   
Sbjct: 84  LNGTELSQVNAVLLASKRVR---TFFANLDDDKVE-LNVLYDEAKDFNDLPEISKRLQAS 139

Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
           ID    + LD AS +L  IR E  R   N+ + + K      Q+  + +P+IT R  R  
Sbjct: 140 IDEDGRV-LDSASSELRSIRREITRLETNIKTTMNKYI-HGKQSKYLSEPIITVRDGRYV 197

Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
           + +K+  K     GI  + S+SG T ++EP+  V  NN   R    E  E   ILS L+ 
Sbjct: 198 IPVKSEDKQKF-GGIVHDQSTSGLTLYIEPQSVVSSNNDLRRSQLDERKEIHKILSELSD 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
            I   + E+     ++   DL  A+A FA  M    P +S ++HV      N++ ++HPL
Sbjct: 257 MIRPYQEELMENAAQLGHFDLINAKAKFADQMHATKPSVSKENHV------NLKNVRHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + +  VG+            DI++  + R ++ITGP
Sbjct: 311 I-----------------------DQKKVVGN------------DIQIGSDFRQIIITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLG+  LM+++G+++ A    ++  FD + ADIGD QS+E NLSTFS H+
Sbjct: 336 NTGGKTITIKTLGINQLMAQSGIFVMANEGSQVGVFDNVFADIGDEQSIEANLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
             +++IL+ ++ +SL+LIDE+G+GTDP EG ALA SIL  + +     + TTHY +L   
Sbjct: 396 DNLINILKHITNQSLILIDELGAGTDPKEGAALAMSILDKMGESGSEVLATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
                   N++ EF  +TL+PTYR+L G  G SNALNIAK +G    II  A  L++   
Sbjct: 456 GYNRPETINSSMEFDEKTLKPTYRLLLGVPGQSNALNIAKRLGLPDTIISEASSLMDSDS 515

Query: 540 PE--RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE----AKDLDRRA 593
            +  R   + ++  +   E  RKL+ +      LHA++ D   +  D       D  R+A
Sbjct: 516 QDINRMIKQLTKQTKDADERARKLKVELAENERLHADLNDKLTKFTDNKDSMVNDAKRQA 575

Query: 594 AHLKAKETQQVQQEL-NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH 652
             + +K  +Q  + + N  +VQ  T     EN+L DA   +INSL +  E     +++  
Sbjct: 576 NQIVSKTRRQANEIINNLHQVQKRTNQPIKENELIDAKG-KINSLEQHPELKNNRVLKRE 634

Query: 653 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
           +    F            + G+ V VKS G +   +++  G D+   VQ G ++++V ++
Sbjct: 635 KAKHHF------------KEGDDVLVKSYGQR-GVLLKKMGKDNWE-VQLGILKMKVSES 680

Query: 713 NIRPIPNSKRKNAANPAPR 731
           ++        K    P+ R
Sbjct: 681 DLEQTHKEPGKKKHTPSVR 699


>gi|423521564|ref|ZP_17498037.1| MutS2 protein [Bacillus cereus HuA4-10]
 gi|401177766|gb|EJQ84953.1| MutS2 protein [Bacillus cereus HuA4-10]
          Length = 786

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 213/700 (30%), Positives = 344/700 (49%), Gaps = 91/700 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + + AE +G  L    P+L
Sbjct: 65  LGGISDIRSNVKRAKIGSMLSPHELIEIASTMYGSRQMKRFIEDMAE-NGVEL----PIL 119

Query: 101 E-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 EGHVAQIISLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
           NN   E R+   +  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +  
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291

Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
             PI++++ ++    +      +HPL+               +P                
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314

Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
               +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   + 
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370

Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
            F  I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430

Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
            SIL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490

Query: 514 ALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
           A  I+K +G   ++I RA+  +  +  + E    +  E  +S   ER++ E   + +  L
Sbjct: 491 AFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKSAEHERKEAEEHRKQSEKL 550

Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
           H E+     E  DE     R    LKA+  ++ ++++  AK + + ++ +   QLR A  
Sbjct: 551 HRELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQL 602

Query: 632 DEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLG 682
             +  + LI+     E A   +V+  +          N  +  P+     G++V V + G
Sbjct: 603 VNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFG 653

Query: 683 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 654 QKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|352684296|ref|YP_004896281.1| mutS2 family protein [Acidaminococcus intestini RyC-MR95]
 gi|350278951|gb|AEQ22141.1| mutS2 family protein [Acidaminococcus intestini RyC-MR95]
          Length = 790

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 207/706 (29%), Positives = 339/706 (48%), Gaps = 83/706 (11%)

Query: 17  LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
            EE +    +T+ A+ ++ + + + L  I DI+G++     G LL P E  A++  +  +
Sbjct: 40  FEEVKLSQEETAEAVRILDEGRRIPLGGITDISGLVKRTRVGSLLDPEEFKAIQDAISGM 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
            ++   L E +E    +L RYS  L      +  + L +++   +D K   I D AS  L
Sbjct: 100 LDLKAFLKEVSE-TAPALVRYSDEL------HDFSRLSKQLSSVLDEKG-NIKDTASVKL 151

Query: 136 ELIRA----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
             +R      R R  + L  LL     Q +        L+T R  R  + IK  ++   P
Sbjct: 152 SGLRTGILVARNRVKDKLSDLLHDPNNQKY----FQDALVTMREDRYVIPIKQEYRLNFP 207

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
            GI  + SSSGAT F+EP   V  NN   +    E AE   IL  LT+ +      I   
Sbjct: 208 -GIVHDQSSSGATLFIEPMAVVNLNNDIKKYVLEEKAEVERILRTLTSHVGAEADHILES 266

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
           +  V ++DL  A+A +A+ +    P++    H+       ++G +HPLL   S+      
Sbjct: 267 LAVVAQVDLISAKALYAEALGARRPMMVLDHHLRI-----VKG-RHPLLEQESI------ 314

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
                                        VP+DI++  +   ++ITGPNTGGKT ++KT+
Sbjct: 315 -----------------------------VPLDIELGQDFTTLLITGPNTGGKTVALKTV 345

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
           GL +LM++AGL+LPA+     P F  + ADIGD QS+EQ+LSTFSGH+  ++ I+   + 
Sbjct: 346 GLFALMAQAGLFLPAEE-AIFPVFSGVYADIGDEQSIEQSLSTFSGHMKNMISIIREATD 404

Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
             LVL+DE+  GTDP+EG ALA +++++      L ++TTHY++L     +    +NA+ 
Sbjct: 405 RDLVLVDEVCVGTDPTEGAALAMAMIEHFYKAHVLTIMTTHYSELKTFAYEHEGMQNASV 464

Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-L 550
           EF  ETLRPTYR+L G  G SNA  I++ +G    I+  A+  +       ++H   E +
Sbjct: 465 EFDPETLRPTYRLLMGVPGSSNAFYISRRLGLPEDILDEARTFIN------ERHSNMERV 518

Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
            Q+L  ERR+ ES+     +L  E   L  +++ E   L++    +  K  +   +    
Sbjct: 519 LQNLEGERREYESRKDEIETLRRETEILRNQLKAEKTRLEKSRNDILRKAREDADELYRN 578

Query: 611 AKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS------ETN 664
           A+ +   ++++   Q     + ++  L + S  A++          +FS+S         
Sbjct: 579 ARRESQGILKELRAQQNLVESAKVERLAEMSRKALSK---------NFSISGRTEPEGQG 629

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
            +S     G+ V VK+LG +   +  V G D TV +   KM V +K
Sbjct: 630 LTSGNAAVGKVVFVKTLGQE-GKITAVNGRDVTVAIGVMKMNVSMK 674


>gi|295090651|emb|CBK76758.1| MutS2 family protein [Clostridium cf. saccharolyticum K10]
          Length = 816

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 217/713 (30%), Positives = 338/713 (47%), Gaps = 82/713 (11%)

Query: 16  SLEESQKLLNQ---TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           S + S+ + NQ   T A   + Q   L    ++DI   L     G  L+  E+ AV   L
Sbjct: 37  SCDYSEIVQNQQETTDAVTRVRQKGSLSFGGVKDITDSLKRLEIGSSLNIMELLAVSSVL 96

Query: 73  R-AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
             A         E +EL  DSL     LLE L   N  TE++     CI  +  +  D A
Sbjct: 97  TVAARAKSYGRREESELPDDSLDEMFRLLEPLTPVN--TEIKR----CILSEDEVS-DDA 149

Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
           S  L  +R + K    R    L+S+L      +  A      +IT R  R C+ +KA HK
Sbjct: 150 SPGLRQVRRQMKVINDRIHTQLNSVLNSSRTYLQDA------VITMRDGRYCLPVKAEHK 203

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +P G+  + S++G+T F+EP   +  NN    L   E  E   +L  L++++      
Sbjct: 204 NQVP-GMVHDQSATGSTVFIEPMAVIRLNNEMRELEIQEKREIEFVLMALSSQLVPYTET 262

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           +   +  +  +D  FA+A  ++  +   P  +++ +      INI+  +HPLL       
Sbjct: 263 LAENLSILARLDFIFAKASLSRHFNCTEPKFNNRRY------INIKDGRHPLL------- 309

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                   +P K                     VPI+I +     ++++TGPNTGGKT S
Sbjct: 310 --------DPKKV--------------------VPINIYLGDSFDLLIVTGPNTGGKTVS 341

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL +LM +AGL++PA +   L  FD + ADIGD QS+EQ+LSTFS H++ IV IL 
Sbjct: 342 LKTVGLFTLMGQAGLHIPAFDGSELAVFDNVFADIGDEQSIEQSLSTFSAHMTNIVSILN 401

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
                SL L DE+G+GTDP+EG ALA ++L +L +     + TTHY++L      +   E
Sbjct: 402 EADSNSLCLFDELGAGTDPTEGAALAVAVLTFLHNMQCRTMATTHYSELKVFALTEPGVE 461

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NA  EFS+ETLRPTYR+L G  G SNA  I+K +G    II+ A++ +     E++    
Sbjct: 462 NACCEFSVETLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIEDAKRHI-----EKEDAAF 516

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
            +L  +L E R  +E +    ++  AEI  L + +  + +    +   L  K  ++ Q+ 
Sbjct: 517 EDLLANLEESRITIEKEREELSAYKAEIAQLKQRLTQKEERFQDQKERLLEKAREEAQKI 576

Query: 608 LNFAKVQIDTVVQDFENQLRDASA-----DEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
           L  AK   D+ +++  N+L + S      +E  S ++     +   +   +P        
Sbjct: 577 LQDAKDTADSTIRNI-NKLANQSGAGKELEEQRSKLRNKIKDVDKKLAPKKP----QAPR 631

Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
              S  + + G+ V V S+  K  TV  +P     + VQ G +R  V   NIR
Sbjct: 632 KTISPKSLKIGDGVKVLSMNLK-GTVSSLPNAKGDLYVQMGILRSLV---NIR 680


>gi|414160430|ref|ZP_11416698.1| MutS2 protein [Staphylococcus simulans ACS-120-V-Sch1]
 gi|410878328|gb|EKS26213.1| MutS2 protein [Staphylococcus simulans ACS-120-V-Sch1]
          Length = 782

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 206/706 (29%), Positives = 349/706 (49%), Gaps = 84/706 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+  E+  ++R ++ V N +K       L+ +    Y  L 
Sbjct: 65  LSGLSKVSPLIHRAKIGSMLNVRELNQIKRLIQ-VQNQYKTFYSQL-LEEEEAINYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           E +     L++L ++I     C    + D AS +L+ IR+      +R  +NLD ++K  
Sbjct: 123 ERMTQLPILSDLYQEIKQ--KCDAYDLFDDASYELQSIRSRIHSTSQRIKQNLDRVVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           + Q      +   +IT R  R  + +KA ++    +GI  + SSSG T ++EP   VE N
Sbjct: 181 SNQ----KKLSDLIITVRNDRHVIPVKAEYRQDF-NGIVHDQSSSGQTLYIEPSAVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E AE   IL+ LT E+A  E +   + + V+ +ID   A+A +   + G  
Sbjct: 236 NKISRLRNDEKAEVERILTELTLEVA-GEADACLIAESVMGQIDFLTAKARYGSSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P  + +  V    +       HPLL               +P K+ V N+   V  +   
Sbjct: 295 PEFTEERKVYLPKAF------HPLL---------------DP-KTVVANTIEFVDGI--- 329

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                           + V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 330 ----------------QTVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSKLGVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           D +  DIGD QS+EQ+LSTFS H+  IV+IL+     S++L DE+G+GTDPSEG ALA S
Sbjct: 374 DNVYCDIGDEQSIEQSLSTFSSHMKNIVEILKHADHNSVILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  ++ R  L + TTHY +L           NA+ EF + TL PTY++L G  G SNA 
Sbjct: 434 ILDNVQKRGALVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            I+  +G + KII+ A+ ++      + +   + +  SL +  +++++Q      L  E 
Sbjct: 494 EISSKLGLNGKIIRDAKAMI-----GQDEQEINNMIASLEKNTKRVDNQRIELEQLLREA 548

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
            DL+R++  +          L  +   +  Q +  A  + + ++ D   QLR    DE N
Sbjct: 549 QDLHRQLSQKYDQYQNYEKQLMDEAKTKANQRVKVATKEAEEIISDL-RQLR----DEKN 603

Query: 636 SLIKESESAIAAIVEAHRP-DDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVV 689
           + +KE E     ++E  +  D+ +  ++   +    ++     G++V V + G K   V+
Sbjct: 604 ADVKEHE-----LIEKRKHLDEQYEATDLKQNVKKKKWDEIKAGDEVKVLTYGQK-GEVL 657

Query: 690 EVPGDDDTVLVQYGKMRVR-----VKKNNIRPIPNSKRKNAANPAP 730
           E+  DD+  +VQ G ++++     ++K      P +K  + +N +P
Sbjct: 658 EIL-DDEEAVVQMGIIKMKLPIADLEKKQKTQEPQTKMVSRSNRSP 702


>gi|257419214|ref|ZP_05596208.1| MutS2 protein [Enterococcus faecalis T11]
 gi|257161042|gb|EEU91002.1| MutS2 protein [Enterococcus faecalis T11]
          Length = 788

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 196/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQVNHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                NP K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|403384307|ref|ZP_10926364.1| MutS2 protein [Kurthia sp. JC30]
          Length = 789

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 214/726 (29%), Positives = 351/726 (48%), Gaps = 82/726 (11%)

Query: 17  LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           LE+ Q+LL +   AL++++ +  + +  I D+      A  G +LSP E+  +  T+RA 
Sbjct: 41  LEKVQQLLAEMDEALSILRIKGSVPMGGIFDVRPHARRAQIGGMLSPKELMEISSTIRA- 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
           + ++++  E  E D +   R    +   +    LT L+ +I  CID    + +D AS+ L
Sbjct: 100 SRIFREFIEVVEADDEV--RIPLFVAKKEELPILTGLQHEINSCIDDNAKV-MDSASQTL 156

Query: 136 ELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
             IR + +    R  + L SL +  +A    A  +   +IT R  R  + +KA ++    
Sbjct: 157 RSIRTQLRTQEGRVRDRLASLTRGSSA----AKMLSDTIITIRNDRFVIPVKAEYRSHY- 211

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
            G+  + S+SG T ++EP   V+ NN    L   E AE   IL  L+A++ +    +  L
Sbjct: 212 GGVIHDQSASGQTLYIEPDAVVQANNEIQGLKVKEKAEVDRILMELSAKVQEVAHSLFVL 271

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
           +  + EID+  A+A + Q      P ++ + ++    +      +HPLL           
Sbjct: 272 VQILGEIDVVLAKAKYGQAHKCTMPKMNDRGYMKLTKA------RHPLL----------- 314

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
                    DV               D  V  DI+   +   +VITGPNTGGKT ++KT+
Sbjct: 315 ---------DV---------------DTAVANDIEFGDDVTAIVITGPNTGGKTVTLKTI 350

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
           GL +LM++AGL +PA +   L  F  + ADIGD QS+EQ+LSTFS H+  IVDIL     
Sbjct: 351 GLCTLMAQAGLPVPALDGSELAVFTQLFADIGDEQSIEQSLSTFSSHMVNIVDILNEFDH 410

Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
           +SLVL DE+G+GTDP EG ALA SIL  +  R    + TTHY +L           NA+ 
Sbjct: 411 DSLVLFDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVVNASM 470

Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
           EF+++TL PTYR+L G  G SNA  I+K +G    II+ A+          + H    + 
Sbjct: 471 EFNVDTLSPTYRLLIGVPGRSNAFEISKRLGLPDNIIETAKSYT-----GTETHEVESMI 525

Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
            SL   RR+ E  A  +A L AE   L  +++ +  + +     L  K  ++ ++ +  A
Sbjct: 526 ASLETSRRQAEKDAEESARLLAESNALRADLDAKIAEYEATKDELAKKAKEKARKIVAEA 585

Query: 612 KVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR--------PDDDF--SVS 661
           K + ++++ +       A     N  +KE E     I++A +        P++       
Sbjct: 586 KQEAESIIDELHKMQHRA-----NQAVKEHE-----IIDARKRLESAAPAPENRILKKQR 635

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
           + N  + T Q G++V V S G +  T+++     +   VQ G +++++ + ++  I   K
Sbjct: 636 QLNARAQTLQVGDEVKVLSYGQR-GTLLKKDKSGEW-HVQIGILKMKLPEEDLEYIKPEK 693

Query: 722 RKNAAN 727
            K+  N
Sbjct: 694 VKDTVN 699


>gi|18310863|ref|NP_562797.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium perfringens str. 13]
 gi|38604940|sp|Q8XJ80.1|MUTS2_CLOPE RecName: Full=MutS2 protein
 gi|18145545|dbj|BAB81587.1| DNA mismatch repair protein [Clostridium perfringens str. 13]
          Length = 786

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 191/594 (32%), Positives = 301/594 (50%), Gaps = 59/594 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           I D AS+ L  IR    R+++  +S ++     I ++    +   L T R  R  + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNTQYLQDSLYTVRGDRYVIPVKA 200

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            +K  +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL+ L+  + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSVLVYKN 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              IK   + ++E+D  FA+A +   + G  PI++ +        I++   +HPL+    
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                       P                    D  V  DI +  E   ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KT GL  LM  +GL +PA  +  + +F+ I ADIGD QS+EQ+LSTFS H++ IV 
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVR 398

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           I+E  + +S VL DE+G+GTDP+EG ALA SIL+ LR R    + TTHY++L     K  
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
             ENA+ EF++ETLRPTYR+L G  G SNA  I++ +G    +I+ A+K++  E L+ E 
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
                 +L QSL E+  K E+ AR AA L  +        +++ + ++    ++ A   +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571

Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
           + +Q L+ AK + D ++++  +  R   S+D    L  E       I +A          
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           +        + G +  + S+  K+  V+  P +   V VQ G M++ VK  ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLR 684


>gi|317056492|ref|YP_004104959.1| MutS2 family protein [Ruminococcus albus 7]
 gi|315448761|gb|ADU22325.1| MutS2 family protein [Ruminococcus albus 7]
          Length = 802

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 199/624 (31%), Positives = 310/624 (49%), Gaps = 80/624 (12%)

Query: 26  QTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
           +T++AL M +++      +I +++  LN A +G  LS  E+  +++ L   N + +   +
Sbjct: 51  KTASALNMSIKNGTPAFYSINNVSASLNRAKAGGTLSLGELLEIKKVLGQTNELCRWFDQ 110

Query: 85  AAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 143
               + D     S L E L  N +    LE  I   +D + L   D AS +L  IR +  
Sbjct: 111 ----NEDKNTPLSYLFEQLFPNKSLWQRLETAI---LDSENL--SDDASPELRSIRNKIA 161

Query: 144 RN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
           +      E LD ++K  + Q +    + + ++T R  R  V +K   K  +  G+    S
Sbjct: 162 KAGLKIRETLDKMIKSPSTQKY----LQESIVTMRDGRFVVPVKTEFKGNV-GGLVHGTS 216

Query: 200 SSGATYFMEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
           ++G+T F+EP   VE NN EVR L   E  E   IL+  + E A  + +I+   D  +++
Sbjct: 217 ATGSTLFIEPISVVEANN-EVRILQGKEQDEIHRILTDFSKECAMMQPQIESSYDAAVKL 275

Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
           DL FA+A  A  M  V P       +S D  I +   +HPL+             + N +
Sbjct: 276 DLYFAKANLAAKMRAVDP------EISDDGIIVLNKARHPLI-------------DENKV 316

Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
                                 VPI+ +   +  V+VITGPNTGGKT ++KT+GL +LM+
Sbjct: 317 ----------------------VPINFRSGTDYNVLVITGPNTGGKTVTLKTVGLLTLMT 354

Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
             GL +PA +  ++  +  ILADIGD QS++Q+LSTFS H+ ++ DI++    ESLVLID
Sbjct: 355 MCGLMIPASDGCKISVYKNILADIGDRQSIQQSLSTFSSHMGKVKDIIDKADHESLVLID 414

Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
           E+GSGTDP EG ALA SI++ LR      V TTHY ++          ENA+ EF ++T+
Sbjct: 415 ELGSGTDPVEGAALAVSIIERLRQVGATVVTTTHYQEIKMYALDTDGVENASCEFDVDTM 474

Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
           RPTY+++ GS G SNA  I+K++G D  II  A+ L+       +  R   +   L + R
Sbjct: 475 RPTYKLVIGSPGKSNAFAISKNLGIDDDIIDYAKSLI-----SEENRRFEHIIDDLEKAR 529

Query: 559 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 618
             LE     A     E   L  E++++           K K  ++ + EL  A+ Q   +
Sbjct: 530 ISLEENNLLAEKYRKEAESLRNELDEQ-----------KQKFMEEKEFELEKARRQASDI 578

Query: 619 VQDFENQLRDASADEINSLIKESE 642
           V   + + + A  DE++ L KE E
Sbjct: 579 VNRVQRESQ-ALVDELDKLRKEKE 601


>gi|154503470|ref|ZP_02040530.1| hypothetical protein RUMGNA_01294 [Ruminococcus gnavus ATCC 29149]
 gi|153795570|gb|EDN77990.1| MutS2 family protein [Ruminococcus gnavus ATCC 29149]
          Length = 791

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 182/570 (31%), Positives = 285/570 (50%), Gaps = 68/570 (11%)

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           P+IT R  R CV +KA ++  + +G+  + SS+G+T F+EP   V+ NN    L   E  
Sbjct: 186 PIITMRGDRYCVPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ L+ E A+   EI+     + ++D  FAR   A  M+   P+L++      D 
Sbjct: 245 EIQVILARLSEETAQYIEEIRTDYHILTDLDFIFARGALAFSMNASRPLLNT------DG 298

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
            I+I   +HPLL               +P K                     VPI + + 
Sbjct: 299 RIHIREGRHPLL---------------DPKKV--------------------VPITVSLG 323

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
            +  +++ITGPNTGGKT S+KT+GL +LM ++GL++PA++   L  F  + ADIGD QS+
Sbjct: 324 DDFSLLIITGPNTGGKTVSLKTVGLFTLMGQSGLHIPARDRSELAVFKQVYADIGDEQSI 383

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQ+LSTFS H++ IV  L  V   SLVL DE+G+GTDP+EG ALA +IL YL  R    +
Sbjct: 384 EQSLSTFSSHMTNIVSFLHDVDENSLVLFDELGAGTDPTEGAALAIAILSYLHGRGIRTM 443

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L          ENA  EF +E+LRPTYR+L G  G SNA  I+  +G    II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPDYII 503

Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
           + A     + R   Q     +L   L   +R +E +    A+   EI  L  + + + + 
Sbjct: 504 EDA-----KTRLSEQDVSFEDLISDLETSKRTIEKEQEEIAAYKKEIEALKSQAQQKQER 558

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD-ASADEINS-----LIKESE 642
           ++ +   + A+  ++    L  AK   D  +++F    ++  SA E+         K  E
Sbjct: 559 IEEQRERILAEAREKANTILRDAKDVADETIKNFRKFGKENISAAEMEKERERLRKKMKE 618

Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
           +  ++ ++  +P  ++  ++        + GE V V S+ +   T+  +P     V VQ 
Sbjct: 619 NTASSSLKVQKPKKEYKPTDF-------KLGESVKVLSM-NLTGTISSLPDSRGNVTVQM 670

Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANP-APR 731
           G +R +V  +++  I        ANP AP+
Sbjct: 671 GILRSQVHISDLEII------EEANPYAPK 694


>gi|433655413|ref|YP_007299121.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
           M0795]
 gi|433293602|gb|AGB19424.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
           M0795]
          Length = 786

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 207/709 (29%), Positives = 346/709 (48%), Gaps = 76/709 (10%)

Query: 16  SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           +L+++ K +++ + A++ + S        + I  ILN A     L+  ++  + R L   
Sbjct: 39  NLDKAAKEIDKVNEAVSFISSYGNMSFAFKKIDDILNKAKIKSTLNIGQLMTISRFLSLA 98

Query: 76  NNVWKKL-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             V   L +E  E +   L+ Y+  L  L+      +L E+I      +++I  D  S+D
Sbjct: 99  GRVKSYLRSEKEESNYPLLREYNIRLTNLR------DLYERID-----RIVISEDELSDD 147

Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPD 192
                 + +R   ++++ +K     I  +    +  P+IT R  R  V +K  ++     
Sbjct: 148 ASPALKDIRRQKAHINNKIKDTLNYIIASSSKELQDPIITIRNGRYVVPVKQEYRGTFK- 206

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           G+  + SSSGAT F+EP   VE NN   +L   E  E   ILS LT +I++   EI   M
Sbjct: 207 GLIHDQSSSGATLFIEPMTVVELNNDLRQLEIKEQQEIEKILSELTDDISQHISEIHENM 266

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
             + E+D+ FA+A ++   +   P+ ++  +      IN++  +HPLL            
Sbjct: 267 IALTELDVIFAKAKYSINTNSSKPVFNTHGY------INLKNARHPLL------------ 308

Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
               P                    D  VPI + +      +VITGPNTGGKT ++KT+G
Sbjct: 309 ----P-------------------KDAVVPISVYLGDSFDTLVITGPNTGGKTVTLKTVG 345

Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
           L +LM+ +GL +P      + +FD I  DIGD QS+EQ+LSTFS H++ IV IL  V+  
Sbjct: 346 LLTLMAMSGLNIPTDEGSSVAFFDNIFVDIGDEQSIEQSLSTFSAHMTNIVTILNSVTSN 405

Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
           SLVL+DE+G+GTDP+EG ALA SIL +L       + TTHY++L     K+   ENA+ E
Sbjct: 406 SLVLLDELGAGTDPTEGAALAMSILDFLHRINCRTIATTHYSELKQYALKNDGVENASVE 465

Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSEL 550
           F +ETLRPTYR+  G  G SNA  I++ +G + +II  A+  +  E L+ E       ++
Sbjct: 466 FDVETLRPTYRLTIGIPGKSNAFEISRRLGLNEEIIDNARNYITNEELKFE-------DI 518

Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
            + L ++R + E        L  ++  +  E E + +  +     +  K  ++ ++ L  
Sbjct: 519 IKDLEDKRIEAEKAKEEIEDLKRQVNSVKEEYERKRRQTEAERDRIIEKAREKARKILEN 578

Query: 611 AKVQIDTVVQDFENQLRDA-SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
            K   D ++     +LR+A  +D+ N LI+E+   +   +     ++    SE       
Sbjct: 579 TKSTADEIIA----KLREAEKSDKKNKLIEEARKKLKENISEM--EESLKKSEVPVYKKI 632

Query: 670 PQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           P+    G+  ++  L D+  T +  P  D  V +Q G +++ V  +N+R
Sbjct: 633 PKKVMPGQTFYIVPL-DQTGTALSEPDKDGNVKIQAGILKMNVHISNLR 680


>gi|257085338|ref|ZP_05579699.1| MutS 2 protein [Enterococcus faecalis Fly1]
 gi|256993368|gb|EEU80670.1| MutS 2 protein [Enterococcus faecalis Fly1]
          Length = 788

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKHAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|205374420|ref|ZP_03227217.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           coahuilensis m4-4]
          Length = 766

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 219/723 (30%), Positives = 346/723 (47%), Gaps = 86/723 (11%)

Query: 16  SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           SLE+   L  +T  A  +++ +    L  I +I   L  A  G +L+ SE+  V  T+ A
Sbjct: 21  SLEDVITLQEETDEAATVLRLKGHAPLGGIFNIRPQLKRAEIGGMLNASELVEVASTIYA 80

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
            + + +   E    +G  L    P+   L+     LT LE +I   ID    I LD AS 
Sbjct: 81  -SRMIRAFEEQLSEEGVDL----PIFHGLISEMPILTGLEHEIKQSIDDNGEI-LDGASP 134

Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L  IR++R+    R  E L+S+++   AQ   +  I    +T R  R  + +K  ++  
Sbjct: 135 ALRSIRSQRRLTEGRVREKLESMVRSRNAQKMLSDAI----VTIRNDRYVLPVKQEYRGH 190

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
              GI  + SSSG T F+EP+  V+ NN    L   E  E   IL  L+  +++   ++ 
Sbjct: 191 Y-GGIVHDQSSSGQTLFIEPESVVQLNNSLRELRVKEQTEIEKILLELSGRVSEVTEDLS 249

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
            +++ +  ID  F +A + + + G  P ++ +  +    +      +HPLL         
Sbjct: 250 VIINHLAHIDFMFTKAKYGRSIKGTKPSMNDKGRIKLFKA------RHPLL--------- 294

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                                    GI +  V  DI +  +   +VITGPNTGGKT ++K
Sbjct: 295 -------------------------GIEE-AVANDIFLGEDFTTIVITGPNTGGKTVTLK 328

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+G+ +L+++AGL +PA +   L  F  + ADIGD QS+EQ+LSTFS H+  IVDIL+ V
Sbjct: 329 TIGICTLLAQAGLPIPALDGSELAVFQSVYADIGDEQSIEQSLSTFSSHMVNIVDILDKV 388

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
             +SLVL DE+G+GTDP EG ALA SIL Y+  R    V TTHY +L           NA
Sbjct: 389 DFQSLVLFDELGAGTDPQEGAALAISILDYVYKRGARVVATTHYPELKAYGYNREGVVNA 448

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF +ETLRPTYR+L G  G SNA  I+K +G    +I  A     R+       +   
Sbjct: 449 SVEFDVETLRPTYRLLLGVPGRSNAFEISKRLGLSDDVIDYA-----RVHIGTDSKQVEN 503

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
           +  SL E +R  E +   A  L      L+R+++ +  +   +   L  K   +  + + 
Sbjct: 504 MIASLEESKRMAEKERMEANELLKSADKLHRDLQKQTVEYYEKKDELVDKAKDKAIKIVE 563

Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS---------V 660
            AK + + ++++  N LR       N+ +KE E     ++EA +  +D +          
Sbjct: 564 EAKREAEEIIRELRN-LRIQK----NAEVKEHE-----LIEAKKRLEDATPTKNMKKTQA 613

Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
           S T++    P  G+ V V S G K   ++E  G+ +   VQ G ++++V+  +I  +   
Sbjct: 614 SRTDSKELRP--GDDVKVLSFGQK-GVLLEKTGEAEWA-VQMGILKMKVETKDIEFVSRK 669

Query: 721 KRK 723
           K K
Sbjct: 670 KEK 672


>gi|379011153|ref|YP_005268965.1| MutS-like protein [Acetobacterium woodii DSM 1030]
 gi|375301942|gb|AFA48076.1| MutS-like protein [Acetobacterium woodii DSM 1030]
          Length = 789

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 207/655 (31%), Positives = 320/655 (48%), Gaps = 76/655 (11%)

Query: 7   QKAQIPFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSE 64
           Q  Q+   ++L    + L+ T+ +L MM    +P  LS + + +  +  A  G +LS  E
Sbjct: 30  QAGQLLPLETLTAVNRSLDLTNESLGMMLRNGRP-PLSDVPNTSDYVKRAAIGSMLSMKE 88

Query: 65  ICAVRRTLRA---VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
           + A+   LR    ++N +   T+      D+L     L   L+ C    ELE++I     
Sbjct: 89  LLAIATLLRISRDMDNYYHGDTQM-----DTLILLKDLFTSLETCE---ELEKEIS---- 136

Query: 122 CKLL---IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
            K+L    + D AS +L  IR E +   + +   L  + +       + + ++T R +R 
Sbjct: 137 RKILGPEEMADNASRELSRIRREMQFKYKRISEKLNHMISSTSYDKMLQEKIVTIRNNRY 196

Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
            + +K  ++  +P GI L+ S+SGAT F+EP   VE NN    L   E  E   IL  L+
Sbjct: 197 VIPVKQEYRSQVP-GIVLDKSASGATLFIEPIAVVELNNDIKILVAEEEQEIVRILKELS 255

Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
             +A    EI    D ++++D  FA+  +   ++GV      ++ VS    I +   KHP
Sbjct: 256 QNVADQRDEIICNYDILIDLDFQFAKGKYGLAINGV------KTDVSETGRIALLRAKHP 309

Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
           L+                P        E  V S            DI  E E   +VITG
Sbjct: 310 LI----------------P-------DEQVVAS------------DIYFEEEIDTMVITG 334

Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
           PNTGGKT S+KT+GL +LM ++GL++P +   +   F  I ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTVSLKTIGLLNLMVQSGLFIPVREGSKTRIFTNIFADIGDEQSIEQNLSTFSSH 394

Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
           ++ IV+I+     +SLVL DE+G+GTDP+EG ALA SIL  L  R   ++ TTHY++L  
Sbjct: 395 MTNIVEIMNKADHDSLVLFDELGAGTDPTEGAALAISILNALHLRHVTSISTTHYSELKE 454

Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
                    NA+ EF ++TLRPTYR+L G  G SNA  IA  +G    +I+ A++L+   
Sbjct: 455 FALVTPGVVNASVEFDIKTLRPTYRLLIGVPGKSNAFEIAVRLGLAETVIENAKELI--- 511

Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
             + +  R  E    + E+RR+ E++      L  +  +L R+++ E +  D     L A
Sbjct: 512 --KNEAIRFEETLIKIDEKRRRTEAEHDAIIRLKRDTEELKRQMDREKERFDEEKQVLIA 569

Query: 599 KE-------TQQVQQELNFAKVQIDTVVQDFENQLRDASADE-INSLIKESESAI 645
           K         ++ ++E      +I T+ +   N ++D    E I   IKE E  I
Sbjct: 570 KAQEEAMEIVKKTREETEAIYREIRTIQETTTNAVKDNKELEAIRKRIKEKEKNI 624


>gi|386759420|ref|YP_006232636.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. JS]
 gi|384932702|gb|AFI29380.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. JS]
          Length = 785

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 220/740 (29%), Positives = 368/740 (49%), Gaps = 83/740 (11%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           Q+    S++E +K L++   A A+++ +       + DI G L  A  G +LSPSE   +
Sbjct: 33  QLKPSASIDEIKKQLDEVDEASAIIRLRGRAPFGGLVDIRGALRRAEIGSVLSPSEFTEI 92

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
              L AV  +   +T+ AE DG  +    PL+ +  +    L++LE  I  CID    + 
Sbjct: 93  SGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAEQLITLSDLERDINSCIDDHGEV- 146

Query: 128 LDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
           LD ASE L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K
Sbjct: 147 LDHASEKLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVK 202

Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
             ++     GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT + A+
Sbjct: 203 QEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEKTAE 261

Query: 244 SEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
              E+ +L  +VL+ +D  FA+A +A+ +    P+++          I ++  +HPLL  
Sbjct: 262 HTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPMMNDTGF------IRLKKARHPLL-- 312

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                         P    V N                   DI++  +   +VITGPNTG
Sbjct: 313 --------------PPDQVVAN-------------------DIELGGDFSTIVITGPNTG 339

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++KTLGL +LM+++GL++PA        F+ + ADIGD QS+EQ+LSTFS H+  I
Sbjct: 340 GKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNI 399

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V ILE V+  SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L      
Sbjct: 400 VGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTHYPELKAYGYN 459

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
                NA+ EF +ETL PTY++L G  G SNA  I+K +G    II +A+  +       
Sbjct: 460 REGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAKSEM-----TA 514

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
           + +    +  SL + +++ E +     S+  E   L++E++ +  +L+ +   +  +  Q
Sbjct: 515 EHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHKELQQQIIELNSKKDKMLEEAEQ 574

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFS 659
           Q   ++  A  + + ++ +  +   +  + + + LI   K  E A+    ++ +P+    
Sbjct: 575 QAADKVKAAMKEAEDIIHELRSIKEEHKSFKDHELINAKKRLEGAVPTFEKSKKPEK--- 631

Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
            ++T    F P  G++V V + G K  T++E  G ++   VQ G ++++VK+ ++  I +
Sbjct: 632 -TKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN-VQIGILKMKVKEKDLEFIKS 686

Query: 720 SKRKNAANPAPRLRKQVCTC 739
           +       P P+  K +   
Sbjct: 687 A-------PEPKKEKIITAV 699


>gi|418614027|ref|ZP_13177017.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU118]
 gi|374821896|gb|EHR85937.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus epidermidis VCU118]
          Length = 782

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 201/661 (30%), Positives = 322/661 (48%), Gaps = 89/661 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++ +++ A  G +L+ +E+  ++R L  V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + + +   LT+L ++I    D   L   D AS  L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNHLPILTDLFKEINETCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
             Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  ++ +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P          D +I +    HPLL            +N+     DVE            
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL Y+R    L + TTHY +L           NA+ EF +ETL PTY++L G  G SNA 
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
           +I+K +G    II +A+ ++        +   + + +SL +  ++++ Q        R A
Sbjct: 494 DISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELDRLVREA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
              H  +   Y++ ++  K L   A   K K  Q+V+     A  + D ++++  N LRD
Sbjct: 549 QQTHDALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               E    +KE E     I +  + DD + V          ++     G++V V S G 
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQ 652

Query: 684 K 684
           K
Sbjct: 653 K 653


>gi|218233457|ref|YP_002369349.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           cereus B4264]
 gi|228960821|ref|ZP_04122456.1| hypothetical protein bthur0005_42770 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229048260|ref|ZP_04193828.1| hypothetical protein bcere0027_42280 [Bacillus cereus AH676]
 gi|229129836|ref|ZP_04258802.1| hypothetical protein bcere0015_42760 [Bacillus cereus BDRD-Cer4]
 gi|229147111|ref|ZP_04275470.1| hypothetical protein bcere0012_42480 [Bacillus cereus BDRD-ST24]
 gi|229152748|ref|ZP_04280932.1| hypothetical protein bcere0011_42810 [Bacillus cereus m1550]
 gi|296505027|ref|YP_003666727.1| DNA mismatch repair protein mutS [Bacillus thuringiensis BMB171]
 gi|423584921|ref|ZP_17561008.1| MutS2 protein [Bacillus cereus VD045]
 gi|423631267|ref|ZP_17607014.1| MutS2 protein [Bacillus cereus VD154]
 gi|423657494|ref|ZP_17632793.1| MutS2 protein [Bacillus cereus VD200]
 gi|226723046|sp|B7HF67.1|MUTS2_BACC4 RecName: Full=MutS2 protein
 gi|218161414|gb|ACK61406.1| MutS2 family protein [Bacillus cereus B4264]
 gi|228630726|gb|EEK87371.1| hypothetical protein bcere0011_42810 [Bacillus cereus m1550]
 gi|228636360|gb|EEK92831.1| hypothetical protein bcere0012_42480 [Bacillus cereus BDRD-ST24]
 gi|228653527|gb|EEL09399.1| hypothetical protein bcere0015_42760 [Bacillus cereus BDRD-Cer4]
 gi|228722985|gb|EEL74362.1| hypothetical protein bcere0027_42280 [Bacillus cereus AH676]
 gi|228798843|gb|EEM45822.1| hypothetical protein bthur0005_42770 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|296326079|gb|ADH09007.1| DNA mismatch repair protein mutS [Bacillus thuringiensis BMB171]
 gi|401235113|gb|EJR41586.1| MutS2 protein [Bacillus cereus VD045]
 gi|401263840|gb|EJR69956.1| MutS2 protein [Bacillus cereus VD154]
 gi|401289050|gb|EJR94771.1| MutS2 protein [Bacillus cereus VD200]
          Length = 786

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 212/720 (29%), Positives = 352/720 (48%), Gaps = 89/720 (12%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMADNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I++A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
           L E ++  E     A +L  +   L+RE++ +  +   DR    LKA+  ++ ++++  A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAA 583

Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
           K + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633

Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           +  P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|150015832|ref|YP_001308086.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium beijerinckii NCIMB 8052]
 gi|229486368|sp|A6LS00.1|MUTS2_CLOB8 RecName: Full=MutS2 protein
 gi|149902297|gb|ABR33130.1| MutS2 family protein [Clostridium beijerinckii NCIMB 8052]
          Length = 786

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 218/711 (30%), Positives = 355/711 (49%), Gaps = 77/711 (10%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           +L E    L +T+ AL ++ S+   PL+   + DI   +  A  G  LSP ++  V   L
Sbjct: 39  NLYEINNKLEETNEALEILISKGNPPLE--GLADIHEGIERAKKGGTLSPGQLLKVGGML 96

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
           +A  N+ K+  +  E++    + Y  L +L      +  LE++I   I  +  I  D+AS
Sbjct: 97  KATRNM-KEFFKREEVE----KSYPKLEDLAYILAPVKALEDEIERAIVSEDEIS-DKAS 150

Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLL 190
           + L  IR    R+++  +S +++  + I ++    +   L T R  R  + +K+ +K  +
Sbjct: 151 QTLCNIR----RSLKEKNSSVREKISSIVRSNSKYLQDDLYTMRGDRYVLPVKSEYKSQV 206

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
           P G+  + SS+GAT+F+EP   V  NN    L   E AE   ILS L+ ++  +      
Sbjct: 207 P-GLVHDQSSTGATFFIEPMSLVNLNNEIRELFLKEKAEIERILSDLSLKVKINGDSCLS 265

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            +  ++E D  FA+  +A  ++ + PI      V  D + +I   +HPL           
Sbjct: 266 NLKVLVEFDFIFAKGRYASALNAIKPI------VREDGAFSIFSGRHPL----------- 308

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                      +EN             D  VP DI +  E + ++ITGPNTGGKT ++KT
Sbjct: 309 -----------IEN-------------DKVVPSDIYLGEEFQTLMITGPNTGGKTVTIKT 344

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           +GL  +M  +GL +PA+++  + +F  I ADIGD QS+EQ+LSTFS H++ IV+I++ V 
Sbjct: 345 VGLLHIMGLSGLLIPARDNSSIAFFKEIFADIGDEQSIEQSLSTFSSHMTNIVNIMKHVD 404

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SL L DE+G+GTDP+EG ALA SIL+ LR+R    + TTHY++L     K    ENA+
Sbjct: 405 DKSLALFDELGAGTDPAEGAALAVSILETLRNRGAKLIATTHYSELKAYALKTDGVENAS 464

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE---RQQH 545
            EF +ETLRPTYR+L G  G SNA  I+K +G    +I+RA++ +  E L+ E   R+  
Sbjct: 465 VEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKEYMSEENLQFENLIRELQ 524

Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK-DLDRRAAHLKAKETQQV 604
            KS + +    E + L  QA      + E ++      ++A  D  R A  + A    + 
Sbjct: 525 EKSIIAKKEAREAKMLRDQAEDLKKKYEEKLEKLENTREKAYMDARREAKEIIANAKDEA 584

Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
              L   +      +     Q  +    ++   ++E E  I      H+  ++   S TN
Sbjct: 585 DDILKAMRELEKLGIAGGGRQRLEEERKKLKDSLEEREKGI------HKMKENEGESITN 638

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
            +      G + ++ SL  K+  +V +P +   V V+ G M+V VK  ++R
Sbjct: 639 VT-----LGMEAYLPSLNQKV-IIVSMPDNRGEVQVEAGIMKVNVKLKDLR 683


>gi|307244041|ref|ZP_07526160.1| putative recombination and DNA strand exchange inhibitor protein
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492565|gb|EFM64599.1| putative recombination and DNA strand exchange inhibitor protein
           [Peptostreptococcus stomatis DSM 17678]
          Length = 807

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 224/747 (29%), Positives = 362/747 (48%), Gaps = 70/747 (9%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQL 59
           +G ++++K + P   + EE +    +T+ A +++ ++  + L  I DI      A  G +
Sbjct: 26  LGLSMIEKLR-PMS-TFEEVKTAQEETTEAQSILINRGHVPLEGIHDIGDKAKRADLGAV 83

Query: 60  LSPSEICAVRRTLRA---VNNVW----KKLT---EAAELDGDSLQRYSPLLELLKNCNFL 109
           L P  +  +  T+RA   ++NV     KK T       +D +  +   P+++ L    ++
Sbjct: 84  LEPKSLLDLADTMRATRVLSNVLSGQIKKETFGNSETSIDEEDDEIKYPIIQSLATSLYI 143

Query: 110 -TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
             ++EE+I   I  +L I  D AS +L  IR    +  +++ S L  + +       +  
Sbjct: 144 HKDIEEEIFNAIISELEI-ADSASPELRSIRRRILQKNQSIRSKLNGIISSTTYQKYLQD 202

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
            +I+ R  R  V +KA ++ ++  GI  + SSSGAT F+EP   VE NN   +L   E  
Sbjct: 203 AIISMRGDRFVVPVKAEYRSMMA-GIIHDQSSSGATLFIEPMTIVEMNNDLRQLKLQEKE 261

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ L+A + +  RE+    + + ++D AFA+   +  M    P L+       D 
Sbjct: 262 EIEKILANLSAMVGQVSRELLSNQEILAKLDFAFAKGKLSIDMKATEPDLNQ------DR 315

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
            + I G +HPLL                  KS V N                   DI + 
Sbjct: 316 LVRIVGGRHPLL----------------DRKSVVAN-------------------DIILG 340

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
            +   ++ITGPNTGGKT ++KTLGL +LM++ GL+L A     +  FD I ADIGD QS+
Sbjct: 341 GDYSTLLITGPNTGGKTVTIKTLGLFALMTQCGLHLSANYGTSMCIFDQIFADIGDDQSI 400

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQNLSTFS H++RIVDI+E V+ +SLV+ DE+G+GTDP EG ALA +IL+ +R      +
Sbjct: 401 EQNLSTFSSHMTRIVDIVERVTDQSLVIFDELGAGTDPEEGAALAIAILENIRSSGASCI 460

Query: 469 VTTHYADLS--CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
            TTHY++L    L  KD   ENAA EF + TL PTYR+L G  G SNA  I++ +G    
Sbjct: 461 ATTHYSELKKYALAKKDV--ENAAVEFDMGTLSPTYRLLIGVPGKSNAFEISRKLGLGEH 518

Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
           II +A+  +     E +     E+ Q++ + R K + +   A     EI D+  + + + 
Sbjct: 519 IIDQAKNFLTNEDIEIE-----EVLQNVEKSRLKTQEELERAERYRQEIEDIKLDYQAKL 573

Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 646
           + LD+  A +      Q    +  AK   D ++++     R   + E +  ++E    I 
Sbjct: 574 EKLDKSKAKVLENARSQAFSIVRQAKEDTDAMIKEIRKTDRLKDSREKDRRLEEIRKKIG 633

Query: 647 AIVEAHRPDDDFSVSETNTSS--FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
             +   +P  +  V     S    T + G  V++ +L     TV+         +VQ G 
Sbjct: 634 QSMGKFQPSVESMVVPKYASKEIKTLKPGTDVNIITLRQD-GTVISADDKKKEAIVQVGI 692

Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPR 731
           M++ +   +++ I   K KN      R
Sbjct: 693 MKMSLPYKSLKLIAK-KEKNTVTKTTR 718


>gi|73662960|ref|YP_301741.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|123642323|sp|Q49WR1.1|MUTS2_STAS1 RecName: Full=MutS2 protein
 gi|72495475|dbj|BAE18796.1| MutS-like protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 782

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 209/709 (29%), Positives = 351/709 (49%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  I+  ++ A  G +LS SE+  ++R ++ + N +K       L+ +    Y  L 
Sbjct: 65  LSGLAKISTYIHRAKIGGVLSVSELNVIKRLIQ-IQNQYKTFYNNL-LNEEETINYPILN 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + ++    L++L + I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DRMEQLPVLSDLYQSI--HQKCDTYDLYDNASYELQGIRSKISSTNQRIKQNLDKIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE +
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMS 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   ILS LT E+A+ E +   + + ++ +ID   A+A +A  + G  
Sbjct: 236 NQISRLKNDEAIERERILSALTVEVAE-EADACLISESIMGQIDFLTAKARYASSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P  +       D ++ +    HPLL   ++       +N+     D+E            
Sbjct: 295 PQFTK------DRTVYLPKAFHPLLDKQTV------VANTIEFAQDIE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++G+ +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGILIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+  ++ SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDTTKNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++ +   L + TTHY +L           NA+ EF + TL PTY++L G  G SNA 
Sbjct: 434 ILDHVHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM-------EERRKLESQARTA 568
           +I+K +G + K+IQ+A+ ++      + +   +E+  SL        E+R +L+   R A
Sbjct: 494 DISKKLGLNMKVIQKAKSMI-----GQDEQEINEMIASLESNSKRVDEQRIELDYLLREA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
              H  +   Y + ++  K L   A   K K  Q+V+     A  + D ++++   +LRD
Sbjct: 549 QDTHDALAKQYEQYQNHEKQLMNEA---KEKANQRVKS----ATKEADDILKELR-ELRD 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  + DD +       +    ++     G++V V + G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKQLDDQYEAKSLKQNVQKKKWDEINAGDEVKVLTYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYG--KMRV------RVKKNNIRPIPNSKRKN 724
           K   V+E+  D++  +VQ G  KM++      + KK    P    KR+N
Sbjct: 653 K-GEVLELI-DNNEAVVQMGIIKMKLPLEDLEKTKKTKSEPTKMIKREN 699


>gi|291087888|ref|ZP_06347777.2| MutS2 protein [Clostridium sp. M62/1]
 gi|291073610|gb|EFE10974.1| MutS2 family protein [Clostridium sp. M62/1]
          Length = 818

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 213/699 (30%), Positives = 331/699 (47%), Gaps = 79/699 (11%)

Query: 27  TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR-AVNNVWKKLTEA 85
           T A   + Q   L    ++DI   L     G  L+  E+ AV   L  A         E 
Sbjct: 53  TDAVTRVRQKGSLSFGGLKDITDSLKRLEIGSSLNIVELLAVSSVLTVAARAKSYGRREE 112

Query: 86  AELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK-- 143
           +EL  DSL     LLE L   N  TE++     CI  +  +  D AS  L  +R + K  
Sbjct: 113 SELPDDSLDEMFRLLEPLTPVN--TEIKR----CILSEDEVS-DDASPGLRQVRRQMKVI 165

Query: 144 --RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 201
             R    L+S+L      +  A      +IT R  R C+ +KA HK  +P G+  + S++
Sbjct: 166 NDRIHTQLNSVLNSSRTYLQDA------VITMRDGRYCLPVKAEHKNQVP-GMVHDQSAT 218

Query: 202 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 261
           G+T F+EP   +  NN    L   E  E   +L  L++++      +   +  +  +D  
Sbjct: 219 GSTVFIEPMAVIRLNNEMRELEIQEKREIEFVLMALSSQLVPYTETLAENLSILARLDFI 278

Query: 262 FARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 321
           FA+A  ++  +   P  +++ +      INI+  +HPLL               +P K  
Sbjct: 279 FAKASLSRHFNCTEPKFNNRRY------INIKDGRHPLL---------------DPKKV- 316

Query: 322 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 381
                              VPI+I +     ++++TGPNTGGKT S+KT+GL +LM +AG
Sbjct: 317 -------------------VPINIYLGDSFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAG 357

Query: 382 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIG 441
           L++PA +   L  FD + ADIGD QS+EQ+LSTFS H++ IV IL      SL L DE+G
Sbjct: 358 LHIPAFDGSELAVFDNVFADIGDEQSIEQSLSTFSAHMTNIVSILNEADSNSLCLFDELG 417

Query: 442 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 501
           +GTDP+EG ALA ++L +L +     + TTHY++L      +   ENA  EFS+ETLRPT
Sbjct: 418 AGTDPTEGAALAVAVLTFLHNMQCRTMATTHYSELKVFALTEPGVENACCEFSVETLRPT 477

Query: 502 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 561
           YR+L G  G SNA  I+K +G    II+ A++ +     E++     +L  +L E R  +
Sbjct: 478 YRLLIGIPGKSNAFAISKKLGLPDYIIEDAKRHI-----EKEDAAFEDLLANLEESRITI 532

Query: 562 ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQD 621
           E +    ++  AEI  L + +  + +    +   L  K  ++ Q+ L  AK   D+ +++
Sbjct: 533 EKEREELSAYKAEIAQLKQRLTQKEERFQDQKERLLEKAREEAQKILQDAKDTADSTIRN 592

Query: 622 FENQLRDASA-----DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQV 676
             N+L + S      +E  S ++     +   +   +P           S  + + G+ V
Sbjct: 593 I-NKLANQSGAGKELEEQRSKLRNKIKDVDKKLAPKKP----QAPRKTISPKSLKIGDGV 647

Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
            V S+  K  TV  +P     + VQ G +R  V   NIR
Sbjct: 648 KVLSMNLK-GTVSSLPNAKGDLYVQMGILRSLV---NIR 682


>gi|257439769|ref|ZP_05615524.1| MutS2 protein [Faecalibacterium prausnitzii A2-165]
 gi|257197789|gb|EEU96073.1| MutS2 family protein [Faecalibacterium prausnitzii A2-165]
          Length = 803

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 220/744 (29%), Positives = 353/744 (47%), Gaps = 110/744 (14%)

Query: 18  EESQKLLNQTSA--ALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           +E +  L QT A  +L +    P     +E ++ ++  AV G +LS  E+  V   LR  
Sbjct: 41  DEVRYALEQTDAINSLLIKNGSP-RFGGVEGVSSLVARAVKGGVLSMGELLMVAGALRNF 99

Query: 76  NNV--WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI---DCKLLIILDR 130
            N+  W   +E   L  D         +L         LE++I   I   D     + D 
Sbjct: 100 QNLTSWYGSSEHDALPTD---------DLFYALAPQPGLEQQISSAILAPDA----MADT 146

Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           AS  L  +R + +    ++   L+ +   +  +  + + +++ R  R  V +K+ ++  +
Sbjct: 147 ASHTLNELRKKIRATENSIRDRLESMVRNMDTSKYLQESVVSIRNGRYVVPVKSEYRGEV 206

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  +VSS+GAT F+EP+  VE N   ++    E  E   IL   TA++A  E + +Y
Sbjct: 207 -SGIIHDVSSTGATVFVEPQAVVEANARILQYRAQEAQEIERILVAFTAQVAAIEPQFQY 265

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               +LEID+  A+A  A  M    P       V  DSS ++   +HPL+          
Sbjct: 266 SYKAMLEIDVLLAKARLALDMKAFKP------SVRTDSSFSLIRARHPLI---------- 309

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K                     VP+DI +  E   ++ITGPNTGGKT ++KT
Sbjct: 310 -----DPKKC--------------------VPVDIALGKEYDSLIITGPNTGGKTVTLKT 344

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
            GL   M++ G  +PA     +  FD  L DIGD QS+EQ+LSTFSGH+ +I  ILEL  
Sbjct: 345 AGLLCAMAQCGFLIPADERSEICVFDEFLVDIGDEQSIEQSLSTFSGHMKKITGILELAM 404

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             +LVL+DE+G+GTDP+EG ALA +I++ LR R  L + TTHYA+L     +     NA+
Sbjct: 405 PHTLVLLDELGAGTDPAEGAALAVAIIEELRRRGVLLMATTHYAELKVFALETKGVVNAS 464

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF LETLRPTY++  G  G SNA  I++ +G   ++I+ AQ                  
Sbjct: 465 CEFDLETLRPTYKLSVGVPGKSNAFLISEKLGIPERVIEAAQ------------------ 506

Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH-LKAKE------TQQ 603
            Q L  E ++L++       L  ++    +E +DE ++L   A+H L+A +       QQ
Sbjct: 507 -QHLSAEDKRLDAVLGQLDDLKLQL----KESQDEVEELKNEASHQLEAAQKKRDELIQQ 561

Query: 604 VQQELNFAKV-------QIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPD 655
            + EL  A+        Q+++      ++LR    DE  S  ++++ A   A  E+ +  
Sbjct: 562 GENELEAARAKARALAQQVESKAYALTDELRQLQKDERLSTQQKAQRAREIAKKESEKLF 621

Query: 656 DDFSVSETNTSSFTP----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
               V       F P    + G++V +  L ++LATV+ +P  +  VLV+ G ++ ++  
Sbjct: 622 IGTEVVHNPVKEFVPLKEVKVGQEVCIAEL-NQLATVLALPDKNGDVLVRAGIIKTKIPL 680

Query: 712 NNIRPIPNSKRKNAANPAPRLRKQ 735
             ++  P+   K    P P+ + Q
Sbjct: 681 KGLKQ-PD---KLIKEPQPKTKAQ 700


>gi|357054690|ref|ZP_09115771.1| hypothetical protein HMPREF9467_02743 [Clostridium clostridioforme
           2_1_49FAA]
 gi|355383994|gb|EHG31065.1| hypothetical protein HMPREF9467_02743 [Clostridium clostridioforme
           2_1_49FAA]
          Length = 812

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 222/737 (30%), Positives = 344/737 (46%), Gaps = 88/737 (11%)

Query: 5   VVQKAQIPFGKSL----------EESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNS 53
           + + A  P GK+L          EE +    QT+ A+  ++ +  +  S I DI   L  
Sbjct: 18  LTEYAASPLGKALCQSLSPSSDLEEVRTWQAQTTDAVTRIRLKGSVSFSGIRDIGDSLKR 77

Query: 54  AVSGQLLSPSEICAVRRTL----RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
              G  LS  E+ ++   L    RA         E     G+S   +  L  L      L
Sbjct: 78  LDIGSSLSIPELLSISSLLTVAARAKAYGRHDADEDGRETGESQDDFDSLEPLFAGLEPL 137

Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGG 165
           T L  +I  CI  +  +  D AS  L  +R   K    R    L+S+L    + +  A  
Sbjct: 138 TPLNSEIKRCILSEDEVA-DDASPGLSHVRRSMKVTADRIHTQLNSILNSNRSYLQDA-- 194

Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
               +IT R  R C+ +K+ +K  +  G+  + S++G+T F+EP   +  NN    L   
Sbjct: 195 ----VITMRDGRYCLPVKSEYKNQV-SGMVHDQSATGSTLFIEPMAIIRLNNEMRELEIQ 249

Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
           E  E  A+L+ L+ + A    E++  M+ + ++D  FA+AG A+      P+ + +    
Sbjct: 250 EQKEIEAVLASLSNQAAPYTEELRMDMELLAQLDFIFAKAGLARHYKCSAPMFNDKG--- 306

Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
               I+I+  +HPLL               NP                     F VPI++
Sbjct: 307 ---CIHIKDGRHPLL---------------NP--------------------QFVVPINV 328

Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
            +  E  ++++TGPNTGGKT S+KT+GL +LM ++GL++PA     L  FD + ADIGD 
Sbjct: 329 WLGREFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGLHIPAWEGSELAVFDQVFADIGDE 388

Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
           QS+EQ+LSTFS H++ IV IL      SL L DE+G+GTDP+EG ALA +IL +L +   
Sbjct: 389 QSIEQSLSTFSAHMTNIVRILSEADSRSLCLFDELGAGTDPTEGAALAIAILSFLHNMKC 448

Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
             + TTHY++L          ENA  EF++ETL+PTYR+L G  G SNA  I++ +G   
Sbjct: 449 RTMATTHYSELKVFALSTPGVENACCEFNVETLQPTYRLLIGIPGKSNAFAISQKLGLPG 508

Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
            II  A+  +     E +     +L  SL   R  +E +     +   EI  L   +  +
Sbjct: 509 YIIDDAKSHL-----EAKDESFEDLLTSLESSRLTIEKEQAEINAYKDEIASLKTRLTQK 563

Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 645
            + LD R   +    T++ Q+ L  AK   D  ++   N+L  +S      + KE E+  
Sbjct: 564 EERLDERKDKILKNATEEAQRILREAKETADQTIKQI-NKLAASSG-----MGKELEAER 617

Query: 646 AAIVEA-HRPDDDFSVSETNTSS-FTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
           A + +   + D+  +V     S   +P   + G+ V V S+  K  TV  +P     + V
Sbjct: 618 ARLRDQLKKTDEKLAVKPKGPSQPISPKKLKIGDGVKVLSMNLK-GTVSTLPNAKGDLYV 676

Query: 701 QYGKMRVRVKKNNIRPI 717
           Q G +R  V   NIR +
Sbjct: 677 QMGILRSLV---NIRDL 690


>gi|413933872|gb|AFW68423.1| hypothetical protein ZEAMMB73_052095, partial [Zea mays]
          Length = 859

 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 230/781 (29%), Positives = 372/781 (47%), Gaps = 111/781 (14%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIA--GILNSAVSGQLLSPSEICAVRRT 71
           S E+SQ LL +T AA+ ++ +    +D S ++ +A    ++S   G ++   E  AV   
Sbjct: 85  SYEQSQMLLQETEAAVLLLDNAGGAMDFSGLDTVAIESAIHSVSGGAVIKGLEAMAVTSL 144

Query: 72  LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           +  V ++   +  A +LD  S  R + L E + +      L + I   +D     + D A
Sbjct: 145 MMFVESLQVNIKAAMKLDEGSCSRLTTLTETILDAVINKSLVKSIQDIVDDDG-SVKDTA 203

Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
           S +L   R + +R    L  L+ K+         + +  I     R C+     +     
Sbjct: 204 SPELRRYREQVQRLENRLYQLMDKLMRNADDEASLSEVCIVN--GRCCIRTTMDNSSFF- 260

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKY 250
           DG+ L+ S S A   +EP  AV  N+ E++ S + +A+ E  +LS LT +I      I+ 
Sbjct: 261 DGLLLS-SRSDAGSMIEPIVAVPLND-ELQESRALVAKAELDVLSKLTDKIRLDLDSIQN 318

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILS----SQSHVSFDSSINIEGIK---------- 296
           L+   +++D   ARA ++   DG  P L         V+  +  +I+ I           
Sbjct: 319 LLQETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSATGGSIKQISSAQLPKKAWK 378

Query: 297 -------HPLLL-------GSSLRSLSAASSN-------------SNPLKSDVENSEMTV 329
                  HPLLL         + R +++A++               + L SD+++ ++ V
Sbjct: 379 LYMPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQDIAEEDQLASDLDSMKLRV 438

Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA--------- 380
             L K   D PVP+D  +  ET V+VITGPNTGGKT S+KT+GLASLM+K          
Sbjct: 439 SQLEK---DQPVPVDFMIAEETTVLVITGPNTGGKTISLKTVGLASLMAKIVAKLAAVVT 495

Query: 381 ---------------GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
                          GLY+ A    ++PWF+ + ADIGD QSL Q+LSTFSGH+ +I  I
Sbjct: 496 VVVSCRLLVADGATLGLYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAI 555

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDK-- 482
               + ESLVL+DE+G+GT+P EG AL  S+L+   +    L + TTH+ +L  LK +  
Sbjct: 556 RAESTSESLVLLDEVGAGTNPLEGAALGMSLLESFAEAGSFLTLATTHHGELKTLKYRLH 615

Query: 483 ----DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL---- 534
               +  FENA  EF  E L+PT++ILWG  G SNA+NI + +G    I++ +++L    
Sbjct: 616 FFLHNNSFENACMEFDEENLKPTFKILWGIPGRSNAINITERLGLPLDIVESSRRLLGTA 675

Query: 535 ----------VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 584
                     +ERL+ E QQH +   Y  L+ + ++L +    A     +     R  + 
Sbjct: 676 GAEINALIMDMERLKQEYQQHLQEAQY--LLMQSKELHNNLELAQKSIVDHTSAQR--KR 731

Query: 585 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 644
           +A+ +   A   ++   ++ QQ   F +  I   V++ EN + DA +D +   +  + SA
Sbjct: 732 KARVISEYAVMARSIIRKKFQQ---FQESAIAERVKEEENAVNDAKSDRVKDPMPANTSA 788

Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
           I  I      D    ++  +     P+ G+ V+V  L ++ ATVV++    + V VQ G 
Sbjct: 789 IGNI---QNIDTSLGMTANDDEDEVPEVGDSVYVPKLKNE-ATVVKIDSSKNEVQVQAGM 844

Query: 705 M 705
           M
Sbjct: 845 M 845


>gi|347534558|ref|YP_004841228.1| MutS2 protein [Lactobacillus sanfranciscensis TMW 1.1304]
 gi|345504614|gb|AEN99296.1| MutS2 protein [Lactobacillus sanfranciscensis TMW 1.1304]
          Length = 785

 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 204/689 (29%), Positives = 335/689 (48%), Gaps = 77/689 (11%)

Query: 63  SEICAVRRTLRAVNNVWKKL-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
           +++ AV   +  +N  ++ L TE  EL          L E +K  + L E+  ++   +D
Sbjct: 90  AQVSAVLNAILVINRFFENLETEKVEL--------HVLYEEVKTFSNLPEITVQLKKSVD 141

Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
               I LD AS  L  IR +  R   N+ S ++       Q+  +  P+IT R  R  + 
Sbjct: 142 DSGKI-LDSASGTLSSIRRQISRLEGNIKSKMESFT-HGKQSKYLSDPIITIRDDRYVIP 199

Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
           +KA +K  +  GI  + S+SG T ++EP   V  NN   R   +E  EE  IL+ L+  I
Sbjct: 200 VKAEYKQKI-GGIVHDQSTSGQTIYLEPASVVGLNNDLRREQINEREEEKRILAQLSDLI 258

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
              + E+     ++   DL  A+A +A  M    P       +S D+ +N++  +HPL+ 
Sbjct: 259 RPYQMELLSNAKQLGHFDLINAKARYAASMKATRP------EISADNQVNLKNARHPLI- 311

Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
                                 N E  VG+            DIK+  + R ++ITGPNT
Sbjct: 312 ----------------------NQEKVVGN------------DIKLGFDYRQIIITGPNT 337

Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
           GGKT +MKTLGL  LM+++GL++ A    +   +D + ADIGD QS+EQNLSTFS HI  
Sbjct: 338 GGKTITMKTLGLLQLMAQSGLFITADEGSQAGLYDEVFADIGDDQSIEQNLSTFSSHIDN 397

Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
           I+ IL+ ++  SLVLIDE+G+GTDP EG ALA SIL  +       + TTHY +L     
Sbjct: 398 IISILKRMTNRSLVLIDELGAGTDPREGAALAMSILDAISQSDAEVLSTTHYPELKVYGY 457

Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER---- 537
                 NA+ EF  +TL PTYR++ G  G SNAL+IA  +G +  II  A+ LV+     
Sbjct: 458 NRPETINASMEFDEKTLSPTYRLMIGIPGQSNALSIAGRLGLNESIIMEAESLVDEDSQD 517

Query: 538 ----LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
               ++   QQ + ++      +  RKLE + +    LH E+ + + +        +RR 
Sbjct: 518 INSMIKKLTQQTKAAD------DRARKLEVELKIVTELHQELTEKFNQF------TERRD 565

Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
           A +  K  +   Q ++  K Q + ++ D   + ++A+ D   + + E +  I A+ E H 
Sbjct: 566 AMIN-KAKRDANQIVSRTKRQANEIIDDLHKRQKNAAIDVKENELIEQKGKINAL-EQHT 623

Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
              +  V + + +  + + G+ V VK+ G +   + ++   + +  V+ G ++++V + +
Sbjct: 624 ELKNNKVLKRSKAKKSFKVGDDVLVKTYGQRGVLLKKI--GNHSWEVELGILKMKVDETD 681

Query: 714 IRPIPNSKRKNAANPAPRLRKQVCTCTSL 742
           +  +   K K+ A       +   T  +L
Sbjct: 682 MDRVKEEKPKHRAQTVVHRTRSSSTSPTL 710


>gi|345023410|ref|ZP_08787023.1| DNA mismatch repair protein [Ornithinibacillus scapharcae TW25]
          Length = 779

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 184/526 (34%), Positives = 266/526 (50%), Gaps = 63/526 (11%)

Query: 16  SLEESQKLLNQTS-AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           +LEE  +L  +T  AAL +  + P+ L  I DI   L  AV G +LS SE   +  T+  
Sbjct: 39  NLEEVNQLQEETDEAALVIRLNVPVPLGGIFDIRESLKRAVIGGVLSTSECLDIANTIYG 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
              V K   E        L    P+L+ L+++   L +LE +I  CID    + +D A+E
Sbjct: 99  GRQV-KDFVEG-------LDEELPILKGLVESITPLRDLELEIKSCIDDHGHV-MDSATE 149

Query: 134 DLELIRA----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L  IR+       R  E L+S  +  +  +  A      +IT R  R  + +K  ++  
Sbjct: 150 KLRGIRSSIRTHESRVREKLESYTRTKSNMLSDA------IITIRNDRYVIPVKHEYRGA 203

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
           +  GI  + S+SG T FMEPK  V+ NN    L   E  E   IL  L+  IA+ E  + 
Sbjct: 204 I-GGIVHDQSASGQTLFMEPKAVVDLNNQLQELYAREKQEIERILRELSHRIAEDEGFLS 262

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
             +  +  ID  FARA   + M    P ++ Q        I ++  +HPL+         
Sbjct: 263 ENIRILASIDFIFARANLGRAMKAARPAMNDQG------IIKMQQARHPLI--------- 307

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                         N E  V +            DI++  +   +VITGPNTGGKT ++K
Sbjct: 308 --------------NIEDVVAN------------DIEIGRDYTTIVITGPNTGGKTVTLK 341

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
            +GL +LM+++GL +PA +   +  F+ + ADIGD QS+EQNLSTFS H++ IVDIL+ V
Sbjct: 342 MVGLCTLMAQSGLQVPALDGCEMAVFEHVFADIGDEQSIEQNLSTFSSHMTNIVDILKHV 401

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
              +LVL DE+G+GTDP EG ALA +IL  +  R    + TTHY +L           NA
Sbjct: 402 DDRTLVLFDELGAGTDPQEGAALAMAILDEVVSRRARVIATTHYPELKAYGYNREDVINA 461

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           + EF ++TL+PTYR+L G  G SNA +I+K +G D  II RA+  V
Sbjct: 462 SMEFDVQTLQPTYRLLIGVPGRSNAFDISKRLGLDEFIIDRAKSHV 507


>gi|217967690|ref|YP_002353196.1| MutS2 family protein [Dictyoglomus turgidum DSM 6724]
 gi|217336789|gb|ACK42582.1| MutS2 family protein [Dictyoglomus turgidum DSM 6724]
          Length = 778

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 203/704 (28%), Positives = 349/704 (49%), Gaps = 86/704 (12%)

Query: 23  LLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LLN+ +         P   S I +I   ++ A  G ++ P E   + +TL     VW KL
Sbjct: 47  LLNEEAFKTIYSFGYP-SFSGIRNIEIYIDKAEKGGIVYPDEFEEIVKTL----EVWGKL 101

Query: 83  TEAAELDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
            +  E     +++ +P   L KN  + L +L  +I  C+    +I  D AS +L+ IR +
Sbjct: 102 RDYQE----KVRKTAP--NLWKNTLHNLHDLYIQIRKCVQDGAVI--DSASPELKQIRQK 153

Query: 142 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 201
           ++R  + +   L+ +  + ++ G +   +IT R  R  V ++   +  +  GI  + S+S
Sbjct: 154 KERLNQKVRETLENIIQKEWR-GYLQDQIITIRHGRYVVPVRQEFRGKI-QGIVHDQSTS 211

Query: 202 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 261
           G T ++EP+  VE NN    L + E  E   IL+ LT+ +   + EI   +    E+D  
Sbjct: 212 GLTVYVEPQVIVELNNQIALLESEEKREIERILTRLTSVLLSYKEEILENLRTSFELDFV 271

Query: 262 FARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 321
           +A+  +A+    + PIL     +     + +   +HP L                     
Sbjct: 272 YAKVKWAEKYKAITPILEKDKPI-----VILREARHPFL--------------------- 305

Query: 322 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 381
                           D  VPI ++V      +VITGPNTGGKT ++KT+GL  L+++AG
Sbjct: 306 ---------------GDKAVPITLEVGRYFHTLVITGPNTGGKTVTLKTIGLFVLLNQAG 350

Query: 382 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR----ESLVLI 437
           + +PAK    L  F+ + ADIGD QS+EQNLSTFS H++ I+  ++ + R    + LVLI
Sbjct: 351 IPVPAKEGTTLGIFNQVFADIGDEQSIEQNLSTFSSHMTNIISFIDYLERTGDKKVLVLI 410

Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
           DE+G+GTDP EG ALA ++L+Y  ++  + V+ THY  L  +  K    ENA+ EF   +
Sbjct: 411 DELGAGTDPQEGAALAVALLEYFHEKGTINVIATHYPQLKVIASKYPGMENASMEFDEIS 470

Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 557
           LRP Y++  G  G SNA+ I+K +G  RKI+ RA  L+        + +  E+   L ++
Sbjct: 471 LRPLYKVAMGIPGKSNAILISKRLGLPRKILDRAVSLL-----SENEIKLEEVIGELQKD 525

Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
           RRK + +      +  E+ +  + I +E + L++    LK K  +++ ++++  + ++  
Sbjct: 526 RRKYQEEIDKINKVKKELQEEKKRILEEREILEKEKEKLKTKYKEELFKDISKIENRLKE 585

Query: 618 VVQDFENQ---LRDASA--DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
           +++  + +   ++DA +  +E+  L KE       +V   R        E    S+ PQ 
Sbjct: 586 IIRRLQEESLSMKDAQSLQEEVKKLKKE-------LVLEER-------EEPKALSYVPQV 631

Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
           G++V ++S   K   V+EV  D+   LVQ G ++++V    + P
Sbjct: 632 GDRVVLRST-KKEGYVIEVDADEKIALVQVGLLKIKVPWTELAP 674


>gi|227524346|ref|ZP_03954395.1| MutS family DNA mismatch repair protein [Lactobacillus hilgardii
           ATCC 8290]
 gi|227088577|gb|EEI23889.1| MutS family DNA mismatch repair protein [Lactobacillus hilgardii
           ATCC 8290]
          Length = 788

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 208/690 (30%), Positives = 331/690 (47%), Gaps = 91/690 (13%)

Query: 50  ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
           I N+++SG  LS   I  + R +R +N+ +           D     + + +++     +
Sbjct: 80  IENASLSGTELS--HITKLLRAVRTINDFFDNFQ-------DEDVNLTVVSQIVSQLTLM 130

Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
            E+ +++   I+     ILD AS +L  IR    R   ++ S + K     +  G   K 
Sbjct: 131 PEITKRMVQSINEDG-SILDTASSELRTIRRTINRTQNDIRSRIGK-----YLKGSDSKY 184

Query: 170 L----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
           L    IT R  R  + I+A +K     GI  + S+SG T ++EP   VE NN   R   +
Sbjct: 185 LTESIITMREDRFVLPIRADYKQHFG-GIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLA 243

Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
           E AEE  IL+ LT  I     E+   M+ V ++D   A+A FA  +  V P       +S
Sbjct: 244 ERAEERRILAELTDLIRPYRSELLNNMNLVGQLDFVNAKAKFAHQIRAVQP------EIS 297

Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
            D+ +N+   +HPL+                                     D  V  DI
Sbjct: 298 RDNVVNLRQARHPLI-----------------------------------ARDKVVANDI 322

Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
           ++  E R ++ITGPNTGGKT ++KT+GL  LM ++GL++ A    ++  FD + ADIGD 
Sbjct: 323 QIGDEYRTIIITGPNTGGKTITLKTVGLLQLMGQSGLFITANEESQIGVFDDVFADIGDD 382

Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
           QS+E NLSTFS H+  I+ IL  +S +SL+L+DE+G+GTDP EG ALA +I+  +     
Sbjct: 383 QSIEANLSTFSSHMDNIISILNGMSSQSLILLDELGAGTDPKEGAALAMAIIDAIHQSGC 442

Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
             + TTHY +L       +   NA+ EF +ETLRPTYR L G  G SNALNIA  +G  +
Sbjct: 443 ELIATTHYPELKAYAYNRSGIINASMEFDIETLRPTYRFLMGIPGQSNALNIASKLGLSK 502

Query: 526 KIIQRAQKLVERLRPERQ--QHRKSEL---YQSLMEERRKLESQARTAASLHAEIMDLYR 580
            II++A+   +    E Q   +   EL    +   +E  +L+ Q   +  LH ++ + + 
Sbjct: 503 GIIEKARAFTD---SENQDINNMIDELTAQTKRAHDEADQLDEQLTDSTKLHDDLQNQFT 559

Query: 581 EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKE 640
           + +++ KD      HL  +  +Q  Q +  AK+  D ++ D   + +        S IKE
Sbjct: 560 QYQNQ-KD------HLLEQAREQANQVVEKAKISADKIIADLHKKQQQVG----QSAIKE 608

Query: 641 SE--SAIAAI----VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 694
           +E   A  A+    V  +   +     E     F P  G++V VKS G +   + +    
Sbjct: 609 NELIDAKGALNRLEVTPNLKKNKVLRKEKAKHDFHP--GDEVLVKSYGQQGTLIRQEK-- 664

Query: 695 DDTVLVQYGKMRVRVKKNNI-RPIPNSKRK 723
           +    VQ G +++++ +N++ +  P  K K
Sbjct: 665 NGAWEVQLGILKMQIDENDLEKAAPEKKAK 694


>gi|429506149|ref|YP_007187333.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           amyloliquefaciens subsp. plantarum AS43.3]
 gi|429487739|gb|AFZ91663.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           amyloliquefaciens subsp. plantarum AS43.3]
          Length = 785

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 212/722 (29%), Positives = 356/722 (49%), Gaps = 79/722 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L + QK L++   A A+M+ +       + DI   L  A  G +L+P+E   +   L AV
Sbjct: 40  LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             +   +++  E DG  +    PL++   +    L +LE +I  CID    + LD AS  
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153

Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++   
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT   A+  +EI  
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            ++ +  +D  FA+A +A+ M    P+++       D  I ++  +HPLL          
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P    V N                   DI++  +   +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL ++M++AGL++PA        FD + ADIGD QS+EQ+LSTFS H+  IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETL PTY++L G  G SNA  I++ +G    II +A+  +        +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521

Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
              SL + +++ + +     S+  E   L++E++ +  +L+ +   +  +  Q+  ++L 
Sbjct: 522 MIASLEKSKKRADEELSETESIRKEAEKLHKELQQQIIELNAQKDKMMEEAEQKAAEKLE 581

Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            A  + + ++++    + + R     E+    K    A+ A  ++ +P+           
Sbjct: 582 AAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTE----KKR 637

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN---IRPIPNSKRK 723
              P  G++V V + G K A ++E  G+ +   VQ G ++++VK+ +   ++  P  K++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSAPEPKKE 693

Query: 724 NA 725
            A
Sbjct: 694 KA 695


>gi|423411664|ref|ZP_17388784.1| MutS2 protein [Bacillus cereus BAG3O-2]
 gi|423432549|ref|ZP_17409553.1| MutS2 protein [Bacillus cereus BAG4O-1]
 gi|401104989|gb|EJQ12957.1| MutS2 protein [Bacillus cereus BAG3O-2]
 gi|401115682|gb|EJQ23529.1| MutS2 protein [Bacillus cereus BAG4O-1]
          Length = 786

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 213/722 (29%), Positives = 354/722 (49%), Gaps = 93/722 (12%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMADNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
           I  + S+SG T F+EP+  VE NN   E R+   +  E   IL +LT E+A     +   
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEVER--ILLMLTEEVAVEADIVLSN 269

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
           ++ V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+           
Sbjct: 270 VEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI----------- 312

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
               +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+
Sbjct: 313 ----DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTV 348

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
           G+  LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    
Sbjct: 349 GICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADF 408

Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
           ESLVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ 
Sbjct: 409 ESLVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASV 468

Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
           EF + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   + 
Sbjct: 469 EFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMI 523

Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELN 609
             L E ++  E     A +L  +   L+RE++ +  +   DR    LKA+  ++ ++++ 
Sbjct: 524 AKLEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVE 581

Query: 610 FAKVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETN 664
            AK + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N
Sbjct: 582 AAKKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VN 631

Query: 665 TSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
             +  P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   
Sbjct: 632 VKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP 689

Query: 721 KR 722
           K+
Sbjct: 690 KQ 691


>gi|206969500|ref|ZP_03230454.1| MutS2 family protein [Bacillus cereus AH1134]
 gi|229072054|ref|ZP_04205263.1| hypothetical protein bcere0025_42200 [Bacillus cereus F65185]
 gi|229081805|ref|ZP_04214297.1| hypothetical protein bcere0023_44330 [Bacillus cereus Rock4-2]
 gi|229180871|ref|ZP_04308206.1| hypothetical protein bcere0005_42150 [Bacillus cereus 172560W]
 gi|229192752|ref|ZP_04319710.1| hypothetical protein bcere0002_44030 [Bacillus cereus ATCC 10876]
 gi|365158667|ref|ZP_09354859.1| MutS2 protein [Bacillus sp. 7_6_55CFAA_CT2]
 gi|206735188|gb|EDZ52356.1| MutS2 family protein [Bacillus cereus AH1134]
 gi|228590591|gb|EEK48452.1| hypothetical protein bcere0002_44030 [Bacillus cereus ATCC 10876]
 gi|228602428|gb|EEK59914.1| hypothetical protein bcere0005_42150 [Bacillus cereus 172560W]
 gi|228701393|gb|EEL53887.1| hypothetical protein bcere0023_44330 [Bacillus cereus Rock4-2]
 gi|228710988|gb|EEL62954.1| hypothetical protein bcere0025_42200 [Bacillus cereus F65185]
 gi|363626540|gb|EHL77523.1| MutS2 protein [Bacillus sp. 7_6_55CFAA_CT2]
          Length = 786

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 212/722 (29%), Positives = 356/722 (49%), Gaps = 93/722 (12%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            + + + A+ +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
           I  + S+SG T F+EP+  VE NN   E R+   +  E   IL +LT E+A     +   
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEVER--ILLMLTEEVAVEADIVLSN 269

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
           ++ V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+           
Sbjct: 270 VEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI----------- 312

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
               +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+
Sbjct: 313 ----DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTV 348

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
           G+  LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    
Sbjct: 349 GICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADF 408

Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
           ESLVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ 
Sbjct: 409 ESLVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASV 468

Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
           EF + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   + 
Sbjct: 469 EFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMI 523

Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELN 609
             L E ++  E     A +L  +   L+RE++ +  +   DR    LKA+  ++ ++++ 
Sbjct: 524 AKLEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVE 581

Query: 610 FAKVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETN 664
            AK + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N
Sbjct: 582 AAKKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VN 631

Query: 665 TSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
             +  P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   
Sbjct: 632 VKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP 689

Query: 721 KR 722
           K+
Sbjct: 690 KQ 691


>gi|332686481|ref|YP_004456255.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
           ATCC 35311]
 gi|332370490|dbj|BAK21446.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
           ATCC 35311]
          Length = 789

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 193/631 (30%), Positives = 312/631 (49%), Gaps = 76/631 (12%)

Query: 18  EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           E+ Q  LN+T   L + Q    + +  + DI   +     G  L+  E+  + R L   +
Sbjct: 41  EQIQLWLNETKDGLKIQQLCNGIPIPKLVDIHSHMKRLQIGANLNGLELSQIGRILTTTS 100

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
            V+    E  E + +    Y+ + +L+     L+ L  +I   I  +   + D AS +L+
Sbjct: 101 EVYHFFDELRENEIEFYNLYTWIDQLV----ILSSLTRQIKVAI-TEDGAVTDEASPELK 155

Query: 137 LIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
            IR    +N     E L+ L++   A+      +   +IT R  R  + +K  HK     
Sbjct: 156 NIRQMIHKNERAVREKLEELIRGKNARY-----LSDSIITMRNERYVIPVKQEHKNTF-G 209

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           G+  + S+SG T F+EPK  VE NN   +L  +E  E   IL+ L+AE+A   +EI    
Sbjct: 210 GVVHDQSASGQTLFIEPKQIVELNNHLRQLQIAERTEINRILAELSAELAPYYKEILRNA 269

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
           + +  +D   A+A F + +  + P ++ ++H+    +      +HPLL            
Sbjct: 270 EIIGTLDFINAKADFGKNLKAIVPKINEKNHIFLKQA------RHPLL------------ 311

Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
                                K +S+     DI +  + + +VITGPNTGGKT ++KT+G
Sbjct: 312 ------------------DHDKAVSN-----DITIGEDYQTIVITGPNTGGKTITLKTIG 348

Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
           L  LM ++GL +P  ++ ++  F  I ADIGD QS+EQNLSTFS H++ IV I+E V + 
Sbjct: 349 LLQLMGQSGLPIPVNDNSQIGIFKEIFADIGDEQSIEQNLSTFSSHMTNIVSIIEKVDKN 408

Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
           SLVL+DE+G+GTDP EG ALA SIL  L  +    + TTHY +L       +   NA+ E
Sbjct: 409 SLVLLDELGAGTDPQEGAALAISILDALNTKQAYTIATTHYPELKIYGYNRSGTINASME 468

Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
           F+++TL PTYR+L G  G SNA +I+K +G + KII  A++++     E      +E+  
Sbjct: 469 FNIDTLSPTYRLLIGVPGRSNAFDISKRLGLNTKIIDEARQIMNGDSQEL-----NEMIA 523

Query: 553 SLMEERRKLESQAR-------TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
            L   R+  E++ +        A  L  E+ ++YR +  E ++   +A        ++ Q
Sbjct: 524 DLENRRKMAETEYKEARYFLNEAEQLQTELKEVYRYLHQERENEMEKANKQANSIVKKAQ 583

Query: 606 QELN-----FAKVQIDTVVQDF--ENQLRDA 629
           +E +       K+Q++T  Q    E+QL DA
Sbjct: 584 EEADAIIKEIRKMQLNTNQQTTIKEHQLIDA 614


>gi|227513131|ref|ZP_03943180.1| MutS family DNA mismatch repair protein [Lactobacillus buchneri
           ATCC 11577]
 gi|227083706|gb|EEI19018.1| MutS family DNA mismatch repair protein [Lactobacillus buchneri
           ATCC 11577]
          Length = 788

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 207/690 (30%), Positives = 331/690 (47%), Gaps = 91/690 (13%)

Query: 50  ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
           I N+++SG  LS   I  + R +R +N+ +           D     + + +++     +
Sbjct: 80  IENASLSGTELS--HITKLLRAVRTINDFFDNFQ-------DEDVNLTVVSQIVSQLTLM 130

Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
            E+ +++   I+     ILD AS +L  IR    R   ++ S + K     +  G   K 
Sbjct: 131 PEITKRMVQSINEDG-SILDTASSELRTIRRTINRTQNDIRSRMGK-----YLKGSDSKY 184

Query: 170 L----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
           L    IT R  R  + I+A +K     GI  + S+SG T ++EP   VE NN   R   +
Sbjct: 185 LTESIITMREDRFVLPIRADYKQHFG-GIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLA 243

Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
           E AEE  IL+ LT  I     E+   M+ V ++D   A+A FA  +  V P       +S
Sbjct: 244 ERAEERRILAELTDLIRPYRSELLNNMNLVGQLDFVNAKAKFAHQIRAVQP------EIS 297

Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
            D+ +N+   +HPL+    +                                   V  DI
Sbjct: 298 RDNVVNLRQARHPLIARGKV-----------------------------------VANDI 322

Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
           ++  E R ++ITGPNTGGKT ++KT+GL  LM ++GL++ A    ++  FD + ADIGD 
Sbjct: 323 QIGDEYRTIIITGPNTGGKTITLKTVGLLQLMGQSGLFITANEESQIGVFDDVFADIGDD 382

Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
           QS+E NLSTFS H+  I+ IL  +S +SL+L+DE+G+GTDP EG ALA +I+  +     
Sbjct: 383 QSIEANLSTFSSHMDNIISILNGMSSQSLILLDELGAGTDPKEGAALAMAIIDAIHQSGC 442

Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
             + TTHY +L       +   NA+ EF +ETLRPTYR L G  G SNALNIA  +G  +
Sbjct: 443 ELIATTHYPELKAYAYNRSGIINASMEFDIETLRPTYRFLMGIPGQSNALNIASKLGLSK 502

Query: 526 KIIQRAQKLVERLRPERQ--QHRKSEL---YQSLMEERRKLESQARTAASLHAEIMDLYR 580
            II++A+   +    E Q   +   EL    +   +E  +L+ Q   +  LH ++ + + 
Sbjct: 503 GIIEKARAFTD---SENQDINNMIDELTAQTKRAHDEADQLDEQLTDSTKLHDDLQNQFT 559

Query: 581 EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKE 640
           + +++ KD      HL  +  +Q  Q +  AK+  D ++ D   + +        S IKE
Sbjct: 560 QYQNQ-KD------HLLEQAREQANQVVEKAKISADKIIADLHKKQQQVG----QSAIKE 608

Query: 641 SE--SAIAAI----VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 694
           +E   A  A+    V  +   +     E     F P  G++V VKS G +   + +    
Sbjct: 609 NELIDAKGALNRLEVTPNLKKNKVLRKEKAKHDFHP--GDEVLVKSYGQQGTLIRQEK-- 664

Query: 695 DDTVLVQYGKMRVRVKKNNI-RPIPNSKRK 723
           +    VQ G +++++ +N++ +  P  K K
Sbjct: 665 NGAWEVQLGILKMQIDENDLEKAAPEKKAK 694


>gi|188586428|ref|YP_001917973.1| MutS2 family protein [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179351115|gb|ACB85385.1| MutS2 family protein [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 796

 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 208/709 (29%), Positives = 346/709 (48%), Gaps = 90/709 (12%)

Query: 24  LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT 83
           L +TS A  ++  + + L  + DI   L  A     L   E+  +   +  V+N  +K+T
Sbjct: 48  LKETSEAKELLAERDISLRGLRDIRKQLQLAAKDGTLQGPELFQISEII-GVSNRVRKIT 106

Query: 84  EAAELDGDSLQRYSPLLE----LLKNCNFLT-ELEEKIGFCIDCKLLIILDRASEDLELI 138
           +      D+ Q   P+L      L   N L  EL++KI    + K     D AS +L  I
Sbjct: 107 D------DNFQANYPILSSLISKLPELNHLKKELDDKIDENGEVK-----DSASVNLRNI 155

Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
           R + K+    L S +K    +I Q+G   +   ++T R  R  V +KA ++ ++P GI  
Sbjct: 156 RQKIKK----LQSQVKTSVNRILQSGEKYLQDKIVTMRYDRYVVPVKAEYQNMVP-GIIH 210

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + SSSG T ++EPK  VE NN   +    E +E   IL  L+ +I     ++   +  ++
Sbjct: 211 DQSSSGMTVYIEPKEVVEKNNELRQAKREEHSELEKILQGLSQKIKGYHYQLHDSLQILV 270

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           E+D   A+   ++ M+     L+ +  +       I+G KHPLL                
Sbjct: 271 ELDFILAKGSLSRRMNAREAELNQEKRLEI-----IKG-KHPLL---------------- 308

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                                +  +P+D+K+  E   +VITGPNTGGKT S+K +GL +L
Sbjct: 309 --------------------GEDAIPVDVKLGDEFNTMVITGPNTGGKTVSLKMVGLFTL 348

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+++GL++PA+    +  F+ + ADIGD Q +EQ+LSTFS H+S IV I++  + ESL+L
Sbjct: 349 MTQSGLHIPAERGTEMGVFEQVFADIGDEQDIEQSLSTFSSHMSNIVKIVDHANSESLIL 408

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
           +DE+G+GTDP+EG ALA S+L++  +    ++ TTHY  L          ENA+ EF  E
Sbjct: 409 LDELGAGTDPTEGSALAMSLLEHFHNLGCRSIATTHYTQLKSFAHAREGVENASVEFDEE 468

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
           TL PTY +L G  G SNA  I++ +G   KII  A+  +  E +  E       EL  SL
Sbjct: 469 TLEPTYNLLIGVPGKSNAFVISRRLGLSDKIISNAKSFLADEEIEVE-------ELITSL 521

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
            E+ +  +          A++  +  ++E E K++ R+   +  K  +Q ++ ++ AK  
Sbjct: 522 TEKEKSSQKMKEELERERAKVEQVKAQLEQERKEISRKKDEVLQKARRQAEEIISDAK-- 579

Query: 615 IDTVVQDFENQLRDA---SADEINSLIKESESAIAAIVEAHRPD-DDFSVSETNTSSFTP 670
                +D E  L++A   +  + +  + E  S +   +  H+    +  +   ++   +P
Sbjct: 580 -----RDAEESLKEARKIAEKKSHKEMAEVSSKVRDKLSGHQQKLREELMDSADSVPLSP 634

Query: 671 QF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
           +    G  V++ +L DK   +++V  D     VQ G M+V V  ++I P
Sbjct: 635 EKLKPGLTVYISNL-DKEGQILQVNHDKGEAEVQVGIMKVNVNFSDIFP 682


>gi|379727500|ref|YP_005319685.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
           DAT561]
 gi|376318403|dbj|BAL62190.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
           DAT561]
          Length = 789

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 194/631 (30%), Positives = 314/631 (49%), Gaps = 76/631 (12%)

Query: 18  EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           E+ Q  LN+T   L + Q    + +  + DI   +     G  L+  E+  + R L   +
Sbjct: 41  EQIQLWLNETKDGLKIQQLCNGIPIPKLVDIHSHMKRLQIGANLNGLELSQIGRILTTTS 100

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
            V+    E  E + +    Y+ + +L+     L+ L  +I   I  +   + D AS +L+
Sbjct: 101 EVYHFFDELRENEIEFYNLYTWIDQLV----ILSSLTRQIKVAI-TEDGAVTDEASPELK 155

Query: 137 LIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
            IR    +N     E L+ L++   A+      +   +IT R  R  + +K  HK     
Sbjct: 156 NIRQMIHKNERAVREKLEELIRGKNARY-----LSDSIITMRNERYVIPVKQEHKNTF-G 209

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           G+  + S+SG T F+EPK  VE NN   +L  +E  E   IL+ L+AE+A   +EI    
Sbjct: 210 GVVHDQSASGQTLFIEPKQIVELNNHLRQLQIAERTEINRILAELSAELAPYYKEILRNA 269

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
           + +  +D   A+A F + +  + P ++ ++H+    +      +HPLL            
Sbjct: 270 EIIGTLDFINAKADFGKNLKAIVPKINEKNHIFLKQA------RHPLL------------ 311

Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
                                K +S+     DI +  + + +VITGPNTGGKT ++KT+G
Sbjct: 312 ------------------DHDKAVSN-----DITIGEDYQTIVITGPNTGGKTITLKTIG 348

Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
           L  LM ++GL +P  ++ ++  F  I ADIGD QS+EQNLSTFS H++ IV I+E V + 
Sbjct: 349 LLQLMGQSGLPIPVNDNSQIGIFKEIFADIGDEQSIEQNLSTFSSHMTNIVSIIEKVDKN 408

Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
           SLVL+DE+G+GTDP EG ALA SIL  L  +    + TTHY +L       +   NA+ E
Sbjct: 409 SLVLLDELGAGTDPQEGAALAISILDALNTKQAYTIATTHYPELKIYGYNRSGTINASME 468

Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
           F+++TL PTYR+L G  G SNA +I+K +G + KII  A++++     E      +E+  
Sbjct: 469 FNIDTLSPTYRLLIGVPGRSNAFDISKRLGLNTKIIDEARQIMNGDSQEL-----NEMIA 523

Query: 553 SLMEERRKLESQAR-------TAASLHAEIMDLYR----EIEDEAKDLDRRAAHLKAKET 601
            L   R+  E++ +        A  L  E+ ++YR    E E+E +  +++A  +  K  
Sbjct: 524 DLENRRKMAETEYKEARYFLNEAEQLQTELKEVYRYFHQERENEMEKANKQANSIVKKAQ 583

Query: 602 QQVQQELN-FAKVQIDTVVQDF--ENQLRDA 629
           ++    +    K+Q++T  Q    E+QL DA
Sbjct: 584 EEADAIIKEIRKMQLNTNQQTTIKEHQLIDA 614


>gi|225571366|ref|ZP_03780362.1| hypothetical protein CLOHYLEM_07464 [Clostridium hylemonae DSM
           15053]
 gi|225159842|gb|EEG72461.1| hypothetical protein CLOHYLEM_07464 [Clostridium hylemonae DSM
           15053]
          Length = 791

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 189/568 (33%), Positives = 280/568 (49%), Gaps = 87/568 (15%)

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           P+IT R  R C+ +KA H+  +  G+  + SS+G+T F+EP   V+ NN    L   E  
Sbjct: 186 PIITMRGDRYCIPVKAEHRGHV-QGLIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ L+AE A+  + I+     + E+D  FA+   A  M+   P+ +++       
Sbjct: 245 EIQVILARLSAETAEHIQTIRTNCTVLTELDFIFAKGSLALDMNASMPLFNTEGR----- 299

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
            I+I   +HPLL                         + TV           VPI I + 
Sbjct: 300 -IHIREGRHPLL------------------------DKHTV-----------VPITITLG 323

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
               ++++TGPNTGGKT S+KT+GL +LM +AGL++PA +   L  F  + ADIGD QS+
Sbjct: 324 DTFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELSVFHDVYADIGDEQSI 383

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQ+LSTFS H++ IV  L+ V   SL+L DE+G+GTDP+EG ALA SIL +L +R    +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKQVDEHSLILFDELGAGTDPTEGAALAISILNHLHERGIRTM 443

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L          ENA  EF LETLRPTY +L G  G SNA  IA  +G    II
Sbjct: 444 ATTHYSELKVYALTTPGVENACCEFDLETLRPTYHLLIGIPGKSNAFAIAGKLGLPSYII 503

Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DE 585
           + A+         R    + E ++ L+ +   LE+  RT     AEI    RE+E   DE
Sbjct: 504 EEAK---------RHLSEQDESFEDLLAD---LEANRRTIEKEQAEIASYRRELERLKDE 551

Query: 586 A----KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD--ASAD---EINS 636
           A    K LD +   +  +  ++    L  AK   D  +++F    ++  ++AD   E   
Sbjct: 552 ASQKQKKLDEQKERILREANEKAHAILAEAKDVADETMRNFHKFGKENISAADMERERER 611

Query: 637 LIKESESAIAAI-------VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
           L K+  S  + +        + H+P D              + GE V V S+ +   TV 
Sbjct: 612 LRKKMASTASGMDRQVKKPQKQHKPGD-------------FKLGESVKVLSM-NLTGTVN 657

Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
            +P     V VQ G +R +V  +++  I
Sbjct: 658 SLPDAKGNVTVQMGILRSQVNISDLEII 685


>gi|256965209|ref|ZP_05569380.1| MutS 2 protein [Enterococcus faecalis HIP11704]
 gi|307273312|ref|ZP_07554558.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0855]
 gi|256955705|gb|EEU72337.1| MutS 2 protein [Enterococcus faecalis HIP11704]
 gi|306510297|gb|EFM79321.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0855]
          Length = 788

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|422728993|ref|ZP_16785399.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0012]
 gi|315150623|gb|EFT94639.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0012]
          Length = 788

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 197/608 (32%), Positives = 305/608 (50%), Gaps = 94/608 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA---VN 76
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L     + 
Sbjct: 44  QAWLNETQDGLKVHRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTLELT 103

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
             + +L+E  E+D + L  +   LE+L       EL  ++   ID    +  D AS  L+
Sbjct: 104 RFFDELSEN-EVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALK 155

Query: 137 LIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
            IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   
Sbjct: 156 AIRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-G 209

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIK 249
           G+  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI 
Sbjct: 210 GVVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREIT 266

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
           +    + ++D   A+A   + +  V P +S  +HV F  +      +HPLL         
Sbjct: 267 HNAYVIGKLDFINAKARLGKELKAVVPEVSQANHVVFKQA------RHPLL--------- 311

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                 NP K+                    V  DI +  E + +VITGPNTGGKT ++K
Sbjct: 312 ------NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLK 345

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           TLGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 346 TLGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKV 405

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
             +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA
Sbjct: 406 DHQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINA 465

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E
Sbjct: 466 SMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNE 520

Query: 550 LYQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
           + + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE 
Sbjct: 521 MIEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKEL 568

Query: 602 QQVQQELN 609
           Q+ ++E N
Sbjct: 569 QKARKEAN 576


>gi|423640379|ref|ZP_17615997.1| MutS2 protein [Bacillus cereus VD166]
 gi|401281295|gb|EJR87208.1| MutS2 protein [Bacillus cereus VD166]
          Length = 786

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 212/720 (29%), Positives = 351/720 (48%), Gaps = 89/720 (12%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMADNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
           L E ++  E     A +L  +   L+RE++ +  +   DR    LKA+  ++ ++++  A
Sbjct: 526 LEESQKNAERDWNEAETLRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAA 583

Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
           K + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633

Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           +  P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|255975938|ref|ZP_05426524.1| DNA mismatch repair protein mutS [Enterococcus faecalis T2]
 gi|307278476|ref|ZP_07559550.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0860]
 gi|255968810|gb|EET99432.1| DNA mismatch repair protein mutS [Enterococcus faecalis T2]
 gi|306504819|gb|EFM74015.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0860]
          Length = 788

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|256762410|ref|ZP_05502990.1| DNA mismatch repair protein mutS [Enterococcus faecalis T3]
 gi|307277459|ref|ZP_07558551.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX2134]
 gi|422694899|ref|ZP_16752887.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX4244]
 gi|256683661|gb|EEU23356.1| DNA mismatch repair protein mutS [Enterococcus faecalis T3]
 gi|306505724|gb|EFM74902.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX2134]
 gi|315147901|gb|EFT91917.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX4244]
          Length = 788

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|384266410|ref|YP_005422117.1| DNA mismatch repair protein mutS [Bacillus amyloliquefaciens subsp.
           plantarum YAU B9601-Y2]
 gi|387899448|ref|YP_006329744.1| DNA mismatch repair protein [Bacillus amyloliquefaciens Y2]
 gi|380499763|emb|CCG50801.1| DNA mismatch repair protein mutS [Bacillus amyloliquefaciens subsp.
           plantarum YAU B9601-Y2]
 gi|387173558|gb|AFJ63019.1| DNA mismatch repair protein [Bacillus amyloliquefaciens Y2]
          Length = 785

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 212/722 (29%), Positives = 355/722 (49%), Gaps = 79/722 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L + QK L++   A A+M+ +       + DI   L  A  G +L+P+E   +   L AV
Sbjct: 40  LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             +   +++  E DG  +    PL++   +    L +LE +I  CID    + LD AS  
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153

Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++   
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT   A+  +EI  
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            ++ +  +D  FA+A +A+ M    P+++       D  I ++  +HPLL          
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P    V N                   DI++  +   +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL ++M++AGL++PA        FD + ADIGD QS+EQ+LSTFS H+  IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETL PTY++L G  G SNA  I++ +G    II +A+  +        +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521

Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
              SL   +++ + +     S+  E   L++E++ +  +L+ +   +  +  Q+  ++L 
Sbjct: 522 MIASLENSKKRADEELSETESIRKEAEKLHKELQQQIIELNAQKDKMMEEAEQKAAEKLE 581

Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            A  + + ++++    + + R     E+    K    A+ A  ++ +P+           
Sbjct: 582 AAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTE----KKR 637

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN---IRPIPNSKRK 723
              P  G++V V + G K A ++E  G+ +   VQ G ++++VK+ +   ++  P  K++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSAPEPKKE 693

Query: 724 NA 725
            A
Sbjct: 694 KA 695


>gi|333370261|ref|ZP_08462275.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
 gi|332978201|gb|EGK14933.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
          Length = 784

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 212/702 (30%), Positives = 349/702 (49%), Gaps = 67/702 (9%)

Query: 18  EESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           +E Q++L  T+ A+ +++ +  L L  + DI   L  A  G LL+  E+  V  T  A  
Sbjct: 41  DEVQRMLQSTAEAIDLLRLKGNLSLEAVSDIHPALQRARIGGLLTSVELLRVAGTAGAEE 100

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
            V   L E  + D   L     L   LK    L      I   ID    +  D AS +L 
Sbjct: 101 TVCSVL-EGMDPDETPLPLLRELSGQLKETRILAR---TIRGAIDEDGAVT-DDASPELG 155

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDK----PLITKRRSRMCVGIKASHKYLLPD 192
            IR    RN+  L   ++    +  +     K    P+IT+R  R  + +K  ++  +  
Sbjct: 156 RIR----RNIRQLQGAIRTTLDEFLRHSQYQKMLQDPIITQRNDRYVIPVKQEYRGAV-R 210

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           GI  + S+SG T F+EP+  V  NN    L   E  E   IL  LTAE+A    +++  +
Sbjct: 211 GIVHDQSASGQTLFIEPQAVVNQNNRLRELELEEEREVERILGELTAEVADKADDLESNL 270

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
             + ++DL  A+A   + M G+ P       V+ D  I ++  +HPL+            
Sbjct: 271 SVLTQLDLILAKARLGKRMKGIVP------GVNMDGFIRLKRARHPLI------------ 312

Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
               P+K                     VP D+++  E R +VITGPNTGGKT ++KT+G
Sbjct: 313 ----PMKE-------------------AVPNDVELGREQRAIVITGPNTGGKTVTLKTVG 349

Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
           L +LM+++GL +PA+    L  F  + ADIGD QS+EQNLSTFS H++ IV IL+ +   
Sbjct: 350 LLALMAQSGLPIPAEEESDLAIFTGVYADIGDEQSIEQNLSTFSSHMTNIVHILDSMDEN 409

Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
           SLVL+DE+G+GTDP+EG ALA S+L+ + ++    V TTHY +L           NA+ E
Sbjct: 410 SLVLLDELGAGTDPTEGAALAISVLERVLEQGCRVVATTHYNELKLYAHAREGVINASVE 469

Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
           F +E+L PTYR+L G  G SNA  I++ +G   ++IQ A+  +       +++R  E+  
Sbjct: 470 FDVESLSPTYRLLTGVPGRSNAFEISRRLGLPEEVIQAAKSQL-----SSEENRLEEMIG 524

Query: 553 SLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAK 612
           +L E+RR+ E + R A +L  +   L ++++ + +  DR    ++    ++ +  ++ AK
Sbjct: 525 ALSEDRRRAEKERREAEALRQQAEALLQDLKLKMESWDREKERIRESARREAKTIVSRAK 584

Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
            + D V++      R+   +     + E++  +    E   P+   + S    S+   + 
Sbjct: 585 READAVLEQLRRWARERPGELKEHRLIEAKKRL----EDAEPETPTAQSVDRESTRQIRV 640

Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
           G++V V++LG K   V++  G+ +   VQ G M+++V +  +
Sbjct: 641 GDEVLVRTLGQK-GQVIDQLGERE-FQVQVGIMKMKVGREQL 680


>gi|332982288|ref|YP_004463729.1| MutS2 family protein [Mahella australiensis 50-1 BON]
 gi|332699966|gb|AEE96907.1| MutS2 family protein [Mahella australiensis 50-1 BON]
          Length = 784

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 205/700 (29%), Positives = 344/700 (49%), Gaps = 84/700 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSE---ICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
           L  I D+   +N+A  G  L P E   I +V +T R +   + +  E A+L  D      
Sbjct: 65  LEGIRDVKDSVNAAAVGATLRPKELLDIASVIKTARLMKG-YAQENENADLIAD------ 117

Query: 98  PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
               L  + + +  +E++I  CI  +  I  D   E  ++ R   + N    D L   + 
Sbjct: 118 ----LCYSLHSMKAVEDEIYRCILSEDEIADDATPELKDIRRHIAQANQRIRDKLNDIIH 173

Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
           +  +Q   +  P++T R  R  V IK   +    +G+  + S SGAT F+EP   VE NN
Sbjct: 174 STQYQRM-LQDPIVTIRNGRYVVPIKQECRSSF-EGLIQDQSGSGATLFIEPMAVVEANN 231

Query: 218 MEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
            ++R    +  EE   IL+  +  I +   +I   +  + ++DL FA+   +  M+ V P
Sbjct: 232 -DLRAYMLQEQEEIERILASFSHMIGQHSEDILNDLGILAQLDLIFAKGQLSIEMNAVRP 290

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
           +L+    + F  +      +HPL+               +P                   
Sbjct: 291 LLTENDGIIFKRA------RHPLI---------------DP------------------- 310

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
            D  VPID+++  +   ++ITGPNTGGKT ++KT+GL +LM++AGL++PA    ++  F 
Sbjct: 311 -DKVVPIDLELGRQFTQLIITGPNTGGKTVTLKTIGLLTLMAQAGLHVPAGIGTQIRIFT 369

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            + ADIGD QS+EQ+LSTFS H++ IV IL      SLVL+DE+G+GTDP+EG ALA +I
Sbjct: 370 GVYADIGDEQSIEQSLSTFSSHMTNIVHILNSADHRSLVLLDELGAGTDPTEGAALAMAI 429

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L  LR +  +   TTHY+ L     K     NA  EF +ETLRPTYR++ G  G SNA  
Sbjct: 430 LDELRHKGAIVAATTHYSQLKAYALKTPGVINAGMEFDVETLRPTYRLIVGVPGKSNAFI 489

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I++ +G   +++ RAQ L+       +   + E     +EE+R +  + R  A   A+++
Sbjct: 490 ISRKLGLSDEVLARAQALL------NESDLRFEDVIGKLEEQRHMAEKERAEA---AQVL 540

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQE----LNFAKVQIDTVVQDFENQLRDA--- 629
           +  R +E + + L+ +    +     + +QE    L+ AK Q D +++    +LRDA   
Sbjct: 541 EQARLLEQKYQQLNTQLEQKRNDIIHKARQEAKVVLSRAKSQADQIIK----ELRDAQMQ 596

Query: 630 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
           ++ E N  I+++ + +   +E   P+ +        ++  P  G QV++  L  + +  +
Sbjct: 597 ASKEANKTIEQARTTLKKEIEELSPEQEAGEHYKPVTNVKP--GMQVYIVPL--RASGFI 652

Query: 690 EVPGD-DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
             P D +  V VQ G M+     +++  +P  + +  + P
Sbjct: 653 LTPPDANGNVQVQVGIMKAAASLSDLAELPEHEAQVKSQP 692


>gi|229093646|ref|ZP_04224746.1| hypothetical protein bcere0021_43700 [Bacillus cereus Rock3-42]
 gi|228689733|gb|EEL43540.1| hypothetical protein bcere0021_43700 [Bacillus cereus Rock3-42]
          Length = 786

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 208/718 (28%), Positives = 348/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I++A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|452856510|ref|YP_007498193.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
           subsp. plantarum UCMB5036]
 gi|452080770|emb|CCP22535.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
           subsp. plantarum UCMB5036]
          Length = 785

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 212/722 (29%), Positives = 356/722 (49%), Gaps = 79/722 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L + QK L++   A A+M+ +       + DI   L  A  G +L+P+E   +   L AV
Sbjct: 40  LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             +   +++  E DG  +    PL++   +    L +LE +I  CID    + LD AS  
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153

Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++   
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT   A+  +EI  
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            ++ +  +D  FA+A +A+ M    P+++       D  I ++  +HPLL          
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P    V N                   DI++  +   +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL ++M++AGL++PA        FD + ADIGD QS+EQ+LSTFS H+  IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETL PTY++L G  G SNA  I++ +G    II +A+  +        +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521

Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
              SL + +++ + +     S+  E   L++E++ +  +L+ +   +  +  Q+  ++L 
Sbjct: 522 MIASLEKSKKRADEELSETESIRKEAEKLHKELQQQIIELNAQKDKMMEEAEQKAAEKLE 581

Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            A  + + ++++    + + R     E+    K    A+ A  ++ +P+           
Sbjct: 582 AAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTE----KKR 637

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN---IRPIPNSKRK 723
              P  G++V V + G K A ++E  G+ +   VQ G ++++VK+ +   ++  P  K++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSAPEPKKE 693

Query: 724 NA 725
            A
Sbjct: 694 KA 695


>gi|228954821|ref|ZP_04116841.1| hypothetical protein bthur0006_41880 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229112016|ref|ZP_04241559.1| hypothetical protein bcere0018_42590 [Bacillus cereus Rock1-15]
 gi|423426676|ref|ZP_17403707.1| MutS2 protein [Bacillus cereus BAG3X2-2]
 gi|423437985|ref|ZP_17414966.1| MutS2 protein [Bacillus cereus BAG4X12-1]
 gi|423502774|ref|ZP_17479366.1| MutS2 protein [Bacillus cereus HD73]
 gi|449091504|ref|YP_007423945.1| hypothetical protein HD73_4846 [Bacillus thuringiensis serovar
           kurstaki str. HD73]
 gi|228671339|gb|EEL26640.1| hypothetical protein bcere0018_42590 [Bacillus cereus Rock1-15]
 gi|228804810|gb|EEM51409.1| hypothetical protein bthur0006_41880 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|401110242|gb|EJQ18151.1| MutS2 protein [Bacillus cereus BAG3X2-2]
 gi|401119598|gb|EJQ27409.1| MutS2 protein [Bacillus cereus BAG4X12-1]
 gi|402460013|gb|EJV91741.1| MutS2 protein [Bacillus cereus HD73]
 gi|449025261|gb|AGE80424.1| hypothetical protein HD73_4846 [Bacillus thuringiensis serovar
           kurstaki str. HD73]
          Length = 786

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 212/720 (29%), Positives = 351/720 (48%), Gaps = 89/720 (12%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMADNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
           L E ++  E     A +L  +   L+RE++ +  +   DR    LKA+  ++ ++++  A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAA 583

Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
           K + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633

Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           +  P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|327475227|gb|AEA77208.1| MutS2 [Bacillus sp. 15.4]
          Length = 784

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 220/718 (30%), Positives = 346/718 (48%), Gaps = 78/718 (10%)

Query: 16  SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           SLEE  ++  +T  A  +++ +    L  I DI   +  A  G +LSP E   V  T+ A
Sbjct: 39  SLEEVIRIQEETDEAAGILRLKGHAPLGGIFDIRPAVKRATIGGMLSPQEFVQVASTIYA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
              +   + +  E D D L     L E +     LT LE KI   +D     ILD AS+ 
Sbjct: 99  SRQIRLFMEDLEEEDIDLL----ILSEKVSEMMVLTPLEHKIRAVVDENG-AILDSASDP 153

Query: 135 LELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK--Y 188
           L  IR++ + N     E L+ +++   AQ      +   +IT R  R  + +K  ++  Y
Sbjct: 154 LRQIRSQIRANEGRIREKLERMIRSSNAQKM----LSDAIITIRNDRYVIPVKQEYRGNY 209

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
               GI  + SSSG T F+EP+  V  NN    L   E  E   IL+ LT E++    ++
Sbjct: 210 ---GGIIHDQSSSGQTLFIEPEVIVTLNNALRELKLKEGLEIERILTELTVEVSGYSEDL 266

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
             ++  + +ID  F +A + + + G  P ++ +  +  + +      +HP+L        
Sbjct: 267 LTIVAILADIDFMFTKAKYGKSIKGTKPEINGEQVLKLNRA------RHPML-------- 312

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                   P++  V N                   DI++  +   +VITGPNTGGKT ++
Sbjct: 313 --------PIEEAVAN-------------------DIELGKDFSSIVITGPNTGGKTVTL 345

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL +LM +AGL +PA +  ++  F  + ADIGD QS+EQ+LSTFS H+  IVDIL  
Sbjct: 346 KTVGLLTLMGQAGLQIPALDGSKMGVFQNVYADIGDEQSIEQSLSTFSSHMVNIVDILGK 405

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
           V  ESLVL DE+G+GTDP EG ALA SIL  +  R    V TTHY +L           N
Sbjct: 406 VDHESLVLFDELGAGTDPQEGAALAISILDEVHQRGAKVVATTHYPELKAYGYNRDGVIN 465

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETL PTY++L G  G SNA  I+K +G   ++I RA+  +     E +     
Sbjct: 466 ASVEFDVETLSPTYKLLIGVPGRSNAFEISKRLGLADRVINRAKSHIGTDSKEIEN---- 521

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
            +  SL + R+  ES    A  L  +   ++++++ +  +   +   L  K   +  Q +
Sbjct: 522 -MIASLEKSRKDAESDYDEAHELLKQADMMHKDMQKQMMEFYDKRDSLYEKAELKASQVV 580

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI-VEAHRPDDDFS---VSETN 664
             AK + + V++D      + SAD     +KE E   A   +E   P+ D S    + T 
Sbjct: 581 EKAKEEAEEVIRDLRKMRLEKSAD-----VKEHELIDAKKRIEGAAPNLDRSKPKKASTG 635

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
                P  G++V V +   K   + +V   +    VQ G M+++VK+++++ I   K+
Sbjct: 636 QRELKP--GDEVKVLTFDQKGHLIEKVSSKE--WQVQMGIMKMKVKESDLQFIQAEKK 689


>gi|256962011|ref|ZP_05566182.1| MutS 2 protein [Enterococcus faecalis Merz96]
 gi|257089797|ref|ZP_05584158.1| MutS 2 protein [Enterococcus faecalis CH188]
 gi|293382380|ref|ZP_06628319.1| DNA mismatch repair protein MutS [Enterococcus faecalis R712]
 gi|293389358|ref|ZP_06633816.1| DNA mismatch repair protein MutS [Enterococcus faecalis S613]
 gi|312904147|ref|ZP_07763315.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0635]
 gi|312907378|ref|ZP_07766369.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis DAPTO 512]
 gi|312909995|ref|ZP_07768842.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis DAPTO 516]
 gi|422689484|ref|ZP_16747596.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0630]
 gi|256952507|gb|EEU69139.1| MutS 2 protein [Enterococcus faecalis Merz96]
 gi|256998609|gb|EEU85129.1| MutS 2 protein [Enterococcus faecalis CH188]
 gi|291080325|gb|EFE17689.1| DNA mismatch repair protein MutS [Enterococcus faecalis R712]
 gi|291081245|gb|EFE18208.1| DNA mismatch repair protein MutS [Enterococcus faecalis S613]
 gi|310626406|gb|EFQ09689.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis DAPTO 512]
 gi|310632623|gb|EFQ15906.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0635]
 gi|311289268|gb|EFQ67824.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis DAPTO 516]
 gi|315577532|gb|EFU89723.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0630]
          Length = 788

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|403668407|ref|ZP_10933682.1| MutS2 protein [Kurthia sp. JC8E]
          Length = 789

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 212/720 (29%), Positives = 348/720 (48%), Gaps = 74/720 (10%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           +LEE Q LL +    L++++ +  + +  I DI      A  G +LSP E+  +  T+RA
Sbjct: 40  TLEEVQSLLEEMDEGLSILRIKGSVPMGGIFDIRPHARRAQIGGILSPKELMEISSTIRA 99

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKN-CNFLTELEEKIGFCIDCKLLIILDRASE 133
            + ++++  E  E D +      PL    K     LT L+ +I  CID    + +D AS+
Sbjct: 100 -SRIFREFIEVIEADNEI---EIPLFIAKKEELPILTGLQHEINSCIDDNAKV-MDSASQ 154

Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L  IR + +    R  + L SL +  AA    A  +   +IT R  R  + +KA ++  
Sbjct: 155 ALRGIRTQLRTQEGRVRDRLASLTRGSAA----AKMLSDSIITLRNDRFVIPVKAEYRSH 210

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
              G+  + S+SG T ++EP   V+ NN    L   E AE   IL  L++++ +    + 
Sbjct: 211 Y-GGVIHDQSASGQTLYIEPDAVVQANNEIQNLKVKEKAEIDRILLELSSKVQEVAHSLF 269

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
            L+  +  ID+  A+A + Q      PI++ + ++    +      +HPLL         
Sbjct: 270 VLVQILAAIDVVLAKAKYGQANKCTMPIMNDRGYMKLTKA------RHPLL--------- 314

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                      D E +               V  DI+   +   +V+TGPNTGGKT S+K
Sbjct: 315 -----------DAETA---------------VANDIEFGDDITTIVVTGPNTGGKTVSLK 348

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+GL +LM++AGL +PA +   L  F  + ADIGD QS+EQ+LSTFS H+  IV+IL+  
Sbjct: 349 TIGLCTLMAQAGLPIPALDGSELSVFTQLFADIGDEQSIEQSLSTFSSHMVNIVEILKQF 408

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
              SLVL DE+G+GTDP EG ALA SIL  +  R    + TTHY +L           NA
Sbjct: 409 DDRSLVLFDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVINA 468

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF+++TL PTYR+L G  G SNA  I+K +G    II+ ++          + H    
Sbjct: 469 SMEFNVDTLSPTYRLLIGVPGRSNAFEISKRLGLPEHIIEASKAFT-----GTETHEVES 523

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
           +  SL   R + E  A   A L  E  +L  +++ +  + + +   L+ K  ++ ++ + 
Sbjct: 524 MIASLETSRLEAEKDAEETARLLEEANELRADLDAQMAEYEAKKETLENKAKEKARKIVE 583

Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSV----SETN 664
            AK + + V+ +       A     N  +KE E   A   +E   P  +  +     + N
Sbjct: 584 EAKREAEEVIDELHKMQHRA-----NKAVKEHEIIDARKRLEGAAPAQENRILKKQRQQN 638

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
             +   + G++V V S G +  T+++     D V VQ G +++++ +++++ I   K K+
Sbjct: 639 ARAKQLRVGDEVKVLSYGQR-GTLIDRDKTGDWV-VQIGILKMKLPEDDLQYIKPEKTKD 696


>gi|257082629|ref|ZP_05576990.1| MutS 2 protein [Enterococcus faecalis E1Sol]
 gi|256990659|gb|EEU77961.1| MutS 2 protein [Enterococcus faecalis E1Sol]
          Length = 788

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNVF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|307288101|ref|ZP_07568111.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0109]
 gi|422704386|ref|ZP_16762196.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX1302]
 gi|306500837|gb|EFM70155.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0109]
 gi|315164284|gb|EFU08301.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX1302]
          Length = 788

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|261418293|ref|YP_003251975.1| recombination and DNA strand exchange inhibitor protein
           [Geobacillus sp. Y412MC61]
 gi|319767747|ref|YP_004133248.1| MutS2 family protein [Geobacillus sp. Y412MC52]
 gi|261374750|gb|ACX77493.1| MutS2 family protein [Geobacillus sp. Y412MC61]
 gi|317112613|gb|ADU95105.1| MutS2 family protein [Geobacillus sp. Y412MC52]
          Length = 792

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 187/528 (35%), Positives = 274/528 (51%), Gaps = 64/528 (12%)

Query: 17  LEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
           LEE    L +T  A A+++     PLD +   DI   L  A  G  LSP E+  V  T  
Sbjct: 48  LEEVAAWLEETDEAAAVLRLAGYAPLDGAV--DIRPHLKRAAIGGTLSPQELLEVAATSA 105

Query: 74  AVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           A   + + + +  E  G  D L  Y+   EL++    +  LE  I   ID    + LD A
Sbjct: 106 ASRQMKRLIMDLHEEHGGLDRLSTYAD--ELVE----VPALEHDIRRSIDDHGEV-LDAA 158

Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
           S+ L  +R + +    R  E L+S+++  +AQ      +   +IT R  R  + +K  ++
Sbjct: 159 SDRLRSLRGQIRSLEARIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYR 214

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
                GI  + S+SGAT F+EP+  VE NN        E  E   IL  L+A++A+    
Sbjct: 215 GAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEP 273

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           +   ++ +  +D AFA+A +A+ +    P ++S+ ++ F  +      +HPLL       
Sbjct: 274 LARAVEALAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL------- 320

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                        D E +               VP DI++  +   +VITGPNTGGKT +
Sbjct: 321 -------------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVT 352

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL +LM++AGL++PA +      F  + ADIGD QS+EQ+LSTFS H+  IVDIL 
Sbjct: 353 LKTIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILR 412

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
           LV  ESLVL DE+G+GTDP EG ALA +IL  +  R    V TTHY +L           
Sbjct: 413 LVDGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVV 472

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           NA+ EF  ETLRPTY++L G  G SNA +I++ +G D +II+RA+  V
Sbjct: 473 NASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV 520


>gi|418576544|ref|ZP_13140678.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus saprophyticus subsp. saprophyticus KACC
           16562]
 gi|379324965|gb|EHY92109.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus saprophyticus subsp. saprophyticus KACC
           16562]
          Length = 782

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 209/709 (29%), Positives = 349/709 (49%), Gaps = 99/709 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  I+  ++ A  G +LS SE+  ++R ++ + N +K       L+ +    Y  L 
Sbjct: 65  LSGLAKISTYIHRAKIGGVLSVSELNVIKRLIQ-IQNQYKTFYNNL-LNEEETINYPILN 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + ++    L++L + I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DRMEQLPVLSDLYQSI--HQKCDTYDLYDNASYELQGIRSKISSTNQRIKQNLDKIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE +
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMS 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   ILS LT E+A+ E +   + + ++ +ID   A+A +A  + G  
Sbjct: 236 NQISRLKNDEAIERERILSALTVEVAE-EADACLISESIMGQIDFLTAKARYASSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P  +       D ++ +    HPLL   ++       +N+     D+E            
Sbjct: 295 PQFTK------DRTVYLPKAFHPLLDKQTV------VANTIEFAQDIE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++G+ +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGILIPTLDGSQLSIF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL   ++ SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILHDTTKNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++ +   L + TTHY +L           NA+ EF + TL PTY++L G  G SNA 
Sbjct: 434 ILDHVHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM-------EERRKLESQARTA 568
           +I+K +G + K+IQ+A+ ++      + +   +E+  SL        E+R +L+   R A
Sbjct: 494 DISKKLGLNMKVIQKAKSMI-----GQDEQEINEMIASLESNSKRVDEQRIELDYLLREA 548

Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
              H  +   Y + ++  K L   A   K K  Q+V+     A  + D ++++   +LRD
Sbjct: 549 QDTHDALAKQYEQYQNHEKQLMNEA---KEKANQRVKS----ATKEADDILKELR-ELRD 600

Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
               +    +KE E     I +  + DD +       +    ++     G++V V + G 
Sbjct: 601 QKGAD----VKEHE----LIDKKKQLDDQYEAKSLKQNVQKKKWDEINAGDEVKVLTYGQ 652

Query: 684 KLATVVEVPGDDDTVLVQYG--KMRV------RVKKNNIRPIPNSKRKN 724
           K   V+E+  D +  +VQ G  KM++      + KK    P    KR+N
Sbjct: 653 K-GEVLELI-DHNEAVVQMGIIKMKLPLEDLEKTKKTKSEPTKMIKREN 699


>gi|257416014|ref|ZP_05593008.1| MutS 2 protein [Enterococcus faecalis ARO1/DG]
 gi|300860265|ref|ZP_07106352.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TUSoD Ef11]
 gi|384513156|ref|YP_005708249.1| DNA mismatch repair protein MutS [Enterococcus faecalis OG1RF]
 gi|422733668|ref|ZP_16789970.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0645]
 gi|422738643|ref|ZP_16793838.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX2141]
 gi|428766910|ref|YP_007153021.1| DNA mismatch repair protein, mutS2 family [Enterococcus faecalis
           str. Symbioflor 1]
 gi|430360426|ref|ZP_19426273.1| MutS 2 protein [Enterococcus faecalis OG1X]
 gi|430368259|ref|ZP_19428131.1| MutS 2 protein [Enterococcus faecalis M7]
 gi|257157842|gb|EEU87802.1| MutS 2 protein [Enterococcus faecalis ARO1/DG]
 gi|295112922|emb|CBL31559.1| MutS2 family protein [Enterococcus sp. 7L76]
 gi|300849304|gb|EFK77054.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TUSoD Ef11]
 gi|315145717|gb|EFT89733.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX2141]
 gi|315160196|gb|EFU04213.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0645]
 gi|327535045|gb|AEA93879.1| DNA mismatch repair protein MutS [Enterococcus faecalis OG1RF]
 gi|427185083|emb|CCO72307.1| DNA mismatch repair protein, mutS2 family [Enterococcus faecalis
           str. Symbioflor 1]
 gi|429512902|gb|ELA02497.1| MutS 2 protein [Enterococcus faecalis OG1X]
 gi|429516421|gb|ELA05913.1| MutS 2 protein [Enterococcus faecalis M7]
          Length = 788

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|196034369|ref|ZP_03101778.1| MutS2 family protein [Bacillus cereus W]
 gi|218905777|ref|YP_002453611.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           cereus AH820]
 gi|228929599|ref|ZP_04092617.1| hypothetical protein bthur0010_42830 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|226723044|sp|B7JR57.1|MUTS2_BACC0 RecName: Full=MutS2 protein
 gi|195992911|gb|EDX56870.1| MutS2 family protein [Bacillus cereus W]
 gi|218535887|gb|ACK88285.1| MutS2 family protein [Bacillus cereus AH820]
 gi|228829986|gb|EEM75605.1| hypothetical protein bthur0010_42830 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 786

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 210/715 (29%), Positives = 349/715 (48%), Gaps = 79/715 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +      V+  NTS  
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK------VNVKNTSPK 638

Query: 669 TP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
              + G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 639 QQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|312900671|ref|ZP_07759968.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0470]
 gi|311292152|gb|EFQ70708.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0470]
          Length = 788

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|319651779|ref|ZP_08005905.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. 2_A_57_CT2]
 gi|317396598|gb|EFV77310.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. 2_A_57_CT2]
          Length = 785

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 206/695 (29%), Positives = 336/695 (48%), Gaps = 84/695 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  AV G +LSP E+  +  T+ A   + + + E AE +         LL
Sbjct: 65  LGGIFDIRPHVKRAVIGGMLSPQELNQISSTIHASRQMKRFIEEFAEEESS----LPILL 120

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE----LIRAERKRNMENLDSLLKKV 156
                   L +LE  I   +D    + LD ASE L      +R +  R  E L+S+++  
Sbjct: 121 GYTDKIIVLADLETSIRNAVDDNGEV-LDSASETLRSLRNQLRTKESRVRERLESMIRST 179

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           +AQ      +   +IT R  R  + +K  ++     GI  + SSSG T F+EP   V+ N
Sbjct: 180 SAQKM----LSDAIITIRNDRFVIPVKQEYRGHY-GGIIHDQSSSGQTLFIEPASIVQLN 234

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N    +   E  E   IL  L+ + A++  E++ +++ + EID  FA+A +++ +    P
Sbjct: 235 NELQGIRVKEQQEIERILIALSVQAAENSSELETIVEVLGEIDFMFAKARYSKRIKASKP 294

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
            ++++  +S   +      +HPL+                P+   V N            
Sbjct: 295 KINNEGIISLFKA------RHPLI----------------PIDEVVAN------------ 320

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
                  DIK+  E   +VITGPNTGGKT ++KT+GL +LM++AGL +PA +      F 
Sbjct: 321 -------DIKLGAEYSTIVITGPNTGGKTVTLKTVGLCTLMAQAGLQIPALDGSETAVFG 373

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            + ADIGD QS+EQ+LSTFS H+  IVDIL+ V   SLVL DE+G+GTDP EG ALA SI
Sbjct: 374 NVYADIGDEQSIEQSLSTFSSHMVNIVDILDQVDFNSLVLFDELGAGTDPQEGAALAISI 433

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L  +  R    + TTHY +L           NA+ EF +ETL PTY++L G  G SNA  
Sbjct: 434 LDEVYKRGARVIATTHYPELKAYGYNREGVINASVEFDIETLSPTYKLLIGVPGRSNAFE 493

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I+K +G   ++I+ A+  +         ++   +  SL E RR+ E+    A        
Sbjct: 494 ISKRLGLKDQVIETARSYI-----GADTNQVENMIASLEESRRQAEADMEEANDFLKSAE 548

Query: 577 DLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
            L+++++ +  +   ++ A H KA E  + +  +  AK + + +++D      +  A+  
Sbjct: 549 KLHKDLQKQMAEFYEEKDAMHEKAAE--RAEDIVEKAKAEAEEIIRDLRKMRMEKHAE-- 604

Query: 635 NSLIKESESAIAAIVEAHR------PDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLA 686
              +KE E     ++EA +      P    + ++    +    F  G++V V S G K  
Sbjct: 605 ---VKEHE-----LIEAKKRLSEAAPQMSSAKNKLKPKNNKHVFEAGDEVKVLSFGQKGH 656

Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
            + +V   D+   VQ G ++++V + ++  + + K
Sbjct: 657 LLEKV--SDNEWQVQIGILKMKVAERDLEYVKSPK 689


>gi|257086832|ref|ZP_05581193.1| MutS 2 protein [Enterococcus faecalis D6]
 gi|422722610|ref|ZP_16779160.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX2137]
 gi|424673309|ref|ZP_18110252.1| MutS2 family protein [Enterococcus faecalis 599]
 gi|256994862|gb|EEU82164.1| MutS 2 protein [Enterococcus faecalis D6]
 gi|315027355|gb|EFT39287.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX2137]
 gi|402353119|gb|EJU87955.1| MutS2 family protein [Enterococcus faecalis 599]
          Length = 788

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNVF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|374711381|ref|ZP_09715815.1| recombination and DNA strand exchange inhibitor protein
           [Sporolactobacillus inulinus CASD]
          Length = 783

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 213/727 (29%), Positives = 350/727 (48%), Gaps = 77/727 (10%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           Q+  ++ +  L +  S P     I D+   L  +  G LL   E+  +  T+R    + K
Sbjct: 47  QEATDEGTTVLRLKGSVPF--GGITDVRPALKRSKIGGLLQARELIDLADTIRGARLMKK 104

Query: 81  ---KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
               L E  EL+   LQ      E  +  +   ELE KI   ID +  + +D AS  L  
Sbjct: 105 FILNLIEDQELELPILQ------ECTETIDPPGELERKIRRAIDDQGGV-MDSASPALRH 157

Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
           IR +    +   DS +K+    I ++ G  + + LIT R  R  + +K  ++     GI 
Sbjct: 158 IRGQ----IRTCDSRVKQKLENIVRSSGKMLSETLITIRNDRQVIPVKQQYRASF-GGIV 212

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
            + S+SGAT F+EP+  V+ NN        E  E   IL +L+ E ++    +   ++ +
Sbjct: 213 HDQSASGATLFIEPQAIVDLNNQLSEARAKERHEIERILRVLSEETSEYAEVMLENIEAL 272

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            ++D  FA+AG+A  +    P L+ Q        I ++  +HPL+    +          
Sbjct: 273 AQLDFIFAKAGYAHEIKATRPKLNDQG------IIRLKKARHPLIDRQRV---------- 316

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VPID+  +  T  ++ITGPNTGGKT S+KT GL +
Sbjct: 317 -------------------------VPIDVLFDEHTHALIITGPNTGGKTVSLKTTGLLT 351

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM+++GL +P         F  + ADIGD QS+EQ+LSTFS H++ IV IL+ V   SLV
Sbjct: 352 LMAQSGLQIPVDEGSEASVFREVFADIGDEQSIEQSLSTFSSHMTNIVTILKRVDFNSLV 411

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DE+G+GTDP EG AL+ SIL  +  +    V TTHY++L     +     NA+ EF +
Sbjct: 412 LFDELGAGTDPQEGAALSMSILDAVYGKGATIVCTTHYSELKAYAYERQGVMNASVEFDV 471

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
           ETL PTYR+L G  G SNA  I++ +G   +II  A     +L+   + ++  ++  SL 
Sbjct: 472 ETLSPTYRLLLGVPGRSNAFEISRKLGLPAEIIAGA-----KLQISTETNQVDKMIASLE 526

Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
           + R+  E +   A  L  E+     ++  +  +L+R    +  K  ++ ++ L+ A+ + 
Sbjct: 527 QNRKTAEREEERARKLKLEVEAREADLTKKLNELERSKEEILNKAREKAERALSGARREA 586

Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS---SFTPQF 672
           + ++++  N     +  E + LI ++++ +A  +++ +P D   V +       SF P  
Sbjct: 587 EEIIEELRNYQHSGNVKE-HQLI-DAKTKLAHALDSLQPKDSDQVKKPEQKLDRSFHP-- 642

Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 732
           G+ V + S G +   V ++   D   LVQ G +++ VK N+++ I   K K  A P   +
Sbjct: 643 GDTVKIISFGQEGYIVSKI--SDQDYLVQAGILKMNVKANDLKRI---KEKKQAKPVVNV 697

Query: 733 RKQVCTC 739
           R    T 
Sbjct: 698 RTATQTV 704


>gi|256618984|ref|ZP_05475830.1| MutS 2 protein [Enterococcus faecalis ATCC 4200]
 gi|256598511|gb|EEU17687.1| MutS 2 protein [Enterococcus faecalis ATCC 4200]
          Length = 788

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDTLVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|451345992|ref|YP_007444623.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           amyloliquefaciens IT-45]
 gi|449849750|gb|AGF26742.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           amyloliquefaciens IT-45]
          Length = 785

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 187/581 (32%), Positives = 292/581 (50%), Gaps = 65/581 (11%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L + QK L++   A A+M+ +       + DI   L  A  G +L+P+E   +   L AV
Sbjct: 40  LADIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             +   +++  E DG  +    PL++   +    L +LE +I  CID    + LD AS  
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153

Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++   
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT   A+  +EI  
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            ++ +  +D  FA+A +A+ M    P ++       D  I ++  +HPLL          
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL---------- 312

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P    V N                   DI++  +   +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL ++M++AGL++PA        FD + ADIGD QS+EQ+LSTFS H+  IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETL PTY++L G  G SNA  I++ +G    II +A+  +        +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521

Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
              SL + +++ + +     SL  E   L++E++ +  +L+
Sbjct: 522 MIASLEKSKKRADEELSETESLRKEAEKLHKELQQQIIELN 562


>gi|425738677|ref|ZP_18856935.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus massiliensis S46]
 gi|425479024|gb|EKU46205.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus massiliensis S46]
          Length = 782

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 200/682 (29%), Positives = 330/682 (48%), Gaps = 73/682 (10%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  I+  +  A  G +L+  E+ A++R ++  N       +  E D   +  Y  L 
Sbjct: 65  LSGLSKISDYVKRATIGSVLNVKELNAIKRVIQVQNQFKTFYNQMVEEDEKIV--YPILN 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           E ++    LT+L + I     C    + D AS  L  IR++      R  + LD ++K  
Sbjct: 123 EQIEQLPVLTDLYQTIHQT--CDESDLFDDASPTLHSIRSKISTTNHRIRQQLDKIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           + Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 SNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N   RL + E  E   IL+ LT  +A            +  ID   A+A +A+ + G  P
Sbjct: 236 NQISRLRSEEDTERARILTELTTLVATDSEGCLSAESIMGHIDFLTAKARYARSIKGTKP 295

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
             ++   +    +       HPLL   ++       SN+   + D+E             
Sbjct: 296 TFTTNRDIYLPKAF------HPLLDAETV------VSNTIEFEPDIE------------- 330

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
                            V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  FD
Sbjct: 331 ----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSKLGVFD 374

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            +  DIGD QS+EQ+LSTFS H+  IV+IL+  ++ SL+L DE+G+GTDP+EG  LA SI
Sbjct: 375 HVFCDIGDEQSIEQSLSTFSSHMKTIVNILDEANQNSLILFDELGAGTDPTEGATLAMSI 434

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L Y+ +   L + TTHY +L           NA+ EF + TL PTY++L G  G SNA  
Sbjct: 435 LDYVHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFE 494

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHAE 574
           I+K +G   +II  A+ +V     E     +S     + + E++ +L++  R A ++H E
Sbjct: 495 ISKRLGLKLQIINHAKSMVGHDEKEINAMIESLERNTKRVDEQKIELDALIREAETMHKE 554

Query: 575 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
           +   Y   ++  K L  +A   K K  Q+V++    A  + DT++++   Q+RD    ++
Sbjct: 555 LDQTYTAYQNYEKRLMEQA---KEKANQRVKE----ATKEADTILKELR-QMRDKKGVDV 606

Query: 635 --NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 692
             + LI + +      +E     D    +         + G++V V S G K   V+E+ 
Sbjct: 607 KEHELIDKKKR-----LENQYEADSLKANVKKKKWDKIKAGDEVKVLSYGQK-GEVLELL 660

Query: 693 GDDDTVLVQYGKMRVRVKKNNI 714
            DDD  +VQ G +++++  N++
Sbjct: 661 -DDDEAVVQMGIIKMKLPLNDL 681


>gi|358068271|ref|ZP_09154738.1| hypothetical protein HMPREF9333_01619 [Johnsonella ignava ATCC
           51276]
 gi|356693530|gb|EHI55204.1| hypothetical protein HMPREF9333_01619 [Johnsonella ignava ATCC
           51276]
          Length = 846

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 186/621 (29%), Positives = 309/621 (49%), Gaps = 62/621 (9%)

Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--I 166
           LT+++ +I  CI  +  I  + +    EL++  +     N+ S +  V   + ++    +
Sbjct: 187 LTQIKNEIARCILSETEISDNASPRLFELVKQHK-----NVQSKMHTVLQSLLESHKEYL 241

Query: 167 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 226
              +IT +    C+ I+A  K  +  GI  + S+SG+T F+EP   + FNN E+R    E
Sbjct: 242 MDSIITMKDGAYCLPIRADFKNKV-SGIVHDHSASGSTIFIEPMAVIRFNN-ELREIEIE 299

Query: 227 IAEET-AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
             +E   IL  L++ I     +I   +  +  +D  +A+A  +  M    P+ + + +  
Sbjct: 300 KQQEIDNILEDLSSLIRPYIDDINENIKNMAHLDFVYAKAHLSDAMSASMPVFNDRFY-- 357

Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
               INI+  +HPL+                P                    +  VPI+I
Sbjct: 358 ----INIKEGRHPLI----------------P-------------------DNIVVPINI 378

Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
            +  +  ++VITGPNTGGKT S+KT+GL +LM ++GL++PA     LP F  + ADIGD 
Sbjct: 379 SIGDDYSLLVITGPNTGGKTVSLKTVGLFTLMGQSGLHIPAFEGSSLPVFKNVYADIGDE 438

Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
           QS+EQ+LSTFSGH+  IVDI++   R SL L DE+G+GTDP+EG ALA ++L +L  +  
Sbjct: 439 QSIEQSLSTFSGHMKNIVDIIKKADRSSLCLFDELGAGTDPAEGAALAIALLSHLHKKGA 498

Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
             + T+HY++L          ENA  EF++ETLRPTYRI+ G  G SNA  I++ +G   
Sbjct: 499 TVLATSHYSELKIFALNTPGIENACCEFNVETLRPTYRIIIGIPGKSNAFAISRKLGLPE 558

Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
            II  A+K +     E +     E+   +  +R  +E++ +   +  AEI  L +  E +
Sbjct: 559 YIIDEAKKNI-----EDENMSFEEILTKIEHDRFVIENEKKEINNYKAEIEKLKQTYEKK 613

Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 645
              +     ++  K   + +  L+ AK   DT + +  N+L   SA  I S +++    +
Sbjct: 614 NSRIQEIRENILEKARLEAENILSLAKETADTTINNI-NKL--TSAKGIGSELEKEREKL 670

Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
              ++         +S+ N++        G+ V+V S+  K  TV  +P D   + VQ G
Sbjct: 671 RESLKKLEKKPALKISKKNSAKKPKHLRCGDSVYVHSMNLK-GTVSSLPNDKGKLYVQMG 729

Query: 704 KMRVRVKKNNIRPIPNSKRKN 724
            +R +V  ++I  I ++   N
Sbjct: 730 ILRSQVSLDDIELIDDTPADN 750


>gi|422685288|ref|ZP_16743509.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX4000]
 gi|315029974|gb|EFT41906.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX4000]
          Length = 788

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QAWLNETQDGLKVHRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|229545911|ref|ZP_04434636.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
           TX1322]
 gi|256853039|ref|ZP_05558409.1| MutS2 protein [Enterococcus faecalis T8]
 gi|307291392|ref|ZP_07571276.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0411]
 gi|229308979|gb|EEN74966.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
           TX1322]
 gi|256711498|gb|EEU26536.1| MutS2 protein [Enterococcus faecalis T8]
 gi|306497623|gb|EFM67156.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX0411]
          Length = 788

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 304/607 (50%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QAWLNETQDGLKVHRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|424759532|ref|ZP_18187194.1| MutS2 family protein [Enterococcus faecalis R508]
 gi|402404409|gb|EJV37027.1| MutS2 family protein [Enterococcus faecalis R508]
          Length = 788

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 303/607 (49%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L       EL  ++   ID    +  D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKCLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+   Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKKAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|293336740|ref|NP_001168465.1| uncharacterized protein LOC100382240 [Zea mays]
 gi|223948449|gb|ACN28308.1| unknown [Zea mays]
          Length = 689

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 194/597 (32%), Positives = 304/597 (50%), Gaps = 71/597 (11%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIA--GILNSAVSGQLLSPSEICAVRRT 71
           S E+SQ LL +T AA+ ++ +    +D S ++ +A    ++S   G ++   E  AV   
Sbjct: 85  SYEQSQMLLQETEAAVLLLDNAGGAMDFSGLDTVAIESAIHSVSGGAVIKGLEAMAVTSL 144

Query: 72  LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           +  V ++   +  A +LD  S  R + L E + +      L + I   +D     + D A
Sbjct: 145 MMFVESLQVNIKAAMKLDEGSCSRLTTLTETILDAVINKSLVKSIQDIVDDDG-SVKDTA 203

Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
           S +L   R + +R    L  L+ K+         + +  I     R C+     +     
Sbjct: 204 SPELRRYREQVQRLENRLYQLMDKLMRNADDEASLSEVCIVN--GRCCIRTTMDNSSFF- 260

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKY 250
           DG+ L+ S +G+   +EP  AV  N+ E++ S + +A+ E  +LS LT +I      I+ 
Sbjct: 261 DGLLLSRSDAGS--MIEPIVAVPLND-ELQESRALVAKAELDVLSKLTDKIRLDLDSIQN 317

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILS----SQSHVSFDSSINIEGIK---------- 296
           L+   +++D   ARA ++   DG  P L         V+  +  +I+ I           
Sbjct: 318 LLQETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSATGGSIKQISSAQLPKKAWK 377

Query: 297 -------HPLLL-------GSSLRSLSAASSN-------------SNPLKSDVENSEMTV 329
                  HPLLL         + R +++A++               + L SD+++ ++ V
Sbjct: 378 LYMPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQDIAEEDQLASDLDSMKLRV 437

Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
             L K   D PVP+D  +  ET V+VITGPNTGGKT S+KT+GLASLM+K GLY+ A   
Sbjct: 438 SQLEK---DQPVPVDFMIAEETTVLVITGPNTGGKTISLKTVGLASLMAKIGLYILASEP 494

Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 449
            ++PWF+ + ADIGD QSL Q+LSTFSGH+ +I  I    + ESLVL+DE+G+GT+P EG
Sbjct: 495 VKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAESTSESLVLLDEVGAGTNPLEG 554

Query: 450 VALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
            AL  S+L+   +    L + TTH+ +L  LK  +  FENA  EF  E L+PT++ILWG 
Sbjct: 555 AALGMSLLESFAEAGSFLTLATTHHGELKTLKYSNNSFENACMEFDEENLKPTFKILWGI 614

Query: 509 TGDSNALNIAKSIGFDRKIIQRAQKL--------------VERLRPERQQHRKSELY 551
            G SNA+NI + +G    I++ +++L              +ERL+ E QQH +   Y
Sbjct: 615 PGRSNAINITERLGLPLDIVESSRRLLGTAGAEINALIMDMERLKQEYQQHLQEAQY 671


>gi|403744515|ref|ZP_10953741.1| MutS2 family protein [Alicyclobacillus hesperidum URH17-3-68]
 gi|403122049|gb|EJY56297.1| MutS2 family protein [Alicyclobacillus hesperidum URH17-3-68]
          Length = 780

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 213/713 (29%), Positives = 337/713 (47%), Gaps = 85/713 (11%)

Query: 12  PFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
           PF    E    L     A   ++++     + + DI   L+ A  G +L   ++ A+ + 
Sbjct: 39  PFSFRAEAESALAKVDEAYRCLLRAGSPPFAGVTDIRPALSRAKVGGVLGADQVLAIAQF 98

Query: 72  LRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCI--DCKLLIIL 128
           + A    +++  E A  + D      P+L ELL     L   E++I   +  D +   +L
Sbjct: 99  I-AGGRAFRQFIEHAATEIDL-----PVLSELLAPMADLRRTEQEIRQVVSDDGQ---VL 149

Query: 129 DRASEDL----ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
           D AS+ L       R         LD LL+    ++ Q     +P++  R    C+ ++ 
Sbjct: 150 DHASDVLLQLRSERRRREGEVRTTLDRLLR-THQKLLQ-----EPIVAMRGPYYCLPVRV 203

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTAEI 241
            HK  L  GI  +VSSSG+T F+EP+   E      R+   E+ EE  I   L  ++A I
Sbjct: 204 EHKNQL-RGIVRDVSSSGSTVFIEPRAVSEIGE---RIREIEVLEEREIERILQQISAVI 259

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
           A    E++  +  + + DL FA+AG+A+ + G  P L+       D    + G +HP L 
Sbjct: 260 ATVSEELETNVALLEQADLIFAKAGYARRIGGKRPQLT-------DGVWRLHGARHPQL- 311

Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
                         +P                       VPID+++  + R+++ITGPNT
Sbjct: 312 --------------HPAG---------------------VPIDVELGADFRLLIITGPNT 336

Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
           GGKT ++KT+GL +LM+ +GL+LP +    + +   +  DIGD QS+EQ+LSTFS H+  
Sbjct: 337 GGKTVTLKTVGLLTLMAMSGLFLPTRRESEIGFCRDVFVDIGDEQSIEQSLSTFSSHMKN 396

Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
           I+ +L+ V  +SLVL+DE+G+GTDP+EG ALA +IL  L       + TTHYA+L     
Sbjct: 397 IIQMLQQVDEKSLVLLDELGAGTDPAEGSALAIAILDRLTQVGARVMATTHYAELKGYAF 456

Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
            ++   NA+ EF L +LRPTYR+L G  G SNAL IA+ +G    I+  A++ V      
Sbjct: 457 HNSHAMNASMEFDLASLRPTYRLLMGVPGRSNALAIAQRLGLPDDILAAAREHV------ 510

Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
                 +E    + E   KLE+  R A  L  E    + +   + + LD R   L  +  
Sbjct: 511 ------AETDVHVEELIGKLEAANREAERLRDEAARAWEDARAQMEQLDARETALDKELA 564

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
              ++  N A   ++   Q+ E  +R+       ++       +   +E   P+   S  
Sbjct: 565 DVRERARNEAASIVEKAQQEAERIIRELRQMRHTTVKDHELVELRKGLEGLVPERKASPR 624

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
            +   S     G++V V SLG K   VVEV  D  + LVQ G MR++V  N++
Sbjct: 625 RSGKVSPKLSVGQRVRVISLGQK-GDVVEVAPDSKSALVQLGAMRMKVVVNDL 676


>gi|228941731|ref|ZP_04104278.1| hypothetical protein bthur0008_43670 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228974655|ref|ZP_04135221.1| hypothetical protein bthur0003_44080 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228981249|ref|ZP_04141549.1| hypothetical protein bthur0002_44100 [Bacillus thuringiensis Bt407]
 gi|384188627|ref|YP_005574523.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
           chinensis CT-43]
 gi|410676948|ref|YP_006929319.1| MutS2 protein MutS [Bacillus thuringiensis Bt407]
 gi|423386045|ref|ZP_17363301.1| MutS2 protein [Bacillus cereus BAG1X1-2]
 gi|423527598|ref|ZP_17504043.1| MutS2 protein [Bacillus cereus HuB1-1]
 gi|452201022|ref|YP_007481103.1| Recombination inhibitory protein MutS2 [Bacillus thuringiensis
           serovar thuringiensis str. IS5056]
 gi|228778449|gb|EEM26716.1| hypothetical protein bthur0002_44100 [Bacillus thuringiensis Bt407]
 gi|228785058|gb|EEM33071.1| hypothetical protein bthur0003_44080 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228817943|gb|EEM64021.1| hypothetical protein bthur0008_43670 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326942336|gb|AEA18232.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
           chinensis CT-43]
 gi|401634696|gb|EJS52459.1| MutS2 protein [Bacillus cereus BAG1X1-2]
 gi|402452967|gb|EJV84777.1| MutS2 protein [Bacillus cereus HuB1-1]
 gi|409176077|gb|AFV20382.1| MutS2 protein MutS [Bacillus thuringiensis Bt407]
 gi|452106415|gb|AGG03355.1| Recombination inhibitory protein MutS2 [Bacillus thuringiensis
           serovar thuringiensis str. IS5056]
          Length = 786

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 209/714 (29%), Positives = 351/714 (49%), Gaps = 77/714 (10%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            + + + A+ +G  L    P+LE  +     L ELE+KI  CI     ++ D AS+ L  
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYELEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ- 671
           + + ++Q+   QLR A    +N  +K+ E   A + +E   P+      + N  +  P+ 
Sbjct: 586 EAEGIIQEL-RQLRKAQL--VN--VKDHELIEAKSRLEGTAPEL-VKKQKVNVKNTAPKQ 639

Query: 672 ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
               G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 640 QLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|254724521|ref|ZP_05186304.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           anthracis str. A1055]
          Length = 786

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 208/718 (28%), Positives = 347/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSNRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|342216985|ref|ZP_08709632.1| recombination and DNA strand exchange inhibitor protein
           [Peptoniphilus sp. oral taxon 375 str. F0436]
 gi|341587875|gb|EGS31275.1| recombination and DNA strand exchange inhibitor protein
           [Peptoniphilus sp. oral taxon 375 str. F0436]
          Length = 786

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 179/563 (31%), Positives = 277/563 (49%), Gaps = 83/563 (14%)

Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
           L+T R  R  + +K  +K  +  G+  + SSSGAT F+EP   VE NN    L N E  E
Sbjct: 184 LVTIRAGRYVIPVKQENKSSI-KGLIHDTSSSGATVFIEPLAVVELNNQLRELENKERQE 242

Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
              IL  L+ ++A++   +K     ++E+D  FA+   A     + P +S +  +  D  
Sbjct: 243 IHRILQELSDQLAENLPALKQNNYAMVELDFIFAKGRLALEEKAIKPRISQEKKLKIDQG 302

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
                 +HPLL               +P K                     VPID+ +  
Sbjct: 303 ------RHPLL---------------DPRKV--------------------VPIDLDLGY 321

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
           E + ++ITGPNTGGKT S+KT GL  LM++AGL++PA  +  +P    I ADIGD QS+E
Sbjct: 322 EFKSLIITGPNTGGKTVSLKTTGLLILMAQAGLFVPAGPNTVIPLVHEIYADIGDEQSIE 381

Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
           QNLSTFS H+  IVDIL  ++ + LVL DE+G+GTDP+EG ALA +I+  +R+R  L + 
Sbjct: 382 QNLSTFSSHMVNIVDILSKITDQDLVLFDELGAGTDPTEGAALAMTIIDKMRERGILTMA 441

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTHY  L     +     NA  EF LETL PTY +  G+ G SNA  I++ +G     IQ
Sbjct: 442 TTHYNQLKVYALETPGVANAGMEFDLETLSPTYHLRIGTPGKSNAFEISRRLGLGEDYIQ 501

Query: 530 RAQKLVERLRPERQQHRKSELYQSLME----ERRKLESQARTAASLHAEIMDLYREIEDE 585
            A+  +         H  S  ++ ++E    ER+ L  + +   +   EI  L   ++ E
Sbjct: 502 AAKSFI---------HSDSLKFEDVLEGLERERQDLSRKNQAEEAKQREIEALKARLQRE 552

Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN--------------QLRDASA 631
            +  +R+   +  +  ++ ++ L  AK Q D  + + ++              Q R+   
Sbjct: 553 VEKSERQRDRILDQANEKAEKILREAKEQADLALLELKDIQASVASQEEKRLQQTRNYLG 612

Query: 632 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 691
           + + SL K+++  +  I +  RP +D  V +T            V  KSL  K   V+E+
Sbjct: 613 ENLRSLSKKNKKGL-VIEKVARPIEDVKVGDT------------VFSKSLQQK-GQVLEL 658

Query: 692 PGDDDTVLVQYGKMRVRVKKNNI 714
           P     VLVQ G +++ +  N++
Sbjct: 659 PDKQGNVLVQLGILKMSLPVNSL 681


>gi|118479701|ref|YP_896852.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           thuringiensis str. Al Hakam]
 gi|196044939|ref|ZP_03112173.1| MutS2 family protein [Bacillus cereus 03BB108]
 gi|225866525|ref|YP_002751903.1| MutS2 family protein [Bacillus cereus 03BB102]
 gi|229186805|ref|ZP_04313960.1| hypothetical protein bcere0004_43460 [Bacillus cereus BGSC 6E1]
 gi|229198701|ref|ZP_04325400.1| hypothetical protein bcere0001_42260 [Bacillus cereus m1293]
 gi|376268476|ref|YP_005121188.1| Recombination inhibitory protein MutS2 [Bacillus cereus F837/76]
 gi|423573771|ref|ZP_17549890.1| MutS2 protein [Bacillus cereus MSX-D12]
 gi|189030425|sp|A0RJF2.1|MUTS2_BACAH RecName: Full=MutS2 protein
 gi|254766189|sp|C1ETZ0.1|MUTS2_BACC3 RecName: Full=MutS2 protein
 gi|118418926|gb|ABK87345.1| DNA mismatch repair protein, MutS family [Bacillus thuringiensis
           str. Al Hakam]
 gi|196024427|gb|EDX63100.1| MutS2 family protein [Bacillus cereus 03BB108]
 gi|225787320|gb|ACO27537.1| MutS2 family protein [Bacillus cereus 03BB102]
 gi|228584777|gb|EEK42896.1| hypothetical protein bcere0001_42260 [Bacillus cereus m1293]
 gi|228596542|gb|EEK54207.1| hypothetical protein bcere0004_43460 [Bacillus cereus BGSC 6E1]
 gi|364514276|gb|AEW57675.1| Recombination inhibitory protein MutS2 [Bacillus cereus F837/76]
 gi|401213523|gb|EJR20263.1| MutS2 protein [Bacillus cereus MSX-D12]
          Length = 786

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 208/718 (28%), Positives = 347/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|329927098|ref|ZP_08281454.1| recombination and DNA strand exchange inhibitor protein
           [Paenibacillus sp. HGF5]
 gi|328938675|gb|EGG35054.1| recombination and DNA strand exchange inhibitor protein
           [Paenibacillus sp. HGF5]
          Length = 637

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 190/614 (30%), Positives = 306/614 (49%), Gaps = 68/614 (11%)

Query: 17  LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           LE  + LL  T  A  +  ++  P     I DI   L  A  G  L+P E+ A   T+  
Sbjct: 40  LEAVKDLLAATDQAYTVDRLKGNP-SFRGITDINDALKRARIGGTLNPHELLATSNTIHG 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
              + K+   A   D    ++   L  L    +    LE+ I  CID +   +LD AS +
Sbjct: 99  SRRI-KRFIAAIHED----EKIDILFNLSDLISEQKPLEDAIRLCID-ETAEVLDSASAE 152

Query: 135 LELIRAERK----RNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
           L  IR E +    R  E L+S+++ +  A++ Q       LIT R  R  + +KA ++  
Sbjct: 153 LSQIRRELRGGEVRIREKLESMIRSQSVAKMLQ-----DQLITIRGDRFVIPVKAEYRSH 207

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
              GI  + S SGAT F+EP+  V  NN        E  E   IL  LTA++ +    + 
Sbjct: 208 F-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRMREEREIEVILQKLTAQVGEQAELLS 266

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
             +D + ++D  FA+A  A  M    P ++ + ++           +HPL+         
Sbjct: 267 IDVDLIGQLDFIFAKARLAHVMKASLPRMNDRGYIKLRRG------RHPLI--------- 311

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                  P                   +D  VP+D+++      +++TGPNTGGKT ++K
Sbjct: 312 -------P-------------------TDQVVPLDVELGNSYTSIIVTGPNTGGKTVTLK 345

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+GL +LM+ +GL++PA+   ++  FD I ADIGD QS+EQ+LSTFS H++ I+ IL  +
Sbjct: 346 TIGLLNLMAMSGLFIPAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRILSQM 405

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFEN 488
           + +SLVL+DE+G+GTDP+EG ALA SIL+++  R+G  ++ TTHY++L     +     N
Sbjct: 406 TPKSLVLLDEVGAGTDPAEGSALAISILEHIH-RMGCRMIATTHYSELKAYAYERKGVIN 464

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF + TL PTYR+L G  G SNA  IA+ +G    I++ A+  V     + +  R  
Sbjct: 465 ASMEFDINTLSPTYRLLVGVPGRSNAFAIAERLGLPGSILEFARGEV-----KEEDQRVE 519

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
            +  SL E R   E +   A  +  E+ +L +  + E + L+ +   L  K   + +Q +
Sbjct: 520 HMIASLEENRHTAEVEREKAEQVRKEMEELRQRHQQELQKLEEQKDKLVDKARAEARQIV 579

Query: 609 NFAKVQIDTVVQDF 622
           + A+ + + ++ D 
Sbjct: 580 DKARSEAEEIIADL 593


>gi|384176446|ref|YP_005557831.1| MutS2 family protein [Bacillus subtilis subsp. subtilis str.
           RO-NN-1]
 gi|349595670|gb|AEP91857.1| MutS2 family protein [Bacillus subtilis subsp. subtilis str.
           RO-NN-1]
          Length = 785

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 213/703 (30%), Positives = 351/703 (49%), Gaps = 82/703 (11%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
           DI G L  A  G +LSPSE   +   L AV  +   +T+ AE DG  +    PL+ +  +
Sbjct: 70  DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124

Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
               L++LE  I  CID    + LD ASE L  IR + +    R  + L+S+L+  +A  
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183

Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
                +   ++T R  R  + +K  ++     GI  + SSSGAT F+EP+  V+ NN   
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238

Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
           +    E  E   IL +LT + A+   E+ +L  +VL+ +D  FA+A +A+ +    PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297

Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
                     I ++  +HPLL                P +  V N               
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPEQVVAN--------------- 320

Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
               DI++  +   +VITGPNTGGKT ++KTLGL +LM+++GL++PA        F+ + 
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376

Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
           ADIGD QS+EQ+LSTFS H+  IV ILE V+  SLVL DE+G+GTDP EG ALA SIL  
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436

Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
           +       + TTHY +L           NA+ EF +ETL PTY++L G  G SNA  I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496

Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
            +G    II +A+  +       + +    +  SL + +++ E +     S+  E   L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551

Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI- 638
           +E++ +  +L+ +   +  +  QQ  +++  A  + + ++ +  +   +  + + + LI 
Sbjct: 552 KELQQQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRSIKEEHKSFKDHELIN 611

Query: 639 --KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 696
             K  E A+    ++ +P+     ++     F P  G++V V + G K  T++E  G ++
Sbjct: 612 AKKRLEGAVPTFEKSKKPEK----TKAQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNE 664

Query: 697 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTC 739
              VQ G ++++VK+ ++  I ++       P P+  K +   
Sbjct: 665 WN-VQIGILKMKVKEKDLEFIKSA-------PEPKKEKIITAV 699


>gi|228917190|ref|ZP_04080747.1| hypothetical protein bthur0012_44020 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228935862|ref|ZP_04098672.1| hypothetical protein bthur0009_43070 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228823630|gb|EEM69452.1| hypothetical protein bthur0009_43070 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228842391|gb|EEM87482.1| hypothetical protein bthur0012_44020 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 786

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 208/718 (28%), Positives = 347/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|239636360|ref|ZP_04677362.1| MutS2 protein [Staphylococcus warneri L37603]
 gi|239597715|gb|EEQ80210.1| MutS2 protein [Staphylococcus warneri L37603]
          Length = 782

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 198/656 (30%), Positives = 325/656 (49%), Gaps = 79/656 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  +A  ++ +  G +L+ +E+ A++R ++ V N +K       L+ D   +Y  L 
Sbjct: 65  LSGLSKVAQYIHRSTIGGVLNVTELNAIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
             +     LT+L + I    D   L   D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 SQMAQLPILTDLFKDINDKCDAHDL--YDHASYELQSIRSKISSTNQRIRQNLDRVVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT+++A  E +   L + ++  +D   A+A +A+ + G  
Sbjct: 236 NQISRLRNDEAVERERILAELTSQVA-VESDALLLAESIMGHLDFLIAKARYARAIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P    +  V   ++       HPLL        +   +N+     D+E            
Sbjct: 295 PTFHKERTVYLPNAY------HPLL------DHNTVVANTIEFVDDIE------------ 330

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                             V+ITGPNTGGKT ++KTLGL  +M+++G+ +P  +  +L  F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R+   L + TTHY +L           NA+ EF +ETL PTY++L G  G SNA 
Sbjct: 434 ILDHVRNLGALVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
           +I+K +G    II +A+ ++     E     +S    S  + E+R +L+   + A + H 
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINNMIESLEKNSKRVDEQRIELDRLVKEAQATHD 553

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
           E+   Y++ ++  K L   A   K K  Q+V+     A  + D ++++   +LRD    +
Sbjct: 554 ELAKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADAILKELR-ELRDQKGAD 605

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDK 684
               +KE E     I +  + DD +       +    ++     G++V V S G K
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQNVQKQKYDKIQAGDEVKVLSYGQK 653


>gi|386715018|ref|YP_006181341.1| DNA mismatch repair protein MutS [Halobacillus halophilus DSM 2266]
 gi|384074574|emb|CCG46067.1| DNA mismatch repair protein MutS [Halobacillus halophilus DSM 2266]
          Length = 781

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 206/687 (29%), Positives = 333/687 (48%), Gaps = 80/687 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   L     G +LS  E   V  T+     + + + EA E +   L+      
Sbjct: 65  LGGIFDIKPSLKRTTIGGILSALESLDVASTIYGGRQLKRFIEEAEEPEMPKLR------ 118

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKK 155
           E++     L ELE+ I  CID +   ++D AS+ L  IR+ R R  E+     +DS  K 
Sbjct: 119 EIVTGILPLKELEQSIRSCID-EHGNVMDGASDKLRTIRS-RVRTYESRVRDKMDSFTKS 176

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
               +  A      ++T R  R  + +K  ++  +  GI  + SSSGAT F+EP+  V+ 
Sbjct: 177 KTKMLSDA------IVTIRNERYVLPVKQEYRGAI-GGIVHDQSSSGATLFIEPQSVVDL 229

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL  L+ EIA     +   + R+  +D  FARA   + M    
Sbjct: 230 NNQLQEARVQEKHEIEKILKELSEEIADHYSALYENVTRLGHVDFMFARAKLGKQMKASM 289

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P ++ +  +    +      +HPL+                       N E  V      
Sbjct: 290 PSMNDEGRIKMLQA------RHPLI-----------------------NEEEVV------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                 P DI++  +   +VITGPNTGGKT ++K +GL +LM+++GL +PA +   +  F
Sbjct: 315 ------PNDIEIGEDYTSIVITGPNTGGKTVTLKLVGLCTLMAQSGLQIPALDGCEMAVF 368

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + + ADIGD QS+EQ+LSTFS H++ IVDIL+ V  ++LVL DE+G+GTDP EG ALA S
Sbjct: 369 EEVYADIGDEQSIEQSLSTFSSHMTNIVDILKHVDDKTLVLFDELGAGTDPQEGAALAMS 428

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    + TTHY +L           NA+ EF ++TL+PTYR+L G  G SNA 
Sbjct: 429 ILDEVVNRNARVIATTHYPELKAYGYNREGVINASVEFDIQTLKPTYRLLIGVPGRSNAF 488

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            I++ +G    +I  AQ   E++  + Q      +  SL E +R  E     A  L  E 
Sbjct: 489 EISRKLGLHESVITSAQ---EKIGVDSQS--VENMIASLEESKRGAEQDYEEAERLLQEA 543

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ-----LRDAS 630
            DL  E++++    +++   L  K  ++ ++ +  A+ + +T+V +  N      +++  
Sbjct: 544 QDLRNELKNKWDQFEQKREELYEKAEEKAEKAIRQAREEAETIVGEIRNMKSQAGMKEHE 603

Query: 631 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 690
             E   +  E++  +A   +  +P+    V E  +       G++V + +L ++  T+VE
Sbjct: 604 WIEARKMFDEAQPELAKKKKESKPEPQKEVKELKS-------GDEVKLLTL-NQNGTIVE 655

Query: 691 VPGDDDTVLVQYGKMRVRVKKNNIRPI 717
             G ++   VQ G M+V+ K+ ++  I
Sbjct: 656 QTGKNE-YQVQVGVMKVKAKRKDLEFI 681


>gi|423395169|ref|ZP_17372370.1| MutS2 protein [Bacillus cereus BAG2X1-1]
 gi|423406028|ref|ZP_17383177.1| MutS2 protein [Bacillus cereus BAG2X1-3]
 gi|401655940|gb|EJS73468.1| MutS2 protein [Bacillus cereus BAG2X1-1]
 gi|401660697|gb|EJS78175.1| MutS2 protein [Bacillus cereus BAG2X1-3]
          Length = 786

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 212/720 (29%), Positives = 351/720 (48%), Gaps = 89/720 (12%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILERHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ   +  I    +T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKHIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
           L E ++  E     A +L  +   L+RE++ +  +   DR    LKA+  ++ ++++  A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIVEFNEDRDERLLKAQ--KEGEEKVEAA 583

Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
           K + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLVNVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633

Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           +  P+     G++V V + G K   + ++   D    VQ G ++++VK++N+  I   K+
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKIS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|154686993|ref|YP_001422154.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           amyloliquefaciens FZB42]
 gi|189030421|sp|A7Z7E7.1|MUTS2_BACA2 RecName: Full=MutS2 protein
 gi|154352844|gb|ABS74923.1| MutSB [Bacillus amyloliquefaciens FZB42]
          Length = 785

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 211/722 (29%), Positives = 356/722 (49%), Gaps = 79/722 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L + QK L++   A A+M+ +       + DI   L  A  G +L+P+E   +   L AV
Sbjct: 40  LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             +   +++  E DG  +    PL++   +    L +LE +I  CID    + LD AS  
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153

Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++   
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT   A+  +EI  
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            ++ +  +D  FA+A +A+ M    P+++       D  I ++  +HPLL          
Sbjct: 269 DVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P    V N                   DI++  +   +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL ++M++AGL++PA        FD + ADIGD QS+EQ+LSTFS H+  IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETL PTY++L G  G SNA  I++ +G    II +A+  +        +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521

Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
              SL + +++ + +     S+  E   L+++++ +  +L+ +   +  +  Q+  ++L 
Sbjct: 522 MIASLEKSKKRADEELSETESIRKEAEKLHKDLQQQIIELNAQKDKMMEEAEQKAAEKLE 581

Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            A  + + ++++    + + R     E+    K    A+ A  ++ +P+           
Sbjct: 582 AAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPER----KTEKKR 637

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN---IRPIPNSKRK 723
              P  G++V V + G K A ++E  G+ +   VQ G ++++VK+ +   ++  P  K++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSAPEPKKE 693

Query: 724 NA 725
            A
Sbjct: 694 KA 695


>gi|452990484|emb|CCQ98332.1| MutS2 protein [Clostridium ultunense Esp]
          Length = 829

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 225/721 (31%), Positives = 359/721 (49%), Gaps = 100/721 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSL---QRYS 97
           L  I DI   +  A  G +LSP E   +  TL A   +   L E A  D +SL   + Y+
Sbjct: 108 LGGIHDIRPSIRRARMGGVLSPQEFLDLADTLAAGRRLKHFLLELA--DKESLPILKEYA 165

Query: 98  PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR----NMENLDSLL 153
             +E LKN      LE KI   ID +   +LD AS  L  IRAE K       E LD ++
Sbjct: 166 ERIEGLKN------LETKIHGTID-EYGEVLDGASPLLRKIRAEIKGLESGIKERLDRMV 218

Query: 154 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 213
           K  + Q      I + ++T R  R  + +K  ++     G+  + S+SGAT F+EP+  V
Sbjct: 219 KDPSYQKM----IQEQIVTLRNGRYVIPVKQEYRTAF-GGLVHDQSASGATLFIEPEAVV 273

Query: 214 EFNNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
             NN    L ++++ EE  I   L  LT   A+    +   ++ + E+D  F +A +A  
Sbjct: 274 RLNN---ELRDAKLKEEKEIERILRELTHTTAEEADALSVNVESLAELDFIFTKAKYALS 330

Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
           +    PIL  +  +    +      +HPL+    +                         
Sbjct: 331 IKASRPILKRKKAIKLKKA------RHPLIPKEKV------------------------- 359

Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
                     VPID++V     ++VITGPNTGGKT ++KT+GL +LM++AGL +PA    
Sbjct: 360 ----------VPIDVEVGDSFTMLVITGPNTGGKTVTLKTIGLMTLMAQAGLQIPAGEGS 409

Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
            +  F  + ADIGD QS+EQ+LSTFS H++ IV I+E ++ +SL+L+DE+G+GTDP+EG 
Sbjct: 410 EVAVFSQVFADIGDEQSIEQSLSTFSSHMTHIVKIIEEMTPDSLILLDELGAGTDPTEGA 469

Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
           ALA +IL+ L  R    V TTHY++L           NA+ EF +ETL PTYR+L G  G
Sbjct: 470 ALAIAILEELYRRDARVVATTHYSELKVYAYNHPGVMNASVEFDVETLSPTYRLLLGIPG 529

Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
            SNA  IA+ +G  ++II +A+  V+    E +Q     +  +L E R++ E +   A  
Sbjct: 530 RSNAFLIAERLGLPKEIIDKARGQVDEESRELEQ-----MITNLAESRKEAEMKREEAER 584

Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
           +  E++ L   +++E + L+R    L  +  ++ ++ +  A+ + + V+Q    +LR   
Sbjct: 585 IQEEMVRLRNSLQEEKERLERERDRLLREAAREAEEVVKKARREAEEVIQ----ELRRLG 640

Query: 631 ADEINSLIKESESAIAAIVEA-HRPDDDFSVSETN--------TSSFTPQFGEQVHVKSL 681
            +E  + IKE       ++EA  R D+   + ET         +S    + G++V+V SL
Sbjct: 641 EEE-GARIKEHR-----LIEAKKRLDEAIPILETGRRERGDVPSSPHGLKAGDEVYVHSL 694

Query: 682 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN------AANPAPRLRKQ 735
             K   V+E  G+D+  LVQ G ++ ++   ++      K ++       AN   R+R +
Sbjct: 695 KLK-GIVLEALGEDE-YLVQVGILKTKLNGRDLEKREEEKTRHEKAVIRTANRRERVRTE 752

Query: 736 V 736
           +
Sbjct: 753 L 753


>gi|228923296|ref|ZP_04086584.1| hypothetical protein bthur0011_42750 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|423582763|ref|ZP_17558874.1| MutS2 protein [Bacillus cereus VD014]
 gi|423634569|ref|ZP_17610222.1| MutS2 protein [Bacillus cereus VD156]
 gi|228836250|gb|EEM81603.1| hypothetical protein bthur0011_42750 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|401211578|gb|EJR18325.1| MutS2 protein [Bacillus cereus VD014]
 gi|401280548|gb|EJR86468.1| MutS2 protein [Bacillus cereus VD156]
          Length = 786

 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 211/720 (29%), Positives = 351/720 (48%), Gaps = 89/720 (12%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMADNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
           L E ++  E     A +L  +   L+R+++ +  +   DR    LKA+  ++ ++++  A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRDLQRQIIEFNEDRDERLLKAQ--KEGEEKVEAA 583

Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
           K + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633

Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           +  P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|52140954|ref|YP_085875.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           cereus E33L]
 gi|196042123|ref|ZP_03109407.1| MutS2 family protein [Bacillus cereus NVH0597-99]
 gi|228948276|ref|ZP_04110559.1| hypothetical protein bthur0007_44020 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229124117|ref|ZP_04253309.1| hypothetical protein bcere0016_44020 [Bacillus cereus 95/8201]
 gi|81685978|sp|Q633P2.1|MUTS2_BACCZ RecName: Full=MutS2 protein
 gi|51974423|gb|AAU15973.1| DNA mismatch repair protein, MutS family [Bacillus cereus E33L]
 gi|196027059|gb|EDX65682.1| MutS2 family protein [Bacillus cereus NVH0597-99]
 gi|228659419|gb|EEL15067.1| hypothetical protein bcere0016_44020 [Bacillus cereus 95/8201]
 gi|228811263|gb|EEM57601.1| hypothetical protein bthur0007_44020 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 786

 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 208/718 (28%), Positives = 347/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|422697088|ref|ZP_16755036.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX1346]
 gi|315174484|gb|EFU18501.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecalis TX1346]
          Length = 788

 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 303/607 (49%), Gaps = 92/607 (15%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q  LN+T   L + + +  + +  +E+I   +     G  L+  E+  V R L   + + 
Sbjct: 44  QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103

Query: 80  KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
           +   E +E  +D + L  +   LE+L   N     + K G   D     + D AS  L+ 
Sbjct: 104 RFFDELSENEVDFERLYIWREQLEVLPELN----RQLKQGIDDDG---YVTDEASPALKA 156

Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR   +R+     E LDS+++   A+      +   L+T R  R  + +K  +K +   G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
           +  + S+SG T F+EPK  +E NN   RL   +IAE    T IL+ L+AE+    REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
               + ++D   A+A   + +  V P +S  +HV F  +      +HPLL          
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P K+                    V  DI +  E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL  LM +AGL +P +   ++  F  + ADIGD QS+EQ+LSTFS H++ IV +L+ V 
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
            +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L           NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF ++TL PTYR+L G  G SNA  I+K +G D  II+ A++++     + +    +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521

Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
            + L E RRK+      +AR     +A+LH E+ + Y+   +E           + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569

Query: 603 QVQQELN 609
           + ++E N
Sbjct: 570 KARKEAN 576


>gi|381211900|ref|ZP_09918971.1| DNA mismatch repair protein [Lentibacillus sp. Grbi]
          Length = 780

 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 215/704 (30%), Positives = 342/704 (48%), Gaps = 92/704 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQRYS 97
           L  + DI   +  +V G +L+  E   V  TL   R   N   K+ E             
Sbjct: 65  LGGVADIRAAVKRSVIGGVLTAGECLDVASTLYGGRQAKNFLGKMEEDL----------- 113

Query: 98  PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 152
           P+L+ L +    L +LE  I  CID +   ++D AS  L  IR+       R  + LDS 
Sbjct: 114 PILKGLAEKIISLRKLETDINSCIDDRG-NVMDSASVKLRSIRSSIRTYESRVRDKLDSY 172

Query: 153 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
            K       Q+  +   +IT R  R  + +K  ++  +  GI  + S+SGAT FMEPK  
Sbjct: 173 TKS------QSKMLSDAIITIRNDRYVLPVKQEYRGAI-GGIVHDQSASGATLFMEPKAV 225

Query: 213 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
           V+ NN       +E  E   IL  L+ +IA  E  +   +  + +ID   ARA   + M 
Sbjct: 226 VDLNNQLQEAKVNEKKEIERILRELSGKIADDEAILTENVTVLAKIDFITARAKLGRGMK 285

Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
              P ++       +  IN++  +HPL+                P               
Sbjct: 286 AAMPAIND------NGIINVKQARHPLI----------------P--------------- 308

Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
                D  V  D+ +  +   +VITGPNTGGKT ++K +GL +LM+++GL +PA +   +
Sbjct: 309 ----DDEVVSNDVVLGKDYTSIVITGPNTGGKTVTLKMIGLFTLMAQSGLQIPAADGCEM 364

Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
             FD + ADIGD QS+EQNLSTFS H+  IV IL  +  +SLVL DE+G+GTDP EG AL
Sbjct: 365 AVFDDVFADIGDEQSIEQNLSTFSSHMINIVSILSGIDDKSLVLFDELGAGTDPQEGAAL 424

Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
           A SIL  +  R    V TTHY +L           NA+ EF +ETL+PTYR+L G  G S
Sbjct: 425 AMSILDDVVSRGARVVATTHYPELKAYGFNRDNVINASVEFDVETLQPTYRLLIGVPGRS 484

Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 572
           NA  IA  +G  + II RA+  V  +  E  ++  + L QS    RR+ E+    A  + 
Sbjct: 485 NAFEIAGRLGLAQSIIDRAKNQV-GVNSESVENMIASLEQS----RRQAEADYEEAHEIL 539

Query: 573 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-----QLR 627
            E  +L  ++    +  + +   L  K  ++  + L  A+ + +T+V +  +     QL+
Sbjct: 540 QESEELRNDLIKAWQQYENKREDLYKKAEEKADKALQKARDEAETIVDEIRHMKTDAQLK 599

Query: 628 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS-FTPQFGEQVHVKSLGDKLA 686
           +    E   +++E++  +++  +A++P       + NT+  F P  G+++ + S  ++  
Sbjct: 600 EHEWIEARKMLEEAQPKLSS-KKANKPK-----QQPNTAKEFKP--GDEIKLLS-ANQQG 650

Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
           T++E   +++  L+Q G M+V+VK++ I+ I   K K++    P
Sbjct: 651 TILEKLNENE-YLIQVGIMKVQVKRSEIQLI---KHKSSVTEKP 690


>gi|301056059|ref|YP_003794270.1| MutS family DNA mismatch repair protein [Bacillus cereus biovar
           anthracis str. CI]
 gi|423549710|ref|ZP_17526037.1| MutS2 protein [Bacillus cereus ISP3191]
 gi|300378228|gb|ADK07132.1| DNA mismatch repair protein, MutS family [Bacillus cereus biovar
           anthracis str. CI]
 gi|401190506|gb|EJQ97548.1| MutS2 protein [Bacillus cereus ISP3191]
          Length = 786

 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 208/718 (28%), Positives = 347/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 IVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|302384796|ref|YP_003820618.1| MutS2 family protein [Clostridium saccharolyticum WM1]
 gi|302195424|gb|ADL02995.1| MutS2 family protein [Clostridium saccharolyticum WM1]
          Length = 796

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 215/705 (30%), Positives = 335/705 (47%), Gaps = 105/705 (14%)

Query: 27  TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR--TLRAVNNVWKKLTE 84
           T AA  + Q   +    + DI   L     G  L  +EI ++    T+ A    + +  E
Sbjct: 51  TDAATRVRQKGSISFGGVRDIRPSLKRLDVGSALGMAEILSISSLLTVSARVKAYGR-HE 109

Query: 85  AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
            +EL  DSL+    +LE L   N  TE++     CI  +  +  D AS  L  +R    R
Sbjct: 110 DSELPEDSLEESFRMLEPLTPVN--TEIKR----CILSEEEVS-DDASPGLHHVR----R 158

Query: 145 NMENLDSLLKKVAAQIFQAG--GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
           +M +++  +      I  +    +   +IT R  R C+ +K+ HK  +  G+  + SS+G
Sbjct: 159 SMRSINDKIHTQLNSILNSNRTYLQDAVITMRDGRYCLPVKSEHKSQV-SGMVHDQSSTG 217

Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
           +T F+EP   V+ NN    L   E  E   +L+ L+ ++A    E++   + + ++D  F
Sbjct: 218 STLFIEPMAIVKLNNDLRALEIQEQKEIEMVLADLSNQLAPYLNELETDFEILTKLDFIF 277

Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
           A+A  ++  +   PI +++        INI+  +HPLL               +P K   
Sbjct: 278 AKAALSKHYNASEPIFNTKR------IINIKDGRHPLL---------------DPSKV-- 314

Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
                             VPI I +  +  ++++TGPNTGGKT S+KT+GL +LM ++GL
Sbjct: 315 ------------------VPITIHLGRDFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGL 356

Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
           ++PA +   L  FD + ADIGD QS+EQ+LSTFS H++ IV IL      SL L DE+G+
Sbjct: 357 HIPAFDGSELAVFDEVFADIGDEQSIEQSLSTFSAHMTNIVHILGQADSNSLCLFDELGA 416

Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
           GTDP+EG ALA SIL +L +     + TTHY++L          ENA  EF++ETL+PTY
Sbjct: 417 GTDPTEGAALAISILSFLHNMKCRTMATTHYSELKVFALTTPGVENACCEFNVETLKPTY 476

Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM----EER 558
           R+L G  G SNA  I++ +G    II  A+  +E          K E ++ L+    E R
Sbjct: 477 RLLIGVPGKSNAFAISQKLGLPDYIIDDAKTHLE---------AKDETFEDLLTHLEENR 527

Query: 559 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 618
             +E +    AS   E+  L   +  + + LD R  H+  +  ++ Q+ L  AK   D  
Sbjct: 528 VTIEKERIQIASYKLEVEQLKTRLTQKEERLDERRDHMIREAKEEAQRILRDAKETADQT 587

Query: 619 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRP-------DDDFSVSETNTSSFTPQ 671
           ++             IN L   ++S +A  +EA R        D D S+S  N      Q
Sbjct: 588 IR------------SINKL--AADSGVAKELEAQRSKLRNKLQDVDSSLSLKNEKK---Q 630

Query: 672 FGEQVHVK--SLGDKL--------ATVVEVPGDDDTVLVQYGKMR 706
            G+Q+  +   LGD +         TV  +P     + VQ G +R
Sbjct: 631 PGKQIDPRKLKLGDGVKVLSMNLNGTVSSLPNAKGDLYVQMGILR 675


>gi|423417539|ref|ZP_17394628.1| MutS2 protein [Bacillus cereus BAG3X2-1]
 gi|401107818|gb|EJQ15763.1| MutS2 protein [Bacillus cereus BAG3X2-1]
          Length = 786

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 209/718 (29%), Positives = 347/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  ELQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ   +  I    +T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREKVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLINVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|423673678|ref|ZP_17648617.1| MutS2 protein [Bacillus cereus VDM062]
 gi|401310543|gb|EJS15859.1| MutS2 protein [Bacillus cereus VDM062]
          Length = 786

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 212/697 (30%), Positives = 345/697 (49%), Gaps = 85/697 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  L    P+L
Sbjct: 65  LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
           NN   E R+   +  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +  
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291

Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
             PI++++ ++    +      +HPL+               +P                
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314

Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
               +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   + 
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370

Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
            F  I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430

Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
            SIL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490

Query: 514 ALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
           A  I+K +G   ++I RA+  +  +  + E    +  E  ++   ER++ E   + +  L
Sbjct: 491 AFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEHRKQSEKL 550

Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
           H E+     E  DE     R    LKA+  ++ ++++  AK + + ++Q+   QLR A  
Sbjct: 551 HRELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKQEAEGIIQEL-RQLRKAQL 602

Query: 632 DEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKL 685
             +  + LI+     E A   +V+  +      V   NT+     + G++V V + G K 
Sbjct: 603 INVKDHELIEAKSRLEGAAPELVKKQK------VHVKNTAPKQQLRSGDEVKVLTFGQKG 656

Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
             + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 657 QLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|227510203|ref|ZP_03940252.1| MutS family DNA mismatch repair protein [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227190408|gb|EEI70475.1| MutS family DNA mismatch repair protein [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 788

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 207/690 (30%), Positives = 332/690 (48%), Gaps = 91/690 (13%)

Query: 50  ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
           I N+++SG  LS   I  + R +R +N+ +           D     + + +++     +
Sbjct: 80  IENASLSGTELS--HITKLLRAVRTINDFFDNFQ-------DEDVNLTVVSQIVSQLTLM 130

Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
            E+ +++   I+     ILD AS +L  IR    R   ++ S + K     +  G   K 
Sbjct: 131 PEITKRMVQSINDDG-SILDTASSELRTIRRTINRTQNDIRSRMGK-----YLKGSDSKY 184

Query: 170 L----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
           L    IT R  R  + I+A +K     GI  + S+SG T ++EP   VE NN   R   +
Sbjct: 185 LTESIITMREDRFVLPIRADYKQHFG-GIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLA 243

Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
           E AEE  IL+ LT  I     E+   M+ V ++D   A+A FA  +  V P       +S
Sbjct: 244 ERAEERRILAELTDLIRPYRSELLNNMNLVGQLDFVNAKAKFAHQIGAVQP------EIS 297

Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
            ++ +N+   +HPL+                                     D  V  DI
Sbjct: 298 RENVVNLRRARHPLI-----------------------------------ARDKAVANDI 322

Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
           ++    R ++ITGPNTGGKT ++KT+GL  LM ++GL++ A    ++  FD + ADIGD 
Sbjct: 323 QIGDGYRTIIITGPNTGGKTITLKTVGLLQLMGQSGLFITANEESQIGVFDDVFADIGDD 382

Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
           QS+E NLSTFS H+  I+ IL  +S +SL+L+DE+G+GTDP EG ALA +I+  +     
Sbjct: 383 QSIEANLSTFSSHMDNIISILNGMSSQSLILLDELGAGTDPKEGAALAMAIIDAIHQSGC 442

Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
             + TTHY +L       +   NA+ EF +ETLRPTYR L G  G SNALNIA  +G  +
Sbjct: 443 ELIATTHYPELKAYAYNRSGIINASMEFDIETLRPTYRFLMGIPGQSNALNIASKLGLSK 502

Query: 526 KIIQRAQKLVERLRPERQ--QHRKSEL---YQSLMEERRKLESQARTAASLHAEIMDLYR 580
           +II++A+   +    E Q   +   EL    +   +E  +L+ Q   +  LH ++ + + 
Sbjct: 503 EIIEKARAFTD---SENQDINNMIDELTAQTKRAHDEADQLDEQLTDSTKLHDDLQNQFT 559

Query: 581 EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKE 640
           + +++ KD      HL  +  +Q  Q +  AK+  D ++ D   + +        S IKE
Sbjct: 560 QYQNQ-KD------HLLEQAREQANQVVEKAKISADKIIADLHKKQQQVG----QSAIKE 608

Query: 641 SE--SAIAAI----VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 694
           +E   A  A+    V  +   +     E     F P  G++V VKS G +  T++     
Sbjct: 609 NELIDAKGALNRLEVTPNLKKNKVLRKEKAKHDFHP--GDEVLVKSYGQQ-GTLIRQE-K 664

Query: 695 DDTVLVQYGKMRVRVKKNNI-RPIPNSKRK 723
           +    VQ G +++++ +N++ +  P  K K
Sbjct: 665 NGAWEVQLGILKMQIDENDLEKAAPEKKAK 694


>gi|421730736|ref|ZP_16169862.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           amyloliquefaciens subsp. plantarum M27]
 gi|407074890|gb|EKE47877.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           amyloliquefaciens subsp. plantarum M27]
          Length = 785

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 187/581 (32%), Positives = 291/581 (50%), Gaps = 65/581 (11%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L + QK L++   A A+M+ +       + DI   L  A  G +L+P+E   +   L AV
Sbjct: 40  LADIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             +   +++  E DG  +    PL++   +    L  LE +I  CID    + LD AS  
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHGEELITLGNLEREINSCIDDHGEV-LDHASPA 153

Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++   
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT   A+  +EI  
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            ++ +  +D  FA+A +A+ M    P ++       D  I ++  +HPLL          
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL---------- 312

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P    V N                   DI++  +   +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL ++M++AGL++PA        FD + ADIGD QS+EQ+LSTFS H+  IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETL PTY++L G  G SNA  I++ +G    II +A+  +        +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521

Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
              SL + +++ + +     SL  E   L++E++ +  +L+
Sbjct: 522 MIASLEKSKKRADEELSETESLRKEAEKLHKELQQQIIELN 562


>gi|152976937|ref|YP_001376454.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           cytotoxicus NVH 391-98]
 gi|189030426|sp|A7GTK1.1|MUTS2_BACCN RecName: Full=MutS2 protein
 gi|152025689|gb|ABS23459.1| MutS2 family protein [Bacillus cytotoxicus NVH 391-98]
          Length = 786

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 203/689 (29%), Positives = 330/689 (47%), Gaps = 69/689 (10%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + K+  E    +G  L    P+L
Sbjct: 65  LGGIFDIRSNVKRAKIGSMLSPHELLDIASTMYGSRQM-KRFIEDIVDNGAQL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     + LD AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITGCIGDGGEV-LDSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL +LT E+A     +   ++ +  +D  FA+A +A+ M    
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAAEADIVLANVEVIANLDFIFAKALYAKRMKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++++ ++    +      +HPL+               +P                  
Sbjct: 294 PIVNNERYMELRQA------RHPLI---------------DP------------------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                VP DI +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P +    +  F
Sbjct: 315 --KVIVPNDIVLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVQEESEICVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+EQ+LSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SNA 
Sbjct: 433 ILDEVHNRGARVVATTHYPELKAYGYNRNQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            I+K +G   ++I RA+  +         ++   +   L E ++  E   + A  L  + 
Sbjct: 493 EISKRLGLSERVINRARNHI-----STDTNKIENMIAKLEESQKNAERDWKEAEELRKQS 547

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI- 634
             L+RE++ +  + +        K  ++ ++++  AK + + ++++   QLR A    + 
Sbjct: 548 EKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEAIIREL-RQLRKAQLANVK 606

Query: 635 -NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 693
            + LI+       A  E  +       +        P  G++V V + G K   + +V  
Sbjct: 607 DHELIEAKSRLEGAAPELVKKQKVKVKNTAPKQQLRP--GDEVKVLTFGQKGQLLKKV-- 662

Query: 694 DDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            D    VQ G ++++VK++++  I   K+
Sbjct: 663 SDSEWNVQIGILKMKVKESDMEYINTPKQ 691


>gi|229163542|ref|ZP_04291492.1| hypothetical protein bcere0009_43080 [Bacillus cereus R309803]
 gi|228619924|gb|EEK76800.1| hypothetical protein bcere0009_43080 [Bacillus cereus R309803]
          Length = 786

 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 211/720 (29%), Positives = 350/720 (48%), Gaps = 89/720 (12%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
           L E ++  E     A +L  +   L+RE++ +  +   DR    LK +  ++ ++++  A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIVEFNEDRDERLLKVQ--KEGEEKVEAA 583

Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
           K + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633

Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           +  P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|288553660|ref|YP_003425595.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           pseudofirmus OF4]
 gi|288544820|gb|ADC48703.1| MutS2 recombination and DNA strand exchange inhibitor protein
           [Bacillus pseudofirmus OF4]
          Length = 788

 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 206/721 (28%), Positives = 356/721 (49%), Gaps = 90/721 (12%)

Query: 20  SQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVN 76
           SQK  ++ +  L +    PL    I D+      A  G  L+  E+  +  T+   R + 
Sbjct: 45  SQKETSEGATVLRLKGHVPL--GGIFDVTAHAKRAQIGGALAAGELIEIASTIYGGRQLK 102

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
              + + E  EL+   L  Y+  +E L      T++E  +  CID    + LD AS  L 
Sbjct: 103 KFIETMVEEEELELPHLYYYTQQIEPL------TDVERAVKQCIDDNGHV-LDSASPALR 155

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            IR + +    ++ S L+ +         +   ++T R  R  + +K  ++     GI  
Sbjct: 156 TIRQQVRSYESSVRSKLESITRSSNTQKMLSDAIVTIRNDRFVIPVKQEYRSAF-GGIVH 214

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + S+SGAT F+EP+  V  NN        E  E   IL+ L+A I++    I   ++++ 
Sbjct: 215 DQSASGATLFIEPQAIVTINNQLREAKVKEAHEVERILAELSALISEHAEAILINLEQLA 274

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           ++D  F++A +A+ +    P+L+ + +      I+++  +HPLL    +           
Sbjct: 275 QLDFIFSKAHYAKRIKATAPLLNDRGY------IHLKRARHPLLADEEV----------- 317

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                                   VPID+ +  E R ++ITGPNTGGKT ++KT+GL +L
Sbjct: 318 ------------------------VPIDVILGDEYRSLIITGPNTGGKTVTLKTVGLLTL 353

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+++GL++P      +  F  I ADIGD QS+EQ+LSTFS H++ IVDIL  V  +SLVL
Sbjct: 354 MAQSGLHVPVDEESEVAVFKQIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVDFQSLVL 413

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP+EG ALA SIL  +  R    V TTHY++L           NA+ EF +E
Sbjct: 414 FDELGAGTDPTEGAALAISILDDVYKRGACVVATTHYSELKGYAYNREGAMNASVEFDVE 473

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TLRPTYR+L G  G SNA  I++ +G D +II+ A+   E++  E  Q       ++++ 
Sbjct: 474 TLRPTYRLLIGVPGRSNAFAISRRLGLDERIIESAK---EQIDSETNQ------IENMIA 524

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
               LE+  ++A S  AE  ++ ++ E    +L  +   L+ ++ + +++  + AK  ++
Sbjct: 525 ---SLETSQKSAESEWAEASEIRKKAETLRNELMAQIEQLEEQKERVLKEAEDKAKAAVE 581

Query: 617 TVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF----- 668
           +  ++ E    +LR+   + +N  +KE +     +++A +  ++ +   T          
Sbjct: 582 SAKEEAEFIIGELREMQKEGLN--VKEHQ-----LIDAKKHLEEAAPKLTAKQKKVKKEA 634

Query: 669 -------TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
                  T + G+ V V S G K   + +V  ++    VQ G M+++VK ++++ +   K
Sbjct: 635 ARAKAKQTIKAGDDVKVLSFGQKGHVIEQV--NEKEYNVQIGIMKMKVKADDLQLLDKPK 692

Query: 722 R 722
           +
Sbjct: 693 Q 693


>gi|255080414|ref|XP_002503787.1| predicted protein [Micromonas sp. RCC299]
 gi|226519054|gb|ACO65045.1| predicted protein [Micromonas sp. RCC299]
          Length = 863

 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 250/773 (32%), Positives = 366/773 (47%), Gaps = 93/773 (12%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQ---PLDL-STIEDIAGILNSAVSGQLLSPSEIC 66
           +P G + EES  LL +T+AA  +       P D+    +D+   +  A  G++LS S + 
Sbjct: 113 LPLGATPEESATLLAETTAAATLRDVHGGFPRDVFEGTKDVRPWIAGAARGRVLSGSSLA 172

Query: 67  AVRRTLRAVNNVWKKLTEAAELDGDSLQRYS-PLLELLKNCNFLTELEEKIGFCIDCKLL 125
            V  T  A   V   +    +   + L+R + PL+ + +       LE +I  C+     
Sbjct: 173 DVATTAAACAKVHALIHAPNDEALEPLRRLAAPLVGVPET------LEREIRRCVMIPGG 226

Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
            +LD AS+ L  IRAER+     L +LL++ A  + +    ++  I  R  R C+ IKA 
Sbjct: 227 NVLDDASDTLAAIRAERRETERELRALLQQKAQHMQKKNFAERAQIVIRLGRECIPIKAG 286

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
            +  + DG+ L+ SS+G T F EP  AV  NN  + L+  E AE   +LS LTA +   +
Sbjct: 287 AQSEM-DGVVLDSSSTGQTVFKEPAEAVPLNNRILELATEEDAEVERVLSALTAMVVGDD 345

Query: 246 REIKYL--MDRVLEIDLAFARAGFAQWMDGVCP----ILSSQSHVSFDSSINIEGIKHPL 299
                L   + +  +DLA ARA  A W+ G  P    ++SS+S V  +S++ + G++HPL
Sbjct: 346 GGASILNATEAMAALDLASARASHAMWL-GARPAELVVVSSESGVCLESAVRLPGMQHPL 404

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVG------------SLSKGISDFPVPIDIK- 346
           LL   L  L        P    V   E   G               +  + F    D + 
Sbjct: 405 LLERHLPKL--------PRGGKVGEEETVRGFDEREEDGEEEEEEEEEGARFQSRADARE 456

Query: 347 --------VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH---PRLPWF 395
                   V   T +V ITGPNTGGKTAS+K LGLA LM++AGL++PA       R+PW 
Sbjct: 457 AVVPVDFVVPPSTSLVAITGPNTGGKTASLKALGLALLMARAGLHIPAGGDGEPSRVPWT 516

Query: 396 DLILADIGDHQS--LEQNLSTFSGHISRIVDILELV-------SRESLVLIDEIGSGTDP 446
             +LAD+GD QS  L+  LSTFS H+ R+  IL          +R  +VL+DE G GTDP
Sbjct: 517 RRVLADLGDAQSLDLDGGLSTFSAHLVRLRRILRACEDETCDGTRSVVVLLDEPGGGTDP 576

Query: 447 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT--RFENAATEFSLETLRPTYRI 504
           +EG ALA ++L+  + R  L V T+HY ++  L +  +     NAA EF  ETLRPTYR+
Sbjct: 577 AEGAALAAAVLRAAQTRSLLTVATSHYEEVKALAESGSCPGAANAAVEFDAETLRPTYRL 636

Query: 505 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK----------SELYQSL 554
           LWG  G SNA++IA  +G   ++++ A+K   R +                   EL  +L
Sbjct: 637 LWGEFGQSNAISIAAGLGLAPELVEAAEKRWRRAQRAAAAATGDTSFDDADDIQELADAL 696

Query: 555 MEERRKLESQARTAA-------SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
             ER   E +A  A+        LHAE+++    + D    L   AA  +AKE  +   E
Sbjct: 697 ERERETQERRAGEASLALDRAEDLHAEVVERGARLLDLRTRLAMEAAETRAKEGMEEALE 756

Query: 608 L-NFA--KVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
           L N    + ++D VV+         + DE    +   E       E    D D       
Sbjct: 757 LINLVDEREELDEVVRGLMPP--GWTLDERGDAVPADEG------EGTEDDPDGGPGRLR 808

Query: 665 T-SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
           +   +TP  GE V V+ LG   A VVE+ G D  V V+ G +  R     + P
Sbjct: 809 SRRRWTPTVGETVVVRQLGGAEAEVVEIDGAD--VTVRLGGLVTRTPLAGVSP 859


>gi|342732204|ref|YP_004771043.1| recombination and DNA strand exchange inhibitor protein [Candidatus
           Arthromitus sp. SFB-mouse-Japan]
 gi|384455611|ref|YP_005668206.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
           SFB-mouse-Yit]
 gi|417960547|ref|ZP_12603130.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
           SFB-1]
 gi|417964504|ref|ZP_12606221.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
           SFB-4]
 gi|417968357|ref|ZP_12609386.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
           SFB-co]
 gi|418372458|ref|ZP_12964550.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
           SFB-mouse-SU]
 gi|342329659|dbj|BAK56301.1| recombination and DNA strand exchange inhibitor protein [Candidatus
           Arthromitus sp. SFB-mouse-Japan]
 gi|346983954|dbj|BAK79630.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
           SFB-mouse-Yit]
 gi|380330812|gb|EIA21980.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
           SFB-1]
 gi|380339872|gb|EIA28540.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
           SFB-co]
 gi|380341143|gb|EIA29642.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
           SFB-4]
 gi|380342127|gb|EIA30572.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
           SFB-mouse-SU]
          Length = 783

 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 221/725 (30%), Positives = 349/725 (48%), Gaps = 113/725 (15%)

Query: 12  PFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
           PF  +++E  + LN+TS A+  ++  S P D   ++D+   L     G  +S  EI  + 
Sbjct: 36  PFS-TIDEVIQNLNETSEAIEFIKEFSSP-DFVGLDDVYIYLEKIDKGGSVSIKEIYKIG 93

Query: 70  RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI-DCKLLIIL 128
            TL+ +  V   L++ +    + L  Y        N +    LE+ I   I D +   I 
Sbjct: 94  TTLKCIREVKDYLSKRSL---NYLNYY------YDNISTFKYLEDDIFKAIKDGEE--IS 142

Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
           D AS++L  IR E K    ++   L ++      +  + + + T R  R C+ +K+ +K 
Sbjct: 143 DFASDNLFKIRKELKSKTASIKRKLSEILKT--YSKYLQENVFTVRGDRYCIPVKSEYKS 200

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +  GI  N SSSG+TYF+EP   V  NN    L  +E  E   IL L+  +I  S   I
Sbjct: 201 QIQ-GIIHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSIDNI 259

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
              +  +  ++  F +  ++  +DG+ P ++    +   S+      +HPL+        
Sbjct: 260 YLSIKIIYSLEFIFGKGNYSIEIDGIKPDVNDGEDIYLISA------RHPLIN------- 306

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                     + DV                  VP+++    + + ++ITGPNTGGKT ++
Sbjct: 307 ----------REDV------------------VPLNLDFTKDRKAIIITGPNTGGKTVTL 338

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KTLGL  LM+ +GL++PA    R+ + + I ADIGD QSLEQNLSTFS HI  I+ + + 
Sbjct: 339 KTLGLMHLMAHSGLFIPAYEGSRVMFLNEIFADIGDEQSLEQNLSTFSSHIKNIISMTDN 398

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
           +  ++LVL+DE+GSGTDP EG ALA SI+++  +     + TTHY+ L          EN
Sbjct: 399 IKDKTLVLLDEVGSGTDPEEGAALAISIMEHFINSGCKLMGTTHYSQLKTYAINSDNVEN 458

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF ++TLRPTYR+  G  G SNA  IA S+G ++ II+ AQK               
Sbjct: 459 ASVEFDVKTLRPTYRLNVGIPGKSNAFIIADSLGMNQSIIENAQKY-------------- 504

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDL-DRRAAHLKAKETQQV 604
                L E+  K ES  +T      E +   REIE   +E K L D+    L+  E +++
Sbjct: 505 -----LSEDIIKFESIIKTLEEKTTEAIKNNREIEILREENKILNDKLKKRLENIEKEKL 559

Query: 605 Q----------QELNFAKVQIDTVVQDFENQLRDASADEINSL----IKESESAIAAIVE 650
           +          Q ++ AK +ID V       L+  +A E+N +    +K+ ESA   I  
Sbjct: 560 RIIESAKDEGYQIISNAKGEIDKV-------LKIINALEMNGIDLSSVKDLESARREI-- 610

Query: 651 AHRPDDDFSVSE----TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
             + D    ++E     N+S F  +F  G    +K +G  +  ++E P     VLVQ G 
Sbjct: 611 KKKIDKQNKMNEEKSFKNSSKFNIEFKSGMTAFLKRIGQNV-IILENPDSKGNVLVQAGV 669

Query: 705 MRVRV 709
           +++ V
Sbjct: 670 LKLTV 674


>gi|384182359|ref|YP_005568121.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
 gi|324328443|gb|ADY23703.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 786

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 207/718 (28%), Positives = 348/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I++A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++++  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESDMEYINTPKQ 691


>gi|228987801|ref|ZP_04147910.1| hypothetical protein bthur0001_44690 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228771849|gb|EEM20306.1| hypothetical protein bthur0001_44690 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 786

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 211/720 (29%), Positives = 351/720 (48%), Gaps = 89/720 (12%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+L   +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I++A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
           L E ++  E     A +L  +   L+RE++ +  +   DR    LKA+  ++ ++++  A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAA 583

Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
           K + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633

Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           +  P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|56421228|ref|YP_148546.1| recombination and DNA strand exchange inhibitor protein
           [Geobacillus kaustophilus HTA426]
 gi|81675734|sp|Q5KWF8.1|MUTS2_GEOKA RecName: Full=MutS2 protein
 gi|56381070|dbj|BAD76978.1| DNA mismatch repair protein [Geobacillus kaustophilus HTA426]
          Length = 784

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 182/524 (34%), Positives = 270/524 (51%), Gaps = 56/524 (10%)

Query: 17  LEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           LEE    L++T  A A+++ +  + L  + DI   L  A  G  LSP E+  V  T  A 
Sbjct: 40  LEEVAAWLDETDEAAAVLRLAGYVPLDGVVDIRPHLKRAAIGGTLSPQELLEVAAT-SAA 98

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
           +   K+L      +   L+R     + L       ELE  +   ID    + LD AS+ L
Sbjct: 99  SRQMKRLIAGLYDEHGGLERLFRYADTLAEA---PELEHDVRRSIDDHGEV-LDAASDRL 154

Query: 136 ELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
             +R + +    R  E L+S+++  +AQ      +   +IT R  R  + +K  ++    
Sbjct: 155 RSLRGQIRSVEARIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYRGAY- 209

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
            GI  + S+SGAT F+EP+  VE NN        E  E   IL  L+A++A+    +   
Sbjct: 210 GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEPLART 269

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
           ++ +  +D AFA+A +A+ +    P ++S+ ++ F  +      +HPLL           
Sbjct: 270 VEALAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL----------- 312

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
                    D E +               VP DI++  +   +VITGPNTGGKT ++KT+
Sbjct: 313 ---------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVTLKTI 348

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
           GL +LM++AGL++PA +      F  + ADIGD QS+EQ+LSTFS H+  IVDIL  V  
Sbjct: 349 GLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILRHVDG 408

Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
           ESLVL DE+G+GTDP EG ALA +IL  +  R    V TTHY +L           NA+ 
Sbjct: 409 ESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVVNASV 468

Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           EF  ETLRPTY++L G  G SNA +I++ +G D +II+RA+  V
Sbjct: 469 EFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV 512


>gi|227485246|ref|ZP_03915562.1| recombination and DNA strand exchange inhibitor protein MutS2
           [Anaerococcus lactolyticus ATCC 51172]
 gi|227236706|gb|EEI86721.1| recombination and DNA strand exchange inhibitor protein MutS2
           [Anaerococcus lactolyticus ATCC 51172]
          Length = 781

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 202/707 (28%), Positives = 339/707 (47%), Gaps = 70/707 (9%)

Query: 24  LNQTSA-ALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           L +T A A  + ++  +D+  + D   I+       +L PS++  +   LR    V + L
Sbjct: 47  LEKTGAMAKVIARNGNIDIFGLYDFKEIVGYIRRNGILEPSDLLKILGLLR----VSEYL 102

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL---IILDRASEDLELIR 139
            + ++   DS    + L + +   +FL E        ID  +L    I D AS +L  IR
Sbjct: 103 KDYSKNIDDSY--IADLFDRITTNDFLKE-------EIDRSILNEEDIADNASRELLAIR 153

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
              +R  E + + L            +   +++ R  R  V IK + + ++ +GI  + S
Sbjct: 154 RSLRRKEEEIKNKLNSYVTSSKYEDALQDKVVSVRDGRYVVPIKTNKRSVI-NGIVHDKS 212

Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
           +SG T F+EP   VE NN    L   E AE   IL  L+    K + EI      +  ID
Sbjct: 213 ASGNTLFIEPSAIVELNNQYKDLELKEDAEIRRILDRLSRLAQKFDVEILENQKIIARID 272

Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
              A+A F    D   P L+ Q  ++  S+I      HPLL G                 
Sbjct: 273 FLQAKAKFGLENDYSLPKLNQQKIINIKSAI------HPLLPGK---------------- 310

Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
                                VPID+ +  +   ++ITGPNTGGKT S+KT+GL +LM++
Sbjct: 311 --------------------VVPIDVAIGGDYTTLIITGPNTGGKTVSLKTVGLITLMAQ 350

Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
             L++PA     +  FD +  DIGD QS+E +LSTFS  ++ IVDIL  V+  SLVL+DE
Sbjct: 351 TALFIPADEGSTVNVFDDVFLDIGDKQSIEMSLSTFSASLTNIVDILNRVTSNSLVLLDE 410

Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
           IGSGTDP EG ALA SIL +L ++  +   TTHY++L     ++ R  NA+ EF++ TL 
Sbjct: 411 IGSGTDPIEGAALAISILSHLTEKEVMTFATTHYSELKYYAMENNRVMNASVEFNVNTLS 470

Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 559
           PTY++  G+ G SNA  I+K +G   +I+++A+ L+            +++ + + +++ 
Sbjct: 471 PTYKLEIGTPGKSNAFEISKRLGLSEEILKKAKDLI-----SDDTKNFNKILEQIEDDKY 525

Query: 560 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 619
           ++E++ +   +   EI  +  ++ +++K++D   A +  K  ++  + L+ A  +   ++
Sbjct: 526 QMEAKNKEIEAYRREIQSIKDKLRNKSKEIDEAKAEIIKKAEERANEILDKANKESQAML 585

Query: 620 QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVK 679
           ++ +      + D   SL K       + +E  R +D F  +    +    + G+ + V 
Sbjct: 586 KEAKRSKNANTRDIDRSLNKIRNKFKDSYIE--REEDRFGQTRAKDAPDELKVGDMIIVA 643

Query: 680 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP--NSKRKN 724
            L +K A V+E P     + VQ G +++     N++ I   N   KN
Sbjct: 644 GLNEK-AEVIEGPDSKGNIKVQMGILKMDSNIKNVKKIEGVNQTEKN 689


>gi|217962033|ref|YP_002340603.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           cereus AH187]
 gi|222098016|ref|YP_002532073.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           cereus Q1]
 gi|229141279|ref|ZP_04269817.1| hypothetical protein bcere0013_43720 [Bacillus cereus BDRD-ST26]
 gi|375286547|ref|YP_005106986.1| MutS2 family protein [Bacillus cereus NC7401]
 gi|423355034|ref|ZP_17332659.1| MutS2 protein [Bacillus cereus IS075]
 gi|423570780|ref|ZP_17547025.1| MutS2 protein [Bacillus cereus MSX-A12]
 gi|423603770|ref|ZP_17579663.1| MutS2 protein [Bacillus cereus VD102]
 gi|226723047|sp|B7HRJ3.1|MUTS2_BACC7 RecName: Full=MutS2 protein
 gi|254766387|sp|B9J054.1|MUTS2_BACCQ RecName: Full=MutS2 protein
 gi|217064711|gb|ACJ78961.1| MutS2 family protein [Bacillus cereus AH187]
 gi|221242074|gb|ACM14784.1| DNA mismatch repair protein, MutS family [Bacillus cereus Q1]
 gi|228642060|gb|EEK98353.1| hypothetical protein bcere0013_43720 [Bacillus cereus BDRD-ST26]
 gi|358355074|dbj|BAL20246.1| MutS2 family protein [Bacillus cereus NC7401]
 gi|401085211|gb|EJP93454.1| MutS2 protein [Bacillus cereus IS075]
 gi|401203407|gb|EJR10246.1| MutS2 protein [Bacillus cereus MSX-A12]
 gi|401246534|gb|EJR52881.1| MutS2 protein [Bacillus cereus VD102]
          Length = 786

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 207/718 (28%), Positives = 347/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+L   +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLKQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I++A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|418016394|ref|ZP_12655959.1| DNA mismatch repair protein [Candidatus Arthromitus sp.
           SFB-mouse-NYU]
 gi|345506729|gb|EGX29023.1| DNA mismatch repair protein [Candidatus Arthromitus sp.
           SFB-mouse-NYU]
          Length = 801

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 221/725 (30%), Positives = 349/725 (48%), Gaps = 113/725 (15%)

Query: 12  PFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
           PF  +++E  + LN+TS A+  ++  S P D   ++D+   L     G  +S  EI  + 
Sbjct: 54  PFS-TIDEVIQNLNETSEAIEFIKEFSSP-DFVGLDDVYIYLEKIDKGGSVSIKEIYKIG 111

Query: 70  RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI-DCKLLIIL 128
            TL+ +  V   L++ +    + L  Y        N +    LE+ I   I D +   I 
Sbjct: 112 TTLKCIREVKDYLSKRSL---NYLNYY------YDNISTFKYLEDDIFKAIKDGEE--IS 160

Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
           D AS++L  IR E K    ++   L ++      +  + + + T R  R C+ +K+ +K 
Sbjct: 161 DFASDNLFKIRKELKSKTASIKRKLSEILKT--YSKYLQENVFTVRGDRYCIPVKSEYKS 218

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +  GI  N SSSG+TYF+EP   V  NN    L  +E  E   IL L+  +I  S   I
Sbjct: 219 QIQ-GIIHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSIDNI 277

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
              +  +  ++  F +  ++  +DG+ P ++    +   S+      +HPL+        
Sbjct: 278 YLSIKIIYSLEFIFGKGNYSIEIDGIKPDVNDGEDIYLISA------RHPLIN------- 324

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                     + DV                  VP+++    + + ++ITGPNTGGKT ++
Sbjct: 325 ----------REDV------------------VPLNLDFTKDRKAIIITGPNTGGKTVTL 356

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KTLGL  LM+ +GL++PA    R+ + + I ADIGD QSLEQNLSTFS HI  I+ + + 
Sbjct: 357 KTLGLMHLMAHSGLFIPAYEGSRVMFLNEIFADIGDEQSLEQNLSTFSSHIKNIISMTDN 416

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
           +  ++LVL+DE+GSGTDP EG ALA SI+++  +     + TTHY+ L          EN
Sbjct: 417 IKDKTLVLLDEVGSGTDPEEGAALAISIMEHFINSGCKLMGTTHYSQLKTYAINSDNVEN 476

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF ++TLRPTYR+  G  G SNA  IA S+G ++ II+ AQK               
Sbjct: 477 ASVEFDVKTLRPTYRLNVGIPGKSNAFIIADSLGMNQSIIENAQKY-------------- 522

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDL-DRRAAHLKAKETQQV 604
                L E+  K ES  +T      E +   REIE   +E K L D+    L+  E +++
Sbjct: 523 -----LSEDIIKFESIIKTLEEKTTEAIKNNREIEILREENKILNDKLKKRLENIEKEKL 577

Query: 605 Q----------QELNFAKVQIDTVVQDFENQLRDASADEINSL----IKESESAIAAIVE 650
           +          Q ++ AK +ID V       L+  +A E+N +    +K+ ESA   I  
Sbjct: 578 RIIESAKDEGYQIISNAKGEIDKV-------LKIINALEMNGIDLSSVKDLESARREI-- 628

Query: 651 AHRPDDDFSVSE----TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
             + D    ++E     N+S F  +F  G    +K +G  +  ++E P     VLVQ G 
Sbjct: 629 KKKIDKQNKMNEEKSFKNSSKFNIEFKSGMTAFLKRIGQNV-IILENPDSKGNVLVQAGV 687

Query: 705 MRVRV 709
           +++ V
Sbjct: 688 LKLTV 692


>gi|402555327|ref|YP_006596598.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           cereus FRI-35]
 gi|401796537|gb|AFQ10396.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           cereus FRI-35]
          Length = 786

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 207/718 (28%), Positives = 348/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I++A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++++  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESDMEYINTPKQ 691


>gi|291548598|emb|CBL24860.1| MutS2 family protein [Ruminococcus torques L2-14]
          Length = 791

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 222/725 (30%), Positives = 330/725 (45%), Gaps = 108/725 (14%)

Query: 5   VVQKAQIPFGKS--LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSP 62
           +VQK +I FG +  +EES K L                     +I G L+S         
Sbjct: 57  IVQKGRISFGDAAPVEESMKRL---------------------EIGGSLSS--------- 86

Query: 63  SEICAVRRTLRAVNNVWKKLTEAAELDG-DSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
           +E+  + R L     V        + D  D L  Y  LLE L      T L  +I  CI 
Sbjct: 87  TELLRISRLLVNAARVKAYGRHDTQEDACDCLDEYFNLLEPL------TPLSNEIDRCI- 139

Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKRRSRM 178
               I  D  S+D      + +R++ N++  +      +        +   +IT R  R 
Sbjct: 140 ----IGEDEYSDDASSTLKQIRRSINNINDKVHATLTTLVNGSLRTYLQDAIITMRGDRY 195

Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
           CV +KA ++  +  G+  + SS+G+T F+EP   V+ NN    L   E  E   IL+ L+
Sbjct: 196 CVPVKAEYRGQV-QGLIHDQSSTGSTLFIEPMAIVKLNNDLKELYAKEQEEIQVILANLS 254

Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
            E A+   EI+     + ++D  FAR   A  M    P+L+ +        I I   +HP
Sbjct: 255 EEAAQYIEEIRVDYRSLTDLDFIFARGALAMSMRASRPLLNEEGR------IRIREGRHP 308

Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
           LL               +P K                     VPI + +  +  +++ITG
Sbjct: 309 LL---------------DPKKV--------------------VPITVTLGEDFTLLIITG 333

Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
           PNTGGKT S+KT+GL  LM ++GL++PA +   L  F  I ADIGD QS+EQ+LSTFS H
Sbjct: 334 PNTGGKTVSLKTVGLFCLMGQSGLHIPAGDRSELAVFHQIYADIGDEQSIEQSLSTFSSH 393

Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
           ++ IV  L+ V   SLVL DE+G+GTDP+EG ALA SIL +L  R    + TTHY++L  
Sbjct: 394 MTNIVSFLKKVDERSLVLFDELGAGTDPTEGAALAISILSHLHQRGIRTMATTHYSELKV 453

Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
                   ENA  EF +E+LRPTYR+L G  G SNA  I+  +G    II+ A+K     
Sbjct: 454 YALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPDYIIEDAKK----- 508

Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
           R   Q     +L   L   +R +E +    A L  E  DL  + +   + LD +   +  
Sbjct: 509 RLSEQDVSFEDLLTDLETSKRTIEKEQEEIARLKKEAEDLKAQAKQRQEKLDDQRDRILR 568

Query: 599 KETQQVQQELNFAKVQIDTVVQDF-----ENQLRDASADEINSLIKE-SESAIAAIVEAH 652
           +  ++    L  AK   D  ++DF     EN        E   L K+  ++A A+ ++A 
Sbjct: 569 EANEKANAILREAKEIADKTIKDFRKFGKENISASEMEKEREKLRKKIKDTASASAMKAQ 628

Query: 653 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
           +P       E   S F  + GE V V S+ +   TV  +P     + V+ G +  +V  +
Sbjct: 629 KPK-----KEHKASDF--KLGESVKVLSM-NLTGTVSSLPDAKGNLTVRMGILSSQVNIS 680

Query: 713 NIRPI 717
           ++  I
Sbjct: 681 DLEII 685


>gi|423373498|ref|ZP_17350837.1| MutS2 protein [Bacillus cereus AND1407]
 gi|401096462|gb|EJQ04509.1| MutS2 protein [Bacillus cereus AND1407]
          Length = 786

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 207/718 (28%), Positives = 347/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+L   +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLKQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I++A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|423389147|ref|ZP_17366373.1| MutS2 protein [Bacillus cereus BAG1X1-3]
 gi|401642422|gb|EJS60133.1| MutS2 protein [Bacillus cereus BAG1X1-3]
          Length = 786

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 209/718 (29%), Positives = 347/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  ELQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ   +  I    +T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLVNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|375363272|ref|YP_005131311.1| MutS2 protein [Bacillus amyloliquefaciens subsp. plantarum CAU
           B946]
 gi|371569266|emb|CCF06116.1| MutS2 protein [Bacillus amyloliquefaciens subsp. plantarum CAU
           B946]
          Length = 785

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 186/581 (32%), Positives = 292/581 (50%), Gaps = 65/581 (11%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L + QK L++   A A+M+ +       + DI   L  A  G +L+P+E   +   L AV
Sbjct: 40  LADIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             +   +++  E DG  +    PL++   +    L +LE +I  CID    + LD AS  
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153

Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++   
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT   A+  +EI  
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            ++ +  +D  FA+A +A+ +    P ++       D  I ++  +HPLL          
Sbjct: 269 NVEVLQTLDFIFAKARYAKAIKATKPFMNG------DGFIRLKKARHPLL---------- 312

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                 P    V N                   DI++  +   +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           LGL ++M++AGL++PA        FD + ADIGD QS+EQ+LSTFS H+  IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
            EF +ETL PTY++L G  G SNA  I++ +G    II +A+  +        +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521

Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
              SL + +++ + +     SL  E   L++E++ +  +L+
Sbjct: 522 MIASLEKSKKRADEELSETESLRKEAEKLHKELQQQIIELN 562


>gi|325663164|ref|ZP_08151614.1| hypothetical protein HMPREF0490_02355 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325470618|gb|EGC73848.1| hypothetical protein HMPREF0490_02355 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 646

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 159/453 (35%), Positives = 234/453 (51%), Gaps = 47/453 (10%)

Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
           +IT R  R C+ +KA ++  +  G+  + SS+G+T F+EP   V+ NN    L   E  E
Sbjct: 189 IITMRGDRYCLPVKAEYRSQV-QGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQEE 247

Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
              IL+ L+A+ A    EI+     + E+D  FA+  FA  ++   PI +   +      
Sbjct: 248 IQVILANLSADAAGYVTEIRRNYKLLTELDFIFAKGSFALSLNASKPIFNDHGY------ 301

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
           I+I   +HPLL    +                                   VPI + +  
Sbjct: 302 IHIREGRHPLLDKKKV-----------------------------------VPITVTLGD 326

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
              ++++TGPNTGGKT S+KT+GL +LM +AGL++PA +   L  F  + ADIGD QS+E
Sbjct: 327 AFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELALFHEVYADIGDEQSIE 386

Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
           Q+LSTFS H++ IV  L+ V   SLVL DE+G+GTDP+EG ALATSIL YL +R    + 
Sbjct: 387 QSLSTFSSHMTNIVSFLQHVDEHSLVLFDELGAGTDPTEGAALATSILSYLHERKIRTMA 446

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTHY++L          ENA  EF +ETLRPTY +L G  G SNA  I+  +G    II 
Sbjct: 447 TTHYSELKVYALSTPGVENACCEFDVETLRPTYHLLIGIPGKSNAFAISSKLGLPDYIIA 506

Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
            A+   ERL    Q     +L   L   RR +E + +  A+   E+  L +++E + + L
Sbjct: 507 DAK---ERL--SEQDESFEDLLADLENSRRTIEKEQQEIAAYKREVEALKQKLEQKQERL 561

Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
           D R   +  +  ++    L  AK   D  +++F
Sbjct: 562 DERKERIINEANEKANAILREAKEVADETMKNF 594


>gi|42783724|ref|NP_980971.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           cereus ATCC 10987]
 gi|81699646|sp|Q72ZJ0.1|MUTS2_BACC1 RecName: Full=MutS2 protein
 gi|42739654|gb|AAS43579.1| MutS2 family protein [Bacillus cereus ATCC 10987]
          Length = 786

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 207/718 (28%), Positives = 348/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVDL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I++A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++++  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESDMEYINTPKQ 691


>gi|375088406|ref|ZP_09734746.1| MutS2 family protein [Dolosigranulum pigrum ATCC 51524]
 gi|374562444|gb|EHR33774.1| MutS2 family protein [Dolosigranulum pigrum ATCC 51524]
          Length = 790

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 213/731 (29%), Positives = 357/731 (48%), Gaps = 90/731 (12%)

Query: 21  QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVN 76
           QK  ++T  A  +++ +  L ++  EDI   L     G +LS  EI  + R +   R + 
Sbjct: 47  QKWQDETEDAAKLLRMKGGLPIAAFEDIKPHLKRLTIGGVLSEGEIVDIARVIKNSRELK 106

Query: 77  NVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
             + +L E A EL          L +L      L  LE KI   ID +   + D AS  L
Sbjct: 107 QFFSQLKEEAIEL--------KQLYQLNDALYSLQSLERKIREVID-ESGTVSDDASPKL 157

Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
             IR   K+  +++   L ++  +  Q+  +   +IT R +R  + +KA  + +   G+ 
Sbjct: 158 RGIRTGIKQMEQSVRDKLDRIV-RGKQSRYLTDSIITIRNNRYVIPVKADSRAVF-GGVV 215

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
            + SS+G T F+EP+  +  NN   +  + E AE   IL+ L+  IA    EI+  + R+
Sbjct: 216 HDQSSTGQTLFIEPQSVLNLNNKLKQYRSEEQAEIDRILAELSELIAPHTNEIEANLRRL 275

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
           ++ D   A+A +A+ +D   P       +S + S+++ G +HPL+               
Sbjct: 276 VQFDFIQAKATYAKQLDASRP------EISENLSVSLIGARHPLIK-------------- 315

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                +D  V  DI +  + + +V+TGPNTGGKT  +KTLGL  
Sbjct: 316 ---------------------ADEVVANDIIIGEDYKAIVVTGPNTGGKTVILKTLGLMQ 354

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM +AGL++PA+    +  F    ADIGD QS+EQ+LSTFS H++ IV IL  +  +SL+
Sbjct: 355 LMGQAGLHIPAEQGSVIGLFTKWFADIGDEQSIEQSLSTFSSHMTNIVSILNQLDEKSLI 414

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L+DE+G+GTDP EG ALA ++L Y+  +    ++T+HY +L        +  NA+ EF +
Sbjct: 415 LLDELGAGTDPQEGAALAIAMLDYIASQGSTVMITSHYPELKVYGYNRPQTINASMEFDV 474

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERLRPERQQHRKS 548
           ++L PTYR+L G  G SNA  IA+ +G    II  +Q+L       V+ +  + +Q RK 
Sbjct: 475 DSLSPTYRLLLGVPGRSNAFEIARRLGLSEHIIASSQQLMSGESQSVDNMIGDLEQKRKE 534

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
              Q+     ++L+ +   A  LH E+ D Y   E     L+++A     +E  ++ QE 
Sbjct: 535 AEKQN-----KQLKQELYQATQLHNELKDFYASYEKHKDHLEQKA----QEEANEIIQE- 584

Query: 609 NFAKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPDDDF---SVSE 662
             A+ + D ++++  + QL    A      +KE E   A + +   H   +      V +
Sbjct: 585 --AQKEADRIIEELRHRQLEGEQAPN----VKEHEFIDAKSRLSNLHYEQEHLKQNKVLQ 638

Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
                     G++VHV S  D+   +VE   D+   +VQ G +++++ ++ ++ +  +K 
Sbjct: 639 KEKQKKELAAGDEVHVLSF-DQPGILVE-QTDEKEWVVQMGMLKMKIDESELK-VKETKE 695

Query: 723 KNAANPAPRLR 733
           K A  P   +R
Sbjct: 696 K-AKQPKTTVR 705


>gi|49478686|ref|YP_038600.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|81696639|sp|Q6HCX6.1|MUTS2_BACHK RecName: Full=MutS2 protein
 gi|49330242|gb|AAT60888.1| DNA mismatch repair protein, MutS family [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 786

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 207/718 (28%), Positives = 347/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   +Q      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNSQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|313887962|ref|ZP_07821641.1| recombination and DNA strand exchange inhibitor protein
           [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846128|gb|EFR33510.1| recombination and DNA strand exchange inhibitor protein
           [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 791

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 209/739 (28%), Positives = 359/739 (48%), Gaps = 70/739 (9%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           Q+      E  +  LN+T+ AL ++  + +P  L  I DI  I+     G  L+   +  
Sbjct: 36  QVEISTQYEVVKNRLNETNEALKLIIAKGEP-QLFGIVDIRSIIKRTEIGGALTAGGLLQ 94

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           V   LR V+   K   +    + D   +   + +L+++      LE++I   I  +  I 
Sbjct: 95  VSDFLR-VSRGLKTYLKKDSYNSDEEVKLEYIDKLIEDLYTDKRLEDEINSKIISEEEIA 153

Query: 128 LDRASEDLELIRA--ERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
            D + E L + R    +K +++N L+ +L         A  +   ++T R  R  V +K 
Sbjct: 154 DDASRELLRIRRGIVAKKDSIKNKLNGILSS------HADFLQDAIVTLRDGRYVVPVKI 207

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            +K  +  G+  ++S SG T ++EP   VE NN    L   E  E   IL  L+  + ++
Sbjct: 208 ENKSRVK-GLVHDISGSGQTAYIEPMAVVEANNDLKELYIKENLEIEKILKELSELVGET 266

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
             EIK   ++++E+D  FA+A          P L+ +        IN+    HP L    
Sbjct: 267 SEEIKSNQEKLIELDFIFAKARLGLNYRANMPKLNREGR------INLIKAYHPFL---- 316

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                                        + I+   VPIDI +  +   +++TGPNTGGK
Sbjct: 317 ----------------------------DRKIA---VPIDINLGIDFTSLIVTGPNTGGK 345

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T S+KT+GL +LM++ GL +PA     +  F+ + ADIGD QS+EQ+LSTFS H+  IV 
Sbjct: 346 TVSIKTVGLLTLMTQFGLLIPADEASEIAVFEKVFADIGDEQSIEQSLSTFSSHMVNIVY 405

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           IL+ V+  SLVL DE+G+GTDP+EG ALA SI+ ++ +R    + T+HY  L        
Sbjct: 406 ILKNVTPNSLVLFDELGAGTDPTEGAALARSIMDFMLERKIRCISTSHYNQLKIYALTTD 465

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
              NA+ EF +++L PTYR+L G  G SNA  I++ +G   +II  A+KL+     E + 
Sbjct: 466 GVANASMEFDVDSLSPTYRLLIGVPGKSNAFEISRRLGLPDEIIGEAKKLLSSENIEFE- 524

Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 604
               ++ QS+ E+R K+           A++    + ++ + K L+ +   +  K  ++ 
Sbjct: 525 ----DVLQSIDEDRTKIREYREELEREKADLEKENKRLQSKIKKLEDQKEKILEKSREEA 580

Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
           ++ L   K  +D ++ +  N+ RD  + E +  I+E++  +   ++  R   +  +++  
Sbjct: 581 KRLLLNTKENVDIILSEI-NEARDKISSENSKKIQEAQDLLRESIKNARDKSELEITKAA 639

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI------- 717
                 + G++V   SLG+ LATV+E+P     VLVQ G M++ + K+++  I       
Sbjct: 640 NPIREIKVGDKVRT-SLGN-LATVLELPDKKGNVLVQSGIMKMNMPKDSLTRIDVQEDTT 697

Query: 718 PNSKRKNAANPAPRLRKQV 736
            N+ R+   N A  ++ ++
Sbjct: 698 KNNTRRILKNKATNVKSEI 716


>gi|229158157|ref|ZP_04286225.1| hypothetical protein bcere0010_43350 [Bacillus cereus ATCC 4342]
 gi|228625319|gb|EEK82078.1| hypothetical protein bcere0010_43350 [Bacillus cereus ATCC 4342]
          Length = 786

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 211/720 (29%), Positives = 350/720 (48%), Gaps = 89/720 (12%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+L   +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
           L E ++  E     A +L  +   L+RE++ +  +   DR    LKA+  ++ ++++  A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAA 583

Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
           K + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633

Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           +  P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|89098890|ref|ZP_01171770.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. NRRL B-14911]
 gi|89086294|gb|EAR65415.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. NRRL B-14911]
          Length = 784

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 219/729 (30%), Positives = 350/729 (48%), Gaps = 102/729 (13%)

Query: 18  EESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           EE  +L  +T  A+ +++ +  + L  I DI   +  +V G +LSP E+  +  T+ A  
Sbjct: 41  EEVVRLQEETDEAVKVLRIKGNIPLGGIFDIRPHVKRSVIGGMLSPQELVQIASTVHASR 100

Query: 77  NVWKKL----TEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
            + + +     E +EL         P+L E +     L ELEE I   ID    + LD A
Sbjct: 101 QLKRFVDDFSNEESEL---------PILTEYMDRVIVLAELEEAIRMAIDENGEM-LDSA 150

Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
           S+ L  IR + +    R  E L+S+++   A    A  +   +IT R  R  + +K  ++
Sbjct: 151 SDALRSIRTQLRTRESRVRERLESMIRSSNA----AKMLSDAIITIRNDRFVIPVKQEYR 206

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
                GI  + SSSG T F+EP+  V+ NN    +   E  E   IL  L+   A  + E
Sbjct: 207 GHY-GGIIHDQSSSGQTLFIEPQAIVQLNNELQSIRVKEQQEIERILVELSGRAAAYQPE 265

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           +  +++ + E+D  FA+  +++ +    P       V+ +  IN+   +HPLL       
Sbjct: 266 LDMIVEVLAEVDFMFAKGRYSRRLKASKP------EVNNERRINLFKARHPLL------Q 313

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
           +  A +N                             DI +  +   +VITGPNTGGKT +
Sbjct: 314 IDEAVAN-----------------------------DISLGRDYTTIVITGPNTGGKTVT 344

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL +LM++AGL +PA +   +  F  + ADIGD QS+EQ+LSTFS H+  IVDIL 
Sbjct: 345 LKTVGLCTLMAQAGLQIPALDGSEVSVFGAVYADIGDEQSIEQSLSTFSSHMVNIVDILA 404

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
               ESLVL DE+G+GTDP EG ALA SIL  +  R    + TTHY +L           
Sbjct: 405 KADFESLVLFDELGAGTDPQEGAALAISILDEVYKRGSRVIATTHYPELKAYGYNREGVI 464

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NA+ EF +ETL PTY++L G  G SNA  I++ +G D  +I+ A+  V          + 
Sbjct: 465 NASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLDNSVIESARSHV-----SEDSSQI 519

Query: 548 SELYQSLMEERRKLESQ-------ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
             +  SL + RR+ E +        R A  LH ++     E  ++  ++  +AA   A  
Sbjct: 520 ENMIASLEDSRRQAEKELEEAHELLRGADMLHKDMQKQMMEYYEQKDEMQEKAAAKAADI 579

Query: 601 TQQVQQEL-----NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPD 655
            ++ + E      +  K++I+   +  E++L DA     ++  K S+S      EA + D
Sbjct: 580 VEKAKAEAEEIIRDLRKMRIEKHAEVKEHELIDARKKLEDAAPKVSKSK----KEARKSD 635

Query: 656 D-DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
             DF+             G++V V + G K   ++E   +D+   VQ G ++++VK+ ++
Sbjct: 636 KHDFAA------------GDEVKVLTFGQK-GHLLERASEDEW-QVQIGILKMKVKERDL 681

Query: 715 RPIPNSKRK 723
             I + K K
Sbjct: 682 EFIKSPKPK 690


>gi|345017977|ref|YP_004820330.1| MutS2 protein [Thermoanaerobacter wiegelii Rt8.B1]
 gi|344033320|gb|AEM79046.1| MutS2 protein [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 791

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 183/572 (31%), Positives = 295/572 (51%), Gaps = 60/572 (10%)

Query: 7   QKA-QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
           QKA  I   K +EE ++ L+  + A++ + S        EDI   +  A    +L   E+
Sbjct: 33  QKASNIVIKKDIEEIERELDLLNEAISFISSYGGISFAFEDIRDYIKKAQIDSVLYNQEL 92

Query: 66  CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
             +++ L  V+ +        E D     R+  L E  K    + +LE++I   I  +  
Sbjct: 93  LKIKKFLNLVSQIKGYFKNLQESD-----RFVRLKEYDKKVLPIKDLEKRIENIIISEDE 147

Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
           I  D AS  L+ +R ++    E + + L  + +   +   + +P+IT R+ R  V +K  
Sbjct: 148 I-ADDASPMLKSLRRQKSSINEKIRATLNSIIST--RQKELQEPIITVRQGRYVVPVKQE 204

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           ++     GI  + SSSGAT F+EP   V+ NN   ++   E  E   IL  L+ E+ K  
Sbjct: 205 YRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELKERQEIQRILLELSQEVKKYS 263

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
           + +   ++ V ++D  FA+A ++  +  V P L++  +      IN++  +HPL+     
Sbjct: 264 QILFDDIEIVSDLDFIFAKAKYSLKLKAVRPELNTMGY------INLKKARHPLI----- 312

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                             N E+ V            PIDI +  +   +VITGPNTGGKT
Sbjct: 313 ------------------NQEVIV------------PIDIYIGDQFNTLVITGPNTGGKT 342

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KT+GL +LM+ AGL +PA+   ++  F+ +  DIGD QS+EQ+LSTFS H++ IV I
Sbjct: 343 VTLKTVGLLTLMAMAGLNIPAEERSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVSI 402

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           L+ V++  LVL+DE+G+GTDP EG ALA SIL  L       + TTHY++L     K   
Sbjct: 403 LQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGAKTIATTHYSELKQYALKAPG 462

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQ 543
            ENA+ EF +ETL+PTY+++ G  G SNA  I+K +G  ++II+ A+K +  E L+ E  
Sbjct: 463 VENASVEFDVETLKPTYKLIIGLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE-- 520

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEI 575
                ++   +  +RR+LE   +  A L  ++
Sbjct: 521 -----DIIADVESKRRELEKANQEIAFLKKDV 547


>gi|297529147|ref|YP_003670422.1| MutS2 family protein [Geobacillus sp. C56-T3]
 gi|297252399|gb|ADI25845.1| MutS2 family protein [Geobacillus sp. C56-T3]
          Length = 792

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 185/528 (35%), Positives = 275/528 (52%), Gaps = 64/528 (12%)

Query: 17  LEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
           LEE    L++T  A A+++     PLD +   DI   L  A  G  LSP E+  V  T  
Sbjct: 48  LEEVAAWLDETDEAAAVLRLAGYAPLDGAV--DIRPHLKRAAIGGTLSPQELLEVAATSA 105

Query: 74  AVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           A   + + + +  E  G  D L  Y+   EL++    +  LE  I   ID    + LD A
Sbjct: 106 ASRQMKRLIMDLHEEHGGLDRLSTYAD--ELVE----VPALEHDIRRSIDDHGEV-LDAA 158

Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
           S+ L  +R + +    R  E L+++++  +AQ      +   +IT R  R  + +K  ++
Sbjct: 159 SDRLRSLRGQIRSVEARIREKLENIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYR 214

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
                GI  + S+SGAT F+EP+  VE NN        E  E   IL  L+A++A+    
Sbjct: 215 GAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEP 273

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           +   ++ +  +D AFA+A +A+ +    P ++S+ ++ F  +      +HPLL       
Sbjct: 274 LARAVEALAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL------- 320

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                        D E +               VP DI++  +   +VITGPNTGGKT +
Sbjct: 321 -------------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVT 352

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL +LM++AGL++PA +      F  + ADIGD QS+EQ+LSTFS H+  IVDIL 
Sbjct: 353 LKTIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILR 412

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
            V  ESLVL DE+G+GTDP EG ALA +IL  +  R    V TTHY++L           
Sbjct: 413 HVDGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYSELKAYGYNRPGVV 472

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           NA+ EF  ETLRPTY++L G  G SNA +I++ +G D +II+RA+  V
Sbjct: 473 NASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV 520


>gi|229019772|ref|ZP_04176575.1| hypothetical protein bcere0030_42720 [Bacillus cereus AH1273]
 gi|229025999|ref|ZP_04182383.1| hypothetical protein bcere0029_42850 [Bacillus cereus AH1272]
 gi|228735280|gb|EEL85891.1| hypothetical protein bcere0029_42850 [Bacillus cereus AH1272]
 gi|228741497|gb|EEL91694.1| hypothetical protein bcere0030_42720 [Bacillus cereus AH1273]
          Length = 786

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 211/724 (29%), Positives = 351/724 (48%), Gaps = 86/724 (11%)

Query: 13  FGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           FG+ +E  Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+
Sbjct: 40  FGEIVE-LQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTM 96

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRA 131
               N+ K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D A
Sbjct: 97  YGSRNM-KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSA 150

Query: 132 SEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
           S+ L  IR +      R  E L+++ +   AQ   +  I    +T R  R  + +K  ++
Sbjct: 151 SDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYR 206

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
            +   GI  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     
Sbjct: 207 GVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADI 265

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           +   ++ V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+       
Sbjct: 266 VLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------- 312

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                   +P                    +  VP +I +  +   +VITGPNTGGKT +
Sbjct: 313 --------DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVT 344

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+G+  LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE
Sbjct: 345 LKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILE 404

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
               ESLVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  
Sbjct: 405 KADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVI 464

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NA+ EF + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++ 
Sbjct: 465 NASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKI 519

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
             +   L E ++  E     A +L  +   L+RE++ +  + +        K  ++ +++
Sbjct: 520 ENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKVQKEGEEK 579

Query: 608 LNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSE 662
           +  AK + + ++Q+   QLR A    +  + LI+     E A   +V+  +         
Sbjct: 580 VEAAKKEAEGIIQEL-RQLRKAQLVNVKDHELIEAKSRLEGAAPELVKKQK--------- 629

Query: 663 TNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
            N  +  P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I 
Sbjct: 630 VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYIN 687

Query: 719 NSKR 722
             K+
Sbjct: 688 TPKQ 691


>gi|423615062|ref|ZP_17590896.1| MutS2 protein [Bacillus cereus VD115]
 gi|401261918|gb|EJR68069.1| MutS2 protein [Bacillus cereus VD115]
          Length = 786

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 208/718 (28%), Positives = 346/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I D+   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  ELQDTTDEAAKVIRLKGSAPL--GGITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ   +  I    +T R  R  + +K  ++ +   G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        R  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNRERVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDEKLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++ +   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIHEL-RQLRKAQLVNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|423452167|ref|ZP_17429020.1| MutS2 protein [Bacillus cereus BAG5X1-1]
 gi|401142238|gb|EJQ49787.1| MutS2 protein [Bacillus cereus BAG5X1-1]
          Length = 786

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 212/699 (30%), Positives = 345/699 (49%), Gaps = 89/699 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  L    P+L
Sbjct: 65  LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
           NN   E R+   +  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +  
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291

Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
             PI++++ ++    +      +HPL+               +P                
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314

Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
               +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   + 
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370

Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
            F  I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430

Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
            SIL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490

Query: 514 ALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
           A  I+K +G   ++I RA+  +  +  + E    +  E  ++   ER++ E   + +  L
Sbjct: 491 AFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEYRKQSEKL 550

Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
           H E+     E  DE     R    LKA+  ++ ++++  AK + + ++ +   QLR A  
Sbjct: 551 HRELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQL 602

Query: 632 DEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS---SFTPQFGEQVHVKSLGD 683
             +  + LI+     E A   +V+  +      V+  NT+      P  G++V V + G 
Sbjct: 603 VNVKDHELIEAKSRLEGAAPELVKKQK------VNVKNTAPKQQLRP--GDEVKVLTFGQ 654

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 655 KGQLLKKV--SDTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|423470753|ref|ZP_17447497.1| MutS2 protein [Bacillus cereus BAG6O-2]
 gi|402434491|gb|EJV66529.1| MutS2 protein [Bacillus cereus BAG6O-2]
          Length = 786

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 212/699 (30%), Positives = 345/699 (49%), Gaps = 89/699 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  L    P+L
Sbjct: 65  LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
           NN   E R+   +  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +  
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291

Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
             PI++++ ++    +      +HPL+               +P                
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314

Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
               +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   + 
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370

Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
            F  I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430

Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
            SIL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490

Query: 514 ALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
           A  I+K +G   ++I RA+  +  +  + E    +  E  ++   ER++ E   + +  L
Sbjct: 491 AFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEYRKQSEKL 550

Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
           H E+     E  DE     R    LKA+  ++ ++++  AK + + ++ +   QLR A  
Sbjct: 551 HRELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQL 602

Query: 632 DEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS---SFTPQFGEQVHVKSLGD 683
             +  + LI+     E A   +V+  +      V+  NT+      P  G++V V + G 
Sbjct: 603 VNVKDHELIEAKSRLEGAAPELVKKQK------VNVKNTAPKQQLRP--GDEVKVLTFGQ 654

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 655 KGQLLKKV--SDTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|228910376|ref|ZP_04074191.1| hypothetical protein bthur0013_45230 [Bacillus thuringiensis IBL
           200]
 gi|228849142|gb|EEM93981.1| hypothetical protein bthur0013_45230 [Bacillus thuringiensis IBL
           200]
          Length = 786

 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 209/714 (29%), Positives = 349/714 (48%), Gaps = 77/714 (10%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ- 671
           + + ++Q+   QLR A    +N  +K+ E   A + +E   P+      + N  +  P+ 
Sbjct: 586 EAEGIIQEL-RQLRKAQL--VN--VKDHELIEAKSRLEGTAPEL-VKKQKVNVKNTAPKQ 639

Query: 672 ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
               G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 640 QLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|75762595|ref|ZP_00742445.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218899706|ref|YP_002448117.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           cereus G9842]
 gi|228903069|ref|ZP_04067206.1| hypothetical protein bthur0014_42360 [Bacillus thuringiensis IBL
           4222]
 gi|423358361|ref|ZP_17335864.1| MutS2 protein [Bacillus cereus VD022]
 gi|423560939|ref|ZP_17537215.1| MutS2 protein [Bacillus cereus MSX-A1]
 gi|434377706|ref|YP_006612350.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           thuringiensis HD-789]
 gi|226723045|sp|B7IJV1.1|MUTS2_BACC2 RecName: Full=MutS2 protein
 gi|74489915|gb|EAO53281.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218542145|gb|ACK94539.1| MutS2 family protein [Bacillus cereus G9842]
 gi|228856555|gb|EEN01078.1| hypothetical protein bthur0014_42360 [Bacillus thuringiensis IBL
           4222]
 gi|401086048|gb|EJP94280.1| MutS2 protein [Bacillus cereus VD022]
 gi|401202784|gb|EJR09634.1| MutS2 protein [Bacillus cereus MSX-A1]
 gi|401876263|gb|AFQ28430.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           thuringiensis HD-789]
          Length = 786

 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 209/714 (29%), Positives = 349/714 (48%), Gaps = 77/714 (10%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ- 671
           + + ++Q+   QLR A    +N  +K+ E   A + +E   P+      + N  +  P+ 
Sbjct: 586 EAEGIIQEL-RQLRKAQL--VN--VKDHELIEAKSRLEGTAPEL-VKKQKVNVKNTAPKQ 639

Query: 672 ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
               G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 640 QLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|30264620|ref|NP_846997.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           anthracis str. Ames]
 gi|47530091|ref|YP_021440.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49187442|ref|YP_030694.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           anthracis str. Sterne]
 gi|65321918|ref|ZP_00394877.1| COG1193: Mismatch repair ATPase (MutS family) [Bacillus anthracis
           str. A2012]
 gi|165871464|ref|ZP_02216111.1| MutS2 family protein [Bacillus anthracis str. A0488]
 gi|167635560|ref|ZP_02393872.1| MutS2 family protein [Bacillus anthracis str. A0442]
 gi|167641563|ref|ZP_02399810.1| MutS2 family protein [Bacillus anthracis str. A0193]
 gi|170688257|ref|ZP_02879467.1| MutS2 family protein [Bacillus anthracis str. A0465]
 gi|170708684|ref|ZP_02899122.1| MutS2 family protein [Bacillus anthracis str. A0389]
 gi|177653140|ref|ZP_02935427.1| MutS2 family protein [Bacillus anthracis str. A0174]
 gi|190566985|ref|ZP_03019901.1| MutS2 family protein [Bacillus anthracis str. Tsiankovskii-I]
 gi|227817334|ref|YP_002817343.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           anthracis str. CDC 684]
 gi|229603197|ref|YP_002868830.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           anthracis str. A0248]
 gi|254686957|ref|ZP_05150815.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254736658|ref|ZP_05194364.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254741696|ref|ZP_05199383.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           anthracis str. Kruger B]
 gi|254754707|ref|ZP_05206742.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           anthracis str. Vollum]
 gi|254757539|ref|ZP_05209566.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           anthracis str. Australia 94]
 gi|386738447|ref|YP_006211628.1| MutS2 family protein [Bacillus anthracis str. H9401]
 gi|421639161|ref|ZP_16079754.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           anthracis str. BF1]
 gi|81714920|sp|Q81L40.1|MUTS2_BACAN RecName: Full=MutS2 protein
 gi|254766187|sp|C3PAE0.1|MUTS2_BACAA RecName: Full=MutS2 protein
 gi|254766188|sp|C3L808.1|MUTS2_BACAC RecName: Full=MutS2 protein
 gi|30259278|gb|AAP28483.1| MutS2 family protein [Bacillus anthracis str. Ames]
 gi|47505239|gb|AAT33915.1| MutS2 family protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181369|gb|AAT56745.1| MutS2 family protein [Bacillus anthracis str. Sterne]
 gi|164712761|gb|EDR18291.1| MutS2 family protein [Bacillus anthracis str. A0488]
 gi|167510448|gb|EDR85847.1| MutS2 family protein [Bacillus anthracis str. A0193]
 gi|167528980|gb|EDR91735.1| MutS2 family protein [Bacillus anthracis str. A0442]
 gi|170126364|gb|EDS95253.1| MutS2 family protein [Bacillus anthracis str. A0389]
 gi|170667763|gb|EDT18516.1| MutS2 family protein [Bacillus anthracis str. A0465]
 gi|172081664|gb|EDT66735.1| MutS2 family protein [Bacillus anthracis str. A0174]
 gi|190561976|gb|EDV15945.1| MutS2 family protein [Bacillus anthracis str. Tsiankovskii-I]
 gi|227002648|gb|ACP12391.1| MutS2 family protein [Bacillus anthracis str. CDC 684]
 gi|229267605|gb|ACQ49242.1| MutS2 family protein [Bacillus anthracis str. A0248]
 gi|384388299|gb|AFH85960.1| MutS2 family protein [Bacillus anthracis str. H9401]
 gi|403393580|gb|EJY90823.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           anthracis str. BF1]
          Length = 786

 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 207/718 (28%), Positives = 347/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PT+++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTHKLLIGVPGRSNAFEISKRLGLSNRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|413933876|gb|AFW68427.1| hypothetical protein ZEAMMB73_052095 [Zea mays]
          Length = 864

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 187/565 (33%), Positives = 292/565 (51%), Gaps = 54/565 (9%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
           S E+SQ LL +T AA+ ++ +    +D S ++ I   ++S   G ++   E  AV   + 
Sbjct: 85  SYEQSQMLLQETEAAVLLLDNAGGAMDFSGLDTIESAIHSVSGGAVIKGLEAMAVTSLMM 144

Query: 74  AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
            V ++   +  A +LD  S  R + L E + +      L + I   +D     + D AS 
Sbjct: 145 FVESLQVNIKAAMKLDEGSCSRLTTLTETILDAVINKSLVKSIQDIVDDDG-SVKDTASP 203

Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           +L   R + +R    L  L+ K+         + +  I     R C+     +     DG
Sbjct: 204 ELRRYREQVQRLENRLYQLMDKLMRNADDEASLSEVCIVN--GRCCIRTTMDNSSFF-DG 260

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKYLM 252
           + L+ S S A   +EP  AV  N+ E++ S + +A+ E  +LS LT +I      I+ L+
Sbjct: 261 LLLS-SRSDAGSMIEPIVAVPLND-ELQESRALVAKAELDVLSKLTDKIRLDLDSIQNLL 318

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILS----SQSHVSFDSSINIEGIK------------ 296
              +++D   ARA ++   DG  P L         V+  +  +I+ I             
Sbjct: 319 QETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSATGGSIKQISSAQLPKKAWKLY 378

Query: 297 -----HPLLL-------GSSLRSLSAASSN-------------SNPLKSDVENSEMTVGS 331
                HPLLL         + R +++A++               + L SD+++ ++ V  
Sbjct: 379 MPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQDIAEEDQLASDLDSMKLRVSQ 438

Query: 332 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 391
           L K   D PVP+D  +  ET V+VITGPNTGGKT S+KT+GLASLM+K GLY+ A    +
Sbjct: 439 LEK---DQPVPVDFMIAEETTVLVITGPNTGGKTISLKTVGLASLMAKIGLYILASEPVK 495

Query: 392 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVA 451
           +PWF+ + ADIGD QSL Q+LSTFSGH+ +I  I    + ESLVL+DE+G+GT+P EG A
Sbjct: 496 IPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAESTSESLVLLDEVGAGTNPLEGAA 555

Query: 452 LATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
           L  S+L+   +    L + TTH+ +L  LK  +  FENA  EF  E L+PT++ILWG  G
Sbjct: 556 LGMSLLESFAEAGSFLTLATTHHGELKTLKYSNNSFENACMEFDEENLKPTFKILWGIPG 615

Query: 511 DSNALNIAKSIGFDRKIIQRAQKLV 535
            SNA+NI + +G    I++ +++L+
Sbjct: 616 RSNAINITERLGLPLDIVESSRRLL 640


>gi|229175259|ref|ZP_04302774.1| hypothetical protein bcere0006_43390 [Bacillus cereus MM3]
 gi|228608091|gb|EEK65398.1| hypothetical protein bcere0006_43390 [Bacillus cereus MM3]
          Length = 786

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 208/718 (28%), Positives = 347/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIISLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ   +  I    +T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREKVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVINQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++++   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIREL-RQLRKAQLINVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|257870172|ref|ZP_05649825.1| DNA mismatch repair protein MutS [Enterococcus gallinarum EG2]
 gi|257804336|gb|EEV33158.1| DNA mismatch repair protein MutS [Enterococcus gallinarum EG2]
          Length = 787

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 211/693 (30%), Positives = 338/693 (48%), Gaps = 95/693 (13%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           IE+I   +     G  L+  E+  V R L   N + +   + +    DS   +  L E  
Sbjct: 68  IENIRPQMKRIEIGADLNGLELAQVGRVLVTANELKRFFEDLS----DSEIEFERLYEWE 123

Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQ 159
           K    L  L  ++   +D    +  D AS +L +IR   +R+     E LDSL++   A+
Sbjct: 124 KQLVTLPTLSRRLKEAVDEDGRLT-DEASPELRVIRQNIRRSERTIRETLDSLVRGGNAK 182

Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
                 +   ++T R  R  + +K  ++ +   G+  + SSSG T F+EPK  V+ NN  
Sbjct: 183 Y-----LSDTIVTMRNERYVIPVKQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVDQNN-- 234

Query: 220 VRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
            RL   +IAE T I   L+ L+AE+A  +REI +    +  +D   A+A F + +  + P
Sbjct: 235 -RLRQHQIAERTEIERILAELSAELAPYQREILHNAYVIGMMDFMNAKARFGKELQAIVP 293

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
            +++ +HV F  +      +HPL+                    D E             
Sbjct: 294 AINTDNHVVFKQA------RHPLI--------------------DQEKV----------- 316

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
               VP DI +  + + VVITGPNTGGKT ++KTLGL  +M ++GL +      ++  F 
Sbjct: 317 ----VPNDIAIGEDYQAVVITGPNTGGKTITLKTLGLLQIMGQSGLPILVDEESQMGIFQ 372

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            I ADIGD QS+EQ+LSTFS H++ IVD+L+ V   SLVL DE+G+GTDP EG ALA +I
Sbjct: 373 EIFADIGDEQSIEQSLSTFSSHMTTIVDVLKKVDHTSLVLFDELGAGTDPQEGAALAIAI 432

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L  L  R    + TTHY +L           NA+ EF ++TL PTYR+L G  G SNA  
Sbjct: 433 LDELGARSAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFE 492

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I+K +G D +II++A+++++               Q L E    LE++ +   + + E+ 
Sbjct: 493 ISKRLGLDTQIIEQAKQIMDGES------------QDLNEMIADLENRRKMTETEYLEMR 540

Query: 577 DLYREIEDEAKDL--------DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLR 627
               E E   K+L        + R A L AK  ++  Q +  AK + + ++ D  N QL 
Sbjct: 541 HYVEEAERLQKELKQAYNFFFEEREAEL-AKARKKANQIVEEAKEESEKIISDIRNMQLS 599

Query: 628 DASADEINSLIKESE--SAIAAIVEAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGD 683
                   S +KE E  +A   + + H+ +      V +   ++ T + G++V V S G 
Sbjct: 600 SG-----QSHVKEHELIAARTKLSDLHQEEHLQKNKVLQKAKAAKTLKVGDEVLVTSYGQ 654

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
           +  T+++  G      VQ G +++ + +++++P
Sbjct: 655 R-GTLIKKMGQSQW-QVQLGILKMTLPESDLQP 685


>gi|210613370|ref|ZP_03289690.1| hypothetical protein CLONEX_01897 [Clostridium nexile DSM 1787]
 gi|210151212|gb|EEA82220.1| hypothetical protein CLONEX_01897 [Clostridium nexile DSM 1787]
          Length = 791

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 180/562 (32%), Positives = 278/562 (49%), Gaps = 75/562 (13%)

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           P+IT R  R C+ +KA ++  +  G+  + SS+G+T F+EP   V+ NN    L   E  
Sbjct: 186 PIITMRGDRYCLPVKAEYRSQVS-GMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQE 244

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ L+ + A+   E++     + E+D  FA+   A  M+   PI ++      D 
Sbjct: 245 EIQIILARLSVDAAEYIEELRSNYTILGELDFIFAKGALALSMNASRPIFNT------DG 298

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
            I+I   +HPLL    +                                   VPI I + 
Sbjct: 299 YIHIREGRHPLLDKKKV-----------------------------------VPITIMLG 323

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
            E  ++++TGPNTGGKT S+KT+GL +LM +AGL++PA +  +L  F+ + ADIGD QS+
Sbjct: 324 KEFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSKLSVFENVYADIGDEQSI 383

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQ+LSTFS H++ IV  L+ V   SLVL DE+G+GTDP+EG ALA +IL YL +R    +
Sbjct: 384 EQSLSTFSSHMTNIVSFLQDVDDRSLVLFDELGAGTDPTEGAALAIAILSYLHERGIRTM 443

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L          ENA  EF +ETLRPTY +L G  G SNA  I+  +G    II
Sbjct: 444 ATTHYSELKVFALSTKGVENACCEFDVETLRPTYHLLIGIPGKSNAFAISSKLGLPDYII 503

Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
           + A+  +           + E ++ L+ +   LE+  RT     AEI    REIE     
Sbjct: 504 ESAKSHLS---------EQDESFEDLLAD---LETSRRTIEKEQAEIASYKREIEKLKHS 551

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
           LD +   L    T+Q ++ +  A  + + ++++   ++ D +  +     KE+ SA    
Sbjct: 552 LDAKQEKL----TEQKERIIKEANEKANAILRE-AKEVADETMKQFRKFGKENISAADME 606

Query: 649 VEAHRPDDDFSVSETN-------------TSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
            E  R     + +++               S F  + GE V V S+ +   TV  +P   
Sbjct: 607 RERERLRKKMAKTQSGMTLEKKKPKKQHKPSDF--RLGESVKVLSM-NLTGTVSSLPDAK 663

Query: 696 DTVLVQYGKMRVRVKKNNIRPI 717
             + VQ G +R +V  +++  I
Sbjct: 664 GNLFVQMGILRSQVNISDLEII 685


>gi|160937675|ref|ZP_02085035.1| hypothetical protein CLOBOL_02565 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439320|gb|EDP17072.1| hypothetical protein CLOBOL_02565 [Clostridium bolteae ATCC
           BAA-613]
          Length = 812

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 219/735 (29%), Positives = 341/735 (46%), Gaps = 88/735 (11%)

Query: 5   VVQKAQIPFGKSL----------EESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNS 53
           + + A  P GK+L          EE +    QT+ A+  ++ +  +  S I DI   L  
Sbjct: 18  LTEYAASPLGKALCQNLSPSSDLEEVRTWQAQTTDAVTRIRLKGSVSFSGIRDIGDSLKR 77

Query: 54  AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELD----GDSLQRYSPLLELLKNCNFL 109
              G  LS  E+ ++   L              E D    G+    +  L  L      L
Sbjct: 78  LDIGSSLSIPELLSISSLLTVAARAKAYGRHDGEDDARGTGEPQDDFDSLEPLFAGLEPL 137

Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGG 165
           T L  +I  CI  +  +  D AS  L  +R   K    R    L+S+L    + +  A  
Sbjct: 138 TPLNNEIKRCILSEDEVA-DDASPGLSHVRRSMKVTADRIHTQLNSILNSNRSYLQDA-- 194

Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
               +IT R  R C+ +K+ +K  +  G+  + S++G+T F+EP   +  NN    L   
Sbjct: 195 ----VITMRDGRYCLPVKSEYKNQV-SGMVHDQSATGSTLFIEPMAIIRLNNEMRELEIQ 249

Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
           E  E  A+L+ L+ + A    E++  M+ + ++D  FA+AG A+      P+ + + +  
Sbjct: 250 EQKEIEAVLASLSNQAAPCTEELRMDMELLAQLDFIFAKAGLARHYKCSAPVFNDKGY-- 307

Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
               I+I+  +HPLL               NP                       VPI++
Sbjct: 308 ----IHIKDGRHPLL---------------NP--------------------QAVVPINV 328

Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
            +  E  ++++TGPNTGGKT S+KT+GL +LM ++GL++PA     L  FD + ADIGD 
Sbjct: 329 WLGREFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGLHIPAWEGSELAIFDQVFADIGDE 388

Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
           QS+EQ+LSTFS H++ IV IL      SL L DE+G+GTDP+EG ALA +IL +L +   
Sbjct: 389 QSIEQSLSTFSAHMTNIVRILNEADSRSLCLFDELGAGTDPTEGAALAIAILSFLHNMKC 448

Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
             + TTHY++L          ENA  EF++ETL+PTYR+L G  G SNA  I++ +G   
Sbjct: 449 RTMATTHYSELKVFALSTPGVENACCEFNVETLQPTYRLLIGIPGKSNAFAISQKLGLPG 508

Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
            II  A+  +     E +     +L  SL   R  +E +     +   EI  L   +  +
Sbjct: 509 YIIDDAKSHL-----EAKDESFEDLLTSLESSRLTIEKEQAEINAYKDEIASLKNRLTQK 563

Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 645
            + LD R   +    T++ Q+ L  AK   D  ++   N+L  +S      + KE E+  
Sbjct: 564 EERLDERKDKILKNATEEAQRILREAKETADQTIKQI-NKLAASSG-----VGKELEAER 617

Query: 646 AAIVEA-HRPDDDFSVSETNTSS-FTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
           A + +   + D+  +V     S   +P   + G+ V V S+  K  TV  +P     + V
Sbjct: 618 ARLRDQLKKTDEKLTVKPKGPSQPISPKKLKIGDGVKVLSMNLK-GTVSTLPNARGDLYV 676

Query: 701 QYGKMRVRVKKNNIR 715
           Q G +R  V   NIR
Sbjct: 677 QMGILRSLV---NIR 688


>gi|326391467|ref|ZP_08213002.1| MutS2 family protein [Thermoanaerobacter ethanolicus JW 200]
 gi|392940299|ref|ZP_10305943.1| LOW QUALITY PROTEIN: MutS2 family protein [Thermoanaerobacter
           siderophilus SR4]
 gi|325992493|gb|EGD50950.1| MutS2 family protein [Thermoanaerobacter ethanolicus JW 200]
 gi|392292049|gb|EIW00493.1| LOW QUALITY PROTEIN: MutS2 family protein [Thermoanaerobacter
           siderophilus SR4]
          Length = 791

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 183/572 (31%), Positives = 294/572 (51%), Gaps = 60/572 (10%)

Query: 7   QKAQ-IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
           QKA  I   K +EE ++ L+  + A++ + S        EDI   +  A    +L   E+
Sbjct: 33  QKASDIVIKKDIEEIERELDLLNEAISFISSYGGISFAFEDIRDYIKKAQIDSVLYNQEL 92

Query: 66  CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
             +++ L  V+ +        E D     R+  L E  K    +  LE++I   I  +  
Sbjct: 93  LKIKKFLNLVSQIKGYFKNLQESD-----RFVRLKEYDKKVLPIKNLEKRIENIIISEDE 147

Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
           I  D AS  L+ +R ++    E + + L  + +   +   + +P+IT R+ R  V +K  
Sbjct: 148 I-ADDASPMLKALRRQKLSINEKIRATLNSIIST--RQKELQEPIITVRQGRYVVPVKQE 204

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           ++     GI  + SSSGAT F+EP   V+ NN   ++   E  E   IL  L+ E+ K  
Sbjct: 205 YRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELKEKQEIQRILFELSQEVKKYS 263

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
           + +   ++ V ++D  FA+A ++  +  V P L++  +      IN++  +HPL+     
Sbjct: 264 QILFDDIEIVSDLDFIFAKAKYSLKLKAVRPELNTMGY------INLKKARHPLI----- 312

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                             N E+ V            PIDI +  +   +VITGPNTGGKT
Sbjct: 313 ------------------NQEVIV------------PIDIYIGDQFNTLVITGPNTGGKT 342

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KT+GL +LM+ AGL +PA+   ++  F+ +  DIGD QS+EQ+LSTFS H++ IV I
Sbjct: 343 VTLKTVGLLTLMAMAGLNIPAEERSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVSI 402

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           L+ V++  LVL+DE+G+GTDP EG ALA SIL  L       + TTHY++L     K   
Sbjct: 403 LQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGAKTIATTHYSELKQYALKAPG 462

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQ 543
            ENA+ EF +ETL+PTY+++ G  G SNA  I+K +G  ++II+ A+K +  E L+ E  
Sbjct: 463 VENASVEFDVETLKPTYKLIIGLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE-- 520

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEI 575
                ++   +  +RR+LE   +  A L  ++
Sbjct: 521 -----DIIADVESKRRELEKANQEIAFLKKDV 547


>gi|357050429|ref|ZP_09111627.1| MutS2 protein [Enterococcus saccharolyticus 30_1]
 gi|355381082|gb|EHG28209.1| MutS2 protein [Enterococcus saccharolyticus 30_1]
          Length = 787

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 211/693 (30%), Positives = 338/693 (48%), Gaps = 95/693 (13%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           IE+I   +     G  L+  E+  V R L   N + +   + +    DS   +  L E  
Sbjct: 68  IENIRPQMKRIEIGADLNGLELAQVGRVLVTANELKRFFEDLS----DSEIEFERLYEWE 123

Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQ 159
           K    L  L  ++   +D    +  D AS +L +IR   +R+     E LDSL++   A+
Sbjct: 124 KQLVTLPTLSRRLKEAVDEDGRLT-DEASPELRVIRQNIRRSERTIRETLDSLVRGGNAK 182

Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
                 +   ++T R  R  + +K  ++ +   G+  + SSSG T F+EPK  V+ NN  
Sbjct: 183 Y-----LSDTIVTMRNERYVIPVKQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVDQNN-- 234

Query: 220 VRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
            RL   +IAE T I   L+ L+AE+A  +REI +    +  +D   A+A F + +  + P
Sbjct: 235 -RLRQHQIAERTEIERILAELSAELAPYQREILHNAYVIGMMDFMNAKARFGKELQAIVP 293

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
            +++ +HV F  +      +HPL+                    D E             
Sbjct: 294 AINTDNHVVFKQA------RHPLI--------------------DQEKV----------- 316

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
               VP DI +  + + VVITGPNTGGKT ++KTLGL  +M ++GL +      ++  F 
Sbjct: 317 ----VPNDIAIGEDYQAVVITGPNTGGKTITLKTLGLLQIMGQSGLPILVDEESQMGIFQ 372

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            I ADIGD QS+EQ+LSTFS H++ IVD+L+ V   SLVL DE+G+GTDP EG ALA +I
Sbjct: 373 EIFADIGDEQSIEQSLSTFSSHMTTIVDVLKKVDHTSLVLFDELGAGTDPQEGAALAIAI 432

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L  L  R    + TTHY +L           NA+ EF ++TL PTYR+L G  G SNA  
Sbjct: 433 LDELGARSAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFE 492

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I+K +G D +II++A+++++               Q L E    LE++ +   + + E+ 
Sbjct: 493 ISKRLGLDTQIIEQAKQIMDGES------------QDLNEMIADLENRRKMTETEYLEMR 540

Query: 577 DLYREIEDEAKDL--------DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLR 627
               E E   K+L        + R A L AK  ++  Q +  AK + + ++ D  N QL 
Sbjct: 541 HYVEEAERLQKELKQAYNFFFEEREAEL-AKARKKANQIVEEAKEESEKIISDIRNMQLS 599

Query: 628 DASADEINSLIKESE--SAIAAIVEAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGD 683
                   S +KE E  +A   + + H+ +      V +   ++ T + G++V V S G 
Sbjct: 600 SG-----QSHVKEHELIAARTKLSDLHQEEHLQKNKVLQKAKAAKTLKVGDEVLVTSYGQ 654

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
           +  T+++  G      VQ G +++ + +++++P
Sbjct: 655 R-GTLIKKMGQSQW-QVQLGILKMTLPESDLQP 685


>gi|423400603|ref|ZP_17377776.1| MutS2 protein [Bacillus cereus BAG2X1-2]
 gi|423457214|ref|ZP_17434011.1| MutS2 protein [Bacillus cereus BAG5X2-1]
 gi|423478688|ref|ZP_17455403.1| MutS2 protein [Bacillus cereus BAG6X1-1]
 gi|401148991|gb|EJQ56474.1| MutS2 protein [Bacillus cereus BAG5X2-1]
 gi|401655327|gb|EJS72861.1| MutS2 protein [Bacillus cereus BAG2X1-2]
 gi|402426719|gb|EJV58834.1| MutS2 protein [Bacillus cereus BAG6X1-1]
          Length = 786

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 210/714 (29%), Positives = 349/714 (48%), Gaps = 77/714 (10%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ   +  I    +T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREKVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ- 671
           + + ++++   QLR A    IN  +K+ E   A + +E   P+      + N  +  P+ 
Sbjct: 586 EAEGIIREL-RQLRKAQL--IN--VKDHELIEAKSRLEGTAPEL-VKKQKVNVKNTAPKQ 639

Query: 672 ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
               G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 640 QLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|352518027|ref|YP_004887344.1| MutS2 protein [Tetragenococcus halophilus NBRC 12172]
 gi|348602134|dbj|BAK95180.1| MutS2 protein [Tetragenococcus halophilus NBRC 12172]
          Length = 792

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 201/633 (31%), Positives = 304/633 (48%), Gaps = 89/633 (14%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           +  IE+I   +     G  L+  E+  + R L     V   L E  E D     R     
Sbjct: 68  IPKIENIQAHMKRIEIGADLNGVELAQISRVLTTTAEVNTFLEELKE-DETPFNRLYAWQ 126

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKV 156
           E L     L  L +++   ID    +  D ASE+L+ IR    R+     ENLD ++   
Sbjct: 127 EQL---TALPALRKRLKSAIDEDGRVT-DEASEELKNIRRNITRSEQSIRENLDGIIHGK 182

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
                QA  +   L+T R  R  + ++  ++ +   G+  + SSSG T F+EP   VE N
Sbjct: 183 -----QARYLSDALVTMRNERYVIPVRQENRNVF-GGVVHDQSSSGQTLFIEPGQVVEMN 236

Query: 217 NMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
           N   RL   +IAE      ILS L+AE+  S +EI +    + + D   A+A FA+ +  
Sbjct: 237 N---RLRQYQIAERDEIARILSELSAELVPSRKEIMHNAYVIGKFDFMNAKARFAKDLKA 293

Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
           V P++   +HV F  +      +HPLL  + +                            
Sbjct: 294 VVPLVDEDNHVYFKQA------RHPLLDQTQV---------------------------- 319

Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
                  +  DI +  + + VVITGPNTGGKT ++KTLGL  LM +AGL +PA    ++ 
Sbjct: 320 -------IANDIMIGEDYQAVVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEDSQMG 372

Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
            F+ + ADIGD QS+EQNLSTFS H++ IVD+L  V + SLVL DE+G+GTDP EG ALA
Sbjct: 373 IFNEVFADIGDEQSIEQNLSTFSSHMTTIVDVLNQVDKNSLVLFDELGAGTDPQEGAALA 432

Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
            +IL  L  +    + TTHY +L        +  NA+ EF ++TL PTYR+L G  G SN
Sbjct: 433 IAILDDLAAKQAYVMATTHYPELKVYGYNRPKTVNASMEFDVDTLSPTYRLLIGVPGRSN 492

Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK--------LESQA 565
           A  I++ +G D+ +I  A+++   +  E Q    +E+   L E RRK        L +  
Sbjct: 493 AFEISRRLGLDQTLIDSAKQI---MNGESQD--LNEMITDL-ENRRKMAETEYLELRNYV 546

Query: 566 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
             A  LH ++ + Y+   ++ ++     A  ++K    V+Q    AK Q D ++ +    
Sbjct: 547 SKAKQLHEDLQEAYQYFYEQKEN---EFAKARSKANDIVEQ----AKDQSDEIITN---- 595

Query: 626 LRDASADEINSLIKESE--SAIAAIVEAHRPDD 656
           LR          +KE+E   A   + +  +P+D
Sbjct: 596 LRKIQQQSGQKNVKENELIQAKGELNQLQQPED 628


>gi|331092295|ref|ZP_08341123.1| hypothetical protein HMPREF9477_01766 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330401727|gb|EGG81306.1| hypothetical protein HMPREF9477_01766 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 791

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 168/498 (33%), Positives = 253/498 (50%), Gaps = 52/498 (10%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           I D AS  L+ IR   +   E + S L  + +   ++  +   LIT R  R C+ +KA +
Sbjct: 145 ISDDASSTLKHIRRSIQLLNERVHSTLTSLVSGSLKSY-LQDSLITMRGDRYCIPVKAEY 203

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           +  +P G+  + SS+G+T F+EP   V+ NN    L   E  E   ILS L+ E     +
Sbjct: 204 RSQVP-GMIHDQSSTGSTLFIEPMAIVKLNNDLKELYGKEQEEIQVILSRLSEEAGGYIQ 262

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           E++     + E+D  FA+   A  M+   PI +++ +      I+I   +HPLL    + 
Sbjct: 263 ELRTNFAILTELDFIFAKGMLALSMNAGKPIFNTKGY------IHIREGRHPLLDKKKV- 315

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                                             VPI + +  +  ++++TGPNTGGKT 
Sbjct: 316 ----------------------------------VPITLTLGGDFDLLIVTGPNTGGKTV 341

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           S+KT+GL +LM +AGL++PA +   L  F  + ADIGD QS+EQ+LSTFS H++ IV  L
Sbjct: 342 SLKTVGLFTLMGQAGLHIPALDRSELAVFHEVYADIGDEQSIEQSLSTFSSHMTNIVSFL 401

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           + V   SLVL DE+G+GTDP+EG ALAT+IL +L  R    + TTHY++L          
Sbjct: 402 KDVDEHSLVLFDELGAGTDPTEGAALATAILSHLHQRGIRTMATTHYSELKIFALSTEGV 461

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
           ENA  EF +ETLRPTYR+L G  G SNA  I+  +G    II  A++       +  +H 
Sbjct: 462 ENACCEFDVETLRPTYRLLLGIPGKSNAFAISGKLGLPDYIIDEAKR-------QLSEHD 514

Query: 547 KS--ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 604
           +S  +L   L E R+ +E +    AS   EI  L   +E +   LD +   +  +  ++ 
Sbjct: 515 ESFEDLLSDLEESRKTIEKERAEIASYKQEIQQLKSRVEKKQVRLDEQKERILREANEKA 574

Query: 605 QQELNFAKVQIDTVVQDF 622
              L  AK   D  +++F
Sbjct: 575 NAILRDAKEVADETMKNF 592


>gi|228993275|ref|ZP_04153191.1| hypothetical protein bpmyx0001_40070 [Bacillus pseudomycoides DSM
           12442]
 gi|228766343|gb|EEM14986.1| hypothetical protein bpmyx0001_40070 [Bacillus pseudomycoides DSM
           12442]
          Length = 786

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 216/712 (30%), Positives = 344/712 (48%), Gaps = 89/712 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + K+  E    +G  L    P+L
Sbjct: 65  LGGIFDIRPNVKRAKIGSMLSPHELLDIASTMYGSRQM-KRFIEDMVDNGVEL----PIL 119

Query: 101 E-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETYVAQIVSLYDLEKKITSCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL +LT E+A     +   ++ +  +D  FARA +A+ +    
Sbjct: 234 NNALQEARVKEKQEVERILMVLTEEVALEADTVLANVEVIANLDFIFARAFYAKRIKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++++ +      +N+   +HPL+               +P                  
Sbjct: 294 PIVNNERY------MNLRQARHPLI---------------DP------------------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             +  VP DI +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   +  F
Sbjct: 315 --EIIVPNDIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVLDESEICVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+EQ+LSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SNA 
Sbjct: 433 ILDEVYNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
            I+K +G   ++I RA+  +  +  + E    +  E  ++   E  + E   + +  LH 
Sbjct: 493 EISKRLGLSDRVIDRARNHIGTDTNKIENMIAKLEESQKNAEREWNEAEEHRKQSEKLHR 552

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
           E+     E  DE     R    LKA+  ++ ++++  AK + + ++ +   QLR A    
Sbjct: 553 ELQRQIIEFNDE-----RDERLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQLAN 604

Query: 634 I--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLAT 687
           +  + LI+     E A   +V+  R      V   NT+     + G++V V + G K   
Sbjct: 605 VKDHELIEAKSRLEGAAPELVKKQR------VKVKNTAPKQQLRAGDEVKVLTFGQKGQL 658

Query: 688 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTC 739
           + +V   D+   VQ G ++++VK++++  I          P P  +K V T 
Sbjct: 659 LKKV--SDNEWNVQIGILKMKVKESDMEYI--------NTPQPVEKKAVATV 700


>gi|402299950|ref|ZP_10819509.1| Clostridial MutS2-related protein [Bacillus alcalophilus ATCC
           27647]
 gi|401724900|gb|EJS98225.1| Clostridial MutS2-related protein [Bacillus alcalophilus ATCC
           27647]
          Length = 633

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 158/514 (30%), Positives = 261/514 (50%), Gaps = 53/514 (10%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    + +I  I+     G +L PSE+ ++   LR    + K  
Sbjct: 47  LNETTEARAILDAESHIPFMGVSNIENIVQKLEKGMILDPSELISISDFLRGCRKM-KSF 105

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
             A E     L  Y+  +  L+N      +EE+I  CI      +  +AS++L+ IR + 
Sbjct: 106 MLAKEFFAPVLSSYALSMSELQN------VEEEINHCIKNNR--VDAQASKELKRIRRQI 157

Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
               E ++  L K          I +  I+K+  R+ + IKAS+K  +  G  + VSS G
Sbjct: 158 DLTEEKMNDRLHKFLNSSANKKYIQEFFISKKDGRLTIPIKASYKNQV-SGTIVEVSSKG 216

Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
           +T F+EP    + N     L   E  EE  IL+ L+  I +   E+K  MD + + D+ F
Sbjct: 217 STVFLEPSTVAKLNGELASLKAEETMEEYQILATLSGMIIEKNHELKMNMDLISQYDMVF 276

Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
           A+A F++ + G+ P ++   +      I I G +HPLL G                    
Sbjct: 277 AKAKFSKVIQGIEPKVNEHGY------IKIVGGQHPLLTGKV------------------ 312

Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
                             VP+  ++  + R +VITGPN GGKT  +KT+GL ++   +G 
Sbjct: 313 ------------------VPLQFEIGEDYRSLVITGPNAGGKTIVLKTIGLLTMAVMSGF 354

Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
           ++ A     +  F+ I  DIGD+QSLE  LSTFS H+  + +I++  +  +L+L DEIGS
Sbjct: 355 HIKADKETEVSIFENIFVDIGDNQSLENALSTFSSHMKNVSEIMKQANNHTLLLFDEIGS 414

Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
           GT+P+EG ALA SIL        + V TTHY ++    ++   F NAA +F+ +TL P Y
Sbjct: 415 GTEPNEGAALAISILDEFYQMGCMTVATTHYGEIKRYSEQHDDFMNAAMQFNQQTLEPLY 474

Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           +++ G +G+SNAL I++ +  + +++QRA+  ++
Sbjct: 475 QLMIGKSGESNALWISRKMQINEQVLQRAKGYMQ 508


>gi|206977729|ref|ZP_03238620.1| MutS2 family protein [Bacillus cereus H3081.97]
 gi|206744030|gb|EDZ55446.1| MutS2 family protein [Bacillus cereus H3081.97]
          Length = 786

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 207/718 (28%), Positives = 346/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+L   +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +       HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLKQAC------HPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I++A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|28211873|ref|NP_782817.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium tetani E88]
 gi|38604782|sp|Q891U1.1|MUTS2_CLOTE RecName: Full=MutS2 protein
 gi|28204315|gb|AAO36754.1| DNA mismatch repair protein mutS [Clostridium tetani E88]
          Length = 786

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 222/720 (30%), Positives = 341/720 (47%), Gaps = 77/720 (10%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           +L E +  L +T  AL ++Q++   P +   + DI  IL       +L P ++  V   L
Sbjct: 39  NLYEVEMHLEETMEALDLLQTKGEPPFE--GVYDIRDILIRVEKAMVLLPGQLLKVASIL 96

Query: 73  ----RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
               R  + V +K  E       +++     +ELLK       LEE I F I      I 
Sbjct: 97  KSSRRFKDYVGRKHEETPH---KNIEDICEGIELLKG------LEESI-FNIVISDDEIA 146

Query: 129 DRASEDLELIRAE-RKRN---MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
           DRAS  L  IR   R +N    + ++SL++K +  + ++      + T R  R  + ++A
Sbjct: 147 DRASLKLYGIRRSLRDKNDSLRDRVNSLVRKYSPYLQES------IYTIRGDRYVLPVRA 200

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            HK  +P G+  + SSSGAT F+EP   V  NN    L   E  E   IL  L+ ++  +
Sbjct: 201 EHKGSVP-GLVHDQSSSGATLFIEPMSLVNLNNEIKELLLKEREEIERILEELSLKVYNN 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              +      + E+D  FA+A FA   +   P +S    V       IEG KHPL+    
Sbjct: 260 LDVVNVNAKVIWELDFIFAKAKFASHNNCTLPKVSEDGIVDI-----IEG-KHPLI---- 309

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                           D E                 VP DI +  +   ++ITGPNTGGK
Sbjct: 310 ----------------DTEKV---------------VPTDIYLGKDFTSLIITGPNTGGK 338

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KTLGL  +M  +GL +PAK +  + +F+ I ADIGD QS+EQ+LSTFS H+  IVD
Sbjct: 339 TVTLKTLGLIHIMGLSGLLIPAKENSTIAFFEEIFADIGDEQSIEQSLSTFSSHMVNIVD 398

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           I+     +SLVL DE+G+GTDP+EG ALA SIL+ LR R    V TTHY++L     K  
Sbjct: 399 IISKADHKSLVLFDELGAGTDPTEGAALAISILENLRRRKCKIVATTHYSELKGYALKTE 458

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
             ENA+ EF +ETLRPTYR+L G  G SNA  I+K +G    II+ A+  +     E   
Sbjct: 459 DVENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLGEDIIEEAKNNI-----ESDS 513

Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 604
            +   L + L  +  K    AR A     E   L  + ED+ K ++     L     ++ 
Sbjct: 514 LKFEALIEKLQSKSIKASDDARRAEMYKLEADRLKDKYEDKLKIVEETREKLLKGAQEEA 573

Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
           ++ +  AK + D ++++     +   +      ++E    + + +      ++    E  
Sbjct: 574 KKLIKEAKEEADEILKNIRELEKMGYSSTARQKLEEERKKLNSKIHKLEEKEENLNKEKG 633

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
                   GE+V++  L D+   ++  P +   V VQ G M++ VK +++R +   K +N
Sbjct: 634 KKIKEINLGEEVYLPKL-DQKVIILSKPDNRGEVQVQAGIMKINVKLDDLRLVDKPKEEN 692


>gi|255654753|ref|ZP_05400162.1| putative DNA mismatch repair protein [Clostridium difficile
           QCD-23m63]
 gi|296449499|ref|ZP_06891276.1| exopolyphosphatase [Clostridium difficile NAP08]
 gi|296878178|ref|ZP_06902193.1| exopolyphosphatase [Clostridium difficile NAP07]
 gi|296261563|gb|EFH08381.1| exopolyphosphatase [Clostridium difficile NAP08]
 gi|296430931|gb|EFH16763.1| exopolyphosphatase [Clostridium difficile NAP07]
          Length = 792

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 202/697 (28%), Positives = 343/697 (49%), Gaps = 66/697 (9%)

Query: 19  ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
           E + +L +TS A +++ +   + L  I DI   +  A  G  L P  +  +  TLR    
Sbjct: 42  EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101

Query: 78  VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
           +   L+ + E D +      P+++ L N  ++  ++E++I   I  ++ I  D AS  L 
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            IR    +  +++ S L  + +       +   +I+ R  R  V +KA ++  +  GI  
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKAEYRSQVA-GIVH 214

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + SSSGAT F+EP   VE NN   +L   E  E   ILS L+A + +   ++    + + 
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
            +D AF++   +  M G+ P L+       D  +NI+  +HPLL                
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                 +  ++   ++  G  DF              +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+++GL++PA     +  +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTTDSLVI 413

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA ++L+ +       + TTHY++L       +  ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIE 473

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
           TL PTY++L G  G SNA  I++ +G    +I RA++ +  E +  E       ++ Q++
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYINTENIALE-------DVLQNV 526

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
            + R K       A  L  EI  L  E +++ + L  +   +  K   +    +  AK +
Sbjct: 527 EKNRIKAVEDREEAERLKEEIERLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEE 586

Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTP 670
           +D ++++  +  ++ ++ E N  I+E    + + + + +P         VS        P
Sbjct: 587 VDIIIKELRSLEQERASKEKNRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP 646

Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
             GE+V V +L     +VV V       +VQ G M++
Sbjct: 647 --GEEVKVITLNQN-GSVVSVDKKRKEAVVQIGIMKM 680


>gi|443632188|ref|ZP_21116368.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. inaquosorum KCTC 13429]
 gi|443348303|gb|ELS62360.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. inaquosorum KCTC 13429]
          Length = 785

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 214/730 (29%), Positives = 355/730 (48%), Gaps = 75/730 (10%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           S++E +K L++   A A+++ +       + DI G L  A  G +LSPSE   +   L A
Sbjct: 39  SIDEIKKQLDEVDEASAIIRLRGQAPFGGLTDIRGALRRAEIGSVLSPSEFTEISGLLYA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
           V  +   +++ AE DG  +    PL+ +  +    L++LE  I  CID    + LD AS 
Sbjct: 99  VKQMKHFISQMAE-DGVDI----PLIHQHAEQLITLSDLERDINSCIDDHGEV-LDHASG 152

Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L  IR + K    R  + L+S+L+  +A       +   ++T R  R  + +K  ++  
Sbjct: 153 TLRGIRTQLKTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
              GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT   A+   E+ 
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEHTAEHTEELF 267

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
             +  +  +D  FA+A +A+ +    PI++    V    +      +HPLL         
Sbjct: 268 QDLQVLQTLDFIFAKARYAKAVKATKPIVNDNGFVRLKKA------RHPLL--------- 312

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                  P    V N                   DI++  +   +VITGPNTGGKT ++K
Sbjct: 313 -------PPDQVVAN-------------------DIELGGDFSTIVITGPNTGGKTVTLK 346

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           TLGL +LM+++GL++PA        F+ + ADIGD QS+EQ+LSTFS H+  IVDILE V
Sbjct: 347 TLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVDILEHV 406

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
           +  SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA
Sbjct: 407 NENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTHYPELKAYGYNREGVMNA 466

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF +ETL PTY++L G  G SNA  I+K +G    II +A+  +       + +    
Sbjct: 467 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAKSEM-----TAEHNEVDT 521

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
           +  SL + +++ E +     S+  E   L++E++ +  +L+ +   +  +  QQ  +++ 
Sbjct: 522 MIASLEQSKKRAEEELSETESIRKEAEKLHKELQQQIIELNSKKDKMLEEAEQQAAEKVK 581

Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
            A  + + ++ +  +   +  + + + LI  ++  +   V            +T    F 
Sbjct: 582 AATKEAEDIIHELRSIKEEHKSFKDHELIN-AKKRLEGAVPTFEKSKKPEKPKTQKRDFK 640

Query: 670 PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA 729
           P  G++V V + G K  T++E  G ++   VQ G ++++VK+ ++  I ++       P 
Sbjct: 641 P--GDEVKVLTFGQK-GTLLEKTGGNEWN-VQIGILKMKVKEKDLEFIKSA-------PE 689

Query: 730 PRLRKQVCTC 739
           P+  K +   
Sbjct: 690 PKKEKIITAV 699


>gi|239628827|ref|ZP_04671858.1| MutS2 family protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518973|gb|EEQ58839.1| MutS2 family protein [Clostridiales bacterium 1_7_47FAA]
          Length = 843

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 211/653 (32%), Positives = 316/653 (48%), Gaps = 79/653 (12%)

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
           + A E D DSL+   PL   L+    LT L  +I  CI  +  I  D AS  L  +R   
Sbjct: 147 SNAPEDDYDSLE---PLFAGLEP---LTPLNNEIKRCILSEDEIA-DDASPGLSHVRRSM 199

Query: 143 K----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
           K    R    L+S+L    + +  A      +IT R  R C+ +K+ +K  +  G+  + 
Sbjct: 200 KVAADRIHTQLNSILNSNRSYLQDA------VITMRDGRYCLPVKSEYKNQV-SGMVHDQ 252

Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
           SS+G+T F+EP   V+ NN    L   E  E  A+L+ L+ + A    E++   + + ++
Sbjct: 253 SSTGSTLFIEPMAIVKLNNEIRELEIQEQKEIEAVLASLSNQAAPYCGELRMNQELLAQL 312

Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
           D  FA+AG A+      P+ + + +      I+I+  +HPLL               NP 
Sbjct: 313 DFIFAKAGLARHYKCSAPVFNDRGY------IHIKDGRHPLL---------------NPQ 351

Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
            +                    VPI+I +  +  ++++TGPNTGGKT S+KT+GL +LM 
Sbjct: 352 TA--------------------VPINIWLGRDFDLLIVTGPNTGGKTVSLKTVGLFTLMG 391

Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
           +AGL++PA     L  FD + ADIGD QS+EQ+LSTFS H++  V IL   +  SL L D
Sbjct: 392 QAGLHIPAWEGSELAVFDEVFADIGDEQSIEQSLSTFSAHMTNTVRILNEANPRSLCLFD 451

Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
           E+G+GTDP+EG ALA +IL +L +     + TTHY++L          ENA  EFS+ETL
Sbjct: 452 ELGAGTDPTEGAALAIAILTFLHNMKCRTMATTHYSELKVFALTTPGVENACCEFSVETL 511

Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
           +PTYR+L G  G SNA  I+  +G    II  A     R   E +     +L  SL   R
Sbjct: 512 QPTYRLLIGVPGKSNAFAISSKLGLPDYIIDEA-----RNHLEAKDVSFEDLLTSLESSR 566

Query: 559 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 618
             +E +     +   EI  L   +  + + LD R   +    T++ Q+ L  AK   D  
Sbjct: 567 LTIEKEQAEINAYKDEIAKLKSRLTQKEERLDERKDKVIRSATEEAQRILREAKETADQT 626

Query: 619 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS-FTP---QFGE 674
           ++   N+L   +   IN  ++E  S +    +  + DD  +V     S   +P   + G+
Sbjct: 627 IKQI-NKLTAGAG--INKELEEQRSRLRD--QLKKTDDKLAVKAKGPSQPISPKKLKIGD 681

Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP--NSKRKNA 725
            V V S+  K  TV  +P     + VQ G +R  V   NIR +   N K  NA
Sbjct: 682 GVKVLSMNLK-GTVSTLPNSKGDLYVQMGILRSLV---NIRDLELLNEKDINA 730


>gi|256751292|ref|ZP_05492172.1| MutS2 family protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749847|gb|EEU62871.1| MutS2 family protein [Thermoanaerobacter ethanolicus CCSD1]
          Length = 791

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 183/572 (31%), Positives = 295/572 (51%), Gaps = 60/572 (10%)

Query: 7   QKAQ-IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
           QKA  I   K +EE ++ L+  + A++ + S        EDI   +  A    +L   E+
Sbjct: 33  QKASDIVIKKDIEEIERELDLLNEAISFISSYGGISFAFEDIRDYIKKAQIDSVLYNQEL 92

Query: 66  CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
             +++ L  V+ +        E D     R+  L E  K    +  LE++I   I  +  
Sbjct: 93  LKIKKFLNLVSKIKGYFKNLQESD-----RFVRLKEYDKKVLPIKNLEKRIENIIISEDE 147

Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
           I  D AS  L+ +R ++    E + + L  + +   +   + +P+IT R+ R  V +K  
Sbjct: 148 I-ADDASPMLKSLRRQKLSINEKIRATLNSIIST--RQKELQEPIITVRQGRYVVPVKQE 204

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           ++     GI  + SSSGAT F+EP   V+ NN   ++   E  E   IL  L+ E+ K  
Sbjct: 205 YRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELKEKQEIQRILFELSQEVKKYS 263

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
           + +   ++ V ++D  FA+A ++  +  V P L++  +      IN++  +HPL+     
Sbjct: 264 QILFDDIEIVSDLDFIFAKAKYSLKLKAVRPELNTMGY------INLKKARHPLI----- 312

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                             N E+ V            PIDI +  +   +VITGPNTGGKT
Sbjct: 313 ------------------NQEVIV------------PIDIYIGDQFNTLVITGPNTGGKT 342

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KT+GL +LM+ AGL +PA+   ++  F+ +  DIGD QS+EQ+LSTFS H++ IV I
Sbjct: 343 VTLKTVGLLTLMAMAGLNIPAEERSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVSI 402

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           L+ V++  LVL+DE+G+GTDP EG ALA SIL  L       + TTHY++L     K   
Sbjct: 403 LQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGAKTIATTHYSELKQYALKAPG 462

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQ 543
            ENA+ EF++ETL+PTY+++ G  G SNA  I+K +G  ++II+ A+K +  E L+ E  
Sbjct: 463 VENASVEFNVETLKPTYKLIIGLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE-- 520

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEI 575
                ++   +  +RR+LE   +  A L  ++
Sbjct: 521 -----DIIADVESKRRELEKANQEIAFLKKDV 547


>gi|228967649|ref|ZP_04128670.1| hypothetical protein bthur0004_44420 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|402563934|ref|YP_006606658.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           thuringiensis HD-771]
 gi|228792025|gb|EEM39606.1| hypothetical protein bthur0004_44420 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|401792586|gb|AFQ18625.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           thuringiensis HD-771]
          Length = 786

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 209/714 (29%), Positives = 349/714 (48%), Gaps = 77/714 (10%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ      +   ++T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEVDIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ- 671
           + + ++Q+   QLR A    +N  +K+ E   A + +E   P+      + N  +  P+ 
Sbjct: 586 EAEGIIQEL-RQLRKAQL--VN--VKDHELIEAKSRLEGTAPEL-VKKQKVNVKNTAPKQ 639

Query: 672 ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
               G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 640 QLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|229169279|ref|ZP_04296990.1| hypothetical protein bcere0007_42300 [Bacillus cereus AH621]
 gi|228614174|gb|EEK71288.1| hypothetical protein bcere0007_42300 [Bacillus cereus AH621]
          Length = 786

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 209/700 (29%), Positives = 343/700 (49%), Gaps = 91/700 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  L    P+L
Sbjct: 65  LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
           NN   E R+   +  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +  
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291

Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
             PI++++ ++    +      +HPL+               +P                
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314

Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
               +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   + 
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370

Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
            F  I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430

Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
            SIL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490

Query: 514 ALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
           A  I+K +G   ++I RA+  +  +  + E    +  E  ++   ER++ E   + +  L
Sbjct: 491 AFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEHRKQSEKL 550

Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
           H E+     E  DE     R    LKA+  ++ ++++  AK + + ++ +   QLR A  
Sbjct: 551 HRELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKIEAAKKEAEGIIHEL-RQLRKAQL 602

Query: 632 DEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLG 682
             +  + LI+     E A   +V+  +          N  +  P+     G++V V + G
Sbjct: 603 VNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFG 653

Query: 683 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            K   + +V   D    VQ G ++++VK++++  I   K+
Sbjct: 654 QKGQLLKKVS--DTEWSVQIGILKMKVKESDMEYINTPKQ 691


>gi|317498567|ref|ZP_07956860.1| MutS2 family protein [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894054|gb|EFV16243.1| MutS2 family protein [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 800

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 204/691 (29%), Positives = 327/691 (47%), Gaps = 90/691 (13%)

Query: 60  LSPSEICAVRRTLRAVNN-VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           L   E+  + R L +V N V   +    +L+ DSL       EL ++   L +L  +I  
Sbjct: 84  LGTGELLDIARVLESVKNAVSYGVRMEDDLEADSLD------ELFESLVPLDDLLHEIRR 137

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
           CI  +  I  D AS  L+ IR   K+  + + + L  + +       +   ++T R  R 
Sbjct: 138 CIISEEEIS-DDASSTLKHIRRAMKQTNQKIHTQLTTLVSSASNQDKLQDAIVTMRNGRY 196

Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
           C+ +K  ++     G+  + S+SG T F+EP   V  NN    L   E +E   ILS+L+
Sbjct: 197 CIPVKQEYRSSFQ-GMIHDQSASGNTLFIEPMSVVTLNNELKELEGKEQSEIEHILSILS 255

Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
            + +    ++ +    ++ +D  FA+A +A+ +D   PI         D  INI+   HP
Sbjct: 256 EQASYGVDDLAHNQKTLVLLDFIFAKAKYAKDIDASKPIFRE------DGIINIKQGCHP 309

Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
           LL    +                                   VPI++ +  +  ++++TG
Sbjct: 310 LLDRKKV-----------------------------------VPINVSLGKDFSMLIVTG 334

Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
           PNTGGKT S+KT+GL SLM +AGL++PA     L  F  I ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTVSLKTVGLLSLMGQAGLHIPAFQGSSLGIFREIFADIGDEQSIEQNLSTFSSH 394

Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
           ++ IV I++   R+SLVL+DE+  GTDP EG ALA SIL  L  R    + TTHY++L  
Sbjct: 395 MTNIVSIVQQAHRDSLVLLDELCGGTDPIEGAALAISILSDLHGRGIKTMATTHYSELKM 454

Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
                   ENA+ EF +ETL PTYR++ G  G SNA  I++ +G D  II+ A   ++  
Sbjct: 455 FALSTNDIENASCEFDVETLSPTYRLMIGIPGKSNAFAISRKLGLDEHIIEGAADQIDES 514

Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
             +         +++++ +   LE   +T      EI++  +EIE   + L  R  ++K 
Sbjct: 515 VKD---------FETILAD---LEKSKQTIEKEQEEILEYRKEIETLRRSLKSRQDNIKE 562

Query: 599 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD-- 656
           K  + ++     A+ +   ++ + + ++ D++  E N L K++++  A     H   D  
Sbjct: 563 KRDKMLRD----AREEAHNIISEAK-EIADSTIREYNKLKKQNKNPDANKKMEHMRSDLR 617

Query: 657 ---------------DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
                            +      + F    G++V+V SL     TV  +P     + VQ
Sbjct: 618 GRMTKLEGQMAYKSKKKNKKRHEANDF--HVGDEVYVTSLS-LAGTVSTLPNAKGDLYVQ 674

Query: 702 YGKMR--VRVKKNNI-RPIPNSKRKNAANPA 729
            G MR  V +K   I +   + KR+N  N +
Sbjct: 675 MGMMRSLVNIKDLEITKTAKDVKRENQRNES 705


>gi|430743730|ref|YP_007202859.1| mismatch repair ATPase [Singulisphaera acidiphila DSM 18658]
 gi|430015450|gb|AGA27164.1| mismatch repair ATPase (MutS family) [Singulisphaera acidiphila DSM
           18658]
          Length = 693

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 188/575 (32%), Positives = 289/575 (50%), Gaps = 53/575 (9%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
              + DI   +  A  G +L   E+     TLRA+ ++ + L+   E        +  L 
Sbjct: 65  FGGLHDIRPQVRRAQIGAMLDAEELAQAVETLRAIGHLNQWLSRIGE-------EFPRLG 117

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
            L +     + +   I  C+D +   +LD AS  L  +R E  +  E +   L++    +
Sbjct: 118 GLKQEVGEFSGVVNAIEGCLDSRG-NVLDTASRKLSALRREIGQVEEKIQETLRR----M 172

Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLP---------DGIALNVSSSGATYFMEPKG 211
            ++  I      KR  R        H Y+LP          G     S+S  T ++EP+ 
Sbjct: 173 LRSNEI------KRILRFPNFTMVGHHYVLPIAKEHRGEIQGSVHRTSASNETVYIEPQA 226

Query: 212 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 271
             E +     +   E  E   IL  L+A++ +        ++ + E+DL  AR  ++  +
Sbjct: 227 IAEHSAQLSFIRAREAKEIRRILRWLSAQLGQVAESALGSLETLGELDLIHARGRYS--L 284

Query: 272 DGVCPILSSQSHVSFDSSINIEGIKHPLL----LGSSLRSLSAASSNSNPLKSDVENSEM 327
           DG      +    + +  + + G +HPLL     G +            P ++D E+   
Sbjct: 285 DGRM----TPPDFNEEGKLALRGARHPLLEAFFRGDTAPPRVPEPPREAPTEAD-ESPPA 339

Query: 328 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 387
            VGS         VPID+ +  + + +V+TGPNTGGKT ++KT+GL ++M++AGL++PA 
Sbjct: 340 IVGSQEPRTV---VPIDVHLGLQFQTLVVTGPNTGGKTVAIKTVGLLAIMAQAGLHIPAH 396

Query: 388 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 447
              +LP FD +LADIGD QSLEQ+LSTFS H+ R+ +IL   S +SLVL+DE+G+GTDP+
Sbjct: 397 QGSQLPVFDEVLADIGDEQSLEQSLSTFSSHVRRVTEILARASSKSLVLLDEMGAGTDPA 456

Query: 448 EGVALATSILQYLRDRVGL-AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
           EG AL  +IL  + D +G  A+VTTH  DL      + R ENAA EF LETLRP YR+  
Sbjct: 457 EGAALGRAILDEI-DSIGARAIVTTHLGDLKTYAFSNPRVENAAVEFDLETLRPRYRLHI 515

Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL---MEERRK--L 561
           G  G SNAL IA+ +     I+ RA K + + R   Q   + E+ Q L    EE R+  L
Sbjct: 516 GDIGQSNALQIARRLSLPEHIVARAAKYLAQGRG--QDLPELEILQKLRKDAEEARQAAL 573

Query: 562 ESQA---RTAASLHAEIMDLYREIEDEAKDLDRRA 593
            +Q+   RT  +L+  + DL R+ E++ +  D RA
Sbjct: 574 TAQSEAERTREALNQRLTDLQRQAENDERLADARA 608


>gi|254974324|ref|ZP_05270796.1| putative DNA mismatch repair protein [Clostridium difficile
           QCD-66c26]
 gi|255091720|ref|ZP_05321198.1| putative DNA mismatch repair protein [Clostridium difficile CIP
           107932]
 gi|255313448|ref|ZP_05355031.1| putative DNA mismatch repair protein [Clostridium difficile
           QCD-76w55]
 gi|255516136|ref|ZP_05383812.1| putative DNA mismatch repair protein [Clostridium difficile
           QCD-97b34]
 gi|255649232|ref|ZP_05396134.1| putative DNA mismatch repair protein [Clostridium difficile
           QCD-37x79]
 gi|260682406|ref|YP_003213691.1| DNA mismatch repair protein [Clostridium difficile CD196]
 gi|260686005|ref|YP_003217138.1| DNA mismatch repair protein [Clostridium difficile R20291]
 gi|384359986|ref|YP_006197838.1| DNA mismatch repair protein [Clostridium difficile BI1]
 gi|260208569|emb|CBA61251.1| putative DNA mismatch repair protein [Clostridium difficile CD196]
 gi|260212021|emb|CBE02571.1| putative DNA mismatch repair protein [Clostridium difficile R20291]
          Length = 792

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 201/697 (28%), Positives = 342/697 (49%), Gaps = 66/697 (9%)

Query: 19  ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
           E + +L +TS A +++ +   + L  I DI   +  A  G  L P  +  +  TLR    
Sbjct: 42  EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101

Query: 78  VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
           +   L+ + E D +      P+++ L N  ++  ++E++I   I  ++ I  D AS  L 
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            IR    +  +++ S L  + +       +   +I+ R  R  V +K+ ++  +  GI  
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVH 214

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + SSSGAT F+EP   VE NN   +L   E  E   ILS ++A + +   ++    + + 
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSEISAMVGEVSEDLISNQEILG 274

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
            +D AF++   +  M G+ P L+       D  +NI+  +HPLL                
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                 +  ++   ++  G  DF              +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+++GL++PA     +  +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA ++L+ +       + TTHY++L          ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKPGVENAAVEFDIE 473

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
           TL PTY++L G  G SNA  I++ +G    +I RA++ +  E +  E       ++ Q++
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYINTENIALE-------DVLQNV 526

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
            + R K       A  L  EI  L  E +++ + L  +   +  K   +    +  AK +
Sbjct: 527 EKNRIKAVEDREEAERLKEEIEKLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEE 586

Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTP 670
           +D ++++  N  ++ ++ E N  I+E    + + + + +P         VS        P
Sbjct: 587 VDIIIKELRNLEQERASKEKNRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP 646

Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
             GE+V V +L     +VV V       +VQ G M++
Sbjct: 647 --GEEVKVITLNQN-GSVVSVDKKRKEAVVQIGIMKM 680


>gi|313884242|ref|ZP_07818008.1| recombination and DNA strand exchange inhibitor protein
           [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620689|gb|EFR32112.1| recombination and DNA strand exchange inhibitor protein
           [Eremococcus coleocola ACS-139-V-Col8]
          Length = 785

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 215/735 (29%), Positives = 352/735 (47%), Gaps = 93/735 (12%)

Query: 40  DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPL 99
           DL+T+E        A+S  LLS ++I  + R L  ++   K+L   A L+G  L     L
Sbjct: 39  DLATVETWQAETEQALS--LLSQNQIIPIPR-LNDLSGAIKRLQVGASLNGKELADVGKL 95

Query: 100 LELLKNC-NFLTELE-------------EKIGFCIDCKLLI---------ILDRASEDLE 136
           L  +K   +F  + E             E+     DC  +I         +L  AS +L 
Sbjct: 96  LSSVKQVHDFYAKQEADNRTYPALYAWIERSIVLKDCIAMIGEAISEEGDVLSSASTELA 155

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            IR  +++  E + + L ++      A  +   LIT R +R  + +KA HK  +  G   
Sbjct: 156 RIRRAQQQTEEAVRNQLNQILKN--NASALSDTLITIRNNRYVLPVKADHKSQIK-GTVH 212

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + SS+G T ++EP+     NN    L + E  E   IL  L+ ++     +I+     + 
Sbjct: 213 DQSSTGQTLYIEPRSVETLNNRRSHLQSEENNEIAQILMDLSGQLMPYYEDIRQNQYIIG 272

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           ++D   +RA + + +  V P +S   HVS   +      +HPLL               +
Sbjct: 273 QLDYIQSRASYGRQLQAVRPKVSPDRHVSLIQA------RHPLL---------------D 311

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
           P K  V N                   +I +  + R ++ITGPNTGGKT  +KTLG+  L
Sbjct: 312 P-KQVVAN-------------------NIIIGQDYRTLIITGPNTGGKTILLKTLGILHL 351

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M +AGL++PA+   ++  FD + ADIGD QS+EQ+LSTFSGH++  +DIL+  + +SL+L
Sbjct: 352 MGQAGLHIPAQKGSQIGLFDQVFADIGDEQSIEQSLSTFSGHMTNTIDILKHATYQSLLL 411

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+GSGTDP EG ALAT+IL YL       + TTHY +L     +     NA+ EF+ E
Sbjct: 412 FDELGSGTDPQEGAALATAILDYLTGAGMTTMATTHYPELKVYAHEAPHTINASMEFNAE 471

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
           TL PTYR+L G  G SNAL I++ +G    I+++A++ V      +     +E+  +L  
Sbjct: 472 TLAPTYRLLIGIPGRSNALEISQRLGLPDYILEKARQGV-----SQDSQSINEMVANLET 526

Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQVQQELNFAKV 613
           ERR+LE+  +      A+   L +++  E    DR   +  A   K   +   +++ A+ 
Sbjct: 527 ERRRLEADHQETEHRLAQADQLLKDLRTE---YDRWVTYKDALVEKAKHEANMKVDQAQK 583

Query: 614 QIDTVVQDFENQLRDASADE-INSLIKESE--SAIAAIVEAHRPDD--DFSVSETNTSSF 668
           + D ++Q+    +RD   ++  N+ IKE           +  +P++     V +   +  
Sbjct: 584 EADKLIQE----IRDLQLEQGQNTTIKEHVLIDKKGKFDQLKQPENLRKNKVLKRQKAKQ 639

Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN-SKRKNAAN 727
             + G+ V V S G + + V +V  DD T  VQ G +++ +   ++  I +   +K+  N
Sbjct: 640 ELRVGQDVLVHSYGQRGSIVDKV--DDKTFTVQMGILKMNLPAKDLEVIESIEAKKSRVN 697

Query: 728 PAPRLRKQVCTCTSL 742
              +   +V T   L
Sbjct: 698 VQRKAGAKVTTSLDL 712


>gi|423090112|ref|ZP_17078447.1| MutS2 family protein [Clostridium difficile 70-100-2010]
 gi|357557023|gb|EHJ38589.1| MutS2 family protein [Clostridium difficile 70-100-2010]
          Length = 792

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 201/697 (28%), Positives = 343/697 (49%), Gaps = 66/697 (9%)

Query: 19  ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
           E + +L +TS A +++ +   + L  I DI   +  A  G  L P  +  +  TLR    
Sbjct: 42  EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101

Query: 78  VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
           +   L+ + E D +      P+++ L N  ++  ++E++I   I  ++ I  D AS  L 
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            IR    +  +++ S L  + +       +   +I+ R  R  V +K+ ++  +  GI  
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVH 214

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + SSSGAT F+EP   VE NN   +L   E  E   ILS L+A + +   ++    + + 
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
            +D AF++   +  M G+ P L+       D  +NI+  +HPLL                
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                 +  ++   ++  G  DF              +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+++GL++PA     +  +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA ++L+ +       + TTHY++L       +  ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIE 473

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
           TL PTY++L G  G SNA  I++ +G    +I RA++ +  E +  E       ++ Q++
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYINTENIALE-------DVLQNV 526

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
            + R K       A  L  EI  L  E +++ + L  +   +  K   +    +  AK +
Sbjct: 527 EKNRIKAVEDREEAERLKEEIEKLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEE 586

Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTP 670
           +D ++++  +  ++ ++ E N  I+E    + + + + +P         VS        P
Sbjct: 587 VDIIIKELRSLEQERASKEKNRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP 646

Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
             GE+V V +L     +VV V       +VQ G M++
Sbjct: 647 --GEEVKVITLNQN-GSVVSVDKKRKEAVVQIGIMKM 680


>gi|167767441|ref|ZP_02439494.1| hypothetical protein CLOSS21_01960 [Clostridium sp. SS2/1]
 gi|167710733|gb|EDS21312.1| MutS2 family protein [Clostridium sp. SS2/1]
 gi|291558723|emb|CBL37523.1| MutS2 family protein [butyrate-producing bacterium SSC/2]
          Length = 800

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 206/701 (29%), Positives = 330/701 (47%), Gaps = 110/701 (15%)

Query: 60  LSPSEICAVRRTLRAVNN-VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           L   E+  + R L +V N V   +    +L+ DSL       EL ++   L +L  +I  
Sbjct: 84  LGTGELLDIARVLESVKNAVSYGVRMEDDLEADSLD------ELFESLVPLDDLLHEIRR 137

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
           CI  +  I  D AS  L+ IR   K+  + + + L  + + +     +   ++T R  R 
Sbjct: 138 CIISEEEIS-DDASSTLKHIRRAMKQTNQKIHTQLTTLVSSVSNQDKLQDAIVTMRNGRY 196

Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
           C+ +K  ++     G+  + S+SG T F+EP   V  NN    L   E +E   ILS+L+
Sbjct: 197 CIPVKQEYRSSFQ-GMIHDQSASGNTLFIEPMSVVTLNNELKELEGKEQSEIEHILSILS 255

Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
            + +    ++ +    ++ +D  FA+A +A+ +D   PI         D  INI+   HP
Sbjct: 256 EQASYGVDDLAHNQKTLVLLDFIFAKAKYAKDIDASKPIFRE------DGIINIKQGCHP 309

Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
           LL    +                                   VPI++ +  +  ++++TG
Sbjct: 310 LLDRKKV-----------------------------------VPINVSLGKDFSMLIVTG 334

Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
           PNTGGKT S+KT+GL SLM +AGL++PA     L  F  I ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTVSLKTVGLLSLMGQAGLHIPAFQGSSLGIFREIFADIGDEQSIEQNLSTFSSH 394

Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
           ++ IV I++   R+SLVL+DE+  GTDP EG ALA SIL  L  R    + TTHY++L  
Sbjct: 395 MTNIVSIVQQAHRDSLVLLDELCGGTDPIEGAALAISILSDLHGRGIKTMATTHYSELKM 454

Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
                   ENA+ EF +ETL PTYR++ G  G SNA  I++ +G D  II+ A   ++  
Sbjct: 455 FALSTDDIENASCEFDVETLSPTYRLMIGIPGKSNAFAISRKLGLDEHIIEGAADQIDES 514

Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
             +         +++++ +   LE   +T      EI++  +EIE   + L  R  ++K 
Sbjct: 515 VKD---------FETILAD---LEKSKQTIEKEQEEILEYRKEIETLRRSLKSRQDNIKE 562

Query: 599 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA-IAAIVEAHRPD-- 655
           K  + ++     A+ +   ++ + + ++ D++  E N L K++++      +E  R D  
Sbjct: 563 KRDKMLRD----AREEAHNIISEAK-EIADSTIREYNKLKKQNKNPDTNKKMEHMRSDLR 617

Query: 656 ------------------------DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 691
                                   +DF V            G++V+V SL     TV  +
Sbjct: 618 GRMTKLEGQMAYKSKKKNKKRHEANDFHV------------GDEVYVTSLS-LAGTVSTL 664

Query: 692 PGDDDTVLVQYGKMR--VRVKKNNI-RPIPNSKRKNAANPA 729
           P     + VQ G MR  V +K   I +   + KR+N  N +
Sbjct: 665 PNAKGDLYVQMGMMRSLVNIKDLEITKTAKDVKRENQRNES 705


>gi|358066120|ref|ZP_09152654.1| MutS2 protein [Clostridium hathewayi WAL-18680]
 gi|356695983|gb|EHI57608.1| MutS2 protein [Clostridium hathewayi WAL-18680]
          Length = 792

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 186/609 (30%), Positives = 300/609 (49%), Gaps = 64/609 (10%)

Query: 27  TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR--TLRAVNNVWKKLTE 84
           T AA  + Q   +    ++DI   L     G  LS +E+ ++    T+ A +  + +  E
Sbjct: 51  TDAATRVRQKGGISFGGLKDIRDSLKRLEVGSSLSITELLSISSLLTISARSKAYGR-HE 109

Query: 85  AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
            +EL  DSL+      +L ++   LT +  +I  CI  +  +  D AS  L  +R    R
Sbjct: 110 ESELPNDSLE------DLFRSLEPLTPVNTEIKRCIISEEEVS-DDASPGLRHVR----R 158

Query: 145 NMENLDSLLKKVAAQIFQAG--GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
           +M+ ++  +      I  +    +  P+IT R  R C+ +K+ +K  +  G+  + SS+G
Sbjct: 159 SMKVINDRVHTQLNAILNSSRTYLQDPVITMRDGRYCLPVKSEYKNQVA-GMVHDQSSTG 217

Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
           +T F+EP   ++ NN    L   E  E  A+L+ L+ ++     E+      + ++D  F
Sbjct: 218 STLFIEPMAIIKLNNELRELEIQEQKEIEAVLADLSNQLLPYMEELASNQSVLAQLDFIF 277

Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
           ARA  ++      P  ++  +      INI+  +HPLL               +P K   
Sbjct: 278 ARAALSRHYKCSEPSFNTNGY------INIKDGRHPLL---------------DPQKV-- 314

Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
                             VPI+I +  E  ++++TGPNTGGKT S+KT+GL +LM +AGL
Sbjct: 315 ------------------VPINIHLGKEFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGL 356

Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
           ++PA +   L  F+ + ADIGD QS+EQ+LSTFS H++ IV ILE     SL L DE+G+
Sbjct: 357 HIPAFDGSELAVFEEVFADIGDEQSIEQSLSTFSAHMTNIVSILEQADSHSLCLFDELGA 416

Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
           GTDP+EG ALA ++L +L +     + TTHY++L          ENA  EFS+ETL+PTY
Sbjct: 417 GTDPTEGAALAIAVLTFLHNMKCRTMATTHYSELKVFALTTPGVENACCEFSVETLQPTY 476

Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 562
           R+L G  G SNA  I++ +G    II  A     R   E       ++   L E R  +E
Sbjct: 477 RLLIGIPGKSNAFAISRKLGLPEFIIDDA-----RTHLESSDEAFEDVLTHLEESRVTIE 531

Query: 563 SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
            +     +  A++  L   +E +   LD +      +  ++ Q+ L  AK   D  +++ 
Sbjct: 532 KEQAEIQAYKAQVAQLKARLEQKEGRLDEQKEKYMREAREEAQRILREAKETADKTIKNI 591

Query: 623 ENQLRDASA 631
            N+L ++S 
Sbjct: 592 -NKLAESSG 599


>gi|402300947|ref|ZP_10820382.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           alcalophilus ATCC 27647]
 gi|401723934|gb|EJS97346.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           alcalophilus ATCC 27647]
          Length = 785

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 191/678 (28%), Positives = 333/678 (49%), Gaps = 55/678 (8%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           I DI   +  A  G LLS SE+  +  T+     + K +T   E      +    L + +
Sbjct: 67  IYDITPHVKRASIGGLLSASELMEIASTIYGGRQLKKFITNLVEE---EERELPLLYQHV 123

Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
           +  N LT++E +I  CID    + LD AS+ L  IR + +    ++ S L+++       
Sbjct: 124 EQINPLTDVEREIKQCIDDNGHV-LDSASQTLRTIRQQVRSYESSVRSKLEQMTRSSSTQ 182

Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
             +   +IT R  R  + +K  ++     GI  + S+SG T F+EP+  V  NN      
Sbjct: 183 KMLSDAIITIRNDRFVIPVKQEYRGSF-GGIVHDQSASGQTLFIEPQVVVTLNNQLREAK 241

Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
             E  E   IL+ L+ ++A+   E+   +  +  +DL  A+A +A  +    P ++   H
Sbjct: 242 VKETREIDRILAELSRQVAEVTDELLTNISTLAVLDLIIAKAHYANAIKATSPEINEAGH 301

Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
           V    +      +HPL+    +                                   VPI
Sbjct: 302 VLLKKA------RHPLIDAGEV-----------------------------------VPI 320

Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
           DI++  E R ++ITGPNTGGKT ++KT+GL +LM ++GL++P +   ++  +  + ADIG
Sbjct: 321 DIELGGEFRSLIITGPNTGGKTVTLKTVGLLTLMMQSGLHVPVEEESKMAVYKQVFADIG 380

Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
           D QS+EQ+LSTFS H++ IV IL+ V  +SLVL DE+G+GTDP+EG ALA +IL  +  R
Sbjct: 381 DEQSIEQSLSTFSSHMTNIVQILDKVDFQSLVLFDELGAGTDPTEGAALAIAILDDVYKR 440

Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
               V TTHY++L           NA+ EF +++L+PTYR+L G  G SNA  I++ +G 
Sbjct: 441 GAAVVATTHYSELKGYAYNREGVMNASVEFDVQSLKPTYRLLIGVPGRSNAFAISRRLGL 500

Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 583
              II RA+  +     +   ++   +  SL E ++  +++   A ++  E   L+R+++
Sbjct: 501 GEAIIDRAKDQI-----DSDSNKVENMIVSLEESKKSADAEQIEAKNIRFEAEKLHRDLQ 555

Query: 584 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 643
            + ++L R    +  +  ++ +  +  AK + + ++++     +   A + + +I   + 
Sbjct: 556 KQMEELQREKELILKQAEEEAEVAVAKAKEEAEFIIRELREMQKKGLAVKEHEIIDAKKH 615

Query: 644 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
              A  +                +  P  G++V V S G K + + +V  +D   LVQ G
Sbjct: 616 LEEAAPKLTPKQKKIKKQAQQAKTLHP--GDEVKVLSFGQKGSIIEKV--NDKEYLVQIG 671

Query: 704 KMRVRVKKNNIRPIPNSK 721
            M+++V  ++++ I +SK
Sbjct: 672 IMKMKVALDDLQFIESSK 689


>gi|229099010|ref|ZP_04229945.1| hypothetical protein bcere0020_42340 [Bacillus cereus Rock3-29]
 gi|229118041|ref|ZP_04247401.1| hypothetical protein bcere0017_43110 [Bacillus cereus Rock1-3]
 gi|407707068|ref|YP_006830653.1| oxidoreductase, Gfo/Idh/MocA [Bacillus thuringiensis MC28]
 gi|423377604|ref|ZP_17354888.1| MutS2 protein [Bacillus cereus BAG1O-2]
 gi|423440711|ref|ZP_17417617.1| MutS2 protein [Bacillus cereus BAG4X2-1]
 gi|423463776|ref|ZP_17440544.1| MutS2 protein [Bacillus cereus BAG6O-1]
 gi|423533128|ref|ZP_17509546.1| MutS2 protein [Bacillus cereus HuB2-9]
 gi|423541608|ref|ZP_17517999.1| MutS2 protein [Bacillus cereus HuB4-10]
 gi|423547839|ref|ZP_17524197.1| MutS2 protein [Bacillus cereus HuB5-5]
 gi|423622372|ref|ZP_17598150.1| MutS2 protein [Bacillus cereus VD148]
 gi|228665490|gb|EEL20972.1| hypothetical protein bcere0017_43110 [Bacillus cereus Rock1-3]
 gi|228684508|gb|EEL38451.1| hypothetical protein bcere0020_42340 [Bacillus cereus Rock3-29]
 gi|401171141|gb|EJQ78374.1| MutS2 protein [Bacillus cereus HuB4-10]
 gi|401178276|gb|EJQ85456.1| MutS2 protein [Bacillus cereus HuB5-5]
 gi|401261512|gb|EJR67672.1| MutS2 protein [Bacillus cereus VD148]
 gi|401638453|gb|EJS56203.1| MutS2 protein [Bacillus cereus BAG1O-2]
 gi|402418842|gb|EJV51131.1| MutS2 protein [Bacillus cereus BAG4X2-1]
 gi|402421320|gb|EJV53580.1| MutS2 protein [Bacillus cereus BAG6O-1]
 gi|402464361|gb|EJV96057.1| MutS2 protein [Bacillus cereus HuB2-9]
 gi|407384753|gb|AFU15254.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           thuringiensis MC28]
          Length = 786

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 207/718 (28%), Positives = 346/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I D+   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  ELQDTTDEAAKVIRLKGSAPL--GGITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ   +  I    +T R  R  + +K  ++ +   G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDEKLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++ +   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIHEL-RQLRKAQLVNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|167037192|ref|YP_001664770.1| recombination and DNA strand exchange inhibitor protein
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|167040669|ref|YP_001663654.1| recombination and DNA strand exchange inhibitor protein
           [Thermoanaerobacter sp. X514]
 gi|300914710|ref|ZP_07132026.1| MutS2 family protein [Thermoanaerobacter sp. X561]
 gi|307724056|ref|YP_003903807.1| MutS2 family protein [Thermoanaerobacter sp. X513]
 gi|320115610|ref|YP_004185769.1| MutS2 family protein [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166854909|gb|ABY93318.1| MutS2 family protein [Thermoanaerobacter sp. X514]
 gi|166856026|gb|ABY94434.1| MutS2 family protein [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|300889645|gb|EFK84791.1| MutS2 family protein [Thermoanaerobacter sp. X561]
 gi|307581117|gb|ADN54516.1| MutS2 family protein [Thermoanaerobacter sp. X513]
 gi|319928701|gb|ADV79386.1| MutS2 family protein [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 791

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 183/572 (31%), Positives = 292/572 (51%), Gaps = 60/572 (10%)

Query: 7   QKA-QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
           QKA  I   K +EE ++ L+  + A++ + S        EDI   +  A    +L   E+
Sbjct: 33  QKALDIVIKKDIEEIERELDLLNEAISFISSYGGISFAFEDIRDYIKKAQIDSVLYNQEL 92

Query: 66  CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
             +++ L  V+ +        E D     R+  L E  K    +  LE++I   I  +  
Sbjct: 93  LKIKKFLNLVSQIKGYFKNLQESD-----RFVRLKEYDKKVLPIKNLEKRIENIIISEDE 147

Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
           I  D AS  L+ +R ++    E + + L  + +   +   + +P+IT R+ R  V +K  
Sbjct: 148 I-ADDASPMLKALRRQKLSINEKIRATLNSIIST--RQKELQEPIITVRQGRYVVPVKQE 204

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           ++     GI  + SSSGAT F+EP   V+ NN   ++   E  E   IL  L+ E+ K  
Sbjct: 205 YRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELKEKQEIQRILFELSQEVKKYS 263

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
           + +   ++ V E+D  FA+A ++  +  V P L++  +      IN++  +HPL+     
Sbjct: 264 QILFNDIEIVSELDFIFAKAKYSLKLKAVRPELNTMGY------INLKKARHPLI----- 312

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                             N E+ V            PIDI +  +   +VITGPNTGGKT
Sbjct: 313 ------------------NQEVVV------------PIDIHIGKQFNTLVITGPNTGGKT 342

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KT+GL +LM+ AGL +PA+   ++  F+ +  DIGD QS+EQ+LSTFS H++ IV I
Sbjct: 343 VTLKTVGLLTLMAMAGLNIPAEEKSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVSI 402

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           L+ V++  LVL+DE+G+GTDP EG ALA SIL  L       + TTHY++L     K   
Sbjct: 403 LQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGAKTIATTHYSELKQYALKIPG 462

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQ 543
            ENA+ EF +ETL+PTY+++    G SNA  I+K +G  ++II+ A+K +  E L+ E  
Sbjct: 463 VENASVEFDVETLKPTYKLIISLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE-- 520

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEI 575
                ++   +  +RR+LE      A L  ++
Sbjct: 521 -----DIIADVESKRRELEKANHEIAFLKKDV 547


>gi|149183061|ref|ZP_01861514.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. SG-1]
 gi|148849242|gb|EDL63439.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sp. SG-1]
          Length = 786

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 214/717 (29%), Positives = 343/717 (47%), Gaps = 74/717 (10%)

Query: 16  SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           +LEE  ++  +T  A ++++ +    L  I DI   +  A  G +L P E   V  T+RA
Sbjct: 39  TLEEVIRIQEETDEAASILRMKGHAPLGGIFDIRPAVKRATIGGMLGPQEFVQVASTIRA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
                  + +  E           L E +     LT LE KI   +D     ILD AS+ 
Sbjct: 99  SRQFRLFMEDLEEE---EELELPILTEKVSQMAVLTPLEHKIKAVVDENG-AILDSASDS 154

Query: 135 LELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK--Y 188
           L  IR++ + N     E L+ +++   AQ      +   +IT R  R  + +K  ++  Y
Sbjct: 155 LRQIRSQIRANEGRIREKLERMIRSSNAQKM----LSDAIITIRNDRYVIPVKQEYRGNY 210

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
               GI  + SSSG T F+EP+  V  NN    L   E  E   IL+ LT E++    ++
Sbjct: 211 ---GGIIHDQSSSGQTLFIEPEVIVSLNNALRELKLKEGQEIEKILTELTVEVSVFSEDL 267

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
             ++  + +ID  F +A + + + G  P ++    +  + +      +HP+L        
Sbjct: 268 LTIVSVLADIDFMFTKAKYGKSIKGTKPEINGNQVLKLNRA------RHPML-------- 313

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                   P+   V N                   DI++  +   +VITGPNTGGKT ++
Sbjct: 314 --------PIDEAVAN-------------------DIELGKDFSSIVITGPNTGGKTVTL 346

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL +LM+++GL +PA +   +  F  + ADIGD QS+EQ+LSTFS H+  IVDIL  
Sbjct: 347 KTIGLLTLMAQSGLQIPALDGSEMGVFQNVYADIGDEQSIEQSLSTFSSHMVNIVDILGK 406

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
           V  ESLVL DE+G+GTDP EG ALA SIL  +  R    V TTHY +L           N
Sbjct: 407 VDHESLVLFDELGAGTDPQEGAALAISILDEVHQRGAKVVATTHYPELKAYGYNRDGVVN 466

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A+ EF +ETL PTY++L G  G SNA  I+K +G   ++I RA+  +     E +     
Sbjct: 467 ASVEFDVETLSPTYKLLIGVPGRSNAFEISKRLGLADRVIDRAKSHIGTDSKEIEN---- 522

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
            +  SL + R+  E+    A  L  +   ++++++ +  +   +   L  K   +  Q +
Sbjct: 523 -MIASLEKSRKDAEADYDEAHELLKQAEMMHKDMQKQMMEFYEKRDSLYEKAEVKASQVV 581

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSS 667
             AK + + V++D      + SA+     IKE E   A   +E   P+ + S  +   +S
Sbjct: 582 EKAKEEAEGVIRDLRKMRLEKSAE-----IKEHELIDARKRIEGAAPELNRSKPKKTNAS 636

Query: 668 FTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
              +   G++V V S   K   V +V  ++    VQ G M+++VK+++++ I   K+
Sbjct: 637 QKRELKPGDEVKVLSFDQKGHLVEKVSKNE--WQVQMGIMKMKVKESDLQFIQAEKK 691


>gi|229105178|ref|ZP_04235827.1| hypothetical protein bcere0019_43120 [Bacillus cereus Rock3-28]
 gi|228678104|gb|EEL32332.1| hypothetical protein bcere0019_43120 [Bacillus cereus Rock3-28]
          Length = 786

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 207/718 (28%), Positives = 346/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I D+   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  ELQDTTDEAAKVIRLKGSAPL--GGITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ   +  I    +T R  R  + +K  ++ +   G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVREKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDEKLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++ +   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIHEL-RQLRKAQLVNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|126698288|ref|YP_001087185.1| DNA mismatch repair protein [Clostridium difficile 630]
 gi|123363473|sp|Q189Q3.1|MUTS2_CLOD6 RecName: Full=MutS2 protein
 gi|115249725|emb|CAJ67542.1| DNA mismatch repair protein [Clostridium difficile 630]
          Length = 792

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 201/697 (28%), Positives = 343/697 (49%), Gaps = 66/697 (9%)

Query: 19  ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
           E + +L +TS A +++ +   + L  I DI   +  A  G  L P  +  +  TLR    
Sbjct: 42  EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101

Query: 78  VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
           +   L+ + E D +      P+++ L N  ++  ++E++I   I  ++ I  D AS  L 
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSILR 155

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            IR    +  +++ S L  + +       +   +I+ R  R  V +K+ ++  +  GI  
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVH 214

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + SSSGAT F+EP   VE NN   +L   E  E   ILS L+A + +   ++    + + 
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
            +D AF++   +  M G+ P L+       D  +NI+  +HPLL                
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                 +  ++   ++  G  DF              +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+++GL++PA     +  +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA ++L+ +       + TTHY++L       +  ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIE 473

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
           TL PTY++L G  G SNA  I++ +G    +I RA++ +  E +  E       ++ Q++
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYINTENIALE-------DVLQNV 526

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
            + R K       A  L  EI  L  E +++ + L  +   +  K   +    +  AK +
Sbjct: 527 EKNRIKAVEDREEAERLKEEIEKLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEE 586

Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTP 670
           +D ++++  +  ++ ++ E N  I+E    + + + + +P         VS        P
Sbjct: 587 VDIIIKELRSLEQERASKEKNRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP 646

Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
             GE+V V +L     +VV V       +VQ G M++
Sbjct: 647 --GEEVKVITLNQN-GSVVSVDKKRKEAVVQIGIMKM 680


>gi|408789877|ref|ZP_11201518.1| Recombination inhibitory protein MutS2 [Lactobacillus florum 2F]
 gi|408520899|gb|EKK20921.1| Recombination inhibitory protein MutS2 [Lactobacillus florum 2F]
          Length = 785

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 202/698 (28%), Positives = 331/698 (47%), Gaps = 82/698 (11%)

Query: 72  LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCN-FLTELEEK-----IGFCIDCKLL 125
           L AV+   K+L   A L+G  L ++S +L+ ++  N F TELE         + ++ +L+
Sbjct: 68  LVAVDQPLKRLEIGANLNGKELAQFSQILQTVQRINQFFTELESDHVELLTLYSLNEQLV 127

Query: 126 II-----------------LDRASEDLELIRAERKRNMENLDSLLKKVAAQIF--QAGGI 166
            +                 LD AS+ L+ +R + ++    + +   K+   I   +A  +
Sbjct: 128 ALPELNQRLLQSVDATGWLLDTASQQLQQLRHQIEQTQATIKT---KMNGYIHGKRAKYL 184

Query: 167 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 226
              +IT R  R  + +KA  K     GI  + S+SG T ++EP+  VE NN       + 
Sbjct: 185 SDTVITIRDDRYVIPVKAEAKQQF-GGIVHDQSASGQTLYVEPQAVVELNNQLRFQQKAA 243

Query: 227 IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
           + EE  IL+ L+ E+      +     ++  +DL  A+A +A+++    P LS ++ V  
Sbjct: 244 LQEEKRILAELSDELRPEGAHLAANATQLGHLDLINAKARYARFLHATKPKLSIRNEVHL 303

Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
            ++      +HPL+      SL     NS                           I++ 
Sbjct: 304 KTA------RHPLI------SLDRVVGNS---------------------------IELN 324

Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
            +C  R ++ITGPNTGGKT +MKTLGL  LM+++GL++ A    ++  FD + ADIGD Q
Sbjct: 325 QDC--RQLIITGPNTGGKTITMKTLGLLQLMAQSGLFIAADEGSQVGVFDEVFADIGDEQ 382

Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
           S+EQNLSTFS H+  I+ IL+  +  SLVLIDE+G+GTDPSEG ALA +IL  +      
Sbjct: 383 SIEQNLSTFSSHLDNIIQILQQTTARSLVLIDELGAGTDPSEGAALAMAILDAIERLHST 442

Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
            + TTHY +L          ENA+ EF  ETLRPTYR+L G  G SNAL IA+ +G   +
Sbjct: 443 VLATTHYPELKAYAYNHVATENASMEFDEETLRPTYRLLMGVPGQSNALQIARRLGLSEQ 502

Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
           I+ +A    +    E  Q     + +   + R   E   + A  L A   +L +E++D  
Sbjct: 503 IVNQATAYTD----ETDQDLNRMITELTQQTRLAHERSTQLAEKLKA-TTELQQELQDHF 557

Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 646
                +   L  +  ++  Q +   K +   V+ D   + RD       + I   +  + 
Sbjct: 558 GQFQAQREQLVNQAKREANQLVTKTKREAQAVIDDLHQKQRDLQGGVKENEIIADQGKLN 617

Query: 647 AIVE--AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
           A+ +  A R +    V + + +  T + G+ V VK+ G +   ++   G  +   VQ G 
Sbjct: 618 ALEQQPALRKN---RVLKRSKAKQTLRVGDDVLVKNYGQQ-GVLLRKLGQQNWE-VQLGI 672

Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTCTSL 742
           ++++V ++N+      ++     P  R  K     T+L
Sbjct: 673 LKMKVAESNLEKQGTRQQPAKGTPMVRRTKSAAVPTTL 710


>gi|430758681|ref|YP_007208637.1| DNA mismatch repair protein MutSB [Bacillus subtilis subsp.
           subtilis str. BSP1]
 gi|430023201|gb|AGA23807.1| DNA mismatch repair protein MutSB [Bacillus subtilis subsp.
           subtilis str. BSP1]
          Length = 785

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 211/700 (30%), Positives = 346/700 (49%), Gaps = 76/700 (10%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
           DI G L  A  G +LSPSE   +   L AV  +   +T+ AE DG  +    PL+ +  +
Sbjct: 70  DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124

Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
               L++LE  I  CID    + LD ASE L  IR + +    R  + L+S+L+  +A  
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183

Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
                +   ++T R  R  + +K  ++     GI  + SSSGAT F+EP+  V+ NN   
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238

Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
           +    E  E   IL +LT + A+   E+ +L  +VL+ +D  FA+A +A+ +    PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297

Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
                     I ++  +HPLL                P    V N               
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320

Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
               DI++  +   +VITGPNTGGKT ++KTLGL +LM+++GL++PA        F+ + 
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376

Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
           ADIGD QS+EQ+LSTFS H+  IV ILE V+  SLVL DE+G+GTDP EG ALA SIL  
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436

Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
           +       + TTHY +L           NA+ EF +ETL PTY++L G  G SNA  I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496

Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
            +G    II +A+  +       + +    +  SL + +++ E +     S+  E   L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551

Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 639
           +E++ +  +L+ +   +  +  QQ  +++  A  + + ++ +  +   +  + + + LI 
Sbjct: 552 KELQQQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRSIKEEHKSFKDHELIN 611

Query: 640 ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
            ++  +   + A          +T    F P  G++V V + G K  T++E  G ++   
Sbjct: 612 -AKKRLEGAMPAFEKSKKPEKPKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN- 666

Query: 700 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTC 739
           VQ G ++++VK+ ++  I ++       P P+  K +   
Sbjct: 667 VQIGILKMKVKEKDLEFIKSA-------PEPKKEKMITAV 699


>gi|423082167|ref|ZP_17070762.1| MutS2 family protein [Clostridium difficile 002-P50-2011]
 gi|423085790|ref|ZP_17074229.1| MutS2 family protein [Clostridium difficile 050-P50-2011]
 gi|357548912|gb|EHJ30766.1| MutS2 family protein [Clostridium difficile 050-P50-2011]
 gi|357549417|gb|EHJ31264.1| MutS2 family protein [Clostridium difficile 002-P50-2011]
          Length = 792

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 201/697 (28%), Positives = 342/697 (49%), Gaps = 66/697 (9%)

Query: 19  ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
           E + +L +TS A +++ +   + L  I DI   +  A  G  L P  +  +  TLR    
Sbjct: 42  EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101

Query: 78  VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
           +   L+ + E D +      P+++ L N  ++  ++E++I   I  ++ I  D AS  L 
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            IR    +  +++ S L  + +       +   +I+ R  R  V +KA ++  +  GI  
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKAEYRSQVA-GIVH 214

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + SSSGAT F+EP   VE NN   +L   E  E   ILS L+A + +   ++    + + 
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
            +D AF++   +  M G+ P L+       D  +NI+  +HPLL                
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                 +  ++   ++  G  DF              +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+++GL++P      +  +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPVDYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA ++L+ +       + TTHY++L       +  ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIE 473

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
           TL PTY++L G  G SNA  I++ +G    +I RA++ +  E +  E       ++ Q++
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYINTENIALE-------DVLQNV 526

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
            + R K       A  L  EI  L  E +++ + L  +   +  K   +    +  AK +
Sbjct: 527 EKNRIKAVEDREEAERLKEEIERLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEE 586

Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTP 670
           +D ++++  +  ++ ++ E N  I+E    + + + + +P         VS        P
Sbjct: 587 VDIIIKELRSLEQERASKEKNRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP 646

Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
             GE+V V +L     +VV V       +VQ G M++
Sbjct: 647 --GEEVKVITLNQN-GSVVSVDKKRKEAVVQIGIMKM 680


>gi|429762236|ref|ZP_19294636.1| MutS2 family protein [Anaerostipes hadrus DSM 3319]
 gi|429182050|gb|EKY23175.1| MutS2 family protein [Anaerostipes hadrus DSM 3319]
          Length = 800

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 207/701 (29%), Positives = 329/701 (46%), Gaps = 110/701 (15%)

Query: 60  LSPSEICAVRRTLRAVNN-VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
           L   E+  + R L +V N V   +    +L+ DSL       EL ++   L +L  +I  
Sbjct: 84  LGTGELLDIARVLESVKNAVSYGVRMEDDLEADSLD------ELFESLVPLDDLLHEIRR 137

Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
           CI  +  I  D AS  L+ IR   K+  + + + L  + +       +   ++T R  R 
Sbjct: 138 CIISEEEIS-DDASSTLKHIRRAMKQTNQKIHTQLTTLVSSASNQDKLQDAIVTMRNGRY 196

Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
           C+ +K  ++     G+  + S+SG T F+EP   V  NN    L   E +E   ILS+L+
Sbjct: 197 CIPVKQEYRSSFQ-GMIHDQSASGNTLFIEPMSVVTLNNELKELEGKEQSEIEHILSILS 255

Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
            + +    ++ +    ++ +D  FA+A +A+ +D   PI         D  INI+   HP
Sbjct: 256 EQASYGVDDLAHNQKTLVLLDFIFAKAKYAKDIDASKPIFRE------DGIINIKQGCHP 309

Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
           LL    +                                   VPI++ +  +  ++++TG
Sbjct: 310 LLDRKKV-----------------------------------VPINVSLGKDFSMLIVTG 334

Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
           PNTGGKT S+KT+GL SLM +AGL++PA     L  F  I ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTVSLKTVGLLSLMGQAGLHIPAFQGSSLGIFREIFADIGDEQSIEQNLSTFSSH 394

Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
           ++ IV I++   R+SLVL+DE+  GTDP EG ALA SIL  L  R    + TTHY++L  
Sbjct: 395 MTNIVSIVQQAHRDSLVLLDELCGGTDPIEGAALAISILSDLHGRGIKTMATTHYSELKM 454

Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
                   ENA+ EF +ETL PTYR++ G  G SNA  I++ +G D  II+ A   ++  
Sbjct: 455 FALSTDDIENASCEFDVETLSPTYRLMIGIPGKSNAFAISRKLGLDEHIIEGAADQIDES 514

Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
             +         +++++ +   LE   +T      EI++  +EIE   K L  R  ++K 
Sbjct: 515 VKD---------FETILAD---LEKSKQTIEKEQEEILEYRKEIETLRKSLKSRQDNIKE 562

Query: 599 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA-IAAIVEAHRPD-- 655
           K  + ++     A+ +   ++ + + ++ D++  E N L K++++      +E  R D  
Sbjct: 563 KRDKMLRD----AREEAHNIISEAK-EIADSTIREYNKLKKQNKNPDTNKKMEHMRSDLR 617

Query: 656 ------------------------DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 691
                                   +DF V            G++V+V SL     TV  +
Sbjct: 618 GRMTKLEGQMAYKSKKKNKKRHEANDFHV------------GDEVYVTSLS-LAGTVSTL 664

Query: 692 PGDDDTVLVQYGKMR--VRVKKNNI-RPIPNSKRKNAANPA 729
           P     + VQ G MR  V +K   I +   + KR+N  N +
Sbjct: 665 PNAKGDLYVQMGMMRSLVNIKDLEITKTAKDVKRENQRNES 705


>gi|114566635|ref|YP_753789.1| recombination and DNA strand exchange inhibitor protein
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
 gi|114337570|gb|ABI68418.1| recombination and DNA strand exchange inhibitor protein
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 782

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 199/707 (28%), Positives = 341/707 (48%), Gaps = 89/707 (12%)

Query: 24  LNQTSAAL-AMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           L++T  A+ AM  S+P  L  ++ +   L     G +LSP+ +  +   L +   V +KL
Sbjct: 49  LDETGEAMEAMRFSEPAFLYGLKLVDSQLAKVKVGGILSPAGLREIYHILNSSRQV-QKL 107

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE- 141
             A         +Y  L  L      +  LE +I   +  +  +  D AS +L+ +R + 
Sbjct: 108 FAAG--------KYPRLFYLSSKIAEVKGLENEINNAVSEEAEL-KDDASPELKSLRGQI 158

Query: 142 ---RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
              R R    L   ++    Q +    +   L+T+R  R  V I+   ++ +  GI  + 
Sbjct: 159 NTLRLRIRNYLQEFIRSPDTQKW----LQDSLVTEREGRYVVPIRQEFRHEV-RGIIHDE 213

Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
           S+SGAT F+EP   VE NN    L   E  E   IL  L+  + +   EI    + + E 
Sbjct: 214 SASGATVFIEPAAVVENNNRIRALQREEKREVERILRKLSEAVGQYRVEIAGNQEILSEF 273

Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI------KHPLLLGSSLRSLSAAS 312
           D  +ARA  A   D   P             IN  GI      +HPLL            
Sbjct: 274 DFIYARARLAYQGDYYRP------------EINARGILEISRGRHPLL------------ 309

Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
                                       VP+DI++  +  V+VITGPNTGGKT ++KT+G
Sbjct: 310 ------------------------GQDAVPLDIRLGSDFDVLVITGPNTGGKTVALKTVG 345

Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
           L +LM+ +GL++PA+ + R+  F  +  DIGD QS+EQ+LSTFS H++ I+ ILE   +E
Sbjct: 346 LLTLMALSGLFIPARENSRISVFKKLFVDIGDEQSIEQSLSTFSSHMTNIIAILEKADKE 405

Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
           SLVL+DE+G+GTDP+EG ALA  IL+ L  +    ++TTH ++L     +  R +NA+ E
Sbjct: 406 SLVLMDEVGAGTDPAEGAALARVILEELMRKCSRVILTTHQSELKYFAYQRERVKNASVE 465

Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
           F+  +L+PTY++  G  G SNAL IA  +G   +++Q+A++L+      R++     + +
Sbjct: 466 FNPVSLQPTYKLSIGMPGQSNALEIASRLGLKTELVQQARQLL-----PRREMEIGNMIR 520

Query: 553 SLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAK 612
            L E + ++E   +    L AE+ +  + +E + +  ++    +  K   + ++ L   K
Sbjct: 521 HLKESQSQVEKSQQEVEKLLAELRENKQSLEQDRESFEQEKTEVMEKSRLEAERYLREIK 580

Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP---DDDFSVSETNTSSFT 669
            + +T +++F+  +++         ++++   I  I +   P   + D+ V+     +  
Sbjct: 581 REANTAIEEFKELMKEKEKPPKWHEVEQARQKIRQI-KVDFPGEIEKDYGVNPPKIKA-- 637

Query: 670 PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
              G+ V ++++  K   VVE P +   V+VQ G +++ V +  + P
Sbjct: 638 ---GDYVTIRNIKQK-GYVVEGPNNQGEVVVQVGILKLNVNQEQLSP 680


>gi|16079910|ref|NP_390736.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221310799|ref|ZP_03592646.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221315124|ref|ZP_03596929.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221320042|ref|ZP_03601336.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221324324|ref|ZP_03605618.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. subtilis str. SMY]
 gi|402777014|ref|YP_006630958.1| DNA mismatch repair enzyme [Bacillus subtilis QB928]
 gi|418031956|ref|ZP_12670439.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. subtilis str. SC-8]
 gi|452915656|ref|ZP_21964282.1| mutS2 family protein [Bacillus subtilis MB73/2]
 gi|3914084|sp|P94545.2|MUTS2_BACSU RecName: Full=MutS2 protein
 gi|1770036|emb|CAA99569.1| hypothetical protein [Bacillus subtilis]
 gi|2635323|emb|CAB14818.1| putative DNA mismatch repair enzyme [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|351470819|gb|EHA30940.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. subtilis str. SC-8]
 gi|402482194|gb|AFQ58703.1| Putative DNA mismatch repair enzyme [Bacillus subtilis QB928]
 gi|407960866|dbj|BAM54106.1| recombination and DNA strand exchange inhibitorprotein [Bacillus
           subtilis BEST7613]
 gi|407965696|dbj|BAM58935.1| recombination and DNA strand exchangeinhibitorprotein [Bacillus
           subtilis BEST7003]
 gi|452116004|gb|EME06400.1| mutS2 family protein [Bacillus subtilis MB73/2]
          Length = 785

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 211/700 (30%), Positives = 345/700 (49%), Gaps = 76/700 (10%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
           DI G L  A  G +LSPSE   +   L AV  +   +T+ AE DG  +    PL+ +  +
Sbjct: 70  DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124

Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
               L++LE  I  CID    + LD ASE L  IR + +    R  + L+S+L+  +A  
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183

Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
                +   ++T R  R  + +K  ++     GI  + SSSGAT F+EP+  V+ NN   
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238

Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
           +    E  E   IL +LT + A+   E+ +L  +VL+ +D  FA+A +A+ +    PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297

Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
                     I ++  +HPLL                P    V N               
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320

Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
               DI++  +   +VITGPNTGGKT ++KTLGL +LM+++GL++PA        F+ + 
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376

Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
           ADIGD QS+EQ+LSTFS H+  IV ILE V+  SLVL DE+G+GTDP EG ALA SIL  
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436

Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
           +       + TTHY +L           NA+ EF +ETL PTY++L G  G SNA  I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496

Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
            +G    II +A+  +       + +    +  SL + +++ E +     S+  E   L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551

Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 639
           +E++ +  +L+ +   +  +  QQ  +++  A  + + ++ +      +  + + + LI 
Sbjct: 552 KELQQQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRTIKEEHKSFKDHELIN 611

Query: 640 ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
            ++  +   + A          +T    F P  G++V V + G K  T++E  G ++   
Sbjct: 612 -AKKRLEGAMPAFEKSKKPEKPKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN- 666

Query: 700 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTC 739
           VQ G ++++VK+ ++  I ++       P P+  K +   
Sbjct: 667 VQIGILKMKVKEKDLEFIKSA-------PEPKKEKMITAV 699


>gi|188589227|ref|YP_001921019.1| DNA mismatch repair protein [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188499508|gb|ACD52644.1| DNA mismatch repair protein [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 635

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 186/634 (29%), Positives = 313/634 (49%), Gaps = 89/634 (14%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQL 59
           +G  ++ K  IP   +L++  ++LN+TS    ++  S  + L  I DI  +LN    G +
Sbjct: 26  LGKNLIDKI-IP-STNLKQVNRMLNETSEGRKLIDASYHMPLEGIFDINPLLNKMEKGAV 83

Query: 60  LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIGF 118
           L PSE+  +   LR    V   + +         Q Y+P L    +N   L  +E++I  
Sbjct: 84  LEPSELVTIGDFLRGCRKVKLFIKDK--------QGYAPTLSSYGENITELQYVEDEISM 135

Query: 119 CIDCKLLIILDRASEDLELIR-----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITK 173
            I  K  +I   A+++L+ IR      E K N E L+  +K  + + +    + +  +++
Sbjct: 136 SI--KGTVIDSNATKELKKIRKHIDLCEGKIN-EKLEKFIKSQSNREY----LQEAFVSQ 188

Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
           R  R  V IKAS+K  +   I + VSS G T FMEP    ++      L   E  EE  I
Sbjct: 189 RNGRYTVPIKASYKNQVSGSI-VEVSSKGNTVFMEPNIISKYTVELASLRGEESIEEYKI 247

Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
           L+ LT  I    RE+K  ++ + E D+  A+A +++ + GV P L+++        INI 
Sbjct: 248 LATLTEMIFSRIRELKVNVEVISEYDMILAKAKYSKDIKGVKPKLNNRGF------INIV 301

Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
             ++PL+  S                                     +P+++K+  + R 
Sbjct: 302 DGRYPLIKNS-------------------------------------IPLNLKIGEKYRS 324

Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
           ++ITGPN GGKT  +KT+G+ ++  ++G ++ A  +  +  FD I  DIGD QS+E +LS
Sbjct: 325 LIITGPNAGGKTVVLKTVGILTMAIQSGFHISANENSEMAVFDNIFVDIGDDQSVENSLS 384

Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
           TFS H+  +  IL   ++ +L+L DEIGSGT+P+EG ALA +IL+    +  + V +THY
Sbjct: 385 TFSSHVGNLSRILRESTKNTLLLFDEIGSGTEPNEGAALAIAILEEFYKKGCITVASTHY 444

Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
            ++         FENAA EF  +TL P YR+  G +G+SNAL IAK +G D  II R+++
Sbjct: 445 GEIKNFSYNHPHFENAAMEFKKDTLEPMYRLNIGMSGESNALYIAKKMGIDDVIIDRSKR 504

Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY-REIEDEAKDLDRR 592
                       +  E    +++ R+ L+++     S++  I++ Y   I D+   LD++
Sbjct: 505 YF----------KSKEYNYEIIDSRKLLKNKTENENSVYENIINEYDYRIGDKVLLLDKK 554

Query: 593 AAHLKAKETQQVQQ----------ELNFAKVQID 616
            + L  K   +             E+NF +++++
Sbjct: 555 VSALVYKTKDRFNNVVVFLNNEFVEVNFKRLKLE 588


>gi|297583686|ref|YP_003699466.1| MutS2 family protein [Bacillus selenitireducens MLS10]
 gi|297142143|gb|ADH98900.1| MutS2 family protein [Bacillus selenitireducens MLS10]
          Length = 786

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 210/695 (30%), Positives = 338/695 (48%), Gaps = 85/695 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  ++DI   +  A  G  L+  E+  +  T+ A +  ++   E   L  D ++    L 
Sbjct: 65  LGGLKDIKASIKRAEIGAQLNEGELLDIASTIYA-SRRFRSFIEG--LVEDEIE-LVILP 120

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
           E+ ++   LT+LE +I   ID    + LD AS  L  IR +  R++E+  S+  K+    
Sbjct: 121 EMTRSMTPLTDLEHEIKQAIDENGHV-LDSASPALRQIR-QSIRSLES--SVRSKLENTT 176

Query: 161 FQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
             + G   +   ++T R  R  + +KA ++     GI  + S+SG T F+EP+ AV  NN
Sbjct: 177 RSSSGRKMLSDAIVTIRNDRYVIPVKAEYRNHF-GGIVHDQSASGQTLFVEPEFAVTTNN 235

Query: 218 MEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
              +L  ++  EET I   L  L+  +++   E+  ++D + E+D  FA+A +   +   
Sbjct: 236 ---QLREAKAKEETEIQRILFELSGSVSEVTGELAVILDVMTEVDFMFAKAYYGASIKAT 292

Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
            P L +      D S ++   +HPL+                P                 
Sbjct: 293 EPKLDT------DGSFDLRKARHPLI----------------P----------------- 313

Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
              D  VPID+ +      +VITGPNTGGKT ++KT+G+ +LM+++GL +P +       
Sbjct: 314 --EDEIVPIDVSLGDAYSSLVITGPNTGGKTVTLKTVGMLTLMAQSGLQIPVQEGSTAGI 371

Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
           +  I ADIGD QS+EQ+LSTFS H++ IV+I++ V  ESLVL DE+G+GTDP+EG ALA 
Sbjct: 372 YQKIFADIGDEQSIEQSLSTFSSHMTNIVNIMDNVDHESLVLFDELGAGTDPTEGAALAI 431

Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
           +IL  +R      + TTHY++L           NA+ EF +ETLRPTYR+L G  G SNA
Sbjct: 432 AILDRVRSIGAKVIATTHYSELKGYAYNREGVINASVEFDVETLRPTYRLLIGIPGRSNA 491

Query: 515 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RT 567
             I+K +G    II+ A      L      ++  ++  SL + R+  E          + 
Sbjct: 492 FAISKRLGLGDDIIEEAG-----LHVTADSNKMEKMISSLEDSRKAAEKDYDEADALLQE 546

Query: 568 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 627
           A +LHAE+ +    IE E + +  RA     K  ++  +E  F   ++   +Q     ++
Sbjct: 547 AEALHAELAEELERIEVEKERIFERAEEKANKAVEKAMEEAEFIIAELRE-MQANAPSIK 605

Query: 628 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 687
           D    +    +++SE  +    +         V      +  P  G++V V SL  K   
Sbjct: 606 DHKLIDAKKRLEDSEVTLKKKKKTSPVKKKKPV-----DTLLP--GDEVKVVSLNQK-GH 657

Query: 688 VVEVPGDDDTVLVQYGKMRVRVKKNNI----RPIP 718
           +VE  G  D  +VQ G M+++VKK+++    RP P
Sbjct: 658 IVEASGKTD-YMVQLGMMKMKVKKDDLLYIDRPKP 691


>gi|402816098|ref|ZP_10865689.1| protein MutS2 [Paenibacillus alvei DSM 29]
 gi|402506002|gb|EJW16526.1| protein MutS2 [Paenibacillus alvei DSM 29]
          Length = 787

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 220/737 (29%), Positives = 366/737 (49%), Gaps = 136/737 (18%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           LEE ++ L  T  A+ + + +     S + DI   +  A    +LS +E+  +   + A 
Sbjct: 40  LEEVKRRLQATDEAMTIDRLKGGAPFSGVADIRPAVKRARINAMLSANELWEISVLIFAG 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSP---LLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
             V + +        +S+   +P   ++EL  + ++  ELE++I  CID +  + LD+AS
Sbjct: 100 RRVRRHI--------ESVHEDNPVPLMMELADSLSWQKELEDEIRRCIDEQGEV-LDQAS 150

Query: 133 EDLELIRAERK----RNMENLDSLLKKV-AAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
            +L   R E +    R  E L+S+++   A+++ Q     + LIT R  R  + +K+ ++
Sbjct: 151 SELAAARRELRIGEARIREKLESMIRSSNASKMLQ-----EQLITIRNDRYVIPVKSEYR 205

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
                GI  + SSSGAT F+EP+  V  NN   +L  +++ EE  I  +L+        +
Sbjct: 206 GHY-GGIVHDQSSSGATLFIEPEAIVTLNN---KLRETKLKEEREIERILSQLTEHVGLQ 261

Query: 248 IKYLM---DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
           +  L+   D + ++D  FA+A  A  M    P ++ + ++       I+G +HPL+    
Sbjct: 262 VDLLLNDTDIMEQLDFIFAKARLAHEMKATLPRMNDRGYMKL-----IKG-RHPLI---- 311

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                           D E                 VPID+++  +   +++TGPNTGGK
Sbjct: 312 ----------------DREKV---------------VPIDVELGNDYTSIIVTGPNTGGK 340

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T S+KT+GL SLMS +GL++PA++  ++  FD I ADIGD QS+EQ+LSTFS H++ I+ 
Sbjct: 341 TVSLKTMGLLSLMSMSGLFIPAQDGSQMCVFDAIYADIGDEQSIEQSLSTFSSHLTNIIR 400

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKD 483
           IL  ++ +SLVL+DE+G+GTDP+EG ALA +IL+++  R+G  +V TTHY++L     + 
Sbjct: 401 ILGEMTPKSLVLLDELGAGTDPAEGSALAIAILEHIH-RLGCRIVATTHYSELKAYAYER 459

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
               NA+ EF ++TLRPTYR+L G  G SNA  IA+ +G    II+ A+  V       +
Sbjct: 460 KGVINASMEFDVQTLRPTYRLLVGVPGRSNAFAIAERLGLPSSIIEHARGEV-----TEE 514

Query: 544 QHRKSELYQSLMEER-------------RKLESQARTA-----ASLHAEIMDLYREIEDE 585
             R   +  SL E R             RK     R       A LHAE         +E
Sbjct: 515 DMRIETMIASLEENRLRAEAEREEAERIRKETEHLRAVLASEEAKLHAERDKRIERASEE 574

Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 645
           A+++ R+A H                  + D ++     +L+  + + +N  +KE     
Sbjct: 575 AREIVRKARH------------------EADDII----TELKLLAQEGVN--VKEH---- 606

Query: 646 AAIVEAHRPDDDFSVSETNTSSFTP--------QFGEQVHVKSLGDKLATVVEVPGDDDT 697
             + EA +  D+ + +    S   P        + G+ V V SL  K  +VVE+ G++  
Sbjct: 607 -LLTEARKRLDEAAPASKLASKAKPAKKQARKIEAGDDVMVYSLNQK-GSVVELAGNE-- 662

Query: 698 VLVQYGKMRVRVKKNNI 714
            +VQ G M+++V  +++
Sbjct: 663 AVVQLGIMKMKVPMDDL 679


>gi|255099823|ref|ZP_05328800.1| putative DNA mismatch repair protein [Clostridium difficile
           QCD-63q42]
 gi|255305708|ref|ZP_05349880.1| putative DNA mismatch repair protein [Clostridium difficile ATCC
           43255]
          Length = 792

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 201/697 (28%), Positives = 342/697 (49%), Gaps = 66/697 (9%)

Query: 19  ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
           E + +L +TS A +++ +   + L  I DI   +  A  G  L P  +  +  TLR    
Sbjct: 42  EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101

Query: 78  VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
           +   L+ + E D +      P+++ L N  ++  ++E++I   I  ++ I  D AS  L 
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
            IR    +  +++ S L  + +       +   +I+ R  R  V +K+ ++  +  GI  
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVH 214

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + SSSGAT F+EP   VE NN   +L   E  E   ILS L+A + +   ++    + + 
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
            +D AF++   +  M G+ P L+       D  +NI+  +HPLL                
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                 +  ++   ++  G  DF              +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M+++GL++PA     +  +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DE+G+GTDP EG ALA ++L+ +       + TTHY++L          ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKPGVENAAVEFDIE 473

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
           TL PTY++L G  G SNA  I++ +G    +I RA++ +  E +  E       ++ Q++
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYINTENIALE-------DVLQNV 526

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
            + R K       A  L  EI  L  E +++ + L  +   +  K   +    +  AK +
Sbjct: 527 EKNRIKAVEDREEAERLKEEIEKLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEE 586

Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTP 670
           +D ++++  +  ++ ++ E N  I+E    + + + + +P         VS        P
Sbjct: 587 VDIIIKELRSLEQERASKEKNRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP 646

Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
             GE+V V +L     +VV V       +VQ G M++
Sbjct: 647 --GEEVKVITLNQN-GSVVSVDKKRKEAVVQIGIMKM 680


>gi|331002566|ref|ZP_08326082.1| hypothetical protein HMPREF0491_00944 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330408294|gb|EGG87770.1| hypothetical protein HMPREF0491_00944 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 785

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 219/714 (30%), Positives = 341/714 (47%), Gaps = 94/714 (13%)

Query: 19  ESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
           E QK  + T+AAL  ++ +  L LS ++DI+  L     G LLS  E+  +   L A + 
Sbjct: 42  EIQKNQSHTTAALDRIRLKGSLSLSEVKDISDSLKRLEIGSLLSQPELMKILSILNAASK 101

Query: 78  VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
                    E D D L+ Y   L+ +K      +L++++  CI  +  I+ D AS +L  
Sbjct: 102 AISYGLHFDEEDYDILEEYFSALDEIK------DLKKELSRCIISEE-IMADNASPELSH 154

Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAG--GIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
           IR    R ++ ++S +      I  A    +   +IT+R    C+ IK+ +K  +  G+ 
Sbjct: 155 IR----RKIKQINSKMHTELNNILNAHREYLMDAVITQRDGAYCLPIKSEYKNKVS-GVI 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL---SLLTAEIAKSEREIKYLM 252
            + S++G+T F+EP   ++ NN    L   E  E   IL   SLL+A+  +  R+     
Sbjct: 210 HDQSATGSTVFIEPIAVIKMNNELKSLFMDEKKEIEKILENLSLLSAQYIEPLRQN---A 266

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
             ++ +D  +A+A  ++ M+   P  +S+ +      INI+  +HPLL    +       
Sbjct: 267 KTLIFLDFVYAKANLSKKMNASEPKFNSKHY------INIKEGRHPLLDTKKV------- 313

Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
                                       VPI+I +     +++ITGPNTGGKT S+KT+G
Sbjct: 314 ----------------------------VPINISIGDNYDLLIITGPNTGGKTVSLKTVG 345

Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
           L +LM ++GL++PA     L  FD + ADIGD QS+EQ+LSTFSGH+  IV IL      
Sbjct: 346 LFTLMGQSGLHIPAFEGSELSVFDNVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADAN 405

Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
           SL L DE+ +GTDP+EG ALA SIL +L       + TTHY++L      +   ENA+ E
Sbjct: 406 SLCLFDELCAGTDPTEGAALAISILSFLHRMKSRCIATTHYSELKVFALNEPGVENASCE 465

Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPE 541
           F + TL PTYRIL G  G SNA  IA  +G    II  A           + L+ RL  +
Sbjct: 466 FDVATLSPTYRILIGVPGKSNAFAIAGKLGLPDYIISEADTHLEKDAKDFEDLLTRLEND 525

Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
           RQ   K +L  S+ + +R++ES  R        +     +I DEA++  R+    +AKET
Sbjct: 526 RQIIEKDKL--SIQKYKREIESLKRHYDKQEENLALRKEKILDEAREAARKLLE-EAKET 582

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSV 660
                         DT+    +N  + AS   + S ++E  + +  +I +  R  +    
Sbjct: 583 AD------------DTI----KNINKIASGAGLGSALEEQRTRLRESINKNTRTMEIAQP 626

Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
           S+        + G+ VHV SL      V  +P       VQ G +R +V  +++
Sbjct: 627 SKKVKKPKELKLGDSVHVISLNLD-GIVSSLPNQSGNFFVQMGILRSQVNISDV 679


>gi|404328575|ref|ZP_10969023.1| recombination and DNA strand exchange inhibitor protein
           [Sporolactobacillus vineae DSM 21990 = SL153]
          Length = 786

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 212/736 (28%), Positives = 349/736 (47%), Gaps = 98/736 (13%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           Q+   ++LE  + L  +T     +++ +  +    I DI   L     G +L   E+  +
Sbjct: 33  QLQPAETLEAVRNLQEETDEGATVLRLKGSIPFGGITDIRPALKRTKIGSMLLAKELIDI 92

Query: 69  RRTLRAV---NNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKL 124
             T+R +    +    L E  ELD        P+L  L+++      LE +I   ID + 
Sbjct: 93  ADTIRGIRLMKSFILDLAEDQELD-------LPILTGLVEHMTVPGGLEREIRSAIDDQG 145

Query: 125 LIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGI 182
            + +D AS  L  IR +    +   DS +K+    I  + G  + + +IT R  R  + +
Sbjct: 146 GV-MDSASTTLRHIRGQ----IRTFDSRVKQKLENIVHSSGKMLSEAIITIRNDRQVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL---TA 239
           K  ++     GI  + S+SGAT F+EP+  V+ NN        E  E   IL +L   TA
Sbjct: 201 KQEYRGAF-GGIVHDQSASGATLFIEPQSIVDLNNQLSEARAKERHEVERILRVLSEKTA 259

Query: 240 EIAKSEREIKYLMDRVL---EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
           E A        L+D V    ++D  FA+A +   M    P L+ +        I ++  +
Sbjct: 260 EYADG------LLDSVAGLAQLDFIFAKASYGHQMKASRPRLNDRG------VIRLKRAR 307

Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
           HPL+               +P                    D  VPID+  + +T  ++I
Sbjct: 308 HPLI---------------SP--------------------DRVVPIDVLFDEQTHALII 332

Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
           TGPNTGGKT S+KT GL +LM+++GL +PA+    +  F  + ADIGD QS+EQ+LSTFS
Sbjct: 333 TGPNTGGKTVSLKTTGLLTLMAQSGLQIPAEEGSEVSVFKKVFADIGDEQSIEQSLSTFS 392

Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
            H++ IV IL  V  +SLVL DE+G+GTDP EG AL+ +IL  +  R    V TTHY++L
Sbjct: 393 SHMTNIVGILGQVDDQSLVLFDELGAGTDPQEGAALSIAILDTVYGRGATIVCTTHYSEL 452

Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
                +     NA+ EF +ETL PTYR+L G  G SNA  I+K +G   +II  A     
Sbjct: 453 KAYAYERPGVMNASVEFDVETLSPTYRLLLGIPGRSNAFEISKKLGLPEEIIDEA----- 507

Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
           RL+   + ++  ++  SL + R+  E++   A  L  +      E+  +  DL+R    +
Sbjct: 508 RLQISHETNQIDKMIASLEQNRKAAETEEENARKLKHDAQAREAELTKKLNDLERNKEQI 567

Query: 597 KAKETQQVQQELNFAKVQIDTVVQDF----------ENQLRDASADEINSLIKESESAIA 646
             +  ++ ++ +  A+ + D ++             E+QL DA    ++  +   ES  +
Sbjct: 568 LIQAKEKAERAVKKARQEADEIIAALHHYKNSGNVKEHQLIDAKT-RLSHALDALESTDS 626

Query: 647 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
             ++ HR      V +   + F  + G+ V + S G     V ++  +D   LVQ G ++
Sbjct: 627 RKIK-HR----IQVPKKMPAGF--KSGDHVRMTSFGQDGYIVDKI--NDHEYLVQAGVLK 677

Query: 707 VRVKKNNIRPIPNSKR 722
           + V+ ++++ +   K+
Sbjct: 678 MNVQDSDLKLVKEEKK 693


>gi|291530786|emb|CBK96371.1| MutS2 family protein [Eubacterium siraeum 70/3]
          Length = 793

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 186/620 (30%), Positives = 301/620 (48%), Gaps = 82/620 (13%)

Query: 129 DRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
           D AS  L  IR   +R      E LD L+K  + Q +    + + L+T R  R  V +K 
Sbjct: 144 DSASPQLAAIRRSIQRKSLAVRERLDKLIKSQSTQKY----LQESLVTMRDGRFVVPVKT 199

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE-------IAEETAILSLL 237
            +K  +  G+  + S++GAT F+EP   VE NN E+R+   E       I +E + L   
Sbjct: 200 EYKSEIS-GLVHDTSATGATLFIEPMAVVEANN-EIRVLQIEEQKEIERIIKEMSELVGS 257

Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
            AE   ++ EI      VL +++ FA+A     M  V P+++ +         N+   +H
Sbjct: 258 FAEPMINDYEI------VLTLEIYFAKANLGAKMKAVTPVITDKP------CFNLIRARH 305

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
           PL+                                     D  VPI +++  +   +++T
Sbjct: 306 PLI-----------------------------------DKDKVVPISLELGNDYSSLIVT 330

Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
           GPNTGGKT S+KT GL  LM+  G+ +PA  +  +  FD +  DIGD QS+EQ+LSTFS 
Sbjct: 331 GPNTGGKTVSLKTAGLLVLMAMCGMMIPASENSVIGMFDELYVDIGDEQSIEQSLSTFSS 390

Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
           H++ I  IL     +SL+++DE+ SGTDP EG ALA SIL   R R    + TTHY ++ 
Sbjct: 391 HMTNIARILRTADEKSLIMLDELCSGTDPVEGSALAVSILDEFRKRDCKVIATTHYQEVK 450

Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
               K    ENA+ EF ++TLRPTYR++ G  G SNA  I+  +G    II  A++LV  
Sbjct: 451 MYAIKTDNVENASCEFDIKTLRPTYRVIVGMPGKSNAFAISSKLGISSDIIDNAKELV-- 508

Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
                +  R  E+ QSL + R++LE    +AA+   +  ++  +++ E   L++     K
Sbjct: 509 ---STEDKRFEEVVQSLEKTRQELEKLKSSAAAEQKKSKEITEQLKAERDQLEKD----K 561

Query: 598 AKETQQVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
            KE Q V+ +    +   + Q D ++++ E   +   + +    +K + S I++ V A  
Sbjct: 562 EKELQDVRSKAASIIEEVRFQGDLMLEELERLRKQKESADFAQKVKGARSHISSSVNAMY 621

Query: 654 PDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
              +  + +       P   + G+ V +  L +K  T++ +P   +   VQ G M+ + K
Sbjct: 622 DTANPIMQKKIDHYVLPRPLKVGDTVRLADL-NKEGTLLRLPDSKNMCFVQVGAMKTKTK 680

Query: 711 KNNIRPIPNSKRKNAANPAP 730
             N+R +   K+++   P P
Sbjct: 681 LENLRLV-EEKKESKKQPTP 699


>gi|228999325|ref|ZP_04158905.1| hypothetical protein bmyco0003_38810 [Bacillus mycoides Rock3-17]
 gi|229006880|ref|ZP_04164512.1| hypothetical protein bmyco0002_37820 [Bacillus mycoides Rock1-4]
 gi|228754373|gb|EEM03786.1| hypothetical protein bmyco0002_37820 [Bacillus mycoides Rock1-4]
 gi|228760522|gb|EEM09488.1| hypothetical protein bmyco0003_38810 [Bacillus mycoides Rock3-17]
          Length = 786

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 215/712 (30%), Positives = 343/712 (48%), Gaps = 89/712 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + K+  E    +G  L    P+L
Sbjct: 65  LGGIFDIRPNVKRAKIGSMLSPHELLDIASTMYGSRQM-KRFIEDMVDNGVEL----PIL 119

Query: 101 E-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETYVAQIVSLYDLEKKITSCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL +LT E+A     +   ++ +  +D  FA+A +A+ +    
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVALEADTVLANVEVIANLDFIFAKAFYAKRIKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++++ +      +N+   +HPL+               +P                  
Sbjct: 294 PIVNNERY------MNLRQARHPLI---------------DP------------------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             +  VP DI +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   +  F
Sbjct: 315 --EIIVPNDIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVLDESEICVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+EQ+LSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SNA 
Sbjct: 433 ILDEVYNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
            I+K +G    +I RA+  +  +  + E    +  E  ++   E  + E   + +  LH 
Sbjct: 493 EISKRLGLSDHVIDRARNHIGTDTNKIENMIAKLEESQKNAEREWNEAEEHRKQSEKLHR 552

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
           E+     E  DE     R    LKA+  ++ ++++  AK + + ++ +   QLR A    
Sbjct: 553 ELQRQIIEFNDE-----RDERLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQLAS 604

Query: 634 I--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLAT 687
           +  + LI+     E A   +V+  R      V   NT+     + G++V V + G K   
Sbjct: 605 VKDHELIEAKSRLEGAAPELVKKQR------VKVKNTAPKQQLRAGDEVKVLTFGQKGQL 658

Query: 688 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTC 739
           + +V   D+   VQ G ++++VK++++  I          P P  +K V T 
Sbjct: 659 LKKV--SDNEWNVQIGILKMKVKESDMEYI--------NTPQPVEKKAVATV 700


>gi|340357348|ref|ZP_08679966.1| DNA mismatch repair protein MutS [Sporosarcina newyorkensis 2681]
 gi|339617796|gb|EGQ22410.1| DNA mismatch repair protein MutS [Sporosarcina newyorkensis 2681]
          Length = 785

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 219/739 (29%), Positives = 352/739 (47%), Gaps = 84/739 (11%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           Q+   + LE+ Q+LL +T   LA+++ +  + +  I DI      A  G +LS  E+  +
Sbjct: 33  QLTPSRELEDVQRLLEETDEGLALLRIRGNVPMGGIHDIRPHAKRAQIGGMLSAMELVEI 92

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
             T+RA + + ++  EA   +G+       L+   +    LT +E +I   ID    ++ 
Sbjct: 93  ADTIRA-SRILRQFLEAVTAEGEI--NIPHLIARKEAMPILTGVEHEINAAIDDNGRVV- 148

Query: 129 DRASEDLELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
           D AS  L  IR     +  R  E L+S  + K AA++     +   ++T R  R  + +K
Sbjct: 149 DSASSALRSIRQSLRVQESRVRERLESYTRGKNAAKM-----LSDAIVTIRNDRYVIPVK 203

Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEIA 242
           A ++     G+  ++SSSG T F+EP   V+ NN E+R L   E  E   IL  L+A + 
Sbjct: 204 AEYRSHY-GGVIHDMSSSGQTLFIEPDAVVQANN-EIRSLKVKEQEEIEKILLALSASVR 261

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           +   ++  L+  + EID+  A+A +        P       V+ D  + +   +HPLL  
Sbjct: 262 EVAHDLFTLVQLLAEIDVILAKAKYGTANKCTKPA------VNADGYMRLTKARHPLL-- 313

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                         P++  V N+                   I+   +   +VITGPNTG
Sbjct: 314 --------------PIEEAVANT-------------------IEFGQDITTIVITGPNTG 340

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++KT+GL +LM+++GL +P  +   +  FD I ADIGD QS+EQ+LSTFS H+  I
Sbjct: 341 GKTVTLKTVGLCTLMAQSGLPIPVLDGSEIAVFDSIYADIGDEQSIEQSLSTFSSHMVNI 400

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           VDIL+     SL+L DE+GSGTDP EG ALA SIL  +       + TTHY +L      
Sbjct: 401 VDILKKFDDRSLLLFDELGSGTDPQEGAALAISILDEVHGSGARVMATTHYPELKAYGYN 460

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
                NA+ EF ++TL PTYR+L G  G SNA  I+K +G    II RA+      R E 
Sbjct: 461 RPGVANASVEFDIDTLSPTYRLLIGVPGRSNAFEISKRLGLHNHIIDRAKGFTGEDRGE- 519

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
                  +  SL   R + E  A     L  E   L +E+  +  + + +   L     +
Sbjct: 520 ----VDSMIASLETSRVQSEKDAERTHDLLLETEQLKKELNAKLAEFEEQKERLTEAAKE 575

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR------PDD 656
           + ++ +  AK + + V+ D      +A A      +KE E     ++EA +      P +
Sbjct: 576 RAKKIVEKAKSESEAVISDLRALRMNAGAS-----VKEHE-----LIEARKRLESATPAE 625

Query: 657 DFSVSETNTSSFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
               +    ++  P Q G++V V + G K  T+VE   D + V V+ G +++++ +  + 
Sbjct: 626 KKKKAIKAKAAPRPLQKGDEVKVLAYGQK-GTLVEKVSDKEWV-VEIGILKMKLPELGLE 683

Query: 716 PI-PNSKRKNAANPAPRLR 733
            + P  ++K   + A R R
Sbjct: 684 YVKPEKEKKQVTSAAVRGR 702


>gi|291537895|emb|CBL11006.1| Mismatch repair ATPase (MutS family) [Roseburia intestinalis XB6B4]
          Length = 639

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 170/532 (31%), Positives = 257/532 (48%), Gaps = 61/532 (11%)

Query: 91  DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
           D ++  +PL + ++ C  L+E E             I D AS  L  IR   +   + + 
Sbjct: 137 DQIEPLTPLCDEIRRC-ILSEDE-------------IADDASSTLRSIRKSMRGMNDKIR 182

Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
           + +  +         +   +IT R  R C+ +KA  K  +P G+  + SSSG+T F+EP 
Sbjct: 183 AQMNSMINNTTTRSYLQDAVITMRDGRYCLPVKAEAKSQVP-GMVHDQSSSGSTLFIEPL 241

Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
             V  NN    L   E  E   IL+ L+   A    ++    + + E+D  FA+A FAQ 
Sbjct: 242 AVVNLNNEYKALLIKEKEEIEVILANLSNLTAGYSMQLHTDYNVLTELDFIFAKAAFAQT 301

Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
            +GV P  ++      D  INI+  +HPLL    +                         
Sbjct: 302 YNGVAPTFNT------DGRINIKKGRHPLLDAKKV------------------------- 330

Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
                     VPID+++  +  +++ITGPNTGGKT S+KT+GL +LM +AGL++PA    
Sbjct: 331 ----------VPIDVRLGEDFTLLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPASERS 380

Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
            L  F+ + ADIGD QS+EQ+LSTFS H++ I  IL  V+  SLVL DE+ +GTDP+EG 
Sbjct: 381 ELGIFEEVFADIGDEQSIEQSLSTFSSHMTNITRILSQVNDRSLVLFDELCAGTDPTEGA 440

Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
           ALA SIL  L+      + TTHY++L     + +  ENA  EF +E+L PTYR+L G  G
Sbjct: 441 ALAISILSKLKLYGARVMATTHYSELKVFALQTSGVENACCEFDVESLSPTYRLLIGIPG 500

Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
            SNA  I+  +G    II+ A+      R         +L   L + R  +E +      
Sbjct: 501 KSNAFAISTKLGLGEDIIEDAKG-----RISENDMNFEDLLADLEKSRITIEKEQLEINQ 555

Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
              EI  L  ++E + + LD     +  +  +Q    +  AK   D  +++F
Sbjct: 556 YKEEIQKLKEQLEQKQERLDASRDKILREANEQAYNIIKEAKDLADETIRNF 607


>gi|294793864|ref|ZP_06759001.1| MutS2 protein [Veillonella sp. 3_1_44]
 gi|294455434|gb|EFG23806.1| MutS2 protein [Veillonella sp. 3_1_44]
          Length = 792

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 281/571 (49%), Gaps = 56/571 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           +LD AS  L  +R    +  E + + ++ +           + +IT+R +R  + +K  +
Sbjct: 141 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 200

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 243
           +    DG+  + S++G T ++EP   V  NN    L  + I EE  +L +   L+A + +
Sbjct: 201 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 256

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
              ++    ++V  I+  + +A  A    GV  ILS+      D ++N+   +HPL+   
Sbjct: 257 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 307

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                        P                    +  VP +I++    R+++ITG NTGG
Sbjct: 308 -------------P-------------------PNMVVPTNIQLGTSYRILLITGSNTGG 335

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT S+KTLGL SLM++ GL++PA +   LP F  I ADIGD QS+E +LSTFS H+++++
Sbjct: 336 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 395

Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
            I++      LVL+DE+GSGTDP EG ALA SIL++ R +  L +V+THY +L       
Sbjct: 396 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 455

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
              EN   EF   TL+PTYR+  G  G S+AL+IA  +G  + I++RA +     + +  
Sbjct: 456 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLQKDIVERATE----YKSQFG 511

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
            H   E+   L E+ RK   + R       E   +  ++E E K  +     + AK    
Sbjct: 512 SHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEKKQFNENRKQILAKAQAD 571

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
            +      +V+ + +++  + Q  + + D + S I  +   I+++   H P+        
Sbjct: 572 AESMKRSLRVEGEAIIKQLKAQFSETNKDRLQSAINAARKGISSV---HVPEAAVDDDRK 628

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 694
           + ++   + G+ V+V SL   L TV+ + G+
Sbjct: 629 SLTADAIKVGQAVYVTSL-RSLGTVLSINGN 658


>gi|229032198|ref|ZP_04188171.1| hypothetical protein bcere0028_42400 [Bacillus cereus AH1271]
 gi|228728978|gb|EEL79981.1| hypothetical protein bcere0028_42400 [Bacillus cereus AH1271]
          Length = 786

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 207/718 (28%), Positives = 346/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  + PL    I DI   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  EMQDTTDEAAKVIRLKGNAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+L   +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ   +  I    +T R  R  + +K  ++ +   G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++Q+   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIQEL-RQLRKAQLINVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|282850354|ref|ZP_06259733.1| putative recombination and DNA strand exchange inhibitor protein
           [Veillonella parvula ATCC 17745]
 gi|282579847|gb|EFB85251.1| putative recombination and DNA strand exchange inhibitor protein
           [Veillonella parvula ATCC 17745]
          Length = 812

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 177/615 (28%), Positives = 300/615 (48%), Gaps = 58/615 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           +LD AS  L  +R    +  E + + ++ +           + +IT+R +R  + +K  +
Sbjct: 161 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 220

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 243
           +    DG+  + S++G T ++EP   V  NN    L  + I EE  +L +   L+A + +
Sbjct: 221 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 276

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
              ++    ++V  I+  + +A  A    GV  ILS+      D ++++   +HPL+   
Sbjct: 277 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVSLMRARHPLI--- 327

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                        P                   ++  VP +I++    R+++ITG NTGG
Sbjct: 328 -------------P-------------------TNMVVPTNIQLGTSYRILLITGSNTGG 355

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT S+KTLGL SLM++ GL++PA +   LP F  I ADIGD QS+E +LSTFS H+++++
Sbjct: 356 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 415

Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
            I++      LVL+DE+GSGTDP EG ALA SIL++ R +  L +V+THY +L       
Sbjct: 416 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 475

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
              EN   EF   TL+PTYR+  G  G S+AL+IA  +G  + I++RA +     + +  
Sbjct: 476 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVERATE----YKSQFG 531

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
            H   E+   L E+ RK   + R       EI  +  ++E E K  + +   + AK    
Sbjct: 532 SHEMEEVLSDLNEQLRKASERERALKKELDEIRRMRGQLEKEKKQFNEKRKQILAKAQAD 591

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
            +      +V+ + +++  + Q  + + D+  S I  +   I+++     P DD   S T
Sbjct: 592 AESMKRSLRVEGEAIIKQLKAQFSETNKDKRQSAINAARKRISSVHVPEAPVDDDRKSLT 651

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 721
             +    + G+ V+V SL   L TV+ + G+   V +      V+V   ++  R   N  
Sbjct: 652 ADA---IKVGQAVYVTSL-RSLGTVLSINGNRVNVDINGLTATVKVSELQSTTREEGNKL 707

Query: 722 RKNAANPAPRLRKQV 736
            +      P+ RK++
Sbjct: 708 AREQKEAMPKTRKRM 722


>gi|449438987|ref|XP_004137269.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
          Length = 837

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 221/790 (27%), Positives = 372/790 (47%), Gaps = 142/790 (17%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ--PLDLSTI--EDIAGILNSAVSGQLLSPSEICAVRRT 71
           + EES +LL++T+AA+ M +     LDLS +    +   +  A     +  +E  A+   
Sbjct: 97  TYEESLRLLDETNAAVEMHKHGGCSLDLSGVNLHLVKSAIEHAQRSLAMDGNEAIAIAAL 156

Query: 72  LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL-IILDR 130
           L+  + +   L  A + D D   R+ PL  ++            +G  ++  L+ +IL+ 
Sbjct: 157 LQFADMLQFNLKTAIKEDVDWSTRFMPLTNVI------------MGMVVNQSLIKLILNA 204

Query: 131 ASEDLEL--------------IRAERKRNMENLDSLLK--KVAAQIFQAGGIDKPLITKR 174
             ED  +              +R   K+  + +DSL++  K      +   +D       
Sbjct: 205 VDEDGSVKDSASYALRESRDQVRKLEKKLSQLMDSLVRSAKSGTSFLEVEIVD------- 257

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAI 233
             R C  IK+    L+     L  S +G   F+EP  AV  N+ E++ + + +A+ E  +
Sbjct: 258 -GRWC--IKSEGDQLMDVKGLLLSSDAGIGSFIEPISAVPLND-ELQQARASVAKAEEDV 313

Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL--------------- 278
           L +LT ++     +I  L+  ++E+D+  ARA +     G CP L               
Sbjct: 314 LFVLTEKVKMDFEDISKLIGCIIELDVVNARASYGLSFGGTCPNLVLLEGCNSSIANVCL 373

Query: 279 ----SSQSHVSFDSSI-NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
               S  SH+  +  +  ++   HPLLL     +L  A       K DV+N+   +G   
Sbjct: 374 SGDQSEASHLKKNEWVLYLQNTHHPLLLQQYRENLKNA-------KRDVKNAFNEMGRKP 426

Query: 334 KG------------ISDF-----------PVPIDIKVECETRVVVITGPNTGGKTASMKT 370
            G            IS F           PV +D  +    +V+VITGPNTGGKT  +KT
Sbjct: 427 PGGNMSWKEKEVIDISLFKMKVDQLEQARPVSVDFSISRRIKVLVITGPNTGGKTVCLKT 486

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           +GLA++M+K+GL++ A    ++PWFD I ADIGD QSL Q+LSTFSGH+ +I DI  + +
Sbjct: 487 IGLAAMMAKSGLHVLASESVQIPWFDSIFADIGDEQSLTQSLSTFSGHLRKISDIQSVST 546

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQ-YLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
            +SLVL+DE+G+GT+P EG AL  S+L+ + +    L + TTH+ +L  LK  +  FENA
Sbjct: 547 SQSLVLLDEVGAGTNPLEGAALGMSLLESFAKSGAALTIATTHHGELKTLKYSNEVFENA 606

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERLRPER 542
             EF    L+PTY+ILWG  G SNA+NIA+ +G    ++  A++L       ++ +  + 
Sbjct: 607 CMEFDEVNLKPTYKILWGIPGRSNAINIAERLGLPSSVVDDARELYGAGSAQIDEVITDM 666

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
           +  +K   Y  L++E +   ++++   +L+ +++   R I +          H + +  +
Sbjct: 667 ECIKKK--YGDLLQEAQNNLTESK---NLYEKLLLARRNIIE----------HGRRQRLR 711

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEI------------------NSLIKESESA 644
           +VQ+  N A     T   +   + R+  A  I                  N+     +  
Sbjct: 712 KVQEVANAAT----TARSNLHQKGRELRASTIEYTSPSAIDRMQRAGINSNNRTTAGKKD 767

Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
           + A+        D S  ++    F P  G+ V+V S G K ATV+ V    D V+V+ G 
Sbjct: 768 LMALRRQISSTSDISQPQSEEPLF-PTVGDTVYVSSFGKK-ATVLGVEPSKDEVIVRVGS 825

Query: 705 MRVRVKKNNI 714
           +++++K  +I
Sbjct: 826 IKLKLKFTDI 835


>gi|402313005|ref|ZP_10831928.1| MutS2 family protein [Lachnospiraceae bacterium ICM7]
 gi|400367581|gb|EJP20597.1| MutS2 family protein [Lachnospiraceae bacterium ICM7]
          Length = 785

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 218/708 (30%), Positives = 338/708 (47%), Gaps = 101/708 (14%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
           L LS ++DI+  L     G  LS  E+  V   L A +        + E D D L+ Y  
Sbjct: 63  LALSEVKDISDSLKRLEIGSSLSQPELMKVLSILNAASKAITYGLHSEEEDYDVLEEYFR 122

Query: 99  LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
            L+ +K      +L++++  CI  +  I+ D AS +L  IR    R ++ ++S +     
Sbjct: 123 SLDEIK------DLKKELSRCIISEE-IMADNASPELSHIR----RKIKQINSKMHTELN 171

Query: 159 QIFQAG--GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
            I  A    +   +IT+R    C+ IK+ +K  +  G+  + SS+G+T F+EP   +  N
Sbjct: 172 NILNAHREYLMDAVITQRDGAYCLPIKSEYKNKV-SGVVHDQSSTGSTVFIEPIAVIRMN 230

Query: 217 NMEVRLSNSEIAEETAIL---SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
           N    L+  E  E   IL   SLL A+  +S RE       ++ +D  +A+A  ++ M+ 
Sbjct: 231 NELKSLAMDEKKEIEKILENLSLLAAQYIESLREN---AKTLIFLDFVYAKANLSKKMNA 287

Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
             P  +S+ +      INI+  +HPLL    +                            
Sbjct: 288 SEPKFNSKHY------INIKEGRHPLLDAKKV---------------------------- 313

Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
                  VPI+I +     +++ITGPNTGGKT S+KT+GL +LM ++GL++PA     L 
Sbjct: 314 -------VPINISLGEHYDLLIITGPNTGGKTVSLKTVGLFTLMGQSGLHIPAFEGSELS 366

Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
            F  + ADIGD QS+EQ+LSTFSGH+  IV IL      SL L DE+ +GTDP+EG ALA
Sbjct: 367 VFSDVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADANSLCLFDELCAGTDPTEGAALA 426

Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
            SIL +L       + TTHY++L      +   ENA+ EF + TL PTYRIL G  G SN
Sbjct: 427 ISILSFLHRMQSRCIATTHYSELKVFALNEPGVENASCEFDVATLSPTYRILIGVPGKSN 486

Query: 514 ALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEERRKLE 562
           A  IA  +G    II  A           + L+ RL  +RQ   K +L  S+ + +R++E
Sbjct: 487 AFAIAGKLGLPDYIISEADTHLEKDAKDFEDLLTRLENDRQTIEKDKL--SIQKYKREIE 544

Query: 563 SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ----IDTV 618
           S  R        +     +I +EAK+  R+    +AKET     + N  K+     + + 
Sbjct: 545 SLKRHYNKQEENLAARKEKILEEAKEAARKILE-EAKETADDTIK-NINKIASGAGLGSA 602

Query: 619 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHV 678
           +++   +LR++    IN   K +E      V+A +P +              + G+ VHV
Sbjct: 603 LEEQRTRLRES----INKNTKATEIK-QNTVKAKKPKE-------------LKLGDSVHV 644

Query: 679 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI--PNSKRKN 724
            SL      V  +P       VQ G +R +V  +++  +  P++K +N
Sbjct: 645 ISLNLD-GIVSSLPNQSGNFFVQMGILRSQVNISDVALVEEPSTKPEN 691


>gi|269798126|ref|YP_003312026.1| MutS2 family protein [Veillonella parvula DSM 2008]
 gi|269094755|gb|ACZ24746.1| MutS2 family protein [Veillonella parvula DSM 2008]
          Length = 792

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 169/571 (29%), Positives = 281/571 (49%), Gaps = 56/571 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           +LD AS  L  +R    +  E + + ++ +           + +IT+R +R  + +K  +
Sbjct: 141 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQEAIITQRNNRYVIPVKQEY 200

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 243
           +    DG+  + S++G T ++EP   V  NN    L  + I EE  +L +   L+A + +
Sbjct: 201 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 256

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
              ++    ++V  I+  + +A  A    GV  ILS+      D ++N+   +HPL+   
Sbjct: 257 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 307

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                        P                    +  VP +I++    R+++ITG NTGG
Sbjct: 308 -------------P-------------------PNMVVPTNIQLGTSYRILLITGSNTGG 335

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT S+KTLGL SLM++ GL++PA +   LP F  I ADIGD QS+E +LSTFS H+++++
Sbjct: 336 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 395

Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
            I++      LVL+DE+GSGTDP EG ALA SIL++ R +  L VV+THY +L       
Sbjct: 396 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMVVSTHYNELKNYAYHT 455

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
              EN   EF   TL+PTYR+  G  G S+AL+IA  +G  + I++RA +     + +  
Sbjct: 456 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVERATE----YKSQFG 511

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
            H   E+   L E+ RK   + R       E   +  ++E E K  + +   + +K    
Sbjct: 512 SHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEKKQFNEKRKQILSKAQAD 571

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
            +      +V+ + +++  + Q  + + D   S I  +   I+++     P DD   S T
Sbjct: 572 AESMKRSLRVEGEAIIKQLKTQFSETNKDRRQSAINAARMGISSVHVPEAPVDDERKSLT 631

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 694
             +    + G+ V+V SL   L TV+ + G+
Sbjct: 632 ADA---IKVGQAVYVTSL-RSLGTVLSINGN 658


>gi|375091463|ref|ZP_09737753.1| MutS2 family protein [Helcococcus kunzii ATCC 51366]
 gi|374563326|gb|EHR34645.1| MutS2 family protein [Helcococcus kunzii ATCC 51366]
          Length = 785

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 191/630 (30%), Positives = 309/630 (49%), Gaps = 83/630 (13%)

Query: 127 ILDRASEDLELIRAERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           I D AS+ L  IR   +   E     L+SL+K     + Q G      IT R  R  V +
Sbjct: 143 IADDASKTLFNIRKSIREKTEEARKKLNSLVKDDTTNL-QDG-----FITMRDGRYVVPV 196

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           K   K  +P GI  +VSSSG T ++EP   VE NN    L   E  E   IL  L+  I 
Sbjct: 197 KTGAKSKVP-GITHDVSSSGQTLYIEPMVIVEINNKIRDLEIEEYEEIRKILKDLSEMIF 255

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
               EI+     ++++D  FA+A +A       PIL+ +        I+I+  KHPLL G
Sbjct: 256 NYHEEIENNQYLLVDLDFTFAKAKYALEKGHTKPILNDEK------IIDIKNAKHPLLKG 309

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                                                 VPID+K+      +VITGPNTG
Sbjct: 310 K------------------------------------IVPIDVKIGENYNALVITGPNTG 333

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT S+KT+GL   M++AGL++P     ++  F+ + ADIGD+QS+EQ+LSTFS  ++ I
Sbjct: 334 GKTVSLKTVGLVVFMAQAGLFVPCDEFSKVAVFNDVFADIGDNQSIEQSLSTFSASMTNI 393

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V+IL   + +SLVL DE+G+GTDP+EG ALA +I+  L  R  + + TTHY++L      
Sbjct: 394 VNILNKANDKSLVLFDELGNGTDPTEGAALAMAIIDTLVKRESILLSTTHYSELKLYAMS 453

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
               +NA  EF +ETL PTY++  G  G SNA  I++ +G    I+  A++ + +     
Sbjct: 454 TEGVQNANVEFDIETLSPTYKLTIGRPGKSNAFEISRRLGLFEDILFDAKQYISK----- 508

Query: 543 QQHRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
            ++R  E +   + +++ +L++Q    + ++ E +   + I+D   D+ +R         
Sbjct: 509 -ENRDFEDIIAEIEDDKSRLDNQ---LSEVNKEKLRYQKLIDDFNNDVGKRR-------- 556

Query: 602 QQVQQELNFAKVQIDTVVQDFENQ----LRDASADEINSLIKESESAIAAIVEAHRPDDD 657
           ++ ++++  AK +   ++ D +N+    LR A + +  S  ++ + A + I E ++ ++ 
Sbjct: 557 EKAEKDIEKAKEEAKKILYDAKNKSKELLRIAKSQKGRSESRDIDRAYSEINEKYKEENK 616

Query: 658 F-----SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
                   +  N      + GE V V S+G +L  V  +P +   V VQ G ++  V   
Sbjct: 617 RYETKPKQTRKNNKIIDVKLGETVKVLSMGGELGVVQTLPDNKGEVTVQMGILKFTV--- 673

Query: 713 NIRPIPNSKRKNAANPAPRLRKQVCTCTSL 742
           NIR +  ++ +     +    KQV   T++
Sbjct: 674 NIRDLEKTQSEIEKEKSKSSYKQVMRNTAM 703


>gi|294791999|ref|ZP_06757147.1| MutS2 protein [Veillonella sp. 6_1_27]
 gi|294457229|gb|EFG25591.1| MutS2 protein [Veillonella sp. 6_1_27]
          Length = 792

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 281/571 (49%), Gaps = 56/571 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           +LD AS  L  +R    +  E + + ++ +           + +IT+R +R  + +K  +
Sbjct: 141 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 200

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 243
           +    DG+  + S++G T ++EP   V  NN    L  + I EE  +L +   L+A + +
Sbjct: 201 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 256

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
              ++    ++V  I+  + +A  A    GV  ILS+      D ++N+   +HPL+   
Sbjct: 257 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 307

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                        P                    +  VP +I++    R+++ITG NTGG
Sbjct: 308 -------------P-------------------PNMVVPTNIQLGTSYRILLITGSNTGG 335

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT S+KTLGL SLM++ GL++PA +   LP F  I ADIGD QS+E +LSTFS H+++++
Sbjct: 336 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 395

Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
            I++      LVL+DE+GSGTDP EG ALA SIL++ R +  L +V+THY +L       
Sbjct: 396 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 455

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
              EN   EF   TL+PTYR+  G  G S+AL+IA  +G  + I++RA +     + +  
Sbjct: 456 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVERATE----YKSQFG 511

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
            H   E+   L E+ RK   + R       E   +  ++E E K  +     + AK    
Sbjct: 512 SHEMEEVLSDLNEQLRKASERERALKKELDETGRMRGQLEKEKKQFNENRKQILAKAQAD 571

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
            +      +V+ + +++  + Q  + + D + S I  +   I+++   H P+        
Sbjct: 572 AESMKRSLRVEGEAIIKQLKAQFSETNKDRLQSAINAARKGISSV---HVPEAAVDDDRK 628

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 694
           + ++   + G+ V+V SL   L TV+ + G+
Sbjct: 629 SLTADAIKVGQAVYVTSL-RSLGTVLSINGN 658


>gi|253577240|ref|ZP_04854559.1| MutS2 family protein [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843354|gb|EES71383.1| MutS2 family protein [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 788

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 171/523 (32%), Positives = 267/523 (51%), Gaps = 61/523 (11%)

Query: 17  LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           LE+ ++LL  T  A  +  ++  P     I DI   +  A  G  L+P E+  +  TL  
Sbjct: 40  LEDVKRLLQATDEAFKVDRLKGAP-GFGGIVDITPAVKRARIGGTLNPHELLGIATTLEG 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKLLIILDRASE 133
              + + +    E      +   PLL  L +  +    LE+ I  CID +   +LD AS 
Sbjct: 99  SRRIKRYIATMHE------EHEVPLLYHLSDTLSDQKPLEDAIKRCID-ESAEVLDSASP 151

Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
           +L  IR E +    R  E LD++++  +        +   LIT R  R  + +KA ++  
Sbjct: 152 ELATIRRELRSGEVRIREKLDAMIRSASVSKM----LQDQLITIRGDRFVIPVKAEYRAH 207

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
              GI  + S SGAT F+EP+  V  NN        E  E   IL  LTA + +    + 
Sbjct: 208 F-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVGEQAELLL 266

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
           Y  D + ++D  FA+A  A+ + G  P ++ +  +           +HPL+         
Sbjct: 267 YDGDVLGQLDFIFAKARLARELKGTLPRMNDRGFIKLKKG------RHPLI--------- 311

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                  P                   +D  VPID+++  +   +++TGPNTGGKT ++K
Sbjct: 312 -------P-------------------ADQVVPIDVELGNQYTTIIVTGPNTGGKTVTLK 345

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+GL SLM+ +GL++PA++  +L  FD I ADIGD QS+EQ+LSTFS H++ I+ IL  +
Sbjct: 346 TIGLLSLMAMSGLFVPAEDGSQLCVFDAIYADIGDEQSIEQSLSTFSSHMTNIISILRQM 405

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
           + +SLVL+DE+G+GTDP+EG ALA +IL+++       V TTH+++L     +     NA
Sbjct: 406 TPKSLVLLDELGAGTDPAEGSALAIAILEHIHSLGCRMVATTHFSELKAYAYERKGVINA 465

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
           + EF + TL PTYR+L G  G SNA  IA+ +G   +I++ A+
Sbjct: 466 SMEFDVATLSPTYRLLVGIPGRSNAFAIAERLGLPERILEYAR 508


>gi|423449119|ref|ZP_17425998.1| MutS2 protein [Bacillus cereus BAG5O-1]
 gi|401128568|gb|EJQ36257.1| MutS2 protein [Bacillus cereus BAG5O-1]
          Length = 786

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 207/718 (28%), Positives = 345/718 (48%), Gaps = 85/718 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           E Q   ++ +  + +  S PL    I D+   +  A  G +LSP+E+  +  T+    N+
Sbjct: 45  ELQDTTDEAAKVIRLKGSAPL--GGITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
            K+  E    +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156

Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR +      R  E L+++ +   AQ   +  I    +T R  R  + +K  ++ +   G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I  + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            V  +D  FA+A +A+ +    PI++++ ++    +      +HPL+             
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
            + TL PTY++L G  G SNA  I+K +G   ++I +A+  +         ++   +   
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525

Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
           L E ++  E     A +L  +   L+RE++ +  + +        K  ++ ++++  AK 
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDEKLLKAQKEGEEKVEAAKK 585

Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
           + + ++ +   QLR A    +  + LI+     E A   +V+  +          N  + 
Sbjct: 586 EAEGIIHEL-RQLRKAQLVNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635

Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            P+     G++V V + G K   + +V   D    VQ G ++++VK+ N+  I   K+
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKEFNMEYINTPKQ 691


>gi|321312391|ref|YP_004204678.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis BSn5]
 gi|320018665|gb|ADV93651.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis BSn5]
          Length = 785

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 211/700 (30%), Positives = 346/700 (49%), Gaps = 76/700 (10%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
           DI G L  A  G +LSPSE   +   L AV  +   +T+ AE DG  +    PL+ +  +
Sbjct: 70  DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124

Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
               L++LE  I  CID    + LD ASE L  IR + +    R  + L+S+L+  +A  
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183

Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
                +   ++T R  R  + +K  ++     GI  + SSSGAT F+EP+  V+ NN   
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238

Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
           +    E  E   IL +LT + A+   E+ +L  +VL+ +D  FA+A +A+ +    PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297

Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
                     I ++  +HPLL                P    V N               
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320

Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
               DI++  +   +VITGPNTGGKT ++KTLGL +LM+++GL++PA        F+ + 
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376

Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
           ADIGD QS+EQ+LSTFS H+  IV ILE V+  SLVL DE+G+GTDP EG ALA SIL  
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436

Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
           +       + TTHY +L           NA+ EF +ETL PTY++L G  G SNA  I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496

Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
            +G    II +A+  +       + +    +  SL + +++ E +     S+  E   L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551

Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 639
           +E++ +  +L+ +   +  +  QQ  +++  A  + + ++ +  +   +  + + + LI 
Sbjct: 552 KELQQQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRSIKEEHKSFKDHELIN 611

Query: 640 ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
            ++  +   + A          +T    F P  G++V V + G K  T++E  G ++   
Sbjct: 612 -AKKRLEGAMPAFEKSKKPEKPKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN- 666

Query: 700 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTC 739
           VQ G ++++VK+ ++  I ++       P P+  K +   
Sbjct: 667 VQIGILKMKVKEKDLEFIKSA-------PEPKKEKIITAV 699


>gi|163846758|ref|YP_001634802.1| MutS2 family protein [Chloroflexus aurantiacus J-10-fl]
 gi|163668047|gb|ABY34413.1| MutS2 family protein [Chloroflexus aurantiacus J-10-fl]
          Length = 823

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 204/722 (28%), Positives = 339/722 (46%), Gaps = 94/722 (13%)

Query: 27  TSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEA 85
           T+ A  +++  P + +    D+   +  A  G +L  + +  +  TL++   + ++L+  
Sbjct: 56  TAEARLLLEEWPEVSIGGARDVRRAVQHAARGGILDGTTLREIAATLQSAALLRQRLSR- 114

Query: 86  AELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAERK 143
             LD    +R+  L++L      +  L E I   I  D +   +LD AS  L  +R E +
Sbjct: 115 --LD----ERFPLLIDLANTLPVIPSLSEAIDRAIGDDGQ---VLDSASPTLARLRHEVR 165

Query: 144 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
                L   L+ +      AG + +P+IT R  R  + +KASH+  +  G+  + S SGA
Sbjct: 166 VAFNRLQERLQSMIHSSALAGALQEPIITVRNGRYVIPVKASHRREV-RGLVHDQSGSGA 224

Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
           T ++EP   VE NN    L ++E  E   ILS L+ ++  +   I   ++ +  +DLAFA
Sbjct: 225 TLYIEPMAIVELNNRWRELQSAEAEEVQRILSTLSDQVGAAANLITSTVNTLATLDLAFA 284

Query: 264 RAGFAQWMDGVCPIL---SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
            A +A       P +         S +  + +   +HPLL   ++               
Sbjct: 285 LARYAIATRSTAPEIVDWRPDDPPSPEPPLRLTRARHPLLPAETV--------------- 329

Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
                               VPID+ +  E  +++ITGPNTGGKT ++KT GL +LM++A
Sbjct: 330 --------------------VPIDLWLGGEFSLLLITGPNTGGKTVALKTTGLLALMAQA 369

Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR--------- 431
           G+ +PA    RLP F  I ADIGD QS+EQ+LSTFS H++ I+ +L+ ++          
Sbjct: 370 GMQIPADQPSRLPVFQYIFADIGDEQSIEQSLSTFSSHMANIIRVLQTLTAAQQMPSESD 429

Query: 432 ----------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
                      +LVL DE+G+GTDP EG ALA +I+  L +   L + TTHYA+L     
Sbjct: 430 AYALFDDRRPAALVLFDELGAGTDPVEGAALARAIIGRLLELGVLGIATTHYAELKAFAY 489

Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
                +NA+ EF +ETL PTYR+  G  G SNAL IA  +G D  +I++A+  +     +
Sbjct: 490 TTPGVQNASVEFDIETLAPTYRLSIGIPGRSNALAIAARLGLDPTLIEQARSFI-----D 544

Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE--------IEDEAKDLDRRA 593
           R++ +  +L   +  ER    +  + A  L  +  + YR+           E       A
Sbjct: 545 RKEAQVEDLLAGIQRERDAAAAALQRAEELRLD-AERYRDRLAAEQQAFAAERAAALEAA 603

Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
                 E ++V+Q+L   + +  TV  +   Q  + +   + +  ++S+ A+A      R
Sbjct: 604 RAEIEAELREVRQQLRRLREEFRTV--NISRQWLEEAEKRLATTAEQSQQAVA------R 655

Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
            +     +    +    Q G+QV V S+G     +V +  +D T  VQ G  R+ V  N+
Sbjct: 656 LNVQTQPAPPPPAEKPLQVGDQVQVTSIGLN-GEIVAIDEEDQTATVQVGGFRMTVSFND 714

Query: 714 IR 715
           ++
Sbjct: 715 LK 716


>gi|332653476|ref|ZP_08419221.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
 gi|332518622|gb|EGJ48225.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
          Length = 789

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 217/714 (30%), Positives = 354/714 (49%), Gaps = 85/714 (11%)

Query: 17  LEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           L++ Q+   +TSAA+ M+  +  P  LS ++ +  IL+ A  G  L+  E+  V   LR 
Sbjct: 43  LDDVQRAQEETSAAVKMLVLRGSP-GLSGVKPVGAILHRADMGGSLNTRELLEVAAVLRC 101

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
                      A+  GDS ++ +P+  L         LE+ I   I  +  +  D AS +
Sbjct: 102 ART--------AKEYGDSEEK-TPISHLFHALTPNRFLEDTITNSIVGEDELA-DSASSE 151

Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
           L  IR   +     +  +L+K+ +   Q+  + + +IT R  R  V +K+ HK  +P G+
Sbjct: 152 LASIRRHMRATEAKVRDILQKLISS-NQSKYLQESIITIRSDRYVVPVKSEHKNAIP-GL 209

Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
             +VS+SG+T+F+EP G V+ NN    L   E  E   IL+ L+A+ A  + +I      
Sbjct: 210 VHDVSASGSTFFIEPMGVVKANNELRELLAKEKKEIERILAELSAQCAAHKEDILEDYQL 269

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
           ++ +D  FAR   +  M+G  P LS       D  + +   +HPLL              
Sbjct: 270 LVWLDGIFARGQLSLKMEGSQPKLS-------DKYLRLRKARHPLL-------------- 308

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
                 D + +               VP D+++      ++ITGPNTGGKT ++KT+GL 
Sbjct: 309 ------DKKKA---------------VPNDLELGDTFDTLMITGPNTGGKTVTLKTIGLI 347

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
           +LM++ GL++PA     +  FD +L+DIGD QS+ Q+LSTFS H++ IV ILE     +L
Sbjct: 348 TLMAQCGLHIPAGADSTVRIFDRVLSDIGDEQSIAQSLSTFSSHMTNIVGILEEADDRTL 407

Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
           +L+DE+G+GTDP EG ALA +I++  R        TTHYA+L          ENA+ EF+
Sbjct: 408 ILLDELGAGTDPVEGAALAAAIIESARGMGAAVAATTHYAELKVYAMTTPGVENASCEFN 467

Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
           +ETL PTYR++ G  G SNA  I++ +G    II++A       R + +  R  ++   L
Sbjct: 468 VETLAPTYRLILGIPGKSNAFAISRRLGLPEYIIEKAAA-----RLDAENVRFEDVLTRL 522

Query: 555 MEERRKLESQARTAASLHAEIMDL------YRE-IEDE-AKDLDRRAAHLKA-KETQQVQ 605
            ++R+++E++   A  L  E+         YRE +E E AK +++  A  +A  E  +  
Sbjct: 523 DQQRQEMEAERAEAKRLKLEMEQSASKAREYREKLEAERAKVVEKAQAEARAIIEEARAA 582

Query: 606 QELNFAKVQIDTVVQDFEN--QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
            +L  A+++     QD  +  Q+ D+ A E   L+ E+E  I                E 
Sbjct: 583 SDLALAELKEIKKRQDKLDWQQVNDSRA-EARRLLNEAERNIGGPA---------QEPEA 632

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
              +     G+ V +  +G K ATV+ V   D T+ +Q G +++  K++ +R +
Sbjct: 633 PPPTRDAAVGDTVELLKMGTK-ATVLSV-NKDGTLQLQAGILKISAKQSEVRVV 684


>gi|291535463|emb|CBL08575.1| MutS2 family protein [Roseburia intestinalis M50/1]
          Length = 808

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 190/626 (30%), Positives = 295/626 (47%), Gaps = 66/626 (10%)

Query: 91  DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
           D ++  +PL + ++ C  L+E E             I D AS  L  IR   +   + + 
Sbjct: 137 DQIEPLTPLCDEIRRC-ILSEDE-------------IADDASSTLRSIRKSMRGMNDKIR 182

Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
           + +  +         +   +IT R  R C+ +KA  K  +P G+  + SSSG+T F+EP 
Sbjct: 183 AQMNSMINNTTTRSYLQDAVITMRDGRYCLPVKAEAKSQVP-GMVHDQSSSGSTLFIEPL 241

Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
             V  NN    L   E  E   IL+ L+   A    ++    + + E+D  FA+A FAQ 
Sbjct: 242 AVVNLNNEYKALLIKEKEEIEVILANLSNLTAGYSMQLHTDYNVLTELDFIFAKAAFAQT 301

Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
            +GV P  ++      D  INI+  +HPLL    +                         
Sbjct: 302 YNGVAPTFNT------DGRINIKKGRHPLLDAKKV------------------------- 330

Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
                     VPID+++  +  +++ITGPNTGGKT S+KT+GL +LM +AGL++PA    
Sbjct: 331 ----------VPIDVRLGEDFTLLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPASERS 380

Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
            L  F+ + ADIGD QS+EQ+LSTFS H++ I  IL  V+  SLVL DE+ +GTDP+EG 
Sbjct: 381 ELGIFEEVFADIGDEQSIEQSLSTFSSHMTNITRILSQVNDRSLVLFDELCAGTDPTEGA 440

Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
           ALA SIL  L+      + TTHY++L     + +  ENA  EF +E+L PTYR+L G  G
Sbjct: 441 ALAISILSKLKLYGARVMATTHYSELKVFALQTSGVENACCEFDVESLSPTYRLLIGIPG 500

Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
            SNA  I+  +G    II+ A+      R         +L   L + R  +E +      
Sbjct: 501 KSNAFAISTKLGLGEDIIEDAKG-----RISENDMNFEDLLADLEKSRITIEKEQLEINQ 555

Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
              EI  L  ++E + + LD     +  +  +Q    +  AK   D  +++F N+   A 
Sbjct: 556 YKEEIQKLKEQLEQKQERLDASRDKILREANEQAYNIIKEAKDLADETIRNF-NKYGTAH 614

Query: 631 ADEINSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 688
           A  ++ + KE       +  A +   D   + +  +      + G++V V S+     TV
Sbjct: 615 A-PVSEMEKERTKLRDKMNNAQKKMSDQKKNAAPNHKIPKKLRIGDRVKVISMNLN-GTV 672

Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNI 714
             +P     + VQ G +R  V  N++
Sbjct: 673 HSLPNAKGDLYVQMGILRSLVNINDL 698


>gi|222524571|ref|YP_002569042.1| MutS2 family protein [Chloroflexus sp. Y-400-fl]
 gi|222448450|gb|ACM52716.1| MutS2 family protein [Chloroflexus sp. Y-400-fl]
          Length = 819

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 204/722 (28%), Positives = 339/722 (46%), Gaps = 94/722 (13%)

Query: 27  TSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEA 85
           T+ A  +++  P + +    D+   +  A  G +L  + +  +  TL++   + ++L+  
Sbjct: 52  TAEARLLLEEWPEVSIGGARDVRRAVQHAARGGILDGTTLREIAATLQSAALLRQRLSR- 110

Query: 86  AELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAERK 143
             LD    +R+  L++L      +  L E I   I  D +   +LD AS  L  +R E +
Sbjct: 111 --LD----ERFPLLIDLANTLPVIPSLSEAIDRAIGDDGQ---VLDSASPTLARLRHEVR 161

Query: 144 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
                L   L+ +      AG + +P+IT R  R  + +KASH+  +  G+  + S SGA
Sbjct: 162 VAFNRLQERLQSMIHSSALAGALQEPIITVRNGRYVIPVKASHRREV-RGLVHDQSGSGA 220

Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
           T ++EP   VE NN    L ++E  E   ILS L+ ++  +   I   ++ +  +DLAFA
Sbjct: 221 TLYIEPMAIVELNNRWRELQSAEAEEVQRILSTLSDQVGAAANLITSTVNTLATLDLAFA 280

Query: 264 RAGFAQWMDGVCPIL---SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
            A +A       P +         S +  + +   +HPLL   ++               
Sbjct: 281 LARYAIATRSTAPEIVDWRPDDPPSPEPPLRLTRARHPLLPAETV--------------- 325

Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
                               VPID+ +  E  +++ITGPNTGGKT ++KT GL +LM++A
Sbjct: 326 --------------------VPIDLWLGGEFSLLLITGPNTGGKTVALKTTGLLALMAQA 365

Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR--------- 431
           G+ +PA    RLP F  I ADIGD QS+EQ+LSTFS H++ I+ +L+ ++          
Sbjct: 366 GMQIPADQPSRLPVFQYIFADIGDEQSIEQSLSTFSSHMANIIRVLQTLTAAQQMPSESD 425

Query: 432 ----------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
                      +LVL DE+G+GTDP EG ALA +I+  L +   L + TTHYA+L     
Sbjct: 426 AYALFDDRRPAALVLFDELGAGTDPVEGAALARAIIGRLLELGVLGIATTHYAELKAFAY 485

Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
                +NA+ EF +ETL PTYR+  G  G SNAL IA  +G D  +I++A+  +     +
Sbjct: 486 TTPGVQNASVEFDIETLAPTYRLSIGIPGRSNALAIAARLGLDPTLIEQARSFI-----D 540

Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE--------IEDEAKDLDRRA 593
           R++ +  +L   +  ER    +  + A  L  +  + YR+           E       A
Sbjct: 541 RKEAQVEDLLAGIQRERDAAAAALQRAEELRLD-AERYRDRLAAEQQAFAAERAAALEAA 599

Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
                 E ++V+Q+L   + +  TV  +   Q  + +   + +  ++S+ A+A      R
Sbjct: 600 RAEIEAELREVRQQLRRLREEFRTV--NISRQWLEEAEKRLATTAEQSQQAVA------R 651

Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
            +     +    +    Q G+QV V S+G     +V +  +D T  VQ G  R+ V  N+
Sbjct: 652 LNVQTQPAPPPPAEKPLQVGDQVQVTSIGLN-GEIVAIDEEDQTATVQVGGFRMTVSFND 710

Query: 714 IR 715
           ++
Sbjct: 711 LK 712


>gi|407796063|ref|ZP_11143019.1| DNA mismatch repair protein MutS [Salimicrobium sp. MJ3]
 gi|407019417|gb|EKE32133.1| DNA mismatch repair protein MutS [Salimicrobium sp. MJ3]
          Length = 781

 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 213/723 (29%), Positives = 356/723 (49%), Gaps = 77/723 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L E  KL N+T  A  +++ +  +    I +I   L     G +LS +E   V  T+   
Sbjct: 40  LPEVVKLQNETDEAQQVLRLKGHIPFGGIRNIKPHLKRTSIGGVLSATECVDVATTIYGG 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
             + + + E  E D        P+L EL+   + L  LE  I   ID    +++D AS+ 
Sbjct: 100 KELKRFVEEMEEPD-------MPILRELVDIIHPLPILERTIRNSIDDNG-VVMDGASDT 151

Query: 135 LELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           L  IR+       R  + ++S  K+ + ++  A      ++T R  R  + +K  ++  +
Sbjct: 152 LRSIRSRINTLESRLRDKMESYTKQQSEKLSDA------IVTIRNERYVLPVKQEYRGSI 205

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT--AEIAKSEREI 248
             GI  + SSSGAT F+EP+  V+ NN    L  + + E+  +  +L   +E  + +R I
Sbjct: 206 K-GIVHDQSSSGATLFIEPQPVVDINN---DLQEARVQEKREVDRILGELSEAIEEDRPI 261

Query: 249 KYLMDRVLE-IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
                RVL  +D  FARA   + M    P ++++  +    +      +HPL+       
Sbjct: 262 LAENVRVLAGLDFIFARAKLGRSMGAAMPAMNNEGRILMKQA------RHPLI------- 308

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                            SE  V           VP DI++  +   ++ITGPNTGGKT +
Sbjct: 309 -----------------SEEEV-----------VPNDIELGTDFTSIIITGPNTGGKTVT 340

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +K +GL +LM++AGL +PA +   L  FD + ADIGD QS+EQ+LSTFS H++ IVDIL+
Sbjct: 341 LKLVGLCTLMAQAGLQIPAMDGCELAVFDNVYADIGDEQSIEQSLSTFSSHMTNIVDILD 400

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
            V   +LVL DE+G+GTDP EG ALA +IL  + D+    + TTHY +L           
Sbjct: 401 KVDDSTLVLFDELGAGTDPQEGAALAMAILDEVVDKDARVIATTHYPELKAYGYNRENVV 460

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NA+ EF++ETL PTYR+L G  G SNA  I++ +G    +I  A+   ER+  + +    
Sbjct: 461 NASVEFNIETLEPTYRLLIGVPGRSNAFEISRRLGLREDVISAAK---ERVGVDSES--V 515

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
             +  SL E RR+ E+    A  +  E  ++Y E+  E K  + +   L  K  ++ +Q 
Sbjct: 516 ESMIASLDEARREAEADYERAEEIRREAEEIYSELNSEWKRFEDQKEKLYKKAEEKAKQS 575

Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
           ++ A+ +   +V + + Q++++S  + +  I+  +    A  E  + +      ++N + 
Sbjct: 576 VDKAREEAQGIVDELK-QMKNSSELKEHEWIEARKMFDEAEPELTKKEKQPKNKQSNETK 634

Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
              Q G++V + +L ++   +VE  G +D   VQ G M+V+ K+ ++  +   K +    
Sbjct: 635 EL-QAGDEVKLLTL-NQQGVIVE-KGRNDEYQVQVGSMKVKAKRKDLEFVKTKKPEREKQ 691

Query: 728 PAP 730
            AP
Sbjct: 692 IAP 694


>gi|423612727|ref|ZP_17588588.1| MutS2 protein [Bacillus cereus VD107]
 gi|401244715|gb|EJR51074.1| MutS2 protein [Bacillus cereus VD107]
          Length = 786

 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 210/717 (29%), Positives = 350/717 (48%), Gaps = 87/717 (12%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           Q+  ++ +  + +  S PL    I DI   +  A  G +LSP+E+  +  T+     + +
Sbjct: 47  QETTDEAAKVIRLKGSVPL--GGISDIRPNVKRAKIGSMLSPNELLDIANTMYGSRQMKR 104

Query: 81  KLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
            + +  E +G  L    P+LE  +     L +LE+KI  CI     ++ D AS+ L  IR
Sbjct: 105 FIDDMIE-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIR 158

Query: 140 AE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
            +      R  E L+++ +   AQ   +  I    +T R  R  + +K  ++ +   GI 
Sbjct: 159 NQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIV 213

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
            + S+SG T F+EP+  VE NN        E  E   IL +LT E+A     +   ++ V
Sbjct: 214 HDQSASGQTLFIEPQVIVELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVV 273

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
             +D  FA+A +A+ +    PI++++ ++    +      +HPL+               
Sbjct: 274 ANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI--------------- 312

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
           +P                    +  VP +I +  +   +VITGPNTGGKT ++KT+G+  
Sbjct: 313 DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICV 352

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM+++GL++P  +   +  F  I ADIGD QS+EQ+LSTFS H+  IVDILE    ESLV
Sbjct: 353 LMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLV 412

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DE+G+GTDP EG ALA SIL  + +R    V TTHY +L        +  NA+ EF +
Sbjct: 413 LFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDV 472

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
            TL PTY++L G  G SNA  I+K +G   ++I RA+  +           K E   + +
Sbjct: 473 NTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKL 526

Query: 556 EERRKLESQARTAASLHAEIMD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
           EE +K   + R  A  H +  + L+RE++ +  + +        K  ++ ++++  AK +
Sbjct: 527 EESQKNAERERKEAEEHRKQSEKLHRELQRQIVEFNEERDERLLKAQKEGEEKVEAAKKE 586

Query: 615 IDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFT 669
            + ++Q+   QLR A    +  + LI+     E A+  +V+  +          N  +  
Sbjct: 587 AEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAVPELVKKQK---------VNVKNTA 636

Query: 670 PQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           P+     G++V V + G K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 637 PKQQLRAGDEVKVLTFGQKGQLLEKV--SDTEWNVQIGILKMKVKESNMEYINTPKQ 691


>gi|311069349|ref|YP_003974272.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           atrophaeus 1942]
 gi|419819994|ref|ZP_14343611.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           atrophaeus C89]
 gi|310869866|gb|ADP33341.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           atrophaeus 1942]
 gi|388475847|gb|EIM12553.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           atrophaeus C89]
          Length = 785

 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 210/733 (28%), Positives = 350/733 (47%), Gaps = 86/733 (11%)

Query: 15  KSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           K LEE    +++ S+ + +    P     + DI   L  A  G +LSP+E   +   L A
Sbjct: 45  KQLEE----VDEASSVIRLRGQAPF--GGVTDIRAALKRAEIGSVLSPAEFRDISGLLYA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
           V  +   L    E DG  +    PLL +  +    L+ELE +I  CID     +LD ASE
Sbjct: 99  VKQMKNFLGSMYE-DGVEI----PLLNQYTEQLIGLSELEREINSCID-DYGEVLDHASE 152

Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++  
Sbjct: 153 TLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
              GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL  LT   A+   E+ 
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRELTEHTAEHTHELF 267

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
             +  +  +D  FA+A +A+      P+++ +  +    +      +HPLL         
Sbjct: 268 QNLQVLQTLDFIFAKAKYAKASKATKPLINDRGFIRLKKA------RHPLL--------- 312

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                  P +  V N                   DI++  +   +VITGPNTGGKT ++K
Sbjct: 313 -------PPEQVVAN-------------------DIELGGDFTTIVITGPNTGGKTVTLK 346

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           TLGL ++M+++GL++PA+       F+ + ADIGD QS+EQ+LSTFS H+  IV ILE V
Sbjct: 347 TLGLLTVMAQSGLHIPAEEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILERV 406

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
           +  SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA
Sbjct: 407 NENSLVLFDELGAGTDPQEGAALAMSILDEVHHTNARVIATTHYPELKAYGYNRNGVMNA 466

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF++ETL PTY++L G  G SNA  I++ +G    II +A+  +       + +    
Sbjct: 467 SVEFNIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM-----TAEHNEVDT 521

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
           +  SL   +++ E++     S+  E   L++E++ +  +L+ +   L  +  Q+  +++N
Sbjct: 522 MIASLEHSKKRAEAELSETESIRKEAETLHKELQQQIIELNSKKDKLLEEAEQKAIEKVN 581

Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
            A  + + ++ +    +++ +     E+ +  K  E A+ A              +    
Sbjct: 582 AATKEAEDIIHELRLIKSEHKSFKDHELINAKKRLEDAVPAF----EKSKQPPKQKKEKR 637

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
              P  G++V V + G K  T++E  G  +   VQ G ++++VK+ ++  + +S      
Sbjct: 638 ELKP--GDEVKVLTFGQK-GTLLEKTGSSEWN-VQIGILKMKVKEKDLEFMKSS------ 687

Query: 727 NPAPRLRKQVCTC 739
            P P+  K +   
Sbjct: 688 -PEPKKEKTIAAV 699


>gi|402838646|ref|ZP_10887149.1| MutS2 family protein [Eubacteriaceae bacterium OBRC8]
 gi|402272206|gb|EJU21427.1| MutS2 family protein [Eubacteriaceae bacterium OBRC8]
          Length = 785

 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 186/633 (29%), Positives = 307/633 (48%), Gaps = 84/633 (13%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           I D AS DL  IR +     +N+ + L ++ +    +  +   ++T R  R  V +K+ +
Sbjct: 142 ISDDASADLRRIRRQINSEKQNIKNKLNEIVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           +   P GI  + SSSGAT F+EP   V  NN    L   E  E   IL+ LT+ + +   
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           +I +  D + ++D   A+   +  M+ + P ++ + ++   ++      +HPL+      
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKLINA------RHPLIE----- 309

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                       K  V +S + +G                   E   ++ITGPNTGGKT 
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KTLGL SLM +AGL++P      +  FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           + V   SLVL DE+G+GTDP EG  LA SIL+ L+ +  L V TTHY++L          
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILETLKSKNILTVATTHYSELKNYALTQENV 459

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV----------- 535
            NA+ EF + TL PTY++L G  G SNA  I+K +G   +II  A++ +           
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIKTDSIQMEDVI 519

Query: 536 ---ERLRPERQQHRKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYREIEDEAKD 588
              E++R + +  +K E  Q  +E+    R KLE++ +     + ++      IED AK+
Sbjct: 520 SKLEKIRTDYE--KKQEELQKELEDVKYIRLKLENKEQRQKEQNKKL------IED-AKE 570

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
             R+       E   + + LN  K++  +  ++ + Q+ +   +      K ++S    I
Sbjct: 571 KARKLIEDAKSEADIISKNLN--KIKNSSDYKNIDRQMNELKTNINKYKEKYAKSKEELI 628

Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
            ++ +P ++ +V            G+ V+V S   K A V+ V    D VL++ G +++ 
Sbjct: 629 AKSSKPLENINV------------GDIVYVNSFA-KNAKVLSVDDAKDEVLIELGAIKMT 675

Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQVCTCTS 741
           VKK N+      K K +      L  +  T  +
Sbjct: 676 VKKENLSTQEKIKEKKSTKAGKILTNKTKTAQT 708


>gi|240146928|ref|ZP_04745529.1| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
 gi|257200911|gb|EEU99195.1| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
          Length = 808

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 190/626 (30%), Positives = 295/626 (47%), Gaps = 66/626 (10%)

Query: 91  DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
           D ++  +PL + ++ C  L+E E             I D AS  L  IR   +   + + 
Sbjct: 137 DQIEPLTPLCDEIRRC-ILSEDE-------------IADDASSTLRSIRKSMRGMNDKIR 182

Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
           + +  +         +   +IT R  R C+ +KA  K  +P G+  + SSSG+T F+EP 
Sbjct: 183 AQMNSMINNTTTRSYLQDAVITMRDGRYCLPVKAEAKSQVP-GMVHDQSSSGSTLFIEPL 241

Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
             V  NN    L   E  E   IL+ L+   A    ++    + + E+D  FA+A FAQ 
Sbjct: 242 AVVNLNNEYKALLIKEKEEIEVILANLSNLTAGYSMQLHTDYNVLTELDFIFAKAAFAQT 301

Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
            +GV P  ++      D  INI+  +HPLL    +                         
Sbjct: 302 YNGVAPTFNT------DGRINIKKGRHPLLDAKKV------------------------- 330

Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
                     VPID+++  +  +++ITGPNTGGKT S+KT+GL +LM +AGL++PA    
Sbjct: 331 ----------VPIDVRLGEDFTLLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPASERS 380

Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
            L  F+ + ADIGD QS+EQ+LSTFS H++ I  IL  V+  SLVL DE+ +GTDP+EG 
Sbjct: 381 ELGIFEEVFADIGDEQSIEQSLSTFSSHMTNITRILSQVNDRSLVLFDELCAGTDPTEGA 440

Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
           ALA SIL  L+      + TTHY++L     + +  ENA  EF +E+L PTYR+L G  G
Sbjct: 441 ALAISILSKLKLYGARVMATTHYSELKVFALQTSGVENACCEFDVESLSPTYRLLIGIPG 500

Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
            SNA  I+  +G    II+ A+      R         +L   L + R  +E +      
Sbjct: 501 KSNAFAISTKLGLSEDIIEDAKG-----RISENDMNFEDLLADLEKSRITIEKEQLEINQ 555

Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
              EI  L  ++E + + LD     +  +  +Q    +  AK   D  +++F N+   A 
Sbjct: 556 YKEEIQKLKEQLEQKQERLDASRDKILREANEQAYNIIREAKDLADETIRNF-NKYGTAH 614

Query: 631 ADEINSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 688
           A  ++ + KE       +  A +   D   + +  +      + G++V V S+     TV
Sbjct: 615 A-PVSEMEKERTKLRDKMNNAQKKMSDQKKNAAPNHKIPKKLRIGDRVKVISMNLN-GTV 672

Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNI 714
             +P     + VQ G +R  V  N++
Sbjct: 673 HSLPNAKGDLYVQMGILRSLVNINDL 698


>gi|291557709|emb|CBL34826.1| MutS2 family protein [Eubacterium siraeum V10Sc8a]
          Length = 793

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 186/620 (30%), Positives = 300/620 (48%), Gaps = 82/620 (13%)

Query: 129 DRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
           D AS  L  IR   +R      E LD L+K  + Q +    + + L+T R  R  V +K 
Sbjct: 144 DSASPQLAAIRRSIQRKSLAVRERLDKLIKSQSTQKY----LQESLVTMRDGRFVVPVKT 199

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE-------IAEETAILSLL 237
            +K  +  G+  + S++GAT F+EP   VE NN E+R+   E       I +E + L   
Sbjct: 200 EYKSEIS-GLVHDTSATGATLFIEPMAVVEANN-EIRVLQIEEQKEIERIIKEMSELVGS 257

Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
            AE   ++ EI      VL +++ FA+A     M  V P+++ +         N+   +H
Sbjct: 258 FAEPMINDYEI------VLTLEIYFAKANLGAKMKAVTPVITDKP------CFNLIRARH 305

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
           PL+                                     D  VPI +++  +   +++T
Sbjct: 306 PLI-----------------------------------DKDKVVPISLELGNDYSSLIVT 330

Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
           GPNTGGKT S+KT GL  LM+  G+ +PA  +  +  FD +  DIGD QS+EQ+LSTFS 
Sbjct: 331 GPNTGGKTVSLKTAGLLVLMAMCGMMIPASENSVIGMFDELYVDIGDEQSIEQSLSTFSS 390

Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
           H++ I  IL     +SL+++DE+ SGTDP EG ALA SIL   R R    + TTHY ++ 
Sbjct: 391 HMTNIARILRTADEKSLIMLDELCSGTDPVEGSALAVSILDEFRKRDCKVIATTHYQEVK 450

Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
               K    ENA+ EF ++TLRPTYR++ G  G SNA  I+  +G    II  A++LV  
Sbjct: 451 MYAIKTDNVENASCEFDIKTLRPTYRVIVGMPGKSNAFAISSKLGISSDIIDNAKELV-- 508

Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
                +  R  E+ QSL + R++LE    +AA+   +  ++  +++ E   L++     K
Sbjct: 509 ---STEDKRFEEVVQSLEKTRQELEKLKSSAAAEQKKSKEITEQLKAERDQLEKD----K 561

Query: 598 AKETQQVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
            KE Q V+ +    +   + Q D ++++ E   +   + +    +K + S I + V A  
Sbjct: 562 EKELQDVRSKAASIIEEVRFQGDLMLEELERLKKQKESADFAQKVKGARSHINSSVNAMY 621

Query: 654 PDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
              +  + +       P   + G+ V +  L +K  T++ +P   +   VQ G M+ + K
Sbjct: 622 DTANPIMQKKIDHYVLPRPLKVGDTVRLADL-NKEGTLLRLPDSKNMCFVQVGAMKTKTK 680

Query: 711 KNNIRPIPNSKRKNAANPAP 730
             N+R +   K+++   P P
Sbjct: 681 LENLRLV-EEKKESKKQPTP 699


>gi|372324775|ref|ZP_09519364.1| Recombination inhibitory protein [Oenococcus kitaharae DSM 17330]
 gi|366983583|gb|EHN58982.1| Recombination inhibitory protein [Oenococcus kitaharae DSM 17330]
          Length = 795

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 190/582 (32%), Positives = 306/582 (52%), Gaps = 72/582 (12%)

Query: 23  LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR---AVNNV 78
           LL QT  AL + + +  L +    D+  I        +L+ SE+  +  +L+   AV + 
Sbjct: 46  LLGQTDDALLIDRRRGGLPIRATNDLTEIFKRIKLKAVLASSELADLNASLQSSQAVIDF 105

Query: 79  WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
           ++ + +  E+  D+LQ+   +L L+      ++L +++   ID +  + LD AS+ L  I
Sbjct: 106 FQTIKD--EIWFDNLQQ---ILFLVNRLTDFSQLSQRLDQTIDDQGKM-LDTASKKLAHI 159

Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
           R   +    N+  LL K+      A  + + +IT R   + + +KA +K     G+  + 
Sbjct: 160 RKNTQLTETNIRELLLKMTKG-NDAKYLSENVITTRDGVLVLPVKAENKKHFG-GVVHDQ 217

Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
           S SG T ++EP+ AV  N+    L   E  E  AIL  ++  +     ++K   + + E+
Sbjct: 218 SQSGLTLYIEPEAAVSLNDHLHDLEIDERREINAILIDISQSLFPLYEQLKLNNELIGEL 277

Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
           DL  A+A  A  MD + P ++S+        I+++  +HPLL                  
Sbjct: 278 DLIQAKARLANTMDAIKPQINSEK------EIDLQAARHPLL------------------ 313

Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
            SD                   V  DIK+  +   ++ITGPNTGGKT  MKTLGL  LM+
Sbjct: 314 PSDA------------------VANDIKLGHDFISLIITGPNTGGKTVLMKTLGLLQLMA 355

Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
           ++G+++ A  +  +  FD I ADIGD QSLEQ+LSTFS H+  I +I+     +SLVL+D
Sbjct: 356 QSGIFITADKNSSIYVFDNIFADIGDEQSLEQSLSTFSSHMMNIKEIIADSDTDSLVLLD 415

Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
           E+G+GTDPSEG ALA +I++ L +R  L + TTHY +L    D+     NA+ EF L+TL
Sbjct: 416 ELGAGTDPSEGAALAMAIVENLSERKILNLTTTHYPELKVFADQKPFAVNASMEFDLKTL 475

Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
           RPTYR+L G  G SNA+ IA+ +G D+++++RA+  V+   P+ Q+   + L Q L+ +R
Sbjct: 476 RPTYRLLIGIPGQSNAITIARRLGVDKRVLERAEAYVD---PKDQE--LNNLIQGLVFQR 530

Query: 559 RKLESQARTAASLHAEIMDLYREIED---EAKDLDRRAAHLK 597
           + L+ Q            DL R + D   E ++LDR+++ L+
Sbjct: 531 QDLDQQQE----------DLQRRLADVNSEKENLDRQSSELE 562


>gi|363890216|ref|ZP_09317557.1| hypothetical protein HMPREF9628_01999 [Eubacteriaceae bacterium
           CM5]
 gi|361965897|gb|EHL18859.1| hypothetical protein HMPREF9628_01999 [Eubacteriaceae bacterium
           CM5]
          Length = 785

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 186/633 (29%), Positives = 307/633 (48%), Gaps = 84/633 (13%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           I D AS DL  IR +     +N+ + L ++ +    +  +   ++T R  R  V +K+ +
Sbjct: 142 ISDDASADLRRIRRQINSEKQNIKNKLNEIVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           +   P GI  + SSSGAT F+EP   V  NN    L   E  E   IL+ LT+ + +   
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           +I +  D + ++D   A+   +  M+ + P ++ + ++   ++      +HPL+      
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKLINA------RHPLIE----- 309

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                       K  V +S + +G                   E   ++ITGPNTGGKT 
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KTLGL SLM +AGL++P      +  FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           + V   SLVL DE+G+GTDP EG  LA SIL+ L+ +  L V TTHY++L          
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILETLKSKNILTVATTHYSELKNYALTQENV 459

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV----------- 535
            NA+ EF + TL PTY++L G  G SNA  I+K +G   +II  A++ +           
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIKTDSIQMEDVI 519

Query: 536 ---ERLRPERQQHRKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYREIEDEAKD 588
              E++R + +  +K E  Q  +E+    R KLE++ +     + ++      IED AK+
Sbjct: 520 SKLEKIRTDYE--KKQEELQKELEDVKYIRLKLENKEQRQKEQNKKL------IED-AKE 570

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
             R+       E   + + LN  K++  +  ++ + Q+ +   +      K ++S    I
Sbjct: 571 KARKLIEDAKSEADIISKNLN--KIKNSSDYKNIDRQMNELKTNINKYKEKYAKSKEELI 628

Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
            ++ +P ++ +V            G+ V+V S   K A V+ V    D VL++ G +++ 
Sbjct: 629 AKSSKPLENINV------------GDIVYVNSFA-KNAKVLSVDDAKDEVLIELGAIKMT 675

Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQVCTCTS 741
           VKK N+      K K +      L  +  T  +
Sbjct: 676 VKKENLSNQEKIKEKKSTKAGKILTNKTKTAQT 708


>gi|331089007|ref|ZP_08337914.1| hypothetical protein HMPREF1025_01497 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330406459|gb|EGG85972.1| hypothetical protein HMPREF1025_01497 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 791

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 219/732 (29%), Positives = 340/732 (46%), Gaps = 122/732 (16%)

Query: 5   VVQKAQIPFGKS--LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSP 62
           +++K +I FG +  +EES K L                     +I G LN+A   +LL  
Sbjct: 57  IIKKGRISFGDAAPVEESLKRL---------------------EIGGALNTA---ELL-- 90

Query: 63  SEICAV-RRTLRAV----NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
             IC +   T RA     ++  + L +  ++  D L+  +PL   ++ C  ++E E    
Sbjct: 91  -RICRLLSNTARAKSYGRHDTQEDLADCLDIYFDGLEPLTPLSNEIERC-IISEDE---- 144

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKR 174
                    I D AS  L+ IR    R+M NL+  +    + +        +   LIT R
Sbjct: 145 ---------ISDDASSALKHIR----RSMNNLNDRVHTTLSGLVNGSLRTYLQDALITMR 191

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R C+ +KA ++  +  G+  + S+SG+T F+EP   V+ NN    L   E  E   IL
Sbjct: 192 GDRYCIPVKAEYRSQV-QGLIHDQSASGSTLFIEPMAIVKLNNDLKELYVQEQDEIRKIL 250

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
           + L+ E A+   EI+     + ++D  FAR   A  M    PIL+ +        I I  
Sbjct: 251 ASLSEEAAQYIEEIRTDYRSLTDLDFIFARGALALTMRASRPILNEEGR------IRIRE 304

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
            +HPLL    +                                   VPI + +  E  ++
Sbjct: 305 GRHPLLDQKKV-----------------------------------VPITVSLGDEFSLL 329

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
           +ITGPNTGGKT S+KT+GL +LM +AGL++PA +   +  F  + ADIGD QS+EQ+LST
Sbjct: 330 IITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAGDRSEIAVFRQVYADIGDEQSIEQSLST 389

Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
           FS H++ IV  L+ V   SLVL DE+G+GTDP+EG ALA +IL +L  R    + TTHY+
Sbjct: 390 FSSHMTNIVSFLKKVDDRSLVLFDELGAGTDPTEGAALAIAILSHLHKRNIRTMATTHYS 449

Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
           +L          ENA  EF +E LRPTYR+L G  G SNA  I+  +G    II  A+K 
Sbjct: 450 ELKIYALSTPGVENACCEFDVENLRPTYRLLIGIPGKSNAFAISGKLGLPDYIIDDAKK- 508

Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
               R   Q     +L   L   RR +E +    A+   E   L R+   + + L+ +  
Sbjct: 509 ----RLSEQDVSFEDLLSDLEASRRTIEKEQAEIAAYKKEAETLKRQAVQKQEKLEEQRD 564

Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESE--------SAI 645
            +  +  ++    L  AK   D  +++F    + + SA E+    KE E        ++ 
Sbjct: 565 RIIREANEKANAILREAKEVADETIRNFHKFGKENISAAEME---KERERLRKKIKDTSA 621

Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
           +A ++ ++P   +  S+        + GE V V S+ +   T+  +P     V VQ G +
Sbjct: 622 SASLKTNKPKKTYKPSDF-------KLGESVKVLSM-NLTGTIGSLPDARGNVTVQMGIL 673

Query: 706 RVRVKKNNIRPI 717
           R +V  +++  I
Sbjct: 674 RSQVNISDLEII 685


>gi|238019115|ref|ZP_04599541.1| hypothetical protein VEIDISOL_00977 [Veillonella dispar ATCC 17748]
 gi|237863814|gb|EEP65104.1| hypothetical protein VEIDISOL_00977 [Veillonella dispar ATCC 17748]
          Length = 812

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 177/615 (28%), Positives = 297/615 (48%), Gaps = 58/615 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           +LD AS  L  +R    +  E + + ++ +           + +IT+R +R  + +K  +
Sbjct: 161 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 220

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 243
           +    DG+  + S++G T ++EP   V  NN    L  + I EE  +L +   L+A + +
Sbjct: 221 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 276

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
              ++    ++V  I+  + +A  A    GV  ILS+      D ++N+   +HPL+   
Sbjct: 277 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 327

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                        P                    +  VP +I++    R+++ITG NTGG
Sbjct: 328 -------------P-------------------PNVVVPTNIQLGTSYRILLITGSNTGG 355

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT S+KTLGL SLM++ GL++PA +   LP F  I ADIGD QS+E +LSTFS H+++++
Sbjct: 356 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPIFQNIFADIGDEQSIEASLSTFSAHMTQVI 415

Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
            I++      LVL+DE+GSGTDP EG ALA SIL++ R +  L +V+THY +L       
Sbjct: 416 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 475

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
              EN   EF   TL+PTYR+  G  G S+AL+IA  +G  + I+ RA +     + +  
Sbjct: 476 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVTRAAE----YKSQFG 531

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
            H   E+   L E+ RK   + R       E   +  ++E E K  + +   + AK    
Sbjct: 532 SHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEKKQFNEKRKQILAKAQAD 591

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
            +      +V+ + +++  ++Q  + + D+  S I  +   I+ +     P DD   S T
Sbjct: 592 AESMKRSLRVEGEAIIKQLKSQFSETNKDKRQSAINAARKGISNVHVPEAPVDDDRKSLT 651

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 721
             +    + G+ V+V SL   L TV+ + G+   V +      V+V   ++  R   N  
Sbjct: 652 ADA---IKVGQAVYVTSL-RSLGTVLAINGNRVNVDINGLTATVKVSELQSTTREEGNKL 707

Query: 722 RKNAANPAPRLRKQV 736
            +      P+ RK++
Sbjct: 708 EREQKAAMPKTRKRM 722


>gi|366088425|ref|ZP_09454910.1| mutS family ATPase [Lactobacillus zeae KCTC 3804]
          Length = 786

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 209/720 (29%), Positives = 352/720 (48%), Gaps = 80/720 (11%)

Query: 21  QKLLNQTS-AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q+ L++T+  A A+     + +  +E+I   L     G +L+  E+ ++ R L+ V+ + 
Sbjct: 44  QRALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLNGQELASISRVLQTVSAID 103

Query: 80  KKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
           K LT+   ++D      +  L  L +    L +L  ++   +D    +  D AS +L  I
Sbjct: 104 KFLTDLQDQID------FRQLYTLQEELTALPQLSRRLKTAVDPDGTLT-DEASPELHGI 156

Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
           R + KR   ++ + + +   +  Q+  +  P++T R  R  + +KA+++     G+  + 
Sbjct: 157 REQIKRIESDIRNKMSEYT-RGAQSKYLSDPIVTIRDDRYVIPVKAAYRSKF-GGVVHDQ 214

Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
           S++G T F+EP+  V  NN       +E AE   +L+ L+ E+A    +IK     +   
Sbjct: 215 SATGQTLFVEPQAIVALNNRLREAQMAETAEVNRVLAELSNELAPYTGQIKANAAVLGHF 274

Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
           D   A+A  A+      P++SS      D+ + +   +HPL+                  
Sbjct: 275 DFINAKAKLAKNQKATEPLVSS------DNDVLLRQARHPLI------------------ 310

Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
                +    VG+            DI +  + + +VITGPNTGGKT ++KTLGL  LM 
Sbjct: 311 -----DPHQVVGN------------DIPLGADYQAMVITGPNTGGKTITLKTLGLLQLMG 353

Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
           ++GL++PA +  R+  FD + ADIGD QS+EQNLSTFS H+  IV IL+ +SR SLVL D
Sbjct: 354 QSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLSTFSAHMDNIVHILKQLSRNSLVLFD 413

Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
           E+G+GTDP EG ALA +IL  + +     V TTHY +L        +  NA+ EF  +TL
Sbjct: 414 ELGAGTDPQEGAALAIAILDAVGEIGAYVVATTHYPELKLYGYNTPKTINASMEFDSKTL 473

Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
           +PTYR+L G  G SNA +I+  +G  + I+ RA+ ++         H  + +   L  +R
Sbjct: 474 QPTYRLLVGVPGRSNAFDISMRLGLPQPIVDRAKSMI-----SSDSHELNNMISDLERQR 528

Query: 559 RKLESQART-------AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
           +  E+           A +LH E+ D Y+    E     R A   +AKE  +    ++ A
Sbjct: 529 KAAENARAAAQRQLADAQALHDELADAYKTFTTE-----RDAQLQQAKE--KANAMVDKA 581

Query: 612 KVQIDTVVQDF-ENQLRDASADEINSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSF 668
           +V+ D +++   + QL +  + + N LI    +A  A+   H+  P     V        
Sbjct: 582 QVKADKIIKQLRQMQLTNPGSVKENQLI----AAKTALKRLHQDEPLQKNRVLRREREKQ 637

Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
               G++V V S  D+  T++E   D D   VQ G ++++V  + +  +  +K+ +A  P
Sbjct: 638 ALHVGDEVKVASY-DQTGTLLE-QFDKDHWQVQMGILKMKVPTSELEKVKPTKQASAQRP 695


>gi|423670115|ref|ZP_17645144.1| MutS2 protein [Bacillus cereus VDM034]
 gi|401297475|gb|EJS03084.1| MutS2 protein [Bacillus cereus VDM034]
          Length = 786

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 212/700 (30%), Positives = 344/700 (49%), Gaps = 91/700 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  L    P+L
Sbjct: 65  LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
           NN   E R+   +  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +  
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291

Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
             PI++++ ++    +      +HPL+               +P                
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314

Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
               +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   + 
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370

Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
            F  I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430

Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
            SIL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490

Query: 514 ALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
           A  I+K +G   ++I RA+  +  +  + E    +  E  ++   ER++ E   + +  L
Sbjct: 491 AFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKL 550

Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
           H E+     E  DE     R    LKA+  ++ ++++  AK + D ++Q+   QLR A  
Sbjct: 551 HRELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKQEADGIIQEL-RQLRKAQL 602

Query: 632 DEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLG 682
             +  + LI+     E A   +V+  +          N  +  P+     G++V V + G
Sbjct: 603 INVKDHELIEAKSRLEGAAPELVKKQK---------INVKNTAPKQQLRAGDEVKVLTFG 653

Query: 683 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 654 QKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|418307751|ref|ZP_12919430.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21194]
 gi|365243513|gb|EHM84189.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21194]
          Length = 519

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 163/500 (32%), Positives = 267/500 (53%), Gaps = 56/500 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  ++ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--LIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLV 535
           +I+K +G    II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513


>gi|417655589|ref|ZP_12305299.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21193]
 gi|329728807|gb|EGG65228.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus aureus subsp. aureus 21193]
          Length = 519

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 163/500 (32%), Positives = 267/500 (53%), Gaps = 56/500 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  ++  ++ A  G +L+ SE+  ++R ++ V N +K       ++ D   +Y  L 
Sbjct: 65  LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     LT+L ++I     C    + D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL + E  E+  IL+ LT  +A ++++   + ++V+ ++D   A+A +++ + G  
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI         D ++ +    HPLL                       N E  V +    
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                  I+   + ET  V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             +  DIGD QS+EQ+LSTFS H++ IV+IL+   + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLLLFDELGAGTDPSEGAALAMS 433

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R    L + TTHY +L           NA+ EF ++TL PTY++L G  G SNA 
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493

Query: 516 NIAKSIGFDRKIIQRAQKLV 535
           +I+K +G    II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513


>gi|225386433|ref|ZP_03756197.1| hypothetical protein CLOSTASPAR_00180 [Clostridium asparagiforme
           DSM 15981]
 gi|225047464|gb|EEG57710.1| hypothetical protein CLOSTASPAR_00180 [Clostridium asparagiforme
           DSM 15981]
          Length = 805

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 219/735 (29%), Positives = 349/735 (47%), Gaps = 84/735 (11%)

Query: 5   VVQKAQIPFGKSL----------EESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNS 53
           + + A  P GK+L          EE +    QT+ A+  ++ +  +  S + DI   L  
Sbjct: 18  LTEYAASPLGKALCAALEPSSDLEEIRTWQQQTTDAVNRVRLKGTVSFSGVRDIGDSLKR 77

Query: 54  AVSGQLLSPSEICAVRR--TLRAVNNVWKKLTEA-AELDG--DSLQRYSPLLELLKNCNF 108
              G  LS  E+ ++    T  A    + +  +   E DG  DSL+   P+   L+    
Sbjct: 78  LEIGSSLSIPELLSISSLLTCSARAKAYGRHEDVDEENDGLSDSLE---PMFAALEP--- 131

Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
           LT L ++I  CI  +  +  D AS  L  +R   K   + + + L  +         +  
Sbjct: 132 LTPLNQEIKRCILSEDEVA-DDASPGLSHVRRAMKLAADKIHTQLNSILNS--NRTYLQD 188

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
            +IT R  R C+ +K+ +K  +P G+  + S++G+T F+EP   V  NN    L   E  
Sbjct: 189 AVITMRDGRYCLPVKSEYKNQVP-GMVHDQSATGSTLFIEPMAIVRLNNEIRELEIREQK 247

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E  A+L+ L+ + A    ++   M  + ++D  FA++  A+      P+ + + +     
Sbjct: 248 EIEAVLADLSNQAAPHCEDLAIDMQLLAQLDFIFAKSALARHYRCSAPVFNDRGY----- 302

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
            I+I+  +HPLL               +P          TV           VPI + + 
Sbjct: 303 -IHIKDGRHPLL---------------DP---------KTV-----------VPISVWLG 326

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
            +  ++++TGPNTGGKT S+KT+GL +LM +AGL++PA     L  FD + ADIGD QS+
Sbjct: 327 KDFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAWEGSELAVFDQVFADIGDEQSI 386

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQ+LSTFS H++ IV IL      SL L DE+G+GTDP+EG ALA +IL +L +     +
Sbjct: 387 EQSLSTFSAHMTNIVRILGEADSRSLCLFDELGAGTDPTEGAALAIAILSFLHNMKCRTM 446

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L          ENA+ EF++ETL+PTYR+L G  G SNA  I+  +G    II
Sbjct: 447 ATTHYSELKVFALSAPGVENASCEFNVETLQPTYRLLIGVPGKSNAFAISSKLGLPDYII 506

Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
             A+  +     E +     +L  SL + R  +E +     +   EI  L   +  + + 
Sbjct: 507 DDAKTHL-----EAKDESFEDLLSSLEKSRLTIEKEQEELKAYKDEIAQLKARLTQKEER 561

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
           LD R   L     ++ Q+ L  AK   D  ++    Q+   SAD  + L K+ E+  A +
Sbjct: 562 LDERKDKLLKNAAEEAQRILREAKETADQTIK----QINKLSAD--SGLNKQLEAQRAKL 615

Query: 649 VEAHR-PDDDFSVSETNTSS-FTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
            E  +  DD  ++     S   +P   + G+ V V S+G K  TV  +P     + VQ G
Sbjct: 616 REKLKEADDKLAIKAKGPSQPISPKKLKVGDGVKVLSMGLK-GTVSTLPNARGDLYVQMG 674

Query: 704 KMRVRVKKNNIRPIP 718
            +R  V   ++  +P
Sbjct: 675 ILRSLVNVKDLELLP 689


>gi|423598156|ref|ZP_17574156.1| MutS2 protein [Bacillus cereus VD078]
 gi|401237617|gb|EJR44068.1| MutS2 protein [Bacillus cereus VD078]
          Length = 786

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 211/698 (30%), Positives = 341/698 (48%), Gaps = 87/698 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  L    P+L
Sbjct: 65  LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL +LT E+A     I   ++ V  +D  FA+A +A+ +    
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIILSNVEVVANLDFIFAKALYAKRIKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++++ ++    +      +HPL+               +P                  
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   +  F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SNA 
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
            I+K +G   ++I RA+  +  +  + E    +  E  ++   ER++ E   + +  LH 
Sbjct: 493 EISKRLGLSNRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHR 552

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
           E+     E  DE     R    LKA+  ++ ++++  AK + + ++Q+   QLR A    
Sbjct: 553 ELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKQEAEGIIQEL-RQLRKAQLIN 604

Query: 634 I--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDK 684
           +  + LI+     E A   +V+  +          N  +  P+     G++V V + G K
Sbjct: 605 VKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQK 655

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
              + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 656 GQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|313114167|ref|ZP_07799719.1| putative recombination and DNA strand exchange inhibitor protein
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310623576|gb|EFQ06979.1| putative recombination and DNA strand exchange inhibitor protein
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 803

 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 208/700 (29%), Positives = 327/700 (46%), Gaps = 123/700 (17%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLE 101
           +E+++ +   AV G +LS  E+  V   LR   N+  W   +E   L  D         +
Sbjct: 68  VENVSQLAARAVKGGVLSMGELLMVAGALRNFQNLSSWYGASEHDALPTD---------D 118

Query: 102 LLKNCNFLTELEEKIGFCI---DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
           L         LE++I   I   D     + D AS  L  +R + +    ++   L+ +  
Sbjct: 119 LFYALAPQPGLEQQISSAILAPDA----MADTASHTLNDLRKKIRATENSIRDRLESMVR 174

Query: 159 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
            +  +  + + +++ R  R  V +K+ ++  +  GI  +VSS+GAT F+EP+  VE N  
Sbjct: 175 NMDTSKYLQESVVSMRNGRYVVPVKSEYRGEV-SGIIHDVSSTGATVFVEPQAVVEANAR 233

Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
            ++    E  E   IL   TA++A  E + +Y    +LEID+  A+A  A  +    P  
Sbjct: 234 ILQYRAQEAQEIERILVAFTAQVAAIEPQFQYSYKAMLEIDVLLAKARLALDLKAFKPA- 292

Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
                V  D S ++   +HPL+               +P K                   
Sbjct: 293 -----VRTDDSFSLIRARHPLI---------------DPKKC------------------ 314

Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
             VP+DI +  +   ++ITGPNTGGKT ++KT GL   M++ G  +PA     +  FD  
Sbjct: 315 --VPVDIALGRDYDSLIITGPNTGGKTVTLKTAGLLCAMAQCGFLIPADERSEICVFDEF 372

Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
           L DIGD QS+EQ+LSTFSGH+ +I  ILEL    +LVL+DE+G+GTDP+EG ALA +I++
Sbjct: 373 LVDIGDEQSIEQSLSTFSGHMKKITGILELAMPHTLVLLDELGAGTDPAEGAALAVAIIE 432

Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
            LR R  L + TTHYA+L     +     NA+ EF LETLRPTY++  G  G SNA  I+
Sbjct: 433 ELRRRGVLLMATTHYAELKVFALETKGVVNASCEFDLETLRPTYKLSVGVPGKSNAFLIS 492

Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
           + +G   ++I+ AQ                   Q L  E ++L++       L  ++   
Sbjct: 493 EKLGIPERVIEAAQ-------------------QHLSAEDKRLDAVLGQLDDLKLQL--- 530

Query: 579 YREIEDEAKDLDRRAAH-LKAKETQ------QVQQELNFAKVQIDTVVQDFENQ------ 625
            +E ++E ++L   A+H L+A + +      Q + EL  A+ +   + Q  E+Q      
Sbjct: 531 -KESQNEVEELKNEASHQLEAAQKKRDELIRQGENELEAARAKARALAQQVESQAYALTD 589

Query: 626 -LRDASADEINSL-----------IKESESAIAAIVEAHRPDDDFSVSETNTSSFTP--- 670
            LR    DE  S             KESE         H P             F P   
Sbjct: 590 ELRQLQKDERMSTQQKAQRAREIAKKESEKLFIGSEAVHNP----------VKEFVPLKE 639

Query: 671 -QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
            + G++V +  L ++LATV+ +P  +  VLV+ G ++ +V
Sbjct: 640 VKVGQEVCIAEL-NQLATVLALPDKNGDVLVRAGIIKTKV 678


>gi|423557869|ref|ZP_17534171.1| MutS2 protein [Bacillus cereus MC67]
 gi|401192406|gb|EJQ99422.1| MutS2 protein [Bacillus cereus MC67]
          Length = 786

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 210/696 (30%), Positives = 341/696 (48%), Gaps = 83/696 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + + AE +G  L    P+L
Sbjct: 65  LGGISDIRSNVKRAKIGSMLSPHELIEIASTMYGSRQMKRFIEDMAE-NGVEL----PIL 119

Query: 101 E-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 EGHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +    
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++++ ++    +      +HPL+               +P                  
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   +  F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SNA 
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            I+K +G   ++I RA+  +           K E   + +EE +K   + R  A  H + 
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546

Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
            + L+RE++ +  + +        K  ++ ++++  AK + + ++ +   QLR A    +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVNV 605

Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS---SFTPQFGEQVHVKSLGDKLA 686
             + LI+     E A   +V+  +      V+  NT+      P  G++V V + G K  
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK------VNVKNTAPKQQLRP--GDEVKVLTFGQKGQ 657

Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 658 LLKKV--SDTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|427414052|ref|ZP_18904242.1| MutS2 family protein [Veillonella ratti ACS-216-V-Col6b]
 gi|425714832|gb|EKU77834.1| MutS2 family protein [Veillonella ratti ACS-216-V-Col6b]
          Length = 791

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 198/655 (30%), Positives = 311/655 (47%), Gaps = 81/655 (12%)

Query: 96  YSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 154
           + PLL L +++      LE K     D K   ++D AS  L+ +R+   R  E + S L+
Sbjct: 110 HYPLLSLWIQDMPRHDGLERKFERVFDKKG-NLMDSASPKLQHLRSTIVRTKERIKSDLQ 168

Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
            +           + ++T+R +R  + +K  ++Y   +G+  + S++GAT ++EP   V 
Sbjct: 169 AIMHDPNNQKYFQEAIVTQRNNRYVIPVKQEYRYAF-EGLIHDRSATGATLYIEPMRLVN 227

Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
            NN       +E  E   I   L+  + K    +    +RV  ++  + +A  A  M GV
Sbjct: 228 LNNDLQEAELAEEEEVRRIYRELSQAVRKDSNTLMDACERVSHVEFVYGKANLAIKMKGV 287

Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
              LS    V   ++      +HPL+                P+                
Sbjct: 288 PAELSGGREVKLLNA------RHPLI----------------PV---------------- 309

Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
              +  VP  I +    R+++ITG NTGGKT +MKTLGL SLM++AGL++PA     LP 
Sbjct: 310 ---NVVVPTTITLGTNYRILLITGSNTGGKTVAMKTLGLLSLMNQAGLFIPADTGSILPI 366

Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
           F+ I ADIGD QS+E +LSTFS H++++V IL++   + LVL+DE+GSGTDP EG ALA 
Sbjct: 367 FNNIYADIGDEQSIEASLSTFSAHMTQVVKILKVAGAKDLVLLDELGSGTDPEEGSALAV 426

Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
           ++L+Y R R  L +V+THY +L          EN   EF   TLRPTYR+  G  G S+A
Sbjct: 427 ALLEYFRKRGPLMMVSTHYNELKRYAYHTDGIENGHVEFDERTLRPTYRLHIGVAGSSHA 486

Query: 515 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS-LMEERRKLESQARTAASLHA 573
           L+IA  +G  R++I  A++       E   +R  E   S L E+ RK + + R       
Sbjct: 487 LSIAARLGVPREVIDYAKQA-----HEGSANRDMETVLSDLNEQLRKNQERERILKKELD 541

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
           E   +  + E E K L+ R   + AK   + QQ     +V+ + ++++ ++Q  +A  D+
Sbjct: 542 EARRMRTQAEREKKQLNERRKQILAKAQNEAQQLKQSIRVEGEQIIKELKSQFSEADKDK 601

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP------QFGEQVHVKSLGDKLAT 687
             + I ++   I+ +          +V E      TP      + G+ V V SL + + T
Sbjct: 602 RQNAITKARKDISGV----------NVPELERDERTPVNVKELKEGQTVFVVSL-NAVGT 650

Query: 688 VVEVPGDDDTVLVQYGKMRV---------RVKKNNIRPIPNSKRKNAANPAPRLR 733
           V  V G    V V      V         R + NN+R     +++ A  P PR R
Sbjct: 651 VTAVQGKRIQVAVNGLTANVKAADLAVASREETNNLR-----RKETAVQPKPRKR 700


>gi|419858984|ref|ZP_14381641.1| MutS family ATPase [Oenococcus oeni DSM 20252 = AWRIB129]
 gi|410497345|gb|EKP88819.1| MutS family ATPase [Oenococcus oeni DSM 20252 = AWRIB129]
          Length = 795

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 201/727 (27%), Positives = 362/727 (49%), Gaps = 84/727 (11%)

Query: 23  LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           LL+QTS AL + + +  L +    D+  I        +L  SE+  ++ +L++   +   
Sbjct: 46  LLDQTSDALLIDRRRGGLPIRKTNDLTEIFKRLKLKAVLGTSELADLKSSLQSGQEISDF 105

Query: 82  L-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
           + T   E+  ++L++   +L ++      + L +++   +D +   +LD ASE+L  IR 
Sbjct: 106 IATIKDEIWSENLRQ---ILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHIRK 161

Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
                  N+ +LL K+      A  + +P+I+ R   + + +K+ ++     G+  + S 
Sbjct: 162 NISTTQNNVRTLLVKMTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQSQ 219

Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
           SG T ++EP+  V+ NN    L  ++I E  +IL  ++ ++     ++K   D + E+DL
Sbjct: 220 SGLTLYIEPQATVDLNNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGELDL 279

Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
             A+A  A  M+ + P      H++ +  I+++  +HPLL   S                
Sbjct: 280 IQAKAKLANSMNAIKP------HLNDEKVIDLKNARHPLLASDS---------------- 317

Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
                               V  DI++  +   ++ITGPNTGGKT  +KTLGL  LM++ 
Sbjct: 318 --------------------VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMAQT 357

Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
           G+++ A +   +  F+ I ADIGD QSLEQ+LSTFS H+  I +IL+   R SLVL+DE+
Sbjct: 358 GIFITAGSDSSIYVFNNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLDEL 417

Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
           G+GTDP EG ALA +I++ L  R  L ++TTHY +L    D+     NA+ EF   T  P
Sbjct: 418 GAGTDPGEGAALAMAIVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTFSP 477

Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
           TYR+L G  G SNA+ I++ +GF+  I++ A+  V+   P+ Q+   + L + L+ +RR 
Sbjct: 478 TYRLLLGVPGQSNAIAISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQRRD 532

Query: 561 L---ESQARTAAS--------LHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQVQQ 606
           L   ES+ R   S        L+ ++ +  +    E  D   +A H+ +   +E++Q+  
Sbjct: 533 LSKEESELRNQLSRAEQERKQLNQQLNEFEQNKAKEIMDAKNKANHIVSSVRQESKQLLD 592

Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
           ++   +++  +     E QL+   AD+I+ L +++      +++  +    F V      
Sbjct: 593 QIRRERLKAGSSTGKNEQQLKKI-ADQIDDLHQDTSLEKNRVLKRAKSAKQFRV------ 645

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
                 GE+V V S      T+++   + +   VQ G +++ V +N++  +   + K   
Sbjct: 646 ------GEEVMVSSYHQS-GTIIDKISNHEWQ-VQLGILKMNVDENDLEKLSTDQEKKIN 697

Query: 727 NPAPRLR 733
            P  R++
Sbjct: 698 EPVHRVK 704


>gi|377809473|ref|YP_005004694.1| mutS2 family protein [Pediococcus claussenii ATCC BAA-344]
 gi|361056214|gb|AEV95018.1| mutS2 family protein [Pediococcus claussenii ATCC BAA-344]
          Length = 786

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 193/681 (28%), Positives = 343/681 (50%), Gaps = 65/681 (9%)

Query: 51  LNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLT 110
           +++ ++GQ LS  +I  V RT R V + +  L    +LD   L + S   EL+     + 
Sbjct: 80  IDAVLNGQELS--QIGNVLRTTRNVTDFFSDLENDDQLDMRILDQTSQ--ELVT----VP 131

Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL 170
           ++E+++   ++    +  + AS DL  +R+   R    +   ++K+  +   A  + +P+
Sbjct: 132 DVEQRLSRSLEGNGHLT-NAASPDLAYLRSTITRIENEIRQKMEKLT-RGNNAKYLSEPI 189

Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
           +T R  R  + +K  ++  L  G+  + S+SG T ++EP+  VE NN ++R +   +  E
Sbjct: 190 VTIRNERFVLPVKTEYRSKLG-GVVHDQSASGQTLYIEPEAVVELNN-DLRQNQVAVVHE 247

Query: 231 TAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
              +    +E+    R+     D +L   DL  A+A +A        I +++  +S D+ 
Sbjct: 248 EQRIFQELSELVAPHRDTLKQNDHILGHFDLLNAKARYA------AKIKATEPKISEDNQ 301

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
           IN+   +HPL+                       + +  VG+            DI++  
Sbjct: 302 INLRKARHPLI-----------------------DPKRVVGN------------DIRLGK 326

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
           + + ++ITGPNTGGKT S+KT+GL  LM ++G+++PA  +  +  FD I ADIGD QS+E
Sbjct: 327 DFKTLIITGPNTGGKTISLKTVGLLQLMGQSGIFIPANENSTIGIFDEIFADIGDEQSIE 386

Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
           QNLSTFS H+  I+ IL  +   SLVL DE+G+GTDP EG ALA +IL  +R+   L + 
Sbjct: 387 QNLSTFSSHMDNIIHILAQIDNNSLVLFDELGAGTDPKEGAALAIAILDDVRNHASLVMA 446

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTHY +L     + +   NA+ EF++ETL+PTY++L G  G SNA +I+  +G D ++I 
Sbjct: 447 TTHYPELKTYGYERSETINASMEFNVETLKPTYKLLIGIPGQSNAFDISSRLGLDNRLIS 506

Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
           +A+ LV     ++     + + + L + +RK++       +   +     + I DE   L
Sbjct: 507 QARDLV-----DQDSQDLNNMIKDLTDRQRKVDKLYDQLDNTVGQASGYQKTIVDELNTL 561

Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI- 648
           + R A L  +  ++  + ++ +K + D +++          A   N LI E++S I A+ 
Sbjct: 562 NNRRAQLLEQAKEEANRIVDNSKSEADGIIKRLRKMESAGVAFRENDLI-EAKSNINALR 620

Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
            E++   +       N  +F     ++V V S G +   + +V  DD    VQ G ++++
Sbjct: 621 QESNLKRNKVLRRAKNKQTF--HVNDEVIVSSYGQRGELLRKV--DDKHWEVQMGIIKMK 676

Query: 709 VKKNNIRPIPNSKRKNAANPA 729
           V  + +  +   K K  ++ A
Sbjct: 677 VSTDEMEKVDPEKSKPVSHRA 697


>gi|416999068|ref|ZP_11939737.1| putative recombination and DNA strand exchange inhibitor protein
           [Veillonella parvula ACS-068-V-Sch12]
 gi|333977221|gb|EGL78080.1| putative recombination and DNA strand exchange inhibitor protein
           [Veillonella parvula ACS-068-V-Sch12]
          Length = 812

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 167/572 (29%), Positives = 281/572 (49%), Gaps = 58/572 (10%)

Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
           +IT+R +R  + +K  ++    DG+  + S++G T ++EP   V  NN    L  + I E
Sbjct: 204 IITQRNNRYVIPVKQEYRQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGE 259

Query: 230 ETAILSL---LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
           E  +L +   L+A + +   ++    ++V  I+  + +A  A    GV  ILS+      
Sbjct: 260 EQEVLRIYRELSALVKQHSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------ 313

Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
           D ++N+   +HPL+                P                    +  VP +I+
Sbjct: 314 DRTVNLMRARHPLI----------------P-------------------PNVVVPTNIQ 338

Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
           +    R+++ITG NTGGKT S+KTLGL SLM++ GL++PA +   LP F  I ADIGD Q
Sbjct: 339 LGTSYRILLITGSNTGGKTVSLKTLGLLSLMNQCGLFIPADHGSMLPIFQNIFADIGDEQ 398

Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
           S+E +LSTFS H+++++ I++      LVL+DE+GSGTDP EG ALA SIL++ R +  L
Sbjct: 399 SIEASLSTFSAHMTQVISIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGAL 458

Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
            +V+THY +L          EN   EF   TL+PTYR+  G  G S+AL+IA  +G  + 
Sbjct: 459 MMVSTHYNELKNYAYHTEGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKD 518

Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
           I+ RA +     + +   H   E+   L E+ RK   + R       E   +  ++E E 
Sbjct: 519 IVTRAAE----YKSQFGSHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEK 574

Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 646
           K  + +   +  K     +      +V+ + +++  ++Q  + + D+  S I  +   I+
Sbjct: 575 KQFNEKRKQILTKAQADAESMKRSLRVEGEAIIKQLKSQFSETNKDKRQSAINAARKGIS 634

Query: 647 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
            +   H P+        + ++ T + G+ V+V SL   L TV+ + G+   V +      
Sbjct: 635 NV---HIPESPVDDDRKSLTADTIKVGQAVYVTSL-RSLGTVLAINGNRVNVDINGLTAT 690

Query: 707 VRVK--KNNIRPIPNSKRKNAANPAPRLRKQV 736
           V+V   ++  R   N   +      P+ RK++
Sbjct: 691 VKVSELQSTTREEGNKLEREQKAAMPKTRKRM 722


>gi|335047142|ref|ZP_08540163.1| recombination and DNA strand exchange inhibitor protein [Parvimonas
           sp. oral taxon 110 str. F0139]
 gi|333760950|gb|EGL38505.1| recombination and DNA strand exchange inhibitor protein [Parvimonas
           sp. oral taxon 110 str. F0139]
          Length = 629

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 183/579 (31%), Positives = 287/579 (49%), Gaps = 84/579 (14%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQL 59
           +G   ++ ++I    +L E Q+LL++T  A   +    L  +S I+D+         GQ 
Sbjct: 26  IGKKTIKNSEI--SSNLIEVQRLLDETDEAYRFIIKHRLPGISNIDDLEEDFKLLEIGQY 83

Query: 60  LSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
            SP  +  V + L   R + N+  +  E++E        +  + EL+ + N  T+LE+ I
Sbjct: 84  FSPKNLLEVWKLLNTSRFLKNIISE-EESSE--------FKNIFELINSLNIATQLEKDI 134

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRR 175
              I  +  I  D AS DL+ IR    R +++ + L++ K+   I  +  +   L T R 
Sbjct: 135 EMSIISENEI-SDDASSDLKRIR----RMIKSKNDLIRDKLNQLISTSDKLMDNLYTLRD 189

Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
            R  V +++  K     GI  + S+SG T F+EP   V+ NN    L   EI EE  I  
Sbjct: 190 GRYVVPVRSEFKNSFK-GIVHDQSASGQTVFIEPMFVVDLNN---DLKKLEIDEEKEIER 245

Query: 236 LLTAEIAKSEREIKYL------MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
           +L   IA S R ++ L      +  + +ID  F+R   A  M+ + PI++++  +S  S+
Sbjct: 246 IL---IAFSSRVLEILPELISNLSVIAKIDFIFSRGKLAYDMEAIKPIINNRGIISLQSA 302

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
                 +HPL+                                     D  VPIDI +  
Sbjct: 303 ------RHPLI-----------------------------------DRDKVVPIDISLGN 321

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
               +VITGPNTGGKT ++KT+G+ +LM++ GL +P  ++  +  FD + ADIGD QS+E
Sbjct: 322 SFNTLVITGPNTGGKTVTLKTVGILTLMTQYGLMIPCADNSEVAVFDELFADIGDEQSIE 381

Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
           Q+LSTFS H+  I++I++     SL+L DE+GSGTDP EG  L+ SIL Y   R    + 
Sbjct: 382 QSLSTFSSHMKNIIEIIKNAKENSLILFDELGSGTDPEEGSGLSISILNYFLGRNIRTIA 441

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTHY+ L          +NAA EF +E L PTY+++ G +G SNA  I+K +G D   I 
Sbjct: 442 TTHYSQLKMYAMSTENVQNAAMEFDVEKLEPTYKLIIGISGKSNAFEISKKLGLDESFIV 501

Query: 530 RAQKLV-------ERLRPERQQHRKSELYQSLMEERRKL 561
            A+K +       ++L       RK   Y+ L+ E+R++
Sbjct: 502 NAKKFISNNELSFDKLVSNVDNRRKE--YEDLIIEQREI 538


>gi|70726818|ref|YP_253732.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus haemolyticus JCSC1435]
 gi|82592981|sp|Q4L5E9.1|MUTS2_STAHJ RecName: Full=MutS2 protein
 gi|68447542|dbj|BAE05126.1| MutS-like protein [Staphylococcus haemolyticus JCSC1435]
          Length = 783

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 188/604 (31%), Positives = 299/604 (49%), Gaps = 78/604 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  I+ +++ A  G +L+ +E+  V+R ++ V N +K        + + + +Y  L 
Sbjct: 65  LSGLAKISPLIHRANIGGVLNVTELNLVKRLIQ-VQNQFKTFYNQLLEEDEQVVKYPILN 123

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
           + +     L++L ++I    D   L   D AS +L+ IR++     +R  +NLD ++K  
Sbjct: 124 DKMNQLPILSDLFQEINEKCDTHDL--YDSASYELQGIRSKISSTNQRIRQNLDRIVKSQ 181

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
           A Q      +   +IT R  R  + +KA ++     GI  + S+SG T ++EP   VE N
Sbjct: 182 ANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEMN 236

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
           N   RL N E  E   IL+ LT  +A +E +   + + V+ +ID   A+A +A+ + G  
Sbjct: 237 NQISRLRNDEAVERERILTELTGMVA-AEADGCLIAESVMGQIDFLTAKARYARSIKGTK 295

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P          D ++ +    HPLL                       N +  V +  + 
Sbjct: 296 PTFYK------DRTVYLPNAYHPLL-----------------------NKDTVVANTIEF 326

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
           + D               V+ITGPNTGGKT ++KTLGL  +M+++GL +P  +  +L  F
Sbjct: 327 VDDI------------ETVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 374

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           + +  DIGD QS+EQ+LSTFS H+  IV+IL+   + SLVL DE+G+GTDPSEG ALA S
Sbjct: 375 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQETDKNSLVLFDELGAGTDPSEGAALAMS 434

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL ++R+   L + TTHY +L           NA+ EF + TL PTY++L G  G SNA 
Sbjct: 435 ILDHVREIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 494

Query: 516 NIAKSIGFDRKIIQRAQ-----------KLVERLRP--ERQQHRKSELYQSLMEERRK-- 560
           +I++ +G    II +A+            ++E L    +R   ++ EL + L E R+   
Sbjct: 495 DISRKLGLSLGIINKAKTMIGTDEQEINSMIESLEKNSKRVDEQRIELDRLLKEARKTHD 554

Query: 561 -LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 619
            LE Q     S   ++M       DEAK+   +      KE   + +EL   + Q    V
Sbjct: 555 DLEHQYEQYKSYEKKLM-------DEAKEKANQRVKSATKEADSILKELRTLRDQKGADV 607

Query: 620 QDFE 623
           ++ E
Sbjct: 608 KEHE 611


>gi|270290964|ref|ZP_06197187.1| MutS2 protein [Pediococcus acidilactici 7_4]
 gi|270280360|gb|EFA26195.1| MutS2 protein [Pediococcus acidilactici 7_4]
          Length = 785

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 162/494 (32%), Positives = 255/494 (51%), Gaps = 48/494 (9%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           +EDI   L        L+  EI  + R LRA   V     +      D+      L  ++
Sbjct: 68  LEDIDEPLQRLKIDATLNGREIAQIGRVLRATREVINFFADLP----DTEVTVETLNGVV 123

Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
                + E+EE++   I+    + L+ AS +L  IRA   R    +   ++K   +  QA
Sbjct: 124 DQLETIPEIEERLNSSIEGNGHL-LNSASSELRRIRAAITRVEGEIRQRMEKFT-RGSQA 181

Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
             + +P++T R  R  + ++A  +     G+  + SSSG T ++EP+  V+ NN   +  
Sbjct: 182 KYLSEPIVTIRSERYVIPVRADSRSRF-GGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQ 240

Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
            +E+ EE  IL  L+A IA     +K     +  +DL  A+A +A  +    P       
Sbjct: 241 VAEVHEEQRILQELSALIAPYADTLKDNSKVLGHLDLLNAKAQYAHKLKATEP------Q 294

Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
           +S ++ IN+   +HPL+               +P K                     VP 
Sbjct: 295 ISTNNRINLRQARHPLI---------------DPKKV--------------------VPN 319

Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
           DI++  E   +VITGPNTGGKT ++KT+GL  LM+++G+++PA  +  +  F+ I ADIG
Sbjct: 320 DIRLGGEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGIFIPANENSTVRVFEEIFADIG 379

Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
           D QS+EQNLSTFS H+   + ILE ++  SL L DE+G+GTDP EG ALA +IL  +R R
Sbjct: 380 DEQSIEQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGTDPKEGAALAIAILDRVRQR 439

Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
             +++ TTHY +L     + +   NA+ EF ++TL+PTY++L G  G SNA  I++ +G 
Sbjct: 440 GAVSITTTHYPELKTYGYERSGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISRRLGL 499

Query: 524 DRKIIQRAQKLVER 537
           D  II +A+ LV++
Sbjct: 500 DEDIITQARGLVDQ 513


>gi|163942283|ref|YP_001647167.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           weihenstephanensis KBAB4]
 gi|229486366|sp|A9VJL2.1|MUTS2_BACWK RecName: Full=MutS2 protein
 gi|163864480|gb|ABY45539.1| MutS2 family protein [Bacillus weihenstephanensis KBAB4]
          Length = 786

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 210/698 (30%), Positives = 341/698 (48%), Gaps = 87/698 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  L    P+L
Sbjct: 65  LGGISDIRANIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +    
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++++ ++    +      +HPL+               +P                  
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   +  F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SNA 
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
            I+K +G   ++I RA+  +  +  + E    +  E  ++   ER++ E   + +  LH 
Sbjct: 493 EISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHR 552

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
           E+     E  DE     R    LKA+  ++ ++++  AK + + ++Q+   QLR A    
Sbjct: 553 ELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKQEAEGIIQEL-RQLRKAQLIN 604

Query: 634 I--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDK 684
           +  + LI+     E A   +V+  +          N  +  P+     G++V V + G K
Sbjct: 605 VKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFGQK 655

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
              + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 656 GQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|357147017|ref|XP_003574192.1| PREDICTED: LOW QUALITY PROTEIN: mutS2 protein-like [Brachypodium
           distachyon]
          Length = 833

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 219/765 (28%), Positives = 365/765 (47%), Gaps = 85/765 (11%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIA--GILNSAVSGQLLSPSEICAVRRT 71
           S E S++LL +T AA+ ++ +     D S ++ +     +     G ++   E  AV   
Sbjct: 79  SYERSRRLLQETEAAVRLLGTSGGSFDFSGLDTVTVEAAIQCVSGGSVIKGQEAMAVVSL 138

Query: 72  LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
           +  V ++   +  A   D +S     PL E +        L + I   ID     + D A
Sbjct: 139 MLFVESLQVTIRAAMRQDEESHNLLMPLTETILEAVVNKSLVKSIQDIIDDDG-SVKDTA 197

Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL--ITKRRSRMCVGIKASHKYL 189
           S +L   R +    +++L+S L ++  ++ +    +  L  ++    R C+ +    K L
Sbjct: 198 SPELRRYREQ----VQSLESRLCQLMDRLIRNSDSEASLSEVSIVNGRCCIKVTGD-KSL 252

Query: 190 LPDGIALNVS-----SSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAK 243
             DG+ L+        S A   +EP  AV  N+ E++ + + +A  E   LS LT +I  
Sbjct: 253 SFDGLLLSRCVYXRCGSDAGSMIEPIVAVPLND-ELQGARALVARAELDALSKLTDKILL 311

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL------------SSQSHVSFDSS-- 289
               I+ L+   + +D   ARA ++   DG  P L            ++   VS  SS  
Sbjct: 312 ELDNIQILLQETITLDKVTARAKYSIAYDGTLPDLYLPKFEHETVNTATDWPVSATSSAQ 371

Query: 290 -------INIEGIKHPLLLGSSLRSL-----SAASSNS---------------NPLKSDV 322
                  + I    HPLLL     +L       AS+ +               + L SD+
Sbjct: 372 LPKKPWKVFIPNAFHPLLLQQHQENLRRIKKDVASATAEIRRRRIYGQDIAEEDQLASDL 431

Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
           ++ +  V  L +   + P+P+D  +  ET V+VITGPNTGGKT S+KT+GLASLM+K GL
Sbjct: 432 DSMKNRVSKLER---NHPIPVDFMIGEETTVLVITGPNTGGKTISLKTVGLASLMAKIGL 488

Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
           Y+ A    ++PWFD + ADIGD QSL Q+LSTFSGH+ +I  I    + +SLVL+DE+G+
Sbjct: 489 YILASEPVKIPWFDAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAQSTSQSLVLLDEVGA 548

Query: 443 GTDPSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 501
           GT+P EG AL  S+L+   +    L + TTH+ +L  LK  +  FENA  EF  E L+PT
Sbjct: 549 GTNPLEGAALGMSLLESFAEAGSFLTLATTHHGELKTLKYSNDSFENACVEFDEENLKPT 608

Query: 502 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 561
           +RILWG  G SNA+NIA+ +G    II+ A+ L+     E      + L   + + +++ 
Sbjct: 609 FRILWGIPGRSNAINIAERLGLPLDIIESARHLLGTAGAE-----INALIMDMEKFKQEY 663

Query: 562 ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQD 621
           + Q + A     +  +L+  +E   K++       + ++++ V +    A+  I    Q 
Sbjct: 664 DEQLQQAQHYLMQSRELHNNLEVAQKNVMDHTIAQRKRKSRVVSEYAVMARSIIHKKFQQ 723

Query: 622 F------------ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
           F            E  +  A ++ +        S+ +AI  A   +   +    +     
Sbjct: 724 FRESAIAQRVLEEERAVEKAKSERVKG---PEPSSTSAIKMAQNTNSSMATEANDEDGGI 780

Query: 670 PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
           P+ G+ V+V  L ++ ATVV++    + V +Q G M++++K  ++
Sbjct: 781 PEVGDLVYVPKLKNQ-ATVVKIDSSKNEVQIQAGMMKLKLKLKDV 824


>gi|423484112|ref|ZP_17460802.1| MutS2 protein [Bacillus cereus BAG6X1-2]
 gi|401139138|gb|EJQ46701.1| MutS2 protein [Bacillus cereus BAG6X1-2]
          Length = 786

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 212/699 (30%), Positives = 341/699 (48%), Gaps = 89/699 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  E +G  L    P+L
Sbjct: 65  LGGISDIRSNVKRAKIGSMLSPHELIEIASTMYGSRQMKRFIEDMVE-NGVEL----PIL 119

Query: 101 -ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
              +     L +LE+KI  CI     + LD AS+ L  IR +      R  E L+S+ + 
Sbjct: 120 VGHVAQIISLYDLEKKITNCIGDGGEV-LDSASDKLRGIRNQIRTAESRIREKLESMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +    
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++++ ++    +      +HPL+               +P                  
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   +  F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILERADFESLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SNA 
Sbjct: 433 ILDEVYNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            I+K +G   ++I RA+  +           K E   + +EE +K   + R  A  H + 
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546

Query: 576 MD-LYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 632
            + L+RE++ +  +   DR    LKA+  ++ ++++  AK + + ++ +   QLR A   
Sbjct: 547 SEKLHRELQRQIIEFNDDRDERLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQLA 603

Query: 633 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 683
            +  + LI+     E A   +V+  +          N  +  P+     G++V V + G 
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 655 KGQLLKKVS--DTEWNVQIGILKMKVKESNMEYINTPKQ 691


>gi|418069516|ref|ZP_12706793.1| MutS family ATPase [Pediococcus acidilactici MA18/5M]
 gi|357536047|gb|EHJ20078.1| MutS family ATPase [Pediococcus acidilactici MA18/5M]
          Length = 785

 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 162/494 (32%), Positives = 255/494 (51%), Gaps = 48/494 (9%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           +EDI   L        L+  EI  + R LRA   V     +      D+      L  ++
Sbjct: 68  LEDIDEPLQRLKIDATLNGREIAQIGRVLRATREVINFFADLP----DTEVTVETLNGVV 123

Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
                + E+EE++   I+    + L+ AS +L  IRA   R    +   ++K   +  QA
Sbjct: 124 DQLETIPEIEERLNSSIEGNGHL-LNSASSELRRIRAAITRVEGEIRQRMEKFT-RGSQA 181

Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
             + +P++T R  R  + ++A  +     G+  + SSSG T ++EP+  V+ NN   +  
Sbjct: 182 KYLSEPIVTIRSERYVIPVRADSRSRF-GGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQ 240

Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
            +E+ EE  IL  L+A IA     +K     +  +DL  A+A +A  +    P       
Sbjct: 241 VAEVHEEQRILQELSALIAPYADTLKDNSKVLGHLDLLNAKAQYAHKLKATEP------Q 294

Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
           +S ++ IN+   +HPL+               +P K                     VP 
Sbjct: 295 ISTNNRINLRQARHPLI---------------DPKKV--------------------VPN 319

Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
           DI++  E   +VITGPNTGGKT ++KT+GL  LM+++G+++PA  +  +  F+ I ADIG
Sbjct: 320 DIRLGGEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGMFIPANENSTVRVFEEIFADIG 379

Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
           D QS+EQNLSTFS H+   + ILE ++  SL L DE+G+GTDP EG ALA +IL  +R R
Sbjct: 380 DEQSIEQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGTDPKEGAALAIAILDRVRQR 439

Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
             +++ TTHY +L     + +   NA+ EF ++TL+PTY++L G  G SNA  I++ +G 
Sbjct: 440 GAVSITTTHYPELKTYGYERSGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISRRLGL 499

Query: 524 DRKIIQRAQKLVER 537
           D  II +A+ LV++
Sbjct: 500 DEDIITQARGLVDQ 513


>gi|363893691|ref|ZP_09320786.1| hypothetical protein HMPREF9629_01112 [Eubacteriaceae bacterium
           ACC19a]
 gi|361963493|gb|EHL16565.1| hypothetical protein HMPREF9629_01112 [Eubacteriaceae bacterium
           ACC19a]
          Length = 785

 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 186/633 (29%), Positives = 306/633 (48%), Gaps = 84/633 (13%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           I D AS DL  IR +     +N+ + L +  +    +  +   ++T R  R  V +K+ +
Sbjct: 142 ISDDASADLRRIRRQINSEKQNIKNKLNEFVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           +   P GI  + SSSGAT F+EP   V  NN    L   E  E   IL+ LT+ + +   
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           +I +  D + ++D   A+   +  M+ + P ++ + ++   ++      +HPL+      
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKLINA------RHPLIE----- 309

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                       K  V +S + +G                   E   ++ITGPNTGGKT 
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KTLGL SLM +AGL++P      +  FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           + V   SLVL DE+G+GTDP EG  LA SIL+ L+ +  L V TTHY++L          
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILEKLKSKNILTVATTHYSELKNYALTQENV 459

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV----------- 535
            NA+ EF + TL PTY++L G  G SNA  I+K +G   +II  A++ +           
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIKTDSIQMEDVI 519

Query: 536 ---ERLRPERQQHRKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYREIEDEAKD 588
              E++R + +  +K E  Q  +E+    R KLE++ +     + ++      IED AK+
Sbjct: 520 SKLEKIRTDYE--KKQEELQKELEDVKYIRLKLENKEQRQKEQNKKL------IED-AKE 570

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
             R+       E   + + LN  K++  +  ++ + Q+ +   +      K ++S    I
Sbjct: 571 KARKLIEDAKSEADIISKNLN--KIKNSSDYKNIDRQMNELKTNINKYKEKYAKSKEELI 628

Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
            ++ +P ++ +V            G+ V+V S   K A V+ V    D VL++ G +++ 
Sbjct: 629 AKSSKPLENINV------------GDIVYVNSFA-KNAKVLSVDDAKDEVLIELGAIKMT 675

Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQVCTCTS 741
           VKK N+      K K +      L  +  T  +
Sbjct: 676 VKKENLSTQEKIKEKKSTKAGKILTNKTKTAQT 708


>gi|304385233|ref|ZP_07367578.1| DNA mismatch repair protein MutS [Pediococcus acidilactici DSM
           20284]
 gi|304328440|gb|EFL95661.1| DNA mismatch repair protein MutS [Pediococcus acidilactici DSM
           20284]
          Length = 786

 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 162/494 (32%), Positives = 255/494 (51%), Gaps = 48/494 (9%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           +EDI   L        L+  EI  + R LRA   V     +      D+      L  ++
Sbjct: 69  LEDIDEPLQRLKIDATLNGREIAQIGRVLRATREVINFFADLP----DTEVTVETLNGVV 124

Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
                + E+EE++   I+    + L+ AS +L  IRA   R    +   ++K   +  QA
Sbjct: 125 DQLETIPEIEERLNSSIEGNGHL-LNSASSELRRIRAAITRVEGEIRQRMEKFT-RGSQA 182

Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
             + +P++T R  R  + ++A  +     G+  + SSSG T ++EP+  V+ NN   +  
Sbjct: 183 KYLSEPIVTIRSERYVIPVRADSRSRF-GGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQ 241

Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
            +E+ EE  IL  L+A IA     +K     +  +DL  A+A +A  +    P       
Sbjct: 242 VAEVHEEQRILQELSALIAPYADTLKDNSKVLGHLDLLNAKAQYAHKLKATEP------Q 295

Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
           +S ++ IN+   +HPL+               +P K                     VP 
Sbjct: 296 ISTNNRINLRQARHPLI---------------DPKKV--------------------VPN 320

Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
           DI++  E   +VITGPNTGGKT ++KT+GL  LM+++G+++PA  +  +  F+ I ADIG
Sbjct: 321 DIRLGGEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGIFIPANENSTVRVFEEIFADIG 380

Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
           D QS+EQNLSTFS H+   + ILE ++  SL L DE+G+GTDP EG ALA +IL  +R R
Sbjct: 381 DEQSIEQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGTDPKEGAALAIAILDRVRQR 440

Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
             +++ TTHY +L     + +   NA+ EF ++TL+PTY++L G  G SNA  I++ +G 
Sbjct: 441 GAVSITTTHYPELKTYGYERSGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISRRLGL 500

Query: 524 DRKIIQRAQKLVER 537
           D  II +A+ LV++
Sbjct: 501 DEDIITQARGLVDQ 514


>gi|387930060|ref|ZP_10132737.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           methanolicus PB1]
 gi|387586878|gb|EIJ79202.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           methanolicus PB1]
          Length = 785

 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 170/500 (34%), Positives = 253/500 (50%), Gaps = 57/500 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI      A  G  LSP E+  V  T+ A   + + + +  E   D      P+L
Sbjct: 65  LGGIFDIRPHTKRAAIGGSLSPHELIQVASTVHASRQLKRFIEDLNEETNDL-----PIL 119

Query: 101 -ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSLLKK 155
            + ++    L ELEE I   ID +   +LD ASE L    + +R +  R  E L+S+++ 
Sbjct: 120 AKYVERIIVLAELEEAIKHAID-ESGEVLDGASETLRSLRQQLRTKEARVRERLESMIRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++     GI  + SSSG T F+EP+  V+ 
Sbjct: 179 SNAQKMLSDAI----VTIRNDRFVIPVKQEYRTYY-GGIIHDQSSSGQTLFIEPQAIVQL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL  L+ ++ +   E++ ++  + E+D  FA+A ++  +    
Sbjct: 234 NNDLQATRVKEQQEIERILHELSQKVGEYSGELETIVLVLAELDFMFAKARYSSKIKASK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           P+++++  +S   +      +HPL+                P+                 
Sbjct: 294 PLMNNEGRISLIKA------RHPLI----------------PI----------------- 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             D  VP DI +  +   +VITGPNTGGKT ++KT+GL +LM+++GL +PA +   +  F
Sbjct: 315 --DEVVPNDISLGKDFSTIVITGPNTGGKTVTLKTVGLCTLMAQSGLQIPALDGSEMAVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             + ADIGD QS+EQ+LSTFS H+  IVDIL  V   SLVL DE+G+GTDP EG ALA S
Sbjct: 373 GSVYADIGDEQSIEQSLSTFSSHMVNIVDILNKVDFNSLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  +  R    + TTHY +L           NA+ EF +ETL PTY++L G  G SNA 
Sbjct: 433 ILDEVYKRGAKVIATTHYPELKVYGYNREGVINASVEFDIETLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLV 535
            I+K +G D K+I  A+  V
Sbjct: 493 EISKRLGLDEKVINNARSYV 512


>gi|423368579|ref|ZP_17346011.1| MutS2 protein [Bacillus cereus VD142]
 gi|401080105|gb|EJP88395.1| MutS2 protein [Bacillus cereus VD142]
          Length = 786

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 208/699 (29%), Positives = 342/699 (48%), Gaps = 89/699 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  L    P+L
Sbjct: 65  LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
           NN   E R+   +  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +  
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291

Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
             PI++++ ++    +      +HPL+               +P                
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314

Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
               +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   + 
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370

Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
            F  I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430

Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
            SIL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490

Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
           A  I+K +G   ++I RA+  +           K E   + +EE +K   + R  A  H 
Sbjct: 491 AFEISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHR 544

Query: 574 EIMD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 632
           +  + L+RE++ +  + +        K  ++ ++++  AK + + ++Q+   QLR A   
Sbjct: 545 KQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKQEAEGIIQEL-RQLRKAQLI 603

Query: 633 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 683
            +  + LI+     E A   +V+  +          N  +  P+     G++V V + G 
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFGQ 654

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
           K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|256545517|ref|ZP_05472877.1| DNA mismatch repair protein MutS [Anaerococcus vaginalis ATCC
           51170]
 gi|256398728|gb|EEU12345.1| DNA mismatch repair protein MutS [Anaerococcus vaginalis ATCC
           51170]
          Length = 781

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 220/753 (29%), Positives = 355/753 (47%), Gaps = 111/753 (14%)

Query: 16  SLEESQKLLNQTSAAL-AMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           +++E +  L++T A    ++++  +D+  + D+  I+       +L P E+  V   LR 
Sbjct: 39  NIKEIKDELDKTKAMEEVIVENGNIDIFGLFDLKEIIEYVRKKGILEPFELLKVLDLLR- 97

Query: 75  VNNVWKKLTEAAELDGDSLQRY-SPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
           V+N  K+  E  E        Y   L + +   +F+ +  E+     D     I D AS 
Sbjct: 98  VSNYLKEYGENIE------NPYIKDLFDRISVNDFIKDEIERSIISEDE----IADNASA 147

Query: 134 DLELIRAE-RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
           +L  IR +  K+  E  + L   +++  F     DK +++ R  R  + +K + K +L +
Sbjct: 148 NLRSIRKKIGKKEAEIKNKLSFYISSPKFDESLQDK-VVSIRDGRYVLPVKTNKKSVL-N 205

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIK 249
           GI  + S SG T F+EP   VE NN    LSN +I E   I   L  L+  +   ++EI 
Sbjct: 206 GIIHDRSQSGNTLFIEPNAIVELNN---DLSNLQIEESDEIRRILDRLSRFVEGFDQEIL 262

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
                +  ID   A+  +    +   P L+ +        IN++  +HPLL G+      
Sbjct: 263 ENQKLIQRIDFLQAKVKYFLAHEYTMPKLTDKK------IINLKSARHPLLKGNV----- 311

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                                          VPID+K+    + ++ITGPNTGGKT S+K
Sbjct: 312 -------------------------------VPIDVKIGDGYKTLIITGPNTGGKTVSLK 340

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+GL SLM++AG Y+P      +  FD I  DIGD QS+E +LSTFS  ++ IV I E V
Sbjct: 341 TVGLVSLMAQAGFYIPCDEDSVVNVFDDIFLDIGDTQSIEMSLSTFSASLTNIVKITENV 400

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
           S  SLVL+DE+GSGTDP+EG ALA SIL++L+++  +   TTHY++L     +     NA
Sbjct: 401 SENSLVLLDEVGSGTDPTEGAALAISILEFLKNKNVMTFATTHYSELKYYALEKEGVMNA 460

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER--------LRPE 541
           + EF +E+L PTY+++ G+ G SNA  I+K +G D+KI+  A+ ++          L   
Sbjct: 461 SVEFDVESLSPTYKLIIGTPGKSNAFEISKRLGLDKKILANAKSILSDDNKNFNTILEQL 520

Query: 542 RQQHRKSELYQSLMEERRKLESQART-AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
            Q  ++ E+    +E+ +K   +AR    +L   I    +EI ++A+D   +A  +  + 
Sbjct: 521 DQNKKEMEIKNQEIEDYKKKIKKARNDLLALSENIKKQEKEIIEKAED---KANKILEEA 577

Query: 601 TQQVQQELNFAK-------VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
            +  Q  L  AK         ID  + D  N+ +D+  D    + KE  S  A       
Sbjct: 578 NKASQDMLKIAKKSKNGNTSDIDRSLNDIRNKYKDSKIDRQEEVFKEKISKNA------- 630

Query: 654 PDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
                           PQ    G+ V ++ L +K A V+E P +   + VQ G +++   
Sbjct: 631 ----------------PQNLKVGDVVLIEGLNEK-AQVIENPDEKGNIKVQMGILKMDSN 673

Query: 711 KNNIRPIP-NSKRKNAANPAPRLRKQVCTCTSL 742
             N+  I  N+K K   N   + +K +    +L
Sbjct: 674 IKNVTKIKSNNKTKENTNRIYKAKKAMHISPTL 706


>gi|423591474|ref|ZP_17567505.1| MutS2 protein [Bacillus cereus VD048]
 gi|401232842|gb|EJR39340.1| MutS2 protein [Bacillus cereus VD048]
          Length = 786

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 210/698 (30%), Positives = 341/698 (48%), Gaps = 87/698 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  L    P+L
Sbjct: 65  LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +    
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++++ ++    +      +HPL+               +P                  
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   +  F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SNA 
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
            I+K +G   ++I RA+  +  +  + E    +  E  ++   ER++ E   + +  LH 
Sbjct: 493 EISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHR 552

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
           E+     E  DE     R    LKA+  ++ ++++  AK + + ++Q+   QLR A    
Sbjct: 553 ELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKKEAEGIIQEL-RQLRKAQLIN 604

Query: 634 I--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDK 684
           +  + LI+     E A   +V+  +          N  +  P+     G++V V + G K
Sbjct: 605 VKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQK 655

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
              + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 656 GQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|398306013|ref|ZP_10509599.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           vallismortis DV1-F-3]
          Length = 785

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 210/730 (28%), Positives = 358/730 (49%), Gaps = 75/730 (10%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           S++E +K L++   A A+++ +       + DI G L  A  G +LSP+E   +   L A
Sbjct: 39  SIDEIKKQLDEVDEASAIIRLRGQAPFGGLVDIRGALRRAEIGSVLSPAEFTEISGLLYA 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
           V  +   +++ AE DG  +    PL+ +  +    L++LE  I  CID    + LD ASE
Sbjct: 99  VKQMKHFISQMAE-DGVDI----PLIHQHAEQLITLSDLERDINSCIDDHGEV-LDHASE 152

Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L  IR + +    R  + L+S+L+  +A       +   ++T R  R  + +K  ++  
Sbjct: 153 TLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
              GI  + SSSGAT F+EP+  V+ NN   +    E  E   IL +LT + A+   E+ 
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEQTAEHTEELF 267

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
             +  +  +D  FA+A +A+ +    P+++    V    +      +HPLL         
Sbjct: 268 QDLHVLQTLDFIFAKARYAKAVKATKPLMNDSGFVRLKKA------RHPLL--------- 312

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                  P +  V N                   DI++  +   +VITGPNTGGKT ++K
Sbjct: 313 -------PAEQVVAN-------------------DIELGGDFSTMVITGPNTGGKTVTLK 346

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           TLGL +LM+++GL++PA        F+ + ADIGD QS+EQ+LSTFS H+  IV ILE V
Sbjct: 347 TLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILEQV 406

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
           +  SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L           NA
Sbjct: 407 NENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTHYPELKAYGYNREGVMNA 466

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           + EF +ETL PTY++L G  G SNA  I+K +G    II +A+  +       + +    
Sbjct: 467 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAKSEM-----TAEHNEVDT 521

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
           +  SL + +++ E +     ++  E   L++E++ +  +L+ +   +  +  QQ  +++ 
Sbjct: 522 MIASLEQSKKRAEEELSETEAIRREADKLHKELQQQIIELNSKKDKMLEEAEQQAAEKVK 581

Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
            A  + + ++ +  +  ++  + + + LI  ++  +   V            +T   +F 
Sbjct: 582 AATKEAEDIIHELRSIKQEHRSFKDHELIN-AKKRLEGAVPTFEKSKKPEKPKTQKRNFK 640

Query: 670 PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA 729
           P  G++V V + G K  T++E  G  +   VQ G ++++VK+ ++  I ++       P 
Sbjct: 641 P--GDEVKVLTFGQK-GTLLEKTGGSEWN-VQIGILKMKVKEKDLEFIKSA-------PE 689

Query: 730 PRLRKQVCTC 739
           P+  K +   
Sbjct: 690 PKKEKIITAV 699


>gi|317502262|ref|ZP_07960435.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|336440304|ref|ZP_08619896.1| hypothetical protein HMPREF0990_02290 [Lachnospiraceae bacterium
           1_1_57FAA]
 gi|316896377|gb|EFV18475.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|336013585|gb|EGN43462.1| hypothetical protein HMPREF0990_02290 [Lachnospiraceae bacterium
           1_1_57FAA]
          Length = 791

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 218/732 (29%), Positives = 341/732 (46%), Gaps = 122/732 (16%)

Query: 5   VVQKAQIPFGKS--LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSP 62
           +++K +I FG +  +EES K L                     +I G LN+A   +LL  
Sbjct: 57  IIKKGRISFGDAAPVEESLKRL---------------------EIGGALNTA---ELL-- 90

Query: 63  SEICAV-RRTLRAV----NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
             IC +   T RA     ++  + L +  ++  D L+  +PL   ++ C  ++E E    
Sbjct: 91  -RICRLLSNTARAKSYGRHDTQEDLADCLDIYFDGLEPLTPLSNEIERC-IISEDE---- 144

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKR 174
                    I D AS  L+ IR    R++ NL+  +    + +        +   LIT R
Sbjct: 145 ---------ISDDASSALKHIR----RSINNLNDRVHTTLSGLVNGSLRTYLQDALITMR 191

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R C+ +KA ++  +  G+  + S+SG+T F+EP   V+ NN    L   E  E   IL
Sbjct: 192 GDRYCIPVKAEYRSQV-QGLIHDQSASGSTLFIEPMAIVKLNNDLKELYVQEQDEIRKIL 250

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
           + L+ E A+   EI+     + ++D  FAR   A  M    PIL+ +        I I  
Sbjct: 251 ASLSEEAAQYIEEIRTDYRSLTDLDFIFARGALALTMRASRPILNEEGR------IRIRE 304

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
            +HPLL    +                                   VPI + +  E  ++
Sbjct: 305 GRHPLLDQKKV-----------------------------------VPITVSLGDEFSLL 329

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
           +ITGPNTGGKT S+KT+GL +LM +AGL++PA +   +  F  + ADIGD QS+EQ+LST
Sbjct: 330 IITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAGDRSEIAVFRQVYADIGDEQSIEQSLST 389

Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
           FS H++ IV  L+ V   SLVL DE+G+GTDP+EG ALA +IL +L  R    + TTHY+
Sbjct: 390 FSSHMTNIVSFLKKVDDRSLVLFDELGAGTDPTEGAALAIAILSHLHKRNIRTMATTHYS 449

Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
           +L          ENA  EF +E+LRPTYR+L G  G SNA  I+  +G    II  A+K 
Sbjct: 450 ELKIYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPGYIIDDAKK- 508

Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
               R   Q     +L   L   RR +E +    A+   E   L R+   + + L+ +  
Sbjct: 509 ----RLSEQDVSFEDLLSDLEASRRTIEKEQAEIAAYKKEAETLKRQAVQKQEKLEEQRD 564

Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESE--------SAI 645
            +  +  ++    L  AK   D  +++F    + + SA E+    KE E        ++ 
Sbjct: 565 RIIREANEKANAILREAKEVADETIRNFHKFGKENISAAEME---KERERLRKKIKDTSA 621

Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
           +A ++ ++P   +  S+        + GE V V S+ +   T+  +P     V VQ G +
Sbjct: 622 SASLKTNKPKKTYKPSDF-------KLGESVKVLSM-NLTGTIGSLPDARGNVTVQMGIL 673

Query: 706 RVRVKKNNIRPI 717
           R +V  +++  I
Sbjct: 674 RSQVNISDLEII 685


>gi|365853718|ref|ZP_09393983.1| MutS2 family protein [Lactobacillus parafarraginis F0439]
 gi|363711876|gb|EHL95582.1| MutS2 family protein [Lactobacillus parafarraginis F0439]
          Length = 788

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 186/647 (28%), Positives = 316/647 (48%), Gaps = 69/647 (10%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNS-AVSGQLL 60
           GH +VQ  Q P G      Q+L      A  +  +  + +  + +I+  +    +    L
Sbjct: 27  GHEIVQNLQ-PSGDYAVVDQQLKETADGADIVRLAGEIPIPKLTEISPYMKRLKIENAAL 85

Query: 61  SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
           S +E+  + + LRAV  V +   +    + +   R  P  + +     + ++  ++   I
Sbjct: 86  SGTELAHITKLLRAVKTVSQFFEDFK--NEEVTLRTVP--KTVAKLTLMPDITTRMVQSI 141

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
           D    + LD AS  L  IR   ++   N+ + + K   +  ++  + +P+IT R  R  +
Sbjct: 142 DDDGRV-LDSASSQLRAIRRTIEQTQSNIRTRMGKYL-KGSESKYLSEPIITVRDERFVL 199

Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
            I+A +K     GI  + S+SG T ++EP   VE NN   R   +E  E+  IL+ LT  
Sbjct: 200 PIRAEYKSHF-GGIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERTEQRRILAELTEM 258

Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
           I    +E+   M+ V ++D   A+A +A     V P +S+++       +N+   +HPL+
Sbjct: 259 IRPYRQELLENMNLVGQLDFVNAKAKYAHQSGAVLPKISTEN------VVNLRHARHPLI 312

Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
               +                                   VP DIK+  + + +++TGPN
Sbjct: 313 AKEKV-----------------------------------VPNDIKIGADYQTIIVTGPN 337

Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
           TGGKT ++KT+GL  LM ++GL++ A    ++  FD + ADIGD QS+E NLSTFS H+ 
Sbjct: 338 TGGKTITIKTVGLLQLMGQSGLFITADEESQIGVFDDVFADIGDDQSIEANLSTFSSHMD 397

Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
            I+ I++ ++ +SLVL+DE+G+GTDP EG ALA +I+  +       + TTHY +L    
Sbjct: 398 NIIAIMKQLTDKSLVLLDELGAGTDPKEGAALAMAIIDAIHRSGCEMIATTHYPELKAFA 457

Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
                  NA+ EF +ETLRPTYR+L G  G SNALNIA  +G   +I+Q+A+   +    
Sbjct: 458 YNRPGIINASMEFDVETLRPTYRLLLGIPGQSNALNIASRLGMPEQIVQQAKSFTD---S 514

Query: 541 ERQ--QHRKSEL---YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
           E Q   +  +EL    +   +E  +L ++   A  LHA++   + + +++    DR   H
Sbjct: 515 ENQDINNMIAELTSQTKRAHDEADELATELSEATKLHADLQKRFDQYQNQK---DRLQEH 571

Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
            + +  + V++    AK   D ++ D   + R        + +KE+E
Sbjct: 572 AREQANEIVEK----AKHNADKIIADLHRKQRQVG----KTTVKENE 610


>gi|392971758|ref|ZP_10337151.1| DNA mismatch repair protein MutS [Staphylococcus equorum subsp.
           equorum Mu2]
 gi|392510297|emb|CCI60439.1| DNA mismatch repair protein MutS [Staphylococcus equorum subsp.
           equorum Mu2]
          Length = 782

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 196/701 (27%), Positives = 345/701 (49%), Gaps = 83/701 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  I+  ++ A  G +L+ SE+  ++R ++ + N +K    +  L+ +    Y  L 
Sbjct: 65  LSGLAKISSFIHRATIGGVLNVSELNVIKRLIQ-IQNQYKTFYNSL-LNEEEEINYPILN 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
           + ++    L+ L + I     C    + D AS +L+ IR++  +  + +   L K+    
Sbjct: 123 DRMEQLPVLSNLYQNI--HQKCDAYDLFDDASYELQGIRSKISKTTQRIKQNLDKIVKHQ 180

Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
                +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE +N   
Sbjct: 181 GNQKKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMSNQIS 239

Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILS 279
              N E  E   IL+ LT ++A+ E +   + + ++ +ID   A+A +A+ + G  P  +
Sbjct: 240 SFRNDEAVERERILTELTVQVAE-EADACLISESIMGQIDFLTAKARYARSIKGTKPEFT 298

Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
           +      D ++ +    HPLL  +S+       +N+     D+E                
Sbjct: 299 T------DRTVYLPKAFHPLLDRTSV------VANTIEFAQDIE---------------- 330

Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
                         V+ITGPNTGGKT ++KTLGL   M+++G+ +P  +  +L  F+ + 
Sbjct: 331 -------------TVIITGPNTGGKTVTLKTLGLIIAMAQSGMLIPTLDGSKLSIFENVY 377

Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
            DIGD QS+EQ+LSTFS H+  IV+IL+  ++ SL+L DE+G+GTDPSEG ALA SIL +
Sbjct: 378 CDIGDEQSIEQSLSTFSSHMKNIVEILQDATKNSLILFDELGAGTDPSEGAALAMSILDH 437

Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
           + +   L + TTHY +L           NA+ EF + TL PTY++L G  G SNA +I+K
Sbjct: 438 VHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISK 497

Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
            +G + ++IQ+A+ ++      + +   +E+  SL    ++++ Q         E+  L 
Sbjct: 498 KLGLNMQVIQKAKSMI-----GQDEQEINEMIASLEHNSKRVDEQ-------RIELDQLV 545

Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ---DFENQLRDASADEINS 636
           RE ++    L ++ A  +  E Q + +    A  ++ +  +   D   +LRD   D+  +
Sbjct: 546 REAQEARDALAKQYAQYQNYEKQLLSEAKEKANQRVKSATREADDILKELRDLR-DKKGA 604

Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEV 691
            +KE E     I +  + +D +       +    ++     G++V V + G K   V+E+
Sbjct: 605 DVKEHE----LIDKKKQLEDQYEAKSLKQNVQKQKWDEIKAGDEVKVLTYGQK-GEVLEL 659

Query: 692 PGDDDTVLVQYG--KMRV------RVKKNNIRPIPNSKRKN 724
            GD + V VQ G  KM++      + KK    P    KR+N
Sbjct: 660 IGDKEAV-VQMGIIKMKLPLEDLEKTKKTKETPAKMIKREN 699


>gi|431591285|ref|ZP_19521293.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1861]
 gi|430592228|gb|ELB30249.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1861]
          Length = 642

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 161/511 (31%), Positives = 257/511 (50%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S + K          I + +I ++     + IKAS+K  + DG  ++ S+ G T+
Sbjct: 161 EKEIQSKMLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTF 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            F++ ++G+ P ++   H+       I+  +HP L                         
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  VP+D+++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|365924477|ref|ZP_09447240.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
           20444]
 gi|420265357|ref|ZP_14767919.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
           20444]
 gi|394428189|gb|EJF00772.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
           20444]
          Length = 786

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 190/596 (31%), Positives = 304/596 (51%), Gaps = 78/596 (13%)

Query: 60  LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
           L+  E+ AV + LRA N V +   +   LD ++++  S L EL  +   L E+ +++   
Sbjct: 84  LNGKELAAVSKVLRATNEVRRFFVK---LDDEAIELAS-LDELAADLQVLPEVNKRLLTS 139

Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRR 175
           I+    +  D AS  L  IR    R++  ++  L+     +   G   K L    IT R 
Sbjct: 140 IEGDGHVT-DEASTALAGIR----RSIAAIEGQLRD-QLNVLVHGNSSKYLSDAVITIRN 193

Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
            R  + +K  ++     G+  + S+SG T F+EPK  VE NN   +  ++E  E   IL 
Sbjct: 194 DRYVIPVKQEYRSHF-GGVVHDQSASGQTVFVEPKQIVELNNRLKQQQSNEKEEVARILR 252

Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
            L+  IA    EI+  +  +   D   A+A +A  +    P+LS+++ V       +  +
Sbjct: 253 ELSQLIAPYTTEIRQNVYLLGVFDFVNAKAQYAAQIKATEPLLSTENKVY------LRQV 306

Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
            HPLL                 +K+ V N                   DI +  + R +V
Sbjct: 307 WHPLL----------------DMKAAVRN-------------------DIMLGDDYRAIV 331

Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
           +TGPNTGGKT ++KTLGL  LM +AGL++PA    R+  FD I ADIGD QS+EQ+LSTF
Sbjct: 332 VTGPNTGGKTITLKTLGLVQLMGQAGLFIPAFEESRIGIFDNIFADIGDEQSIEQSLSTF 391

Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
           S H++ IV IL  +  +SL+L DE+G+GTDP EG ALA SIL Y+  +    + TTHY +
Sbjct: 392 SSHMTNIVSILSEIDDKSLILFDELGAGTDPQEGAALAISILDYVGSKSSYVMATTHYPE 451

Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           L     +  +  NA+ EF +E+L+PTY +L G  G SNAL+I+K +G D  II +A++L 
Sbjct: 452 LKAYGYERPQTINASMEFDIESLKPTYHLLLGIPGRSNALDISKKLGLDDVIIMQAKQLT 511

Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASLHAEIMDLYREIEDEAKD 588
                  Q    +++ Q L+ +R ++E ++         +  LH ++   Y E  ++ ++
Sbjct: 512 -----AGQNQDLNDMIQDLVAKRHQVEEESIELHKNLEESRKLHDDLGKKYDEFVNQREN 566

Query: 589 L---DRRAAH----LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL 637
           L    RR  +      AK+++++  EL   ++   T ++  E++L  A A  +N+L
Sbjct: 567 LLDNARRKGNEIVEQAAKKSEKIIAELRKMRLNAGTTIK--EDKLISAKA-RLNAL 619


>gi|423660606|ref|ZP_17635775.1| MutS2 protein [Bacillus cereus VDM022]
 gi|401302514|gb|EJS08093.1| MutS2 protein [Bacillus cereus VDM022]
          Length = 786

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 210/698 (30%), Positives = 341/698 (48%), Gaps = 87/698 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  L    P+L
Sbjct: 65  LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +    
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++++ ++    +      +HPL+               +P                  
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   +  F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SNA 
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
            I+K +G   ++I RA+  +  +  + E    +  E  ++   ER++ E   + +  LH 
Sbjct: 493 EISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHR 552

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
           E+     E  DE     R    LKA+  ++ ++++  AK + + ++Q+   QLR A    
Sbjct: 553 ELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKQEAEGIIQEL-RQLRKAQLIN 604

Query: 634 I--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDK 684
           +  + LI+     E A   +V+  +          N  +  P+     G++V V + G K
Sbjct: 605 VKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQK 655

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
              + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 656 GQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|226323501|ref|ZP_03799019.1| hypothetical protein COPCOM_01276 [Coprococcus comes ATCC 27758]
 gi|225208185|gb|EEG90539.1| MutS2 family protein [Coprococcus comes ATCC 27758]
          Length = 791

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 175/553 (31%), Positives = 274/553 (49%), Gaps = 59/553 (10%)

Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
           +IT R  R C+ +KA ++  + +G+  + S++G+T F+EP   V+ NN    L   E  E
Sbjct: 187 IITMRGDRYCLPVKAEYRSQV-NGLIHDQSATGSTLFIEPMAVVKLNNDLKELYAQEQEE 245

Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
              IL+ L+ + A+   EI+     ++E+D  FA+   A  M+   P+ +++        
Sbjct: 246 IQVILARLSVDAAEYIEEIRLNYKALVELDFIFAKGALALDMNASRPVFNTEGR------ 299

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
           I I   +HPLL    +                                   VPI + +  
Sbjct: 300 IRIREGRHPLLDRKKV-----------------------------------VPISLTLGD 324

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
              ++VITGPNTGGKT S+KT+GL +LM +AGL++PA +   L  F+ + ADIGD QS+E
Sbjct: 325 TFDLLVITGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELAVFNQVYADIGDEQSIE 384

Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
           Q+LSTFS H++ +V  L  V   SLVL DE+G+GTDP+EG ALA +IL +L +R    + 
Sbjct: 385 QSLSTFSSHMTNVVSFLNHVDENSLVLFDELGAGTDPTEGAALAIAILSHLHNRGIRTMA 444

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTHY++L          ENA  EF +ETL PTY +L G  G SNA  I++ +G    IIQ
Sbjct: 445 TTHYSELKVFALSTPGVENACCEFDVETLSPTYHLLIGIPGKSNAFAISEKLGLPDYIIQ 504

Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
            A+     L  E +     +L   L + R+ +E +    AS   E+  L  E++++ + L
Sbjct: 505 DAKT---HLTEEDESF--EDLLTDLEQSRKTIEKEREEVASYRREMERLKSELKNQQEKL 559

Query: 590 ----DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESA 644
               DR      A+ T  VQ+  +FA    D  +++F    + + SA E+    +     
Sbjct: 560 DTQRDRIIREANARATDIVQEAKDFA----DETMKNFRKFGKASISASEMEKERERIRKQ 615

Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
           ++     +R +          S F    G+ V V S+ +   TV  +P     + VQ G 
Sbjct: 616 LSKTENKNRLEKKKPSKAYKASDF--HLGDSVKVLSM-NLTGTVNSLPDAKGNLFVQMGI 672

Query: 705 MRVRVKKNNIRPI 717
           +R +V  +++ PI
Sbjct: 673 LRSQVNISDLEPI 685


>gi|402310174|ref|ZP_10829142.1| MutS2 family protein [Eubacterium sp. AS15]
 gi|400369416|gb|EJP22416.1| MutS2 family protein [Eubacterium sp. AS15]
          Length = 785

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 207/721 (28%), Positives = 339/721 (47%), Gaps = 114/721 (15%)

Query: 23  LLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           LL QTS A  M+ ++  +   +I D+      A  G +L    +  V+ TLR        
Sbjct: 46  LLEQTSEAQKMIVTKGAIPFGSIYDVRLKAKKASIGSILDAKSLIKVKETLRT------- 98

Query: 82  LTEAAELDGDSLQRYS--PLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
               A +    ++++   P++  +  N      +E++I   I  +  I  D AS +L  I
Sbjct: 99  ----ARISKSYVEQFEDIPVISSISDNIRVSKSIEDEIERAIISETEI-SDDASTELRRI 153

Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
           R +     +++ + L ++      A  +   ++T R  R  + +K+ ++   P GI  + 
Sbjct: 154 RRQMANEKQSIKNKLNEIVTSAKYAKILQDTVVTVRNDRFVLPVKSENRDQFP-GIVHDT 212

Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
           SSSGAT F+EP   V  NN    L   E  E   IL+ LT+ + +   EI Y  + + E+
Sbjct: 213 SSSGATMFIEPMAIVNMNNHLSALKQEEYREIERILAYLTSIVGEFSEEIIYDCEMLEEL 272

Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
           D   A+   +  MD + P ++   +V F ++      +HPL+                  
Sbjct: 273 DFIMAKGKLSVSMDAIEPKINQDKYVRFVNA------RHPLIE----------------- 309

Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
           K  V +S + +G                       +VITGPNTGGKT ++KTLGL  +M 
Sbjct: 310 KDKVVSSTIEIGK------------------SYTTLVITGPNTGGKTVTLKTLGLLCIML 351

Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
           + GL++P         F+ I ADIGD QS+ Q+LSTFS H++ IV I+  V   SLVL D
Sbjct: 352 QCGLHIPCDIGSSGYIFNNIFADIGDEQSIAQSLSTFSAHMTNIVGIMNEVDENSLVLFD 411

Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
           E+G+GTDP EG  LA SIL  L+++  L   TTHY++L        +  NA+ EF + TL
Sbjct: 412 ELGAGTDPVEGAGLAISILDTLKEKDILTAATTHYSELKNYALTVDKVTNASVEFDVNTL 471

Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE-------RQQHRKSE 549
            PTYR++ G  G SNA  I++ +G  + IIQRA+  +  E ++ E       + ++   E
Sbjct: 472 SPTYRLIIGIPGKSNAFEISQKLGLSKDIIQRARDTIHTESIKVEDVITKLDKIKNEYEE 531

Query: 550 LYQSLMEE-------RRKLESQARTAASLHAEIMD--------LYREIEDEAKDLDRRAA 594
             Q L +E       R KLE++ R A     +I++        L  E ++EA ++++   
Sbjct: 532 KKQRLEKELEDAEFIRLKLENRERRAQQNSEKILEEAKNKARSLVEEAKNEADEINKVLN 591

Query: 595 HL-KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
            L K+ + + + +++N  K +I+T         +D  A +   L+K +E          +
Sbjct: 592 KLKKSSDYKNIDKKMNEIKGRINT--------FKDKYAKKKEELVKSNE----------K 633

Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
           P ++  V            G+ V+V S     A V+ V    + V+VQ G +++ +KK N
Sbjct: 634 PIENVGV------------GDIVYVNSFAQN-AKVLSVDDKKNEVVVQLGAIKMTLKKEN 680

Query: 714 I 714
           I
Sbjct: 681 I 681


>gi|449095303|ref|YP_007427794.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis XF-1]
 gi|449029218|gb|AGE64457.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis XF-1]
          Length = 785

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 210/700 (30%), Positives = 345/700 (49%), Gaps = 76/700 (10%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
           DI G L  A  G +LSPSE   +   L AV  +   +T+ AE DG  +    PL+ +  +
Sbjct: 70  DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124

Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
               L++LE  I  CID    + LD ASE L  IR + +    R  + L+S+L+  +A  
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183

Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
                +   ++T R  R  + +K  ++     GI  + SSSGAT F+EP+  V+ NN   
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238

Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
           +    E  E   IL +LT + A+   E+ +L  +VL+ +D  FA+A +A+ +    PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEHTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297

Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
                     I ++  +HPLL                P    V N               
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320

Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
               DI++  +   +VITGPNTGGKT ++KTLGL +LM+++GL++PA        F+ + 
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376

Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
           ADIGD QS+EQ+LSTFS H+  IV ILE V+  SLVL DE+G+GTDP EG ALA SIL  
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436

Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
           +       + TTHY +L           NA+ EF +ETL PTY++L G  G SNA  I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496

Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
            +G    II +A+  +       + +    +  SL + +++ E +     S+  E   L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551

Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 639
           +E++ +  +L+ +   +  +  QQ  +++  A  + + ++ +  +   +  + + + LI 
Sbjct: 552 KELQQQIIELNSKKDKMLEEAEQQAAEKVKAAIKEAEDIIHELRSIKEEHKSFKDHELIN 611

Query: 640 ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
            ++  +   + A          +     F P  G++V V + G K  T++E  G ++   
Sbjct: 612 -AKKRLEGAMPAFEKSKKPEKPKAQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN- 666

Query: 700 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTC 739
           VQ G ++++VK+ ++  I ++       P P+  K +   
Sbjct: 667 VQIGILKMKVKEKDLEFIKSA-------PEPKKEKIITAV 699


>gi|20808111|ref|NP_623282.1| recombination and DNA strand exchange inhibitor protein
           [Thermoanaerobacter tengcongensis MB4]
 gi|254479026|ref|ZP_05092382.1| MutS2 family protein [Carboxydibrachium pacificum DSM 12653]
 gi|23821879|sp|Q8R9D0.1|MUTS2_THETN RecName: Full=MutS2 protein
 gi|20516697|gb|AAM24886.1| MutS-like ATPases involved in mismatch repair, family 1
           [Thermoanaerobacter tengcongensis MB4]
 gi|214035022|gb|EEB75740.1| MutS2 family protein [Carboxydibrachium pacificum DSM 12653]
          Length = 790

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 150/406 (36%), Positives = 225/406 (55%), Gaps = 44/406 (10%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           I D AS  L+ IR ++    E + S L  + +   +   + +P+IT R+ R  V +K  +
Sbjct: 147 ISDEASPVLKAIRRQKASINEKIKSTLNSIIST--RQKELQEPIITMRQGRYVVPVKQEY 204

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           + +   GI  + SS+GAT F+EP   V+ NN    L   E  E   IL  L+ E+ K+  
Sbjct: 205 RNVFK-GIIHDQSSTGATLFIEPIQVVDLNNELRELELKEQKEIERILFELSQEVKKNAE 263

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
            I   ++ V E+D  FA+A ++  +    P L++  +V      N++  +HPL+      
Sbjct: 264 AIFKDVEVVSELDFLFAKARYSIKIKASRPELNTSGYV------NLKKARHPLI------ 311

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                    +P K                     VPIDI +  E   +VITGPNTGGKT 
Sbjct: 312 ---------DPEKV--------------------VPIDIHIGREFTTLVITGPNTGGKTV 342

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KT+GL +LM+ AG+ +PA+   ++  F+ +  DIGD QS+EQ+LSTFS H++ IV IL
Sbjct: 343 TLKTVGLLTLMAMAGINIPAEEKSQISIFEDVFVDIGDEQSIEQSLSTFSSHMTNIVSIL 402

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           + V++ SLVL+DE+G+GTDP EG ALA SIL +L       + TTHY++L     K    
Sbjct: 403 KKVNKNSLVLLDELGAGTDPLEGSALAMSILDFLHRTGCRTIATTHYSELKQYALKTKGV 462

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
           ENA+ EF +ETLRPTYR++ G  G SNA  I++ +G   +II+ A+
Sbjct: 463 ENASVEFDVETLRPTYRLIIGIPGRSNAFEISRRLGLSEEIIENAK 508


>gi|390956087|ref|YP_006419844.1| mismatch repair ATPase [Terriglobus roseus DSM 18391]
 gi|390411005|gb|AFL86509.1| mismatch repair ATPase (MutS family) [Terriglobus roseus DSM 18391]
          Length = 818

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 189/610 (30%), Positives = 300/610 (49%), Gaps = 79/610 (12%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           + D AS +L  IR    R  + ++  L++    +  AGG  + LIT R  R  + +KA  
Sbjct: 155 LADSASPELARIRKAMDRQHKAIEESLRRQLRAVSDAGGTQEDLITIRGERFVIPVKAEF 214

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           +  +P G+    SSSG T F+EP   +EFNN  VRL + E +E   IL  +T  + +   
Sbjct: 215 RRKVP-GVIHGSSSSGQTVFVEPMETIEFNNELVRLMDEEQSEIHRILISMTQAVGEQAG 273

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
            +    + + E++  FA A FAQ +D V PI +       D+++++E  +HP+L      
Sbjct: 274 SLSRGTEVLAEVEAHFAYAKFAQDLDCVRPIFTDGKPHGDDAALSLEAARHPML------ 327

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                      L+   E +++             VP+ + +    + ++I+GPNTGGKT 
Sbjct: 328 ----------ELRMRSEKAKI-------------VPLTLGLPGVAKQLIISGPNTGGKTV 364

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KT+GL +LM++AGL +PAK   RLP F  + ADIGD QS+E+NLSTFS HIS +  I 
Sbjct: 365 ALKTVGLLALMAQAGLPVPAK-LARLPIFAAVYADIGDAQSIERNLSTFSAHISHVNQIA 423

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
                 SLVL+DE+GS TDP EG ALA +I +        +++TTH   L     K    
Sbjct: 424 READPRSLVLLDELGSATDPEEGAALAVAISERFLTMGAWSMITTHLTSLKIYAAKHDGV 483

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
            NAA  F   TL PTY +  G  G S+ +NIA+ +G D  +I  A+  V          +
Sbjct: 484 VNAAVGFDERTLAPTYELRMGVPGASSGINIAERLGLDAGMISAARASV--------TTQ 535

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
            +++ + L E   +L +  +  A + A      REI      +DR    L+++   + +Q
Sbjct: 536 SADIARFLDELHTQLTAVGKERAEIRA------REIA-----VDRERQRLESEGKVEQRQ 584

Query: 607 ELNFAKVQIDTVVQDFENQLRD---------------ASAD-EINSLIKESESAIAAIVE 650
                +V++ +++++FE Q+R+               A AD  I  L +E + +   +V 
Sbjct: 585 RARELEVKLGSLMKEFEFQMRESVKGIEDKSAQRKASAEADRRIARLKREFQESFNQVVV 644

Query: 651 AHRPDDDFSVSETNTSSFTPQ------FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
           AH      S ++    +  P        G+ V +KS+G +    VE   D  T  V  G 
Sbjct: 645 AH-----VSGADKKDPAAQPHVVREVSVGDTVLLKSMGRE--AKVERVIDAKTFEVSIGP 697

Query: 705 MRVRVKKNNI 714
           M++RV K++I
Sbjct: 698 MKMRVPKDDI 707


>gi|363892244|ref|ZP_09319412.1| MutS2 family protein [Eubacteriaceae bacterium CM2]
 gi|361964194|gb|EHL17238.1| MutS2 family protein [Eubacteriaceae bacterium CM2]
          Length = 785

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 186/633 (29%), Positives = 306/633 (48%), Gaps = 84/633 (13%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           I D AS DL  IR +     +N+ + L +  +    +  +   ++T R  R  V +K+ +
Sbjct: 142 ISDDASVDLRRIRRQINSEKQNIKNKLNEFVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           +   P GI  + SSSGAT F+EP   V  NN    L   E  E   IL+ LT+ + +   
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           +I +  D + ++D   A+   +  M+ + P ++ + ++   ++      +HPL+      
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKLINA------RHPLIE----- 309

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                       K  V +S + +G                   E   ++ITGPNTGGKT 
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KTLGL SLM +AGL++P      +  FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           + V   SLVL DE+G+GTDP EG  LA SIL+ L+ +  L V TTHY++L          
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILETLKSKNILTVATTHYSELKNYALTQENV 459

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV----------- 535
            NA+ EF + TL PTY++L G  G SNA  I+K +G   +II  A++ +           
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIKTDSIQMEDVI 519

Query: 536 ---ERLRPERQQHRKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYREIEDEAKD 588
              E++R + +  +K E  Q  +E+    R KLE++ +     + ++      IED AK+
Sbjct: 520 SKLEKIRTDYE--KKQEELQKELEDVKYIRLKLENKEQRQKEQNKKL------IED-AKE 570

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
             R+       E   + + LN  K++  +  ++ + Q+ +   +      K ++S    I
Sbjct: 571 KARKLIEDAKSEADIISKNLN--KIKNSSDYKNIDRQMNELKTNINKYKEKYAKSKEELI 628

Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
            ++ +P ++ +V            G+ V+V S   K A V+ V    D VL++ G +++ 
Sbjct: 629 AKSSKPLENINV------------GDIVYVNSFA-KNAKVLSVDDAKDEVLIELGAIKMT 675

Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQVCTCTS 741
           VKK N+      K K +      L  +  T  +
Sbjct: 676 VKKENLSTQEKIKEKKSTKAGKILTNKTKTAQT 708


>gi|187935216|ref|YP_001886652.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum B str. Eklund 17B]
 gi|238691672|sp|B2TS45.1|MUTS2_CLOBB RecName: Full=MutS2 protein
 gi|187723369|gb|ACD24590.1| MutS2 family protein [Clostridium botulinum B str. Eklund 17B]
          Length = 785

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 206/727 (28%), Positives = 345/727 (47%), Gaps = 100/727 (13%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
           +P+  + E +  L     A   +M+     +  + DI  IL  A  G  L+P ++  V  
Sbjct: 35  VPYDNTYEINNSLEESNEALEILMKKGNPPIEGLCDIGDILQRAKKGGTLTPEQLLKVLG 94

Query: 71  TL---RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
            L   R +   +K+  E  E+   S  +   L  +L   N L +  E+     D     +
Sbjct: 95  MLTATRRMQEFFKR--EEQEV---SFPKLEDLAYILAPINDLEKEIERSILSEDE----V 145

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKAS 185
            D AS  L  IR    R+++  +S +++    I ++    +   L T R  R  + +KA 
Sbjct: 146 SDNASTTLYNIR----RSLKEKNSSVREKINSIVRSNSKYLQDSLYTIRGDRYVIPVKAE 201

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           +K  +P G+  + SS+GAT F+EP G V  NN    L   E AE   +LS L+ ++  + 
Sbjct: 202 YKSSVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIDRVLSALSLKVKMNA 260

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
              +  +  +  +D  F++  +A  ++ + P+      V  D   NI   +HPL+     
Sbjct: 261 EHCESNLKILTNLDFIFSKGKYACELNAIKPM------VRDDGIFNIMSGRHPLIE---- 310

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                                           D  VP+D+ +  E   ++ITGPNTGGKT
Sbjct: 311 -------------------------------KDKVVPLDVVLGDEFDTLMITGPNTGGKT 339

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KT+GL  +M+ +GL +PA ++  + +F  + ADIGD QS+EQ+LSTFS H++ IV+I
Sbjct: 340 VTLKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIEQSLSTFSSHLTNIVNI 399

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           +E  +R+SL+L DE+G GTDP+EG ALA +I++ L  +    + TTHY++L        R
Sbjct: 400 MEYDNRQSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKLIATTHYSELKAYALNKDR 459

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
            ENA+ EF + TLRPTYR+L G  G SNA  I+K IG  +++I  A+  + +   E +  
Sbjct: 460 VENASVEFDINTLRPTYRLLIGVPGKSNAFEISKRIGLGKEVIDCAKNYMSKENLEFEG- 518

Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKAKETQQ 603
               L ++L E+    +  AR A  +  E  +L ++ E + + L+  +  A+++A+E  +
Sbjct: 519 ----LIRNLQEKSIIAKKDARDAKVIKDEADNLKKKYEQKLERLEKVKDKAYMEAREEAK 574

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE-----SAIAAIVEAHRP--DD 656
                         +V + +++     ADEI   ++E E     S     +E  R    D
Sbjct: 575 -------------KIVANAKDE-----ADEILKAMRELEKLGIGSGGRQRLEEERKKLKD 616

Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLG--------DKLATVVEVPGDDDTVLVQYGKMRVR 708
                E N        GE +   +LG        ++   V+ +P +   V V+ G M++ 
Sbjct: 617 SLEEKEKNLYKMKENDGEVLEKVALGMEAFLPSLNQTVVVISMPDNRGEVQVEAGIMKIS 676

Query: 709 VKKNNIR 715
           VK  ++R
Sbjct: 677 VKLKDLR 683


>gi|168049630|ref|XP_001777265.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671367|gb|EDQ57920.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 916

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 148/385 (38%), Positives = 217/385 (56%), Gaps = 26/385 (6%)

Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
           PVPID++V  ET+VV ITGPNTGGKTA++KT+GLA+LM+K+GL++       LPWFD +L
Sbjct: 542 PVPIDVRVVGETKVVAITGPNTGGKTATIKTVGLAALMAKSGLFVLGIEPVVLPWFDAVL 601

Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ- 458
           ADIGD QSL Q+LSTFSGH+ RI  I E+ +  SLVL+DE+G+GTDP+EG AL  ++L+ 
Sbjct: 602 ADIGDEQSLSQSLSTFSGHLRRIKRIKEVSTGSSLVLLDEVGAGTDPTEGAALGMALLES 661

Query: 459 YLRDRVG---LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           + +   G   L + TTH+ +L  LK  D+RFENA+ EFS E LRPTY++LWG  G SNA+
Sbjct: 662 FAQSGKGGSYLTMATTHHGELKTLKYSDSRFENASVEFSEEKLRPTYKLLWGIPGRSNAI 721

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
           NIA+ +G  + I+  A+ L   +  +      SE+   L   +R  +    TA S   + 
Sbjct: 722 NIAERLGVPKDILDEARTLYGVVSAQL-----SEVIMELELAKRDFDQDIATADSQITDS 776

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-----DAS 630
             L +++   +K L      L  +   +V      A+ Q+  + +D ++  +       S
Sbjct: 777 KMLLQQLVAVSKKLQENQHMLDVQRADRVAAAAGAARSQLHAIARDVKSSTKVPLKVPPS 836

Query: 631 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 690
               N+ + + +  +     +  P               P  G+ V+V  LG + A VVE
Sbjct: 837 FQNTNTEVTQVKQNMKVATNSQAP-----------KGAVPSVGDMVYVPKLG-RNAKVVE 884

Query: 691 VPGDDDTVLVQYGKMRVRVKKNNIR 715
           V      V VQ G M+V+VK   I+
Sbjct: 885 VKTSKKEVTVQSGAMQVKVKLKEIQ 909



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 145/311 (46%), Gaps = 37/311 (11%)

Query: 6   VQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAV-------- 55
           +Q  +IP  +  E S+ LL  TSA +  +     P +L       G+L + V        
Sbjct: 151 LQVLEIPATR--EASEALLELTSAGVEFISLLGGPFEL-------GVLRTQVVKDCILRI 201

Query: 56  -SGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEE 114
             G ++S  E  AV   L+   NV ++++  A+   D      P+++++    +      
Sbjct: 202 RKGMVVSGVEALAVAMLLQTSGNVRRQVSNTAQEFQDRQSVLEPIVDMVGPLKYFRGHAA 261

Query: 115 KIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
            I   ID +   + D AS +L   R + +   + L  L  K++    +   I    +   
Sbjct: 262 TI---ID-EDGTVKDSASPELRKARIQERSVEQRLRELFNKISRD--KGANIQSEEVVLV 315

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAI 233
             RMC+ + + ++  +P G+ L  S SGAT ++EP GAV  NN ++  + +E+A+ E  +
Sbjct: 316 DGRMCLVVASDNRSNVP-GLLLR-SGSGATSYIEPAGAVPLNN-KLSEARAEVAKAEYNV 372

Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL---SSQSHVSFDSSI 290
           LS LT ++     +I++ ++ ++ +D+  ARA ++ W+    P      SQS V     +
Sbjct: 373 LSRLTDQLRPYLDDIQFCLNIIVRLDVIMARARYSTWLGATKPTFIDTESQSLV----RL 428

Query: 291 NIEGIKHPLLL 301
            +   +HPLL+
Sbjct: 429 QLRRARHPLLV 439


>gi|300813660|ref|ZP_07093982.1| putative recombination and DNA strand exchange inhibitor protein
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512202|gb|EFK39380.1| putative recombination and DNA strand exchange inhibitor protein
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 788

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 206/715 (28%), Positives = 352/715 (49%), Gaps = 68/715 (9%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           +I      EE  K L +TS A++++  + +P  L  I  +  +L  A  G +L+PS +  
Sbjct: 34  EIEISTDYEEINKRLKETSEAVSLIVKKGEP-PLFAIISLRDVLRRASLGGILNPSNLID 92

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           +   LR V+ + K   +  + D ++ +  S + +L+ N      LE+ I      K +I 
Sbjct: 93  ISNFLR-VSRLLKNYLKKDDKDENT-ENISIIKDLIDNLYINRNLEDSIN-----KKIIS 145

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKAS 185
            D+ ++D        +RN+  L   L++   +I Q+    +   +IT R  R  + ++  
Sbjct: 146 EDQVADDASRKLLSIRRNIVKLQGSLREKLEKILQSQKDYLQDCIITMREGRYVIPVRNE 205

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           +K  +  G+  ++S SG T ++EP   V  NN    L   E  E   IL  L+ E+A+  
Sbjct: 206 NKSKVK-GLVHDISGSGQTVYIEPIEVVNANNEIKTLKIEEKEEVEKILKELSEEVAEVS 264

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
             I+     + EID  FA+   +  M    P       V+ +  I+++   HPLL     
Sbjct: 265 TSIESNELILREIDFIFAKGKLSLDMGANLP------KVNKNRYIDLKNAYHPLL----- 313

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                             N ++ V            PI+I +  +   ++ITGPNTGGKT
Sbjct: 314 ------------------NRKIAV------------PINIYIGKDFTSLIITGPNTGGKT 343

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KTLG+  LM++ GL++PA    ++  F+ + ADIGD QS+EQNLSTFS H++ IV+I
Sbjct: 344 VTLKTLGILQLMAQYGLHIPADEDSQVGIFNNLFADIGDEQSIEQNLSTFSSHMTNIVEI 403

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           LE V  +SLVL DE+G+GTDP+EG ALA SI+ ++ +R    + TTHY  L         
Sbjct: 404 LEKVDEDSLVLFDELGAGTDPTEGAALARSIMDFMLERKIRCISTTHYNQLKIYALTTEG 463

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
            +NA+ EF + TL PTY++L G  G SNA  I+K +G  +KII  A+ L+       Q++
Sbjct: 464 VKNASMEFDINTLSPTYKLLIGLPGKSNAFEISKRLGLSQKIINHARDLIS------QEN 517

Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE---IEDEAKDLDRRAAHLKAKETQ 602
            + E   + +E+ R    + +  A  H    DL ++   +E+E K ++     +  +   
Sbjct: 518 IEFEKVLASIEKDRTKTREFKELAKRHKS--DLEKQNARLENELKKIENSKEKILKEAKD 575

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
           + ++ L   K  +D ++ +  +   + S+D+    I+ES   +   +     D  F + +
Sbjct: 576 EARRILLSTKENVDLILDEISSLKAEISSDQARR-IQESGDLLRNSIRKVDNDKKFVIEK 634

Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
                   + G+QV   S G+ ++TV+E+P     + +Q G M+++V K ++  I
Sbjct: 635 AKKPIEDIKVGDQVR-NSFGN-ISTVLELPDSKGNIYIQSGIMKMKVPKESLTKI 687


>gi|167749635|ref|ZP_02421762.1| hypothetical protein EUBSIR_00593 [Eubacterium siraeum DSM 15702]
 gi|167657388|gb|EDS01518.1| MutS2 family protein [Eubacterium siraeum DSM 15702]
          Length = 793

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 185/620 (29%), Positives = 299/620 (48%), Gaps = 82/620 (13%)

Query: 129 DRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
           D AS  L  IR   +R      E LD L+K  + Q +    + + L+T R  R  V +K 
Sbjct: 144 DSASPQLAAIRRSIQRKSLAVRERLDKLIKSQSTQKY----LQESLVTMRDGRFVVPVKT 199

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE-------IAEETAILSLL 237
            +K  +  G+  + S++GAT F+EP   VE NN E+R+   E       I +E + L   
Sbjct: 200 EYKSEIS-GLVHDTSATGATLFIEPMAVVEANN-EIRVLQIEEQKEIERIIKEMSELVGS 257

Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
            AE   ++ EI      VL +++ FA+A     M  V P+++ +         N+   +H
Sbjct: 258 FAEPMINDYEI------VLMLEIYFAKANLGAKMKAVTPVITDKP------CFNLIRARH 305

Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
           PL+                                     D  VPI +++  +   +++T
Sbjct: 306 PLI-----------------------------------DKDKVVPISLELGNDYSSLIVT 330

Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
           GPNTGGKT S+KT GL  LM+  G+ +PA  +  +  FD +  DIGD QS+EQ+LSTFS 
Sbjct: 331 GPNTGGKTVSLKTAGLLVLMAMCGMMIPASENSVIGMFDELYVDIGDEQSIEQSLSTFSS 390

Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
           H++ I  IL     +SL+++DE+ SGTDP EG ALA SIL   R R    + TTHY ++ 
Sbjct: 391 HMTNIARILRTADEKSLIMLDELCSGTDPVEGSALAVSILDEFRKRDCKVIATTHYQEVK 450

Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
               K    ENA+ EF ++TLRPTYR++ G  G SNA  I+  +G    II  A++LV  
Sbjct: 451 MYAIKTDNVENASCEFDIKTLRPTYRVIVGMPGKSNAFAISSKLGISSDIIDNAKELV-- 508

Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
                +  R  E+ QSL + R++LE    +AA+   +  ++  +++ E   L++     K
Sbjct: 509 ---STEDKRFEEVVQSLEKTRQELEKLKSSAAAEQKKSKEITEQLKAERDQLEKD----K 561

Query: 598 AKETQQVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
            KE Q V+ +    +   + Q D ++++ E   +   + +    +K + S I + V    
Sbjct: 562 EKELQDVRSKAASIIEEVRFQGDLMLEELERLRKQKESADFAQKVKGARSHINSSVNGMY 621

Query: 654 PDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
              +  + +       P   + G+ V +  L +K  T++ +P   +   VQ G M+ + K
Sbjct: 622 DTANPIMQKKIDHYVLPRPLKVGDTVRLADL-NKEGTLLRLPDSKNMCFVQVGAMKTKTK 680

Query: 711 KNNIRPIPNSKRKNAANPAP 730
             N+R +   K+++   P P
Sbjct: 681 LENLRLV-EEKKESKKQPTP 699


>gi|403046921|ref|ZP_10902390.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus sp. OJ82]
 gi|402763617|gb|EJX17710.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus sp. OJ82]
          Length = 782

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 191/704 (27%), Positives = 348/704 (49%), Gaps = 79/704 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           LS +  I+  ++ A  G +L+ SE+  ++R ++ + N +K    +  L+ +    Y  L 
Sbjct: 65  LSGLAKISSFIHRATIGGVLNVSELNVIKRLIQ-IQNQYKTFYNSL-LNEEEEINYPILN 122

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
           + ++    L+ L + I     C    + D AS +L+ IR++  +  + +   L K+    
Sbjct: 123 DRMEQLPVLSNLYQNI--HQKCDAYDLFDDASYELQGIRSKISKTTQRIKQNLDKIVKHQ 180

Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
                +   ++T R  R  + +KA ++    +GI  + S+SG T ++EP   VE +N   
Sbjct: 181 GNQKKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMSNQIS 239

Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILS 279
              N E  E   IL+ LT ++A+ E +   + + ++ +ID   A+A +A+ + G  P  +
Sbjct: 240 SFRNDEAVERERILTELTVQVAE-EADACLISESIMGQIDFLTAKARYARSIKGTKPEFT 298

Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
           +      D ++ +    HPLL  +S+       +N+     D+E                
Sbjct: 299 T------DRTVYLPKAFHPLLDRTSV------VANTIEFAQDIE---------------- 330

Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
                         V+ITGPNTGGKT ++KTLGL   M+++G+ +P  +  +L  F+ + 
Sbjct: 331 -------------TVIITGPNTGGKTVTLKTLGLIIAMAQSGMLIPTLDGSKLSIFENVY 377

Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
            DIGD QS+EQ+LSTFS H+  IV+IL+  ++ SL+L DE+G+GTDPSEG ALA SIL +
Sbjct: 378 CDIGDEQSIEQSLSTFSSHMKNIVEILQDATKNSLILFDELGAGTDPSEGAALAMSILDH 437

Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
           + +   L + TTHY +L           NA+ EF + TL PTY++L G  G SNA +I+K
Sbjct: 438 VHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISK 497

Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
            +G + ++IQ+A+ ++      + +   +E+  SL    ++++ Q         E+  L 
Sbjct: 498 KLGLNMQVIQKAKSMI-----GQDEQEINEMIASLEHNSKRVDEQ-------RIELDQLV 545

Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ---DFENQLRDASADEINS 636
           RE ++    L ++ A  +  E Q + +    A  ++ +  +   D   +LRD   D+  +
Sbjct: 546 REAQEARDALAKQYAQYQNYEKQLLSEAKEKANQRVKSATREADDILKELRDLR-DKKGA 604

Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEV 691
            +KE E     I +  + +D +       +    ++     G++V V + G K   V+E+
Sbjct: 605 DVKEHE----LIDKKKQLEDQYEAKSLKQNVQKQKWDEIKAGDEVKVLTYGQK-GEVLEL 659

Query: 692 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 735
            GD + V VQ G +++++   ++       +K    PA  ++++
Sbjct: 660 IGDKEAV-VQMGIIKMKLPLEDLEKT----KKTKETPAKMIKRE 698


>gi|424779902|ref|ZP_18206788.1| Recombination inhibitory protein MutS2 [Catellicoccus marimammalium
           M35/04/3]
 gi|422843441|gb|EKU27878.1| Recombination inhibitory protein MutS2 [Catellicoccus marimammalium
           M35/04/3]
          Length = 790

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 209/712 (29%), Positives = 344/712 (48%), Gaps = 93/712 (13%)

Query: 18  EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           EE Q+ L QT  A+ M++  + L    + D    L+    G  +   EI  +   L+   
Sbjct: 40  EEVQQALEQTKEAMTMLRLGKELPFLALTDPRQSLSRIKIGASIQALEILNLGHILKNAA 99

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
            V +KL E  E +      +  L  L++    +  L  +I  CI+ +  +  D A+E L 
Sbjct: 100 QVLRKLEELEEEES-----FPELKALIQQLQPIPSLSGEIHRCINEQGQV-EDSATERL- 152

Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDG 193
              A+ +R +   +  ++   +++ +      +   +IT R  R  + +KA ++     G
Sbjct: 153 ---AQLRRQIRQCEQQIRGQLSEMIRGKNSRYLSDAVITMRSDRYVIPVKAEYRNQF-GG 208

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           +  + S++G T F+EPK  VE NN   ++   E  E   IL+ L  EI    +EI+    
Sbjct: 209 MVHDQSATGQTLFIEPKAIVELNNRRQQMKVEEKEEVQRILAQLIQEIMPHRQEIQQNAY 268

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            + ++D+  A+A  A  M    P +S+    SF  +      +HPLL             
Sbjct: 269 HLGQLDVIQAKAKLAAEMKACIPEMSTTQSFSFLQA------RHPLL------------- 309

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             NP                    +  VP DI +  E + ++ITGPNTGGKT ++KT+GL
Sbjct: 310 --NP--------------------ETVVPNDIYLGEEFQSLLITGPNTGGKTITLKTVGL 347

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM + G+ +P      +  FD I+ DIGD QS+EQ+LSTFSGH+  I+ IL+ V R S
Sbjct: 348 LQLMLQTGMAIPVAEESTMTIFDQIMVDIGDEQSIEQSLSTFSGHMKNIIQILDRVGRHS 407

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LVL+DE+G+GTDP EG ALA +IL  L  +  L + TTHY +L      +    NA+ EF
Sbjct: 408 LVLLDELGAGTDPQEGAALAIAILNRLLQKGALTLCTTHYPELKVYAYNEPHTCNASMEF 467

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LVERLRPER 542
            ++TL PTYR+L G+ G SNA  I+  +G D  +I  A++           ++E+L   R
Sbjct: 468 DVQTLSPTYRLLIGAPGSSNAFEISLRLGLDPTLITEAKENMDHQTGDLANMIEQLENAR 527

Query: 543 QQHRKSE-LYQSLMEERRKLESQARTA-ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
           Q + + E  +   + E   L+ + + A A+   E   L +E + EA  +  +A+ ++AKE
Sbjct: 528 QGYEEKEHAFTEKLSETEALQKELKEAFAAFKKEKAHLLKEAKKEANQVVEKAS-VEAKE 586

Query: 601 TQQVQQELNFAKVQIDT-VVQDFENQLRDASADEINSLIKESESAIA--AIVEAHRPDDD 657
              + Q+L   +  +DT  V++ E     A+  ++N L  E E  +    +++  +    
Sbjct: 587 ---IIQDLKEKQEHLDTKAVKEHE---LIAAQTQLNHLKSEEEQHLLKNKVLQREKKKQA 640

Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
            +V            G++V V+S G +  T+V  P  D T  VQ G +++++
Sbjct: 641 LAV------------GDEVLVESYGQR-GTLVR-PFKDGTWEVQLGILKMKL 678


>gi|431122660|ref|ZP_19498357.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1613]
 gi|430567605|gb|ELB06682.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1613]
          Length = 642

 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 162/511 (31%), Positives = 257/511 (50%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S L K          I + +I ++     + IKAS+K  + DG  ++ S+ G T 
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTV 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  +L+ LT  IA++E+ I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEKAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            F++ ++G+ P ++   H+       I+  +HP L                         
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  VP+D+++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKKGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|290889939|ref|ZP_06553025.1| hypothetical protein AWRIB429_0415 [Oenococcus oeni AWRIB429]
 gi|419757832|ref|ZP_14284157.1| MutS family ATPase [Oenococcus oeni AWRIB304]
 gi|419857503|ref|ZP_14380209.1| MutS family ATPase [Oenococcus oeni AWRIB202]
 gi|421184273|ref|ZP_15641697.1| MutS family ATPase [Oenococcus oeni AWRIB318]
 gi|421186067|ref|ZP_15643462.1| MutS family ATPase [Oenococcus oeni AWRIB418]
 gi|421187983|ref|ZP_15645324.1| MutS family ATPase [Oenococcus oeni AWRIB419]
 gi|421190064|ref|ZP_15647368.1| MutS family ATPase [Oenococcus oeni AWRIB422]
 gi|421192044|ref|ZP_15649313.1| MutS family ATPase [Oenococcus oeni AWRIB548]
 gi|421193207|ref|ZP_15650458.1| MutS family ATPase [Oenococcus oeni AWRIB553]
 gi|421194500|ref|ZP_15651720.1| MutS family ATPase [Oenococcus oeni AWRIB568]
 gi|421197349|ref|ZP_15654526.1| MutS family ATPase [Oenococcus oeni AWRIB576]
 gi|290480381|gb|EFD89019.1| hypothetical protein AWRIB429_0415 [Oenococcus oeni AWRIB429]
 gi|399905341|gb|EJN92784.1| MutS family ATPase [Oenococcus oeni AWRIB304]
 gi|399966656|gb|EJO01176.1| MutS family ATPase [Oenococcus oeni AWRIB419]
 gi|399967557|gb|EJO02030.1| MutS family ATPase [Oenococcus oeni AWRIB318]
 gi|399967711|gb|EJO02177.1| MutS family ATPase [Oenococcus oeni AWRIB418]
 gi|399969991|gb|EJO04297.1| MutS family ATPase [Oenococcus oeni AWRIB548]
 gi|399970864|gb|EJO05154.1| MutS family ATPase [Oenococcus oeni AWRIB422]
 gi|399973189|gb|EJO07375.1| MutS family ATPase [Oenococcus oeni AWRIB553]
 gi|399975577|gb|EJO09628.1| MutS family ATPase [Oenococcus oeni AWRIB576]
 gi|399977918|gb|EJO11889.1| MutS family ATPase [Oenococcus oeni AWRIB568]
 gi|410497767|gb|EKP89236.1| MutS family ATPase [Oenococcus oeni AWRIB202]
          Length = 795

 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 200/727 (27%), Positives = 362/727 (49%), Gaps = 84/727 (11%)

Query: 23  LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           LL+QTS AL + + +  L +    D+  I        +L  SE+  ++ +L++   +   
Sbjct: 46  LLDQTSDALLIDRRRGGLPIRKTNDLTEIFKRLKLKAVLGTSELADLKSSLQSGQEISDF 105

Query: 82  L-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
           + T   E+  ++L++   +L ++      + L +++   +D +   +LD ASE+L  IR 
Sbjct: 106 IATIKDEIWSENLRQ---ILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHIRK 161

Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
                  N+ +LL K+      A  + +P+I+ R   + + +K+ ++     G+  + S 
Sbjct: 162 NISTTQNNVRTLLVKMTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQSQ 219

Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
           SG T ++EP+  V+ NN    L  ++I E  +IL  ++ ++     ++K   D + E+DL
Sbjct: 220 SGLTLYIEPQATVDLNNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGELDL 279

Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
             A+A  A  M+ + P      H++ +  I+++  +HPLL   S                
Sbjct: 280 IQAKAKLANSMNAIKP------HLNDEKVIDLKNARHPLLASDS---------------- 317

Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
                               V  DI++  +   ++ITGPNTGGKT  +KTLGL  LM++ 
Sbjct: 318 --------------------VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMAQT 357

Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
           G+++ A +   +  F+ I ADIGD QSLEQ+LSTFS H+  I +IL+   R SLVL+DE+
Sbjct: 358 GIFITAGSDSSIYVFNNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLDEL 417

Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
           G+GTDP EG ALA +I++ L  R  L ++TTHY +L    D+     NA+ EF   T  P
Sbjct: 418 GAGTDPGEGAALAMAIVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTFSP 477

Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
           TYR+L G  G SNA+ I++ +GF+  I++ A+  V+   P+ Q+   + L + L+ +RR 
Sbjct: 478 TYRLLLGVPGQSNAIAISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQRRD 532

Query: 561 L---ESQARTAAS--------LHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQVQQ 606
           L   E++ R   S        L+ ++ +  +    E  D   +A H+ +   +E++Q+  
Sbjct: 533 LSKEENELRNQLSRAEQERKQLNQQLNEFEQNKAKEIMDAKNKANHIVSSVRQESKQLLD 592

Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
           ++   +++  +     E QL+   AD+I+ L +++      +++  +    F V      
Sbjct: 593 QIRRERLKAGSSTGKNEQQLKKI-ADQIDDLHQDTSLEKNRVLKRAKSAKQFRV------ 645

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
                 GE+V V S      T+++   + +   VQ G +++ V +N++  +   + K   
Sbjct: 646 ------GEEVMVSSYHQS-GTIIDKISNHEWQ-VQLGILKMNVDENDLEKLSTDQEKKIN 697

Query: 727 NPAPRLR 733
            P  R++
Sbjct: 698 EPVHRVK 704


>gi|404483872|ref|ZP_11019087.1| MutS2 family protein [Clostridiales bacterium OBRC5-5]
 gi|404342884|gb|EJZ69253.1| MutS2 family protein [Clostridiales bacterium OBRC5-5]
          Length = 785

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 216/727 (29%), Positives = 345/727 (47%), Gaps = 94/727 (12%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           + E QK    T+AA+  ++ +  L LS ++DI+  L     G  LS  E+  V   L  +
Sbjct: 40  ISEIQKNQAYTTAAVDRIRLKGNLALSEVKDISDSLKRLEIGSSLSQPELMKV---LSIL 96

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
           N   K +T     + D    Y  L E  ++ + + +L++++  CI  +  I+ D AS +L
Sbjct: 97  NAASKAITYGLHSEADD---YDVLEEYFRSLDEIKDLKKELSRCIISEE-IMADNASPEL 152

Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAG--GIDKPLITKRRSRMCVGIKASHKYLLPDG 193
             IR    R ++ ++S +      I  A    +   +IT+R    C+ IK+ +K  +  G
Sbjct: 153 SHIR----RKIKQINSKMHTELNNILNAHREYLMDAVITQRDGAYCLPIKSEYKNKVS-G 207

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           +  + SS+G+T F+EP   +  NN    L+  E  E   IL  L+   A+   E++    
Sbjct: 208 VVHDQSSTGSTVFIEPIAVIRMNNELKSLAMDEKKEIEKILENLSLLAAQYIEELRENAK 267

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            ++ +D  +A+A  ++ M+   P  +S+ +      INI+  +HPLL    +        
Sbjct: 268 TLIFLDFVYAKANLSKKMNASEPKFNSKHY------INIKEGRHPLLDAKKV-------- 313

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
                                      VPI+I +     +++ITGPNTGGKT S+KT+GL
Sbjct: 314 ---------------------------VPINISLGDTYDLLIITGPNTGGKTVSLKTVGL 346

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
            +LM ++GL++PA     L  F  + ADIGD QS+EQ+LSTFSGH+  IV IL      S
Sbjct: 347 FTLMGQSGLHIPAFEGSELSVFTDVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADANS 406

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           L L DE+ +GTDP+EG ALA SIL +L       + TTHY++L      +   ENA+ EF
Sbjct: 407 LCLFDELCAGTDPTEGAALAISILSFLHRMQSRCIATTHYSELKVFALNEPGVENASCEF 466

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPER 542
            + TL PTYRIL G  G SNA  IA  +G    II  A           + L+ RL  +R
Sbjct: 467 DVATLSPTYRILIGVPGKSNAFAIAGKLGLPDYIISEADTHLEKDAKDFEDLLTRLENDR 526

Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
           Q   K +L  S+ + +R++ES  R        +     +I +EAK+  R+    +AKET 
Sbjct: 527 QIIEKDKL--SIQKYKREIESLKRHYDKQEENLAARKEKILEEAKEAARKILE-EAKETA 583

Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
                        DT+    +N  + AS   + S ++E  + +   +  ++      + +
Sbjct: 584 D------------DTI----KNINKIASGAGLGSALEEQRTRLRESI--NKNTKTAGIKQ 625

Query: 663 TNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI-- 717
               +  P   + G+ VHV SL      V  +P       VQ G +R +V  +++  +  
Sbjct: 626 NTVKAKKPKELKLGDSVHVISLNLD-GIVSSLPNQSGNFFVQMGILRSQVNISDVALVEE 684

Query: 718 PNSKRKN 724
           P +K +N
Sbjct: 685 PGNKPEN 691


>gi|417963813|ref|ZP_12605678.1| MutS2 protein [Candidatus Arthromitus sp. SFB-3]
 gi|380331723|gb|EIA22709.1| MutS2 protein [Candidatus Arthromitus sp. SFB-3]
          Length = 654

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 172/527 (32%), Positives = 269/527 (51%), Gaps = 60/527 (11%)

Query: 12  PFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
           PF  +++E  + LN+TS A+  ++  S P D   ++D+   L     G  +S  EI  + 
Sbjct: 36  PFS-TIDEVIQNLNETSEAIEFIKEFSSP-DFVGLDDVYIYLEKIDKGGSVSIKEIYKIG 93

Query: 70  RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI-DCKLLIIL 128
            TL+ +  V   L++ +    + L  Y        N +    LE+ I   I D +   I 
Sbjct: 94  TTLKCIREVKDYLSKRS---LNYLNYY------YDNISTFKYLEDDIFKAIKDGEE--IS 142

Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
           D AS++L  IR E K    ++   L ++      +  + + + T R  R C+ +K+ +K 
Sbjct: 143 DFASDNLFKIRKELKSKTASIKRKLSEILKT--YSKYLQENVFTVRGDRYCIPVKSEYKS 200

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +  GI  N SSSG+TYF+EP   V  NN    L  +E  E   IL L+  +I  S   I
Sbjct: 201 QIQ-GIIHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSIDNI 259

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
              +  +  ++  F +  ++  +DG+ P ++    +   S+      +HPL+        
Sbjct: 260 YLSIKIIYSLEFIFGKGNYSIEIDGIKPDVNDGEDIYLISA------RHPLIN------- 306

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                     + DV                  VP+++    + + ++ITGPNTGGKT ++
Sbjct: 307 ----------REDV------------------VPLNLDFTKDRKAIIITGPNTGGKTVTL 338

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KTLGL  LM+ +GL++PA    R+ + + I ADIGD QSLEQNLSTFS HI  I+ + + 
Sbjct: 339 KTLGLMHLMAHSGLFIPAYEGSRVMFLNEIFADIGDEQSLEQNLSTFSSHIKNIISMTDN 398

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
           +  ++LVL+DE+GSGTDP EG ALA SI+++  +     + TTHY+ L          EN
Sbjct: 399 IKDKTLVLLDEVGSGTDPEEGAALAISIMEHFINSGCKLMGTTHYSQLKTYAINSDNVEN 458

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           A+ EF ++TLRPTYR+  G  G SNA  IA S+G ++ II+ AQK +
Sbjct: 459 ASVEFDVKTLRPTYRLNVGIPGKSNAFIIADSLGMNQSIIENAQKYL 505


>gi|340755208|ref|ZP_08691905.1| MutS2 protein [Fusobacterium sp. D12]
 gi|419840320|ref|ZP_14363712.1| putative recombination and DNA strand exchange inhibitor protein
           [Fusobacterium necrophorum subsp. funduliforme ATCC
           51357]
 gi|421499445|ref|ZP_15946489.1| MutS2 family protein [Fusobacterium necrophorum subsp. funduliforme
           Fnf 1007]
 gi|313685859|gb|EFS22694.1| MutS2 protein [Fusobacterium sp. D12]
 gi|386908352|gb|EIJ73049.1| putative recombination and DNA strand exchange inhibitor protein
           [Fusobacterium necrophorum subsp. funduliforme ATCC
           51357]
 gi|402269698|gb|EJU19022.1| MutS2 family protein [Fusobacterium necrophorum subsp. funduliforme
           Fnf 1007]
          Length = 778

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 198/701 (28%), Positives = 340/701 (48%), Gaps = 92/701 (13%)

Query: 39  LDLSTIEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
           LD+  ++DI  +     + G  L   E+  +   LR       +L        + L +Y 
Sbjct: 63  LDVRHLKDICSLTEKIKLIGTYLEVDELWDINMNLRFFRIFQAQL--------EDLGKYK 114

Query: 98  PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
            L + ++  + L  +E+ I   +D +  I  D AS DL  IR  +K   +N+     ++ 
Sbjct: 115 ALRDYMRQVSPLRLIEDLISKAVDSEKQI-KDEASLDLRDIRIHKKMLAQNIRRKFDELF 173

Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
            +   A    + ++T+R  RM V +K   K L+  GI  + SSSG T F+EP   V  NN
Sbjct: 174 EEASIAVAFQERIVTERDGRMVVPVKVDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNN 232

Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
               L   E  E   IL  L+ +I   + E+  +   +L +D   A+A F   ++  C +
Sbjct: 233 KMRELETKEKEEIRKILLRLSEQIRNHQDEMYKIGTMILYLDRLQAKANFG--LEEACHV 290

Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
            + Q        + +E  +HP +    +                                
Sbjct: 291 PTIQG----KEILYLEKARHPFIPKEKV-------------------------------- 314

Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
              VP+  ++  + R+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  H ++ +F  
Sbjct: 315 ---VPLTFEIGKDYRILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEHSKIGFFQG 371

Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
           + ADIGD QS+EQ+LS+FS H++ + +IL  V R  LVL+DE+GSGTDP+EG A A SI+
Sbjct: 372 VFADIGDEQSIEQSLSSFSAHVTNLQEILREVHRNCLVLLDELGSGTDPTEGSAFAMSII 431

Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
            YL+++   A++TTHY+++      +   E A+ EF   TL PTYR+L G  G+SNAL I
Sbjct: 432 DYLKEKKCNAIITTHYSEVKAHGYNEEGIETASMEFDTATLSPTYRLLMGIPGESNALTI 491

Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 577
           AK +G  + II +AQ  +       + ++K EL  +       +++++ +   + AE+  
Sbjct: 492 AKRLGVPQDIIDKAQSYIS------EDNKKIELMIN------NIKNKSESLDRMQAELEG 539

Query: 578 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI-DTVVQDFE---NQLRDASADE 633
           L            R AA +  ++ ++ ++ L   K +I     +D E   N++R  ++  
Sbjct: 540 L------------REAARMNQQKWEEERRNLEREKNEILKKAYEDSEKMMNEMRAKASAL 587

Query: 634 INSLIKESESAIAA---------IVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLG 682
           I  + KE  S   A         +  A + + + ++S T T      F  G++V VK++ 
Sbjct: 588 IEKIQKEENSKEQAKQIQKNLNMLSSALKEEKNKTISITKTMKKKANFKEGDRVFVKNI- 646

Query: 683 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           ++ A+V+++    ++  VQ G +++ V  + IR     K K
Sbjct: 647 NQFASVLKINAMKESAQVQAGILKLEVPFDEIRVTEEKKEK 687


>gi|335429528|ref|ZP_08556426.1| recombination and DNA strand exchange inhibitor protein [Haloplasma
           contractile SSD-17B]
 gi|334889538|gb|EGM27823.1| recombination and DNA strand exchange inhibitor protein [Haloplasma
           contractile SSD-17B]
          Length = 780

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 171/515 (33%), Positives = 268/515 (52%), Gaps = 50/515 (9%)

Query: 23  LLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           LL +T  AL ++     L    I DI   +  A  G +L+P+E+  +   +   N + K 
Sbjct: 45  LLTETDEALRLLYRLGDLPFGGITDIRPHIKRATIGGILNPNELLKISTFIYGSNQIRKY 104

Query: 82  LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
              AA+++ + ++    ++  ++N   L++L  +I  CID     ++D AS  L+ IR +
Sbjct: 105 ---AAKMEQEQIES-DKIVFYIENLFNLSDLSREINRCID-DFSNVVDDASPKLKDIRNQ 159

Query: 142 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 201
            K N   +   L  +     Q   + + LIT R  R  V +K  +K     GI  + S S
Sbjct: 160 IKTNEARIKDRLNSILQS--QKDLLTEQLITIRNDRFVVPVKVENKNTFG-GIIHDQSQS 216

Query: 202 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 261
           G T+++EPK  VE NN    L N E  E   IL  LT  +++   E++  +  +  +D  
Sbjct: 217 GNTFYIEPKMVVEVNNRIQNLKNEEKREIEKILRELTLSVSEYVGELQENVYNIKLLDFI 276

Query: 262 FARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 321
           + +A +A+  +   P ++ +  V    +      +HPL+                P    
Sbjct: 277 YTKAKYAKATNATKPTINDEGFVHLIKA------RHPLI----------------P---- 310

Query: 322 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 381
                           D  VP DI +  E   ++ITGPNTGGKT ++KTLGL +LM +AG
Sbjct: 311 ---------------EDEIVPNDIMLGQEFTSIIITGPNTGGKTVTLKTLGLLTLMMQAG 355

Query: 382 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIG 441
           L +PA  H +L  FD + ADIGD QS+EQ+LSTFS H+  I++I++ ++  SLVL+DE+G
Sbjct: 356 LLVPANEHSKLAVFDNVFADIGDEQSIEQSLSTFSSHMKTIINIVDNITINSLVLLDELG 415

Query: 442 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 501
           +GTDP EG ALA S+L Y R R    + TTHY +L        +  NA+ EF++ETL+PT
Sbjct: 416 AGTDPKEGAALAMSLLDYFRKRGSRIIATTHYPELKTYAYNTEKVINASVEFNVETLKPT 475

Query: 502 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           Y++L G  G SNA  I+K +G +  +I+ A++ V+
Sbjct: 476 YKLLIGIPGRSNAFEISKRLGLNELVIEDAREKVD 510


>gi|167044223|gb|ABZ08904.1| putative Smr domain protein [uncultured marine microorganism
           HF4000_APKG5H11]
          Length = 827

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 209/736 (28%), Positives = 351/736 (47%), Gaps = 81/736 (11%)

Query: 8   KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           +A  P    LE + +    + A   + Q   L+    ED   +L  A+ G LL   E+  
Sbjct: 65  RALTPTRDLLEIATRQQETSEAKQYLEQGGGLEFGPEEDFRELLQRALLGGLLRGEELFL 124

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYS--PLL-ELLKNCNFLTELEEKIGFCIDCKL 124
           +R  LRA           A  D   L R+   PLL  + +N   L +LE  I   I    
Sbjct: 125 IRELLRA-----------ARYDRTELGRHEEIPLLTSISENIPELGDLERAISGAI-SPA 172

Query: 125 LIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
             +LD AS  L  +R E +     L+ ++++   ++ +A  + +PLIT+R  RM + IKA
Sbjct: 173 GEVLDNASPVLHNLRREARNAQNRLNEIMERNLRRLQRAELVQEPLITQRNGRMVLLIKA 232

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA---ILSLLTAEI 241
             +Y +P GI  +VS SGAT F+EP  A++  N   R   + +AEE     IL  L+  +
Sbjct: 233 EMRYRVP-GIVHDVSDSGATVFVEPMPAIDMGN---RWREARLAEEREVERILRQLSGMV 288

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
             S  ++   +D +  +DL  A+A  +  ++ V P +S Q     D  + +   +HPLL 
Sbjct: 289 GLSGEDLLLTLDLIARLDLDMAKARHSAAINAVPPWVSDQE--VADRHLKLVRARHPLLT 346

Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
           G+                                     VP+ + ++ +  V++ITGPN 
Sbjct: 347 GTV------------------------------------VPVSVDLDRDQGVLLITGPNA 370

Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
           GGKT ++KT+GL ++M++AGL++PA+     P FD + ADIGD QS++Q++STFS HIS 
Sbjct: 371 GGKTVTLKTVGLLAMMAQAGLHVPAEE-AHFPRFDGVYADIGDQQSIQQSMSTFSSHISN 429

Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
           +  I+   +  SLVL+DE+G+ TDP EG ALA+++L+Y +      V TTH+  ++    
Sbjct: 430 LKGIMSRATVHSLVLVDELGTSTDPEEGSALASAVLRYFQKIGSFVVGTTHHRGVARFVQ 489

Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
                 NA+ +    TL PTY +  G  G S AL IA  +G  +++I  A+  +  +   
Sbjct: 490 DQPGMVNASVDLDPTTLEPTYHLTLGLPGRSYALTIAARLGVPQEVIDDARSGISPV--- 546

Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
             +    EL Q L +ERR +E     A +  +E +   RE++ +  D++   A+L  +  
Sbjct: 547 --EQATEELLQELQQERRVVEELREEAETARSEAVRRQRELDVQLADVEAAKANLVEESR 604

Query: 602 QQVQQELNFAKVQIDTVVQDFE----NQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
           Q++Q+ ++    ++    +  E     Q  +A A      I+E +++ A + E  R  + 
Sbjct: 605 QELQRRISGILDRLSKAERSLEAYELRQDAEARARAETESIQEIQASRAEVREVQRQLES 664

Query: 658 FSVSETNTSSFTPQF----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
            + S         Q     G++V+++ +   +  V+      D V V  G MR ++    
Sbjct: 665 AAWSPIEVERVPWQQILKEGDRVYIRGIAQPV-EVISAADSQDRVEVLLGTMRAKI---- 719

Query: 714 IRPIPNSKRKNAANPA 729
             P+   +R+   +PA
Sbjct: 720 --PVYQLERQAEGHPA 733


>gi|428280333|ref|YP_005562068.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. natto BEST195]
 gi|291485290|dbj|BAI86365.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           subtilis subsp. natto BEST195]
          Length = 785

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 209/687 (30%), Positives = 341/687 (49%), Gaps = 72/687 (10%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
           DI G L  A  G +LSPSE   +   L AV  +   +T+ AE DG  +    PL+ +  +
Sbjct: 70  DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124

Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
               L++LE  I  CID    + LD ASE L  IR + +    R  + L+S+L+  +A  
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183

Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
                +   ++T R  R  + +K  ++     GI  + SSSGAT F+EP+  V+ NN   
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238

Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
           +    E  E   IL +LT + A+   E+ +L  +VL+ +D  FA+A +A+ +    PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297

Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
                     I ++  +HPLL                P    V N               
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320

Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
               DI++  +   +VITGPNTGGKT ++KTLGL +LM+++GL++PA        F+ + 
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376

Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
           ADIGD QS+EQ+LSTFS H+  IV ILE V+  SLVL DE+G+GTDP EG ALA SIL  
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436

Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
           +       + TTHY +L           NA+ EF +ETL PTY++L G  G SNA  I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496

Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
            +G    II +A+  +       + +    +  SL + +++ E +     S+  E   L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551

Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 639
           +E++ +  +L+ +   +  +  QQ  +++  A  + + ++ +      +  + + + LI 
Sbjct: 552 KELQQQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRTIKEEHKSFKDHELIN 611

Query: 640 ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
            ++  +   + A          +     F P  G++V V + G K  T++E  G ++   
Sbjct: 612 -AKKRLEGAMPAFEKSKKPEKPKAQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN- 666

Query: 700 VQYGKMRVRVKKNN---IRPIPNSKRK 723
           VQ G ++++VK+ +   I+  P  K++
Sbjct: 667 VQIGILKMKVKEKDLEFIKSAPEQKKE 693


>gi|153815454|ref|ZP_01968122.1| hypothetical protein RUMTOR_01689 [Ruminococcus torques ATCC 27756]
 gi|145847096|gb|EDK24014.1| MutS2 family protein [Ruminococcus torques ATCC 27756]
          Length = 791

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 218/732 (29%), Positives = 341/732 (46%), Gaps = 122/732 (16%)

Query: 5   VVQKAQIPFGKS--LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSP 62
           +++K +I FG +  +EES K L                     +I G LN+A   +LL  
Sbjct: 57  IIKKGRISFGDAAPVEESLKRL---------------------EIGGALNTA---ELL-- 90

Query: 63  SEICAV-RRTLRAV----NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
             IC +   T RA     ++  + L +  ++  D L+  +PL   ++ C  ++E E    
Sbjct: 91  -RICRLLSNTARAKSYGRHDTQEDLADCLDIYFDGLEPLTPLSNEIERC-IISEDE---- 144

Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKR 174
                    I D AS  L+ IR    R++ NL+  +    + +        +   LIT R
Sbjct: 145 ---------ISDDASSALKHIR----RSINNLNDRVHTTLSGLVNGSLRTYLQDALITMR 191

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R C+ +KA ++  +  G+  + S+SG+T F+EP   V+ NN    L   E  E   IL
Sbjct: 192 GDRYCIPVKAEYRSQV-QGLIHDQSASGSTLFIEPMAIVKLNNDLKELYVQEQDEIRKIL 250

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
           + L+ E A+   EI+     + ++D  FAR   A  M    PIL+ +        I I  
Sbjct: 251 ASLSEEAAQYIEEIRTDYRSLTDLDFIFARGALALTMRASRPILNEEGR------IRIRE 304

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
            +HPLL    +                                   VPI + +  E  ++
Sbjct: 305 GRHPLLDQKKV-----------------------------------VPITVSLGDEFSLL 329

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
           +ITGPNTGGKT S+KT+GL +LM +AGL++PA +   +  F  + ADIGD QS+EQ+LST
Sbjct: 330 IITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAGDRSEIAVFRQVYADIGDEQSIEQSLST 389

Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
           FS H++ IV  L+ V   SLVL DE+G+GTDP+EG ALA +IL +L  R    + TTHY+
Sbjct: 390 FSSHMTNIVSFLKKVDDRSLVLFDELGAGTDPTEGAALAIAILSHLHKRNIRTMATTHYS 449

Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
           +L          ENA  EF +E+LRPTYR+L G  G SNA  I+  +G    II  A+K 
Sbjct: 450 ELKIYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPGYIIDDAKK- 508

Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
               R   Q     +L   L   RR +E +    A+   E   L R+   + + L+ +  
Sbjct: 509 ----RLSEQDVSFEDLLSDLEASRRTIEKEQAEIAAYKKEAETLKRQAVQKQEKLEEQRD 564

Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESE--------SAI 645
            +  +  ++    L  AK   D  +++F    + + SA E+    KE E        ++ 
Sbjct: 565 RIIREANEKANAILREAKEVADETLRNFHKFGKENISAAEME---KERERLRKKIKDTSA 621

Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
           +A ++ ++P   +  S+        + GE V V S+ +   T+  +P     V VQ G +
Sbjct: 622 SASLKTNKPKKTYKPSDF-------KLGESVKVLSM-NLTGTIGSLPDARGNVTVQMGIL 673

Query: 706 RVRVKKNNIRPI 717
           R +V  +++  I
Sbjct: 674 RSQVNISDLEII 685


>gi|452975414|gb|EME75233.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           sonorensis L12]
          Length = 785

 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 218/711 (30%), Positives = 352/711 (49%), Gaps = 78/711 (10%)

Query: 15  KSLEESQKL---LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
           +SLEE +KL   +++    L +  S P     + DI   L  A  G LLSP+E   +   
Sbjct: 38  RSLEEVKKLQEEVDEAGTVLRLKGSAPF--GGLSDIRKALKRAEIGSLLSPAEFTEISGL 95

Query: 72  LRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
           L A   + K   E    DG  +    P L +  +    L++LE+ I  CID    + LD 
Sbjct: 96  LYAAKQM-KHFLEGLFEDGVEI----PFLHQYAEKLIPLSDLEKDINSCIDDHGEV-LDH 149

Query: 131 ASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           ASE L  IR + +    R  + L+++L+  +AQ      +   +IT R  R  + +K  +
Sbjct: 150 ASESLRGIRTQLRTLESRIRDRLEAMLRSSSAQKM----LSDTIITIRNDRFVIPVKQEY 205

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           +     GI  + SSSGAT F+EP+  V+ NN   +   +E  E   IL +LT + A+   
Sbjct: 206 RSSY-GGIVHDQSSSGATLFIEPQVIVDMNNSLRQAKVNEKQEIERILRMLTDKTAEHTD 264

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           E+ + +  +  +D  FA+A +A+    V PI+++  +V    +      +HPLL      
Sbjct: 265 ELFHNVKVLQTLDFIFAKAKYAKATKAVKPIVNADGYVRLIQA------RHPLL------ 312

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                     P                   +D  VP DI++  E   +VITGPNTGGKT 
Sbjct: 313 ----------P-------------------ADQVVPNDIELGGEYTTIVITGPNTGGKTV 343

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KTLGL +LM+++GL++PA        FD + ADIGD QS+EQ+LSTFS H+  IVDIL
Sbjct: 344 TLKTLGLLTLMAQSGLHVPAGEGSETAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDIL 403

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           + ++  SLVL DE+G+GTDP EG ALA SIL  +       + TTHY +L          
Sbjct: 404 KDMTENSLVLFDELGAGTDPQEGAALAISILDEVYQTGARVIATTHYPELKAYGYNRDNV 463

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
            NA+ EF +ETL PTY++L G  G SNA  I+K +G    +I RA     +     + + 
Sbjct: 464 INASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHLIGRA-----KAEMTAEHNE 518

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
              +  SL + +++ E++     ++ AE   L+R+++ +  +   +   L  +  Q+  +
Sbjct: 519 VDTMIASLEDSKKRAETELAETEAIRAEAETLHRDLKRQISEWQEKKDRLYEEAEQKAAE 578

Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSET 663
           ++  A  + D ++Q       D  A + + LI   K  E A+ +  +  +P       + 
Sbjct: 579 KVREAVKEADEIIQSLRMIKEDHKAFKDHELIDAKKRLEEAVPSFEKTKKP----VQKKM 634

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
           +  +  P  G++V V + G K  T++E   D +   VQ G ++++VK+ ++
Sbjct: 635 DKRALKP--GDEVKVLTFGQK-GTLLE-KTDANEWNVQIGILKMKVKEKDL 681


>gi|417962044|ref|ZP_12604329.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
           SFB-2]
 gi|380331334|gb|EIA22399.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
           SFB-2]
          Length = 706

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 192/607 (31%), Positives = 298/607 (49%), Gaps = 97/607 (15%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           I D AS++L  IR E K    ++   L ++     +   + + + T R  R C+ +K+ +
Sbjct: 64  ISDFASDNLFKIRKELKSKTASIKRKLSEILKTYSKY--LQENVFTVRGDRYCIPVKSEY 121

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           K  +  GI  N SSSG+TYF+EP   V  NN    L  +E  E   IL L+  +I  S  
Sbjct: 122 KSQIQ-GIIHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSID 180

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
            I   +  +  ++  F +  ++  +DG+ P ++    +   S+      +HPL+      
Sbjct: 181 NIYLSIKIIYSLEFIFGKGNYSIEIDGIKPDVNDGEDIYLISA------RHPLIN----- 229

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                       + DV                  VP+++    + + ++ITGPNTGGKT 
Sbjct: 230 ------------REDV------------------VPLNLDFTKDRKAIIITGPNTGGKTV 259

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KTLGL  LM+ +GL++PA    R+ + + I ADIGD QSLEQNLSTFS HI  I+ + 
Sbjct: 260 TLKTLGLMHLMAHSGLFIPAYEGSRVMFLNEIFADIGDEQSLEQNLSTFSSHIKNIISMT 319

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           + +  ++LVL+DE+GSGTDP EG ALA SI+++  +     + TTHY+ L          
Sbjct: 320 DNIKDKTLVLLDEVGSGTDPEEGAALAISIMEHFINSGCKLMGTTHYSQLKTYAINSDNV 379

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
           ENA+ EF ++TLRPTYR+  G  G SNA  IA S+G ++ II+ AQK             
Sbjct: 380 ENASVEFDVKTLRPTYRLNVGIPGKSNAFIIADSLGMNQSIIENAQKY------------ 427

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDL-DRRAAHLKAKETQ 602
                  L E+  K ES  +T      E +   REIE   +E K L D+    L+  E +
Sbjct: 428 -------LSEDIIKFESIIKTLEEKTTEAIKNNREIEILREENKILNDKLKKRLENIEKE 480

Query: 603 QVQ----------QELNFAKVQIDTVVQDFENQLRDASADEINSL----IKESESAIAAI 648
           +++          Q ++ AK +ID V       L+  +A E+N +    +K+ ESA   I
Sbjct: 481 KLRIIESAKDEGYQIISNAKGEIDKV-------LKIINALEMNGIDLSSVKDLESARREI 533

Query: 649 VEAHRPDDDFSVSE----TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
               + D    ++E     N+S F  +F  G    +K +G  +  ++E P     VLVQ 
Sbjct: 534 --KKKIDKQNKMNEEKSFKNSSKFNIEFKSGMTAFLKRIGQNV-IILENPDSKGNVLVQA 590

Query: 703 GKMRVRV 709
           G +++ V
Sbjct: 591 GVLKLTV 597


>gi|225026876|ref|ZP_03716068.1| hypothetical protein EUBHAL_01130 [Eubacterium hallii DSM 3353]
 gi|224955800|gb|EEG37009.1| MutS2 family protein [Eubacterium hallii DSM 3353]
          Length = 791

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 185/562 (32%), Positives = 269/562 (47%), Gaps = 77/562 (13%)

Query: 91  DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
           D +  Y  L       + L  L ++I  CI  +  I  D AS  L+ IR E K+   ++ 
Sbjct: 110 DDIMAYDSLNSYFGELDSLEFLYQRITQCILSEDEIS-DDASSALKDIRREIKQTNISIH 168

Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
           + L  V         +   LIT R  R CV +K  ++   P G+  + SSSG+T F+EP 
Sbjct: 169 NKLTSVINSQNNKTMLQDALITVRNGRYCVPVKTEYRNAFP-GMIHDQSSSGSTLFIEPM 227

Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
             V+ NN    L   E  E   IL  L+A+ A   RE++     + ++D  FA+A +A+ 
Sbjct: 228 AVVQLNNHLKELDIKEKMEIEKILQSLSAQAASCSRELEENQKILTKLDFIFAKAKYAKE 287

Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
             G  PI ++      D  ++I+  +HPLL               +P K           
Sbjct: 288 YQGTEPIFNT------DGIVDIKQGRHPLL---------------DPKKV---------- 316

Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
                     VPI I +  +  ++++TGPNTGGKT S+KT+GL  LM +AGL++PA    
Sbjct: 317 ----------VPIHIYIGEDFNMLLLTGPNTGGKTVSLKTVGLFQLMGQAGLHIPAFQGS 366

Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
           RL  F  I ADIGD QS+E NLSTFS H++ +V IL+     SLVL+DE+  GTDP+EG 
Sbjct: 367 RLAVFSDIFADIGDEQSIEMNLSTFSSHMTNLVHILDEADPNSLVLLDELCGGTDPTEGA 426

Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
           ALA +IL  L       V TTHYA+L          ENA  EF LETL PTYR+L G  G
Sbjct: 427 ALAIAILDDLHTGKIRTVATTHYAELKMYAMDTPGVENACCEFDLETLSPTYRLLIGIPG 486

Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
            SNA +I++ +G    II++A                          R ++++ A    +
Sbjct: 487 KSNAFSISERLGLPDYIIEQA--------------------------RSQIDATAIDFEN 520

Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
           + +E+     EIE E  +L         K  Q+++   N  K + D + +  +  LRDA 
Sbjct: 521 MLSELEKNKAEIEKEQSEL--------YKTKQEIENLKNSLKEKQDDIKEKRDKMLRDAR 572

Query: 631 ADEINSLIKESESAIAAIVEAH 652
            +  N L +  E A  +I + H
Sbjct: 573 EEARNILEEAKEVADESIRKYH 594


>gi|188590038|ref|YP_001921612.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium botulinum E3 str. Alaska E43]
 gi|238689679|sp|B2V583.1|MUTS2_CLOBA RecName: Full=MutS2 protein
 gi|188500319|gb|ACD53455.1| MutS2 family protein [Clostridium botulinum E3 str. Alaska E43]
          Length = 785

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 206/727 (28%), Positives = 344/727 (47%), Gaps = 100/727 (13%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
           +P+  + E + +L     A   +M+     +  + DI  IL  A  G  L+P ++  V  
Sbjct: 35  VPYDNTYEINNRLEESNEALEILMKKGNPPIEGLCDIGDILQRAKKGGTLTPEQLLKVLG 94

Query: 71  TL---RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
            L   R +   +K+  E  E+   S  +   L  +L   N L +  E+     D     +
Sbjct: 95  MLTATRRMQEFFKR--EDQEV---SFPKLEDLAYILAPINDLEKEIERSILSEDE----V 145

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKAS 185
            D AS  L  IR    R+++  +S +++    I ++    +   L T R  R  + +KA 
Sbjct: 146 SDNASTTLYNIR----RSLKEKNSSVREKINSIVRSNSKYLQDSLYTIRGDRYVIPVKAE 201

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           +K  +P G+  + SS+GAT F+EP G V  NN    L   E AE   +LS L+ ++  + 
Sbjct: 202 YKSSVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIDRVLSALSLKVKMNA 260

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
              +     +  +D  F++  +A  ++ + P+      V  D   NI   +HPL+     
Sbjct: 261 EHCESNFKILTNLDFIFSKGKYACELNAIKPM------VRDDGIFNIMSGRHPLIE---- 310

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                                           D  VP+D+ +  E   ++ITGPNTGGKT
Sbjct: 311 -------------------------------KDKVVPLDVVLGDEFDTLMITGPNTGGKT 339

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KT+GL  +M+ +GL +PA ++  + +F  + ADIGD QS+EQ+LSTFS H++ IV+I
Sbjct: 340 VTLKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIEQSLSTFSSHLTNIVNI 399

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           +E  +R+SL+L DE+G GTDP+EG ALA +I++ L  +    + TTHY++L        R
Sbjct: 400 MEYDNRQSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKLIATTHYSELKAYALNKER 459

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
            ENA+ EF + TLRPTYR+L G  G SNA  I+K IG  +++I  A+  + +   E +  
Sbjct: 460 VENASVEFDINTLRPTYRLLIGVPGKSNAFEISKRIGLGKEVIDCAKNYMSKENLEFEG- 518

Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKAKETQQ 603
               L ++L E+    +  AR A  +  E  +L ++ E + + L+  +  A++ A+E  +
Sbjct: 519 ----LIRNLQEKSIIAKKDARDAKVIKDEADNLKKKYEQKLERLEKVKDKAYMDAREEAK 574

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE-----SAIAAIVEAHRP--DD 656
                         +V + +++     ADEI   ++E E     S     +E  R    D
Sbjct: 575 -------------KIVANAKDE-----ADEILKAMRELEKLGIGSGGRQRLEEERKKLKD 616

Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLG--------DKLATVVEVPGDDDTVLVQYGKMRVR 708
                E N        GE +   +LG        ++   V+ +P +   V V+ G M++ 
Sbjct: 617 SLEEKEKNLYKMKENDGEVLEKVALGMEAFLPSLNQTVVVISMPDNRGEVQVEAGIMKIS 676

Query: 709 VKKNNIR 715
           VK  ++R
Sbjct: 677 VKLKDLR 683


>gi|118586380|ref|ZP_01543830.1| DNA mismatch repair protein [Oenococcus oeni ATCC BAA-1163]
 gi|118433197|gb|EAV39913.1| DNA mismatch repair protein [Oenococcus oeni ATCC BAA-1163]
          Length = 795

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 202/729 (27%), Positives = 364/729 (49%), Gaps = 88/729 (12%)

Query: 23  LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           LL+QTS AL + + +  L +    D+  I        +L  SE+  ++ +L++     ++
Sbjct: 46  LLDQTSDALLIDRRRGGLPIRKTNDLTEIFKRLKLKAVLGTSELADLKSSLQS----GQE 101

Query: 82  LTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELI 138
           +++   +  D +   + L ++L   N LT+   L +++   +D +   +LD ASE+L  I
Sbjct: 102 ISDFIAMIKDEIWSEN-LRQILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHI 159

Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
           R        N+ +LL K+      A  + +P+I+ R   + + +K+ ++     G+  + 
Sbjct: 160 RKNISTTQNNVRTLLVKMTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQ 217

Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
           S SG T ++EP+  V+ NN    L  ++I E  +IL  ++ ++     ++K   D + E+
Sbjct: 218 SQSGLTLYIEPQATVDLNNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGEL 277

Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
           DL  A+A  A  M+ + P      H++ +  I+++  +HPLL   S              
Sbjct: 278 DLIQAKAKLANSMNAIKP------HLNDEKVIDLKNARHPLLASDS-------------- 317

Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
                                 V  DI++  +   ++ITGPNTGGKT  +KTLGL  LM+
Sbjct: 318 ----------------------VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMA 355

Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
           + G+++ A +   +  F+ I ADIGD QSLEQ+LSTFS H+  I +IL+   R SLVL+D
Sbjct: 356 QTGIFITAGSDSSIYVFNNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLD 415

Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
           E+G+GTDP EG ALA +I++ L  R  L ++TTHY +L    D+     NA+ EF   T 
Sbjct: 416 ELGAGTDPGEGAALAMAIVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTF 475

Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
            PTYR+L G  G SNA+ I++ +GF+  I++ A+  V+   P+ Q+   + L + L+ +R
Sbjct: 476 SPTYRLLLGVPGQSNAIAISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQR 530

Query: 559 RKL---ESQARTAAS--------LHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQV 604
           R L   E++ R   S        L+ ++ +  +    E  D   +A H+ +   +E++Q+
Sbjct: 531 RDLSKEENELRNQLSRAEQERKQLNQQLNEFEQNKAKEIMDAKNKANHIVSSVRQESKQL 590

Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
             ++   +++  +     E QL+   AD+I+ L +++      +++  +    F V    
Sbjct: 591 LDQIRRERLKAGSSTGKNEQQLKKI-ADQIDDLHQDTSLEKNRVLKRAKSAKQFRV---- 645

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
                   GE+V V S      T+++   + +   VQ G +++ V +N++  +   + K 
Sbjct: 646 --------GEEVMVSSYHQS-GTIIDKISNHEWQ-VQLGILKMNVDENDLEKLSTDQEKK 695

Query: 725 AANPAPRLR 733
              P  R++
Sbjct: 696 INEPVHRVK 704


>gi|325264641|ref|ZP_08131371.1| MutS2 protein [Clostridium sp. D5]
 gi|324030303|gb|EGB91588.1| MutS2 protein [Clostridium sp. D5]
          Length = 791

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 185/563 (32%), Positives = 276/563 (49%), Gaps = 77/563 (13%)

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           P+IT R  R C+ +KA ++  + +G+  + SS+G+T F+EP   V+ NN    L   E  
Sbjct: 186 PIITMRGDRYCIPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ L+A+ A    EI      + ++D  FAR   A  M+   P+L+ +       
Sbjct: 245 EIQVILARLSADTALYIEEIHNNYKLLTDLDFIFARGSLALSMNASRPVLNQEGR----- 299

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
            I I   +HPLL               +P K                     VPI + + 
Sbjct: 300 -IRIREGRHPLL---------------DPRKV--------------------VPISVTLG 323

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
            +  +++ITGPNTGGKT S+KT+GL +LM +AGL++PA +   L  F  + ADIGD QS+
Sbjct: 324 EDFTLLIITGPNTGGKTVSLKTVGLFTLMGQAGLHIPAGDRSELAIFRQVYADIGDEQSI 383

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQ+LSTFS H++ IV  L+ V   SLVL DE+G+GTDP+EG ALA +IL YL  R    +
Sbjct: 384 EQSLSTFSSHMTNIVSFLQEVDENSLVLFDELGAGTDPTEGAALAIAILSYLHKRGIRTM 443

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L          ENA  EF +E+LRPTYR+L G  G SNA  I+  +G    II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLLGIPGKSNAFAISGKLGLPDYII 503

Query: 529 QRA-QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
           + A Q L E          +   ++ L+ +   LES  RT       I    RE+E    
Sbjct: 504 EDAKQHLTE----------QDASFEDLLTD---LESGKRTIEKEREAIEAYKREVE---- 546

Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAA 647
            L  +A   + K  +Q ++ L  A  +  T++++   +L D +        KE  S   A
Sbjct: 547 ILKNQAKQKQVKIEEQRERILKEANEKAGTILRE-AKELADETMKNFRKFGKEGIS--VA 603

Query: 648 IVEAHRPDDDFSVSETNTS----------SFTP---QFGEQVHVKSLGDKLATVVEVPGD 694
            +E  R      + ET+ +          ++ P   + GE V V S+ +   TV  +P  
Sbjct: 604 EMEKERERLRQKMKETSAAGSMAVQKQKKAYKPGDFKLGESVKVLSM-NLTGTVSSLPDS 662

Query: 695 DDTVLVQYGKMRVRVKKNNIRPI 717
              + VQ G +R +V  +++  I
Sbjct: 663 RGNLTVQMGILRSQVNISDLEII 685


>gi|425056404|ref|ZP_18459857.1| MutS domain V protein [Enterococcus faecium 505]
 gi|403031896|gb|EJY43482.1| MutS domain V protein [Enterococcus faecium 505]
          Length = 642

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 162/511 (31%), Positives = 254/511 (49%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYAGFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S L K          I + +I ++     + IKAS+K  + DG  ++ S+ G T 
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTV 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  IL+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQILAALTGAIAENEEAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            F++ ++G+ P ++   H+           +HP L                         
Sbjct: 280 KFSREINGITPKINKSEHIVIKQG------RHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  VP+D+++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|313893610|ref|ZP_07827179.1| MutS2 family protein [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441881|gb|EFR60304.1| MutS2 family protein [Veillonella sp. oral taxon 158 str. F0412]
          Length = 812

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 175/615 (28%), Positives = 295/615 (47%), Gaps = 58/615 (9%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           +LD AS  L  +R    +  E + + ++ +           + +IT+R +R  + +K  +
Sbjct: 161 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 220

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 243
           +    DG+  + S++G T ++EP   V  NN    L  + I EE  +L +   L+A + +
Sbjct: 221 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 276

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
              ++    ++V  I+  + +A  A    GV  ILS+      D ++N+   +HPL+   
Sbjct: 277 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 327

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                        P                    +  VP +I +    R+++ITG NTGG
Sbjct: 328 -------------P-------------------PNVVVPTNILLGTSYRILLITGSNTGG 355

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT S+KTLGL SLM++ GL++PA +   LP F  I ADIGD QS+E +LSTFS H+++++
Sbjct: 356 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 415

Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
            I++      LVL+DE+GSGTDP EG ALA SIL++ R +  L +V+THY +L       
Sbjct: 416 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 475

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
              EN   EF   TL+PTYR+  G  G S+AL+IA  +G  + I+ RA +     + +  
Sbjct: 476 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVTRAAE----YKSQFG 531

Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
            H   E+   L E+ RK   + R       E   +  ++E E K  + +   + AK    
Sbjct: 532 SHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEKKQFNEKRKQILAKAQAD 591

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
            +      +V+ + +++  ++QL + + D+  S I  +   I+ +   H PD        
Sbjct: 592 AEAMKRSLRVEGEAIIKQLKSQLSETNKDKRQSAINAARKGISNV---HVPDAPVDDDRK 648

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 721
             ++   + G+ V V +L   L TV+ + G+   V +      V+V   ++  R   N  
Sbjct: 649 TLTAEEVKVGQVVFVTTL-RSLGTVLSMKGNRVNVDINGLTATVKVNELQSTTREEGNKL 707

Query: 722 RKNAANPAPRLRKQV 736
            +      P+ RK++
Sbjct: 708 EREQKAAMPKTRKRM 722


>gi|306820562|ref|ZP_07454193.1| DNA mismatch repair protein MutS [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551379|gb|EFM39339.1| DNA mismatch repair protein MutS [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 785

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 206/721 (28%), Positives = 337/721 (46%), Gaps = 114/721 (15%)

Query: 23  LLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           LL QTS A  M+ ++  +   +I D+      A  G +L    +  V+ TLR        
Sbjct: 46  LLEQTSEAQKMIVTKGAIPFGSIYDVRLQAKKASIGSILDAKSLIKVKETLRT------- 98

Query: 82  LTEAAELDGDSLQRYS--PLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
               A +    ++++   P++  +  N      +E++I   I  +  I  D AS +L  I
Sbjct: 99  ----ARISKSYVEQFEDIPVISSISDNIRVSKSIEDEIERAIISETEI-SDDASTELRRI 153

Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
           R +     +++ + L ++      A  +   ++T R  R  + +K+ ++   P GI  + 
Sbjct: 154 RRQMANEKQSIKNKLNEIVTSAKYAKILQDTVVTVRNDRFVLPVKSENRDQFP-GIVHDT 212

Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
           SSSGAT F+EP   V  NN    L   E  E   IL  LT+ + +   EI Y  + + E+
Sbjct: 213 SSSGATLFIEPMAIVNMNNHLSALKQEEYREVERILEFLTSMVGEFSNEIIYDCEMLEEL 272

Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
           D   A+   +  MD + P ++   +V F ++      +HPL+                  
Sbjct: 273 DFIMAKGKLSVSMDAIEPKINQDKYVRFVNA------RHPLIE----------------- 309

Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
           K  V +S + +G                       +VITGPNTGGKT ++KTLGL  +M 
Sbjct: 310 KDKVVSSTIEIGK------------------SYTTLVITGPNTGGKTVTLKTLGLLCIML 351

Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
           + GL++P         F+ I ADIGD QS+ Q+LSTFS H++ IV I+  V   SLVL D
Sbjct: 352 QCGLHIPCDIGSSGYIFNNIFADIGDEQSIAQSLSTFSAHMTNIVGIMNEVDENSLVLFD 411

Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
           E+G+GTDP EG  LA SIL  L+++  L   TTHY++L        +  NA+ EF + TL
Sbjct: 412 ELGAGTDPVEGAGLAISILDTLKEKDILTAATTHYSELKNYALTVDKVTNASVEFDVNTL 471

Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE-------RQQHRKSE 549
            PTYR++ G  G SNA  I++ +G    IIQRA+  +  E ++ E       + ++   E
Sbjct: 472 SPTYRLIIGIPGKSNAFEISQKLGLSTGIIQRARDSIHTESIKVEDVITKLDKIKNEYEE 531

Query: 550 LYQSLMEE-------RRKLESQARTAASLHAEIMD--------LYREIEDEAKDLDRRAA 594
             Q L +E       R KLE++ R A     +I++        L  E ++EA ++++   
Sbjct: 532 KKQRLEKELEDAEFIRLKLENRERRAQQNSEKILEEAKNKARSLVEEAKNEADEINKVLN 591

Query: 595 HL-KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
            L K+ + + + +++N  K +I+T         +D  A +   L+K +E          +
Sbjct: 592 KLKKSSDYKNIDKKMNEIKGRINT--------YKDKYAKKKEELVKSNE----------K 633

Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
           P ++  V +T    +   F +   V S+ DK           + V+VQ G +++ +KK N
Sbjct: 634 PIENVGVGDT---VYVNSFAQNAKVLSVDDK----------KNEVVVQLGAIKMTLKKEN 680

Query: 714 I 714
           I
Sbjct: 681 I 681


>gi|423611718|ref|ZP_17587579.1| MutS2 family protein [Bacillus cereus VD107]
 gi|401247314|gb|EJR53654.1| MutS2 family protein [Bacillus cereus VD107]
          Length = 633

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 169/571 (29%), Positives = 286/571 (50%), Gaps = 72/571 (12%)

Query: 24  LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTEL---EEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TEL   EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTELKSIEEEINFSIKGNS--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +          I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNNSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++  +IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVLENIYQIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   H      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGH------IHLVNCKHPLLTGKV----------- 312

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ ++  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ L +  +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRLSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + + +THY ++    +  + F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHSDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER---QQHRKSEL 550
           ETL P Y+++ G +G+SNAL IA  +     ++QRA++ +  +  R ER    + RK + 
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEYVLQRAKEYMGNKEYRLERVNESKIRKPKF 527

Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYRE 581
            Q   EE  + +   R     H +   +Y+E
Sbjct: 528 VQEKREEHYEYKKGDRVKLLDHNDFGIVYKE 558


>gi|116490536|ref|YP_810080.1| MutS family ATPase [Oenococcus oeni PSU-1]
 gi|116091261|gb|ABJ56415.1| MutS family ATPase [Oenococcus oeni PSU-1]
          Length = 795

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 200/727 (27%), Positives = 362/727 (49%), Gaps = 84/727 (11%)

Query: 23  LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           LL+QTS AL + + +  L +    D+  I        +L  SE+  ++ +L++   +   
Sbjct: 46  LLDQTSDALLIDRRRGGLPIRKTNDLTEIFKRLKLKAVLGTSELADLKSSLQSGQEISDF 105

Query: 82  L-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
           + T   E+  ++L++   +L ++      + L +++   +D +   +LD ASE+L  IR 
Sbjct: 106 IATIKDEIWSENLRQ---ILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHIRK 161

Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
                  N+ +LL K+      A  + +P+I+ R   + + +K+ ++     G+  + S 
Sbjct: 162 NISTTQNNVRTLLVKMTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQSQ 219

Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
           SG T ++EP+  V+ NN    L  ++I E  +IL  ++ ++     ++K   D + E+DL
Sbjct: 220 SGLTLYIEPQATVDLNNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGELDL 279

Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
             A+A  A  M+ + P      H++ +  I+++  +HPLL   S                
Sbjct: 280 IQAKAKLANSMNAIKP------HLNDEKVIDLKNARHPLLASDS---------------- 317

Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
                               V  DI++  +   ++ITGPNTGGKT  +KTLGL  LM++ 
Sbjct: 318 --------------------VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMAQT 357

Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
           G+++ A +   +  F+ I ADIGD QSLEQ+LSTFS H+  I +IL+   R SLVL+DE+
Sbjct: 358 GIFITAGSDSSIYVFNNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLDEL 417

Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
           G+GTDP EG ALA +I++ L  R  L ++TTHY +L    D+     NA+ EF   T  P
Sbjct: 418 GAGTDPGEGAALAMAIVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTFSP 477

Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
           TYR+L G  G SNA+ I++ +GF+  I++ A+  V+   P+ Q+   + L + L+ +RR 
Sbjct: 478 TYRLLLGVPGQSNAIAISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQRRD 532

Query: 561 L---ESQARTAAS--------LHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQVQQ 606
           L   E++ R   S        L+ ++ +  +    E  D   +A H+ +   +E++Q+  
Sbjct: 533 LSKEENELRNQLSRAEQERKQLNQQLNEFEQNKAKEIMDAKNKANHIVSSVRQESKQLLD 592

Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
           ++   +++  +     E QL+   AD+I+ L +++      +++  +    F V      
Sbjct: 593 QIRRERLKAGSSTGKNEQQLKKI-ADQIDDLHQDTSLEKNRVLKRAKSAKQFRV------ 645

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
                 GE+V V S      T+++   + +   VQ G +++ V +N++  +   + K   
Sbjct: 646 ------GEEVMVSSYHQS-GTIIDKISNHEWQ-VQLGILKMNVDENDLEKLSTDQEKKIN 697

Query: 727 NPAPRLR 733
            P  R++
Sbjct: 698 EPIHRVK 704


>gi|83815784|ref|YP_444790.1| MutS2 family protein [Salinibacter ruber DSM 13855]
 gi|83757178|gb|ABC45291.1| MutS2 family protein [Salinibacter ruber DSM 13855]
          Length = 819

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 172/500 (34%), Positives = 242/500 (48%), Gaps = 35/500 (7%)

Query: 41  LSTIEDIAGILNSAV-SGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPL 99
           LS + D+   L  A      + P ++ A RRTL  +  + KK  EA   D      Y  L
Sbjct: 68  LSPMYDLRDALRRAAPEDAYVDPEDLMATRRTLVTLRRL-KKHFEARRED------YPRL 120

Query: 100 LELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQ 159
            + +     L +LEE I   +D +   I D AS +L  +R + +   E L + L K    
Sbjct: 121 ADAVARATPLPDLEETIASILD-EDASIRDDASPELRRLRQQIRSKEEELRTTLDKALRH 179

Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
             + G       T R  RM + ++AS K  + +G   + S+SG T ++EP   +E NN  
Sbjct: 180 AVREGHATGEQATLRGGRMVIPVRASAKGKV-EGFVHDRSASGQTVYIEPAACLELNNEV 238

Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
             L ++E AE   IL  +T  +      I+  +  + + DL  A+A FA  +  V P L+
Sbjct: 239 RELQSAEQAEIERILRRVTDHVRAESDAIEENLTVLAQFDLLRAKARFANRLGAVVPKLN 298

Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
            + HV        EG    L L    R    A                T G  S      
Sbjct: 299 DEGHVEI-----YEGRNPVLQLHFERRDAGDA----------------TDGRASGEEEAL 337

Query: 340 P----VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
           P    VP+D+++  + R +VITGPN GGKT +MKT+GL SLM   GL LP   H   P F
Sbjct: 338 PPREVVPLDLELGADFRTLVITGPNAGGKTVTMKTVGLFSLMLAYGLPLPVAPHSSFPLF 397

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
           D I+ADIGD QS+E +LSTFS H+S +  +L  V   +LVLIDE G+GTDP EG ALA +
Sbjct: 398 DQIVADIGDEQSIEDDLSTFSSHVSNLRHMLSAVGENALVLIDEAGTGTDPDEGAALAQA 457

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           +L+ L +     + TTH+  L     +    EN + EF  ETLRPT+R   G  G S A 
Sbjct: 458 VLEQLTEAGARTIATTHHGTLKTYAHEAEAVENGSMEFDQETLRPTHRYQEGVPGSSYAF 517

Query: 516 NIAKSIGFDRKIIQRAQKLV 535
            IA+ +G    ++ RA+ L 
Sbjct: 518 EIARRMGLSGDLLDRARTLA 537


>gi|294506640|ref|YP_003570698.1| DNA mismatch repair protein MutS2 [Salinibacter ruber M8]
 gi|294342968|emb|CBH23746.1| DNA mismatch repair protein MutS2 [Salinibacter ruber M8]
          Length = 819

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 168/496 (33%), Positives = 246/496 (49%), Gaps = 27/496 (5%)

Query: 41  LSTIEDIAGILNSAV-SGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPL 99
           LS + D+   L  A      + P ++ A RRTL  +  + KK  EA   D      Y  L
Sbjct: 68  LSPMYDLRDALRRAAPEDAYVDPEDLMATRRTLVTLRRL-KKHFEARRED------YPRL 120

Query: 100 LELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQ 159
            + +     L +LEE I   +D     I D AS +L  +R + +   E L + L K    
Sbjct: 121 ADAVARATPLPDLEETIASILDENA-SIRDDASPELRRLRQQIRSKEEELRTTLDKALRH 179

Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
             + G       T R  RM + ++AS K  + +G   + S+SG T ++EP   +E NN  
Sbjct: 180 AVREGHATGEQATLRGGRMVIPVRASAKGKV-EGFVHDRSASGQTVYIEPAACLELNNEV 238

Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
             L ++E AE   IL  +T  +      I+  +  + + DL  A+A FA  +  V P L+
Sbjct: 239 RELQSAEQAEIERILRRVTDHVRAESDAIEENLTVLAQFDLLRAKARFANRLGAVVPKLN 298

Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
            + HV        EG ++P+L    L      +  +   ++  E   +    +       
Sbjct: 299 DEGHVEI-----YEG-RNPVL---QLHFEELGAGGATDRRASGEEEALPPREV------- 342

Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
            VP+D+++  + R +VITGPN GGKT +MKT+GL SLM   GL LP   H   P FD I+
Sbjct: 343 -VPLDLELGADFRTLVITGPNAGGKTVTMKTVGLFSLMLAYGLPLPVAPHSSFPLFDQIV 401

Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
           ADIGD QS+E +LSTFS H+S +  +L  V   +LVLIDE G+GTDP EG ALA ++L+ 
Sbjct: 402 ADIGDEQSIEDDLSTFSSHVSNLRHMLSAVGESALVLIDEAGTGTDPDEGAALAQAVLER 461

Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
           L +     + TTH+  L     +    EN + EF  ETLRPT+R   G  G S A  IA+
Sbjct: 462 LTEAGARTIATTHHGTLKTYAHEAEAVENGSMEFDQETLRPTHRYQEGVPGSSYAFEIAR 521

Query: 520 SIGFDRKIIQRAQKLV 535
            +G    ++ RA+ L 
Sbjct: 522 RMGLSGDLLDRARTLA 537


>gi|229135384|ref|ZP_04264173.1| hypothetical protein bcere0014_42800 [Bacillus cereus BDRD-ST196]
 gi|228648080|gb|EEL04126.1| hypothetical protein bcere0014_42800 [Bacillus cereus BDRD-ST196]
          Length = 786

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 211/700 (30%), Positives = 344/700 (49%), Gaps = 91/700 (13%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  LQ    +L
Sbjct: 65  LGGISDIRANIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVELQ----IL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
           NN   E R+   +  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +  
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291

Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
             PI++++ ++    +      +HPL+               +P                
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314

Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
               +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   + 
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370

Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
            F  I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430

Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
            SIL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490

Query: 514 ALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
           A  I+K +G   ++I RA+  +  +  + E    +  E  ++   ER++ E   + +  L
Sbjct: 491 AFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKL 550

Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
           H E+     E  DE     R    LKA+  ++ ++++  AK + + ++Q+   QLR A  
Sbjct: 551 HRELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKQEAEGIIQEL-RQLRKAQL 602

Query: 632 DEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLG 682
             +  + LI+     E A   +V+  +          N  +  P+     G++V V + G
Sbjct: 603 INVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFG 653

Query: 683 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            K   + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 654 QKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|229087099|ref|ZP_04219249.1| hypothetical protein bcere0022_36710 [Bacillus cereus Rock3-44]
 gi|228696167|gb|EEL49002.1| hypothetical protein bcere0022_36710 [Bacillus cereus Rock3-44]
          Length = 786

 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 214/710 (30%), Positives = 343/710 (48%), Gaps = 85/710 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + K+  E    +G  L    P+L
Sbjct: 65  LGGIFDIRPNVKRAKIGSMLSPHELLDIASTMYGSRQM-KRFIEDMVDNGVEL----PIL 119

Query: 101 E-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     + LD AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETYVAQIVSLYDLEKKITSCIGDGGEV-LDSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL +LT E+A     +   ++ +  +D  FA+A +A+ +    
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLANVEVIANLDFIFAKALYAKRIKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++++ ++    +      +HPL+               +P                  
Sbjct: 294 PIVNNERYMDLRQA------RHPLI---------------DP------------------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
                VP DI +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   +  F
Sbjct: 315 --KIIVPNDIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVLDESEICVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+EQ+LSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SNA 
Sbjct: 433 ILDEVYNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
            I+K +G   ++I RA+  +  +  + E    +  E  ++   E  + E   + +  LH 
Sbjct: 493 EISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAEREWNEAEEHRKQSEKLHR 552

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS-AD 632
           E+     E  DE     R    LKA+  ++ ++++  AK + + ++ +   QLR A  A+
Sbjct: 553 ELQRQIIEFNDE-----RDERLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQLAN 604

Query: 633 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVV 689
             +  + E++S +    E   P+          ++   Q    G++V V + G K   + 
Sbjct: 605 VKDHELIEAKSRL----EGAAPELVKKQKVKVKNTAPKQQLRAGDEVKVLTFGQKGQLLK 660

Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTC 739
           +V   D+   VQ G ++++VK++++  I NS       P P  +K V T 
Sbjct: 661 KV--SDNEWNVQIGILKMKVKESDMEYI-NS-------PQPVEKKAVATV 700


>gi|261366884|ref|ZP_05979767.1| DNA mismatch repair protein MutS [Subdoligranulum variabile DSM
           15176]
 gi|282570998|gb|EFB76533.1| MutS2 family protein [Subdoligranulum variabile DSM 15176]
          Length = 790

 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 215/732 (29%), Positives = 346/732 (47%), Gaps = 123/732 (16%)

Query: 18  EESQKLLNQTSA--ALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           E+ +  L+QT+A  +L +    P     + ++  I   A  G +LS  E+  +  TLR  
Sbjct: 41  EDERFALSQTNAVNSLLIKNGSP-RFGRVSEVRRITAHAQKGGILSMGELLEIAATLRNF 99

Query: 76  NNV--WKKLTEAAELDGDSLQRYS----PLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
             +  W  L+E   L  D L  Y+    P+LE   + + L+  E             + D
Sbjct: 100 AGLSQWYGLSEHEMLPTDDL-FYALAPQPVLEKQISESILSPEE-------------MAD 145

Query: 130 RASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
            AS  L  +R + ++  ++    LD+++K      F    +   +++ R  R  V ++A 
Sbjct: 146 TASVTLHDLRRKIRQTEDSIRTKLDNIIKNSTTNKF----LQDAVVSLRNGRYVVPVRAE 201

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           ++  +  G+  +VSS+GAT F+EP   VE N   ++L   E  E T ILS  +A++   E
Sbjct: 202 YRGEV-GGVIHDVSSTGATIFVEPTAVVEANARIMQLRAQEQEEITRILSAFSAQVGSLE 260

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
            +  Y  + +L+IDL  A+A  A   +   P +S   +   + +      +HPL+    +
Sbjct: 261 PQFSYSYEAMLQIDLLLAKARLAVEQNAFMPTVSDTVYFRLNRA------RHPLIDKKQV 314

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                                              VP+DI +  E   +VITGPNTGGKT
Sbjct: 315 -----------------------------------VPVDIALGEEYDTLVITGPNTGGKT 339

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            S+KT GL + M++ G  +PA     +  F   L DIGD QS+EQ+LSTFSGH+ RI  I
Sbjct: 340 VSIKTAGLLNAMAQHGFLIPAHESSVVCNFREYLVDIGDEQSIEQSLSTFSGHMKRISGI 399

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           L+L    +L LIDE+G+GTDP+EG ALA SIL+ LR +  L + TTHYA+L     +   
Sbjct: 400 LQLAGHGTLTLIDELGAGTDPAEGAALAVSILEQLRRQGSLLMATTHYAELKVYALETPG 459

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
             NA+ EF++ETL PTY++  G  G SNA  I+  +G  ++II  A              
Sbjct: 460 VVNASCEFNVETLMPTYKLSVGVPGKSNAFLISAKLGIPQEIIDAA-------------- 505

Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI---EDEAKDLDRRAAH-LKAKE- 600
                       R  + +  +   S+ A++ DL  ++   +DEA+     A H L++ E 
Sbjct: 506 ------------RNHMSNDDKRLDSVLAQLDDLKLQLKGAQDEAEKARYEAEHALESAEK 553

Query: 601 -----TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV----EA 651
                 +Q ++EL  A+ Q   ++Q  +N+  + + DE+  + K+ +++ A       E 
Sbjct: 554 KREELIEQGKRELEDARRQAHELMQQVQNEAYNLT-DELRRIQKDEKTSAAQRAVRAREI 612

Query: 652 HRPDDDFSVSETNT----SSFTP----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
            R D +  +  T+       F P    Q G++V +  L ++LATV   P  D  V V+ G
Sbjct: 613 ARKDTETLLKRTDAKPVPKKFVPLKEVQIGQEVVIAEL-NQLATVTARPDRDGMVEVRAG 671

Query: 704 KMRVRVKKNNIR 715
            M+ +V    +R
Sbjct: 672 IMKTKVPLTGLR 683


>gi|431738747|ref|ZP_19527689.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1972]
 gi|430596860|gb|ELB34672.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1972]
          Length = 642

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 161/511 (31%), Positives = 254/511 (49%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S L K          I + +I ++     + IKAS+K  + DG  ++ S+ G T 
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTV 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            F++ ++G+ P ++   H+           +HP L                         
Sbjct: 280 KFSREINGITPKINKSEHIVIKQG------RHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  VP+D+++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|431740930|ref|ZP_19529839.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E2039]
 gi|430602565|gb|ELB40129.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E2039]
          Length = 642

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 162/511 (31%), Positives = 256/511 (50%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S L K          I + +I ++     + IKAS+K  + DG  ++ S+ G T 
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTV 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            F++ ++G+ P ++   H+       I+  +HP L                         
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  VP+D+++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKKGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|293572245|ref|ZP_06683244.1| MutS2 family protein [Enterococcus faecium E980]
 gi|291607704|gb|EFF37027.1| MutS2 family protein [Enterococcus faecium E980]
          Length = 642

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 161/511 (31%), Positives = 254/511 (49%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S L K          I + +I ++     + IKAS+K  + DG  ++ S+ G T 
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTV 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            F++ ++G+ P ++   H+           +HP L                         
Sbjct: 280 KFSREINGITPKINKSEHIVIKQG------RHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  VP+D+++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|315652943|ref|ZP_07905909.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum DSM
           3986]
 gi|315484801|gb|EFU75217.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum DSM
           3986]
          Length = 785

 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 210/716 (29%), Positives = 337/716 (47%), Gaps = 76/716 (10%)

Query: 19  ESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
           E Q+  + T+AAL  ++ +  L LS ++DI   L     G  LS +E+  +   L  +N 
Sbjct: 42  EIQRNQSHTTAALDRIRLKGNLSLSEVKDIKDSLKRLEIGSSLSQAELMKI---LSILNA 98

Query: 78  VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
             K ++     D      Y  L E  +  +    L++++  CI  +  I+ D AS +L  
Sbjct: 99  SAKAISYGLHSDD---PEYDVLEEYFRGLDECGPLKKELSRCIISEE-IMADNASPELSH 154

Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAG--GIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
           IR    R +  ++S +      I  A    +   +IT+R    C+ IK+ +K  +  G+ 
Sbjct: 155 IR----RKINQINSKMYTELNNILNAHREYLMDSVITQRDGAYCLPIKSEYKNKVA-GVV 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
            + SS+G+T F+EP   +  NN    LS  E  E   IL  L+   A     ++     +
Sbjct: 210 HDRSSTGSTVFIEPLAIIRMNNELKSLSMDEKKEIEKILESLSLFAADYINILENNSKNL 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
           + +D  +A+A  ++ M+G  P  +S+ +      INI+  +HPLL    +          
Sbjct: 270 IFLDFVYAKANLSKKMNGSEPKFNSKHY------INIKEGRHPLLDTKKV---------- 313

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VPI+I +     +++ITGPNTGGKT S+KT+GL +
Sbjct: 314 -------------------------VPINISLGDTYDLLIITGPNTGGKTVSLKTVGLFT 348

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           +M ++GL++PA     L  FD + ADIGD QS+EQ+LSTFSGH+  IV IL      SL 
Sbjct: 349 IMGQSGLHIPAFEGSELSVFDDVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADAGSLC 408

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DE+ +GTDP+EG ALA SIL +L       + TTHY++L      +   ENA+ EF +
Sbjct: 409 LFDELCAGTDPTEGAALAISILSFLHRMKSRCIATTHYSELKVFALNEPGVENASCEFDV 468

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
            TL PTYRIL G  G SNA  IA  +G    II  A   +E+   + +     +L   L 
Sbjct: 469 ATLSPTYRILIGVPGKSNAFAIAGKLGLPDYIISEAGTHLEKDAKDFE-----DLLAKLE 523

Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
            +R+ +E    +      EI  L R  + + ++L  +   +  +  +  ++ L  AKV  
Sbjct: 524 NDRQIIEKDKLSIQKYKREIESLKRHYDKQEENLAAKKEKILEEAKESARKILEEAKVTA 583

Query: 616 DTVVQDFENQLRDASA-----DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
           D  +++  N++   +      +E  + ++ES +     VE  +P      +         
Sbjct: 584 DDTIKNI-NKIASGAGLGFALEEQRTRLRESINKNTKSVEVKKP------TNKLKKPKEL 636

Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI--PNSKRKN 724
           + G+ VHV SL      V  +P     + VQ G +R +V  ++I  I  P+ K +N
Sbjct: 637 KLGDSVHVISLNLD-GIVSSLPNQSGNLFVQMGILRSQVNISDIAQIEEPDKKPEN 691


>gi|346307521|ref|ZP_08849654.1| hypothetical protein HMPREF9457_01363 [Dorea formicigenerans
           4_6_53AFAA]
 gi|345905454|gb|EGX75193.1| hypothetical protein HMPREF9457_01363 [Dorea formicigenerans
           4_6_53AFAA]
          Length = 792

 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 178/568 (31%), Positives = 278/568 (48%), Gaps = 66/568 (11%)

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           P+IT R  R C+ +KA ++  +P G+  + SS+G+T F+EP   V+ NN    L   E  
Sbjct: 187 PIITMRGDRYCIPVKAEYRGQVP-GMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQE 245

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ L+A+ A+   EI+     + E+D  FAR   A  M+   P+ + +  +    
Sbjct: 246 EIQVILARLSADAAEYVSEIRTDYATLTELDFIFARGALALDMNASKPMFNQERRIRIRE 305

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
                  +HPLL    +                                   VPI + + 
Sbjct: 306 G------RHPLLDKKKV-----------------------------------VPISLTLG 324

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
            +  ++++TGPNTGGKT S+KT+GL  LM +AGL++PA +   L  F  + ADIGD QS+
Sbjct: 325 GDFDLLIVTGPNTGGKTVSLKTVGLFQLMGQAGLHIPALDRSELGVFREVYADIGDEQSI 384

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQNLSTFS H++ +V  ++ V  +SLVL DE+G+GTDP+EG ALAT+IL +L  +    +
Sbjct: 385 EQNLSTFSSHMTNVVSFIKQVDEDSLVLFDELGAGTDPTEGAALATAILNHLHCQGIRTM 444

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L          ENA+ EF +ETLRPTYR+L G  G SNA  IA  +G    II
Sbjct: 445 ATTHYSELKVYALSTPGVENASCEFDVETLRPTYRLLLGIPGKSNAFAIAGKLGLPDYII 504

Query: 529 QRAQ-KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
           + A+  L E      Q     +L   L   RR +  +    A+   E+  L +E   + +
Sbjct: 505 EEAKTHLTE------QDESFEDLLTDLESSRRTIAKEQEEIAAYRRELEALKQETAQKKE 558

Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINS----LIKESE 642
            L+ +   +  +  ++    L  AK   D  +++F    + + SA E+      L K+ E
Sbjct: 559 KLEEQRDRILREANEKAHAILADAKETADETMRNFHKFGKANVSATEMEKERERLRKKME 618

Query: 643 SAIAAIV-EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
                +  E  +P   +  S+        + GE V V S+ +   TV  +P     ++VQ
Sbjct: 619 KTREGMTEEVKKPKKQYKPSDF-------KLGETVKVLSM-NLTGTVHSLPDTKGNLMVQ 670

Query: 702 YGKMRVRVKKNNIRPI---PNSKRKNAA 726
            G +  +V  +++  +   P   +K AA
Sbjct: 671 MGILSSKVHISDLEIVDEKPAYLKKTAA 698


>gi|257900064|ref|ZP_05679717.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
 gi|257837976|gb|EEV63050.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
          Length = 642

 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 161/511 (31%), Positives = 254/511 (49%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S L K          I + +I ++     + IKAS+K  + DG  ++ S+ G T 
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTV 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            F++ ++G+ P ++   H+           +HP L                         
Sbjct: 280 KFSREINGITPKINKSEHIVIKQG------RHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  VP+D+++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|164687641|ref|ZP_02211669.1| hypothetical protein CLOBAR_01283 [Clostridium bartlettii DSM
           16795]
 gi|164603415|gb|EDQ96880.1| MutS2 family protein [Clostridium bartlettii DSM 16795]
          Length = 792

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 204/712 (28%), Positives = 344/712 (48%), Gaps = 62/712 (8%)

Query: 17  LEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
            +E +  L +TS A A++  + L  +  I DI      A  G  L P  +  +   LR  
Sbjct: 40  FDEVKNTLLETSEAQAILIKRGLVSMDGIHDIEDKAKRAHVGATLDPGALLKIADCLRVA 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNF-LTELEEKIGFCIDCKLLIILDRASED 134
            ++ + L  + E D +      P+++ L N  +   ++E++I   I  +  I  D AS  
Sbjct: 100 RSLKRNLEGSEEEDFNY-----PIIQALTNALYTFRDIEDRIYTSIVGESEI-SDNASTT 153

Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
           L+ IR    +  +++ S L  + +       +   +I+ R  R  + +KA ++ ++  GI
Sbjct: 154 LKTIRRRIVQKNQSIRSKLNSIISSTTYQKYLQDNIISMRGDRFVIPVKAEYRSVVS-GI 212

Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
             + SSSGAT F+EP   VE NN   +L   E  E   ILS L+A I +   E+    + 
Sbjct: 213 VHDQSSSGATLFIEPMSIVEMNNELRKLKLDEQEEIERILSELSAMIGEISGELISNQEI 272

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
           + ++D AFA+   +  M  + P+L+ + +       +I+  +HP++              
Sbjct: 273 LGKLDFAFAKGKLSVEMRAIEPVLNEEKY------FHIKNGRHPMID------------- 313

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
               K DV                  VP  + +  +   +VITGPNTGGKT ++KT+GL 
Sbjct: 314 ----KRDV------------------VPNTVYLGKDFDTLVITGPNTGGKTVTIKTVGLF 351

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
           +LM+++GL++PA     +  +D + ADIGD QS+EQ+LSTFS H++  V IL  V+ +SL
Sbjct: 352 ALMTQSGLHIPADFGTSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNTVSILNEVTSDSL 411

Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
           V+ DE+G+GTDP EG ALA +IL+ +       + TTHY++L          ENAA EF 
Sbjct: 412 VIFDELGAGTDPVEGAALAIAILEDVNMAGAKCIATTHYSELKNYALTKNGVENAAVEFD 471

Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
           ++TL PTYR+L G  G SNA  I+K +G    +I RA++ +     E +     ++ Q++
Sbjct: 472 VDTLSPTYRLLIGVPGKSNAFEISKKLGLSEYVINRAKEFINTDNIELE-----DVLQNV 526

Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
            + R K E     A  L  EI D+  E E   + +  +   + +K   +       AK Q
Sbjct: 527 EKNRLKAEEDRLEAEKLKKEIEDIKAEYEGRLERVMAQREKIISKAKSEAFSITRQAKEQ 586

Query: 615 IDTVVQDFENQLRDASADE----INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
            + ++++      + ++ +    I +L KE   ++  +  + +      VS        P
Sbjct: 587 SENILKELRKLETEMASKQKQQKIEALRKELSDSMGNLQPSVKSMIVPKVSSKEIKDLKP 646

Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
             G+ V V +L ++  TVV V       LVQ G M++ +   +++ I   K+
Sbjct: 647 --GDDVKVVTL-NQDGTVVSVDKKKKEALVQIGIMKMTLPFKSLQQIQKDKK 695


>gi|303271595|ref|XP_003055159.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463133|gb|EEH60411.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 839

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 239/804 (29%), Positives = 353/804 (43%), Gaps = 138/804 (17%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIE---DIAGILNSAVSGQLLSPSEICA 67
           +P G S   S + L++T+A +A   +  L  S  E   D+   +  A SG+ LS + +  
Sbjct: 60  LPLGASPAISARWLSETTACVAACDAGALPTSAFEGTKDVRAFIRGAASGKTLSGASLAD 119

Query: 68  VRRTLRAVNNVW---KKLTEAAELDGDSLQRYSPLLELLKN-CNFLTELEEKIGFCIDCK 123
           +  T+ A   VW   + L         +   ++PL+ L     +   ++E +I  C+   
Sbjct: 120 IASTMTAAARVWASVESLVATTSDADAAAAAFAPLVSLASPLASTPRDVETEIRRCVAVP 179

Query: 124 LLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
              +LD AS+ L  IR  R+     L  LL++ A  + +    ++  I  R +R C+ IK
Sbjct: 180 GGNVLDDASDALRAIRDARRDAERELRELLRETADYMARKNFAERAQIVTRLNRECIPIK 239

Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI-- 241
           A  +  + +G+ L  S SG T F EP GAV  NN    L+  E AE   +L  LTA +  
Sbjct: 240 AGAQSEM-EGVILGASGSGQTVFKEPAGAVPLNNAIAELNAKEDAEIERVLRTLTALVLG 298

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI----------LSSQSHVSFDSSIN 291
           A     +   ++ +  +D   A+A  A W+D   P+                      + 
Sbjct: 299 ADDGEGLTEAVEALGAVDATRAKAKHAAWLD-ASPVKVVGGTDGDGDDDDDGGGGGGCVR 357

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL------------------- 332
           + G +HPLLL  +L  L        P    +  SE T G                     
Sbjct: 358 LPGARHPLLLQRTLPKL--------PRGGTIGASESTEGWDGEGEGDDDDDEGEGEDDDG 409

Query: 333 ------SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP- 385
                 S   +   VPID  V   T +V ITGPNTGGKTAS+K LGL  LM++AGL+LP 
Sbjct: 410 EEDEKPSTSSASSVVPIDFVVPPRTSLVAITGPNTGGKTASLKLLGLCLLMARAGLHLPV 469

Query: 386 ----AKNHPRLPWFDLILADIGDHQS--LEQNLSTFSGHISRIVDILEL------VSRES 433
               A    R+PW   +LAD+GD QS  LE  LSTFS H+ R+  IL          R +
Sbjct: 470 ARGAAGADARVPWTKTVLADLGDAQSLDLEGGLSTFSAHLRRLQRILRASRDDTDAKRYT 529

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE------ 487
           +VL+DE G GTDP+EG ALA+++L+   D   L V T+HY ++  L   D          
Sbjct: 530 VVLLDEPGGGTDPAEGAALASAVLRASADACRLVVATSHYDEVKALAGGDGGDGGMVGAA 589

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NAA EF   TLRPTYR+LWG++G+SNAL IA+ +G D  +  RA+K   R R +R+    
Sbjct: 590 NAAVEFDAATLRPTYRLLWGASGESNALAIARGLGLDAGVADRAEK---RWRRQRRAAGL 646

Query: 548 -------------------SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
                              SEL  +L  ER   E +A +AA+       L+ ++      
Sbjct: 647 RGDDDDGAGAATVTAVDDVSELASALERERASQEERAASAAAALTRAEALHDDV------ 700

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
             R A HL+ +E           ++ ++T  +     +RDA   E    + E+   + A 
Sbjct: 701 FLRGAKHLRLRE-----------EICVETAERRGVEAMRDA---ETTLALAETREELEAF 746

Query: 649 VEAHRP-------DDDFSVSETN----------------TSSFTPQFGEQVHVKSLGDKL 685
                P         +    E N                   +TP+ G  V V+ LG   
Sbjct: 747 ASEALPRGWTFDARGEAVPGEKNRDGGGDGDGDAGDGADGRGWTPKVGSVVIVRRLGGAE 806

Query: 686 ATVVEVPGDDDTVLVQYGKMRVRV 709
           A V++V      VLV++G +  RV
Sbjct: 807 AEVLDVDEGAREVLVKFGSITTRV 830


>gi|431081425|ref|ZP_19495515.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1604]
 gi|430565357|gb|ELB04503.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1604]
          Length = 642

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 162/511 (31%), Positives = 256/511 (50%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S L K          I + +I ++     + IKAS+K  + DG  ++ S+ G T 
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTV 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            F++ ++G+ P ++   H+       I+  +HP L                         
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  VP+D+++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKKGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|291562931|emb|CBL41747.1| MutS2 family protein [butyrate-producing bacterium SS3/4]
          Length = 798

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 210/686 (30%), Positives = 323/686 (47%), Gaps = 83/686 (12%)

Query: 35  QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL----RAVNNVWKKLTEAAELDG 90
           Q   L L+ + D+   L     G  LS +E+ +V   L    RA N  + +  E  EL  
Sbjct: 59  QKGSLSLAGVRDVRDSLKRLEIGSSLSITELLSVSGLLTCAARAKN--YGRHPENMELPD 116

Query: 91  DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME--- 147
           DSL      LE L N N       +I  CI  +  I  D AS  L  +R + K   +   
Sbjct: 117 DSLDEMFRTLEPLTNVN------SEITRCILGEDEIA-DDASPGLHHVRRQMKITADKVH 169

Query: 148 -NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYF 206
             L+S+L      +  A      +IT R  R C+ ++A +K     G+  + S++G+T F
Sbjct: 170 TQLNSILNSSRTMLQDA------VITMRDGRYCLPVRAEYKSQFA-GMVHDQSATGSTLF 222

Query: 207 MEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAG 266
           +EP   ++ NN    L   E  E   IL+ L+ E+      I    + + ++D  FA+A 
Sbjct: 223 IEPMAIIKLNNELRELELKEQKEIEMILAALSTELVPYIEPITTDFEILTKLDFIFAKAA 282

Query: 267 FAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSE 326
            ++  +   P  + + +      I+I+  +HPLL               +P K       
Sbjct: 283 LSRIYNCSMPKFNRKGY------IHIKDGRHPLL---------------DPKKV------ 315

Query: 327 MTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 386
                         VPI+I +  +  ++++TGPNTGGKT S+KT+GL +LM ++GL +PA
Sbjct: 316 --------------VPINIWMGKDFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGLQIPA 361

Query: 387 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDP 446
            +   L  FD + ADIGD QS+EQ+LSTFS H++ IV IL      SL L DE+ +GTDP
Sbjct: 362 FDGSELSVFDEVFADIGDEQSIEQSLSTFSAHMTNIVKILNQADSRSLCLFDELCAGTDP 421

Query: 447 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
           +EG ALA SIL +L +     + TTHY++L          ENA  EF++ETLRPTY++L 
Sbjct: 422 TEGAALAISILSFLHNMKCRTMATTHYSELKVFALSTPGVENACCEFNVETLRPTYKLLI 481

Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQAR 566
           G  G SNA  I++ +G    II  A+  +     E       +L  +L + R  +E +  
Sbjct: 482 GIPGKSNAFAISRQLGLPDYIIDDAKTHL-----ESNDEAFEDLLANLEQSRVTIEKERE 536

Query: 567 TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 626
             AS   EI  L + IE + + LD R   L     ++ Q+ L  AK   D  +++  N+L
Sbjct: 537 EIASYKEEISRLKKNIEQKEERLDERKEKLLKNANEEAQRILREAKETADQTIRNI-NKL 595

Query: 627 RDASADEINSLIKESESAIAAIVEA-HRPDDDFSVSETN--TSSFTP---QFGEQVHVKS 680
             +S      + KE E+    + E   + D   S+        + +P   + G+ V V +
Sbjct: 596 AASSG-----VGKELEAERTKLREKLDKVDKSLSLKNNKGPKKTISPKKLKIGDGVKVLT 650

Query: 681 LGDKLATVVEVPGDDDTVLVQYGKMR 706
           +  K  TV  +P     + VQ G +R
Sbjct: 651 MNLK-GTVSTLPNAKGDLYVQMGILR 675


>gi|423512651|ref|ZP_17489182.1| MutS2 protein [Bacillus cereus HuA2-1]
 gi|402447575|gb|EJV79425.1| MutS2 protein [Bacillus cereus HuA2-1]
          Length = 786

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 206/697 (29%), Positives = 338/697 (48%), Gaps = 85/697 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  L    P+L
Sbjct: 65  LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +    
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++++ ++    +      +HPL+               +P                  
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   +  F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SNA 
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            I+K +G   ++I RA+  +           K E   + +EE +K   + R  A  H + 
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546

Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
            + L+RE++ +  + +        K  ++ ++++  AK + + ++ +   QLR A    +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVNV 605

Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
             + LI+     E A   +V+  +          N  +  P+     G++V V + G K 
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFGQKG 656

Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
             + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 657 QLLKKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|412992595|emb|CCO18575.1| MutS2 family protein [Bathycoccus prasinos]
          Length = 874

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 225/731 (30%), Positives = 345/731 (47%), Gaps = 87/731 (11%)

Query: 50  ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL--------TEAAELDGDSLQRYSPLLE 101
            L  A  GQ LS      V  TL A+  V  ++         +  + D  +L++ +  L 
Sbjct: 152 FLEGAKKGQTLSAGSFVDVYTTLVAMEKVCDEIYIDDDASGADDDDDDVKALRKATESLR 211

Query: 102 LLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRNMENLDSLLKKVAAQ 159
             ++   +  + ++I  CI+  +    I + ASEDL  IR+      + L   L  +A +
Sbjct: 212 ACRDDEKVHAMRKEIERCINVDISSGAIRNDASEDLAQIRSNLSSTAKTLRKTLNDIANE 271

Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
           + Q    ++  I  R  R C+ +K      L  GI L  S SGAT F EP+  +  NN  
Sbjct: 272 MAQKKFAERAQIVTRLGRECIPMKLGSAGQLK-GIVLATSDSGATVFKEPEEVIALNNFL 330

Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI-----DLAFARAGFAQWMDGV 274
             L   E  E   IL  LT+E+    +E+  ++   LE+     DLA A+A  A+WM G 
Sbjct: 331 SELKELEEMEIEVILKRLTSEL----KEVADVIQEALEVGMTTADLANAKARHAKWMSGS 386

Query: 275 CPI-LSSQSHVSFDSSINIEGIKHPLLLGSSLRSL-------------SAASSNSNPLKS 320
            P+ + S +  S +  ++I   +HPLLL   L  L               A     P   
Sbjct: 387 RPVFMDSSASSSSEKKVSITNAQHPLLLEKYLPKLPNFLGDDDDENDKQKAWEKLAPGSF 446

Query: 321 DVENSEMTVGSLSKGISDFP-----VPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
             EN+E  + S  +G + F      VPI+  ++ E   V ITGPNTGGKTAS+KTLG+  
Sbjct: 447 YDENAEEEIDS-KQGRTRFDCRSKIVPINFHIDAEATAVAITGPNTGGKTASLKTLGILV 505

Query: 376 LMSKAGLYLP----AKNHPR--LPWFDLILADIGDHQSLE---QNLSTFSGHISRIVDIL 426
           LM++AG+YLP    +  H +  LP+   +  D+GD Q+L+     LSTF  HI R+  IL
Sbjct: 506 LMARAGMYLPCGGESSEHGQQILPFVRTVACDLGDSQTLQLGDGGLSTFGAHIRRLKRIL 565

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS----CLKDK 482
           E  + +SLVL+DE GSGTDP EG ALA ++   +  +  L V+T+H+ ++      + D 
Sbjct: 566 ESSTEDSLVLLDEPGSGTDPREGAALAVAVSSAVAKKSKLLVLTSHFEEVKQFALAVDDN 625

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER----- 537
           D +F  AA  F +E  RPTY ++WG T DSNAL+I++ +G D  +++ A +   R     
Sbjct: 626 DNQFRVAAVRFDVENNRPTYELVWGETEDSNALSISRGLGLDGDLLEEATQAHARMMELE 685

Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
           +R  +++ + S+   SL EE    +  A  A SL  E  +         ++ + RA  LK
Sbjct: 686 MRNTKKREQNSD--ASLDEE----DEDANLADSLRLEREEQRLRFTQATENFE-RAQQLK 738

Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA-----IAAIVEAH 652
            K    V +E NF + +++   + FE Q    SA  I       E+A     +  IV+  
Sbjct: 739 TK----VFRETNFLRERVNISKERFEFQ----SAQSIEEAKSRCETAATLEEVEEIVKET 790

Query: 653 RPDDDFSVSE---------TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
            P+  +  +           N S + P+  ++V VK LG   A VV V        V+ G
Sbjct: 791 FPEGFYMNARGEIALEDDGGNASEYVPKPKDKVLVKMLGGAEAEVVSVDLAASECTVRIG 850

Query: 704 KMRVRVKKNNI 714
            +  R   N +
Sbjct: 851 SLVTRSPLNGV 861


>gi|229062235|ref|ZP_04199557.1| hypothetical protein bcere0026_43060 [Bacillus cereus AH603]
 gi|228717063|gb|EEL68742.1| hypothetical protein bcere0026_43060 [Bacillus cereus AH603]
          Length = 786

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 206/697 (29%), Positives = 338/697 (48%), Gaps = 85/697 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  L    P+L
Sbjct: 65  LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +    
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++++ ++    +      +HPL+               +P                  
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   +  F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SNA 
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            I+K +G   ++I RA+  +           K E   + +EE +K   + R  A  H + 
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546

Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
            + L+RE++ +  + +        K  ++ ++++  AK + + ++ +   QLR A    +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVNV 605

Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
             + LI+     E A   +V+  +          N  +  P+     G++V V + G K 
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFGQKG 656

Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
             + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 657 QLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|282882263|ref|ZP_06290897.1| MutS2 protein [Peptoniphilus lacrimalis 315-B]
 gi|281297884|gb|EFA90346.1| MutS2 protein [Peptoniphilus lacrimalis 315-B]
          Length = 788

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 213/722 (29%), Positives = 350/722 (48%), Gaps = 82/722 (11%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
           +I      EE  K L +TS A++++  + +P  L  I  +  +L  A  G +L+PS +  
Sbjct: 34  EIEISTDYEEINKRLKETSEAVSLIVKKGEP-PLFAIISLRDVLRRASLGGILNPSNLID 92

Query: 68  VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
           +   LR V+ + K   +  + D ++ +  S + +L+ N      LE+ I      K +I 
Sbjct: 93  ISNFLR-VSRLLKNYLKKDDKDENT-ENISIIKDLIDNLYINRNLEDSIN-----KKIIS 145

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKAS 185
            D+ ++D        +RN+  L   L++   +I Q+    +   +IT R  R  + ++  
Sbjct: 146 EDQVADDASRKLLSIRRNIVKLQGSLREKLEKILQSQKDYLQDCIITMREGRYVIPVRNE 205

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           +K  +  G+  ++S SG T ++EP   V  NN    L   E  E   IL  L+ E+A+  
Sbjct: 206 NKSKVK-GLVHDISGSGQTVYIEPIEVVNANNEIKTLKIEEKEEVEKILKELSEEVAEVS 264

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
             I+     + EID  FA+   +  M    P       V+ +  I+++   HPLL     
Sbjct: 265 TSIESNELILREIDFIFAKGKLSLDMGANLP------KVNKNRYIDLKNAYHPLL----- 313

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                             N ++ V            PI+I +  +   ++ITGPNTGGKT
Sbjct: 314 ------------------NRKIAV------------PINIYIGKDFTSLIITGPNTGGKT 343

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KTLG+  LM++ GL++PA    ++  F+ + ADIGD QS+EQNLSTFS H++ IV+I
Sbjct: 344 VTLKTLGILQLMAQYGLHIPADEDSQVGIFNNLFADIGDEQSIEQNLSTFSSHMTNIVEI 403

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           LE V  +SLVL DE+G+GTDP+EG ALA SI+ ++ +R    + TTHY  L         
Sbjct: 404 LEKVDEDSLVLFDELGAGTDPTEGAALARSIMDFMLERKIRCISTTHYNQLKIYALTTEG 463

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER-------- 537
            +NA+ EF + TL PTY++L G  G SNA  I+K +G  +KII  A+ L+ +        
Sbjct: 464 VKNASMEFDINTLSPTYKLLIGLPGKSNAFEISKRLGLSQKIINHARDLISQENIEFEKV 523

Query: 538 -LRPERQQHRKSELYQSLMEERRKLESQ-ARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
               E+ + +  E  +     +  LE Q AR    L  +I +   +I  EAKD  RR   
Sbjct: 524 LASIEKDRTKTREFKELAKRHKSDLEKQNARLEIELK-KIENSKEKILKEAKDEARRILL 582

Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPD 655
              +    +  E++  K +I +   D   +++++     NS+ K        I +A +P 
Sbjct: 583 STKENVDLILDEISSLKAEISS---DQARRIQESGDLLRNSIRKVDNDKKFVIEKAKKPI 639

Query: 656 DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           +D  V            G+QV   S G+ ++TV+E+P     + +Q G M+++V K ++ 
Sbjct: 640 EDIKV------------GDQVR-NSFGN-ISTVLELPDSKGNIYIQSGIMKMKVPKESLT 685

Query: 716 PI 717
            I
Sbjct: 686 RI 687


>gi|166030474|ref|ZP_02233303.1| hypothetical protein DORFOR_00135 [Dorea formicigenerans ATCC
           27755]
 gi|166029726|gb|EDR48483.1| MutS2 family protein [Dorea formicigenerans ATCC 27755]
          Length = 792

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 178/568 (31%), Positives = 278/568 (48%), Gaps = 66/568 (11%)

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           P+IT R  R C+ +KA ++  +P G+  + SS+G+T F+EP   V+ NN    L   E  
Sbjct: 187 PIITMRGDRYCIPVKAEYRGQVP-GMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQE 245

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ L+A+ A+   EI+     + E+D  FAR   A  M+   P+ + +  +    
Sbjct: 246 EIQVILARLSADAAEYVSEIRTDYATLTELDFIFARGALALDMNASKPMFNQERRIRIRE 305

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
                  +HPLL    +                                   VPI + + 
Sbjct: 306 G------RHPLLDKKKV-----------------------------------VPISLTLG 324

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
            +  ++++TGPNTGGKT S+KT+GL  LM +AGL++PA +   L  F  + ADIGD QS+
Sbjct: 325 EDFDLLIVTGPNTGGKTVSLKTVGLFQLMGQAGLHIPALDRSELGVFREVYADIGDEQSI 384

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQNLSTFS H++ +V  ++ V  +SLVL DE+G+GTDP+EG ALAT+IL +L  +    +
Sbjct: 385 EQNLSTFSSHMTNVVSFIKQVDEDSLVLFDELGAGTDPTEGAALATAILNHLHCQGIRTM 444

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L          ENA+ EF +ETLRPTYR+L G  G SNA  IA  +G    II
Sbjct: 445 ATTHYSELKVYALSTPGVENASCEFDVETLRPTYRLLLGIPGKSNAFAIAGKLGLPDYII 504

Query: 529 QRAQ-KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
           + A+  L E      Q     +L   L   RR +  +    A+   E+  L +E   + +
Sbjct: 505 EEAKTHLTE------QDESFEDLLTDLESSRRTIAKEQEEIAAYRRELEALKQETAQKKE 558

Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINS----LIKESE 642
            L+ +   +  +  ++    L  AK   D  +++F    + + SA E+      L K+ E
Sbjct: 559 KLEEQRDRILREANEKAHAILADAKETADETMRNFHKFGKANVSATEMEKERERLRKKME 618

Query: 643 SAIAAIV-EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
                +  E  +P   +  S+        + GE V V S+ +   TV  +P     ++VQ
Sbjct: 619 KTREGMTEEVKKPKKQYKPSDF-------KLGETVKVLSM-NLTGTVHSLPDTKGNLMVQ 670

Query: 702 YGKMRVRVKKNNIRPI---PNSKRKNAA 726
            G +  +V  +++  +   P   +K AA
Sbjct: 671 MGILSSKVHISDLEIVDEKPAYLKKTAA 698


>gi|366053748|ref|ZP_09451470.1| MutS2 family protein [Lactobacillus suebicus KCTC 3549]
          Length = 790

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 225/755 (29%), Positives = 367/755 (48%), Gaps = 113/755 (14%)

Query: 18  EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA-- 74
           E   +LL +T+A++ +++ +  + +  + DI+  L        L+ +E+  + R LRA  
Sbjct: 41  ETVNELLGETTASVEILRLNGGMPIPQLSDISEQLKRLKIKATLNGTELAQIARVLRASA 100

Query: 75  -VNNVWKKLTEAAELDGDSLQRY-SPLLELLKNCNFLTELEEKIGFCID---CKLLIILD 129
              + ++KL +  E+D  +++ Y   L+ +      L    E  G   D    KL  + +
Sbjct: 101 STKDFFEKLRQQ-EIDIKAVEHYVDELVTIPSITKQLVSSVEDDGRLKDEASTKLHGLRE 159

Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
           + ++   LIR    + MEN          +  ++  +   ++T R  R  + ++A+++  
Sbjct: 160 KITQTEALIR----QRMENY--------TRGKESKYLSDSIVTMRNDRYVLPVQANYRNH 207

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI---AEETAILSLLTAEIAKSER 246
              G+  + S SG T F+EP+  +E NN   RL  ++I    EE  IL+ L++ +A    
Sbjct: 208 F-GGVVHDQSQSGLTLFIEPQAVMELNN---RLREAQIDERHEERRILAELSSTLAPYRI 263

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           EI +    +  +D   A+A  A  M+   PI+S Q+HV      N++  +HPL+      
Sbjct: 264 EIAHNETILGHLDFLNAKAAIAHEMNATKPIVSEQNHV------NLKRARHPLI------ 311

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                    +P K                     V  DI++    + ++ITGPNTGGKT 
Sbjct: 312 ---------DPKKM--------------------VANDIEIGDAYKAIIITGPNTGGKTI 342

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KT+GL  LM ++GLY+P +    +  F  I ADIGD QSLEQNLSTFSGH+  +  IL
Sbjct: 343 TLKTIGLIQLMGQSGLYIPTEEESSIGVFGDIFADIGDEQSLEQNLSTFSGHMENVKSIL 402

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK-DKDTR 485
           + +   SLVL+DE+G+GTDP EG ALA SIL  +  +    +VTTHY +L     D+D  
Sbjct: 403 DHIDSRSLVLLDELGAGTDPKEGAALAMSILDAIGVKNSYVMVTTHYPELKVYGYDRDQT 462

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
             NA+ EF  ETL+PTYR+L G  G SNA  IA+ +G   +II  A+ L +    + Q  
Sbjct: 463 I-NASMEFDQETLQPTYRLLLGIPGRSNAFEIAQRLGISSEIISEARSLTD---DDSQDL 518

Query: 546 RKSELYQSLMEERRK-------LESQARTAASLHAEI---MDLYREIEDEAKDLDR-RAA 594
            K  +   L+E+R+K       LE Q   A  L  E+   +D +    D+ +D  R +A 
Sbjct: 519 NK--MIGDLVEQRKKAHEHELELEHQVADATDLQTELRQKLDQFEANRDQMQDQARVQAN 576

Query: 595 HLKAKETQQVQQEL-NFAKVQIDTVVQDFENQLRDASADEINSL-IKESESAIAAIVEAH 652
           H  A+  Q+  Q + +  +++        ENQL DA   ++N+L + + +     +++  
Sbjct: 577 HEVAQARQKADQIISHLRQLERQQGANVKENQLIDAKG-QLNALHMNDPKLKKNKVLQRE 635

Query: 653 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
           +   D  V            G+ V VKS G +   +    G DD   VQ G ++++V ++
Sbjct: 636 KRKHDLKV------------GDAVLVKSYG-QYGELTRKMGKDDWE-VQLGILKMKVNES 681

Query: 713 NIRPIPNSKRKN-----AANPA-PRLRKQVCTCTS 741
           ++     + RKN     A  P  P +R Q    TS
Sbjct: 682 DLE---RTDRKNISEQEAKQPKRPMVRTQQTRQTS 713


>gi|336435678|ref|ZP_08615393.1| hypothetical protein HMPREF0988_00978 [Lachnospiraceae bacterium
           1_4_56FAA]
 gi|336001131|gb|EGN31277.1| hypothetical protein HMPREF0988_00978 [Lachnospiraceae bacterium
           1_4_56FAA]
          Length = 791

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 175/570 (30%), Positives = 278/570 (48%), Gaps = 68/570 (11%)

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           P+IT R  R CV +KA ++  + +G+  + SS+G+T F+EP   V+ NN    L   E  
Sbjct: 186 PIITLRGDRYCVPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ L+ + A+   EI+     + ++D  FAR   A  M    PIL+++       
Sbjct: 245 EIQVILARLSEDTAEYIEEIRTDYRVLTDLDFIFARGQLALSMSASRPILNNEGR----- 299

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
            I+I   +HPLL    +                                   VPI + + 
Sbjct: 300 -IHIRDGRHPLLDARKV-----------------------------------VPITVTLG 323

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
            +  ++++TGPNTGGKT S+KT+GL +LM +AGL++PA +   L  F  + ADIGD QS+
Sbjct: 324 EDFSLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAADRSELAVFHQVYADIGDEQSI 383

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQ+LSTFS H++ IV  L+ V  +SLVL DE+G+GTDP+EG ALA +IL +L +R    +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKDVDEQSLVLFDELGAGTDPTEGAALAIAILSHLHNRGIRTM 443

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L          ENA  EF +E+L+PTYR+L G  G SNA  I+  +G    II
Sbjct: 444 ATTHYSELKVFALSTEGVENACCEFDVESLKPTYRLLIGIPGKSNAFAISGKLGLPDYII 503

Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
           + A+      R   Q     +L   L   +R +E +     +   E+  L  +   + + 
Sbjct: 504 EDAKN-----RLTEQDVSFEDLLTDLENSKRIIEKERDEIQTYKREVERLKTQTRQKQEK 558

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA------SADEINSLIKESE 642
           LD +   +  + T++    L  AK   D  +++F    ++         +      K  +
Sbjct: 559 LDEQRDRILREATEKANAILREAKEMADETMKNFRKFGKEGISAAEMERERERLRKKIKD 618

Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
           +A  + ++  +P   +  S+        + GE V V S+ +   T+  +P     V VQ 
Sbjct: 619 TAGKSALKPQKPKKTYKPSDF-------KLGESVKVLSM-NLTGTISSLPDSRGNVTVQM 670

Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANP-APR 731
           G +R +V  +++  I        ANP AP+
Sbjct: 671 GILRSQVNISDLEIIEE------ANPYAPK 694


>gi|152975927|ref|YP_001375444.1| DNA mismatch repair protein MutS domain-containing protein
           [Bacillus cytotoxicus NVH 391-98]
 gi|152024679|gb|ABS22449.1| DNA mismatch repair protein MutS domain protein [Bacillus
           cytotoxicus NVH 391-98]
          Length = 633

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 159/519 (30%), Positives = 264/519 (50%), Gaps = 63/519 (12%)

Query: 24  LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +I  I+     G +L PSE  +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFLGISNIDNIMQKLEKGMILEPSEFVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
            +         + ++P+L    N  +    +EE+I FCI      +   AS++L+ IR +
Sbjct: 107 LDK--------EFFAPMLAAYANSMSEFKSIEEEIQFCIKGNR--VDSAASKELKRIRNQ 156

Query: 142 ----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
                 +  E L+  L   A + +    I +  I+K+  R  + +KAS+K  +  G  + 
Sbjct: 157 MDSVEGKIKERLNKFLNSSANKKY----IQEFFISKKDDRYTIPVKASYKNQVA-GTIVA 211

Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
           VSS G+T F+EP      N     L   E  EE  IL+ L+  I ++  +IK  ++ V +
Sbjct: 212 VSSKGSTVFIEPNTVTTLNVELASLRAEEAMEEYQILATLSGMILENIYQIKINIELVSQ 271

Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
            DL FA+A F++ + G+ P L+   +      I +   KHPLL G               
Sbjct: 272 YDLVFAKAKFSKQIGGIEPKLNDYGY------IKLVHCKHPLLSGEV------------- 312

Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
                                  +P++ ++  + R ++ITGPN GGKT  +KT+GL +L 
Sbjct: 313 -----------------------IPLNFEIGQKYRSLIITGPNAGGKTIVLKTIGLLTLA 349

Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
           + +G ++  +    +  F+ I  DIGD+QS+E  LSTFS H+  + +I+E+ +  +L+L 
Sbjct: 350 AMSGFHIAGERETEIAVFEHIFVDIGDNQSIENALSTFSSHMKNLSEIMEVSNNNTLLLF 409

Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
           DEIGSGT+P+EG ALA SIL+       + V TTHY ++    +  + F NAA +F  ET
Sbjct: 410 DEIGSGTEPNEGAALAISILEEFYHMGCITVATTHYGEIKRFSEMHSDFMNAAMQFHSET 469

Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           L P Y++L G +G+SNAL I++ +     ++QRA++ +E
Sbjct: 470 LEPMYQLLIGKSGESNALWISRKMNVREHVLQRAKEYME 508


>gi|403389555|ref|ZP_10931612.1| clostridial MutS2-related protein [Clostridium sp. JC122]
          Length = 628

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 161/559 (28%), Positives = 283/559 (50%), Gaps = 64/559 (11%)

Query: 16  SLEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           SL++  ++L++TS    ++ +   + L  I +I   +     G  L PS++  +   LR 
Sbjct: 39  SLKQVNRMLDETSQGRNLLDAGYHIPLEGIFNITNYIEKIEKGAALEPSDLTTISDFLRG 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIGFCIDCKLLIILDRASE 133
              V   + +         + Y+P L     N + L+ +EE+I   I      +   AS 
Sbjct: 99  CRKVKIFIKDK--------EGYAPTLSAYGDNISDLSYIEEEINLSIKSNR--VDSNASR 148

Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYL 189
           +L+ IR    R++E+ +S +++   +  ++      I +  I++R  +  + IKA++K  
Sbjct: 149 ELKKIR----RHIESCESKIREKLEKFLKSSSNKNYIQEFFISERNGKFTIPIKAAYKNS 204

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
           + +G  +  S  G T F+E     ++ +    L + E  EE  IL+LLT  I +  +E+K
Sbjct: 205 I-EGSIIETSPKGTTVFVELASIQKYTSELAVLKSEEDVEEYKILALLTNMIFEKIKELK 263

Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
             +D + E D+ FA+A +++ ++GV P+++   +      INI   K+PLL  S      
Sbjct: 264 MNIDVISEYDMIFAKAKYSKSINGVKPLMNKNGY------INIVKGKYPLLKDS------ 311

Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
                                          VP+D  +  + R ++ITGPN GGKT  +K
Sbjct: 312 -------------------------------VPLDCNIGKDFRTLIITGPNAGGKTVVLK 340

Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
           T+GL +L  ++G ++ AK+   +  F+ +  DIGD+QS+E  LSTFS H+  +  IL+L 
Sbjct: 341 TIGLLTLAVQSGFHIAAKDGTEMAVFNKVFVDIGDNQSIENALSTFSSHVKNLAAILKLS 400

Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
            + +L+L DEIGSGT+P+EG ALA SIL+    +  + V +THY ++         FENA
Sbjct: 401 DKSTLLLFDEIGSGTEPNEGAALAISILEEFYHKGCITVASTHYGEIKNFSFNHPDFENA 460

Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
           A EF  +TL P Y++  G +G+SNAL IA+ +G D+ +I+R ++ ++         R S+
Sbjct: 461 AMEFKCDTLEPLYKLQIGKSGNSNALYIAEKMGIDKPVIERTKEYIKNKNYNYDFLRSSK 520

Query: 550 LYQSLMEERRKLESQARTA 568
           + ++  E +R+     +  
Sbjct: 521 IIKNEKEAKREYNCDYKVG 539


>gi|326803291|ref|YP_004321109.1| recombination and DNA strand exchange inhibitor protein [Aerococcus
           urinae ACS-120-V-Col10a]
 gi|326651631|gb|AEA01814.1| recombination and DNA strand exchange inhibitor protein [Aerococcus
           urinae ACS-120-V-Col10a]
          Length = 795

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 183/569 (32%), Positives = 285/569 (50%), Gaps = 70/569 (12%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
           L L  + D+  ++     G +L+  E+  V R L++V+ V     E  +LD D  Q    
Sbjct: 63  LPLGQLVDVGPLMKRLDIGGILNGQELAHVGRVLKSVSEVSHFFKEIEDLDIDVEQMQGY 122

Query: 99  LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLK 154
           + +   + +   ++ + I    D     + D AS  L  IR    AE      +LD+++K
Sbjct: 123 VSDFANHKDLAKKINQAI--ASDGS---VYDEASSHLHSIRQSIKAEEAHIRMSLDNIIK 177

Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
                  QA  +   ++T R  R  + +K  ++     G+  + S+SG T ++EP+  +E
Sbjct: 178 SS-----QADYLSDQIVTIRNDRYVLPVKQEYRRKFG-GVVHDQSASGQTLYIEPQVVME 231

Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
            NN    L   E AE   I + L+A++A   +EI      + ++D   A+  +A+     
Sbjct: 232 SNNKVHSLRIEEQAEIERIFAELSADLAPHSQEINQNNQILGQLDFIQAKWRYAKKQGAH 291

Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
            P+++ Q H     S+N+E   HPLL               NP K+ V N+         
Sbjct: 292 RPLIA-QDH----QSLNLEEAVHPLL---------------NP-KTAVANT--------- 321

Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
                     I  + + R+++ITGPNTGGKT ++KT GL  LM ++GLY+ AK   R+  
Sbjct: 322 ----------ISFDGDYRMLIITGPNTGGKTITLKTTGLLQLMGQSGLYITAKADSRIGV 371

Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
           FD I ADIGD QS+E NLSTFSGH++ I+ ILE +  +SLVLIDE+GSGTDP EG ALA 
Sbjct: 372 FDHIFADIGDEQSIEANLSTFSGHMTNIISILEAIDDQSLVLIDELGSGTDPKEGAALAM 431

Query: 455 SILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
           +IL  L  +VG  V+ TTHY +L     ++    NA+ EF  +TL PTYR+L G  G SN
Sbjct: 432 AILNRLA-QVGCTVLATTHYPELKAYAFEEPNAINASVEFDEKTLTPTYRLLIGQPGRSN 490

Query: 514 ALNIAKSIGFDRKIIQRAQ-----------KLVERLRPERQQHRKSE--LYQSLMEERRK 560
           A +I++ +G D+ I+  A+           ++++ L  +RQ + +    L Q L E  + 
Sbjct: 491 AFDISQRLGLDQSIVDEARYYVGEESQSLNEMIDDLDEKRQAYERDNQALSQDLQEADKL 550

Query: 561 LESQARTAASLHAEIMDLYREIEDEAKDL 589
           L    +   +L  + +      + EA DL
Sbjct: 551 LADLKKAYHALENDKITYLNRAKREANDL 579


>gi|257893780|ref|ZP_05673433.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
 gi|257830159|gb|EEV56766.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
          Length = 642

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 162/511 (31%), Positives = 255/511 (49%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDTLTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S L K          I + +I ++     + IK S+K  + DG  ++ S+ G T 
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKVSYKNKV-DGTIIDESNKGTTV 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            F++ ++G+ P ++   H+       I+  +HP L                         
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  VP+DI++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVPLDIEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|339629769|ref|YP_004721412.1| MutS2 family protein [Sulfobacillus acidophilus TPY]
 gi|379007116|ref|YP_005256567.1| MutS2 protein [Sulfobacillus acidophilus DSM 10332]
 gi|339287558|gb|AEJ41669.1| MutS2 family protein [Sulfobacillus acidophilus TPY]
 gi|361053378|gb|AEW04895.1| MutS2 protein [Sulfobacillus acidophilus DSM 10332]
          Length = 773

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 195/687 (28%), Positives = 323/687 (47%), Gaps = 91/687 (13%)

Query: 54  AVSGQLLSPSEICAVRRTLRAVNNVWKKLTE---AAELDGDSLQRYSPLLELLKNCNFLT 110
           A  G +L+  E+ A+++T+R   ++W  L +    A L    L    P   LL + + + 
Sbjct: 76  AARGGVLTIPELTAIQKTIRVYQSIWTALDQRSGYARLSAAILP-IEPPRALLAHLDRVL 134

Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-LDSLLKKVAAQIFQAGGIDKP 169
           + E ++            D AS  L  IR  R R++E  +  L  ++      A  + +P
Sbjct: 135 DAEGRVQ-----------DHASPALAHIRG-RMRDLEREILQLFDRILHAPDWAPYLQEP 182

Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
           L+T R  R  + ++  ++  +P G+  + SSSG T ++EP  A+E  N    L   E  E
Sbjct: 183 LVTVRFGRRVIPVRHEYRNQVP-GVVQDFSSSGQTVYVEPLAALERQNRLSGLMQEEAEE 241

Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEID--LAFARAGFAQWMDGVCPILSSQSHVSFD 287
              IL+ L+ E+A    E+  +  R+   D  +  AR G       V P +         
Sbjct: 242 IERILAELSREVAGVANELSAIQTRIGWFDELVGIARYGLK--TQSVIPQIGG------- 292

Query: 288 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 347
             +++ G  HPLL                                       PVPI + +
Sbjct: 293 DRLHLIGACHPLLTQ-------------------------------------PVPIQVDL 315

Query: 348 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 407
             +  V++I+GPNTGGKT ++KT+GL ++M   GL +PA     +PWF  I AD+GD QS
Sbjct: 316 TRDRPVLIISGPNTGGKTVALKTVGLIAVMGLTGLMVPAHEDSTIPWFRAIWADVGDQQS 375

Query: 408 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
           LE NLSTFSGH++R+  ++E    ++L LIDEIG+GTDP EG ALA +++++L      +
Sbjct: 376 LEHNLSTFSGHLARLAPMMEDAGEDTLCLIDEIGAGTDPEEGAALAEAMIRHLAQSRAYS 435

Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
           V++TH+  L  L  KD R +NA  EF  ETL PTYR++ G  G S A  IA+ +GF   +
Sbjct: 436 VISTHFNRLKLLAYKDDRIQNARVEFDPETLAPTYRLILGEPGSSYAFYIARRLGFPPAL 495

Query: 528 IQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
           +  A+ L+  E +   R     ++L+  + EE    E++ R   +L AE    + +    
Sbjct: 496 LDAAEALLPDEAVALTRALEEVNQLHHRVAEE----EARLRAERALLAEAQAAFEQ---- 547

Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 645
                 +A  L+  E  + + E  + + Q+D + + F + +++    E  + ++  E+  
Sbjct: 548 -----EQARWLEKWERDRSRAEATW-RQQLDQLTRRFNDLMQEYRQSEAENRVRALEAIR 601

Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
             +  A +       +   T +     G+ V V    D +  VVE+ G  +T  VQ G +
Sbjct: 602 QELRTAGQIPAPIRRARRTTPAAPLAVGQSVRVTGFAD-VGQVVEMNG--NTATVQIGAL 658

Query: 706 RVRVKKNNIRP------IPNSKRKNAA 726
           R+++  + + P       P   R+ AA
Sbjct: 659 RMKLAVSELEPAGDTALTPTRSRRTAA 685


>gi|404371451|ref|ZP_10976755.1| MutS2 protein [Clostridium sp. 7_2_43FAA]
 gi|226912421|gb|EEH97622.1| MutS2 protein [Clostridium sp. 7_2_43FAA]
          Length = 785

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 190/605 (31%), Positives = 296/605 (48%), Gaps = 72/605 (11%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           I D+AS  L  IR    RN++  +S ++     I +A    +   L T R  R  + +KA
Sbjct: 145 ISDKASSTLNGIR----RNLKEKNSSVRDKINSIVRANAKYLQDTLYTMRGDRYVLPVKA 200

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            +K  +P G+  + SS+GAT F+EP   V  NN    L   E AE   IL  L+  + ++
Sbjct: 201 EYKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELKLKEKAEIERILMDLSNRVYEN 259

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
              ++     + E+D  FA+  +A  ++ +CP       V+ D S +I   +HPL+    
Sbjct: 260 IETVESNYKILTELDFIFAKGKYASSLNAICP------EVNEDRSFDIIQGRHPLI---- 309

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
                      +P                       VP DI +  E   ++ITGPNTGGK
Sbjct: 310 -----------DP--------------------KVVVPSDIYLGKEFNTLMITGPNTGGK 338

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T ++KT+GL  LM  +GL +PAK+   + +F  I ADIGD QS+EQ+LSTFS H++ IV 
Sbjct: 339 TVTLKTVGLLHLMGLSGLLIPAKDASSISFFTKIFADIGDEQSIEQSLSTFSSHMTNIVK 398

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           I++     SLVL DE+GSGTDP EG ALA +I+  LR++    + TTHY++L     +  
Sbjct: 399 IMKEADDSSLVLFDELGSGTDPVEGAALAIAIIDTLREQEARLIATTHYSELKGYALRTA 458

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE- 541
             ENA+ EF +ETLRPTYR+L G  G SNA  I+K +G    +I +A+  +  E L+ E 
Sbjct: 459 GIENASVEFDVETLRPTYRLLIGVPGKSNAFEISKRLGLQDDVINKAKSNISSENLQFED 518

Query: 542 --RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH-LKA 598
             R    KS L      E ++++ +A      + E      E+ D+A +  RR A  + A
Sbjct: 519 LIRDLQEKSILANRDAREAKRIKIEAEELKKKYDEKFKKLEEVRDKAYNEARREAKDIIA 578

Query: 599 KETQQVQQELN-FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
           K   +  + L    +++   + Q    +L +      +SL K+ ES              
Sbjct: 579 KAKDEADEILKAMRELEKLGISQGGRARLEEERKKLKDSLEKKEESL------------- 625

Query: 658 FSVSETNTSSFTPQ--FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
           + + E NT     +   G   ++ SL   +  ++ +P     V V+ G M++ VK  ++R
Sbjct: 626 YKIRE-NTGEVIEKVILGMDAYLPSLNQNV-IIITMPDSRGEVQVEAGIMKINVKLKDLR 683

Query: 716 PIPNS 720
            + N+
Sbjct: 684 KVNNT 688


>gi|410459253|ref|ZP_11313005.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           azotoformans LMG 9581]
 gi|409930446|gb|EKN67445.1| recombination and DNA strand exchange inhibitor protein [Bacillus
           azotoformans LMG 9581]
          Length = 785

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 209/687 (30%), Positives = 332/687 (48%), Gaps = 70/687 (10%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I D+   L  A  G  LS SE+  +  T+     + K   EA   DG  L   S  +
Sbjct: 65  LGGIFDVRPSLKRAQIGGDLSASELLDIASTIYGGRQI-KNFIEAMVEDGVELPILSSYI 123

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSLLKKV 156
           E L     LT+LE KI  CID    + +D AS+ L    + +R+   R  E L+++ +  
Sbjct: 124 EQLTT---LTDLERKIKNCIDDHGHV-MDGASDKLRSIRQTLRSAESRIREKLENMTRSS 179

Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
            AQ   +  I    IT R  R  + +K  ++     GI  + S+SGAT F+EP+  VE N
Sbjct: 180 NAQKMLSDAI----ITIRNDRFVIPVKQEYRSAY-GGIVHDQSASGATLFIEPQAVVELN 234

Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
           N        E  E   IL  LT  +A+    + + +  + EID  FA+A F Q +    P
Sbjct: 235 NTLQEARAKEKQEVERILHELTLFVAEDAESMLHNVKILTEIDFMFAKASFGQKIKASMP 294

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
            ++ +  +    +      +HPL+                    D++             
Sbjct: 295 KMNREGRIRLFKA------RHPLI--------------------DIKQV----------- 317

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
               VP DI +  +   +VITGPNTGGKT ++KTLGL +LM++AGL +PA +   +  F 
Sbjct: 318 ----VPNDIILGEDYSAIVITGPNTGGKTVTLKTLGLLTLMAQAGLQIPALDGSEMTVFS 373

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            + ADIGD QS+EQ+LSTFS H++ IV+IL+ V   SLVL DE+G+GTDP EG ALA +I
Sbjct: 374 SVFADIGDEQSIEQSLSTFSSHMTNIVEILKQVDANSLVLFDELGAGTDPQEGAALAIAI 433

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L  + +R    V TTHY +L       +   NA+ EF +ETL PTYR+L G  G SNA  
Sbjct: 434 LDDVYNRGAKVVATTHYPELKAYGYNRSGVINASVEFDVETLSPTYRLLLGVPGRSNAFE 493

Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
           I+K +G  + +I+ A+  V      ++ ++   +  SL E +++ E +   A  +  +  
Sbjct: 494 ISKRLGLSQHVIENAKGYV-----SQETNKVENMIASLEESKKQAEEEWSEAEDIRKDAE 548

Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEIN 635
            L++E++ +          +  K  +  ++ +  AK   + +++D    +   A A + +
Sbjct: 549 HLHQELQKQIIAFYEERDKILEKAEEDAKEAIEKAKGDAEAIIRDLRKMKFNAAQAVKEH 608

Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
            LI E+   +   V   + +      +       P  G++V V SL D+   +VE   + 
Sbjct: 609 ELI-EARKRLEEAVPTLQKNKKIVQKQKAKQKLLP--GDEVKVVSL-DQRGHIVEQVSEG 664

Query: 696 DTVLVQYGKMRVRVKKNNI----RPIP 718
           +   VQ G ++++VK+ ++    RP P
Sbjct: 665 E-FQVQIGILKMKVKEKDLEYISRPTP 690


>gi|325568915|ref|ZP_08145208.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus ATCC
           12755]
 gi|325157953|gb|EGC70109.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus ATCC
           12755]
          Length = 787

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 174/512 (33%), Positives = 259/512 (50%), Gaps = 80/512 (15%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS  L  IR   +R      E LD +++   A+      +   ++T R  R  + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 239
           K  ++ +   G+  + SSSG T F+EPK  VE NN   RL   +IAE    T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILTELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+A  +REI +    +  +D   A+A F + M  + P ++  +HV F  +      +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKDYQAVVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  +M +AGL + A+   ++  F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGIFNEIFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           + IVD+L+ V   SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TTIVDVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
               +   NA+ EF ++TL PTYR+L G  G SNA  I+K +G    II +A++++    
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPETIIDQAKEIM---- 511

Query: 540 PERQQHRKSELYQSLMEERRKL--------ESQARTAASLHAEIMDLYRE-IEDEAKDLD 590
            + +    +E+   L E RRK+            + AA LH E+   Y    E+  K+L 
Sbjct: 512 -DGESQDLNEMIADL-ENRRKMTETEYLEVRHHVKEAARLHQELEAAYSYFFEEREKEL- 568

Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
                  AK  Q+  Q +  AK + + ++ D 
Sbjct: 569 -------AKARQKANQIVEEAKEESEKIIADI 593


>gi|431762915|ref|ZP_19551468.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E3548]
 gi|430622609|gb|ELB59319.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E3548]
          Length = 642

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 162/511 (31%), Positives = 255/511 (49%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDTLTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S L K          I + +I ++     + IK S+K  + DG  ++ S+ G T 
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKVSYKNKV-DGTIIDESNKGTTV 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            F++ ++G+ P ++   H+       I+  +HP L                         
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  VP+DI++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVPLDIEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMTFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|431038291|ref|ZP_19492485.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1590]
 gi|430562325|gb|ELB01567.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1590]
          Length = 642

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 162/511 (31%), Positives = 255/511 (49%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDTLTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S L K          I + +I ++     + IK S+K  + DG  ++ S+ G T 
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKVSYKNKV-DGTIIDESNKGTTV 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            F++ ++G+ P ++   H+       I+  +HP L                         
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  VP+DI++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVPLDIEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|304385591|ref|ZP_07367935.1| DNA mismatch repair protein MutS2 [Pediococcus acidilactici DSM
           20284]
 gi|304328095|gb|EFL95317.1| DNA mismatch repair protein MutS2 [Pediococcus acidilactici DSM
           20284]
          Length = 636

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 168/512 (32%), Positives = 256/512 (50%), Gaps = 55/512 (10%)

Query: 26  QTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
           +T  A  +++S Q + L  ++ I  ++N    G +L+P+E+      LR+ N + KK  E
Sbjct: 50  ETKEARIIIESGQYIPLLGLKQINRLMNKIDKGVILTPAELIEFADFLRS-NRMLKKFFE 108

Query: 85  AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
                  +L +YS  L      +  T  EE I   +D     +LD AS DL   R + K 
Sbjct: 109 KNRYQTPTLYKYSQAL------SKFTTTEEHIYQKVDD--YEVLDDASRDLRKARRQFKT 160

Query: 145 NMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 204
             + +   L K          I   LI +++  + V IKAS+K+ +P G  ++ SS+G T
Sbjct: 161 IKDEIQDKLMKFLRSPKNKPMIQDVLIVEKQGSITVPIKASYKFKVP-GTIVDQSSNGQT 219

Query: 205 YFMEPKGAVEFNNMEVRLSNSEI-AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
            ++E     + N  ++    + I +E   IL+ LT E+++    I   +D V   D+ FA
Sbjct: 220 VYIELDLVAKLNE-KLAFQKAVIESESYQILAELTGELSEQRTSILNAIDAVTMFDIIFA 278

Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
           RA +++  DG+ P ++          INI   +HP L+G+                    
Sbjct: 279 RAKYSREYDGITPQINQAER------INIIQGRHPFLVGT-------------------- 312

Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
                           PVP+D ++  + R ++ITG N GGKT  MKT+GL +LM+ AGL 
Sbjct: 313 ----------------PVPLDFQLGKDYRGLIITGANAGGKTIVMKTVGLLTLMAMAGLQ 356

Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
           +PA+    L  FD +  DIGD Q++E  LSTFS H+  I  I++   R +LVL+DE+GSG
Sbjct: 357 VPAQAGTELAVFDQLFVDIGDEQNIENQLSTFSAHMKNIAKIVQKAGRNTLVLLDELGSG 416

Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
           TDP+EG  LA +IL+ L  +  L V TTHY ++     K   F  AA +F  ETL P Y 
Sbjct: 417 TDPNEGAGLAIAILEDLYRKGALIVATTHYGEIKNFTKKHADFTPAAMKFDRETLTPKYV 476

Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           +  G  GDS AL IA+ +   + +IQRA K +
Sbjct: 477 LQVGEVGDSQALWIAQKMRLPKALIQRAGKYI 508


>gi|303230741|ref|ZP_07317488.1| putative recombination and DNA strand exchange inhibitor protein
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302514501|gb|EFL56496.1| putative recombination and DNA strand exchange inhibitor protein
           [Veillonella atypica ACS-049-V-Sch6]
          Length = 792

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 189/666 (28%), Positives = 323/666 (48%), Gaps = 87/666 (13%)

Query: 98  PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSL 152
           PLL L +++   +  +E+++    D K  + LD AS  L  +R      R R   ++ ++
Sbjct: 112 PLLSLWMQDMPNMDRVEQRLKRVFDEKGEL-LDTASPKLASLRNTISKTRDRIKHDIQAI 170

Query: 153 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
           L     Q +      + +IT+R +R  + +K  ++    DG+  + S++G T ++EP   
Sbjct: 171 LHDKDNQKY----FQEAIITQRNNRYVIPVKQEYRQYF-DGLIHDRSATGQTLYIEPMRL 225

Query: 213 VEFNNMEVRLSNSEIAEETAILSL---LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 269
           VE NN    L  + I EE  +L +   L+A I +   ++    ++V  I+  + +A  A 
Sbjct: 226 VELNN---DLQEALIGEEQEVLRIYKELSALIKQHSNDLMDACEKVSHIEFVYGKAKLAI 282

Query: 270 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
               V      Q+ +S    +N+   +HPL+  +++                        
Sbjct: 283 AQKAV------QATLSEGRDVNLMRARHPLIPANTV------------------------ 312

Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
                      VP DI++  + R+++ITG NTGGKT S+KTLGL SLM+++GL++PA++ 
Sbjct: 313 -----------VPTDIRLGTDYRILLITGSNTGGKTVSLKTLGLLSLMNQSGLFIPAEHG 361

Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 449
             LP F  I ADIGD QS+E +LSTFS H+++++ I++      LVL+DE+GSGTDP EG
Sbjct: 362 SILPIFHNIFADIGDEQSIEASLSTFSAHMTQVISIIKHCGPNDLVLLDELGSGTDPEEG 421

Query: 450 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
            ALA SIL++ R +  L +V+THY +L          EN   EF   TL+PTYR+  G  
Sbjct: 422 SALAVSILEFFRQKGTLMMVSTHYNELKNYAYHTAGIENGHVEFDERTLKPTYRLHIGVA 481

Query: 510 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 569
           G S+AL+IA  +G  + I+ RA       R  + +   SE+   L +   +L   +    
Sbjct: 482 GSSHALSIAARLGLPKDIVNRA-------RDYKSKFGSSEMENVLTDLNEQLRKSSERER 534

Query: 570 SLHAEIMDLYR---EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 626
           +L  E+ +  R   ++E E K  + +   + AK     +      +V+ + +++  + Q 
Sbjct: 535 ALKKELDETRRMRGQLEREKKQFNEKRKQMLAKAQADAESMKRSLRVEGEAIIKQLKAQF 594

Query: 627 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 686
            + + D+  S I  +   I+ +   H P+   +      S      G+ V+V SL   L 
Sbjct: 595 SETNKDKRLSAINAARKGISNV---HVPEAPVNDDRKTLSIDAVAIGQVVYVTSL-RSLG 650

Query: 687 TVVEVPGDDDTVLVQYGKMRVRV--------------KKNNIRPIPNSKRKNAANPAPRL 732
           TV+ + G+  TV +      V+V              +++N++  P + RK A   A + 
Sbjct: 651 TVLSIKGNRVTVDINGLSATVKVNELQSTTREESNKIQRDNLKAQPKT-RKKAGGTAVQR 709

Query: 733 RKQVCT 738
           +K+V T
Sbjct: 710 QKEVRT 715


>gi|419718852|ref|ZP_14246154.1| MutS2 family protein [Lachnoanaerobaculum saburreum F0468]
 gi|383304971|gb|EIC96354.1| MutS2 family protein [Lachnoanaerobaculum saburreum F0468]
          Length = 785

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 213/720 (29%), Positives = 339/720 (47%), Gaps = 84/720 (11%)

Query: 19  ESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
           E Q+  + T+AAL  ++ +  L LS ++DI   L     G  LS +E+  +   L  +N 
Sbjct: 42  EIQRNQSHTTAALDRIRLKGNLSLSEVKDIKDSLKRLEIGSSLSQAELMKI---LSILNA 98

Query: 78  VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
             K ++     D      Y  L E  +  +    L++++  CI  +  I+ D AS +L  
Sbjct: 99  SAKAISYGLHSDD---PEYDVLEEYFRGLDECGPLKKELSRCIISEE-IMADNASPELSH 154

Query: 138 IRAERKRNMEN------LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
           IR  RK N  N      L+++L      +  A      +IT+R    C+ IK+ +K  + 
Sbjct: 155 IR--RKINQINSKMHTELNNILNAHREYLMDA------VITQRDGAYCLPIKSEYKNKVA 206

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
            G+  + SS+G+T F+EP   +  NN    LS  E  E   IL  L+   A     ++  
Sbjct: 207 -GVVHDQSSTGSTVFIEPLAIIRMNNELKSLSMDEKKEIEKILESLSLLAADYINILENN 265

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
              ++ +D  +A+A  ++ M+G  P  +S+ +      INI+  +HPLL    +      
Sbjct: 266 SKNLIFLDFVYAKANLSKKMNGSEPKFNSKHY------INIKEGRHPLLDTKKV------ 313

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
                                        VPI+I +     +++ITGPNTGGKT S+KT+
Sbjct: 314 -----------------------------VPINISLGDTYDLLIITGPNTGGKTVSLKTV 344

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
           GL ++M ++GL++PA     L  FD + ADIGD QS+EQ+LSTFSGH+  IV IL     
Sbjct: 345 GLFTIMGQSGLHIPAFEGSELSVFDDVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADA 404

Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
            SL L DE+ +GTDP+EG ALA SIL +L       + TTHY++L      +   ENA+ 
Sbjct: 405 GSLCLFDELCAGTDPTEGAALAISILSFLHRMKSRCIATTHYSELKVFALNEPGVENASC 464

Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
           EF + TL PTYRIL G  G SNA  IA  +G    II  A   +E+   + +     +L 
Sbjct: 465 EFDVATLSPTYRILIGVPGKSNAFAIAGKLGLPDYIIFEAGTHLEKDAKDFE-----DLL 519

Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
             L  +R+ +E    +      EI  L R  + + ++L  +   +  +  +  ++ L  A
Sbjct: 520 TKLENDRQIIEKDKLSIQKYKKEIESLKRHYDKQEENLAAKKEKILEEAKESARKILEEA 579

Query: 612 KVQIDTVVQDFENQLRDASA-----DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
           KV  D  +++  N++   +      +E  + ++ES +     VE  +P      +     
Sbjct: 580 KVTADDTIKNI-NKIASGAGLGSALEEQRTRLRESINKNTKSVEVKKP------TNKLKK 632

Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI--PNSKRKN 724
               + G+ VHV SL      V  +P     + VQ G +R +V  ++I  I  P+ K +N
Sbjct: 633 PKELKLGDSVHVISLNLD-GIVSSLPNQSGNLFVQMGILRSQVNISDIALIDEPDKKPEN 691


>gi|401680135|ref|ZP_10812059.1| MutS2 family protein [Veillonella sp. ACP1]
 gi|400219262|gb|EJO50133.1| MutS2 family protein [Veillonella sp. ACP1]
          Length = 792

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 209/749 (27%), Positives = 356/749 (47%), Gaps = 100/749 (13%)

Query: 18  EESQKLLNQTSAALAMMQS---QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           E+ Q+ L++T+ AL   Q+   QPL      DI      +    +LS   I  V  T+ A
Sbjct: 39  EKIQEALDETAEALRSWQTEIEQPL--GGTRDIRESCKKSRKDFVLSREAIWDVYITIGA 96

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
               +K++   A+        Y PLL L +++   +  +E+++    D K  + LD AS 
Sbjct: 97  ----YKRM---AKFFRAKYMEY-PLLSLWMQDMPNMDRVEQRLKRVFDEKGEL-LDTASP 147

Query: 134 DLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L  +R      R R   ++ ++L     Q +      + +IT+R +R  + +K  ++  
Sbjct: 148 KLASLRNTISKTRDRIKHDIQAILHDKDNQKY----FQEAIITQRNNRYVIPVKQEYRQY 203

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAKSER 246
             DG+  + S++G T ++EP   V+ NN    L  + I EE  +L +   L+A I +   
Sbjct: 204 F-DGLIHDRSATGQTLYIEPMRLVQLNN---DLQEALIGEEQEVLRIYKELSALIKQHSN 259

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           ++    ++V  I+  + +A  A     V      Q+ +S    +N+   +HPL+  +++ 
Sbjct: 260 DLMDACEKVSHIEFVYGKAKLAIAQKAV------QATLSEGRDVNLMRARHPLIPANTV- 312

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                                             VP DI++  + R+++ITG NTGGKT 
Sbjct: 313 ----------------------------------VPTDIRLGTDYRILLITGSNTGGKTV 338

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           S+KTLGL SLM+++GL++PA +   LP F  I ADIGD QS+E +LSTFS H+++++ I+
Sbjct: 339 SLKTLGLLSLMNQSGLFIPADHGSILPIFHNIFADIGDEQSIEASLSTFSAHMTQVISII 398

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           +      LVL+DE+GSGTDP EG ALA SIL++ R +  L +V+THY +L          
Sbjct: 399 KHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRQKGTLMMVSTHYNELKNYAYHTAGI 458

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
           EN   EF   TL+PTYR+  G  G S+AL+IA  +G  + I+ RA       R  + +  
Sbjct: 459 ENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVNRA-------RDYKSKFG 511

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYR---EIEDEAKDLDRRAAHLKAKETQQ 603
            SE+   L +   +L   +    +L  E+ +  R   ++E E K  + +   + AK    
Sbjct: 512 SSEMENVLTDLNEQLRKSSERERALKKELDETRRMRGQLEREKKQFNEKRKQMLAKAQAD 571

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
            +      +V+ + +++  + Q  + + D+  S I  +   I+ +   H PD     +  
Sbjct: 572 AESMKRSLRVEGEAIIKQLKAQFSETNKDKRQSAINAARKDISNV---HVPDAPIDDNRK 628

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV-------------- 709
             +      G+ V+V SL   L TV+ + G+  TV +      V+V              
Sbjct: 629 ELTIDAVAIGQVVYVTSL-RSLGTVLSIKGNRVTVDINGLSATVKVNDLQSTTREESNKI 687

Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQVCT 738
           +++N++  P + RK A   A + +K+V T
Sbjct: 688 QRDNLKAQPKT-RKKAGGSAVQRQKEVRT 715


>gi|429759588|ref|ZP_19292086.1| MutS2 family protein [Veillonella atypica KON]
 gi|429179549|gb|EKY20796.1| MutS2 family protein [Veillonella atypica KON]
          Length = 792

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 209/751 (27%), Positives = 355/751 (47%), Gaps = 100/751 (13%)

Query: 16  SLEESQKLLNQTSAALAMMQS---QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           S E+ Q+ L++T+ AL   Q+   QPL      DI      +    +LS   I  V  T+
Sbjct: 37  SREKIQEALDETAEALRSWQTEIEQPL--GGTRDIRESCKKSRKDFVLSREAIWDVYITI 94

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRA 131
            A   + K    A  ++        PLL L +++   +  +E+++    D K  + LD A
Sbjct: 95  GAYKRMVK-FFRAKYME-------YPLLSLWMQDMPNMDRVEQRLKRVFDEKGEL-LDTA 145

Query: 132 SEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
           S  L  +R      R R   ++ ++L     Q +      + +IT+R +R  + +K  ++
Sbjct: 146 SPKLASLRNTISKTRDRIKHDIQAILHDKDNQKY----FQEAIITQRNNRYVIPVKQEYR 201

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAKS 244
               DG+  + S++G T ++EP   VE NN    L  + I EE  +L +   L+A I + 
Sbjct: 202 QYF-DGLIHDRSATGQTLYIEPMRLVELNN---DLQEALIGEEQEVLRIYKELSALIKQH 257

Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
             ++    ++V  I+  + +A  A     V      Q+ +S    +N+   +HPL+  ++
Sbjct: 258 SNDLMDACEKVSHIEFVYGKAKLAIAQKAV------QATLSEGRDVNLMRARHPLIPANT 311

Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
           +                                    P DI++  + R+++ITG NTGGK
Sbjct: 312 V-----------------------------------APTDIRLGTDYRILLITGSNTGGK 336

Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
           T S+KTLGL SLM+++GL++PA++   LP F  I ADIGD QS+E +LSTFS H+++++ 
Sbjct: 337 TVSLKTLGLLSLMNQSGLFIPAEHGSILPIFHNIFADIGDEQSIEASLSTFSAHMTQVIS 396

Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
           I++      LVL+DE+GSGTDP EG ALA SIL++ R +  L +V+THY +L        
Sbjct: 397 IIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRQKGTLMMVSTHYNELKNYAYHTA 456

Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
             EN   EF   TL+PTYR+  G  G S+AL+IA  +G  + I+ RA       R  + +
Sbjct: 457 GIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVNRA-------RDYKSK 509

Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYR---EIEDEAKDLDRRAAHLKAKET 601
              SE+   L +   +L   +    +L  E+ +  R   ++E E K  + +   + AK  
Sbjct: 510 FGSSEMENVLTDLNEQLRKSSERERALKKELDETRRMRGQLEREKKQFNEKRKQMLAKAQ 569

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
              +      +V+ + +++  + Q  + + D+  S I  +   I+ +   H P+   +  
Sbjct: 570 DDAESMKRSLRVEGEAIIKQLKAQFSETNKDKRLSAINAARKGISNV---HVPEAPVNDD 626

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV------------ 709
               S      G+ V+V SL   L TV+ + G+  TV +      V+V            
Sbjct: 627 RKTLSIDAVAIGQVVYVTSL-RSLGTVLSIKGNRVTVDINGLSATVKVNELQSTTREESN 685

Query: 710 --KKNNIRPIPNSKRKNAANPAPRLRKQVCT 738
             +++N++  P + RK A   A + +K+V T
Sbjct: 686 KIQRDNLKAQPKT-RKKAGGSAVQRQKEVRT 715


>gi|420263850|ref|ZP_14766486.1| DNA mismatch repair protein MutS [Enterococcus sp. C1]
 gi|394769292|gb|EJF49155.1| DNA mismatch repair protein MutS [Enterococcus sp. C1]
          Length = 787

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 173/512 (33%), Positives = 259/512 (50%), Gaps = 80/512 (15%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS  L  IR   +R      E LD +++   A+      +   ++T R  R  + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 239
           K  ++ +   G+  + SSSG T F+EPK  VE NN   RL   +IAE    T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILAELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+A  +REI +    +  +D   A+A F + M  + P ++  +HV F  +      +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKDYQAVVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  +M +AGL + A+   ++  F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGIFNEIFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           + IVD+L+ +   SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TTIVDVLKKIDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
               +   NA+ EF ++TL PTYR+L G  G SNA  I+K +G    II +A++++    
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPETIIDQAKEIM---- 511

Query: 540 PERQQHRKSELYQSLMEERRKL--------ESQARTAASLHAEIMDLYRE-IEDEAKDLD 590
            + +    +E+   L E RRK+            + AA LH E+   Y    E+  K+L 
Sbjct: 512 -DGESQDLNEMIADL-ENRRKMTETEYLEVRHHVKEAARLHQELEAAYSYFFEEREKEL- 568

Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
                  AK  Q+  Q +  AK + + ++ D 
Sbjct: 569 -------AKARQKANQIVEEAKEESEKIIADI 593


>gi|423519234|ref|ZP_17495715.1| MutS2 protein [Bacillus cereus HuA2-4]
 gi|401159591|gb|EJQ66974.1| MutS2 protein [Bacillus cereus HuA2-4]
          Length = 786

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 206/697 (29%), Positives = 338/697 (48%), Gaps = 85/697 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  L    P+L
Sbjct: 65  LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDSGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             A    +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAPKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +    
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++++ ++    +      +HPL+               +P                  
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   +  F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SNA 
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNRDQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            I+K +G   ++I RA+  +           K E   + +EE +K   + R  A  H + 
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546

Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
            + L+RE++ +  + +        K  ++ ++++  AK + + ++Q+   QLR A    +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKQEAEGIIQEL-RQLRKAQLINV 605

Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
             + LI+     E A   +V+  +          N  +  P+     G++V V + G K 
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKG 656

Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
             + +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 657 QLLKKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|229013753|ref|ZP_04170881.1| hypothetical protein bmyco0001_41620 [Bacillus mycoides DSM 2048]
 gi|423489714|ref|ZP_17466396.1| MutS2 protein [Bacillus cereus BtB2-4]
 gi|423495437|ref|ZP_17472081.1| MutS2 protein [Bacillus cereus CER057]
 gi|423497768|ref|ZP_17474385.1| MutS2 protein [Bacillus cereus CER074]
 gi|228747422|gb|EEL97297.1| hypothetical protein bmyco0001_41620 [Bacillus mycoides DSM 2048]
 gi|401150344|gb|EJQ57803.1| MutS2 protein [Bacillus cereus CER057]
 gi|401162248|gb|EJQ69606.1| MutS2 protein [Bacillus cereus CER074]
 gi|402431005|gb|EJV63077.1| MutS2 protein [Bacillus cereus BtB2-4]
          Length = 786

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 207/694 (29%), Positives = 339/694 (48%), Gaps = 79/694 (11%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  I DI   +  A  G +LSP E+  +  T+     + + + +  + +G  L    P+L
Sbjct: 65  LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119

Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
           E  +     L +LE+KI  CI     ++ D AS+ L  IR +      R  E L+++ + 
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178

Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
             AQ   +  I    +T R  R  + +K  ++ +   GI  + S+SG T F+EP+  VE 
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233

Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
           NN        E  E   IL +LT E+A     +   ++ V  +D  FA+A +A+ +    
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293

Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
           PI++++ ++    +      +HPL+               +P                  
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314

Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
             +  VP +I +  +   +VITGPNTGGKT ++KT+G+  LM+++GL++P  +   +  F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372

Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
             I ADIGD QS+EQNLSTFS H+  IVDILE    ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           IL  + +R    V TTHY +L        +  NA+ EF + TL PTY++L G  G SNA 
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
            I+K +G   ++I RA+  +           K E   + +EE +K   + R  A  H + 
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546

Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
            + L+RE++ +  + +        K  ++ ++++  AK + + ++ +   QLR A    +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVNV 605

Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLATV 688
             + LI+     E A   +V+  +      V   NT+     + G++V V + G K   +
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK------VHVKNTAPKQQLRSGDEVKVLTFGQKGQLL 659

Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
            +V   D    VQ G ++++VK++N+  I   K+
Sbjct: 660 EKVS--DTEWSVQIGILKMKVKESNMEYINTPKQ 691


>gi|15612939|ref|NP_241242.1| DNA mismatch repair protein [Bacillus halodurans C-125]
 gi|10172989|dbj|BAB04095.1| DNA mismatch repair protein [Bacillus halodurans C-125]
          Length = 571

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/399 (35%), Positives = 210/399 (52%), Gaps = 61/399 (15%)

Query: 163 AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 222
           A  + + ++ ++  R  + IK  ++  +  G  ++ SSSGAT FMEPK           L
Sbjct: 178 ASYLQENIVVEKNGRFTIPIKKQYRSKV-SGTVIDTSSSGATVFMEPKEVGALYEQLDDL 236

Query: 223 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
             +E  E   IL  LTA +   E+E+   MD +   D+ FA+A + + +DGV P L+   
Sbjct: 237 LAAESYEVETILYTLTASVLAIEKELHLAMDIMHHYDVLFAKAKYGRSIDGVIPALND-- 294

Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
               D +I+++  +HPLL                                     +  VP
Sbjct: 295 ----DYTIHLDDARHPLL------------------------------------GEQAVP 314

Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
           + +K+    R ++ITGPNTGGKT ++KT+GL +LM++ GL +PA     L  F  +  DI
Sbjct: 315 LSLKLGIRERALIITGPNTGGKTVTLKTVGLLTLMAQTGLMIPAGPKTSLHVFQKLFVDI 374

Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
           GD QS+EQNLSTFS  ++ I+ ILE    ++LVL+DE+GSGTDP+EG+ALA  +L+ L  
Sbjct: 375 GDGQSIEQNLSTFSSRLTNIIHILERADDQTLVLVDELGSGTDPNEGMALAQVLLEQLFA 434

Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
           +    + TTHY +L  L      F N + EF + TL+PTYR+L G TG+S A +IA ++G
Sbjct: 435 KGATILATTHYRELKSLSKTHEGFLNGSMEFDVATLQPTYRLLLGETGNSQAFDIAFTLG 494

Query: 523 FDRKIIQRAQKL------------------VERLRPERQ 543
              ++I RAQ+L                   +RLR ERQ
Sbjct: 495 LHPELIHRAQQLTGDQLGESRYTTTKDLDSTQRLRYERQ 533


>gi|162661179|gb|EDQ48693.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 866

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 196/621 (31%), Positives = 309/621 (49%), Gaps = 71/621 (11%)

Query: 98  PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSL 152
           PLLE + +N +    LE+ I  CID +   +LD AS  L  +R E +    R  E LDS+
Sbjct: 307 PLLEGISENLSEQKALEDAIKACID-ESAEVLDSASPGLAQVRRELRSGEVRIREKLDSM 365

Query: 153 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
           ++  +     A  +   LIT R  R  + +KA ++     GI  + S SGAT F+EP+  
Sbjct: 366 IRSSSV----AKMLQDQLITIRGDRFVIPVKAEYRSYF-GGIVHDQSGSGATLFIEPESI 420

Query: 213 VEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 269
           V  NN   +L  + + EE     IL  LTA + +    +   +D + ++D  FA+   A 
Sbjct: 421 VAMNN---KLRETRMKEEREIEIILQKLTALVGEQADLLLLDIDLLGQLDFIFAKGRLAH 477

Query: 270 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
            M    P ++ + ++           +HPL+                    D+E      
Sbjct: 478 VMKASQPRMNDRGYLKLKKG------RHPLI--------------------DMEKV---- 507

Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
                      VPID+++      +++TGPNTGGKT ++KT+GL SLM+ +GL++PA+  
Sbjct: 508 -----------VPIDVELGNSYSSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFVPAEEG 556

Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 449
            +L  FD I ADIGD QS+EQ+LSTFS H++ I+ IL  ++ +SLVL+DE+G+GTDP+EG
Sbjct: 557 SQLCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRILNHMTPKSLVLLDEVGAGTDPAEG 616

Query: 450 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
            ALA SIL+++       V TTHY++L     +     NA+ EF + TL PTYR+L G  
Sbjct: 617 SALAISILEHIHSLGCRMVATTHYSELKAYAYERKGVINASMEFDVNTLSPTYRLLVGVP 676

Query: 510 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 569
           G SNA  IA+ +G  + I+  A+  V     + +  R   +  SL E R   ES+   A 
Sbjct: 677 GRSNAFAIAERLGLPQVILDYARGEV-----KEEDQRVEHMIASLEENRLGAESEREKAE 731

Query: 570 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 629
            L  E+  L    + E + L+ +   L  K   + ++ +  A+ + + ++ D    LR  
Sbjct: 732 KLRQEMEQLRSRHQQELEKLEEQRDRLIEKARGEAKEVIAKARREAEQIIAD----LRQL 787

Query: 630 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLAT 687
           + +E  S+ +    A    ++   P      +    +    Q   G++V V SL  K   
Sbjct: 788 AKEEGASVKEHKLIAARRQLDEAEPQQRKKGAAKPKAKAPRQIEPGDEVMVYSLNQK-GH 846

Query: 688 VVEVPGDDDTVLVQYGKMRVR 708
           VVE+ G  + V VQ G M+++
Sbjct: 847 VVELSGAKEAV-VQLGIMKMK 866


>gi|399888238|ref|ZP_10774115.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium arbusti SL206]
          Length = 788

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 188/593 (31%), Positives = 303/593 (51%), Gaps = 61/593 (10%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           I DRAS +L  IR   +    ++ S +  +      +  + + + T R  R  + +KA +
Sbjct: 145 ISDRASTELFNIRKSLRDKTASVKSKVNSLVRSY--SNFLQENIYTIRGDRYVIPVKAEY 202

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           K  +P G+  + SSSGAT F+EP G V  NN    +   E AE   IL  L+ +I ++  
Sbjct: 203 KAQVP-GLVHDQSSSGATLFIEPMGLVNLNNEIKEIMLKEKAEINRILQELSQKIYENIV 261

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
            ++     V E+D  FA+A +A  ++ + P       V+ +  I+I   +HPL+      
Sbjct: 262 VVENNASIVYELDFIFAKAKYASEINAIRP------GVNDNGIIDIVQGRHPLI------ 309

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                    +P K                     V +D+ +  E   +++TGPNTGGKT 
Sbjct: 310 ---------DPEKV--------------------VAMDVYLGREFTSLIVTGPNTGGKTV 340

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           ++KT+GL  LM+ +G+ +PA+ +  + +F  + ADIGD QS+EQ+LSTFS H++ IV+I+
Sbjct: 341 TLKTVGLLELMAMSGILIPARENSTVSFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIM 400

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
                 SLVL DE+G+GTDP+EG ALA SIL+ LR+R    V TTHY++L     K    
Sbjct: 401 GKADLTSLVLFDELGAGTDPTEGAALAVSILENLRERKTKLVATTHYSELKAYALKTEGV 460

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQ 544
           ENA+ EF +ETLRPTYR+L G  G SNA  I+K +G    II  A+K +  + L+ E   
Sbjct: 461 ENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDEARKGISSDTLKFE--- 517

Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD---RRAAHLKAKET 601
               +L QSL E+  K E  AR +  L  E   +  + E++   L+    +A     KE 
Sbjct: 518 ----DLIQSLQEKSIKAEENARKSEMLKIEAEKIKEKYEEKLYSLNSSREKALSEGRKEA 573

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
           + +  E   AK + D ++++     R   + E  + +++    +   ++ +  ++ +  S
Sbjct: 574 KGIIAE---AKEEADEILKNIRELERMGYSSETRAKLEKERRRLKESLD-NVEENMYKDS 629

Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
                  + + GE+V++ SL  K   V+  P +   V +Q G M++ VK  N+
Sbjct: 630 SKENGLTSVKEGEEVYIPSLNMK-GIVLSQPDNRGEVQIQAGIMKINVKLKNL 681


>gi|429766463|ref|ZP_19298727.1| MutS domain V protein [Clostridium celatum DSM 1785]
 gi|429184454|gb|EKY25470.1| MutS domain V protein [Clostridium celatum DSM 1785]
          Length = 628

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 167/542 (30%), Positives = 276/542 (50%), Gaps = 66/542 (12%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQL 59
           +G A++ K + P   +L+   + L++TS    ++  S  + L  I ++   +     G  
Sbjct: 26  LGKALIDKLE-P-SNNLKIVNRRLDETSEGRRLLDASYHIPLVGIFNVVPYIEKIEKGAS 83

Query: 60  LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
           L P ++  +   LR    V K   +  E    +L  Y       ++   L+ +EE+I  C
Sbjct: 84  LDPEDLAIMSDFLRGCRKV-KLFIKDKEGYAPTLSSYG------ESITDLSYIEEEINRC 136

Query: 120 IDCKLLIILDRASEDLELIR-----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
           I     I+   AS++L+ IR      E K   E LD  LK    + +    I +  I+KR
Sbjct: 137 IRGS--IVDSNASKELKKIRRLIDDCENKIK-EKLDKFLKNSENKQY----IQEFFISKR 189

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             +  + IK+S+K  +  G  +  SS G T FMEP    +  +    L   E  EE  IL
Sbjct: 190 NGKYTIPIKSSYKNYV-QGTIVESSSKGTTVFMEPTTISKHTSELAILKVEESMEEYKIL 248

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
            +LT  + +  REIK  ++ + E D+ +A+A ++  ++G+ P L+   ++       ++G
Sbjct: 249 GMLTEMLNEKIREIKINIEVIAEYDMIWAKAKYSNDINGIKPKLNEYGYIKI-----VDG 303

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
            K+PLL                                       PVP++ ++  + R +
Sbjct: 304 -KYPLLKN-------------------------------------PVPLNFEIGNDYRAL 325

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
           +ITGPN GGKT  +KT+G+ +L +++G ++PAK    +  F+ I  DIGD+QS+E  LST
Sbjct: 326 IITGPNAGGKTVVLKTVGILTLATQSGFHIPAKEGTEISVFNKIFVDIGDNQSIENALST 385

Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
           FS H+  + DI++  S+ +L+L DEIGSGT+P+EG ALA +IL+ L  +  + + TTHY 
Sbjct: 386 FSSHVKNLADIIKQSSKSTLLLFDEIGSGTEPNEGAALAIAILEELYHKGCITIATTHYG 445

Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
           ++    ++   FENAA EF  +TL P Y++  G +GDSNAL I+K +G    II++ +K 
Sbjct: 446 EIKNFSEEHPHFENAAMEFKKDTLEPLYKLHIGRSGDSNALYISKRMGISDSIIEKTKKY 505

Query: 535 VE 536
           +E
Sbjct: 506 IE 507


>gi|289578704|ref|YP_003477331.1| MutS2 family protein [Thermoanaerobacter italicus Ab9]
 gi|289528417|gb|ADD02769.1| MutS2 family protein [Thermoanaerobacter italicus Ab9]
          Length = 791

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/370 (37%), Positives = 208/370 (56%), Gaps = 42/370 (11%)

Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
           + +P+IT R+ R  V +K  ++     GI  + SSSGAT F+EP   V+ NN   ++   
Sbjct: 185 LQEPIITVRQGRYVVPVKQEYRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELK 243

Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
           E  E   IL  L+ E+ K  + +   ++ V E+D  FA+A ++  +  V P L++  +  
Sbjct: 244 ERQEIQRILFELSQEVKKYAQALFNDIEIVSELDFTFAKAKYSLKLKAVRPELNTMGY-- 301

Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
               IN++  +HPL+                       N E  V            PIDI
Sbjct: 302 ----INLKKARHPLI-----------------------NQEAVV------------PIDI 322

Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
            +  +   +VITGPNTGGKT ++KT+GL ++M+ AGL +PA+   ++  F+ I  DIGD 
Sbjct: 323 YIGDQFNTLVITGPNTGGKTVTLKTVGLLTIMAMAGLNIPAEEGSQVSIFEEIFVDIGDE 382

Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
           QS+EQ+LSTFS H++ I+ +L+ V++  L L+DE+G+GTDP EG ALA SIL  L     
Sbjct: 383 QSIEQSLSTFSSHMTNIISMLQKVNKNCLALLDELGAGTDPVEGAALAMSILDTLHKIGA 442

Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
             + TTHY++L     K    ENA+ EF +ETL+PTY+++ G  G SNA  IAK +G  R
Sbjct: 443 KTIATTHYSELKQYALKTAGVENASVEFDVETLKPTYKLIIGLPGKSNAFEIAKRLGLPR 502

Query: 526 KIIQRAQKLV 535
           +II+ A+K +
Sbjct: 503 QIIEDARKYI 512


>gi|406026859|ref|YP_006725691.1| DNA mismatch repair protein MutS [Lactobacillus buchneri CD034]
 gi|405125348|gb|AFS00109.1| DNA mismatch repair protein MutS [Lactobacillus buchneri CD034]
          Length = 788

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 181/576 (31%), Positives = 279/576 (48%), Gaps = 58/576 (10%)

Query: 50  ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
           I N+++SG  LS   I  + R ++ V   ++ L  A E+   +L+    +++ L     +
Sbjct: 80  IENASLSGTELS--HITKLLRAVQVVTEFFRGLA-AEEV---TLKSVPSIVDRL---TLM 130

Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
            E+ +++   +D    I LD AS  L  IR        N+ S + K   +   A  + +P
Sbjct: 131 PEVTKRMVASVDEDGRI-LDGASSQLRSIRRTIAATQSNIRSKMGKFI-KGSDAKYLSEP 188

Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
           +IT R  R  + IKA +K     GI  + S+SG T ++EP   VE NN   R   +E AE
Sbjct: 189 IITVRDGRFVLPIKAEYKQRF-GGIIHDQSASGQTLYVEPNNVVEMNNQLRRDQLAERAE 247

Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
              IL+ LT  I     E+   MD V ++D   A+A FA     V P       VS  + 
Sbjct: 248 VRRILAELTNLIRPHRDELLANMDLVGQLDFVNAKAKFAHATGSVMP------KVSPKNV 301

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
           IN+   +HPL+                P    V N                   DI++  
Sbjct: 302 INLRKARHPLI----------------PRDQVVAN-------------------DIELGD 326

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
           +   +++TGPNTGGKT ++KT+GL  LM ++GL++ A    ++  FD + ADIGD QS+E
Sbjct: 327 QYNTIIVTGPNTGGKTITIKTVGLLQLMGQSGLFITANEDSQIGVFDNVFADIGDEQSIE 386

Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
            NLSTFS H+  I+ IL+  S++SLVL+DE+G+GTDP EG ALA +I+       G  + 
Sbjct: 387 ANLSTFSSHMDNIISILKQTSKDSLVLLDELGAGTDPKEGAALAMAIIDAFHQIGGELIA 446

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTHY +L           NA+ EF +ETL+PTYR L G  G SNALNIA  +G    II 
Sbjct: 447 TTHYPELKAFAYNRQGIINASMEFDVETLQPTYRFLLGIPGQSNALNIASKLGMPEAIID 506

Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
           +A+        + +    + + + L  + ++   +A        E   L  +++D+    
Sbjct: 507 QARAFT-----DSENQDINNMIEELTAQTKRAHDEADELDQQLKESTRLQHDLQDKFTKY 561

Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
           + +   L  +  QQ  Q +  AK + D ++ D   +
Sbjct: 562 ESQKERLVEQAKQQANQVVEEAKKKADRIIDDLHQK 597


>gi|336420684|ref|ZP_08600846.1| hypothetical protein HMPREF0993_00223 [Lachnospiraceae bacterium
           5_1_57FAA]
 gi|336005916|gb|EGN35959.1| hypothetical protein HMPREF0993_00223 [Lachnospiraceae bacterium
           5_1_57FAA]
          Length = 791

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 176/555 (31%), Positives = 273/555 (49%), Gaps = 61/555 (10%)

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           P+IT R  R C+ +K+ ++  +  G+  + SS+G+T F+EP   V+ NN    L   E  
Sbjct: 186 PIITMRGDRYCIPVKSEYRSQV-QGLIHDQSSTGSTLFIEPMSVVKLNNDLKELYGKEQE 244

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ L+ ++A+    I+     + E+D  FAR   A  M+   P+ ++      D 
Sbjct: 245 EIQVILARLSVDVAEYIDAIRTDYSVLTELDFIFARGILALDMNASMPLFNT------DG 298

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
            I I   +HPLL    +                                   VPI + + 
Sbjct: 299 RIYIREGRHPLLDKKKV-----------------------------------VPITVMLG 323

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
               +++ITGPNTGGKT S+KT+GL +LM +AGL++PA +   L  F  + ADIGD QS+
Sbjct: 324 DAFDLLIITGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELAVFHDVYADIGDEQSI 383

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQ+LSTFS H++ IV  L+ V   SLVL DE+G+GTDP+EG ALA +IL +L  R    +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKQVDERSLVLFDELGAGTDPTEGAALAIAILNHLHGRGIRTM 443

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L          ENA  EF LETLRPTY +L G  G SNA  IA  +G    II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDLETLRPTYHLLIGIPGKSNAFAIAGKLGLPDYII 503

Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
           + A     R     Q     +L   L   +R ++ +    A+   E+  L  E +++ + 
Sbjct: 504 EEA-----RTHLTEQDESFEDLLTDLETSKRTIQKEQEEIAAYRRELERLKAETKEKQER 558

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINS----LIKESES 643
           L+ +   +  +  ++    L  AK   D  +++F    +++ SA E+      L K+ ++
Sbjct: 559 LEAQRERILREANEKAHSILADAKETADETMRNFRKFGKESISAAEMEKERERLRKKMDA 618

Query: 644 AIAAI-VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
           A + + +E  +P       +     F  + GE V V S+ +   TV  +P     V VQ 
Sbjct: 619 ARSGMKMEPQKPR-----KQHKPGDF--KLGESVKVLSM-NLTGTVTALPDSKGNVTVQM 670

Query: 703 GKMRVRVKKNNIRPI 717
           G +R +V  +++  I
Sbjct: 671 GILRSQVNISDLEII 685


>gi|297544938|ref|YP_003677240.1| MutS2 family protein [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
 gi|296842713|gb|ADH61229.1| MutS2 family protein [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
          Length = 791

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 147/412 (35%), Positives = 224/412 (54%), Gaps = 51/412 (12%)

Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
           + +P+IT R+ R  V +K  ++     GI  + SSSGAT F+EP   V+ NN   ++   
Sbjct: 185 LQEPIITVRQGRYVVPVKQEYRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELK 243

Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
           E  E   IL  L+ E+ K  + +   ++ V E+D  FA+A ++  +  V P L++  +  
Sbjct: 244 ERQEIQRILFELSQEVKKYAQALFNDIEIVSELDFTFAKAKYSLKLKAVRPELNTMGY-- 301

Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
               IN++  +HPL+                       N E  V            PIDI
Sbjct: 302 ----INLKKARHPLI-----------------------NQEAVV------------PIDI 322

Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
            +  +   +VITGPNTGGKT ++KT+GL ++M+ AGL +PA+   ++  F+ I  DIGD 
Sbjct: 323 YIGDQFNTLVITGPNTGGKTVTLKTVGLLTIMAMAGLNIPAEEGSQVSIFEEIFVDIGDE 382

Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
           QS+EQ+LSTFS H++ I+ +L+ V++  L L+DE+G+GTDP EG ALA SIL  L     
Sbjct: 383 QSIEQSLSTFSSHMTNIISMLQKVNKNCLALLDELGAGTDPVEGAALAMSILDTLHKIGA 442

Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
             + TTHY++L     K    ENA+ EF +ETL+PTY+++ G  G SNA  IAK +G  R
Sbjct: 443 KTIATTHYSELKQYALKTAGVENASVEFDVETLKPTYKLIIGLPGKSNAFEIAKRLGLPR 502

Query: 526 KIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
           +II+ A+K +  E L+ E       ++   +  +RR+LE      A L   +
Sbjct: 503 QIIEDARKYISGEALKFE-------DIIADVENKRRELEKANHEVAFLRKNV 547


>gi|257867419|ref|ZP_05647072.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC30]
 gi|257873749|ref|ZP_05653402.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC10]
 gi|257801475|gb|EEV30405.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC30]
 gi|257807913|gb|EEV36735.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC10]
          Length = 787

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 174/512 (33%), Positives = 259/512 (50%), Gaps = 80/512 (15%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS  L  IR   +R      E LD +++   A+      +   ++T R  R  + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 239
           K  ++ +   G+  + SSSG T F+EPK  VE NN   RL   +IAE    T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILAELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+A  +REI +    +  +D   A+A F + M  + P ++  +HV F  +      +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  E + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKEYQAVVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  +M +AGL + A+   ++  F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGVFNEIFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           + IV++L+ V   SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TTIVEVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
               +   NA+ EF ++TL PTYR+L G  G SNA  I+K +G    II +A++++    
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPDTIIDQAKEIM---- 511

Query: 540 PERQQHRKSELYQSLMEERRKL--------ESQARTAASLHAEIMDLYRE-IEDEAKDLD 590
            + +    +E+   L E RRK+            + AA LH E+   Y    E+  K+L 
Sbjct: 512 -DGESQDLNEMIADL-ENRRKMTETEYLEVRHHVKEAARLHQELEAAYSYFFEEREKEL- 568

Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
                  AK  Q+  Q +  AK + + ++ D 
Sbjct: 569 -------AKARQKANQIVEEAKEESEKIIADI 593


>gi|395242283|ref|ZP_10419281.1| MutS domain V [Lactobacillus pasteurii CRBIP 24.76]
 gi|394480379|emb|CCI85521.1| MutS domain V [Lactobacillus pasteurii CRBIP 24.76]
          Length = 627

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 169/523 (32%), Positives = 268/523 (51%), Gaps = 64/523 (12%)

Query: 21  QKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           ++LL +T  A+A++++ Q +     E I  IL  A  G LLS  E+  V   LR V  + 
Sbjct: 40  EQLLIETQQAIAVIETGQHMPFVDSEAIDPILLKAQKGLLLSADELEKVADYLR-VMTLL 98

Query: 80  KKLTEAAELDGDSLQRY-SPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
           K+  +  E +   L  Y   L+EL K       LEE I   I+    I+ DRA  DL  +
Sbjct: 99  KRFFKRLESEAPLLSSYVQSLIELPK-------LEEAIYDSIEHG--IVADRADRDLARL 149

Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
           R +  ++   +   L            I  PLI ++   + + +KA++K  L +G  +  
Sbjct: 150 RKQLTQDQTAIREGLNHFLTNKKYKTMIQDPLIVEKNGVLTIPMKANYKNQL-NGQIVAS 208

Query: 199 SSSGATYFMEPKGAVEFN----NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
           SS G T + +P   V  N     ++++++N E A    IL  LTA++ ++ R+I   +  
Sbjct: 209 SSGGKTVYWQPSKMVNLNAEIATLKMQITNIEYA----ILGALTAQVFENSRDINENIAA 264

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
           +  ID   ARA ++Q  DG  P+L+ ++      S+ +  ++HPLL+             
Sbjct: 265 ITAIDEIMARARYSQSYDGKKPVLNHEN------SLELNAVRHPLLVN------------ 306

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
                                    PVP+ +K++ E  V++ITGPN GGKT ++KT+GL 
Sbjct: 307 -------------------------PVPLTVKLDQERAVLMITGPNAGGKTVALKTIGLM 341

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
            LM++ GL+LP++   ++P  D +   IGDHQS++ +LSTFS  + +I DI+   +  SL
Sbjct: 342 VLMTELGLFLPSQKPCKIPVMDQVCTLIGDHQSIDNSLSTFSAEMKQIADIISGATARSL 401

Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
           +L+DE+G+GTDP+EG A+A  +LQ L  R  L V TTHY+ +     K   F  A  +F 
Sbjct: 402 ILLDELGTGTDPNEGSAIAIGVLQELYLRGCLIVATTHYSAIKDFALKHEAFMTAEMDFD 461

Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
             TL PTYR++    GDS AL IAK +G   +++  A+  +ER
Sbjct: 462 PATLSPTYRLILNRVGDSRALWIAKKVGLSDRVLHLAENYLER 504


>gi|303228407|ref|ZP_07315240.1| putative recombination and DNA strand exchange inhibitor protein
           [Veillonella atypica ACS-134-V-Col7a]
 gi|302516909|gb|EFL58818.1| putative recombination and DNA strand exchange inhibitor protein
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 792

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 209/749 (27%), Positives = 356/749 (47%), Gaps = 100/749 (13%)

Query: 18  EESQKLLNQTSAALAMMQS---QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           E+ Q+ L++T+ AL   Q+   QPL      DI      +    +LS   I  V  T+ A
Sbjct: 39  EKIQEALDETAEALRSWQTEIEQPL--GGTRDIRESCKKSRKDFVLSREAIWDVYITIGA 96

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
               +K++   A+        Y PLL L +++   +  +E+++    D K  + LD AS 
Sbjct: 97  ----YKRM---AKFFRAKYMEY-PLLSLWMQDMPNMDRVEQRLKRVFDEKGEL-LDTASP 147

Query: 134 DLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
            L  +R      R R   ++ ++L     Q +      + +IT+R +R  + +K  ++  
Sbjct: 148 KLASLRNTISKTRDRIKHDIQAILHDKDNQKY----FQEAIITQRNNRYVIPVKQEYRQY 203

Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAKSER 246
             DG+  + S++G T ++EP   V+ NN    L  + I EE  +L +   L+A I +   
Sbjct: 204 F-DGLIHDRSATGQTLYIEPMRLVQLNN---DLQEALIGEEQEVLRIYKELSALIKQHSN 259

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           ++    ++V  I+  + +A  A     V      Q+ +S    +N+   +HPL+  +++ 
Sbjct: 260 DLMDACEKVSHIEFVYGKAKLAIAQKAV------QATLSEGRDVNLMRARHPLIPANTV- 312

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                                             VP DI++  + R+++ITG NTGGKT 
Sbjct: 313 ----------------------------------VPTDIRLGTDYRILLITGSNTGGKTV 338

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           S+KTLGL SLM+++GL++PA +   LP F  I ADIGD QS+E +LSTFS H+++++ I+
Sbjct: 339 SLKTLGLLSLMNQSGLFIPADHGSILPIFHNIFADIGDEQSIEASLSTFSAHMTQVISII 398

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           +      LVL+DE+GSGTDP EG ALA SIL++ R +  L +V+THY +L          
Sbjct: 399 KHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRQKGTLMMVSTHYNELKNYAYHTAGI 458

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
           EN   EF   TL+PTYR+  G  G S+AL+IA  +G  + I+ RA       R  + +  
Sbjct: 459 ENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVNRA-------RDYKSKFG 511

Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYR---EIEDEAKDLDRRAAHLKAKETQQ 603
            SE+   L +   +L   +    +L  E+ +  R   ++E E K  + +   + AK    
Sbjct: 512 SSEMENVLTDLNEQLRKSSERERALKKELDETRRMRGQLEREKKQFNEKRKQMLAKAQAD 571

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
            +      +V+ + +++  + Q  + + D+  S I  +   I+ +   H P+   +    
Sbjct: 572 AESMKRSLRVEGEAIIKQLKAQFSETNKDKRLSAINAARKGISNV---HVPEAPVNDDRK 628

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV-------------- 709
             S      G+ V+V SL   L TV+ + G+  TV +      V+V              
Sbjct: 629 TLSIDAVAIGQVVYVTSL-RSLGTVLSIKGNRVTVDINGLSATVKVNELQSTTREESNKI 687

Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQVCT 738
           +++N++  P + RK A   A + +K+V T
Sbjct: 688 QRDNLKAQPKT-RKRAGGSAVQRQKEVRT 715


>gi|167760788|ref|ZP_02432915.1| hypothetical protein CLOSCI_03173 [Clostridium scindens ATCC 35704]
 gi|167661675|gb|EDS05805.1| MutS2 family protein [Clostridium scindens ATCC 35704]
          Length = 791

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 176/555 (31%), Positives = 273/555 (49%), Gaps = 61/555 (10%)

Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
           P+IT R  R C+ +K+ ++  +  G+  + SS+G+T F+EP   V+ NN    L   E  
Sbjct: 186 PIITMRGDRYCIPVKSEYRSQV-QGLIHDQSSTGSTLFIEPMSVVKLNNDLKELYGKEQE 244

Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
           E   IL+ L+ ++A+    I+     + E+D  FAR   A  M+   P+ ++      D 
Sbjct: 245 EIQVILARLSVDVAEYIDAIRTDYSVLTELDFIFARGILALDMNASMPLFNT------DG 298

Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
            I I   +HPLL    +                                   VPI + + 
Sbjct: 299 RIYIREGRHPLLDKKKV-----------------------------------VPITVMLG 323

Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
               +++ITGPNTGGKT S+KT+GL +LM +AGL++PA +   L  F  + ADIGD QS+
Sbjct: 324 DAFDLLIITGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELAVFHDVYADIGDEQSI 383

Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
           EQ+LSTFS H++ IV  L+ V   SLVL DE+G+GTDP+EG ALA +IL +L  R    +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKQVDERSLVLFDELGAGTDPTEGAALAIAILNHLHGRGIRTM 443

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY++L          ENA  EF LETLRPTY +L G  G SNA  IA  +G    II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDLETLRPTYHLLIGIPGKSNAFAIAGKLGLPDYII 503

Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
           + A     R     Q     +L   L   +R ++ +    A+   E+  L  E +++ + 
Sbjct: 504 EEA-----RTHLTEQDESFEDLLTDLETSKRTIQKEQEEIAAYRRELERLKAETKEKQER 558

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINS----LIKESES 643
           L+ +   +  +  ++    L  AK   D  +++F    +++ SA E+      L K+ ++
Sbjct: 559 LEAQRERILREANEKAHSILADAKETADETMRNFRKFGKESISAAEMEKERERLRKKMDA 618

Query: 644 AIAAI-VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
           A + + +E  +P       +     F  + GE V V S+ +   TV  +P     V VQ 
Sbjct: 619 ARSGMKMEPQKPR-----KQHKPGDF--KLGESVKVLSM-NLTGTVTALPDSKGNVTVQM 670

Query: 703 GKMRVRVKKNNIRPI 717
           G +R +V  +++  I
Sbjct: 671 GILRSQVNISDLEII 685


>gi|335356987|ref|ZP_08548857.1| DNA mismatch repair protein [Lactobacillus animalis KCTC 3501]
          Length = 786

 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 207/661 (31%), Positives = 320/661 (48%), Gaps = 105/661 (15%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L+  E+  + + LR+ N V +     A    D     + L EL +    L +L +++
Sbjct: 81  GATLNGKELAEISQVLRSANEVHRFFMALA----DEKVELNYLYELEEQLETLPQLAKRL 136

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----IT 172
              ++    +  D +S    L+R+ R++      ++  ++ A     G   K L    +T
Sbjct: 137 QVSLEADGYVTDDASS----LLRSLRRQISTTEATIRNRLVA--LTRGNNAKYLSGANVT 190

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
            R  R  + ++A HK     GI  + SSSG TYF+EP+  VE NN   RL   ++AE+  
Sbjct: 191 IRNDRYVIPVRAEHKGKF-GGIVHDQSSSGQTYFIEPREIVELNN---RLKQEQVAEKEE 246

Query: 233 ILSLL---TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
           IL +L   + E      E+ +    + E D   A+A +A+ +    P+LS Q        
Sbjct: 247 ILRILRELSEETMPYTAELAHDAKILGEFDFINAKAKYAKELKATQPLLSEQK------D 300

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
           I +  + HPLL                         EM          D  V  DI +  
Sbjct: 301 IYLRQVWHPLL-------------------------EM----------DKAVKNDIILGK 325

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
           + + +VITGPNTGGKT ++KTLGL  +M ++GL++PA  + R+  F  I ADIGD QS+E
Sbjct: 326 DYQAMVITGPNTGGKTITLKTLGLVQMMGQSGLFIPAFENSRIGVFKDIFADIGDEQSIE 385

Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
           Q+LSTFS H++ IV+ILE V ++SLVL DE+G+GTDP EG ALA +IL  +       + 
Sbjct: 386 QSLSTFSSHMTNIVNILEHVDQDSLVLFDELGAGTDPQEGAALAIAILDAIGASGAYVLA 445

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTHY +L     + T+  NA+ EF+ ETLRPTYR+L G  G SNA NI++ +G  + I+ 
Sbjct: 446 TTHYPELKTYGFERTQTINASMEFNEETLRPTYRLLIGIPGQSNAFNISERLGLSQTIVA 505

Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART-------AASLHAEIMDLYREI 582
            A+ LV      +     + +   L+ +RR+ E +A +       A  LH ++   Y   
Sbjct: 506 AARNLV-----AKDSQDLNNMIADLVAKRRQAEEEAISLQANLDEAQKLHHDLATAYERF 560

Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF------------ENQLRDAS 630
            +E + +  +A   K K  + V+Q    AK + D ++ +             EN+L DA 
Sbjct: 561 VNEREQMQDQA---KQKANEIVEQ----AKQKADEIIGELRALKQNAATEIKENELIDAK 613

Query: 631 ADEINSLIKESESAI--------AAIVEAHRPDDDFSVSETNTSSFTPQ-FGEQVHVKSL 681
           A ++N+L  E + A+        A   +A +P+DD  V+         Q  GE V    L
Sbjct: 614 A-QLNAL--EQKRALKKNKVLKRAKRKQAFKPNDDVMVTSYGQRGVLVQKVGEHVWEVQL 670

Query: 682 G 682
           G
Sbjct: 671 G 671


>gi|429204941|ref|ZP_19196222.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
 gi|428146803|gb|EKW99038.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
          Length = 786

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 181/580 (31%), Positives = 286/580 (49%), Gaps = 102/580 (17%)

Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
           ++T R  R  + ++  ++     G+  + S+SG T F+EPK  VE NN   R  ++E  E
Sbjct: 188 IVTIRNDRYVIPVRQEYRNKF-GGVVHDQSASGQTVFVEPKAIVELNNRLKRQQSAEREE 246

Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
              IL+ L+A IA    E++     + ++D   A+A +A  +    PI+ +      D++
Sbjct: 247 VKRILAELSALIAPYTEELQANAHIIGQLDFVNAKARYAHAIKATEPIIDT------DNN 300

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
           + +  + HPLL+               P K+ V N                   DI +  
Sbjct: 301 VYLRQVWHPLLV---------------PQKA-VRN-------------------DIMLGK 325

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
           + + ++ITGPNTGGKT ++KTLGL  +M ++GL++PA    R+  F  I ADIGD QS+E
Sbjct: 326 DYQAIIITGPNTGGKTITLKTLGLVQMMGQSGLFIPAYEESRIGIFTDIFADIGDEQSIE 385

Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
           QNLSTFS H+  IV+IL+ +   SLVL DE+G+GTDP EG +LA +IL  +       V 
Sbjct: 386 QNLSTFSSHMVNIVNILQHIDAHSLVLFDELGAGTDPQEGASLAIAILDAVGATGAYVVA 445

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTHY +L     +     NA+ EF +ETL+PTYR+L G  G SNA NI++ +G D  II 
Sbjct: 446 TTHYPELKAYGFERPGTINASMEFDVETLQPTYRLLLGIPGRSNAFNISRRLGLDETIIA 505

Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASLHAEIMDLYREI 582
            AQ+L       +     + +   L+ +R + E +A         A  LH ++   Y ++
Sbjct: 506 AAQELT-----TQDSQDLNAMITDLVAKRHQAEEEAIALQKHLEEAEKLHHDLAQAYEKL 560

Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF------------ENQLRDAS 630
             E   L  +A  +KA +  QV Q+      + D ++ D             ENQL DA 
Sbjct: 561 VAERSHLTEQAK-MKANDIVQVAQK------KADAIINDLRAMRLNGAATVKENQLIDAQ 613

Query: 631 ADEINSL---IKESESAI---AAIVEAHRPDDDFSVSETNTSSFTPQFGEQ-VHVKSLGD 683
             ++NSL   I+   + +   A   +A  P+DD  V           +G+Q V ++ LGD
Sbjct: 614 T-QLNSLHQDIRLQHNKVLRKAKEKQALHPNDDVLVRS---------YGQQGVLIQKLGD 663

Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           K               VQ G +++++ ++++  I   ++K
Sbjct: 664 KQWE------------VQLGILKMKIDEDDLEKIHVQEKK 691


>gi|331701294|ref|YP_004398253.1| MutS2 protein [Lactobacillus buchneri NRRL B-30929]
 gi|329128637|gb|AEB73190.1| MutS2 protein [Lactobacillus buchneri NRRL B-30929]
          Length = 788

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 181/576 (31%), Positives = 279/576 (48%), Gaps = 58/576 (10%)

Query: 50  ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
           I N+++SG  LS   I  + R ++ V   ++ L  A E+   +L+    +++ L     +
Sbjct: 80  IENASLSGTELS--HITKLLRAVQVVTEFFRGLA-AEEV---TLKSVPSIVDRL---TLM 130

Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
            E+ +++   +D    I LD AS  L  IR        N+ S + K   +   A  + +P
Sbjct: 131 PEVTKRMVASVDEDGRI-LDGASSQLRSIRRTIAATQSNIRSKMGKFI-KGSDAKYLSEP 188

Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
           +IT R  R  + IKA +K     GI  + S+SG T ++EP   VE NN   R   +E AE
Sbjct: 189 IITVRDGRFVLPIKAEYKQRF-GGIIHDQSASGQTLYVEPNNVVEMNNQLRRDQLAERAE 247

Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
              IL+ LT  I     E+   MD V ++D   A+A FA     V P       VS  + 
Sbjct: 248 VRRILAELTNLIRPHRDELLANMDLVGQLDFVNAKAKFAHATGSVMP------KVSPKNV 301

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
           IN+   +HPL+                P    V N                   DI++  
Sbjct: 302 INLRKARHPLI----------------PRDQVVAN-------------------DIELGD 326

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
           +   +++TGPNTGGKT ++KT+GL  LM ++GL++ A    ++  FD + ADIGD QS+E
Sbjct: 327 QYNTIIVTGPNTGGKTITIKTVGLLQLMGQSGLFITANEDSQIGVFDNVFADIGDEQSIE 386

Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
            NLSTFS H+  I+ IL+  S++SLVL+DE+G+GTDP EG ALA +I+       G  + 
Sbjct: 387 ANLSTFSSHMDNIISILKQTSKDSLVLLDELGAGTDPKEGAALAMAIIDAFHQIGGELIA 446

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTHY +L           NA+ EF +ETL+PTYR L G  G SNALNIA  +G    II 
Sbjct: 447 TTHYPELKAFAYNRQGIINASMEFDVETLQPTYRFLLGIPGQSNALNIASKLGMPAAIID 506

Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
           +A+        + +    + + + L  + ++   +A        E   L  +++D+    
Sbjct: 507 QARAFT-----DSENQDINNMIEELTAQTKRAHDEADELDQQLKESTRLQHDLQDKFTKY 561

Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
           + +   L  +  QQ  Q +  AK + D ++ D   +
Sbjct: 562 ESQKERLVEQAKQQANQVVEEAKKKADRIIDDLHQK 597


>gi|336394748|ref|ZP_08576147.1| mutS family ATPase [Lactobacillus farciminis KCTC 3681]
          Length = 784

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 148/413 (35%), Positives = 217/413 (52%), Gaps = 49/413 (11%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIK 183
           +LD ASEDL+ IR +  R    L+  ++    Q  +      + + L+T R  R  + +K
Sbjct: 146 VLDTASEDLKYIRNQITR----LNDQIRHTMEQYTRGKNTKYLTENLVTLRDDRFVIPVK 201

Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
             +K     G+  + S+SG T ++EP+  V  NN       SE AEE  IL+ L+  +  
Sbjct: 202 TEYKTKFG-GVVHDQSASGQTLYIEPQAVVGMNNQLHEAQVSEKAEEIRILNKLSDLVRP 260

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
              EI    + + + DL  A+A +A+ +    PI+S       D  +++   KHPL+   
Sbjct: 261 QIDEILENNEVLAQFDLINAKAKYAKEIKATEPIISK------DHIVDLHDAKHPLI--- 311

Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
                       +P                    D  V  DIK+    + ++ITGPNTGG
Sbjct: 312 ------------DP--------------------DKVVANDIKMGEGYKTMLITGPNTGG 339

Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
           KT +MKTLGL  LM++AGL++PA     +  FD +  DIGD QS+EQNLSTFS H+  I+
Sbjct: 340 KTITMKTLGLIQLMAQAGLFIPAHEESEIAVFDEVFVDIGDEQSIEQNLSTFSSHMDNII 399

Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
           +I+  VS  SLVLIDE+G+GTDP EG A+A +IL+ L       + TTHY +L       
Sbjct: 400 NIIRKVSEHSLVLIDELGAGTDPQEGAAIAIAILEKLAQSHCFIMATTHYPELKIFAYNT 459

Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
               NA+ EF  ++L+PTYR+L G  G SNA NIA  +G D+ ++ R Q L++
Sbjct: 460 PETINASMEFDEKSLKPTYRLLIGIPGASNAFNIAARLGMDKGVVNRGQALMD 512


>gi|300854687|ref|YP_003779671.1| MutS-like protein [Clostridium ljungdahlii DSM 13528]
 gi|300434802|gb|ADK14569.1| MutS related protein [Clostridium ljungdahlii DSM 13528]
          Length = 637

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 163/523 (31%), Positives = 263/523 (50%), Gaps = 67/523 (12%)

Query: 22  KLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEI---CAVRRTLRAVNN 77
           K LN+TS   A++ +   + L  I +I  I+++   G +L P ++   C   R  R + N
Sbjct: 45  KRLNETSEGRALLDTCSYIPLEGIFNIDNIIDNVEKGMVLEPEDLTTLCNFLRGCRKIKN 104

Query: 78  VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
             K             + Y+P L    N        E+    +  +  ++   AS++L  
Sbjct: 105 FMK-----------DKEFYAPTLSSYGNSITEFTFIEEEI-ELSIRGSLVDSNASKELRK 152

Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDG 193
           IR    R +EN +S ++    +  +       I +  I+KR  R  + IKA++K  +P  
Sbjct: 153 IR----RLIENTESKIQDKLEKFLKNSSNKKYIQEFFISKRNGRYTIPIKAAYKNQVPGN 208

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           I +  SS G+T F+EP    +       L   E  EE  ILS LTA +  + REIK  M+
Sbjct: 209 I-VETSSKGSTIFIEPNNISKSTEELTALKAEESIEEYKILSTLTALVFDNLREIKINME 267

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            + E D+ FA+A +++ ++G+ P ++   +      INI   KHPLL             
Sbjct: 268 VIEEYDMIFAKAKYSKAINGMKPKINDYGY------INIIKGKHPLL------------- 308

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
                K DV                  VP+D KV  + R ++ITGPN GGKT  +KT+G+
Sbjct: 309 -----KGDV------------------VPLDFKVGDDYRTLIITGPNAGGKTVVLKTVGI 345

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
            +L  ++G ++ A     +  F+ I  DIGD QS+E  LSTFS HI  + DI++  ++ +
Sbjct: 346 LTLAVQSGFHISAAEGTEISVFEKIFVDIGDDQSIENALSTFSSHIKNLADIIDNSNKST 405

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           L+L DEIGSGT+P+EG  LA +IL+    +  + V TTHY ++    +    F+NAA +F
Sbjct: 406 LILCDEIGSGTEPNEGAGLAIAILEEFYHKGCITVATTHYGEIKNFSEIHEDFQNAAMQF 465

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
             ETL P Y+++ G +G+SNAL I+K +G    ++++A+  ++
Sbjct: 466 ESETLEPLYKLVIGKSGESNALWISKKMGIKNSVLEKAESYIK 508


>gi|431752400|ref|ZP_19541083.1| MutS2 protein [Enterococcus faecium E2620]
 gi|430613891|gb|ELB50890.1| MutS2 protein [Enterococcus faecium E2620]
          Length = 786

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D  +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511


>gi|431741156|ref|ZP_19530063.1| MutS2 protein [Enterococcus faecium E2039]
 gi|430602267|gb|ELB39845.1| MutS2 protein [Enterococcus faecium E2039]
          Length = 786

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D  +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511


>gi|257897919|ref|ZP_05677572.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
 gi|257835831|gb|EEV60905.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
          Length = 786

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPRISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D  +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511


>gi|425059158|ref|ZP_18462510.1| MutS2 family protein [Enterococcus faecium 504]
 gi|403036397|gb|EJY47747.1| MutS2 family protein [Enterococcus faecium 504]
          Length = 786

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D  +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511


>gi|418069865|ref|ZP_12707142.1| MutS2 family protein [Pediococcus acidilactici MA18/5M]
 gi|357536396|gb|EHJ20427.1| MutS2 family protein [Pediococcus acidilactici MA18/5M]
          Length = 636

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 167/512 (32%), Positives = 256/512 (50%), Gaps = 55/512 (10%)

Query: 26  QTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
           +T  A  +++S Q + L  ++ I  ++N    G +L+P+E+      LR+ N + KK  E
Sbjct: 50  ETKEARIIIESGQYIPLLGLKQINRLMNKIDKGVILTPAELIEFADFLRS-NRMLKKFFE 108

Query: 85  AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
                  +L +YS  L      +  T  E+ I   +D     +LD AS DL   R + K 
Sbjct: 109 KNRYQTPTLYKYSQAL------SKFTTTEDHIYQKVDD--YEVLDDASRDLRKARRQFKT 160

Query: 145 NMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 204
             + +   L K          I   LI +++  + V IKAS+K+ +P G  ++ SS+G T
Sbjct: 161 IKDEIQDKLMKFLRSPKNKPMIQDVLIVEKQGSITVPIKASYKFKVP-GTIVDQSSNGQT 219

Query: 205 YFMEPKGAVEFNNMEVRLSNSEI-AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
            ++E     + N  ++    + I +E   IL+ LT E+++    I   +D V   D+ FA
Sbjct: 220 VYIELDLVAKLNE-KLAFQKAVIESESYQILAELTGELSEQRTSILNAIDAVTMFDIIFA 278

Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
           RA +++  DG+ P ++          INI   +HP L+G+                    
Sbjct: 279 RAKYSREYDGITPQINQAER------INIIQGRHPFLVGT-------------------- 312

Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
                           PVP+D ++  + R ++ITG N GGKT  MKT+GL +LM+ AGL 
Sbjct: 313 ----------------PVPLDFQLGKDYRGLIITGANAGGKTIVMKTVGLLTLMAMAGLQ 356

Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
           +PA+    L  FD +  DIGD Q++E  LSTFS H+  I  I++   R +LVL+DE+GSG
Sbjct: 357 VPAQAGTELAVFDQLFVDIGDEQNIENQLSTFSAHMKNIAKIVQKAGRNTLVLLDELGSG 416

Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
           TDP+EG  LA +IL+ L  +  L V TTHY ++     K   F  AA +F  ETL P Y 
Sbjct: 417 TDPNEGAGLAIAILEDLYRKGALIVATTHYGEIKNFTKKHADFTPAAMKFDRETLTPKYV 476

Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           +  G  GDS AL IA+ +   + +IQRA K +
Sbjct: 477 LQVGEVGDSQALWIAQKMRLPKALIQRAGKYI 508


>gi|356546239|ref|XP_003541537.1| PREDICTED: mutS2 protein-like [Glycine max]
          Length = 363

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 113/172 (65%), Positives = 138/172 (80%)

Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
           +LQYL+DR  LAVVTTHYADLS +K+ DTRF+NA  EFSLETL+PTYRILWG TGDSNAL
Sbjct: 12  VLQYLKDRANLAVVTTHYADLSSMKETDTRFDNATMEFSLETLQPTYRILWGCTGDSNAL 71

Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
           +IA SIGFDR II RAQK VE+ + E+QQ R+  LY+SL EER +L++Q   AAS+HAEI
Sbjct: 72  SIAGSIGFDRNIIDRAQKWVEKFQSEQQQERRGMLYRSLQEERNRLKAQVEKAASIHAEI 131

Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 627
           M ++ EI+ EA+DLD+R   L AKETQQVQ EL  AK Q++TV+Q FE +LR
Sbjct: 132 MSVHNEIQGEAEDLDQREMELMAKETQQVQHELEHAKSQMETVIQKFEKRLR 183


>gi|373465637|ref|ZP_09557092.1| MutS2 family protein [Lactobacillus kisonensis F0435]
 gi|371759887|gb|EHO48594.1| MutS2 family protein [Lactobacillus kisonensis F0435]
          Length = 787

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 167/527 (31%), Positives = 261/527 (49%), Gaps = 68/527 (12%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
           +LD AS +L  IR    R   ++ + + K   +   A  + +P+IT R  R  + I+A +
Sbjct: 147 VLDSASSELRAIRKSISRTQTDIRTKMGKFI-KGSDAKYLSEPIITVRDDRFVLPIRADY 205

Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
           K     GI  + S+SG T ++EP   VE NN   R   +E AE   IL  LT  +     
Sbjct: 206 KQHF-GGIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERAEVRRILGELTNLLRPYRN 264

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
           E+   M+ V ++D   A+A +A     + P       +S D+ +N+   +HP++      
Sbjct: 265 ELMTNMNLVGQLDFVNAKAKYAHQTGSIQP------RISKDNVVNLRKARHPMI------ 312

Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
                                          D  V  DI++  +   +++TGPNTGGKT 
Sbjct: 313 -----------------------------DRDKVVANDIEIGDKYSTIIVTGPNTGGKTI 343

Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
           +MKT+GL  LM ++GL++ A    ++  FD + ADIGD QS+E NLSTFS H+  I+ +L
Sbjct: 344 TMKTIGLLQLMGQSGLFITANEDSQIGAFDEVFADIGDEQSIEANLSTFSSHMDNIISML 403

Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
           + +S  SLVL+DE+G+GTDP EG ALA +I+  +       + TTHY +L       +  
Sbjct: 404 DKISNNSLVLLDELGAGTDPKEGAALAMAIIDAIHATGCELIATTHYPELKAFAYNRSGI 463

Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
            NA+ EF + TLRPTYR L G  G SNALNIA+ +GF ++II  A+   +  + +   + 
Sbjct: 464 INASMEFDVNTLRPTYRFLMGIPGQSNALNIAQKLGFPKQIIDNARSFTDS-KNQDINNM 522

Query: 547 KSEL---YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
            +EL    +   +E  +L+ Q   +  LH E+ + + + + +    DR     + K  + 
Sbjct: 523 IAELTAQTKRAHDEADQLQKQLAESTKLHQELTNQFNKYQAQR---DRLTEQAQEKANRV 579

Query: 604 VQQELNFAKVQIDTVVQDF-------------ENQLRDASADEINSL 637
           V++    AK Q D ++ D              EN+L DA   E+N L
Sbjct: 580 VEE----AKQQADKIIADLHQKQKQIGKVAIKENELIDAKG-ELNKL 621


>gi|410583601|ref|ZP_11320706.1| MutS2 family protein [Thermaerobacter subterraneus DSM 13965]
 gi|410504463|gb|EKP93973.1| MutS2 family protein [Thermaerobacter subterraneus DSM 13965]
          Length = 881

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 189/600 (31%), Positives = 280/600 (46%), Gaps = 91/600 (15%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
           + L  + DI   L  A  G +L+P E+ AV  T R    +   L           QR + 
Sbjct: 63  IPLGGLADIRRSLQRAAKGGMLAPDELLAVAGTARGARRLKSFLA----------QREAT 112

Query: 99  LLELLKNCNFLTE---LEEKIGFCI--DCKLLIILDRASEDLELIRAERKRNMENLDSLL 153
              L      LT    LEE +   I  D +   + D AS  L  +R    R + +L+  +
Sbjct: 113 CPRLAARAARLTPQPALEEAVAAAIGEDGR---VRDEASPRLASLR----RRLADLEEAI 165

Query: 154 KKVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 209
           ++   ++ +    A  + +PL+T+RR R  + +KA  +  +P G+  + S+SGAT F+EP
Sbjct: 166 RRRLEEMIRSPQWAAALQEPLVTQRRGRFVLPVKAEARAQVP-GVVHDQSASGATLFIEP 224

Query: 210 KGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 269
              VE  N        E  E   IL+ LT  +A +  E+   ++ + E+D   AR   A 
Sbjct: 225 MAVVELGNRLREAEAEEQEEVERILAELTRLVAAAGDELAATLEELAELDAIVARGRLAL 284

Query: 270 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
            M    P    +  V    +      +HPLL                 +  DV   E   
Sbjct: 285 AMRAERPETLDRPRVDLKRA------RHPLL-------------GPGAVAIDVWLGE--- 322

Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
                G                  +VITGPNTGGKT ++KT+GL +LM +AGL++PA   
Sbjct: 323 ---GAGFD---------------TLVITGPNTGGKTVTLKTVGLLALMHQAGLHIPAAPG 364

Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 449
             L  F  I  D+GD QS+EQ+LSTFS H+S IV         +LVL+DEIG+GTDP EG
Sbjct: 365 SALGVFPQIFCDVGDEQSIEQSLSTFSSHMSAIVGFARAARPGALVLLDEIGAGTDPDEG 424

Query: 450 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
            ALA +++++ R R  L V TTHY+ L     +    ENA+ EF  ETLRPTYR+  G  
Sbjct: 425 AALAVALIEHFRSRGCLVVATTHYSALKAYAYQQPGVENASVEFDPETLRPTYRLWIGLP 484

Query: 510 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 569
           G S AL IA+ +G    I+QRA++++         HR  EL  ++  +RR++       A
Sbjct: 485 GKSMALTIAQRLGLPEPIVQRARQVM-----GAGAHRVEELIAAMEADRREI-------A 532

Query: 570 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE----LNFAKVQIDTVVQDFENQ 625
           +L AE     RE E           H + +E ++ +QE    L   + ++ T +Q+   Q
Sbjct: 533 ALRAEAETRRREAEA--------LRHQRLREMEEQRQEHRARLEALEREMATALQEARRQ 584


>gi|392531352|ref|ZP_10278489.1| DNA mismatch repair protein [Carnobacterium maltaromaticum ATCC
           35586]
          Length = 634

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 164/517 (31%), Positives = 259/517 (50%), Gaps = 61/517 (11%)

Query: 25  NQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT 83
           N+T  A A++ ++  +    +  I   +     G LL  S +  V   LR+   + ++  
Sbjct: 48  NETEEARALLDAKLTMPFMGLSSIDVFMEQLEKGLLLEASSLIDVADFLRS-GRMIRRFM 106

Query: 84  EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR---A 140
           E  E    +L  Y+      ++ +  TE+E++I F I      + D AS++L  IR   A
Sbjct: 107 EKYESLAPTLTMYA------RSISEFTEIEDEIYFSIKNGQ--VADEASKELRRIRRLIA 158

Query: 141 ERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
           E++  +E  L   LK    Q      I +  ++K+  R  + IKA++K  +  G  +  S
Sbjct: 159 EKESKIEERLSKFLKNKDNQ----KQIQEFFVSKKNERFTIPIKAAYKNQVA-GTIIETS 213

Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
           S G T F+EP    + N+    L   E  E   IL+ L+  I ++   I+  ++ + E D
Sbjct: 214 SKGTTVFIEPTAVTKLNDELAMLKVEESTEIYQILATLSGLILENLVPIQLNLETIAEYD 273

Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
           + FAR  +++ + GV P L+ + ++   +++      HPL+  ++               
Sbjct: 274 MIFARGKYSRLIQGVTPKLNQRGYIHLVNAV------HPLIEANA--------------- 312

Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
                                VP++  V  + R ++ITGPN GGKT  +KT+GL +LM+ 
Sbjct: 313 ---------------------VPLNFTVGEDYRGLIITGPNAGGKTVVLKTVGLLALMTL 351

Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
            G+ LPA     +  F+ I  DIGD QSLE  LSTFS HI  I DI+++  R SLVL DE
Sbjct: 352 LGIQLPADEGTEMGLFEGIFVDIGDSQSLENALSTFSSHIQNIADIMQVAPRNSLVLFDE 411

Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
           IGSGT+P+EG ALA +IL+    R  + V TTHY ++    +    F NAA  F+  TL 
Sbjct: 412 IGSGTEPNEGAALAIAILEEFYQRGNIVVATTHYGEIKRYSEIHPDFINAAMAFNQATLT 471

Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           P Y++L G +G+SNAL IAK +     +IQ+AQ+ +E
Sbjct: 472 PLYQLLMGESGESNALWIAKKMNLKEHVIQQAQRYME 508


>gi|430882566|ref|ZP_19484114.1| MutS2 protein [Enterococcus faecium E1575]
 gi|430556811|gb|ELA96306.1| MutS2 protein [Enterococcus faecium E1575]
          Length = 786

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D  +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511


>gi|293570971|ref|ZP_06682015.1| MutS2 family protein [Enterococcus faecium E980]
 gi|430841856|ref|ZP_19459773.1| MutS2 protein [Enterococcus faecium E1007]
 gi|431077718|ref|ZP_19495183.1| MutS2 protein [Enterococcus faecium E1604]
 gi|431112285|ref|ZP_19497661.1| MutS2 protein [Enterococcus faecium E1613]
 gi|431586437|ref|ZP_19520952.1| MutS2 protein [Enterococcus faecium E1861]
 gi|431737011|ref|ZP_19525967.1| MutS2 protein [Enterococcus faecium E1972]
 gi|291608955|gb|EFF38233.1| MutS2 family protein [Enterococcus faecium E980]
 gi|430493674|gb|ELA69965.1| MutS2 protein [Enterococcus faecium E1007]
 gi|430566133|gb|ELB05254.1| MutS2 protein [Enterococcus faecium E1604]
 gi|430569239|gb|ELB08256.1| MutS2 protein [Enterococcus faecium E1613]
 gi|430593615|gb|ELB31601.1| MutS2 protein [Enterococcus faecium E1861]
 gi|430599387|gb|ELB37093.1| MutS2 protein [Enterococcus faecium E1972]
          Length = 786

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D  +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511


>gi|425055377|ref|ZP_18458853.1| MutS2 family protein [Enterococcus faecium 505]
 gi|403034046|gb|EJY45521.1| MutS2 family protein [Enterococcus faecium 505]
          Length = 786

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 149/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D  +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511


>gi|431757639|ref|ZP_19546268.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E3083]
 gi|430618144|gb|ELB54991.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E3083]
          Length = 642

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 161/510 (31%), Positives = 252/510 (49%), Gaps = 56/510 (10%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDTLTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCI-DCKLLIILDRASEDLELIRAERKRNM 146
             D  Q  +PLL    K+   L  +EE I   I D K   + D AS +L  +R + +   
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEELIDQKIKDNK---VSDDASRNLRKVRKQLQIIE 161

Query: 147 ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYF 206
           + + S L K          I + +I ++     + IK S+K  + DG  ++ S+ G T F
Sbjct: 162 KEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKVSYKNKV-DGTIIDESNKGTTVF 220

Query: 207 MEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAG 266
           +EP    + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA 
Sbjct: 221 IEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARAK 280

Query: 267 FAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSE 326
            ++ ++G+ P ++   H+           +HP L                          
Sbjct: 281 LSREINGITPKINKSEHIVIKQG------RHPFL-------------------------- 308

Query: 327 MTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 386
                      D  VP+DI++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +PA
Sbjct: 309 ----------PDHAVPLDIEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVPA 358

Query: 387 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDP 446
           K    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+P
Sbjct: 359 KEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTEP 418

Query: 447 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
           +EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++  
Sbjct: 419 NEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLRV 478

Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 479 GETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|251780590|ref|ZP_04823510.1| MutS2 family protein [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084905|gb|EES50795.1| MutS2 family protein [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 785

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 205/727 (28%), Positives = 342/727 (47%), Gaps = 100/727 (13%)

Query: 11  IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
           +P+  + E +  L     A   +M+     +  + DI  IL  A  G  L+P ++  V  
Sbjct: 35  VPYDNTYEINNSLEESNEALEILMKKGNPPIEGLCDIGDILQRAKKGGTLTPEQLLKVLG 94

Query: 71  TL---RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
            L   R +   +K+  E  E+   S  +   L  +L   N L +  E+     D     +
Sbjct: 95  MLTATRRMQEFFKR--EEQEV---SFPKLEDLAYILAPINDLEKEIERSILSEDE----V 145

Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKAS 185
            D AS  L  IR    R+++  +S +++    I ++    +   L T R  R  + +KA 
Sbjct: 146 SDNASTTLYNIR----RSLKEKNSSVREKINSIVRSNSKYLQDSLYTIRGDRYVIPVKAE 201

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           +K  +P G+  + SS+GAT F+EP G V  NN    L   E AE   +LS L+ ++  + 
Sbjct: 202 YKSSVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIDRVLSALSLKVKMNA 260

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
              +     +  +D  F++  +A  ++ + P+      V  D   NI   +HPL+     
Sbjct: 261 EHCESNFKILTNLDFIFSKGKYACELNAIKPM------VRDDGIFNIMSGRHPLIE---- 310

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                                           D  VP+D+ +  E   ++ITGPNTGGKT
Sbjct: 311 -------------------------------KDKVVPLDVVLGDEFDTLMITGPNTGGKT 339

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            ++KT+GL  +M+ +GL +PA ++  + +F  + ADIGD QS+EQ+LSTFS H++ IV+I
Sbjct: 340 VTLKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIEQSLSTFSSHLTNIVNI 399

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           +E  +R+SL+L DE+G GTDP+EG ALA +I++ L  +    + TTHY++L        R
Sbjct: 400 MEYDNRQSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKLIATTHYSELKAYALNKER 459

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
            ENA+ EF + TLRPTYR+L G  G SNA  I+K IG  +++I  A+  + +   E +  
Sbjct: 460 VENASVEFDINTLRPTYRLLIGVPGKSNAFEISKRIGLGKEVIDCAKNYMSKENLEFEG- 518

Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKAKETQQ 603
               L ++L E+    +  AR A  +  E  +L ++ E + + L+  +  A++ A+E  +
Sbjct: 519 ----LIRNLQEKSIIAKKDARDAKVIKDEADNLKKKYEQKLERLEKVKDKAYMDAREEAK 574

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE-----SAIAAIVEAHRP--DD 656
                         +V + +++     ADEI   ++E E     S     +E  R    D
Sbjct: 575 -------------KIVANAKDE-----ADEILKAMRELEKLGIGSGGRQRLEEERKKLKD 616

Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLG--------DKLATVVEVPGDDDTVLVQYGKMRVR 708
                E          GE +   +LG        ++   V+ +P +   V V+ G M++ 
Sbjct: 617 SLEEKEKKLYKMKENDGEVLEKVALGMEAFLPSLNQTVVVISMPDNRGEVQVEAGIMKIS 676

Query: 709 VKKNNIR 715
           VK  ++R
Sbjct: 677 VKLKDLR 683


>gi|311030652|ref|ZP_07708742.1| MutS family DNA mismatch repair protein [Bacillus sp. m3-13]
          Length = 643

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 163/536 (30%), Positives = 278/536 (51%), Gaps = 59/536 (11%)

Query: 7   QKAQIPFGKSLEESQ--KLLNQTSAA---LAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           + A +  G S+ + Q    LN+ +     LA+  S P+    +  I  IL +   G    
Sbjct: 28  KNAVLTLGPSVNKRQIEAWLNEVTEGKKILAISSSVPI--HGLHGIEYILKNLHKGIAFR 85

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
           P ++  +   L  +  + K+  +  E     +  Y      + +   L+ + E+I  CI 
Sbjct: 86  PDQLMGLHDFLDTIEKL-KRFMKDKEYVAPVITSY------IYSVTELSHVAEEIIRCIR 138

Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
                + D AS++L  +R +     E + + ++++      +  + + L++ R  R  + 
Sbjct: 139 NGR--VDDYASKELLKVRKQIATLEERIKNRIEQLVKSTKYSKYLQENLVSTRNGRYVIP 196

Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
           +K  +K  +  G  L+VS+SG+T +MEP+      +    L   E AEE  IL  LT  +
Sbjct: 197 VKKEYKNNI-KGSVLDVSASGSTVYMEPEEISIIQDSISMLKFQEEAEEEQILFALTGLV 255

Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
            + E+EIK  MD ++  D+ FA+A  +  M+G  P ++ + HV     I +EG +HPLL 
Sbjct: 256 QEHEKEIKLAMDLMVSYDVIFAKAKHSLLMNGTSPQIN-EHHV-----IRLEGARHPLLG 309

Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
            ++                                    VP+++ +  +   +VITGPNT
Sbjct: 310 KNA------------------------------------VPLNLVIGEDYDALVITGPNT 333

Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
           GGKT ++KT+GL +LM++ G+++PA+    +  F  +L DIGD QS+EQ+LSTFS  +  
Sbjct: 334 GGKTVTIKTVGLLTLMAQCGMHIPAEKGSEIAIFHKVLVDIGDGQSIEQSLSTFSSRVKN 393

Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
           I+ IL   + ++LVL+DE+GSGTDP+EG+ LATSIL+ L ++    + TTHY+++    +
Sbjct: 394 IIGILAESTPQTLVLLDELGSGTDPAEGMGLATSILEELYNKGTTMLATTHYSEIKEFAN 453

Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
           +   F N + EF++ETL+PTYR++ G  GDS A  IA  +G   K+I+RA ++  +
Sbjct: 454 EQKGFCNGSMEFNVETLKPTYRLIVGKGGDSQAFAIALRLGMHPKLIERAHQITYK 509


>gi|404369300|ref|ZP_10974641.1| MutS2 protein [Fusobacterium ulcerans ATCC 49185]
 gi|313690687|gb|EFS27522.1| MutS2 protein [Fusobacterium ulcerans ATCC 49185]
          Length = 778

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 197/658 (29%), Positives = 327/658 (49%), Gaps = 103/658 (15%)

Query: 91  DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENL- 149
           + L +Y  L +   +   L  +E+ I   ID    I  D AS DL  IR  +K    N+ 
Sbjct: 108 EDLNKYKDLRDKFNDVPILRGIEDIINKAIDNNKEI-KDDASLDLRDIRIHKKTLAMNIK 166

Query: 150 ---DSLLKKVA-AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
              D L  +   A++FQ     + +IT+R  R  V +KA  K  +  GI  + SSSG T 
Sbjct: 167 RKFDELFNEPQFAKVFQ-----EKIITERDGRSVVPVKADFKGQIK-GIEHDRSSSGQTV 220

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP   V  NN    L   E  E   IL  +T  I  S+ +I  + + V+ +D+  ARA
Sbjct: 221 FIEPLSIVALNNKNRELEIKEKEEIRKILLRITDYIRNSKDDIDRVGEAVITLDILNARA 280

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            +      V P ++++  ++   +      +HP +  SS+                    
Sbjct: 281 MYGIEKKCVVPNINNREILTLVDA------RHPFIPVSSV-------------------- 314

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                          VP+  ++  +   ++ITGPNTGGKT ++KT GL +LM+ +G+ +P
Sbjct: 315 ---------------VPLTFEIGKDYNTLLITGPNTGGKTVALKTAGLLTLMALSGIPIP 359

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           A  H  + +F  + ADIGD QS+EQ+LS+FS H+  + +ILE V+R SLVL+DE+GSGTD
Sbjct: 360 AHEHSSIGFFTGVYADIGDEQSIEQSLSSFSAHLKNVQEILENVTRASLVLLDELGSGTD 419

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG A A +++ YL+D+   +++TTHY+++      +   E A+ EF++ETL PTYR+L
Sbjct: 420 PAEGSAFAMAVIDYLKDKKCKSIITTHYSEVKAHGYNEEGIETASMEFNVETLSPTYRLL 479

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ----HRKSE- 549
            G  G+SNAL IA+ +G   ++I +A           +K++  ++ +  +     R+ E 
Sbjct: 480 IGIPGESNALTIARRLGVSEEVINKAKSYISDDNKKIEKMISNIKDKADELDIMKRQVEF 539

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA----KDLDRRAAHLKAKETQQVQ 605
           L ++   ++   E + R    L  E  D+ +E  ++A    K++  +AA L     +++Q
Sbjct: 540 LKEAAQRDKEAFEEKLRV---LEKEKNDILKEAYEKADRMMKEMQSKAAAL----VEKIQ 592

Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 665
           +E N  K  I  V +   N LR A  D+    + E       +        DF V     
Sbjct: 593 KEDN-KKEDIKNVQKSL-NMLRSALQDDKTKTVAEKPKVARKV--------DFKV----- 637

Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
                  GE++ V SL ++ A V+++    +TV VQ G +++ V  ++++ +   K+K
Sbjct: 638 -------GERLFVNSL-NQFANVLKINLSKETVQVQAGILKLEVSLDDVKVVEEKKQK 687


>gi|403253752|ref|ZP_10920053.1| DNA mismatch repair protein [Thermotoga sp. EMP]
 gi|402811286|gb|EJX25774.1| DNA mismatch repair protein [Thermotoga sp. EMP]
          Length = 757

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 203/678 (29%), Positives = 316/678 (46%), Gaps = 83/678 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           +  + DI+  +    SG  L P E+  V   L   + + KK  E  E        YS L 
Sbjct: 60  IKGLNDISQEVEKVKSGSPLEPWELLRVSVFLEGCD-ILKKEFEKRE--------YSRLK 110

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
           E     +   E  E++  CI+    I  DRAS  L  IR E+KR    L S +K+ A   
Sbjct: 111 ETFSRLSSFREFVEEVNRCIEQDGEIS-DRASPRLREIRTEKKR----LSSEIKRKADDF 165

Query: 161 FQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
            +     + + +   R  R    +KAS K  +  GI  ++SSSGAT F+EP   VE NN 
Sbjct: 166 VRTHSQILQEQMYVYRDGRYLFPVKASMKNAV-KGIVHHLSSSGATVFLEPDEFVELNNR 224

Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
              L   E  E + IL  LT  +    ++++  ++ +   D  +AR  FA+  +G     
Sbjct: 225 VRLLEEEERLEISRILRQLTNILLSRLKDLERNVELIARFDSLYARVKFAREFNGTV--- 281

Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
                V   S I +   +HPL+    +                                 
Sbjct: 282 -----VKPSSRIRLVNARHPLIPKERV--------------------------------- 303

Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
             VPI++++    R  +ITGPN GGKT ++KT+GL + +  +G  LP      L  F  I
Sbjct: 304 --VPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELKVFPKI 361

Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
           +ADIG+ QS+EQ+LSTFS H+ +IV+I++    +SLV++DE+GSGTDP EG ALA +I++
Sbjct: 362 MADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALAIAIIE 421

Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
            L ++     VTTH   +           NA+ EF  ETL PTYR+L G  G S+A  IA
Sbjct: 422 DLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSHAFQIA 481

Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
           + +G D++I++ A     R R  +++     L +SL E+   LE + R       E M L
Sbjct: 482 EKLGLDKRIVENA-----RSRLSQEEMELEGLIRSLHEKISLLEEEKRKLQKEREEYMKL 536

Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 638
             + E++ K L R       +E +++   +   K ++D  +    +  +  S DE+   +
Sbjct: 537 REKYEEDYKKLRRMKIEEFDRELRELNDYIRKVKKELDQAI----HVAKTGSVDEMREAV 592

Query: 639 KESESAIAAIVEAHRPD-DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 697
           K         +E  + D +   + E       P  G+ V ++  G  +  VVEV G  DT
Sbjct: 593 K--------TIEKEKKDLERKRIEEAPEEEIKP--GDHVRMEG-GTSVGKVVEVKG--DT 639

Query: 698 VLVQYGKMRVRVKKNNIR 715
            LV +G +R++V  + +R
Sbjct: 640 ALVDFGFLRLKVPVSKLR 657


>gi|229917597|ref|YP_002886243.1| DNA mismatch repair protein MutS domain-containing protein
           [Exiguobacterium sp. AT1b]
 gi|229469026|gb|ACQ70798.1| DNA mismatch repair protein MutS domain protein [Exiguobacterium
           sp. AT1b]
          Length = 638

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 165/525 (31%), Positives = 262/525 (49%), Gaps = 72/525 (13%)

Query: 21  QKLLNQTSAALAMMQSQP----LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           +K L +TS A A++ +      + +S +E I G L   +    L  +E+ AV   LR   
Sbjct: 44  KKRLQETSEARAILDATSHVPFIGVSDMETIIGKLQRGIQ---LEATELEAVAEFLRGAR 100

Query: 77  NVWKKLTEAAELDGDSLQRYSPLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
            + + + E         + ++PLL            LEE I   I    ++  D AS++L
Sbjct: 101 KLKRFMLEH--------EFFAPLLSAYAAGMGEWRTLEEDITQAIRAGQVV--DEASKEL 150

Query: 136 ELIRAE----RKRNMENLDSLLKKVA-AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
           + IR +      R  E L   LK  A  ++ Q G      +TK++ R  + IKAS+K+ +
Sbjct: 151 KRIRKQVDILEGRIEERLTKFLKSAANREMIQDG-----FVTKKQDRFTIPIKASYKHKV 205

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
             G  ++ S+ G T F+EP+   + N   V     E  E   +L+ LT  + +   +I+ 
Sbjct: 206 A-GTIVDTSNRGTTVFIEPEAIAKLNAELVVKRTEEAVEVYQVLATLTGAVTEVLPDIES 264

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            +D + + D+ FA+  ++Q +DGV P      HV+    I ++ ++HPLL          
Sbjct: 265 TLDVIAQYDMVFAKGKYSQSIDGVTP------HVNVSGRIRLKQVRHPLL---------- 308

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                                      +  VP+D  +  + R ++ITGPN GGKT  +KT
Sbjct: 309 ---------------------------ESAVPLDFAIGTDYRGLIITGPNAGGKTVVLKT 341

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           +GL SLM+  GL++PA     +  FD +  DIGD+Q LE  LSTFS H+  + +I++   
Sbjct: 342 IGLLSLMTMTGLHIPAHTDTVISTFDEVFVDIGDNQDLESALSTFSAHMYNVANIMQTAG 401

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
           + SL+L DEIGSGT+P+EG ALA +IL+    R  + V +THY ++    +    F NAA
Sbjct: 402 KRSLLLFDEIGSGTEPNEGAALAIAILEAAYKRGAIVVASTHYGEIKSYSEAHPDFMNAA 461

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
            +F  ETL P YR+L G +GDSNAL IA+ +     I+++A + +
Sbjct: 462 MQFDPETLEPKYRLLMGQSGDSNALFIARKMKLPESILKQASRYM 506


>gi|227551015|ref|ZP_03981064.1| DNA mismatch repair protein MutS [Enterococcus faecium TX1330]
 gi|257896641|ref|ZP_05676294.1| DNA mismatch repair protein MutS [Enterococcus faecium Com12]
 gi|293379657|ref|ZP_06625793.1| MutS domain V protein [Enterococcus faecium PC4.1]
 gi|424765594|ref|ZP_18192987.1| MutS domain V protein [Enterococcus faecium TX1337RF]
 gi|430847593|ref|ZP_19465429.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1133]
 gi|227179850|gb|EEI60822.1| DNA mismatch repair protein MutS [Enterococcus faecium TX1330]
 gi|257833206|gb|EEV59627.1| DNA mismatch repair protein MutS [Enterococcus faecium Com12]
 gi|292641655|gb|EFF59829.1| MutS domain V protein [Enterococcus faecium PC4.1]
 gi|402416715|gb|EJV49030.1| MutS domain V protein [Enterococcus faecium TX1337RF]
 gi|430536911|gb|ELA77271.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1133]
          Length = 642

 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 160/511 (31%), Positives = 252/511 (49%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDTLTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S L K          I + +I ++     + IK S+K  + DG  ++ S+ G T 
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKVSYKNKV-DGTIIDESNKGTTV 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
             ++ ++G+ P ++   H+           +HP L                         
Sbjct: 280 KLSREINGITPKINKSEHIVIKQG------RHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  VP+DI++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVPLDIEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|160942186|ref|ZP_02089501.1| hypothetical protein CLOBOL_07076 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435077|gb|EDP12844.1| hypothetical protein CLOBOL_07076 [Clostridium bolteae ATCC
           BAA-613]
          Length = 680

 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 173/518 (33%), Positives = 260/518 (50%), Gaps = 62/518 (11%)

Query: 17  LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
           L  S +   Q    L +  + P+    +E  A  +  +V G+LL+P E+  +   L AV 
Sbjct: 58  LRRSMRDTTQARQMLELAGTPPM--PAMEHTAEFVARSVRGELLTPEEMEEIGMFLAAVR 115

Query: 77  NVWKKLTEAAELDGDSLQRYS-PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
            V   L        D    Y  PL    +N   +TEL+E+I   I  +   + DRAS  L
Sbjct: 116 RVRSYL--------DKGMSYGIPLSCYGENLRLMTELKEEIEGAI--RHGRVDDRASNTL 165

Query: 136 ELIRAERKRNMENLDSLLKKVAAQIF--QAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
             IR    R+++ L+  +K  A  +   Q   + +  +  R  R+C+ +K  +K  +P G
Sbjct: 166 RDIR----RDLQLLEEKIKDKAEALLKSQKKFMAESFLVTRNGRLCLPVKKEYKSKIP-G 220

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
             ++ SSSG+T F+EP+      +    L   E  EE  IL  L   IA  E   K  + 
Sbjct: 221 STIDRSSSGSTVFIEPETIARMQDEIEGLRIEEDCEERRILYTLMDRIAMEEDGFKENLA 280

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            + ++D  FA+   +  MD   P +++Q  +    +      +HPLL G           
Sbjct: 281 LLAKLDFVFAKGKLSAQMDAREPAVNTQGIICLKEA------RHPLLPG----------- 323

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
           +SN                        VP+D K+  ETR +VITGPNTGGKT ++KT+GL
Sbjct: 324 DSN------------------------VPLDFKLGGETRGMVITGPNTGGKTVAIKTVGL 359

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
             LM+ +GL+LP +    +   +L+L DIGD Q +  NLSTFS HI+ +++IL+  + ES
Sbjct: 360 FVLMACSGLHLPCREAD-IAMRNLVLCDIGDGQDILDNLSTFSAHITNVLEILKRATGES 418

Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
           LV++DE+GSGTDP+EG+ +A +IL+ LR R  L +VTTHY ++     +     +A   F
Sbjct: 419 LVILDELGSGTDPAEGMGIAIAILEQLRLRGCLYLVTTHYPEVKTYAGRHAELISARMAF 478

Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
             E LRP YR+  G TGDS AL IAK +G    +I+ A
Sbjct: 479 DRENLRPLYRLEMGKTGDSCALYIAKRLGMPEDMIRTA 516


>gi|270290146|ref|ZP_06196372.1| MutS2 family protein [Pediococcus acidilactici 7_4]
 gi|270281683|gb|EFA27515.1| MutS2 family protein [Pediococcus acidilactici 7_4]
          Length = 636

 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 165/511 (32%), Positives = 252/511 (49%), Gaps = 53/511 (10%)

Query: 26  QTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
           +T  A  +++S Q + L  ++ I  ++N    G +L+P+E+      LR+ N + KK  E
Sbjct: 50  ETKEARIIIESGQYIPLLGLKQINRLMNKIDKGVILTPAELIEFADFLRS-NRMLKKFFE 108

Query: 85  AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
                  +L +YS  L      +  T  E+ I   +D     +LD AS DL   R + K 
Sbjct: 109 KNRYQTPTLYKYSQAL------SKFTTTEDHIYQKVDD--YEVLDDASRDLRKARRQFKT 160

Query: 145 NMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 204
             + +   L K          I   LI +++  + V IKAS+K+ +P G  ++ SS+G T
Sbjct: 161 IKDEIQDKLMKFLRSPKNKPMIQDVLIVEKQGSITVPIKASYKFKVP-GTIVDQSSNGQT 219

Query: 205 YFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFAR 264
            ++E     + N           +E   IL+ LT+E+++    I   +D V   D+ FAR
Sbjct: 220 VYIELDLVAKLNEKRAFQKAVIESESYQILAELTSELSEQRTSILNAIDAVTMFDIIFAR 279

Query: 265 AGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVEN 324
           A +++  DG+ P ++          INI   +HP L+G+                     
Sbjct: 280 AKYSREYDGITPQINQAER------INIIQGRHPFLVGT--------------------- 312

Query: 325 SEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 384
                          PVP+D ++  + R ++ITG N GGKT  MKT+GL +LM+  GL +
Sbjct: 313 ---------------PVPLDFQLGKDYRGLIITGANAGGKTIVMKTVGLLTLMAMVGLQV 357

Query: 385 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 444
           PA+    L  FD +  DIGD Q++E  LSTFS H+  I  I++   R +LVL+DE+GSGT
Sbjct: 358 PAQAGTELAVFDQLFVDIGDEQNIENQLSTFSAHMKNIAKIVQKAGRNTLVLLDELGSGT 417

Query: 445 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 504
           DP+EG  LA +IL+ L  +  L V TTHY ++     K   F  AA +F  ETL P Y +
Sbjct: 418 DPNEGAGLAIAILEDLYRKGALIVATTHYGEIKNFTKKHADFTPAAMKFDRETLTPKYVL 477

Query: 505 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
             G  GDS AL IA+ +   + +IQRA K +
Sbjct: 478 QVGEVGDSQALWIAQKMRLPKALIQRAGKYI 508


>gi|293378174|ref|ZP_06624343.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium PC4.1]
 gi|292643038|gb|EFF61179.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium PC4.1]
          Length = 786

 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 148/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       N E  V            P DI +  + + +VITGP
Sbjct: 311 I-----------------------NQEKVV------------PNDIAIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  V+IL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVEILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D  +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511


>gi|431752768|ref|ZP_19541448.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E2620]
 gi|430613227|gb|ELB50244.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E2620]
          Length = 642

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 160/511 (31%), Positives = 252/511 (49%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDTLTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S L K          I + +I ++     + IK S+K  + DG  ++ S+ G T 
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKVSYKNKV-DGTIIDESNKGTTV 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
             ++ ++G+ P ++   H+           +HP L                         
Sbjct: 280 KLSREINGITPKINKSEHIVIKQG------RHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  VP+DI++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVPLDIEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|373112741|ref|ZP_09526968.1| MutS2 protein [Fusobacterium necrophorum subsp. funduliforme
           1_1_36S]
 gi|371654881|gb|EHO20242.1| MutS2 protein [Fusobacterium necrophorum subsp. funduliforme
           1_1_36S]
          Length = 518

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 158/498 (31%), Positives = 252/498 (50%), Gaps = 52/498 (10%)

Query: 39  LDLSTIEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
           LD+  ++DI  +     + G  L   E+  +   LR       +L        + L +Y 
Sbjct: 63  LDVRHLKDICSLTEKIKLIGTYLEVDELWDINMNLRFFRIFQAQL--------EDLGKYK 114

Query: 98  PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
            L + ++  + L  +E+ I   +D +  I  D AS DL  IR  +K   +N+     ++ 
Sbjct: 115 ALRDYMRQVSPLRLIEDLISKAVDSEKQI-KDEASLDLRDIRIHKKMLAQNIRRKFDELF 173

Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
            +   A    + ++T+R  RM V +K   K L+  GI  + SSSG T F+EP   V  NN
Sbjct: 174 EEASIAVAFQERIVTERDGRMVVPVKVDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNN 232

Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
               L   E  E   IL  L+ +I   + E+  +   +L +D   A+A F   ++  C +
Sbjct: 233 KMRELETKEKEEIRKILLRLSEQIRNHQDEMYKIGTMILYLDRLQAKANFG--LEEACHV 290

Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
            + Q        + +E  +HP +    +                                
Sbjct: 291 PTIQG----KEILYLEKARHPFIPKEKV-------------------------------- 314

Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
              VP+  ++  + R+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  H ++ +F  
Sbjct: 315 ---VPLTFEIGKDYRILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEHSKIGFFQG 371

Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
           + ADIGD QS+EQ+LS+FS H++ + +IL  V R  LVL+DE+GSGTDP+EG A A SI+
Sbjct: 372 VFADIGDEQSIEQSLSSFSAHVTNLQEILREVHRNCLVLLDELGSGTDPTEGSAFAMSII 431

Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
            YL+++   A++TTHY+++      +   E A+ EF   TL PTYR+L G  G+SNAL I
Sbjct: 432 DYLKEKKCNAIITTHYSEVKAHGYNEEGIETASMEFDTATLSPTYRLLMGIPGESNALTI 491

Query: 518 AKSIGFDRKIIQRAQKLV 535
           AK +G  + II +AQ  +
Sbjct: 492 AKRLGVPQDIIDKAQSYI 509


>gi|257877500|ref|ZP_05657153.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC20]
 gi|257811666|gb|EEV40486.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC20]
          Length = 787

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 173/512 (33%), Positives = 259/512 (50%), Gaps = 80/512 (15%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS  L  IR   +R      E LD +++   A+      +   ++T R  R  + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 239
           K  ++ +   G+  + SSSG T F+EPK  VE NN   RL   +IAE    T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILAELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+A  +REI +    +  +D   A+A F + M  + P ++  +HV F  +      +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKDYQAVVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  +M +AGL + A+   ++  F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGVFNEIFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           + IV++L+ V   SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TTIVEVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
               +   NA+ EF ++TL PTYR+L G  G SNA  I+K +G    II +A++++    
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPDTIIDQAKEIM---- 511

Query: 540 PERQQHRKSELYQSLMEERRKL--------ESQARTAASLHAEIMDLYRE-IEDEAKDLD 590
            + +    +E+   L E RRK+            + AA LH E+   Y    E+  K+L 
Sbjct: 512 -DGESQDLNEMIADL-ENRRKMTETEYLEVRHHVKEAARLHQELEAAYSYFFEEREKEL- 568

Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
                  AK  Q+  Q +  AK + + ++ D 
Sbjct: 569 -------AKARQKANQIVEEAKEESEKIIADI 593


>gi|169334053|ref|ZP_02861246.1| hypothetical protein ANASTE_00446 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258770|gb|EDS72736.1| recombination and DNA strand exchange inhibitor protein
           [Anaerofustis stercorihominis DSM 17244]
          Length = 796

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 196/638 (30%), Positives = 324/638 (50%), Gaps = 90/638 (14%)

Query: 96  YSPLLELLKNCNFLTELEEKIG-FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 154
           +  LL+   N   L+ L+++I    ID +   I D+AS  L  IR    RN++N ++ ++
Sbjct: 116 FDILLDYADNIEDLSFLQKEIDRVIIDSEA--ISDKASSTLYDIR----RNIKNTNNKIR 169

Query: 155 KVAAQIFQAGGIDKPL----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
           +    I  +    K L    +T R SR  V +K+ ++  +  GI  + S SGAT F+EP+
Sbjct: 170 EKLNSIINSKTYQKYLSENIVTIRYSRYVVPVKSEYRGEVK-GIVHDTSQSGATLFIEPE 228

Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
             V  NN    L   E  E   IL +L+ +I ++   +    + +L +D+  A++ F+  
Sbjct: 229 AIVNLNNKLKELEVEEQKEIEVILRILSNKIKENASNLNVNENILLYLDVLNAKSRFSIK 288

Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
            D   P +SS      D  I ++  +HPL+                         EM   
Sbjct: 289 NDYHKPKISS------DEEIVLKSARHPLI-------------------------EMNKA 317

Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
                     VP +I ++ + R ++ITGPNTGGKT ++KT+GL SL+ ++GL++PA +  
Sbjct: 318 ----------VPSNIILDKDHRALIITGPNTGGKTVTLKTVGLCSLLFQSGLFIPANDGS 367

Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
           RLP ++ I ADIGD+QS+ Q+LSTFSGH++ IVDI+   + ++LVL+DE+  GTDP+EG 
Sbjct: 368 RLPIYEKIFADIGDNQSIAQSLSTFSGHMTNIVDIVNSANDKTLVLLDELCVGTDPTEGS 427

Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
           ++A SI+  L++       TTHY+++           NA+ EF +ETL PTYR++ G  G
Sbjct: 428 SIAISIIDNLKNIGARIFSTTHYSEIKEYAIVKKNVMNASVEFDVETLSPTYRLILGIPG 487

Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLMEERRKLESQARTAA 569
            SNA  I+K +G    II+ A+K +       + +R+ E L + L E+  K+E +     
Sbjct: 488 KSNAFEISKKLGLKDSIIRDAKKYL------TEDNREVEDLIKELNEKAVKVEEEKTQID 541

Query: 570 SLHAEIMDLYREIEDEAKDLDRRA------AHLKAK--------ETQQVQQELNFAKVQI 615
            L  E  +L   +E E   ++         A LKAK        +++++   LN  K+ I
Sbjct: 542 RLLRENKELNERLESEKAYIEENKSKIMMEASLKAKDIIAAAKRDSKELINRLN--KINI 599

Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--G 673
              V     + ++  A+ I   IKE E  + + + +H         E N  +    F  G
Sbjct: 600 PKNVNANNTKFKE-EAENIKKQIKEKEELLNSYIPSHELK-----KEGNNKNRKEDFKVG 653

Query: 674 EQVHVKSLGDKLATVVEVPGDDD--TVLVQYGKMRVRV 709
           E+V++KSL D+ A+++   G D+   V +Q G ++ ++
Sbjct: 654 EEVYIKSL-DQYASIL---GFDNKSNVFIQAGIIKTKI 687


>gi|222613119|gb|EEE51251.1| hypothetical protein OsJ_32115 [Oryza sativa Japonica Group]
          Length = 845

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 214/767 (27%), Positives = 365/767 (47%), Gaps = 80/767 (10%)

Query: 16  SLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAV----SGQLLSPSEICAVR 69
           S E+S++LL +T AA+ ++ S    +D S ++ +  ++ SA+     G ++   E  A+ 
Sbjct: 85  SYEQSRRLLEETGAAVRLIDSAGGGIDFSGLDTV--MVESAIHGVSGGAVIKGQEAMAIV 142

Query: 70  RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
             +  V ++   +  A + D DS +R   L E + + +    L + I   ID     I D
Sbjct: 143 SLMLFVESLQVTIKAAMKQDEDSHERLISLTETILDADINKSLVKSIQDVIDDDG-SIKD 201

Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL--ITKRRSRMCVGIKASHK 187
            AS +L   R + +     L  L+ K+         +      +     R C+ +     
Sbjct: 202 TASPELRRYREQVQVLESRLYQLMDKLVRNADNEASVSVLFHEVCIVNGRCCIKVTGDKS 261

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSER 246
               DG+ L+ S + A   +EP  AV  N+ E++ + + +A+ E   LS +T +I     
Sbjct: 262 SPF-DGLLLS-SGTDAGSMVEPIVAVPLND-ELQQARALVAKAELDALSKMTDKILLELD 318

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS--------------------SQSHVSF 286
            I+ L+   +E+D   ARA ++   DG  P L                     S +H+S 
Sbjct: 319 NIRILLQATVELDKVAARAKYSIAYDGTYPDLYLPNFVNGTVSTATGGSISTISSAHLSK 378

Query: 287 DS-SINIEGIKHPLLLGSSLRSLSAASSN--------------------SNPLKSDVENS 325
            +  + +    HPLLL     +L  A  +                     + L SD++  
Sbjct: 379 KAWKLCMPNAYHPLLLQQHQENLHRAKKDVASATAEIRRRRIYGQDNVEEDQLASDLDLM 438

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
           ++ V  + K   D PVP+D  +   T V+VITGPNTGGKT S+KT+GLASLM+K GLY+ 
Sbjct: 439 KIRVSQMEK---DRPVPVDFFIAEGTTVLVITGPNTGGKTISLKTVGLASLMAKIGLYIL 495

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           A    ++PWF+ + ADIGD QSL Q+LSTFSGH+ +I  I    + +SLVL+DE+G+GT+
Sbjct: 496 ASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAWSTSQSLVLLDEVGAGTN 555

Query: 446 PSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDK---------DTRFENAATEFSL 495
           P EG AL  S+L+   +    L + TTH+ +L  LK +         +  FENA  EF  
Sbjct: 556 PLEGAALGMSLLESFAEAGSFLTLATTHHGELKTLKYRAHYIVHTFSNDLFENACMEFDE 615

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE-----RQQHRKSEL 550
           + L+PT+RILWG  G SNA+NIA+ +G    II+ +++L+     E            + 
Sbjct: 616 DNLKPTFRILWGIPGRSNAINIAERLGLPSDIIESSRQLLGTAGAEINALIMDMENFKQQ 675

Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL-- 608
           YQ  ++E +    Q++    LH  +    + I D      +R A + ++     +  +  
Sbjct: 676 YQHHLQEAQYYVMQSK---ELHNNLEVAQKNIIDHTSAQRKRKARVISEYAVMARSIIRK 732

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
            F + +   + +    + +    D+   L     ++  A+ +A   +   + +     + 
Sbjct: 733 KFQQFRESAIAKRVLEEEKAVQNDKPERLKDPEPTSTPAVKKAQNTNISMATTTEGEDNG 792

Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
            P+ G+ V+V  L ++ ATVV++    + V VQ G M++++K  +++
Sbjct: 793 IPEVGDLVYVPKLKNE-ATVVKIDSSKNEVQVQAGIMKLKLKFKDVK 838


>gi|397691555|ref|YP_006528809.1| MutS2 family protein [Melioribacter roseus P3M]
 gi|395813047|gb|AFN75796.1| MutS2 family protein [Melioribacter roseus P3M]
          Length = 782

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 190/678 (28%), Positives = 333/678 (49%), Gaps = 72/678 (10%)

Query: 49  GILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNF 108
            I  S + G +LS  EI  + R  +    +   L    + D       +PL EL      
Sbjct: 75  AIYRSRIEGVVLSSKEIREIYRLAQMSRKMVGYLKPEDQTD-------TPLDELRNALTV 127

Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAG 164
               E+ I    D     + D AS  L+ IR++ R++ +   + ++ LLKK++ +     
Sbjct: 128 DKVFEKNIEKIFDENW-DVKDDASPALKSIRSDIREKELSLQKTVNRLLKKLSEEYL--- 183

Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
            + +   T+R  R+ + +KA HK  +  G   + SS+G T ++EP   +E NN  + L  
Sbjct: 184 -VQEEYFTQRDGRIVLPVKAEHKRHVK-GFIHSESSTGQTVYIEPAEILELNNDILSLKF 241

Query: 225 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 284
           +E  E   IL ++T +IA   +E+    + +  +D  FARA +A  + G  P        
Sbjct: 242 AEKREIEKILLVITRQIAAKSQELLDAYNIITALDTLFARAKYALEIIGSIP-------- 293

Query: 285 SFDSSINIEGI--KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
           +FD+   IE I  +HP+LL    + L   ++                           VP
Sbjct: 294 TFDNGKPIELIDARHPILL----KKLGFEAT---------------------------VP 322

Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
           +++K+  + +++V+TGPN GGKT ++KT+GL  LM+++G+ +P      L  F+ +L DI
Sbjct: 323 LNLKI-TDQKILVLTGPNAGGKTVALKTIGLLVLMAQSGIPIPCHPDSNLHIFEKVLVDI 381

Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
           GD+QS+E +LSTFS H++ I  ILE  +  +LVL+DE+G+GTDP EG A+AT IL  LRD
Sbjct: 382 GDYQSIEDDLSTFSSHLTNIKSILENANESTLVLLDEVGTGTDPVEGAAIATGILISLRD 441

Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
           +  L V TTH+  L  + ++  +F+N + EF  E L+PTYR   G  G S A  IA  IG
Sbjct: 442 KGALVVATTHHGSLKLIANQLDKFQNCSMEFDSEELKPTYRFNQGMPGSSYAFEIATRIG 501

Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
           FD K I  +++ +     +  + +  E    + ++   L +Q       +  +  L    
Sbjct: 502 FDEKFIDLSKRYI-----DSDKTKIEEFLIDIEKKSHDLRNQIHNLELENLRLKSLANLY 556

Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
           +D+   L+++   +     ++  Q+ N     ++  +++    +R + AD+   +IK+ +
Sbjct: 557 QDKINKLEKQKKEI----LEEAHQKANILLSDVNRKIENAIKNIRQSRADK--EVIKKEK 610

Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
           S I  + +      + S +E  +SS+    G+ V +K     +  + E+  D D  L+  
Sbjct: 611 SEIETVKKKTLSYLEKSRTE-ESSSYKLNVGDYVSIKGTT-SVGVLDEIDEDKDKALITI 668

Query: 703 GKMRVRVKKNNIRPIPNS 720
           G ++++ K +++ P   S
Sbjct: 669 GSLKIKAKYSSLVPAKKS 686


>gi|315641294|ref|ZP_07896371.1| DNA mismatch repair protein MutS [Enterococcus italicus DSM 15952]
 gi|315483061|gb|EFU73580.1| DNA mismatch repair protein MutS [Enterococcus italicus DSM 15952]
          Length = 797

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 184/573 (32%), Positives = 286/573 (49%), Gaps = 82/573 (14%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           +E+IA  L     G  L+  E+  + R L + N V    +E  EL+ D    +  L + +
Sbjct: 78  LENIAPHLKRIEIGADLNGLEVAQIARVLSSTNQVSAFFSELQELEID----FHRLYDWV 133

Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN----LDSLLKKVAAQ 159
           +    L EL +++   +D    +  D AS +L+ IR   +R  +N    LD L++   A+
Sbjct: 134 EQLVVLPELTKQMTRAVDEDGRVT-DEASPELKGIRQAIRRMEQNIREALDQLVRGSHAK 192

Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
                 +   L+T R  R  + +K  ++ +   G+  + S+SG T F+EPK  VE NN  
Sbjct: 193 Y-----LSDALVTMRNDRYVLPVKQEYRGIF-GGVVHDQSASGQTLFIEPKQIVELNN-- 244

Query: 220 VRLSNSEIAEETA---ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
            RL   +IAE+     ILS L+A +    REI +    + + D+  A+A + + M  + P
Sbjct: 245 -RLRQQQIAEKNEVARILSELSALLVPHRREIAHNSYVLGQFDVMNAKARYGKLMKAIVP 303

Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
            +S       D  + +   +HPL+                       + E+ V +     
Sbjct: 304 TMS------IDREVQLLKARHPLI-----------------------DQEVVVAN----- 329

Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
                  DI +  + + +VITGPNTGGKT ++KTLGL  LM++AGL +P +   ++  F 
Sbjct: 330 -------DIMIGKDYQAIVITGPNTGGKTITLKTLGLLQLMAQAGLPIPVEEGSQIGVFA 382

Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
            I ADIGD QS+EQNLSTFS H++ IV IL+ +  +SLVL DE+G+GTDP EG ALA +I
Sbjct: 383 EIFADIGDEQSIEQNLSTFSSHMTNIVSILDKIDEKSLVLFDELGAGTDPQEGAALAIAI 442

Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
           L  +  +    + TTHY +L        +  NA+ EF ++TL PTYR+L G  G SNA  
Sbjct: 443 LDAVGAKSSYVMATTHYPELKIYGYNRAKTINASMEFDVDTLSPTYRLLIGVPGRSNAFE 502

Query: 517 IAKSIGFDRKIIQRAQKL-------VERLRPERQQHRKS------ELYQSLMEERRKLES 563
           I+K +G D  II+ A+++       +  +  + +  RK       EL Q L +E  KL+ 
Sbjct: 503 ISKRLGLDTTIIEEAKQIMSGESQDINEMIADLENQRKMTETEYLELRQQL-QESEKLQK 561

Query: 564 QARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
           +   A  L       Y+E +DE     ++A  L
Sbjct: 562 ELTKATEL------FYQERDDELAKARKKANEL 588


>gi|427439526|ref|ZP_18924181.1| DNA mismatch repair protein MutS [Pediococcus lolii NGRI 0510Q]
 gi|425788362|dbj|GAC44969.1| DNA mismatch repair protein MutS [Pediococcus lolii NGRI 0510Q]
          Length = 514

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/489 (32%), Positives = 251/489 (51%), Gaps = 48/489 (9%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           +EDI   L       +L+  EI  + R LRA   V     +      D+      L  ++
Sbjct: 69  LEDIDEPLQRLKIDAILNGREIAQIGRVLRATREVINFFADLP----DTEVTVETLNGVV 124

Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
                + E+EE++   I+    + L+ AS +L  IRA   R    +   ++K   +  QA
Sbjct: 125 DQLETIPEIEERLNSSIEGNGHL-LNSASSELRRIRAAITRVEGEIRQRMEKFT-RGSQA 182

Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
             + +P++T R  R  + ++A  +     G+  + SSSG T ++EP+  V+ NN   +  
Sbjct: 183 KYLSEPIVTIRSERYVIPVRADSRSRF-GGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQ 241

Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
            +E+ EE  IL  L+A IA     +K     +  +DL  A+A +A  +    P       
Sbjct: 242 VAEVHEEQRILQELSALIAPYVDTLKDNSKVLGHLDLLNAKAQYAHKLKATEP------Q 295

Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
           +S ++ IN+   +HPL+               +P K                     VP 
Sbjct: 296 ISTNNRINLRQARHPLI---------------DPKKV--------------------VPN 320

Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
           DI++  E   +VITGPNTGGKT ++KT+GL  LM+++G+++PA  +  +  F+ I ADIG
Sbjct: 321 DIRLGGEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGMFIPANENSTVRVFEEIFADIG 380

Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
           D QS+EQNLSTFS H+   + ILE ++  SL L DE+G+GTDP EG ALA +IL  +R R
Sbjct: 381 DEQSIEQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGTDPKEGAALAIAILDRVRQR 440

Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
              ++ TTHY +L     + +   NA+ EF ++TL+PTY++L G  G SNA  I++ +G 
Sbjct: 441 GAASITTTHYPELKTYGYERSGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISRRLGL 500

Query: 524 DRKIIQRAQ 532
           D  II +A+
Sbjct: 501 DEDIITQAR 509


>gi|414084186|ref|YP_006992894.1| mutS domain V family protein [Carnobacterium maltaromaticum LMA28]
 gi|412997770|emb|CCO11579.1| mutS domain V family protein [Carnobacterium maltaromaticum LMA28]
          Length = 634

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 164/517 (31%), Positives = 258/517 (49%), Gaps = 61/517 (11%)

Query: 25  NQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT 83
           N+T  A A++ ++  +    +  I   +     G LL  S +  V   LR+   + ++  
Sbjct: 48  NETEEARALLDAKLTMPFMGLSSIDVFMEQLEKGLLLEASSLIDVADFLRS-GRMIRRFM 106

Query: 84  EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR---A 140
           E  E    +L  Y+      ++ +  TE+E++I F I      + D AS++L  IR   A
Sbjct: 107 EKYESLAPTLTMYA------RSISEFTEIEDEIYFSIKNGQ--VADEASKELRRIRRLIA 158

Query: 141 ERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
           E++  +E  L   LK    Q      I +  ++K+  R  + IKA++K  +  G  +  S
Sbjct: 159 EKESKIEERLSKFLKNKDNQ----KQIQEFFVSKKNERFTIPIKAAYKNQVA-GTIIETS 213

Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
           S G T F+EP    + N+    L   E  E   IL+ L+  I ++   I+  ++ + E D
Sbjct: 214 SKGTTVFIEPTAVTKLNDELAILKVEESTEIYQILATLSGLILENLVPIQLNLETIAEYD 273

Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
           + FAR  +++ + GV P L+ + ++   +++      HPL+  ++               
Sbjct: 274 MIFARGKYSRLIQGVTPKLNQRGYIHLVNAV------HPLIEANA--------------- 312

Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
                                VP++  V  + R ++ITGPN GGKT  +KT+GL +LM+ 
Sbjct: 313 ---------------------VPLNFTVGEDYRGLIITGPNAGGKTVVLKTVGLLALMTL 351

Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
            G+ LPA     +  F+ I  DIGD QSLE  LSTFS HI  I DI+++  R SLVL DE
Sbjct: 352 LGIQLPADEGTEMGLFEGIFVDIGDSQSLENALSTFSSHIQNIADIMQVAPRNSLVLFDE 411

Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
           IGSGT+P+EG ALA +IL+    R  + V TTHY ++    +    F NAA  F   TL 
Sbjct: 412 IGSGTEPNEGAALAIAILEEFYQRGNIVVATTHYGEIKRYSEIHPDFINAAMAFDQATLT 471

Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           P Y++L G +G+SNAL IAK +     +IQ+AQ+ +E
Sbjct: 472 PLYQLLMGESGESNALWIAKKMNLKEHVIQQAQRYME 508


>gi|317121678|ref|YP_004101681.1| MutS2 family protein [Thermaerobacter marianensis DSM 12885]
 gi|315591658|gb|ADU50954.1| MutS2 family protein [Thermaerobacter marianensis DSM 12885]
          Length = 885

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 173/534 (32%), Positives = 253/534 (47%), Gaps = 72/534 (13%)

Query: 39  LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
           + L+ + DI   L  A  G +LSP E+ AV  T R    +   L          L R   
Sbjct: 63  IPLAGLADIRRPLQRAAKGGILSPEELLAVAGTARGARRLRAFL----------LNREHA 112

Query: 99  LLELLKNCNFLTE---LEEKIGFCI--DCKLLIILDRASEDLELIRAERKRNMENLDSLL 153
              L      L     LEE +   I  D +   + D AS  L  +R    R + +L+  +
Sbjct: 113 YPRLAARAARLVPQPALEEAVAAAIGDDGR---VRDEASPRLASLR----RRLADLEEAI 165

Query: 154 KKVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 209
           ++   ++ +    AG + +PL+T+RR R  + +KA  +  +P G+  + S+SGAT F+EP
Sbjct: 166 RRRLEEMIRSPHWAGALQEPLVTQRRGRFVLPVKAEARAQVP-GVVHDQSASGATLFIEP 224

Query: 210 KGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 269
              VE  N        E  E   IL  LT  +A +  E+   ++ + ++D   AR   A 
Sbjct: 225 MAVVELGNRLREAEAEEQEEVERILGELTRMVAAAGEELAATLEELADLDAIVARGRLAL 284

Query: 270 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
            M    P    +  V    +      +HPLL                             
Sbjct: 285 AMRAERPETLDRPRVDLKRA------RHPLL----------------------------- 309

Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
                G    P+ + +        +VITGPNTGGKT ++KT+GL +LM +AGL++PA   
Sbjct: 310 -----GPGAVPIDVWLGEGAGFDALVITGPNTGGKTVTLKTVGLLALMHQAGLHVPAAPG 364

Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 449
             L  F  I  D+GD QS+EQ+LSTFS H+S IV         +LVL+DEIG+GTDP EG
Sbjct: 365 SALGVFPQIFCDVGDEQSIEQSLSTFSSHMSAIVGFARAARPGALVLLDEIGAGTDPDEG 424

Query: 450 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
            ALA ++L++ R R  L V TTHY+ L     +    ENA+ EF  ETLRPTYR+  G  
Sbjct: 425 AALAIALLEHFRRRGCLVVATTHYSALKAYAYQQPGVENASVEFDAETLRPTYRLWIGLP 484

Query: 510 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES 563
           G S AL IA+ +G    I+QRA++++         HR  EL  ++  +RR + +
Sbjct: 485 GKSMALAIAQRLGLPEPILQRAREVM-----GAGAHRVEELIAAMEADRRAIAT 533


>gi|251781073|ref|ZP_04823993.1| DNA mismatch repair protein [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243085388|gb|EES51278.1| DNA mismatch repair protein [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 635

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 184/638 (28%), Positives = 312/638 (48%), Gaps = 87/638 (13%)

Query: 1   MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQL 59
           +G  ++ K  IP   +L++  ++LN+TS    ++  S  + L  I DI  +LN    G +
Sbjct: 26  LGKNLIDKL-IP-STNLKQVNRMLNETSEGRRLIDASYHMPLEGIFDINSLLNKMEKGAV 83

Query: 60  LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
           L PSE+  +   LR    V K   +  E    +L  Y       +N   L  +EE+I   
Sbjct: 84  LEPSELITIGDFLRGCRKV-KLFIKDKEGYAPTLSSYG------ENITELQYIEEEI--S 134

Query: 120 IDCKLLIILDRASEDLELIR-----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
           I  K  +I   A+++L+ IR      E K N E L+  +K  + + +    + +  +++R
Sbjct: 135 ISIKGTVIDSNATKELKKIRKHIDLCEGKIN-EKLEKFIKSPSNREY----LQEAFVSQR 189

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R  V IKAS+K  +   I + VSS G T FME     ++      L   E  EE  IL
Sbjct: 190 NGRYTVPIKASYKNQVSGSI-VEVSSKGNTVFMELNIISKYTVELASLRGEESIEEYKIL 248

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
           + LT  I    +E+K  ++ + E D+  A+A +++ + GV P L++         INI  
Sbjct: 249 ATLTEMIFSRIKELKVNVEVISEYDMILAKAKYSKDIKGVKPKLNNYGF------INIVD 302

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
            ++PL+  S                                     +P+++K+  + R +
Sbjct: 303 GRYPLIKNS-------------------------------------IPLNLKIGEKYRSL 325

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
           +ITGPN GGKT  +KT+G+ ++  ++G ++ A  +  +  FD I  DIGD QS+E +LST
Sbjct: 326 IITGPNAGGKTVVLKTVGILTMAIQSGFHISASENSEMAVFDNIFVDIGDDQSIENSLST 385

Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
           FS H+S +  IL   ++ +L+L DEIGSGT+P+EG ALA +IL+    +  + V +THY 
Sbjct: 386 FSSHVSNLSRILRESTKNTLLLFDEIGSGTEPNEGAALAIAILEEFYKKGCITVASTHYG 445

Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
           ++         FENAA EF  +TL P YR+  G +G+SNAL IAK +G D  II R+++ 
Sbjct: 446 EIKNFSYNHPHFENAAMEFKKDTLEPMYRLNIGKSGESNALYIAKKMGIDDVIIDRSKRY 505

Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY-REIEDEAKDLDRRA 593
                      +  E    +++ R+ L+++     S +  I++ Y  +  D+   LD++ 
Sbjct: 506 F----------KSKEYNYEIIDSRKLLKNKTENENSGYENIINEYDYKTGDKVLLLDKKV 555

Query: 594 AHLKAKETQQVQQ----------ELNFAKVQIDTVVQD 621
           + +  K   +             E+NF +++++   ++
Sbjct: 556 SAVVYKTKDRFNNIVVFLNNEFVEVNFKRLKLEFTAEE 593


>gi|347542281|ref|YP_004856917.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
           SFB-rat-Yit]
 gi|346985316|dbj|BAK80991.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
           SFB-rat-Yit]
          Length = 783

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 218/736 (29%), Positives = 351/736 (47%), Gaps = 102/736 (13%)

Query: 12  PFGKSLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
           PF  ++EE  + LN+TS A+  ++   L +   ++D+   L     G  +S  EI  +  
Sbjct: 36  PFS-TMEEVIRNLNETSEAVEFIKEFGLPNFVGLDDVYPYLEKIDKGGSVSIKEIYKIGT 94

Query: 71  TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI-DCKLLIILD 129
           TLR +  V   L+  + +    L  Y        N +    LE++I   I D +   I D
Sbjct: 95  TLRCIREVKDYLSNRSLI---YLNYY------YDNISTFKYLEDEIFKTIKDGEE--ISD 143

Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHK 187
            ASE+L  IR E    + +  + +K+  ++I +     + + + T R  R C+ +KA +K
Sbjct: 144 FASENLFKIRKE----LRSKTAAIKRKLSEILKTYSKYLQENIFTVRGDRYCIPVKAEYK 199

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +  GI  N SSSG+TYF+EP   V  NN    L  +E  E   IL L+  +I  S   
Sbjct: 200 SQIQ-GIVHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSIDS 258

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           I   +  V  ++  F +  +A  +DG+ P +S +  +   S+      +HPL+   S+  
Sbjct: 259 IYLSIKIVYFLEFIFGKGNYAIEIDGIKPDISDEEDIYLISA------RHPLIDRESV-- 310

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                                            VP+++    + + ++ITGPNTGGKT +
Sbjct: 311 ---------------------------------VPLNLNFMSDRKAIIITGPNTGGKTVT 337

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KTLGL  LM+ +GL++PA    ++ + + I ADIGD QSLEQNLSTFS HI  I++I  
Sbjct: 338 LKTLGLMHLMAHSGLFIPAYEGSKIMFLNEIFADIGDEQSLEQNLSTFSSHIKNIINITN 397

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
            V  ++L+L+DE+GSGTDP EG ALA SI+++  +     + TTHY+ L          E
Sbjct: 398 NVKDKTLILLDEVGSGTDPEEGAALAISIIEHFINSGCKLMGTTHYSQLKTYAINSEDIE 457

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           NA+ EF ++TL+PTYR+  G  G SNA  IA S+G +  II+ A+K              
Sbjct: 458 NASVEFDVKTLKPTYRLNVGIPGKSNAFIIADSLGMNSSIIESAKKY------------- 504

Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAK----DLDRRAAHLKAKE 600
                 L  +  KLE+  +T      E +   REIE   +E K     L +R   ++ ++
Sbjct: 505 ------LSGDTIKLENIIKTLEEKTTEAVKNNREIEILREENKILNEKLKKRIDGIENEK 558

Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL----IKESESAIAAIVEAHRPDD 656
            + ++     A   I    ++ +  L+  ++ E+N +    IK+ ESA   I    + D+
Sbjct: 559 FRIIESAKEDAYKIITNAKREIDQALKMINSLEMNGIDLSSIKDLESARREI--KKKIDE 616

Query: 657 DFSVSE----TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
              + E     N S    +F  G    +K +G  + T++  P     VLVQ G +++ + 
Sbjct: 617 QNKIKEEKSLKNNSEVNIEFKSGMSAFLKRIGQNV-TILGNPDSKGNVLVQAGILKLTIN 675

Query: 711 KNNIR-PIPNSKRKNA 725
            + +  PI +   K A
Sbjct: 676 TSELESPIKDKSTKLA 691


>gi|427440662|ref|ZP_18924934.1| DNA mismatch repair protein MutS2 [Pediococcus lolii NGRI 0510Q]
 gi|425787369|dbj|GAC45722.1| DNA mismatch repair protein MutS2 [Pediococcus lolii NGRI 0510Q]
          Length = 636

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/511 (32%), Positives = 250/511 (48%), Gaps = 53/511 (10%)

Query: 26  QTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
           +T  A  +++S Q + L  ++ I  ++N    G +L+P+E+      LR+ N + KK  E
Sbjct: 50  ETKEARIIIESGQYIPLLGLKQINRLMNKIDKGVILTPAELIEFADFLRS-NRMLKKFFE 108

Query: 85  AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
                  +L +YS  L      +  T  EE I   +D     +LD AS DL   R + K 
Sbjct: 109 KNRYQTPTLYKYSQAL------SKFTTTEEHIYQKVDD--YEVLDDASRDLRKARRQFKT 160

Query: 145 NMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 204
             + +   L K          I   LI +++  + V IK S+K+ +P G  ++ SS+G T
Sbjct: 161 IKDEIQDKLMKFLRSPKNKPMIQDVLIVEKQGSITVPIKVSYKFKVP-GTIVDQSSNGQT 219

Query: 205 YFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFAR 264
            ++E     + N           +E   IL+ LT E+++    I   +D V   D+ FAR
Sbjct: 220 VYIELDLVAKLNEKRAFQKAVIESESYQILAELTGELSEQRTSILNAIDAVTMFDIIFAR 279

Query: 265 AGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVEN 324
           A +++   G+ P ++          INI   +HP L+G+                     
Sbjct: 280 AKYSREYGGITPQINQAER------INIIQGRHPFLVGA--------------------- 312

Query: 325 SEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 384
                          PVP+D ++  + R ++ITG N GGKT  MKT+GL +LM+ AGL +
Sbjct: 313 ---------------PVPLDFQLGKDYRGLIITGANAGGKTIVMKTVGLLTLMAMAGLQV 357

Query: 385 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 444
           PA+    L  FD +  DIGD Q++E  LSTFS H+  I  I++   R +LVL+DE+GSGT
Sbjct: 358 PAQAGTELAVFDQLFVDIGDEQNIENQLSTFSAHMKNIAKIVQKAGRNTLVLLDELGSGT 417

Query: 445 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 504
           DP+EG  LA +IL+ L  +  L V TTHY ++     K   F  AA +F  ETL P Y +
Sbjct: 418 DPNEGAGLAIAILEDLYRKGALIVATTHYGEIKNFTKKHADFTPAAMKFDRETLTPKYVL 477

Query: 505 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
             G  GDS AL IAK +   + +IQRA K +
Sbjct: 478 QVGEVGDSQALWIAKKMRMPKVLIQRADKYI 508


>gi|392988863|ref|YP_006487456.1| MutS2 family protein [Enterococcus hirae ATCC 9790]
 gi|392336283|gb|AFM70565.1| MutS2 family protein [Enterococcus hirae ATCC 9790]
          Length = 786

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQTVREQLDGIVRGKNAKY-----LSDTIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  VE NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFVEPKQIVELNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+     EI +    + ++DL  A+A F + +  + P +S ++HV    +      +HPL
Sbjct: 257 ELVPHRHEIIHNAYVIGKLDLMNAKARFGKELKAIVPAISVENHVILKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  E + +VITGP
Sbjct: 311 I-----------------------DQEKVVAN------------DISIGKEYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM ++GL +P     ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQSGLPIPVDEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILAHVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D+ +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDQSVINEAKQLM 511


>gi|260584040|ref|ZP_05851788.1| DNA mismatch repair protein MutS [Granulicatella elegans ATCC
           700633]
 gi|260158666|gb|EEW93734.1| DNA mismatch repair protein MutS [Granulicatella elegans ATCC
           700633]
          Length = 785

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 199/639 (31%), Positives = 319/639 (49%), Gaps = 101/639 (15%)

Query: 10  QIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILN-----SAVSGQLLSPS 63
           Q+P   + ++ +  + +T  A+ +++  Q + +  +EDI+  +      + ++G+ LS  
Sbjct: 33  QLPIETNAKKIRHKIEETRDAVTLLRLKQGIPIPKLEDISVSIKRLEVEAGLNGRELS-- 90

Query: 64  EICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--D 121
           EI  V +T   V N ++K+ E  E+  D L       +L++   +L E+ +++   I  D
Sbjct: 91  EILKVLQTTNQVANFFEKVKEE-EITLDRLP------QLVEKLEYLPEISKQLQLSIRED 143

Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
                +LD AS  L+ IR    R  + +   L       + A  +   LIT R  R  V 
Sbjct: 144 G---YVLDDASIPLKGIRQGISRTEQEIKGQLDTYVTGKY-AKYLTDSLITIRNDRYVVP 199

Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
           +KA +K     GI  + S++G T FMEP+  V  NN   +L + ++ E+  +  +L    
Sbjct: 200 VKAEYKSTF-GGIVHDQSATGQTLFMEPQAIVNLNN---KLRDYQLQEKKEVERILLELS 255

Query: 242 AK------SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
            K      S  +  Y++ R   +D+A A+A +A+ +    PI+  ++HV+      I   
Sbjct: 256 EKLMPHTPSLTQNHYVLSR---LDIANAKALYAKQIKANEPIIDEENHVA------IWQA 306

Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
           +HPL+               +P KS V N                   DI +  E + +V
Sbjct: 307 RHPLI---------------SP-KSVVAN-------------------DIILGQEYQSIV 331

Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
           ITGPNTGGKT  +KT+G+  LM++ GLY+PA    R+  F  I ADIGD QS+EQNLSTF
Sbjct: 332 ITGPNTGGKTILLKTIGIIQLMAQMGLYIPALPDSRVGVFTQIFADIGDEQSIEQNLSTF 391

Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
           S H+S IV IL  +  +SLVL+DEIGSGTDP EG +LA +IL Y+  +    + TTHY +
Sbjct: 392 SSHMSNIVSILNKIDEKSLVLMDEIGSGTDPQEGASLAIAILDYIGTKQSYVIATTHYPE 451

Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           L           NA+ EF  +TL+PTYR L G  G SNA +I+  +G  + +I++A++ +
Sbjct: 452 LKVYGYNRVGTINASMEFDSDTLQPTYRFLLGVPGRSNAFDISARLGLPKVVIEQARQFI 511

Query: 536 --------------ERLRP---------ERQQHRKSELYQSL-MEERRKLESQARTAASL 571
                         ER R          ++Q    S+L ++L +E     E++AR     
Sbjct: 512 SVESQELNEMISDLERKRRIVDQEKSVIQQQLKESSQLLEALKLETENFKENKARLIEQA 571

Query: 572 HAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQEL 608
             +  +L  + +++A+ +  D RA  LK+KET   + EL
Sbjct: 572 KEKANELVAQSQEDAEKILSDIRAMQLKSKETVVKEHEL 610


>gi|227529705|ref|ZP_03959754.1| MutS family DNA mismatch repair protein [Lactobacillus vaginalis
           ATCC 49540]
 gi|227350371|gb|EEJ40662.1| MutS family DNA mismatch repair protein [Lactobacillus vaginalis
           ATCC 49540]
          Length = 784

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 214/702 (30%), Positives = 326/702 (46%), Gaps = 130/702 (18%)

Query: 72  LRAVNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEK--------------- 115
           L+ +    K+L   A L+G  L + + +L+  +   NF  E +E+               
Sbjct: 60  LKNIQPQLKRLRINANLNGTELAQITKVLQTSMSVKNFFAEFKEQQKVELRVINESVQQL 119

Query: 116 IGFCIDCKLLI--------ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----- 162
           I      K LI        + D AS  L  IR            L+ K  A+I Q     
Sbjct: 120 ITIPTITKRLIQSIDPDGRVTDEASTKLHGIR-----------QLISKTEAEIHQRMERF 168

Query: 163 -----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
                A  +   ++T R  R  V + A ++     G+  + S+SG T ++EP   VE+NN
Sbjct: 169 TQGKNAKYLSDAIVTVRNDRYVVPVLARYRNKF-GGVVHDQSASGQTLYIEPAAVVEYNN 227

Query: 218 MEVRLSNSEIAEETAILSLL---TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
              RL  ++I E+ AIL +L   +A I+    EI      +  +D   A+A FA+     
Sbjct: 228 ---RLRQAQIEEKQAILEVLAELSALISPYRSEIAANAKILGHLDFINAKARFARDHKDS 284

Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
            P+LS       D+ + I   +HPL+               +P K               
Sbjct: 285 LPLLSP------DNQVIIRQARHPLI---------------DPQKV-------------- 309

Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
                 V  DIK+  E + +VITGPNTGGKT ++KT GL  +M +AGL++PA+    +  
Sbjct: 310 ------VANDIKIGDEYQSIVITGPNTGGKTITLKTFGLIQMMGQAGLFIPAQEGSTIAV 363

Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
           FD I ADIGD QSLEQNLSTFSGH+  +  ILE ++  SLVL+DE+G+GTDP EG ALA 
Sbjct: 364 FDNIYADIGDEQSLEQNLSTFSGHMENVKSILERITSRSLVLLDELGAGTDPKEGAALAM 423

Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
           SIL Y+  +    V+TTHY +L           NA+ EF  ETL+PTY +L G  G SN 
Sbjct: 424 SILDYIASKGSTVVITTHYPELKVYGYDRPGTINASMEFDQETLKPTYHLLLGIPGRSNG 483

Query: 515 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 574
           + IA+ +G ++ +I  ++ LV     +  Q     +   L+E+R+     AR       +
Sbjct: 484 IEIAQRLGINQTVITESKSLVSEDSQDLNQ-----MIGELVEQRKA----AREEKERLEK 534

Query: 575 IMDLYREIE-DEAKDLDR---RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
           ++   RE + D    LDR   +   L AK   +   E++ AK + D ++     QL  + 
Sbjct: 535 LLVANREKQADLTNKLDRFNEQRDSLLAKARNEANHEVSMAKKKADRIIHHLR-QLEISQ 593

Query: 631 ADEI--NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 688
           A  +  N LI +++ A+ A+   HR D      + NT     +    +HV   GD  A +
Sbjct: 594 AGNVKENELI-DAQGALNAL---HREDPRL---KRNTVLRRAKEKHDLHV---GD--AVL 641

Query: 689 VEVPGDDDTVL---------VQYGKMRVRVKKNNIRPIPNSK 721
           V+  G    +L         VQ G +R+ + +N++  I + +
Sbjct: 642 VKSYGQQGELLSKRSKHKWEVQIGILRMEIDENDLEKISHKQ 683


>gi|392988507|ref|YP_006487100.1| MutS2 family protein [Enterococcus hirae ATCC 9790]
 gi|392335927|gb|AFM70209.1| MutS2 family protein [Enterococcus hirae ATCC 9790]
          Length = 632

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/513 (31%), Positives = 262/513 (51%), Gaps = 55/513 (10%)

Query: 26  QTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
           +T  A  +++SQ  +    +  I  + +    G LL+P+E+      LR+ + + ++  E
Sbjct: 48  ETKEARQILESQQHVPFMGLTRIDALTSQVKKGFLLTPTELIEYADFLRS-SRMIRRFFE 106

Query: 85  AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
             +     L  YS      KN   L+ +EE I   I  +   + D AS +L  +R + + 
Sbjct: 107 KNQYQTPLLHVYS------KNMPDLSMVEELIYQQIKNQK--VSDEASRNLRKVRKQLQL 158

Query: 145 NMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 204
             + +   L K          I + +I ++     + IKAS+K  +P G  +  S+ G T
Sbjct: 159 TEKEIQDRLLKFLRHPHNKEMIQEAMIVQKGDHYTIPIKASYKNKVP-GTIIEQSNKGTT 217

Query: 205 YFMEPKGAVEFNNMEVRLSNSE-IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
            F+EP  AVE  +M  +L  +E IAEE  +L+ LT  +A+ E+ I  +++ +  +D+ FA
Sbjct: 218 VFIEPT-AVEKASMNYQLLKAEEIAEEYQVLAYLTGALAEQEQAIDLIIETITRLDIIFA 276

Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
           R  +++ + GV P ++   +      I I+  +HPL+ G +                   
Sbjct: 277 RGKYSREIHGVTPRINQSEY------IKIKQGRHPLIQGKA------------------- 311

Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
                            VP+D ++  + R +VITG N GGKT  +KT+GL +LM+  GL 
Sbjct: 312 -----------------VPLDFELGKDYRGLVITGANAGGKTVVLKTVGLLTLMAMFGLQ 354

Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
           +PA     L  FD I  DIGD Q++E  LSTFSGH+  I ++L  VSR +LVL+DEIGSG
Sbjct: 355 VPAAEGTELAVFDEIFVDIGDQQTIENALSTFSGHMQNIAEMLRKVSRNTLVLLDEIGSG 414

Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
           T+P+EG ALA +I++ + ++  L V TTHY ++    +    F  AA  F  E L+P Y 
Sbjct: 415 TEPNEGAALAVAIMEAMYEQGALIVATTHYGEIKKFANDHEDFIPAAMAFDKEALKPKYL 474

Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           +  G TG+S AL IA+ +   + +I++AQ  ++
Sbjct: 475 LQVGETGESQALWIAQKMNMSQTLIEQAQYYIQ 507


>gi|221632685|ref|YP_002521906.1| MutS2 family protein [Thermomicrobium roseum DSM 5159]
 gi|254766609|sp|B9KYW4.1|MUTS2_THERP RecName: Full=MutS2 protein
 gi|221157216|gb|ACM06343.1| MutS2 family protein [Thermomicrobium roseum DSM 5159]
          Length = 792

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 179/519 (34%), Positives = 263/519 (50%), Gaps = 49/519 (9%)

Query: 23  LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
           LL  T  A  ++  +P   +    DI  ++ +A  G +L+P+++  V  TL A  ++ ++
Sbjct: 46  LLRVTREAARLLNERPSFTIGGFRDIRSVVQAAQRGNILAPADVRTVLDTLEAAASLRRQ 105

Query: 82  LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
                  D    +RY  L E +     L  L   +   I  +  + LD AS +L  IR  
Sbjct: 106 FMA----DERWSERYPALAEFVLAMVDLPGLRADLARSIGPRGEV-LDTASPELAAIRRS 160

Query: 142 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 201
            K   E L   L+++ A+  +A  I    +T R  R  + ++A  +  +P GI  +VS S
Sbjct: 161 LKEAHERLLERLRRLLAERQEA--IQDAYVTIRDGRYVIPVRADRRQAVP-GITHDVSGS 217

Query: 202 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 261
           G T F+EP   +E NN    L  +E  E   IL +LT  IA +  E+  +++    +DLA
Sbjct: 218 GQTLFVEPFEVLELNNRWRELQAAETREIERILRVLTQRIADAADELLQIVEAGAALDLA 277

Query: 262 FARAGFAQWMDGVCPILSSQSHVSFDSS-----INIEGIKHPLLLGSSLRSLSAASSNSN 316
            A+A  A  +D V P L   S  +         + +   +HPLL                
Sbjct: 278 LAKARLAYDLDAVEPELLEPSGPTVPEGHPFLRVRLRAARHPLL---------------- 321

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
               D   +               VPID+++    R++VITGPNTGGKT ++KT+GL +L
Sbjct: 322 ----DRRTA---------------VPIDVELGERFRILVITGPNTGGKTVALKTVGLLAL 362

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M++AGL++PA     L  F  I  DIGD QS+EQNLSTFS H+ RIV  L+     SLVL
Sbjct: 363 MAQAGLFIPAAPGSGLSVFPAIFVDIGDEQSIEQNLSTFSSHMRRIVATLQQADASSLVL 422

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
           +DEI +GTDP EG ALA +IL+ L +   L +VTTHY +L          ENA+ EF   
Sbjct: 423 LDEIAAGTDPQEGAALARAILERLLEIGALGIVTTHYPELKVFATGTPGLENASVEFDPV 482

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           TL PTYR+L G  G S+AL +A+ +G    +I RA++L+
Sbjct: 483 TLSPTYRLLVGLPGRSHALEVARRLGLPEDVIARARELL 521


>gi|430842214|ref|ZP_19460129.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1007]
 gi|430493295|gb|ELA69598.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1007]
          Length = 642

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 160/511 (31%), Positives = 255/511 (49%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S + K          I + +I ++     + IKAS+K  + DG  ++ S+ G T+
Sbjct: 161 EKEIQSKMLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTF 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            F++ ++G  P ++   H+       I+  +HP L                         
Sbjct: 280 KFSREINGSTPKINKSEHIV------IKQGRHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  V +D+++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVSLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|403387033|ref|ZP_10929090.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium sp. JC122]
          Length = 788

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 177/563 (31%), Positives = 289/563 (51%), Gaps = 68/563 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
           +L E ++ L +T  A  ++ ++   P +   I D+   +N A     L+  ++  +   L
Sbjct: 39  NLYEVKEHLEETKEAFKLLTTKGNPPFE--GIYDVREAINKAKKESSLTCEQLLRIASML 96

Query: 73  RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
           +   +  + ++   E +G     Y  L ++      + +LE++I   I  +  +  DRAS
Sbjct: 97  KCSRSFKEYISHKEEEEG-----YRVLEDICIGIVPIKKLEDEIFMAIVSEEEV-SDRAS 150

Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLL 190
           +DL  IR    R ++   S +K+    + +A    + + L T R  R  + ++A +K  +
Sbjct: 151 DDLYNIR----RKLKQKSSSVKEKVNSLLRANSKYLQENLYTIRGDRYVLPVRAEYKDQV 206

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
           P G+  + S++GAT F+EP   V  NN    L   E  E   IL LL+ ++  +   I+ 
Sbjct: 207 P-GLIHDQSATGATLFIEPMSLVNLNNEIRELFIKEKKEVERILRLLSKKVTNNIELIEN 265

Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
             + + E+D  FA+A +A  ++G+CP ++ +  +       IE ++HPL+    +     
Sbjct: 266 DANILWELDFIFAKAKYASEINGICPEINDKGIIDL-----IE-VRHPLIDAKVV----- 314

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                                         VP  + +  E   +VITGPNTGGKT ++KT
Sbjct: 315 ------------------------------VPNSVYLGREFTSLVITGPNTGGKTVTIKT 344

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           +GL  LM+ +G+ +PA+++  + +F  + ADIGD QS+EQ+LSTFS H++ IV I+E   
Sbjct: 345 VGLVHLMAMSGILIPARSNSVVSFFKNVYADIGDEQSIEQSLSTFSSHMTNIVGIIEEAD 404

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
             SL L DE+GSGTDP+EG ALA SIL+ L+ R    V TTHY++L     K    EN +
Sbjct: 405 ENSLCLFDELGSGTDPTEGAALAVSILENLKKRGCRVVATTHYSELKGYALKTLGVENGS 464

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKS 548
            EF++ETL PTY++L G  G SNA  I++ +G    II+ A++ +  + L  E       
Sbjct: 465 VEFNVETLSPTYKLLIGVPGKSNAFEISRRLGLPEYIIKDAKENISTDSLNFE------- 517

Query: 549 ELYQSLMEERRKLESQARTAASL 571
           EL QSL  +  K E+ AR A +L
Sbjct: 518 ELIQSLQAKSIKAENDARMAEAL 540


>gi|227552101|ref|ZP_03982150.1| MutS family DNA mismatch repair protein [Enterococcus faecium
           TX1330]
 gi|424762404|ref|ZP_18189913.1| MutS2 family protein [Enterococcus faecalis TX1337RF]
 gi|431033419|ref|ZP_19491265.1| MutS2 protein [Enterococcus faecium E1590]
 gi|227178767|gb|EEI59739.1| MutS family DNA mismatch repair protein [Enterococcus faecium
           TX1330]
 gi|402424629|gb|EJV56797.1| MutS2 family protein [Enterococcus faecium TX1337RF]
 gi|430564520|gb|ELB03704.1| MutS2 protein [Enterococcus faecium E1590]
          Length = 786

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/416 (35%), Positives = 221/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +P     ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D  +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511


>gi|423374704|ref|ZP_17352042.1| MutS2 family protein [Bacillus cereus AND1407]
 gi|401093992|gb|EJQ02078.1| MutS2 family protein [Bacillus cereus AND1407]
          Length = 633

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/521 (29%), Positives = 267/521 (51%), Gaps = 67/521 (12%)

Query: 24  LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIANTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDSAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                NM+++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNMDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAIEEYQILATLSGMVVENIYHIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +V      ++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGYV------HLVNCKHPLLSGK------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ ++    R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ +++  +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMLNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           ETL P Y+++ G +G+SNAL IA  +    ++++RA++ +E
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLKRAKEYME 508


>gi|218184860|gb|EEC67287.1| hypothetical protein OsI_34270 [Oryza sativa Indica Group]
          Length = 787

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 214/767 (27%), Positives = 365/767 (47%), Gaps = 80/767 (10%)

Query: 16  SLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAV----SGQLLSPSEICAVR 69
           S E+S++LL +T AA+ ++ S    +D S ++ +  ++ SA+     G ++   E  A+ 
Sbjct: 27  SYEQSRRLLEETGAAVRLIDSAGGGIDFSGLDTV--MVESAIHGVSGGAVIKGQEAMAIV 84

Query: 70  RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
             +  V ++   +  A + D DS +R   L E + + +    L + I   ID     I D
Sbjct: 85  SLMLFVESLQVTIKAAMKQDEDSHERLISLTETILDADINKSLVKSIQDVIDDDG-SIKD 143

Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL--ITKRRSRMCVGIKASHK 187
            AS +L   R + +     L  L+ K+         +      +     R C+ +     
Sbjct: 144 TASPELRRYREQVQVLESRLYQLMDKLVRNADNEASVSVLFHEVCIVNGRCCIKVTGDKS 203

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSER 246
               DG+ L+ S + A   +EP  AV  N+ E++ + + +A+ E   LS +T +I     
Sbjct: 204 SPF-DGLLLS-SGTDAGSMVEPIVAVPLND-ELQQARALVAKAELDALSKMTDKILLELD 260

Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS--------------------SQSHVSF 286
            I+ L+   +E+D   ARA ++   DG  P L                     S +H+S 
Sbjct: 261 NIRILLQATVELDKVAARAKYSIAYDGTYPDLYLPNFVNGTVSTATGGSISTISSAHLSK 320

Query: 287 DS-SINIEGIKHPLLLGSSLRSLSAASSN--------------------SNPLKSDVENS 325
            +  + +    HPLLL     +L  A  +                     + L SD++  
Sbjct: 321 KAWKLCMPNAYHPLLLQQHQENLHRAKKDVASATAEIRRRRIYGQDNVEEDQLASDLDLI 380

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
           ++ V  + K   D PVP+D  +   T V+VITGPNTGGKT S+KT+GLASLM+K GLY+ 
Sbjct: 381 KIRVSQMEK---DRPVPVDFFIAEGTTVLVITGPNTGGKTISLKTVGLASLMAKIGLYIL 437

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           A    ++PWF+ + ADIGD QSL Q+LSTFSGH+ +I  I    + +SLVL+DE+G+GT+
Sbjct: 438 ASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAWSTSQSLVLLDEVGAGTN 497

Query: 446 PSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDK---------DTRFENAATEFSL 495
           P EG AL  S+L+   +    L + TTH+ +L  LK +         +  FENA  EF  
Sbjct: 498 PLEGAALGMSLLESFAEAGSFLTLATTHHGELKTLKYRAHYIVHTFSNDLFENACMEFDE 557

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE-----RQQHRKSEL 550
           + L+PT+RILWG  G SNA+NIA+ +G    II+ +++L+     E            + 
Sbjct: 558 DNLKPTFRILWGIPGRSNAINIAERLGLPSDIIESSRQLLGTAGAEINALIMDMENFKQQ 617

Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL-- 608
           YQ  ++E +    Q++    LH  +    + I D      +R A + ++     +  +  
Sbjct: 618 YQHHLQEAQYYVMQSK---ELHNNLEVAQKNIIDHTSAQRKRKARVISEYAVMARSIIRK 674

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
            F + +   + +    + +    D+   L     ++  A+ +A   +   + +     + 
Sbjct: 675 KFQQFRESAIAKRVLEEEKAVQNDKPERLKDPEPTSTPAVKKAQNTNISMATTTEGEDNG 734

Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
            P+ G+ V+V  L ++ ATVV++    + V VQ G M++++K  +++
Sbjct: 735 IPEVGDLVYVPKLKNE-ATVVKIDSSKNEVQVQAGIMKLKLKFKDVK 780


>gi|257886737|ref|ZP_05666390.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
 gi|257822791|gb|EEV49723.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
          Length = 786

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/416 (35%), Positives = 221/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +P     ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D  +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511


>gi|431757245|ref|ZP_19545876.1| MutS2 protein [Enterococcus faecium E3083]
 gi|430619534|gb|ELB56361.1| MutS2 protein [Enterococcus faecium E3083]
          Length = 786

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/416 (35%), Positives = 221/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +P     ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D  +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511


>gi|257892933|ref|ZP_05672586.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
 gi|257829312|gb|EEV55919.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
          Length = 786

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/416 (35%), Positives = 221/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +P     ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D  +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511


>gi|154499931|ref|ZP_02037969.1| hypothetical protein BACCAP_03588 [Bacteroides capillosus ATCC
           29799]
 gi|150271529|gb|EDM98786.1| MutS2 family protein [Pseudoflavonifractor capillosus ATCC 29799]
          Length = 791

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 216/744 (29%), Positives = 352/744 (47%), Gaps = 99/744 (13%)

Query: 18  EESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           ++ Q+L  +T+AA+ M  ++  P  LS ++ +A  L  A  G  L+  E+  +   LRA 
Sbjct: 44  DDVQRLQAETTAAVNMTALRGSPA-LSGVKPVAASLQRADMGGALNTRELLDIAAVLRAA 102

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
            +   +   A E +G +   +  L   L    FL   E+KI   I  +  I  D AS +L
Sbjct: 103 RSA--RDYAAGENNGKTCIDH--LFASLTANRFL---EDKITGSILGENEIA-DSASPEL 154

Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
             IR   +     +  +L+K+ +   QA  + +P+IT R  R  V +++  K  +P G+ 
Sbjct: 155 ASIRRHIRATSAKVRDILQKLISS-SQAKYLQEPIITMRSDRYVVPVRSECKNDVP-GLV 212

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
            +VSSSG T+F+EP G V+ NN    L   E  E   IL+ L+A+ A  + +I    D +
Sbjct: 213 HDVSSSGGTFFIEPMGVVKANNELRELQADEEKEIDRILAELSADCAAHKEDIAQDYDLL 272

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
           + +D+ FARA  +  M    P + S+        I +   +HPLL               
Sbjct: 273 IMLDVIFARAKLSYRMRASEPKIVSRG-------ICLRQARHPLL--------------- 310

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
           +P K+                    V  D+ +  +   +VITGPNTGGKT ++KT+GL +
Sbjct: 311 DPNKA--------------------VANDLYLGGDFDTLVITGPNTGGKTVTLKTIGLLT 350

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM++ GL++P  +   +  FD +L+DIGD QS+ Q+LSTFS H+  IV IL+    ++L+
Sbjct: 351 LMAQCGLHIPVADDSTVMIFDRVLSDIGDEQSIAQSLSTFSSHMVNIVGILKEADDKTLI 410

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DE+G+GTDP EG ALA +I++  R+   L   TTHYA+L          ENA+ EF +
Sbjct: 411 LFDELGAGTDPIEGAALAAAIIEQSRELGALVAATTHYAELKVYAMTTAGVENASCEFDV 470

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE------------ 541
            +L PTYR+L G  G SNA  I++ +G  +++I +A   +  E +R E            
Sbjct: 471 NSLAPTYRLLIGIPGKSNAFAISERLGLPKEVIDKASARIDAENVRFEDVITRLEQQRQQ 530

Query: 542 ----RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
               + Q RK          RR++E  ARTA           RE  D+   L++  A   
Sbjct: 531 MEQEKDQARKL---------RREMEDSARTA-----------REYRDK---LEKERAKAV 567

Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDD 656
            K   + +  L+ A+   D+V ++     R    +E    + E  + +   + +A     
Sbjct: 568 EKAQAEARAILDEARNTADSVFKELNEMRRRQRKEEDWQKVNEERAGLRQRLNQAEDALG 627

Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
                     +   Q G+ V +  +G   A V+ V   D ++ +Q G +++  K++ +R 
Sbjct: 628 ARPEEPAPPPTRPAQAGDTVELVKMGGTKAQVLAV-NKDGSLQLQAGILKITAKQDEVRV 686

Query: 717 I-PNSKRKNAANPAPRLRKQVCTC 739
              +  +K A     R  +Q+ T 
Sbjct: 687 TEEDGSKKQAQRIIHRAERQLRTV 710


>gi|431762509|ref|ZP_19551071.1| MutS2 protein [Enterococcus faecium E3548]
 gi|430625201|gb|ELB61851.1| MutS2 protein [Enterococcus faecium E3548]
          Length = 786

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/416 (35%), Positives = 221/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +P     ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D  +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511


>gi|94971325|ref|YP_593373.1| MutS2 family protein [Candidatus Koribacter versatilis Ellin345]
 gi|94553375|gb|ABF43299.1| MutS2 family protein [Candidatus Koribacter versatilis Ellin345]
          Length = 812

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 196/636 (30%), Positives = 313/636 (49%), Gaps = 89/636 (13%)

Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
           DRAS +L  IR E +R   ++ S L+    ++   G   + LIT R  R  + +KA  K 
Sbjct: 154 DRASSELHRIRREIERQKRHIQSSLQSFLRKLSDEGTAQEELITIRGDRFVIPVKAEQKR 213

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            + +G+    SSSG T F+EP   +E NN  VRL   E  E   IL+ ++  I +    +
Sbjct: 214 RV-NGVVHGASSSGQTVFVEPMETIEQNNDLVRLLEEEQEEIRRILAEMSRRIGEQSENL 272

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
            + +  + E++L FA+A FAQ  + V     +      +  + +E  +HPLL        
Sbjct: 273 LFALYVLAELELQFAKAKFAQEYECVAVKFLADGG---EDVLVLEKARHPLL-------- 321

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                N  P                KGI+   VP+ + ++   R ++I+GPNTGGKT S+
Sbjct: 322 ---ERNLRP----------------KGIA--VVPMAMHMDARHRQIIISGPNTGGKTVSL 360

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KTLGL +L+++AG+ +PA +   LP F  + ADIGD+QS+EQNLSTFS H++ I  I   
Sbjct: 361 KTLGLLALIAQAGVPVPA-DRAELPIFSSVFADIGDYQSIEQNLSTFSAHVTNIDLISHT 419

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
              +SLVL+DE+GS TDP EG ALA +I  Y R    L+V++TH+  L           N
Sbjct: 420 AGADSLVLLDELGSATDPEEGAALAVAIADYFRQIGCLSVISTHHTSLKVYAANTEGVLN 479

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           AA  F  +TL+PTY +  G  G S  +NIAK +G +  II+ +                 
Sbjct: 480 AAVGFDEQTLQPTYELRVGVPGASAGINIAKRLGLNSTIIEAS----------------- 522

Query: 549 ELYQSLMEERRKLESQARTAAS----LHAEIM---DLYREIEDEAKDLDRRAAHLKAKET 601
                    +R+L +QA+  A     LHAE+    D    I+   ++L R    L+A+  
Sbjct: 523 ---------KRQLSNQAQDVAKFLDRLHAELRAASDERASIKRTEEELVRERKRLEAEGQ 573

Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRD---ASADEI--NSLIKESESAIAAIVEAHRPDD 656
           ++ ++++   + ++D ++ DFE Q R+   A  D      L K++E  IA +    R   
Sbjct: 574 KEQREKIRDLEKKLDGLLHDFEYQAREMVQAVQDRAAQQKLSKDAERRIAKMRREFREQF 633

Query: 657 DFSVSETNTSS------FTPQF------GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
           D SV    T +        P+       G++V ++S+G +   V++  G  D   V+ G 
Sbjct: 634 DNSVVAHATGADQGDPNARPELVKHVSEGDRVKLRSMG-REGKVIKRLG-ADLFEVEIGV 691

Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQVCTCT 740
           M+++V + +I  + +   + +ANP    R +  + +
Sbjct: 692 MKMKVPREDIAEVTS---RPSANPVAAARAKGVSVS 724


>gi|225851083|ref|YP_002731317.1| MutS2 protein [Persephonella marina EX-H1]
 gi|225644908|gb|ACO03094.1| MutS2 protein [Persephonella marina EX-H1]
          Length = 777

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 175/543 (32%), Positives = 268/543 (49%), Gaps = 70/543 (12%)

Query: 44  IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
           IE+  G+L  ++   +LSP EI  + + L+   ++ K L+   + + +++Q   PL   L
Sbjct: 78  IEEAIGLL--SIEESILSPKEILDIGKILKISRDIKKVLSPYIK-ERENIQ---PLYRDL 131

Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
            +     E+E  I   ID   ++  D AS DL  IR   K   + L S+L+ +       
Sbjct: 132 FSSR---EIERIIEDSIDPSGMV-KDSASRDLLQIRKSIKEVEKTLISILENIINSHKYQ 187

Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
             I + +IT R+ R  + +K +    +  GI  + SSSG T ++EP   VE NN   RLS
Sbjct: 188 DVIQERIITVRKDRYVIPVKQNFSSKIK-GIIHDRSSSGQTVYIEPVNVVELNN---RLS 243

Query: 224 NSEIAEET---AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSS 280
           + +I E      IL  LT  +     +I+   D V+  D  +    F+    GV P +S 
Sbjct: 244 DLKIREHIEIRKILKFLTDILRNRLTDIRKTFDAVINFDYLYTVYKFSSEYKGVFPGVSD 303

Query: 281 QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFP 340
           Q        +N+   +HPL L +S                                 DF 
Sbjct: 304 Q--------LNLIEARHPLFLMNS--------------------------------KDF- 322

Query: 341 VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILA 400
           VP+DIK+E   + +VITGPNTGGKT ++KT GL S++ + G+ +P      +P FD + A
Sbjct: 323 VPVDIKIEKSKKGLVITGPNTGGKTVTLKTAGLLSMIFQTGIPIPVSEGSEIPVFDWVYA 382

Query: 401 DIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYL 460
           DIGD QS+EQNLST+S HI  I +ILE ++  SLVL+DE+  GTDP EG A+   I++ +
Sbjct: 383 DIGDMQSIEQNLSTYSAHIKNIQEILERITERSLVLLDELIPGTDPDEGSAIGIGIMEKI 442

Query: 461 RDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKS 520
           +++    ++TTH+  +      D  FE A+  F  E L PTY I + S G S A  IA+ 
Sbjct: 443 KEKNAYCMITTHFKQIKMFALSDDYFEVASVGFDRENLTPTYSIHYRSVGQSMAFYIAER 502

Query: 521 IGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYR 580
           +GFD  I+ RA++ +            SE    L E   KLE         H+E++ L +
Sbjct: 503 LGFDADILHRARRYL------------SESSLKLSEAIEKLERYKEAYEKEHSELVRLKK 550

Query: 581 EIE 583
           +++
Sbjct: 551 QLK 553


>gi|15644034|ref|NP_229083.1| DNA mismatch repair protein [Thermotoga maritima MSB8]
 gi|418044562|ref|ZP_12682658.1| MutS2 protein [Thermotoga maritima MSB8]
 gi|7387923|sp|Q9X105.1|MUTS2_THEMA RecName: Full=MutS2 protein
 gi|4981836|gb|AAD36353.1|AE001783_4 DNA mismatch repair protein, putative [Thermotoga maritima MSB8]
 gi|351677644|gb|EHA60791.1| MutS2 protein [Thermotoga maritima MSB8]
          Length = 757

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 204/678 (30%), Positives = 313/678 (46%), Gaps = 83/678 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           +  + DI+  +    SG  L P E+  V   L   + + KK  E  E        YS L 
Sbjct: 60  IKGLNDISQEVEKVKSGSPLEPWELLRVSVFLEGCD-ILKKEFEKRE--------YSRLK 110

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
           E     +   E  E++  CI+    I  DRAS  L  IR E+KR    L S +K+ A   
Sbjct: 111 ETFSRLSSFREFVEEVNRCIEQDGEIS-DRASPRLREIRTEKKR----LSSEIKRKADDF 165

Query: 161 FQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
            +     + + +   R  R    +KAS K  +  GI  ++SSSGAT F+EP   VE NN 
Sbjct: 166 VRTHSQILQEQMYVYRDGRYLFPVKASMKNAV-RGIVHHLSSSGATVFLEPDEFVELNNR 224

Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
              L   E  E + IL  LT  +     +++  ++ +   D  +AR  FA+  +G     
Sbjct: 225 VRLLEEEERLEISRILRQLTNILLSRLNDLERNVELIARFDSLYARVKFAREFNGTV--- 281

Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
                V   S I +   +HPL+    +                                 
Sbjct: 282 -----VKPSSRIRLVNARHPLIPKERV--------------------------------- 303

Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
             VPI++++    R  +ITGPN GGKT ++KT+GL + +  +G  LP      L  F  I
Sbjct: 304 --VPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELKVFPKI 361

Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
           +ADIG+ QS+EQ+LSTFS H+ +IV+I++    +SLV++DE+GSGTDP EG ALA +I++
Sbjct: 362 MADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALAIAIIE 421

Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
            L ++     VTTH   +           NA+ EF  ETL PTYR+L G  G S+A  IA
Sbjct: 422 DLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSHAFQIA 481

Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
           + +G D++II+ A     R R  R++     L +SL E+   LE + R       E M L
Sbjct: 482 EKLGLDKRIIENA-----RSRLSREEMELEGLIRSLHEKISLLEEEKRKLQKEREEYMKL 536

Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 638
             + E++ K L R       KE +++   +   K ++D  +    +  +  S DE+   +
Sbjct: 537 REKYEEDYKKLRRMKIEEFDKELRELNDYIRKVKKELDQAI----HVAKTGSVDEMREAV 592

Query: 639 KESESAIAAIVEAHRPD-DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 697
           K         +E  + D +   + E       P  G+ V ++  G  +  VVEV     T
Sbjct: 593 K--------TIEKEKKDLEQKRIEEATEEEIKP--GDHVKMEG-GTSVGKVVEV--KSGT 639

Query: 698 VLVQYGKMRVRVKKNNIR 715
            LV +G +R++V  + +R
Sbjct: 640 ALVDFGFLRLKVPVSKLR 657


>gi|319892134|ref|YP_004149009.1| Recombination inhibitory protein MutS2 [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161830|gb|ADV05373.1| Recombination inhibitory protein MutS2 [Staphylococcus
           pseudintermedius HKU10-03]
          Length = 782

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 204/694 (29%), Positives = 329/694 (47%), Gaps = 84/694 (12%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L+  E+ A++ TL  V N +K        D +++  Y  L   ++    LT L + I
Sbjct: 81  GGTLNVQELNAIK-TLIQVQNQFKTFYNQLVEDEETV-NYEILDGQMQQLPVLTHLYQSI 138

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
               D + L   D AS +L+ IR+   +  + + + L ++         +   ++T R  
Sbjct: 139 HQKCDTQDL--FDSASMELQAIRSRIAKTNQRVRAQLDRMVKSTSNQKKLSDAIVTVRNE 196

Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
           R  + ++A ++    +GI  + S+SG T ++EP   VE NN   RL + E  E   IL+ 
Sbjct: 197 RNVIPVRAEYRQDF-NGIVHDQSASGQTLYIEPSAVVELNNQISRLRSEEATEVQRILAE 255

Query: 237 LTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
           LTAE+A+       + ++V+  +D    +A +A  + G  P  + +  V    +      
Sbjct: 256 LTAEVAEEAEAC-LISEQVMGHLDFLIGKARYAAKIKGTKPTFAVERQVYLPKAF----- 309

Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
            HPLL                                     D  V   I+ E   + V+
Sbjct: 310 -HPLL-----------------------------------DRDTVVANTIEFESSIQTVI 333

Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
           ITGPNTGGKT ++KTLGL  LM+++GL +P  +  +L  FD +  DIGD QS+EQ+LSTF
Sbjct: 334 ITGPNTGGKTVTLKTLGLIILMAQSGLLIPTLDGSQLSVFDNVFCDIGDEQSIEQSLSTF 393

Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
           S H+  IV+ILE  + +SL+L DE+G+GTDPSEG ALA SIL ++     L + TTHY +
Sbjct: 394 SSHMKTIVNILEEANDKSLILFDELGAGTDPSEGAALAMSILDHVHGMGALVMATTHYPE 453

Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           L           NA+ EF ++TL PTY++L G  G SNA +I+K +G   KII  A+ ++
Sbjct: 454 LKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKRLGLGLKIINHAKSMI 513

Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
                        +  Q + E    LE  A+       E+  L RE      DL R    
Sbjct: 514 ------------GQDEQEINEMIASLEKNAKRVDDQRIELDRLVREASQIHNDLSRAYEQ 561

Query: 596 LKAKETQQVQQELNFAKVQIDTVVQ---DFENQLRDASADEINSLIKESESAIAAIVEAH 652
            +  E++ +++  + A  ++   ++   D    LRD   D+  + +KE E     I +  
Sbjct: 562 YQNMESRLIEEAKDKANQRVKAAMEEADDILKSLRDMR-DQKGAEVKEHE----LIDQRK 616

Query: 653 RPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
           R +D +       +    ++     G++V V S G K   V+EV  D++ V VQ G +++
Sbjct: 617 RLEDQYEAKSIKQNVQKQKWDEIKAGDEVKVLSYGQK-GEVLEVLSDEEAV-VQMGIIKM 674

Query: 708 RVKKNNIRPIPNSKRKNAANPAPRLRKQVCTCTS 741
           ++      P+ + ++K  A   P   K+V T T+
Sbjct: 675 KL------PLSDLEKKEKAKEQP---KKVVTRTN 699


>gi|418010214|ref|ZP_12649997.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           Lc-10]
 gi|410554421|gb|EKQ28397.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           Lc-10]
          Length = 786

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 213/744 (28%), Positives = 353/744 (47%), Gaps = 92/744 (12%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G  +VQ  Q P    +   Q L      A A+     + +  +E+I   L     G +L+
Sbjct: 27  GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
             E+ ++ R L+ V+ + K LT+   ++D      +  L  L ++   L +L  ++   +
Sbjct: 86  GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
           D    +  D AS  L  +R       E + S+  ++  ++       Q+  +  P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R  + +KA ++     G+  + S++G T F+EP+  V  NN       +E+AE   IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
           + L+ E+A    +IK     +   D   A+A  A+      P+      VS D+ + +  
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
            +HPL+               +PLK         VG+            DI +  + + +
Sbjct: 305 ARHPLI---------------DPLK--------VVGN------------DIPLGDKYQAM 329

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
           VITGPNTGGKT ++KTLGL  LM ++GL++PA +  R+  FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389

Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
           FS H+  IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL  + +     V TTHY 
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449

Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
           +L        +  NA+ EF  +TL+PTYR+L G  G SNA +I+  +G    I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPSVIVERAKSM 509

Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
           +         H  + +   L ++R+  E+       Q   A S+H E+   Y++   E +
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-R 563

Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIA 646
           D   + A  KA         ++ A+ + D +++   + QL +    + N LI    +A  
Sbjct: 564 DAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613

Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
           A+ + H+  P     +            G++V V S  D+  T++E   D     VQ G 
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671

Query: 705 MRVRVKKNNIRPIPNSKRKNAANP 728
           ++++V  + +  I  SK+  A  P
Sbjct: 672 LKMKVPTDELEKIKPSKQSAAQRP 695


>gi|256847954|ref|ZP_05553398.1| DNA mismatch repair protein MutS2 [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715014|gb|EEU29991.1| DNA mismatch repair protein MutS2 [Lactobacillus coleohominis
           101-4-CHN]
          Length = 791

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 155/483 (32%), Positives = 243/483 (50%), Gaps = 66/483 (13%)

Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
           +IT R  R  + ++A ++     G+  + S+SG T ++EP+  VE NN   RL  ++I E
Sbjct: 188 IITMRNDRYVIPVEAHYRSRF-GGVVHDQSASGQTLYIEPQNVVEINN---RLRQAQIEE 243

Query: 230 ETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
              +   L+ L+A IA   +EI      +  +D   A+A  A  M    P+++       
Sbjct: 244 RQEVRRVLAELSALIAPYRKEIANNERLLGHLDFVNAKARLATKMHATLPVIND------ 297

Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
           D  IN+   +HPL+               +P +                     VP DI+
Sbjct: 298 DGLINLRQARHPLI---------------DPQRV--------------------VPNDIQ 322

Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
           +  + R +VITGPNTGGKT ++KTLGL  LM ++G ++PA    ++  FD + ADIGD Q
Sbjct: 323 LGDQYRTIVITGPNTGGKTITLKTLGLIQLMGQSGFFIPANEGSQITIFDNVFADIGDEQ 382

Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
           SLEQNLSTFSGH+  +  ILE ++  SLVL+DE+G+GTDP EG ALA +IL  ++     
Sbjct: 383 SLEQNLSTFSGHMENVKRILEQITERSLVLLDELGAGTDPKEGAALAMAILNQIQQVGSE 442

Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
            V+TTHY +L     +  +  NA+ EF ++T +PTYR++ G  G SN + IA+ +G    
Sbjct: 443 VVITTHYPELKVYGFERPQTINASMEFDVDTFQPTYRLMLGVPGQSNGIAIAQRLGLAST 502

Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
           +I  AQ LV     +    + + +   L+E+R++        A L AE      ++E + 
Sbjct: 503 VINDAQSLV-----KDDSQKLNAMIGELVEQRKQARENQERLAKLVAENQQKATDLEQKL 557

Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF------------ENQLRDASADEI 634
              + +   L  K   Q   ++  AK + D ++               EN+L DA   ++
Sbjct: 558 NRFNEQRDDLYEKARMQANHQVADAKRKADRIIHHLRQMEVQRGTQIKENELIDAQG-QL 616

Query: 635 NSL 637
           N+L
Sbjct: 617 NAL 619


>gi|257888895|ref|ZP_05668548.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
 gi|257824951|gb|EEV51881.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
          Length = 642

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 161/511 (31%), Positives = 254/511 (49%), Gaps = 58/511 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDTLTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S L K          I + +I ++     + IK S+K  + DG  ++ S+ G T 
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKVSYKNKV-DGTIIDESNKGTTV 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+E     + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIELTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            F++ ++G+ P ++   H+       I+  +HP L                         
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       D  VP+DI++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PDHAVPLDIEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD +  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
            G TG+S AL IA  +    K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508


>gi|219848614|ref|YP_002463047.1| MutS2 family protein [Chloroflexus aggregans DSM 9485]
 gi|219542873|gb|ACL24611.1| MutS2 family protein [Chloroflexus aggregans DSM 9485]
          Length = 820

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 217/748 (29%), Positives = 346/748 (46%), Gaps = 107/748 (14%)

Query: 17  LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           L E ++    T+ A  +++  P L +    D+    + A  G +L  + +  +  TLR+ 
Sbjct: 42  LNEVRRRQALTAEARLLLEEWPDLTIGGARDVRRSAHHAARGGMLDGTTLRDIAATLRSA 101

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASE 133
             + ++L+    LD     R+  L +L      L  L + I   I  D +   +LD AS 
Sbjct: 102 ATLRQRLSR---LD----DRFPNLRDLGYTLPALPHLIDAIEQAIGDDGQ---VLDSASP 151

Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
            L  +R E +     L   L+ +      A  + +P+IT R  R  + +KA H+  +  G
Sbjct: 152 TLARLRHEVRVAFNRLQERLQSMIHSPTLAAALQEPIITVRNGRYVIPVKAIHRREV-RG 210

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           +  + S SGAT ++EP   VE NN    L ++E  E   IL  L+ ++ ++   I   ++
Sbjct: 211 LVHDQSGSGATLYIEPLAIVELNNRWRELQSAEAEEVQRILGALSEQVGEAVSAIVSTVN 270

Query: 254 RVLEIDLAFARAGFAQWMDGVCPIL---SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
            +  +DL FA A +A       P +         S +  + +   +HPLL          
Sbjct: 271 MLAALDLVFALARYAIATRSTAPEIVDWRPDDPPSTEPPLRLIRARHPLL---------- 320

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                                      D  VPID+ +     +++ITGPNTGGKT ++KT
Sbjct: 321 -------------------------PPDKVVPIDLWLGGTFSILLITGPNTGGKTVALKT 355

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
            GL +LM++AG+ +PA    RLP F  I ADIGD QS+EQ+LSTFS H++ I+ +L+ ++
Sbjct: 356 TGLLALMAQAGMQIPADQPSRLPVFQYIFADIGDEQSIEQSLSTFSSHMANIIRVLQTLT 415

Query: 431 R-------------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
                                +LVL DE+G+GTDP EG ALA +I+  L +   LAV TT
Sbjct: 416 EAQSFPAAPTDQALFDYRRPAALVLFDELGAGTDPVEGSALARAIIGRLLELGVLAVATT 475

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY +L          ENA+ EF +ETL PTYR+  G  G SNAL IA  +G D  +I++A
Sbjct: 476 HYPELKAFAYATPGVENASVEFDVETLAPTYRLSIGVPGHSNALAIAARLGLDPALIEQA 535

Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
           +  +     +R + +  +L   +  ER      A T A   AE      E+  +A+    
Sbjct: 536 RSFI-----DRNEAQVEDLLAGIQRER-----AAATEALQRAE------ELRADAEKYRA 579

Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL------IKESESAI 645
           R A  +     + +  L  A+ +I+  +++   QLR    +E  S+      ++E+E  +
Sbjct: 580 RLAAEQQAFAAEREVALAAARQEIEAELREVRQQLRRLR-EEYRSVSISRQWLEEAEKRL 638

Query: 646 AAIVEAHRPDDDFSVSETNTSSFTP------QFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
           AA  E  +   +    +   S+  P      Q G+ VHV S+G     ++ +  DD+T  
Sbjct: 639 AATAEQAQQATERLQRQMVPSAPPPPAERPLQVGDTVHVASVGLN-GEIMAIDTDDETAT 697

Query: 700 VQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
           VQ G  R+ VK + +      KR  AA+
Sbjct: 698 VQVGGFRLTVKCSEL------KRAKAAD 719


>gi|423574919|ref|ZP_17551038.1| MutS2 family protein [Bacillus cereus MSX-D12]
 gi|401211189|gb|EJR17938.1| MutS2 family protein [Bacillus cereus MSX-D12]
          Length = 633

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 155/521 (29%), Positives = 266/521 (51%), Gaps = 67/521 (12%)

Query: 24  LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDSAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                NM+++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNMDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +V      ++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGYV------HLVNCKHPLLSGK------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ ++    R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           ETL P Y+++ G +G+SNAL IA  +    ++++RA++ +E
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLKRAKEYME 508


>gi|229113364|ref|ZP_04242822.1| DNA mismatch repair protein [Bacillus cereus Rock1-15]
 gi|228670086|gb|EEL25471.1| DNA mismatch repair protein [Bacillus cereus Rock1-15]
          Length = 633

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 266/520 (51%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQ------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ K+  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLNFKIGQEYRSIIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYFAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLKRAKEYM 507


>gi|229197610|ref|ZP_04324333.1| DNA mismatch repair protein [Bacillus cereus m1293]
 gi|423604873|ref|ZP_17580766.1| MutS2 family protein [Bacillus cereus VD102]
 gi|228585874|gb|EEK43969.1| DNA mismatch repair protein [Bacillus cereus m1293]
 gi|401244021|gb|EJR50385.1| MutS2 family protein [Bacillus cereus VD102]
          Length = 633

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 155/521 (29%), Positives = 266/521 (51%), Gaps = 67/521 (12%)

Query: 24  LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDSAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                NM+++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNMDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +V      ++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGYV------HLVNCKHPLLSGK------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ ++    R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           ETL P Y+++ G +G+SNAL IA  +    ++++RA++ +E
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLKRAKEYME 508


>gi|386319584|ref|YP_006015747.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus pseudintermedius ED99]
 gi|323464755|gb|ADX76908.1| recombination and DNA strand exchange inhibitor protein
           [Staphylococcus pseudintermedius ED99]
          Length = 782

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 204/694 (29%), Positives = 329/694 (47%), Gaps = 84/694 (12%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L+  E+ A++ TL  V N +K        D +++  Y  L   ++    LT L + I
Sbjct: 81  GGTLNVQELNAIK-TLIQVQNQFKTFYNQLVEDEETV-NYEILDGQMQQLPVLTHLYQSI 138

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
               D + L   D AS +L+ IR+   +  + + + L ++         +   ++T R  
Sbjct: 139 HQKCDTQDL--FDSASMELQSIRSRIAKTNQRVRAQLDRMVKSTSNQKKLSDAIVTVRNE 196

Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
           R  + ++A ++    +GI  + S+SG T ++EP   VE NN   RL + E  E   IL+ 
Sbjct: 197 RNVIPVRAEYRQDF-NGIVHDQSASGQTLYIEPSAVVELNNQISRLRSEEATEVQRILAE 255

Query: 237 LTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
           LTAE+A+       + ++V+  +D    +A +A  + G  P  + +  V    +      
Sbjct: 256 LTAEVAEEAEAC-LISEQVMGHLDFLIGKARYAAKIKGTKPTFAVERQVYLPKAF----- 309

Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
            HPLL                                     D  V   I+ E   + V+
Sbjct: 310 -HPLL-----------------------------------DRDTVVANTIEFESSIQTVI 333

Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
           ITGPNTGGKT ++KTLGL  LM+++GL +P  +  +L  FD +  DIGD QS+EQ+LSTF
Sbjct: 334 ITGPNTGGKTVTLKTLGLIILMAQSGLLIPTLDGSQLSVFDNVFCDIGDEQSIEQSLSTF 393

Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
           S H+  IV+ILE  + +SL+L DE+G+GTDPSEG ALA SIL ++     L + TTHY +
Sbjct: 394 SSHMKTIVNILEEANDKSLILFDELGAGTDPSEGAALAMSILDHVHGMGALVMATTHYPE 453

Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           L           NA+ EF ++TL PTY++L G  G SNA +I+K +G   KII  A+ ++
Sbjct: 454 LKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKRLGLGLKIINHAKSMI 513

Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
                        +  Q + E    LE  A+       E+  L RE      DL R    
Sbjct: 514 ------------GQDEQEINEMIASLEKNAKRVDDQRIELDRLVREASQIHNDLSRAYEQ 561

Query: 596 LKAKETQQVQQELNFAKVQIDTVVQ---DFENQLRDASADEINSLIKESESAIAAIVEAH 652
            +  E++ +++  + A  ++   ++   D    LRD   D+  + +KE E     I +  
Sbjct: 562 YQNMESRLIEEAKDKANQRVKAAMEEADDILKSLRDMR-DQKGAEVKEHE----LIDQRK 616

Query: 653 RPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
           R +D +       +    ++     G++V V S G K   V+EV  D++ V VQ G +++
Sbjct: 617 RLEDQYEAKSIKQNVQKQKWDEIKAGDEVKVLSYGQK-GEVLEVLSDEEAV-VQMGIIKM 674

Query: 708 RVKKNNIRPIPNSKRKNAANPAPRLRKQVCTCTS 741
           ++      P+ + ++K  A   P   K+V T T+
Sbjct: 675 KL------PLSDLEKKEKAKEQP---KKVVTRTN 699


>gi|355678274|ref|ZP_09060953.1| hypothetical protein HMPREF9469_03990 [Clostridium citroniae
           WAL-17108]
 gi|354812720|gb|EHE97335.1| hypothetical protein HMPREF9469_03990 [Clostridium citroniae
           WAL-17108]
          Length = 812

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 208/702 (29%), Positives = 332/702 (47%), Gaps = 72/702 (10%)

Query: 17  LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           LEE +    QT+ A+  ++ +     + + DI   L     G  LS  E+ ++   + A 
Sbjct: 40  LEEIRTWQAQTTDAVTRVRLKGTTSFAGVRDIRDSLKRLEIGSSLSIPELLSISSNMTAA 99

Query: 76  NNVWKKLTEAAELDG---DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
                     AE DG   D +     L  L      LT L  +I  CI  +  +  D AS
Sbjct: 100 ARAKAYGRHEAEDDGSRQDGIDTSDSLEPLFAGLEPLTPLNNEIKRCILSEDEVA-DDAS 158

Query: 133 EDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
             L  +R   K    R    L+S+L    + +  A      +IT R  R C+ +K+ +K 
Sbjct: 159 PGLSHVRRSMKVIADRIHTQLNSILNSNRSYLQDA------VITMRDGRYCLPVKSEYKN 212

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +  G+  + S++G+T F+EP   ++ NN    L   E  E  A+L+ L+ + A    E+
Sbjct: 213 QV-SGMVHDQSATGSTLFIEPMAIIKLNNEVRELEIQEQKEIEAVLASLSNQAAPFIEEL 271

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           K   + + ++D  FA+A  A+      P+ +++        I+I+  +HPLL        
Sbjct: 272 KMNQELLSQLDFIFAKASLARRYKCSAPVFNNRGF------IHIKDGRHPLL-------- 317

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                  NP                       VPI++ +  +  ++++TGPNTGGKT S+
Sbjct: 318 -------NPQSV--------------------VPINVWLGKDFDLLIVTGPNTGGKTVSL 350

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL +LM ++GL++PA     L  FD + ADIGD QS+EQ+LSTFS H++ IV IL  
Sbjct: 351 KTVGLFTLMGQSGLHIPAWEGSELAVFDEVFADIGDEQSIEQSLSTFSAHMTNIVRILSE 410

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
               SL L DE+G+GTDP+EG ALA +IL +L +     + TTHY++L          EN
Sbjct: 411 ADARSLCLFDELGAGTDPTEGAALAIAILSFLHNMKCRTMATTHYSELKVFALGTQGVEN 470

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
           A  EF++ETL+PTYR+L G  G SNA  I+K +G    II+ A+  +     E +     
Sbjct: 471 ACCEFNVETLQPTYRLLIGIPGKSNAFAISKKLGLPDYIIEDAKNHL-----EAKDESFE 525

Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
           +L  SL   R  +E +     +   EI  L   +  + + LD R   +    T++ Q+ L
Sbjct: 526 DLLSSLESSRLTIEKEQAEINTYKEEIAKLKSRLTQKEERLDERKDKVIRNATEEAQRIL 585

Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS- 667
             AK   D  ++   N+L  A++  +N  ++E  + +    +  + D+  +V     S  
Sbjct: 586 REAKETADQTIKQI-NKL--AASSGVNKELEEQRAKLRD--QMKKTDEKLAVKAKGPSQP 640

Query: 668 FTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
            +P   + G+ V V S+  K  TV  +P     + VQ G +R
Sbjct: 641 ISPKKLKIGDGVKVLSMNLK-GTVSTLPNAKGDLYVQMGILR 681


>gi|169827790|ref|YP_001697948.1| DNA mismatch repair protein [Lysinibacillus sphaericus C3-41]
 gi|168992278|gb|ACA39818.1| DNA mismatch repair protein [Lysinibacillus sphaericus C3-41]
          Length = 634

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 156/510 (30%), Positives = 252/510 (49%), Gaps = 53/510 (10%)

Query: 24  LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A  ++ ++  +    + +I  I+     G +L PSE+ ++   LR   N+ KK 
Sbjct: 47  LNETTEARVIVDAEGHVPFLGVSNIEHIMTKLAKGMILDPSELISMSDFLRGCRNI-KKF 105

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
               E     L  Y+  +   KN      +EE+I F I      +   AS +L+ IR   
Sbjct: 106 MLDKEFFAPVLSSYANSMAEFKN------VEEEINFAIKANR--VDSAASRELKRIRHHI 157

Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
           +   E +   L K          I +  I+++  R  + IKAS+K  +  G  + +SS G
Sbjct: 158 ETTEEKIKERLTKFLNNSANKTYIQEFFISQKDDRYTIPIKASYKNHV-QGTIVEISSKG 216

Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
           AT FMEP    + N     L   E  EE  IL+ L+  +      +   M+ + + D+ F
Sbjct: 217 ATVFMEPSIVAKLNGELATLKAEEAVEEYQILASLSGLLMNHLHALHINMELISQYDMVF 276

Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
           A+A F++ + G+ P L+   ++       I G +HPLL G++                  
Sbjct: 277 AKAKFSKQIGGMEPRLNDYGYIQV-----ING-RHPLLPGNA------------------ 312

Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
                             VP+   +  + R ++ITGPN GGKT  +KT+GL +L + +G 
Sbjct: 313 ------------------VPLQFTIGKDYRSLIITGPNAGGKTVVLKTIGLLTLATMSGF 354

Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
           ++ A     L  FD I  DIGD+QS+E  LSTFS H+  + DI+   +  +L+++DEIGS
Sbjct: 355 HIVADEGTELAIFDHIFVDIGDNQSMENALSTFSSHMKNLSDIMRASNNHTLLILDEIGS 414

Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
           GT+P+EG ALA +IL+       + + TTHY ++    +    F NAA  F+ ETL P Y
Sbjct: 415 GTEPNEGAALAIAILEEFYQMGCITIATTHYGEIKRFSEMHPDFMNAAMRFNSETLEPLY 474

Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
           +++ G++G+SNAL I+K +    +++QRAQ
Sbjct: 475 QLMIGTSGESNALWISKKMNVRAEVLQRAQ 504


>gi|217960893|ref|YP_002339459.1| putative MutS family protein [Bacillus cereus AH187]
 gi|222096952|ref|YP_002531009.1| DNA mismatch repair protein [Bacillus cereus Q1]
 gi|229140103|ref|ZP_04268663.1| DNA mismatch repair protein [Bacillus cereus BDRD-ST26]
 gi|375285398|ref|YP_005105837.1| MutS family protein [Bacillus cereus NC7401]
 gi|423353182|ref|ZP_17330809.1| MutS2 family protein [Bacillus cereus IS075]
 gi|423567625|ref|ZP_17543872.1| MutS2 family protein [Bacillus cereus MSX-A12]
 gi|217066811|gb|ACJ81061.1| putative MutS family protein [Bacillus cereus AH187]
 gi|221241010|gb|ACM13720.1| DNA mismatch repair protein [Bacillus cereus Q1]
 gi|228643358|gb|EEK99629.1| DNA mismatch repair protein [Bacillus cereus BDRD-ST26]
 gi|358353925|dbj|BAL19097.1| MutS family protein, putative [Bacillus cereus NC7401]
 gi|401089822|gb|EJP97986.1| MutS2 family protein [Bacillus cereus IS075]
 gi|401213684|gb|EJR20423.1| MutS2 family protein [Bacillus cereus MSX-A12]
          Length = 633

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 155/521 (29%), Positives = 266/521 (51%), Gaps = 67/521 (12%)

Query: 24  LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                NM+++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNMDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +V      ++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGYV------HLVNCKHPLLSGK------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ ++    R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           ETL P Y+++ G +G+SNAL IA  +    ++++RA++ +E
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLKRAKEYME 508


>gi|196042562|ref|ZP_03109801.1| putative MutS family protein [Bacillus cereus 03BB108]
 gi|229185709|ref|ZP_04312887.1| DNA mismatch repair protein [Bacillus cereus BGSC 6E1]
 gi|196026046|gb|EDX64714.1| putative MutS family protein [Bacillus cereus 03BB108]
 gi|228597796|gb|EEK55438.1| DNA mismatch repair protein [Bacillus cereus BGSC 6E1]
          Length = 633

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 155/521 (29%), Positives = 266/521 (51%), Gaps = 67/521 (12%)

Query: 24  LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLAAYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L++  +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNNHGY------IHLVNCKHPLLSGK------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ ++    R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           ETL P Y+++ G +G+SNAL IA  +    +++QRA+  +E
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLQRAKAYME 508


>gi|255656133|ref|ZP_05401542.1| DNA mismatch repair protein [Clostridium difficile QCD-23m63]
 gi|296450435|ref|ZP_06892191.1| DNA mismatch repair protein MutS2 [Clostridium difficile NAP08]
 gi|296879442|ref|ZP_06903436.1| DNA mismatch repair protein MutS2 [Clostridium difficile NAP07]
 gi|296260696|gb|EFH07535.1| DNA mismatch repair protein MutS2 [Clostridium difficile NAP08]
 gi|296429588|gb|EFH15441.1| DNA mismatch repair protein MutS2 [Clostridium difficile NAP07]
          Length = 636

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 158/519 (30%), Positives = 252/519 (48%), Gaps = 60/519 (11%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           +KL     A   +  S  + L  + +    ++    G ++ P E+  +   LR    +  
Sbjct: 45  RKLAENKEARKIIENSNHVPLEGLFNAGSTIDKIEKGMVIEPIELVNIEDFLRGCRKMKA 104

Query: 81  KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
            + E  E    +L  Y+  +   KN      +E++I +CI      +   AS++L+ +R 
Sbjct: 105 FMLEK-EFYSPTLSSYALNITECKN------IEDEINYCIKSNK--VDSNASKELKKVR- 154

Query: 141 ERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
              RN+E     +   L K          I + +I+KR  R  + IK+S+K  + DG  L
Sbjct: 155 ---RNIEITEAKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEV-DGTIL 210

Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
           + SS G T F+EP      +   + L   E  EE  ILS LT  I +   +IK  ++ + 
Sbjct: 211 DTSSKGNTVFIEPISVSNLSTELIMLKADETIEEYKILSYLTELIFEKISQIKLNIEILS 270

Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
           E D+ FA+A ++Q + G+ P +++  ++       I+G KHPLL G +            
Sbjct: 271 EYDMVFAKAKYSQKIKGITPKINNNGYIKI-----IKG-KHPLLTGDA------------ 312

Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
                                   VP+D ++    R ++ITGPN GGKT ++KT+GL +L
Sbjct: 313 ------------------------VPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLTL 348

Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
           M + G  + AK       F+ +  DIGD+QS+E  LSTFS HI  I +I+ L +  +LVL
Sbjct: 349 MVQCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMNLSNNSTLVL 408

Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
            DEIGSGT+P+EG  LA S+L+       + + +THY ++         FENA   F  E
Sbjct: 409 FDEIGSGTEPNEGAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDKE 468

Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           TL P Y++  G + DSNAL I+K +G   +++ RA++ V
Sbjct: 469 TLEPLYKLTIGKSEDSNALFISKKMGIKNRVLDRAKEYV 507


>gi|406837044|ref|ZP_11096638.1| DNA mismatch repair protein [Lactobacillus vini DSM 20605]
          Length = 784

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 199/676 (29%), Positives = 330/676 (48%), Gaps = 80/676 (11%)

Query: 51  LNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNC--NF 108
           +N+A++G+ L+  EI  V R+   V + + +L    E++  SL   +  L++        
Sbjct: 80  INAALNGKELA--EIAKVLRSAAEVKSFFSQLA-IEEVNLHSLNALANQLQVFPQLTKQL 136

Query: 109 LTELEEKIGFCIDCKL-LIILDRASEDLEL-IRAERKRNMENLDSLLKKVAAQIFQAGGI 166
           L  LEE      D  + L  + R+   L L +R++       L++L++  +A+      +
Sbjct: 137 LRSLEEDGHLSDDASVKLAAIRRSMSQLRLQLRSQ-------LNALIRGKSAKY-----L 184

Query: 167 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 226
            +P+IT R  R  + +K  ++     G+  + S+SG T F+EP  A++ NN   +   +E
Sbjct: 185 TEPVITIRDDRYVIPVKQEYRGHF-GGVVHDQSASGQTLFVEPAAALDLNNRLRQRQANE 243

Query: 227 IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
             E   IL+ L+A +A   +EI      + E D A A+A +AQ +    P LS       
Sbjct: 244 REEIQRILTALSASLAPYVKEIAANAALLGEFDFANAKAKYAQQLKATYPRLS------V 297

Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
           D+ + +    HPLL                       N +  V +            DI 
Sbjct: 298 DNQVYLRQAWHPLL-----------------------NEKKVVRN------------DIM 322

Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
           +  + + +VITGPNTGGKT ++KTLGL  LM ++GL++PA    ++  F  I ADIGD Q
Sbjct: 323 LGQDYQTMVITGPNTGGKTITLKTLGLIQLMGQSGLFIPAFEDSQIGVFKEIFADIGDEQ 382

Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
           S+EQNLSTFS H++ IV+IL    + SLVL+DE+G+GTDP EG ALA +IL  L      
Sbjct: 383 SIEQNLSTFSAHLTNIVEILNNCDQSSLVLLDELGAGTDPQEGAALAVAILDALAALGSY 442

Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
            V TTHY +L     +     NA+ EF  +TL+PTYR+L G  G SNA  I++ +G   +
Sbjct: 443 VVATTHYPELKAYGYERLSTINASMEFDSQTLQPTYRLLIGIPGQSNAFAISQRLGLSAE 502

Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
           II  A++L        Q    +++ Q L+ +R++ E +    A    E  +L+ +++   
Sbjct: 503 IIAAARQLT-----SNQSQDLNQMIQDLVRKRQQAEEERARLAKYLTEGQELHHDLQVAF 557

Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--SA 644
              +++ AHL  +      Q ++ A  + D ++ +      +A+A      +KE +  +A
Sbjct: 558 NKFEKQKAHLLEQAKLHANQIIDQASQRSDELISELRQMKLNANAS-----VKEDQLITA 612

Query: 645 IAAIVEAHRP---DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
              + E H+P    +             P  G+ V VK   D+  T++E  G  +   VQ
Sbjct: 613 KTKMNELHQPLLSKNRVLRKVKLNQQLKP--GDDVLVKPY-DQQGTLLEKTGKHEWE-VQ 668

Query: 702 YGKMRVRVKKNNIRPI 717
            G +++++ + N+  I
Sbjct: 669 LGSLKMKIAEGNLEKI 684


>gi|320104829|ref|YP_004180420.1| DNA mismatch repair protein MutS domain-containing protein
           [Isosphaera pallida ATCC 43644]
 gi|319752111|gb|ADV63871.1| DNA mismatch repair protein MutS domain protein [Isosphaera pallida
           ATCC 43644]
          Length = 703

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 195/616 (31%), Positives = 293/616 (47%), Gaps = 66/616 (10%)

Query: 15  KSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           +++   Q L  + + A+A   + P     + D+   +  A++G  L+  ++C V  TLRA
Sbjct: 42  ETIRRRQALTTEMAEAIASGLTPPF--GGLRDVRAPIRRAMTGATLTADDLCEVAETLRA 99

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
           V  + + L +     GD   R   L E        T +   I  C+D +   +LD AS  
Sbjct: 100 VGQLDQWLAKI----GDQFPRLGGLRE---GVGEFTGVVVAIEGCLDNRGQ-VLDTASRR 151

Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITK--RRSRMCVGIKASHKYLLPD 192
           L  +R E  +  E +   L+++         I  P + K  R     +     H Y+LP 
Sbjct: 152 LSNLRREIHQVEEAIQEQLRRM---------IRSPELRKILRYPNFTM---VGHHYVLPV 199

Query: 193 ---------GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
                    G     S+S  T F+EP+   E +     L   E  E   IL  L+A++ +
Sbjct: 200 AKEHRGELLGSVHRSSASNETVFIEPQAIAEKSAHLAFLRAREAKEIQRILRFLSAQVGQ 259

Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
               +   ++ + ++DL  A+  ++       P  ++      D  + +   +HPLL   
Sbjct: 260 VGDALLSTLENLGDLDLIHAQGRYSLDFRMAPPDFNT------DGRLVLNNARHPLLEDL 313

Query: 304 SLR----SLSAASSNSNPLKSDVENSEMTVGSLSK------GISDFPV---------PID 344
             R        A   S PL       E    ++S       G    PV         PI+
Sbjct: 314 FRRHPYEPPPRALEVSAPLSVSDSGPETATAAVSAPSAEAGGGHPAPVVERPRRVVTPIN 373

Query: 345 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 404
           + +  +  ++VITGPNTGGKT ++KT+ L + M++ GL++PA    +LP FD ILADIGD
Sbjct: 374 LHLGFQFSILVITGPNTGGKTVALKTVALLAAMAQCGLHIPAGQGSQLPVFDDILADIGD 433

Query: 405 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
            QSLEQ+LSTFS HI RI  IL   +  SLV++DE+G+GTDP+EG AL  +IL  L D +
Sbjct: 434 EQSLEQSLSTFSSHIRRIRTILSRATPRSLVILDELGAGTDPTEGAALGRAILDEL-DSI 492

Query: 465 G-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
           G LA+VTTH  DL      + R ENAA EF LETLRP Y +  G  G SNAL IA+ +  
Sbjct: 493 GCLAIVTTHIGDLKTYAFTNPRVENAAVEFDLETLRPMYHLTIGDIGQSNALQIARRLDL 552

Query: 524 DRKIIQRAQKLVERLR-PERQQHRKSELYQSLMEERRK-----LESQARTAASLHAEIMD 577
              ++ RA + +E+ R PE  +    +  +   EE RK          R   +L  ++ D
Sbjct: 553 PGHVVDRAARYLEQGRGPELPEWDLIQALRKEAEEARKAALEAQAEAERRREALDRKLDD 612

Query: 578 LYREIEDEAKDLDRRA 593
           + R+ E+EAK  D RA
Sbjct: 613 VRRQTENEAKLADARA 628


>gi|300811593|ref|ZP_07092077.1| putative recombination and DNA strand exchange inhibitor protein
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497453|gb|EFK32491.1| putative recombination and DNA strand exchange inhibitor protein
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 786

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 199/618 (32%), Positives = 303/618 (49%), Gaps = 89/618 (14%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           +LD AS DL  +R  R   +     + +K+ A      G  + + ++T R  R  + +K 
Sbjct: 147 VLDTASADLARLRHGR---LATEAEIKEKMTAYTRGKNGQYLSEQIVTIRDDRYVIPVKQ 203

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            ++Y    G+  + S+SG T F+EP   +  NN   RL N  +AEE   +  +  E++  
Sbjct: 204 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 258

Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
            RE    IK +   + E+D   A+A  A+ M    P LS+      D S  + G +HPL+
Sbjct: 259 AREEMEAIKRVAAALSELDFLQAKAKLAKQMRASQPTLSA------DQSFKLLGARHPLI 312

Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
                          +P                    D  V  DI +  +   ++ITGPN
Sbjct: 313 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 337

Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
           TGGKT ++KT GL  LM+++GL++PA     +  FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 397

Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
            IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R +    +VTTHY +L    
Sbjct: 398 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 457

Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
               R  NA+ EF ++TL PTYR+  G  G SNA  IA+ +G    ++  A+KL+     
Sbjct: 458 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 517

Query: 541 ERQQHRKSELYQSL---MEERRKLESQARTAASLHAEI---MDLYREIEDEAKD--LDR- 591
           +   H   EL +      E ++KL++    A  L  ++   +D+Y +   +  D  LDR 
Sbjct: 518 DI-NHMIDELNKQTKLATENKQKLQTSLDRAKQLEKKLQDALDIYNQRVQKQLDFALDRA 576

Query: 592 -RAAHLKAKETQQVQQELNFAK---VQIDTVVQDFENQLRDASADEINSLIKESESAIAA 647
                 K K+  ++  EL  A+   +QI T      NQL DA   E N L K+ E+ +A 
Sbjct: 577 NEIVAKKRKKADKIIAELEEARKEGMQIKT------NQLMDAKG-EFNQLAKQ-EANLAK 628

Query: 648 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
                       V +        Q G++V V S G +  TV +  G+ D   V  G++++
Sbjct: 629 ----------NKVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHD-YEVSLGRIKL 676

Query: 708 RVKKNNIRPIPNSKRKNA 725
           +V   +I  +   +++ A
Sbjct: 677 KVTDRDIDKLATGQKQQA 694


>gi|402835332|ref|ZP_10883901.1| MutS2 family protein [Mogibacterium sp. CM50]
 gi|402274829|gb|EJU24000.1| MutS2 family protein [Mogibacterium sp. CM50]
          Length = 791

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 164/524 (31%), Positives = 262/524 (50%), Gaps = 67/524 (12%)

Query: 21  QKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
           Q+ L +T+ A++ ++    + +    +I G+L+    G+ LS  E+  V R+L     V 
Sbjct: 44  QEALTETTEAVSVILYKGDIPVGEFGNIIGLLDIVRKGRTLSMRELLTVNRSLVGAREVK 103

Query: 80  KKLTEAAELDGDSLQRYSPLLELLKNCNFLT----ELEEKIGFCIDCKLLIILDRASEDL 135
                      D L    P + ++   + L      LE +I  CI  +  +  D AS +L
Sbjct: 104 -----------DFLSSDVPEIPMICEISSLIAPIPRLESEINRCILSEDEM-SDNASPEL 151

Query: 136 ELIRAE-RKRN---MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
           + IR E R +N      +DS     +  ++    +   ++T R  R  + +K  +   +P
Sbjct: 152 KRIRREIRNKNESIRHKIDSYTSSGSNNVY----LQDSIVTMRNGRYVIPVKREYSSRVP 207

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
            G+  + S +GAT+F+EP+  V  NN    L  +E  E   IL +L+  + +   E++  
Sbjct: 208 -GLIHDQSKTGATFFIEPQAIVNLNNELRELELAEQREIERILQMLSVRVGEHYNELRNN 266

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
            + ++++D+  A+   +  +DGV P      H+  +  +NI   +HPLL           
Sbjct: 267 QELMVKLDVINAKGRLSVALDGVAP------HLDANGVLNIRAGRHPLL----------- 309

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
             + N +                      VPID+ +  +   ++ITGPNTGGKT ++KT+
Sbjct: 310 --DKNKV----------------------VPIDVSLGEDYDTLLITGPNTGGKTVTLKTI 345

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
           GL  LM+++GL++P     R+P F  + A+IGD QS+E NLSTFS H+    DI+     
Sbjct: 346 GLFILMTESGLHIPCCEESRIPIFRDVFAEIGDEQSIENNLSTFSSHMLNTADIIANADA 405

Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
            SLVL+DEIGSGTDP+EG AL  ++L+ L+ +    V TTHY +L          ENA+ 
Sbjct: 406 NSLVLLDEIGSGTDPAEGAALGIAMLEVLKTKGAHIVATTHYTELKKYALSTEGVENASM 465

Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           EF +ETL PTY+I  G  G SNA  I++ +G D  II RA  L+
Sbjct: 466 EFDMETLSPTYKIKIGLPGKSNAFEISRKLGLDSAIIDRAISLM 509


>gi|423528674|ref|ZP_17505119.1| MutS2 family protein [Bacillus cereus HuB1-1]
 gi|402450623|gb|EJV82455.1| MutS2 family protein [Bacillus cereus HuB1-1]
          Length = 633

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 266/520 (51%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLQKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I    + +   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQ------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP+  K+  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLHFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYFAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYM 507


>gi|423384970|ref|ZP_17362226.1| MutS2 family protein [Bacillus cereus BAG1X1-2]
 gi|401638925|gb|EJS56667.1| MutS2 family protein [Bacillus cereus BAG1X1-2]
          Length = 633

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 266/520 (51%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I    + +   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQ------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP+  K+  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLHFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYFAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYM 507


>gi|291295490|ref|YP_003506888.1| MutS2 family protein [Meiothermus ruber DSM 1279]
 gi|290470449|gb|ADD27868.1| MutS2 family protein [Meiothermus ruber DSM 1279]
          Length = 750

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 212/720 (29%), Positives = 345/720 (47%), Gaps = 103/720 (14%)

Query: 16  SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           +LEE+Q+     + ALA     P  L  I D+   L +A  G  L   ++  V  +L A+
Sbjct: 38  TLEEAQRQQEIVAEALAY----PYRLGGIVDLRPPLAAAREGLRLEGPQLREVAASLEAI 93

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
             +  +L E     G  L+  +    + ++  FL  + E +    + +     D A+  L
Sbjct: 94  VALKHELLEI----GVHLKALAG--RIGEHTYFLRRIRESLDEAGNVR-----DEATPRL 142

Query: 136 ELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
             IR      R+R  + L  L+ +          I +  +T RR R  + +KASH+  LP
Sbjct: 143 REIRRRVNPVRERIQDRLYQLMDR------HPEAIQERFVTLRRDRYVIPVKASHQNKLP 196

Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
            GI L+ S S  T ++EP   V  NN    L   E AE   +L  L+A +A ++ E++  
Sbjct: 197 -GIVLDQSDSKLTVYLEPASVVPLNNELASLRLEEEAEVNRVLFELSAALA-NDPELEAT 254

Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
           +  + E+D+A A A  A+    V P L+       D    ++  +HPL+           
Sbjct: 255 LQALTELDMARAAASLAEDWGLVRPRLNR------DGLYRLQAARHPLI----------- 297

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
              +NP+ +                       DI +    R+++ITGPN GGKTA +KTL
Sbjct: 298 ---ANPVSN-----------------------DITLTPHNRILLITGPNMGGKTALLKTL 331

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
           GLA LM++ GLY+ A     L + D +  DIGD QSL+++LSTF+ H+ R+ ++LE  + 
Sbjct: 332 GLAVLMAQCGLYV-AAEQAELAFPDRLFVDIGDQQSLQESLSTFAAHVLRLKEVLEAATP 390

Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
            SL LIDE+GSGTDP EG ALA + ++ L  +    ++TTH + L          +NA+ 
Sbjct: 391 HSLALIDELGSGTDPEEGAALAQAFVEGLLAKGVRGLITTHLSPLKAFAQDTPGVQNASM 450

Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
            F LE LRPTY+++ G+ G S AL+IA+ +GF R+ ++RA+ L   L PE    R   L 
Sbjct: 451 RFDLERLRPTYQLVVGAPGRSYALSIARRLGFPREQLERAEAL---LGPE--GGRLERLL 505

Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
            +L  ER +L        +LH +     +E     ++L R+ A L   + + +++    A
Sbjct: 506 AALEAERERL-------YTLHQKAQAQQQETARLQQELARQLAELAEHKERLIEE----A 554

Query: 612 KVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE----AHRPDDDFSVSETNTSS 667
           K Q + +V++ + ++R        S  +    A+  +++      RP+      +   S+
Sbjct: 555 KAQAEQIVKEAQERIRQTRE---RSKTQGQGQALQELIQLRSRYQRPE------KAAPSN 605

Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
              Q G  V V   G + ATVVE+ G +   ++Q G +R+ V    ++P P  + K +A 
Sbjct: 606 PGLQVGAIVEVPEYGGQ-ATVVELRGQE--AVLQMGAVRLTVPVARLQPQPAHQSKPSAG 662


>gi|392531789|ref|ZP_10278926.1| recombination and DNA strand exchange inhibitor protein
           [Carnobacterium maltaromaticum ATCC 35586]
          Length = 788

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 206/686 (30%), Positives = 326/686 (47%), Gaps = 83/686 (12%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G +L+  EI  + + LR    V +   + +E+ G  L R   L EL+     L  L + I
Sbjct: 81  GAMLNGIEIAQIGKVLRTTTEVTRFFDDLSEI-GVELFR---LYELVAKLVTLPTLNQMI 136

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLIT 172
              ID    + +D AS+ L+ IR   KR+  N    LDSL++   AQ      +   L+T
Sbjct: 137 REAIDEDGHV-MDDASQALKGIRTGMKRSESNIREKLDSLIRGKNAQY-----LSDALVT 190

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
            R  R  + +KA ++     G+  + SS+G T F+EP+  V+ NN   +L   E  E   
Sbjct: 191 MRNDRYVIPVKAEYRNHF-GGVVHDQSSTGQTLFIEPQSVVDLNNKLRQLQIEERQEIDR 249

Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
           IL+ L+ EIA    EI   M  + ++D   A+A + + +    P+++ ++ V F  +   
Sbjct: 250 ILAELSNEIAPYGAEILNNMFLLGKLDFIGAKAAYGKNIKATRPLVNEENDVRFIQA--- 306

Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
              +HPL+                  K  V N                   DI +  + +
Sbjct: 307 ---RHPLI----------------DEKQAVAN-------------------DILIGGDYQ 328

Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
            +VITGPNTGGKT ++KTLGL  LM ++GL LP     ++  F  + ADIGD QS+EQ+L
Sbjct: 329 ALVITGPNTGGKTITLKTLGLLQLMGQSGLQLPVAEGSQMGIFTEVFADIGDEQSIEQSL 388

Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG----LAV 468
           STFS H++ IV IL  +  +SL+L DE+G+GTDP EG ALA +IL    D+VG      +
Sbjct: 389 STFSSHMTNIVSILNKIDNKSLILFDELGAGTDPQEGAALAIAIL----DQVGAVGSYVM 444

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY +L           NA+ EF +ETL PTYR+L G  G SNA  I+K +G D  +I
Sbjct: 445 ATTHYPELKAYGYNRPGTINASMEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLDTAVI 504

Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
             A+ L+     + +    +E+   L   R+  E +         E   LY+++    + 
Sbjct: 505 DSARSLI-----DGESQNLNEMIADLENRRKMTEMEYHEVRQYVEEAETLYQDLTTALEQ 559

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAI 645
                  L  K  ++  Q ++ A+ +   +V D    QL      +    IKE E   A 
Sbjct: 560 FFGEREDLVKKAREKANQIVSEAEEEASKIVSDLRKMQL----TGQFEGGIKEHELIDAK 615

Query: 646 AAIVEAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
           + +   H  +      V +   +    + G++V V S G +   + +V G++   LVQ G
Sbjct: 616 SKLANLHHEETLTKNKVLKKAKAKQQFKKGDEVIVASYGQRGTLMEKVEGNN--WLVQLG 673

Query: 704 KMRVRVKKNNI---RPIPNSKRKNAA 726
            +++++K++++   +P     RK  A
Sbjct: 674 ILKMKIKESDMTLAQPEKEPTRKMVA 699


>gi|257895303|ref|ZP_05674956.1| DNA mismatch repair protein [Enterococcus faecium Com12]
 gi|257831868|gb|EEV58289.1| DNA mismatch repair protein [Enterococcus faecium Com12]
          Length = 576

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 148/416 (35%), Positives = 221/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L++IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                    D E                 VP DI +  + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +P     ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D  +I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511


>gi|148658104|ref|YP_001278309.1| MutS2 family protein [Roseiflexus sp. RS-1]
 gi|148570214|gb|ABQ92359.1| MutS2 family protein [Roseiflexus sp. RS-1]
          Length = 828

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 217/735 (29%), Positives = 343/735 (46%), Gaps = 114/735 (15%)

Query: 19  ESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
           E ++ L  T  A  ++ + P + +    D+   +  A  G +  P  +  +  TL +   
Sbjct: 44  EVRRRLRLTDEARRLLDAMPDVSIGGARDVRPAVGLARRGGVCDPEALIEIAATLASARR 103

Query: 78  VWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCI--DCKLLIILDRASED 134
           +   L +   LD  S     PLL E   +   L E+E+ +   I  D +   +LD AS  
Sbjct: 104 LRATLRK---LDAASF----PLLHETAVDLPLLPEVEDAVARAIGEDGQ---VLDSASPK 153

Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGI-DKPLITKRRSRMCVGIKASHKYLLPDG 193
           L  +R+E +     L   L  +   I   G +  +P+IT R  R  V +KA+H+  +  G
Sbjct: 154 LARLRSEVRTAFNRLQEKLHNL---IMTHGDVLQEPIITVRNGRYVVPVKATHRRAI-RG 209

Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
           +  + S+SGAT ++EP   VE NN    L  +E AE   IL+ L+A +      I   ++
Sbjct: 210 LVHDQSASGATLYIEPLTIVELNNAWRELQLAEQAEVERILAELSALVGDHAGAITAGVE 269

Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
            +  +DLAFA A +A  M  V P +        +  + +   +HPLL             
Sbjct: 270 ALATLDLAFAMAQYAAAMRCVMPEIVDPPLPPDEPLLLLTAARHPLL------------- 316

Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
             +P K                     VPID+++    R+++ITGPNTGGKT ++KT GL
Sbjct: 317 --DPQKV--------------------VPIDMRLGGRFRLLLITGPNTGGKTVALKTTGL 354

Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE------ 427
            +LM++AG+++PA    RLP F  I ADIGD QS+EQ+LSTFS H++ I+ IL       
Sbjct: 355 LALMAQAGMHIPASQPSRLPVFAQIFADIGDEQSIEQSLSTFSSHMTNIIRILRALEDAP 414

Query: 428 ----------------------LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
                                 L    +LVL+DE+G+GTDP EG ALA +I++ L +   
Sbjct: 415 DVAPAETSVSGSTQTMPPDTQRLGRMPALVLLDELGAGTDPVEGAALARAIIERLLELGV 474

Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
           L V TTHYA+L          ENA+ EF +ETL PTY++  G  G SNAL IA  +G   
Sbjct: 475 LGVATTHYAELKAFAYATPGVENASVEFDVETLAPTYKLTIGLPGRSNALAIAARLGLAP 534

Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
            +++RA+  +      R+  +  +L   +  ER    ++ + A  + A          D 
Sbjct: 535 DLVERARATM-----AREDVQVEDLLAGIHRERDAAAAELQRAMEVRA----------DA 579

Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ---LRDASA---------DE 633
            K  DR AA L+A E Q+  +    A+  I+  ++   N+   LRD S          +E
Sbjct: 580 EKYRDRLAAELRAFEEQR-DEAWQAAREAIEAELRQVRNEVRRLRDESRSVAASRRWLEE 638

Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 693
               ++E+ +++ A V   +P    + +    +   P  G+ V V+S+G     ++ +  
Sbjct: 639 AERRLQEARASLPA-VPPGKPAGHPAPAAEQVARLQP--GDVVRVRSVG-LTGEILSINE 694

Query: 694 DDDTVLVQYGKMRVR 708
           +D T  VQ G  R++
Sbjct: 695 EDQTAEVQVGGFRMQ 709


>gi|255307157|ref|ZP_05351328.1| DNA mismatch repair protein [Clostridium difficile ATCC 43255]
          Length = 636

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 250/520 (48%), Gaps = 62/520 (11%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           +KL     A   +  S  + L  + ++   ++    G ++ P E+  +   LR    +  
Sbjct: 45  RKLAENKEARKIIENSNHIPLEGLFNVGSTIDKIEKGMIIEPVELVNIEDFLRGCRKMKA 104

Query: 81  KLTEAAELDGDSLQRYSPLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
            + E         + YSP L     N      +E++I +CI      +   AS++L+ IR
Sbjct: 105 FMLEK--------EFYSPTLSSYALNITECKSIEDEINYCIKSNK--VDSNASKELKKIR 154

Query: 140 AERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
               RN+E     +   L K          I + +I+KR  R  + IK+S+K  + +G  
Sbjct: 155 ----RNIEITEGKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEV-NGTI 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           L+ SS G T F+EP      +     L   E  EE  ILS LT  I +   +IK  ++ +
Sbjct: 210 LDTSSKGNTVFIEPISVSNLSTELTMLKADETIEEYKILSYLTELIFEKISQIKLNIEIL 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            E D+ FA+A ++Q + G+ P +++  ++       I+G KHPLL G +           
Sbjct: 270 SEYDMVFAKAKYSQKIKGITPKINNNGYIKI-----IKG-KHPLLTGDA----------- 312

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP+D ++    R ++ITGPN GGKT ++KT+GL +
Sbjct: 313 -------------------------VPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM + G  + AK       F+ +  DIGD+QS+E  LSTFS HI  I +I+ L +  +LV
Sbjct: 348 LMVQCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMSLSNNSTLV 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG  LA S+L+       + + +THY ++         FENA   F  
Sbjct: 408 LFDEIGSGTEPNEGAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDK 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y++  G + DSNAL I+K +G   +++ RA++ V
Sbjct: 468 ETLEPLYKLTIGKSEDSNALFISKKMGIKNRVLDRAKEYV 507


>gi|315924184|ref|ZP_07920410.1| DNA mismatch repair protein MutS [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315622586|gb|EFV02541.1| DNA mismatch repair protein MutS [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 793

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 172/527 (32%), Positives = 266/527 (50%), Gaps = 57/527 (10%)

Query: 17  LEESQKLLNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
           LEE+   L+ T  A  M +++    ++ + +I   ++ A  G  LS  ++  +  +LR V
Sbjct: 40  LEEADIWLDWTDEATGMILRNGRAPMAALCNIPEYVHRAEIGSTLSMRQLLEIASSLRVV 99

Query: 76  NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASED 134
            ++     E  E   ++L R     + L  C  L  E+ +KI   I  K +   DRAS  
Sbjct: 100 RDMQAYFDEDPE--QEALNRLHNDFDALDPCADLEAEISKKI---IGPKEMS--DRASRA 152

Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
           L  IR E       +   L ++ +       + + +IT R +R  V +K  ++  +P GI
Sbjct: 153 LNQIRKEITAKNAQITDKLNRIISSSANEKVLQERIITVRNNRYAVPVKQEYRNQIP-GI 211

Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
            L+ S++GAT F+EP   V+ NN    LS  E  E   IL  LT +IA  +  +    D 
Sbjct: 212 VLDKSATGATLFIEPAAVVQLNNELKILSVEEEKEIARILKALTEKIAAYKMVLIADYDV 271

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSF----DSSINIEGIKHPLLLGSSLRSLSA 310
           ++ +D  FA+A +     GV         V+F    ++ + +   +HPLL          
Sbjct: 272 LVHLDFVFAKAAYGLNTGGV--------RVAFKDDRENVLQLLRARHPLL---------- 313

Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
                +P ++                    V  DI V  +   +VITGPNTGGKT ++KT
Sbjct: 314 -----DPRQA--------------------VASDIAVSKDIHTIVITGPNTGGKTVTLKT 348

Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
           +GL S+M ++GL++PA+       F  + ADIGD QS+EQ+LSTFS H+   V+ ++   
Sbjct: 349 IGLLSVMIQSGLFVPAREGSYTRCFREVFADIGDEQSIEQSLSTFSAHMKNTVNFIDKAQ 408

Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
           ++ LVL DE+G+GTDP+EG ALA S+L+ L  R    V TTHY++L       +   NA+
Sbjct: 409 KDDLVLFDELGAGTDPTEGAALAISLLEVLHARGVTTVATTHYSELKEYALTTSGIVNAS 468

Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
            EF +ETL+PTYR+L G  G SNA  IA+ +G   +II RA+  V +
Sbjct: 469 VEFDVETLQPTYRLLIGIPGKSNAFEIAQKLGLKPEIIARARAYVSK 515


>gi|423138020|ref|ZP_17125663.1| MutS2 protein [Fusobacterium nucleatum subsp. animalis F0419]
 gi|371958582|gb|EHO76291.1| MutS2 protein [Fusobacterium nucleatum subsp. animalis F0419]
          Length = 778

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 194/690 (28%), Positives = 331/690 (47%), Gaps = 125/690 (18%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L   E+  +   LR V     KL        D L +Y  L E + N   L  +E+ I
Sbjct: 82  GTYLEVEELWDINVNLRTVRIFKSKL--------DELGKYKQLRETIGNIPNLRLIEDVI 133

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
              I+ +  I  D AS DL  IR  +K     L+  +K+   ++F+    +    + +IT
Sbjct: 134 NKTINAEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQERIIT 188

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
           +R  RM   +K   K L+  GI  + SSSG T F+EP   V  NN    L   E  E   
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247

Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
           IL L  AE+ ++ ++ I  + ++V+ +D+  A++ +A       P +S++  +S      
Sbjct: 248 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENRCEIPTVSNREILS------ 300

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
           +E  +HP +                                     D  VP+  ++  + 
Sbjct: 301 LEKARHPFI-----------------------------------DKDKVVPLTFEIGKDY 325

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
            +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385

Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           LS+FS H+  + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++   + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY+ +      +   E A+ EF+ +TL PTYR+L G  G+SNAL IA+ +G    II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505

Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
                      +K++E ++ + Q+     E +  L EE R L+ +     +L  E     
Sbjct: 506 KAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564

Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
            I   Y E E    ++  +A+ L  K         + +Q+Q+ LN               
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610

Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
                    +++ ++E ++    +V+  +   +F V            G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQ 648

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
            A ++++    ++ +VQ G +++ V  N I
Sbjct: 649 FANILKINTSKESAMVQAGILKLEVPFNEI 678


>gi|116494335|ref|YP_806069.1| MutS family ATPase [Lactobacillus casei ATCC 334]
 gi|122264237|sp|Q03AZ5.1|MUTS2_LACC3 RecName: Full=MutS2 protein
 gi|116104485|gb|ABJ69627.1| MutS family ATPase [Lactobacillus casei ATCC 334]
          Length = 786

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 212/744 (28%), Positives = 354/744 (47%), Gaps = 92/744 (12%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G  +VQ  Q P    +   Q L      A A+     + +  +E+I   L     G +L+
Sbjct: 27  GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
             E+ ++ R L+ V+ + K LT+   ++D      +  L  L ++   L +L  ++   +
Sbjct: 86  GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
           D    +  D AS  L  +R       E + S+  ++  ++       Q+  +  P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R  + +KA ++     G+  + S++G T F+EP+  V  NN       +E+AE   IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
           + L+ E+A    +IK     +   D   A+A  A+      P+      VS D+ + +  
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
            +HPL+               +P K         VG+            DI +  + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
           VITGPNTGGKT ++KTLGL  LM ++GL++PA +  R+  FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389

Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
           FS H+  IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL  + +     V TTHY 
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449

Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
           +L        +  NA+ EF  +TL+PTYR+L G  G SNA +I+  +G    I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPGVIVERAKSM 509

Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
           +         H  + +   L ++R+  E+       Q   A S+H E+   Y++   E +
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-R 563

Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIA 646
           D   + A  KA         ++ A+ + D +++   + QL +    + N LI    +A  
Sbjct: 564 DAQLQQAKDKANTL------VDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613

Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
           A+ + H+  P     +            G++V V S  D+  T++E   D     VQ G 
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671

Query: 705 MRVRVKKNNIRPIPNSKRKNAANP 728
           ++++V  + ++ I +SK+  A  P
Sbjct: 672 LKMKVPTDELKKIKSSKQSAAQRP 695


>gi|418961600|ref|ZP_13513485.1| DNA mismatch repair protein [Lactobacillus salivarius SMXD51]
 gi|380343695|gb|EIA32043.1| DNA mismatch repair protein [Lactobacillus salivarius SMXD51]
          Length = 786

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 198/642 (30%), Positives = 309/642 (48%), Gaps = 97/642 (15%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
           DI G LNS          E+ A+ R LRA N V +   + A    D+  +   L + +  
Sbjct: 79  DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125

Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIF 161
              L E+ +K+   I+    +  D AS  L+ IR +     +   E L+S  +   ++  
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNSYTRGTNSKY- 183

Query: 162 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 221
               +   ++T R  R  + +K  ++     GI  + SSSG T F+EP   VE NN   R
Sbjct: 184 ----LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---R 235

Query: 222 LSNSEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
           L   ++AE      IL  L+ E+A    E+      +  +D   A+A +A  +    PIL
Sbjct: 236 LRQQQVAEREEINRILEELSEELAPYTHELNNNAKILGMLDFTNAKAKYAHSIKATEPIL 295

Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
           S ++ V       +  + HPLL                 +K  V+N              
Sbjct: 296 SKENDVY------LRQVWHPLL----------------DMKKAVKN-------------- 319

Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
                DI +  + + +VITGPNTGGKT ++KTLGL  LM ++GLY+PA    R+  F  I
Sbjct: 320 -----DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNI 374

Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
            ADIGD QS+EQ+LSTFS H++ IV+IL+ +  +SLVL DE+G+GTDP EG ALA SIL 
Sbjct: 375 FADIGDEQSIEQSLSTFSSHMTNIVEILKDIDEKSLVLFDELGAGTDPQEGAALAISILD 434

Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
            +  +    V TTHY +L     +     NA+ EF + TL+PTYR+L G  G SNA +I+
Sbjct: 435 AVGAKGSYVVATTHYPELKAYGFERPNTINASMEFDVNTLQPTYRLLIGIPGRSNAFDIS 494

Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASL 571
           + +G D+ I+  A++L       +     +E+   L+ +R   E +        R A  L
Sbjct: 495 QRLGLDKMIVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEEL 549

Query: 572 HAEIMDLYREIEDEAKDLDRRA---AHLKAKETQQVQQEL--NFAKVQIDTVVQDFENQL 626
           H ++   + + E + +++  +A   A+   +ET++   EL     K+++  V    E  L
Sbjct: 550 HHDLEANFHQFERQKENMLEQAKEKANQIVEETKKKSDELISELRKMKMSAVSNIEEKNL 609

Query: 627 RDASADEINSLIKESESAIAAIV-------EAHRPDDDFSVS 661
            DA    +N+L +E+      ++       E H P+DD  V+
Sbjct: 610 IDAQG-RVNALHQETNLKKNKVLRKAKKQQELH-PNDDVMVN 649


>gi|228959681|ref|ZP_04121358.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|423628578|ref|ZP_17604327.1| MutS2 family protein [Bacillus cereus VD154]
 gi|228799984|gb|EEM46924.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|401269103|gb|EJR75138.1| MutS2 family protein [Bacillus cereus VD154]
          Length = 633

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 265/520 (50%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + KK 
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKI-KKF 105

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
               E        ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 106 MLGKEF-------FAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGK------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ K+  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLNFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYFAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLKRAKEYM 507


>gi|423436933|ref|ZP_17413914.1| MutS2 family protein [Bacillus cereus BAG4X12-1]
 gi|401121264|gb|EJQ29055.1| MutS2 family protein [Bacillus cereus BAG4X12-1]
          Length = 633

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 266/520 (51%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQ------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ K+  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLNFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYLTGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYM 507


>gi|423367459|ref|ZP_17344891.1| MutS2 family protein [Bacillus cereus VD142]
 gi|401084009|gb|EJP92259.1| MutS2 family protein [Bacillus cereus VD142]
          Length = 633

 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 266/520 (51%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P+E+ +V   LR    + K +
Sbjct: 47  LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNG--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVLENIYHIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGK------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ ++  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  FD +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFDNVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + + +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLTGCITIASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     ++QRA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLQRAKEYM 507


>gi|218232809|ref|YP_002368190.1| MutS family protein [Bacillus cereus B4264]
 gi|229047158|ref|ZP_04192774.1| DNA mismatch repair protein [Bacillus cereus AH676]
 gi|296503988|ref|YP_003665688.1| DNA mismatch repair protein mutS [Bacillus thuringiensis BMB171]
 gi|423586119|ref|ZP_17562206.1| MutS2 family protein [Bacillus cereus VD045]
 gi|423649351|ref|ZP_17624921.1| MutS2 family protein [Bacillus cereus VD169]
 gi|423656349|ref|ZP_17631648.1| MutS2 family protein [Bacillus cereus VD200]
 gi|218160766|gb|ACK60758.1| putative MutS family protein [Bacillus cereus B4264]
 gi|228724189|gb|EEL75530.1| DNA mismatch repair protein [Bacillus cereus AH676]
 gi|296325040|gb|ADH07968.1| DNA mismatch repair protein mutS [Bacillus thuringiensis BMB171]
 gi|401231147|gb|EJR37651.1| MutS2 family protein [Bacillus cereus VD045]
 gi|401283680|gb|EJR89564.1| MutS2 family protein [Bacillus cereus VD169]
 gi|401291468|gb|EJR97144.1| MutS2 family protein [Bacillus cereus VD200]
          Length = 633

 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 266/520 (51%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQ------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ K+  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLNFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYFAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLKRAKEYM 507


>gi|75761639|ref|ZP_00741589.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74490881|gb|EAO54147.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 638

 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 270/528 (51%), Gaps = 67/528 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           SL+  +  LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR 
Sbjct: 44  SLKVVRNRLNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRG 103

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
              + K + +         + ++P+L    N   +TE   +EE+I F I    + +   A
Sbjct: 104 CRKIKKFMLDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AA 151

Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHK 187
           S++L+ IR     N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K
Sbjct: 152 SKELKRIR----NNIDSVDGKIKERLMKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYK 207

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +   I +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   
Sbjct: 208 NQVAGSI-IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYS 266

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           IK  M+ + + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G     
Sbjct: 267 IKINMELISQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQ---- 316

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                                            VP+  K+  E R ++ITGPN GGKT  
Sbjct: 317 --------------------------------VVPLHFKIGQEYRSLIITGPNAGGKTIV 344

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL +L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ 
Sbjct: 345 LKTIGLLTLATMSGLHIAGDRGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMR 404

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
           + +  +L+L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F 
Sbjct: 405 MSNNNTLLLFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFM 464

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           NAA +F+ ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 465 NAAMQFNSETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYM 512


>gi|414084421|ref|YP_006993129.1| mutS2 family protein [Carnobacterium maltaromaticum LMA28]
 gi|412998005|emb|CCO11814.1| mutS2 family protein [Carnobacterium maltaromaticum LMA28]
          Length = 788

 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 206/686 (30%), Positives = 326/686 (47%), Gaps = 83/686 (12%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G +L+  EI  + + LR    V +   + +E+ G  L R   L EL+     L  L + I
Sbjct: 81  GAMLNGIEIAQIGKVLRTTTEVTRFFDDLSEI-GVELFR---LYELVAKLVTLPTLNQMI 136

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLIT 172
              ID    + +D AS+ L+ IR   KR+  N    LDSL++   AQ      +   L+T
Sbjct: 137 REAIDEDGHV-MDDASQALKGIRTGMKRSESNIREKLDSLIRGKNAQY-----LSDALVT 190

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
            R  R  + +KA ++     G+  + SS+G T F+EP+  V+ NN   +L   E  E   
Sbjct: 191 MRNDRYVIPVKAEYRNHF-GGVVHDQSSTGQTLFIEPQSVVDLNNKLRQLQIEERQEIDR 249

Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
           IL+ L+ EIA    EI   M  + ++D   A+A + + +    P+++ ++ V F  +   
Sbjct: 250 ILAELSNEIAPYGAEILNNMFLLGKLDFIGAKAAYGKNIKATRPLVNEENDVRFIQA--- 306

Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
              +HPL+                  K  V N                   DI +  + +
Sbjct: 307 ---RHPLI----------------DEKQAVAN-------------------DILIGGDYQ 328

Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
            +VITGPNTGGKT ++KTLGL  LM ++GL LP     ++  F  + ADIGD QS+EQ+L
Sbjct: 329 ALVITGPNTGGKTITLKTLGLLQLMGQSGLQLPVAEGSQMGIFTEVFADIGDEQSIEQSL 388

Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG----LAV 468
           STFS H++ IV IL  +  +SL+L DE+G+GTDP EG ALA +IL    D+VG      +
Sbjct: 389 STFSSHMTNIVSILNKIDDKSLILFDELGAGTDPQEGAALAIAIL----DQVGAVGSYVM 444

Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
            TTHY +L           NA+ EF +ETL PTYR+L G  G SNA  I+K +G D  +I
Sbjct: 445 ATTHYPELKAYGYNRPGTINASMEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLDTAVI 504

Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
             A+ L+     + +    +E+   L   R+  E +         E   LY+++    + 
Sbjct: 505 DSARSLI-----DGESQNLNEMIADLENRRKMTEMEYHEVRQYVEEAETLYQDLTTALEQ 559

Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAI 645
                  L  K  ++  Q ++ A+ +   +V D    QL      +    IKE E   A 
Sbjct: 560 FFGEREDLVKKAREKANQIVSEAEEEASKIVSDLRKMQL----TGQFEGGIKEHELIDAK 615

Query: 646 AAIVEAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
           + +   H  +      V +   +    + G++V V S G +   + +V G++   LVQ G
Sbjct: 616 SKLANLHHEETLTKNKVLKKAKAKQQFKKGDEVIVASYGQRGTLMEKVEGNN--WLVQLG 673

Query: 704 KMRVRVKKNNI---RPIPNSKRKNAA 726
            +++++K++++   +P     RK  A
Sbjct: 674 ILKMKIKESDMTLAQPEKEPTRKMVA 699


>gi|417810043|ref|ZP_12456724.1| DNA mismatch repair protein [Lactobacillus salivarius GJ-24]
 gi|335350967|gb|EGM52463.1| DNA mismatch repair protein [Lactobacillus salivarius GJ-24]
          Length = 786

 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 180/584 (30%), Positives = 283/584 (48%), Gaps = 76/584 (13%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
           DI G LNS          E+ A+ R LRA N V +   + A    D+  +   L + +  
Sbjct: 79  DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125

Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIF 161
              L E+ +K+   I+    +  D AS  L+ IR +     +   E L+S  +   ++  
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNSYTRGTNSKY- 183

Query: 162 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 221
               +   ++T R  R  + +K  ++     GI  + SSSG T F+EP   VE NN   R
Sbjct: 184 ----LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---R 235

Query: 222 LSNSEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
           L   ++AE      IL  L+ E+A    E+      +  +D   A+A +A  +    PIL
Sbjct: 236 LRQQQVAEREEINRILEELSEELAPYTHELNNNAKILGMLDFTNAKAKYAHSIKATEPIL 295

Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
           S ++ V       +  + HPLL                 +K  V+N              
Sbjct: 296 SKENDVY------LRQVWHPLL----------------DMKKAVKN-------------- 319

Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
                DI +  + + +VITGPNTGGKT ++KTLGL  LM ++GLY+PA    R+  F  I
Sbjct: 320 -----DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNI 374

Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
            ADIGD QS+EQ+LSTFS H++ IV+IL+ +  +SLVL DE+G+GTDP EG ALA SIL 
Sbjct: 375 FADIGDEQSIEQSLSTFSSHMTNIVEILKDIDEKSLVLFDELGAGTDPQEGAALAISILD 434

Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
            +  +    V TTHY +L     +     NA+ EF + TL+PTYR+L G  G SNA +I+
Sbjct: 435 AVGAKGSYVVATTHYPELKAYGFERPNTINASMEFDVNTLQPTYRLLIGIPGRSNAFDIS 494

Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
           + +G D+ I+  A++L       +     +E+   L+ +R   E +  T      E  +L
Sbjct: 495 QRLGLDKMIVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEITYRKYLREAEEL 549

Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
           + ++E      +R+  ++  +  ++  Q +   K + D ++ + 
Sbjct: 550 HHDLEANFHQFERQKENMLEQAKEKANQIVEETKKKSDELISEL 593


>gi|296327726|ref|ZP_06870266.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296155164|gb|EFG95941.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 778

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 194/699 (27%), Positives = 337/699 (48%), Gaps = 125/699 (17%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L   E+  +   LR V     +L        D L +Y  L E++ N   L  +E+ I
Sbjct: 82  GTYLEVEELWNINVNLRTVRIFKSRL--------DELGKYKQLREMIGNIPNLRVIEDVI 133

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
              I+ +  I  D AS DL  IR  +K     L+  +K+   ++F+    +    + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQEKIIT 188

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
           +R  RM   +K   K L+  GI  + SSSG T F+EP   V  NN    L   E  E   
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247

Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
           IL L  AE+ ++ ++ I  + ++V+ +D+  A++ +A  ++  C I +    VS    ++
Sbjct: 248 IL-LRIAELLRNNKDDILIIGEKVMYLDILNAKSIYA--VENRCEIPT----VSNKEILS 300

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
           +E  +HP +                                     D   P+  ++  + 
Sbjct: 301 LEKARHPFI-----------------------------------DKDKVTPLTFEIGKDY 325

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
            +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385

Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           LS+FS H+  + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++   + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY+ +      +   E A+ EF+ +TL PTYR+L G  G+SNAL IA+ +G    II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505

Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
                      +K++E ++ + Q+     E +  L EE R L+ +     +L  E     
Sbjct: 506 REYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564

Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
            I   Y E E    ++  +A+ L  K         + +Q+Q+ LN               
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610

Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
                    +++ ++E ++    +V+  +   +F V            G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQ 648

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
            A ++++    ++ +VQ G +++ V  + I+ +   K K
Sbjct: 649 FANILKINTSKESAMVQSGILKLEVPFDEIKIVEEKKEK 687


>gi|228901957|ref|ZP_04066123.1| DNA mismatch repair protein [Bacillus thuringiensis IBL 4222]
 gi|423359564|ref|ZP_17337067.1| MutS2 family protein [Bacillus cereus VD022]
 gi|423562155|ref|ZP_17538431.1| MutS2 family protein [Bacillus cereus MSX-A1]
 gi|434376390|ref|YP_006611034.1| DNA mismatch repair protein mutS [Bacillus thuringiensis HD-789]
 gi|228857640|gb|EEN02134.1| DNA mismatch repair protein [Bacillus thuringiensis IBL 4222]
 gi|401083675|gb|EJP91932.1| MutS2 family protein [Bacillus cereus VD022]
 gi|401201042|gb|EJR07920.1| MutS2 family protein [Bacillus cereus MSX-A1]
 gi|401874947|gb|AFQ27114.1| DNA mismatch repair protein mutS [Bacillus thuringiensis HD-789]
          Length = 633

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 270/528 (51%), Gaps = 67/528 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           SL+  +  LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR 
Sbjct: 39  SLKVVRNRLNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRG 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
              + K + +         + ++P+L    N   +TE   +EE+I F I    + +   A
Sbjct: 99  CRKIKKFMLDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AA 146

Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHK 187
           S++L+ IR     N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K
Sbjct: 147 SKELKRIR----NNIDSVDGKIKERLMKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYK 202

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +   I +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   
Sbjct: 203 NQVAGSI-IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYS 261

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           IK  M+ + + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G     
Sbjct: 262 IKINMELISQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQ---- 311

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                                            VP+  K+  E R ++ITGPN GGKT  
Sbjct: 312 --------------------------------VVPLHFKIGQEYRSLIITGPNAGGKTIV 339

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL +L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ 
Sbjct: 340 LKTIGLLTLATMSGLHIAGDRGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMR 399

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
           + +  +L+L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F 
Sbjct: 400 MSNNNTLLLFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFM 459

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           NAA +F+ ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 460 NAAMQFNSETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYM 507


>gi|19704902|ref|NP_602397.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|81763629|sp|Q8RIK8.1|MUTS2_FUSNN RecName: Full=MutS2 protein
 gi|19712795|gb|AAL93696.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 778

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 194/699 (27%), Positives = 337/699 (48%), Gaps = 125/699 (17%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L   E+  +   LR V     +L        D L +Y  L E++ N   L  +E+ I
Sbjct: 82  GTYLEVEELWNINVNLRTVRIFKSRL--------DELGKYKQLREMIGNIPNLRVIEDVI 133

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
              I+ +  I  D AS DL  IR  +K     L+  +K+   ++F+    +    + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQEKIIT 188

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
           +R  RM   +K   K L+  GI  + SSSG T F+EP   V  NN    L   E  E   
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247

Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
           IL L  AE+ ++ ++ I  + ++V+ +D+  A++ +A  ++  C I +    VS    ++
Sbjct: 248 IL-LRIAELLRNNKDDILIIGEKVMYLDILNAKSIYA--VENRCEIPT----VSNKEILS 300

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
           +E  +HP +                                     D   P+  ++  + 
Sbjct: 301 LEKARHPFI-----------------------------------DKDKVTPLTFEIGKDY 325

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
            +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385

Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           LS+FS H+  + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++   + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY+ +      +   E A+ EF+ +TL PTYR+L G  G+SNAL IA+ +G    II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505

Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
                      +K++E ++ + Q+     E +  L EE R L+ +     +L  E     
Sbjct: 506 REYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564

Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
            I   Y E E    ++  +A+ L  K         + +Q+Q+ LN               
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610

Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
                    +++ ++E ++    +V+  +   +F V            G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQ 648

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
            A ++++    ++ +VQ G +++ V  + I+ +   K K
Sbjct: 649 FANILKINTSKESAMVQSGILKLEVPFDEIKIVEEKKEK 687


>gi|228953749|ref|ZP_04115789.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229070921|ref|ZP_04204149.1| DNA mismatch repair protein [Bacillus cereus F65185]
 gi|229080685|ref|ZP_04213204.1| DNA mismatch repair protein [Bacillus cereus Rock4-2]
 gi|423425531|ref|ZP_17402562.1| MutS2 family protein [Bacillus cereus BAG3X2-2]
 gi|423503867|ref|ZP_17480459.1| MutS2 family protein [Bacillus cereus HD73]
 gi|449090385|ref|YP_007422826.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
           kurstaki str. HD73]
 gi|228702623|gb|EEL55090.1| DNA mismatch repair protein [Bacillus cereus Rock4-2]
 gi|228712311|gb|EEL64258.1| DNA mismatch repair protein [Bacillus cereus F65185]
 gi|228805983|gb|EEM52562.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|401112022|gb|EJQ19903.1| MutS2 family protein [Bacillus cereus BAG3X2-2]
 gi|402458307|gb|EJV90056.1| MutS2 family protein [Bacillus cereus HD73]
 gi|449024142|gb|AGE79305.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
           kurstaki str. HD73]
          Length = 633

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 266/520 (51%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQ------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ K+  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLNFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYLTGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYM 507


>gi|228966365|ref|ZP_04127419.1| DNA mismatch repair protein [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|402559246|ref|YP_006601970.1| DNA mismatch repair protein mutS [Bacillus thuringiensis HD-771]
 gi|228793294|gb|EEM40843.1| DNA mismatch repair protein [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|401787898|gb|AFQ13937.1| DNA mismatch repair protein mutS [Bacillus thuringiensis HD-771]
          Length = 633

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 270/528 (51%), Gaps = 67/528 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           SL+  +  LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR 
Sbjct: 39  SLKVVRNRLNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRG 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
              + K + +         + ++P+L    N   +TE   +EE+I F I    + +   A
Sbjct: 99  CRKIKKFMLDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AA 146

Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHK 187
           S++L+ IR     N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K
Sbjct: 147 SKELKRIR----NNIDSVDGKIKERLMKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYK 202

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +   I +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   
Sbjct: 203 NQVAGSI-IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYS 261

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           IK  M+ + + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G     
Sbjct: 262 IKINMELISQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQ---- 311

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                                            VP+  K+  E R ++ITGPN GGKT  
Sbjct: 312 --------------------------------VVPLHFKIGQEYRSLIITGPNAGGKTIV 339

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL +L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ 
Sbjct: 340 LKTIGLLTLATMSGLHIAGDRGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMR 399

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
           + +  +L+L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F 
Sbjct: 400 MSNNNTLLLFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFM 459

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           NAA +F+ ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 460 NAAMQFNSETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYM 507


>gi|227873347|ref|ZP_03991608.1| recombination and DNA strand exchange inhibitor protein MutS2
           [Oribacterium sinus F0268]
 gi|227840825|gb|EEJ51194.1| recombination and DNA strand exchange inhibitor protein MutS2
           [Oribacterium sinus F0268]
          Length = 787

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 200/659 (30%), Positives = 308/659 (46%), Gaps = 84/659 (12%)

Query: 80  KKLTEAAELDGDSLQRY----SPLLEL---LKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
           KK  +  E   D+LQ Y    +PL ++   L+ C  L+E E             + D AS
Sbjct: 100 KKAKDQGEEREDALQEYFQALAPLDDIRRELQRC-ILSEEE-------------LADDAS 145

Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
            +L  +R + K   E ++  L ++         +  P+IT R  R    +KA +K     
Sbjct: 146 PELSQLRRKEKGLEEKINQELNRILQH--NRSMLQDPVITLRNGRHVFPVKAEYKNAF-R 202

Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
           GI  + SSSGAT FMEP   V+  N    L + E  E   IL  L+  +A    E+   +
Sbjct: 203 GIIHDESSSGATLFMEPFSIVQLENDMRELLSLEKKEVEKILLQLSLSLAPFTEELGENV 262

Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSH-VSFDSSINIEGIKHPLLLGSSLRSLSAA 311
             +  +D  FA+A  A  MDGV PIL+ +   V  D+       +HPL+           
Sbjct: 263 KILSHLDFVFAKAKLANKMDGVKPILNQERKTVLLDA-------RHPLI----------- 304

Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
                P                    D  VPI I++  +  ++VITGPNTGGKT  +KTL
Sbjct: 305 -----P-------------------KDKVVPISIRLGDDFSLLVITGPNTGGKTVCLKTL 340

Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
           GL  LM +AGL++PA     +  +  I ADIGD QS+EQ+LSTFS H++  V IL+    
Sbjct: 341 GLFQLMGQAGLFIPAFQGSSITVYREIYADIGDEQSIEQSLSTFSSHMTNTVRILQGARE 400

Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
           + L L DE+G+GTDP+EG ALA +IL +L  +    + TTHYA++          ENAA 
Sbjct: 401 DCLCLFDELGAGTDPTEGAALALAILDHLFQKGIRTLATTHYAEVKLYALSTDGVENAAC 460

Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
            F +E+LRP+Y +L G  G SNA  IA+ +G  + II  A+      R   +     ++ 
Sbjct: 461 AFDVESLRPSYHLLIGVPGKSNAFAIAEKLGLRKDIIASAKN-----RMGEEDLHFEDVI 515

Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
             L   +R  + +        AE+  L +   +  K +++    +  +  ++  Q L  A
Sbjct: 516 ADLENTKRLAQREKEEIERYKAEVESLKQRARESTKGIEKGREKILQRAREEAAQILREA 575

Query: 612 KVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD-FSVSETNTSSFTP 670
           K   D VV+    +LR   A + ++L  E E     + +  R +D+  S +     S T 
Sbjct: 576 KETADQVVK----ELRRQEAGKSSAL--EGEKTRTKLHQKMRENDEALSSTMVKGPSQTI 629

Query: 671 QF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
                  G++V V S+ D +ATV  +P  +    V  G +R +V   ++  I + +++ 
Sbjct: 630 SLKKLAIGDKVRVLSMHDMVATVTTLPDKNGMFTVTAGMLRTKVSAKDVEFIQHKEKEK 688


>gi|422844164|ref|ZP_16890874.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
 gi|325685729|gb|EGD27807.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 787

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 198/618 (32%), Positives = 303/618 (49%), Gaps = 89/618 (14%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           +LD AS DL  +R  R   +     + +K+ A      G  + + ++T R  R  + +K 
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMTAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            ++Y    G+  + S+SG T F+EP   +  NN   RL N  +AEE   +  +  E++  
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259

Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
            RE    IK +   + E+D   A+A  A+ M    P LS+      D S  + G +HPL+
Sbjct: 260 AREEMEAIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313

Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
                          +P                    D  V  DI +  +   ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338

Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
           TGGKT ++KT GL  LM+++GL++PA     +  FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398

Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
            IV I++ VS +SLVLIDEIG+GTDP EG  LA SIL + R +    +VTTHY +L    
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGARLAISILDFFRKKGAKIIVTTHYPELKLYG 458

Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
               R  NA+ EF ++TL PTYR+  G  G SNA  IA+ +G    ++  A+KL+     
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVAGAEKLMSSDDS 518

Query: 541 ERQQHRKSELYQS---LMEERRKLESQARTAASLHAEI---MDLYREIEDEAKD--LDR- 591
           +   H   EL +    + E ++KL++    A  L  ++   +D+Y +   +  D  LDR 
Sbjct: 519 DI-NHMIDELNKQTKLVTENKQKLQTSLDRAKQLEKKLQDALDIYNQRVQKQLDFALDRA 577

Query: 592 -RAAHLKAKETQQVQQELNFAK---VQIDTVVQDFENQLRDASADEINSLIKESESAIAA 647
                 K K+  ++  EL  A+   +Q+ T      NQL DA   E N L K+       
Sbjct: 578 NEIVAKKRKKADKIIAELEEARKEGMQVKT------NQLMDAKG-EFNQLAKQ------- 623

Query: 648 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
             EA+   +   V +        Q G++V V S G +  TV +  G+ D   V  G++++
Sbjct: 624 --EANLAKN--KVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHD-YEVSLGRIKL 677

Query: 708 RVKKNNIRPIPNSKRKNA 725
           +V   +I  +   +++ A
Sbjct: 678 KVTDRDIDKLAAGQKQQA 695


>gi|257882656|ref|ZP_05662309.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,502]
 gi|294622756|ref|ZP_06701711.1| MutS2 family protein [Enterococcus faecium U0317]
 gi|416132269|ref|ZP_11597881.1| MutS2 family protein [Enterococcus faecium E4452]
 gi|424795296|ref|ZP_18221164.1| MutS2 family protein [Enterococcus faecium S447]
 gi|424855055|ref|ZP_18279381.1| MutS2 family protein [Enterococcus faecium R499]
 gi|424950176|ref|ZP_18365348.1| MutS2 family protein [Enterococcus faecium R496]
 gi|424957193|ref|ZP_18371933.1| MutS2 family protein [Enterococcus faecium R446]
 gi|424960033|ref|ZP_18374581.1| MutS2 family protein [Enterococcus faecium P1986]
 gi|424966350|ref|ZP_18380154.1| MutS2 family protein [Enterococcus faecium P1140]
 gi|424994917|ref|ZP_18406830.1| MutS2 family protein [Enterococcus faecium ERV168]
 gi|424998362|ref|ZP_18410055.1| MutS2 family protein [Enterococcus faecium ERV165]
 gi|425001768|ref|ZP_18413255.1| MutS2 family protein [Enterococcus faecium ERV161]
 gi|425004274|ref|ZP_18415594.1| MutS2 family protein [Enterococcus faecium ERV102]
 gi|425012205|ref|ZP_18423037.1| MutS2 family protein [Enterococcus faecium E422]
 gi|425018028|ref|ZP_18428507.1| MutS2 family protein [Enterococcus faecium C621]
 gi|425032607|ref|ZP_18437636.1| MutS2 family protein [Enterococcus faecium 515]
 gi|430827998|ref|ZP_19446128.1| MutS2 protein [Enterococcus faecium E0269]
 gi|431746632|ref|ZP_19535457.1| MutS2 protein [Enterococcus faecium E2134]
 gi|431767631|ref|ZP_19556078.1| MutS2 protein [Enterococcus faecium E1321]
 gi|431775339|ref|ZP_19563612.1| MutS2 protein [Enterococcus faecium E2560]
 gi|431780207|ref|ZP_19568392.1| MutS2 protein [Enterococcus faecium E4389]
 gi|431781496|ref|ZP_19569643.1| MutS2 protein [Enterococcus faecium E6012]
 gi|431786129|ref|ZP_19574145.1| MutS2 protein [Enterococcus faecium E6045]
 gi|257818314|gb|EEV45642.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,502]
 gi|291597807|gb|EFF28944.1| MutS2 family protein [Enterococcus faecium U0317]
 gi|364093369|gb|EHM35646.1| MutS2 family protein [Enterococcus faecium E4452]
 gi|402924563|gb|EJX44761.1| MutS2 family protein [Enterococcus faecium S447]
 gi|402931801|gb|EJX51358.1| MutS2 family protein [Enterococcus faecium R499]
 gi|402933643|gb|EJX53063.1| MutS2 family protein [Enterococcus faecium R496]
 gi|402944145|gb|EJX62582.1| MutS2 family protein [Enterococcus faecium R446]
 gi|402949000|gb|EJX67094.1| MutS2 family protein [Enterococcus faecium P1986]
 gi|402956711|gb|EJX74151.1| MutS2 family protein [Enterococcus faecium P1140]
 gi|402978799|gb|EJX94516.1| MutS2 family protein [Enterococcus faecium ERV168]
 gi|402983441|gb|EJX98841.1| MutS2 family protein [Enterococcus faecium ERV165]
 gi|402985390|gb|EJY00600.1| MutS2 family protein [Enterococcus faecium ERV161]
 gi|402990027|gb|EJY04923.1| MutS2 family protein [Enterococcus faecium ERV102]
 gi|402994063|gb|EJY08626.1| MutS2 family protein [Enterococcus faecium E422]
 gi|403003183|gb|EJY17093.1| MutS2 family protein [Enterococcus faecium C621]
 gi|403012545|gb|EJY25764.1| MutS2 family protein [Enterococcus faecium 515]
 gi|430484079|gb|ELA61114.1| MutS2 protein [Enterococcus faecium E0269]
 gi|430608534|gb|ELB45780.1| MutS2 protein [Enterococcus faecium E2134]
 gi|430630584|gb|ELB66939.1| MutS2 protein [Enterococcus faecium E1321]
 gi|430640686|gb|ELB76520.1| MutS2 protein [Enterococcus faecium E4389]
 gi|430643055|gb|ELB78811.1| MutS2 protein [Enterococcus faecium E2560]
 gi|430646202|gb|ELB81696.1| MutS2 protein [Enterococcus faecium E6045]
 gi|430649441|gb|ELB84818.1| MutS2 protein [Enterococcus faecium E6012]
          Length = 786

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNTYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|90962080|ref|YP_535996.1| DNA mismatch repair protein [Lactobacillus salivarius UCC118]
 gi|227891101|ref|ZP_04008906.1| DNA mismatch repair protein [Lactobacillus salivarius ATCC 11741]
 gi|122448818|sp|Q1WT38.1|MUTS2_LACS1 RecName: Full=MutS2 protein
 gi|90821274|gb|ABD99913.1| DNA mismatch repair protein [Lactobacillus salivarius UCC118]
 gi|227866975|gb|EEJ74396.1| DNA mismatch repair protein [Lactobacillus salivarius ATCC 11741]
          Length = 786

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 197/638 (30%), Positives = 304/638 (47%), Gaps = 89/638 (13%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
           DI G LNS          E+ A+ R LRA N V +   + A    D+  +   L + +  
Sbjct: 79  DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125

Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG 165
              L E+ +K+   I+    +  D AS  L+ IR +     E +   L         +  
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNAYTRGT-NSKY 183

Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
           +   ++T R  R  + +K  ++     GI  + SSSG T F+EP   VE NN   RL   
Sbjct: 184 LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQ 239

Query: 226 EIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
           ++AE      IL  L+ E+A    E+      +  +D   A+A +A  +    PILS ++
Sbjct: 240 QVAEREEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKATEPILSKEN 299

Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
            V       +  + HPLL                 +K  V+N                  
Sbjct: 300 DVY------LRQVWHPLL----------------DMKKAVKN------------------ 319

Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
            DI +  + + +VITGPNTGGKT ++KTLGL  LM ++GLY+PA    R+  FD I ADI
Sbjct: 320 -DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADI 378

Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
           GD QS+EQ+LSTFS H++ IV+IL+ +  +SLVL DE+G+GTDP EG ALA SIL  +  
Sbjct: 379 GDEQSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGA 438

Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
           +    V TTHY +L     +     NA+ EF   TL+PTYR+L G  G SNA +I++ +G
Sbjct: 439 KGSYVVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLG 498

Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASLHAEI 575
            D+ I+  A++L       +     +E+   L+ +R   E +        R A  LH ++
Sbjct: 499 LDKMIVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHDL 553

Query: 576 MDLYREIEDEAKDLDRRA---AHLKAKETQQVQQEL--NFAKVQIDTVVQDFENQLRDAS 630
              + + E + +++  +A   A+   +ET++   EL     K+++       E  L DA 
Sbjct: 554 ETNFHQFERQKENMLEQAKERANQIVEETKKKSDELISELRKMKMSAASNIEEGSLIDAQ 613

Query: 631 ADEINSLIKESESAIAAIV-------EAHRPDDDFSVS 661
              +N+L +E+      ++       E H P+DD  V+
Sbjct: 614 G-RVNALHQETNLKKNKVLRKAKQQQELH-PNDDVMVN 649


>gi|336419167|ref|ZP_08599433.1| MutS2 protein [Fusobacterium sp. 11_3_2]
 gi|336163858|gb|EGN66772.1| MutS2 protein [Fusobacterium sp. 11_3_2]
          Length = 778

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 193/690 (27%), Positives = 331/690 (47%), Gaps = 125/690 (18%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L   E+  +   LR V     KL        D L +Y  L E + N   L  +E+ I
Sbjct: 82  GTYLEVEELWDINVNLRTVRIFKSKL--------DELGKYKQLRETIGNIPNLRVIEDVI 133

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
              I+ +  I  D AS DL  IR  +K     L+  +K+   ++F+    +    + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQERIIT 188

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
           +R  RM   +K   K L+  GI  + SSSG T F+EP   V  NN    L   E  E   
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247

Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
           IL L  AE+ ++ ++ I  + ++V+ +D+  A++ +A       P +S++  +S + +  
Sbjct: 248 IL-LRIAELLRNNKDDILIIGEKVMYLDILNAKSIYANENRCEIPTVSNKEILSLEKA-- 304

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
               +HP +                                     D  VP+  ++  + 
Sbjct: 305 ----RHPFI-----------------------------------DKDKVVPLTFEIGKDY 325

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
            +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385

Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           LS+FS H+  + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++   + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY+ +      +   E A+ EF+ +TL PTYR+L G  G+SNAL IA+ +G    II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505

Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
                      +K++E ++ + Q+     E +  L EE R L+ +     +L  E     
Sbjct: 506 REYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564

Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
            I   Y E E    ++  +A+ L  K         + +Q+Q+ LN               
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610

Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
                    +++ ++E ++    +V+  +   +F V            G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQ 648

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
            A ++++    ++ +VQ G +++ V  N I
Sbjct: 649 FANILKINTSKESAMVQAGILKLEVPFNEI 678


>gi|301300876|ref|ZP_07207048.1| recombination and DNA strand exchange inhibitor protein
           [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300851475|gb|EFK79187.1| recombination and DNA strand exchange inhibitor protein
           [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 786

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 197/638 (30%), Positives = 304/638 (47%), Gaps = 89/638 (13%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
           DI G LNS          E+ A+ R LRA N V +   + A    D+  +   L + +  
Sbjct: 79  DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125

Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG 165
              L E+ +K+   I+    +  D AS  L+ IR +     E +   L         +  
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNAYTRGT-NSKY 183

Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
           +   ++T R  R  + +K  ++     GI  + SSSG T F+EP   VE NN   RL   
Sbjct: 184 LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQ 239

Query: 226 EIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
           ++AE      IL  L+ E+A    E+      +  +D   A+A +A  +    PILS ++
Sbjct: 240 QVAEREEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKATEPILSKEN 299

Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
            V       +  + HPLL                 +K  V+N                  
Sbjct: 300 DVY------LRQVWHPLL----------------DMKKAVKN------------------ 319

Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
            DI +  + + +VITGPNTGGKT ++KTLGL  LM ++GLY+PA    R+  FD I ADI
Sbjct: 320 -DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADI 378

Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
           GD QS+EQ+LSTFS H++ IV+IL+ +  +SLVL DE+G+GTDP EG ALA SIL  +  
Sbjct: 379 GDEQSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGA 438

Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
           +    V TTHY +L     +     NA+ EF   TL+PTYR+L G  G SNA +I++ +G
Sbjct: 439 KGSYVVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLG 498

Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASLHAEI 575
            D+ I+  A++L       +     +E+   L+ +R   E +        R A  LH ++
Sbjct: 499 LDKMIVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHDL 553

Query: 576 MDLYREIEDEAKDLDRRA---AHLKAKETQQVQQEL--NFAKVQIDTVVQDFENQLRDAS 630
              + + E + +++  +A   A+   +ET++   EL     K+++       E  L DA 
Sbjct: 554 ETNFHQFERQKENMLEQAKERANQIVEETKKKSDELISELRKMKMSAASNIEEGSLIDAQ 613

Query: 631 ADEINSLIKESESAIAAIV-------EAHRPDDDFSVS 661
              +N+L +E+      ++       E H P+DD  V+
Sbjct: 614 G-RVNALHQETNLKKNKVLRKAKQQQELH-PNDDVMVN 649


>gi|431546278|ref|ZP_19518903.1| MutS2 protein [Enterococcus faecium E1731]
 gi|430591597|gb|ELB29626.1| MutS2 protein [Enterococcus faecium E1731]
          Length = 786

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|430843631|ref|ZP_19461530.1| MutS2 protein [Enterococcus faecium E1050]
 gi|430497490|gb|ELA73527.1| MutS2 protein [Enterococcus faecium E1050]
          Length = 786

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|425052198|ref|ZP_18455823.1| MutS2 family protein [Enterococcus faecium 506]
 gi|403035239|gb|EJY46637.1| MutS2 family protein [Enterococcus faecium 506]
          Length = 786

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEKVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|430825904|ref|ZP_19444102.1| MutS2 protein [Enterococcus faecium E0164]
 gi|430445612|gb|ELA55342.1| MutS2 protein [Enterococcus faecium E0164]
          Length = 786

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|423616282|ref|ZP_17592116.1| MutS2 family protein [Bacillus cereus VD115]
 gi|401259247|gb|EJR65424.1| MutS2 family protein [Bacillus cereus VD115]
          Length = 633

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 155/521 (29%), Positives = 266/521 (51%), Gaps = 67/521 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVVENIYSIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGN------IHLMNCKHPLLTGQ------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ ++  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +G ++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGFHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           ETL P Y+++ G +G+SNAL IA  +     +++RA++ +E
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLKRAKEYME 508


>gi|430860620|ref|ZP_19478219.1| MutS2 protein [Enterococcus faecium E1573]
 gi|430552018|gb|ELA91768.1| MutS2 protein [Enterococcus faecium E1573]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|424819498|ref|ZP_18244589.1| MutS2 family protein [Enterococcus faecium R501]
 gi|402926153|gb|EJX46215.1| MutS2 family protein [Enterococcus faecium R501]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|229151665|ref|ZP_04279866.1| DNA mismatch repair protein [Bacillus cereus m1550]
 gi|228631726|gb|EEK88354.1| DNA mismatch repair protein [Bacillus cereus m1550]
          Length = 633

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 266/520 (51%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I    + +   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEALEEYQILATLSGMVLENIYSIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQ------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP+  K+  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLHFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYFAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYM 507


>gi|293568794|ref|ZP_06680108.1| MutS2 family protein [Enterococcus faecium E1071]
 gi|430819495|ref|ZP_19438147.1| MutS2 protein [Enterococcus faecium E0045]
 gi|430834320|ref|ZP_19452327.1| MutS2 protein [Enterococcus faecium E0679]
 gi|431149562|ref|ZP_19499420.1| MutS2 protein [Enterococcus faecium E1620]
 gi|431230237|ref|ZP_19502440.1| MutS2 protein [Enterococcus faecium E1622]
 gi|431301457|ref|ZP_19507776.1| MutS2 protein [Enterococcus faecium E1626]
 gi|431764575|ref|ZP_19553112.1| MutS2 protein [Enterococcus faecium E4215]
 gi|291588511|gb|EFF20345.1| MutS2 family protein [Enterococcus faecium E1071]
 gi|430440567|gb|ELA50814.1| MutS2 protein [Enterococcus faecium E0045]
 gi|430485551|gb|ELA62457.1| MutS2 protein [Enterococcus faecium E0679]
 gi|430574223|gb|ELB13001.1| MutS2 protein [Enterococcus faecium E1622]
 gi|430575451|gb|ELB14167.1| MutS2 protein [Enterococcus faecium E1620]
 gi|430580647|gb|ELB19114.1| MutS2 protein [Enterococcus faecium E1626]
 gi|430630715|gb|ELB67064.1| MutS2 protein [Enterococcus faecium E4215]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|289766107|ref|ZP_06525485.1| DNA mismatch repair protein mutS [Fusobacterium sp. D11]
 gi|289717662|gb|EFD81674.1| DNA mismatch repair protein mutS [Fusobacterium sp. D11]
          Length = 778

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 191/685 (27%), Positives = 330/685 (48%), Gaps = 125/685 (18%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L   E+  +   LR V     KL        D L +Y  L E++ N   L  +E+ I
Sbjct: 82  GTYLEVEELWDINVNLRTVRIFKSKL--------DELGKYKQLREMIGNIPNLRVIEDVI 133

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
              I+ +  I  D AS DL  IR  +K     L+  +K+   ++F+    +    + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQERIIT 188

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
           +R  RM   +K   K L+  GI  + SSSG T F+EP   V  NN    L   E  E   
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247

Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
           IL L  AE+ ++ ++ I  + ++V+ +D+  A++ +A       P +S++  +S + +  
Sbjct: 248 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENRCEIPTVSNREILSLEKA-- 304

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
               +HP +                                     D  VP+  ++  + 
Sbjct: 305 ----RHPFI-----------------------------------DKDKVVPLTFEIGKDY 325

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
            +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385

Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           LS+FS H+  + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++   + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY+ +      +   E A+ EF+ +TL PTYR+L G  G+SNAL IA+ +G    II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505

Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
                      +K++E ++ + Q+     E +  L EE R L+ +     +L  E     
Sbjct: 506 REYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564

Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
            I   Y E E    ++  +A+ L  K         + +Q+Q+ LN               
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610

Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
                    +++ ++E ++    +V+  +   +F V            G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQ 648

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRV 709
            A ++++    ++ +VQ G +++ V
Sbjct: 649 FANILKINTSKESAMVQAGILKLEV 673


>gi|69245126|ref|ZP_00603250.1| MutS 2 protein [Enterococcus faecium DO]
 gi|257879660|ref|ZP_05659313.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,230,933]
 gi|257890326|ref|ZP_05669979.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,410]
 gi|260559678|ref|ZP_05831858.1| DNA mismatch repair protein MutS [Enterococcus faecium C68]
 gi|293560080|ref|ZP_06676584.1| MutS2 family protein [Enterococcus faecium E1162]
 gi|294614397|ref|ZP_06694313.1| MutS2 family protein [Enterococcus faecium E1636]
 gi|314938141|ref|ZP_07845446.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium TX0133a04]
 gi|314943818|ref|ZP_07850553.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium TX0133C]
 gi|314949777|ref|ZP_07853087.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium TX0082]
 gi|314951185|ref|ZP_07854243.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium TX0133A]
 gi|314994416|ref|ZP_07859700.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium TX0133B]
 gi|314995612|ref|ZP_07860706.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium TX0133a01]
 gi|383329426|ref|YP_005355310.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium Aus0004]
 gi|389869286|ref|YP_006376709.1| MutS family DNA mismatch repair protein [Enterococcus faecium DO]
 gi|415898673|ref|ZP_11551403.1| MutS2 family protein [Enterococcus faecium E4453]
 gi|424789896|ref|ZP_18216506.1| MutS2 family protein [Enterococcus faecium V689]
 gi|424912749|ref|ZP_18336124.1| MutS2 family protein [Enterococcus faecium R497]
 gi|424955437|ref|ZP_18370273.1| MutS2 family protein [Enterococcus faecium R494]
 gi|424964246|ref|ZP_18378359.1| MutS2 family protein [Enterococcus faecium P1190]
 gi|424970080|ref|ZP_18383617.1| MutS2 family protein [Enterococcus faecium P1139]
 gi|424974783|ref|ZP_18387998.1| MutS2 family protein [Enterococcus faecium P1137]
 gi|424978200|ref|ZP_18391145.1| MutS2 family protein [Enterococcus faecium P1123]
 gi|424980291|ref|ZP_18393093.1| MutS2 family protein [Enterococcus faecium ERV99]
 gi|424983595|ref|ZP_18396176.1| MutS2 family protein [Enterococcus faecium ERV69]
 gi|424987917|ref|ZP_18400268.1| MutS2 family protein [Enterococcus faecium ERV38]
 gi|424991796|ref|ZP_18403927.1| MutS2 family protein [Enterococcus faecium ERV26]
 gi|425007017|ref|ZP_18418168.1| MutS2 family protein [Enterococcus faecium ERV1]
 gi|425016051|ref|ZP_18426638.1| MutS2 family protein [Enterococcus faecium E417]
 gi|425021060|ref|ZP_18431339.1| MutS2 family protein [Enterococcus faecium C497]
 gi|425024153|ref|ZP_18434239.1| MutS2 family protein [Enterococcus faecium C1904]
 gi|425035142|ref|ZP_18439993.1| MutS2 family protein [Enterococcus faecium 514]
 gi|425039209|ref|ZP_18443767.1| MutS2 family protein [Enterococcus faecium 513]
 gi|425041479|ref|ZP_18445872.1| MutS2 family protein [Enterococcus faecium 511]
 gi|425046563|ref|ZP_18450570.1| MutS2 family protein [Enterococcus faecium 510]
 gi|425049153|ref|ZP_18453021.1| MutS2 family protein [Enterococcus faecium 509]
 gi|425060412|ref|ZP_18463707.1| MutS2 family protein [Enterococcus faecium 503]
 gi|430831133|ref|ZP_19449186.1| MutS2 protein [Enterococcus faecium E0333]
 gi|430852078|ref|ZP_19469813.1| MutS2 protein [Enterococcus faecium E1258]
 gi|431003613|ref|ZP_19488711.1| MutS2 protein [Enterococcus faecium E1578]
 gi|431251925|ref|ZP_19503983.1| MutS2 protein [Enterococcus faecium E1623]
 gi|431755260|ref|ZP_19543914.1| MutS2 protein [Enterococcus faecium E2883]
 gi|431771238|ref|ZP_19559624.1| MutS2 protein [Enterococcus faecium E1644]
 gi|431772678|ref|ZP_19561016.1| MutS2 protein [Enterococcus faecium E2369]
 gi|68195969|gb|EAN10402.1| MutS 2 protein [Enterococcus faecium DO]
 gi|257813888|gb|EEV42646.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,230,933]
 gi|257826686|gb|EEV53312.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,410]
 gi|260074346|gb|EEW62668.1| DNA mismatch repair protein MutS [Enterococcus faecium C68]
 gi|291592705|gb|EFF24298.1| MutS2 family protein [Enterococcus faecium E1636]
 gi|291605947|gb|EFF35377.1| MutS2 family protein [Enterococcus faecium E1162]
 gi|313590200|gb|EFR69045.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium TX0133a01]
 gi|313591188|gb|EFR70033.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium TX0133B]
 gi|313596664|gb|EFR75509.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium TX0133A]
 gi|313597542|gb|EFR76387.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium TX0133C]
 gi|313642488|gb|EFS07068.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium TX0133a04]
 gi|313643850|gb|EFS08430.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium TX0082]
 gi|364089863|gb|EHM32509.1| MutS2 family protein [Enterococcus faecium E4453]
 gi|378939120|gb|AFC64192.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus faecium Aus0004]
 gi|388534535|gb|AFK59727.1| MutS family DNA mismatch repair protein [Enterococcus faecium DO]
 gi|402921430|gb|EJX41876.1| MutS2 family protein [Enterococcus faecium V689]
 gi|402927678|gb|EJX47618.1| MutS2 family protein [Enterococcus faecium R497]
 gi|402934061|gb|EJX53454.1| MutS2 family protein [Enterococcus faecium R494]
 gi|402947097|gb|EJX65327.1| MutS2 family protein [Enterococcus faecium P1190]
 gi|402955532|gb|EJX73054.1| MutS2 family protein [Enterococcus faecium P1137]
 gi|402962705|gb|EJX79623.1| MutS2 family protein [Enterococcus faecium P1139]
 gi|402962932|gb|EJX79835.1| MutS2 family protein [Enterococcus faecium P1123]
 gi|402966828|gb|EJX83433.1| MutS2 family protein [Enterococcus faecium ERV99]
 gi|402971214|gb|EJX87503.1| MutS2 family protein [Enterococcus faecium ERV69]
 gi|402973400|gb|EJX89529.1| MutS2 family protein [Enterococcus faecium ERV38]
 gi|402975823|gb|EJX91752.1| MutS2 family protein [Enterococcus faecium ERV26]
 gi|402993517|gb|EJY08117.1| MutS2 family protein [Enterococcus faecium E417]
 gi|402995904|gb|EJY10320.1| MutS2 family protein [Enterococcus faecium ERV1]
 gi|403007752|gb|EJY21300.1| MutS2 family protein [Enterococcus faecium C497]
 gi|403007864|gb|EJY21411.1| MutS2 family protein [Enterococcus faecium C1904]
 gi|403017153|gb|EJY29929.1| MutS2 family protein [Enterococcus faecium 513]
 gi|403018752|gb|EJY31412.1| MutS2 family protein [Enterococcus faecium 514]
 gi|403024013|gb|EJY36210.1| MutS2 family protein [Enterococcus faecium 510]
 gi|403025767|gb|EJY37812.1| MutS2 family protein [Enterococcus faecium 511]
 gi|403028786|gb|EJY40587.1| MutS2 family protein [Enterococcus faecium 509]
 gi|403042608|gb|EJY53554.1| MutS2 family protein [Enterococcus faecium 503]
 gi|430482004|gb|ELA59145.1| MutS2 protein [Enterococcus faecium E0333]
 gi|430542660|gb|ELA82768.1| MutS2 protein [Enterococcus faecium E1258]
 gi|430561702|gb|ELB00956.1| MutS2 protein [Enterococcus faecium E1578]
 gi|430578351|gb|ELB16903.1| MutS2 protein [Enterococcus faecium E1623]
 gi|430617260|gb|ELB54134.1| MutS2 protein [Enterococcus faecium E2883]
 gi|430633763|gb|ELB69917.1| MutS2 protein [Enterococcus faecium E1644]
 gi|430637757|gb|ELB73756.1| MutS2 protein [Enterococcus faecium E2369]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|427396578|ref|ZP_18889337.1| MutS2 protein [Enterococcus durans FB129-CNAB-4]
 gi|431638661|ref|ZP_19523288.1| MutS2 protein [Enterococcus faecium E1904]
 gi|447912185|ref|YP_007393597.1| Recombination inhibitory protein MutS2 [Enterococcus faecium NRRL
           B-2354]
 gi|425723248|gb|EKU86139.1| MutS2 protein [Enterococcus durans FB129-CNAB-4]
 gi|430602140|gb|ELB39719.1| MutS2 protein [Enterococcus faecium E1904]
 gi|445187894|gb|AGE29536.1| Recombination inhibitory protein MutS2 [Enterococcus faecium NRRL
           B-2354]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|431374601|ref|ZP_19510289.1| MutS2 protein [Enterococcus faecium E1627]
 gi|430583225|gb|ELB21614.1| MutS2 protein [Enterococcus faecium E1627]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|430847896|ref|ZP_19465729.1| MutS2 protein [Enterococcus faecium E1133]
 gi|430849196|ref|ZP_19466977.1| MutS2 protein [Enterococcus faecium E1185]
 gi|431748902|ref|ZP_19537654.1| MutS2 protein [Enterococcus faecium E2297]
 gi|430536272|gb|ELA76648.1| MutS2 protein [Enterococcus faecium E1133]
 gi|430538042|gb|ELA78341.1| MutS2 protein [Enterococcus faecium E1185]
 gi|430612427|gb|ELB49467.1| MutS2 protein [Enterococcus faecium E2297]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|336400040|ref|ZP_08580828.1| MutS2 protein [Fusobacterium sp. 21_1A]
 gi|336163237|gb|EGN66169.1| MutS2 protein [Fusobacterium sp. 21_1A]
          Length = 778

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 193/690 (27%), Positives = 331/690 (47%), Gaps = 125/690 (18%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L   E+  +   LR V     KL        D L +Y  L E + N   L  +E+ I
Sbjct: 82  GTYLEVEELWDINVNLRTVRIFKSKL--------DELGKYKQLRETIGNIPNLRLIEDVI 133

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
              I+ +  I  D AS DL  IR  +K     L+  +K+   ++F+    +    + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQERIIT 188

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
           +R  RM   +K   K L+  GI  + SSSG T F+EP   V  NN    L   E  E   
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247

Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
           IL L  AE+ ++ ++ I  + ++V+ +D+  A++ +A       P +S++  +S      
Sbjct: 248 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENKCEIPTVSNREILS------ 300

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
           +E  +HP +                                     D  VP+  ++  + 
Sbjct: 301 LEKARHPFI-----------------------------------DKDKVVPLTFEIGKDY 325

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
            +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385

Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           LS+FS H+  + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++   + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY+ +      +   E A+ EF+ +TL PTYR+L G  G+SNAL IA+ +G    +I +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESVISKA 505

Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
                      +K++E ++ + Q+     E +  L EE R L+ +     +L  E     
Sbjct: 506 REYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564

Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
            I   Y E E    ++  +A+ L  K         + +Q+Q+ LN               
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610

Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
                    +++ ++E ++    +V+  +   +F V            G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQ 648

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
            A ++++    ++ +VQ G +++ V  N I
Sbjct: 649 FANILKINTSKESAMVQAGILKLEVPFNEI 678


>gi|257883965|ref|ZP_05663618.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
 gi|257819803|gb|EEV46951.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|293553120|ref|ZP_06673758.1| MutS2 family protein [Enterococcus faecium E1039]
 gi|430822931|ref|ZP_19441506.1| MutS2 protein [Enterococcus faecium E0120]
 gi|430838514|ref|ZP_19456460.1| MutS2 protein [Enterococcus faecium E0688]
 gi|430857731|ref|ZP_19475364.1| MutS2 protein [Enterococcus faecium E1552]
 gi|430865610|ref|ZP_19481245.1| MutS2 protein [Enterococcus faecium E1574]
 gi|431742713|ref|ZP_19531597.1| MutS2 protein [Enterococcus faecium E2071]
 gi|291602711|gb|EFF32925.1| MutS2 family protein [Enterococcus faecium E1039]
 gi|430442860|gb|ELA52881.1| MutS2 protein [Enterococcus faecium E0120]
 gi|430491756|gb|ELA68208.1| MutS2 protein [Enterococcus faecium E0688]
 gi|430546941|gb|ELA86883.1| MutS2 protein [Enterococcus faecium E1552]
 gi|430552957|gb|ELA92674.1| MutS2 protein [Enterococcus faecium E1574]
 gi|430607682|gb|ELB44983.1| MutS2 protein [Enterococcus faecium E2071]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|261208743|ref|ZP_05923180.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
 gi|289565573|ref|ZP_06446020.1| MutS2 protein [Enterococcus faecium D344SRF]
 gi|260077245|gb|EEW64965.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
 gi|289162655|gb|EFD10508.1| MutS2 protein [Enterococcus faecium D344SRF]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|294617527|ref|ZP_06697157.1| MutS2 family protein [Enterococcus faecium E1679]
 gi|291596133|gb|EFF27396.1| MutS2 family protein [Enterococcus faecium E1679]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|431514071|ref|ZP_19516119.1| MutS2 protein [Enterococcus faecium E1634]
 gi|430586327|gb|ELB24588.1| MutS2 protein [Enterococcus faecium E1634]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|430855305|ref|ZP_19473014.1| MutS2 protein [Enterococcus faecium E1392]
 gi|430547311|gb|ELA87247.1| MutS2 protein [Enterococcus faecium E1392]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|423558950|ref|ZP_17535252.1| MutS2 family protein [Bacillus cereus MC67]
 gi|401190719|gb|EJQ97760.1| MutS2 family protein [Bacillus cereus MC67]
          Length = 633

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 265/520 (50%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P+E+ +V   LR    + K +
Sbjct: 47  LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+++K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSTYKNQVAGNI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N         E  EE  IL+ L+  I ++   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASWKAEEAMEEYQILATLSGMILENIYHIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   H      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGH------IHLVNCKHPLLTGQV----------- 312

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ ++  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + + +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLTGCITIASTHYGEIKRFSEMHGDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     ++QRA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYM 507


>gi|431414518|ref|ZP_19512337.1| MutS2 protein [Enterococcus faecium E1630]
 gi|431759732|ref|ZP_19548343.1| MutS2 protein [Enterococcus faecium E3346]
 gi|430589251|gb|ELB27396.1| MutS2 protein [Enterococcus faecium E1630]
 gi|430625913|gb|ELB62516.1| MutS2 protein [Enterococcus faecium E3346]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGVVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|430946889|ref|ZP_19485669.1| MutS2 protein [Enterococcus faecium E1576]
 gi|430558286|gb|ELA97705.1| MutS2 protein [Enterococcus faecium E1576]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|402556385|ref|YP_006597656.1| MutS family protein [Bacillus cereus FRI-35]
 gi|401797595|gb|AFQ11454.1| MutS family protein [Bacillus cereus FRI-35]
          Length = 633

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 164/574 (28%), Positives = 291/574 (50%), Gaps = 72/574 (12%)

Query: 24  LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNR--IDSAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +V      ++   KHPLL               
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGYV------HLVNCKHPLL--------------- 308

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                S+  VP++ ++    R ++ITGPN GGKT  +KT+GL +
Sbjct: 309 ---------------------SEKVVPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ I  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKDTEIAIFENIFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
           ETL P Y+++ G +G+SNAL IA  +     ++QRA+  +E      ++  +S++ +   
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLQRAKAYMENKEYALEKVNESKIRKPKF 527

Query: 555 MEERRKLESQARTAASLHAEIMD----LYREIED 584
           ++E+R+   + +    ++    D    +Y+EI++
Sbjct: 528 VQEKRENHYEYKIGDRVNLLDYDDFGIIYKEIDN 561


>gi|365159845|ref|ZP_09356021.1| MutS2 family protein [Bacillus sp. 7_6_55CFAA_CT2]
 gi|363624826|gb|EHL75890.1| MutS2 family protein [Bacillus sp. 7_6_55CFAA_CT2]
          Length = 633

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 265/520 (50%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQ------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP+  K+  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLHFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYFAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYM 507


>gi|126650698|ref|ZP_01722914.1| DNA mismatch repair protein [Bacillus sp. B14905]
 gi|126592363|gb|EAZ86381.1| DNA mismatch repair protein [Bacillus sp. B14905]
          Length = 634

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 157/510 (30%), Positives = 250/510 (49%), Gaps = 53/510 (10%)

Query: 24  LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A  ++ ++  +    + +I  I+     G +L PSE+ ++   LR   N+ KK 
Sbjct: 47  LNETTEARVIVDAEGHVPFLGVSNIEHIMTKLAKGMILDPSELISMSDFLRGCRNI-KKF 105

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
               E     L  Y+  +   K+      +EE+I F I      +   AS +L+ IR   
Sbjct: 106 MLDKEFFAPVLSSYASSMAEFKS------VEEEINFAIKANR--VDSAASRELKRIRHHI 157

Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
           +   E +   L K          I +  I+++  R  + IKAS+K  +  G  + +SS G
Sbjct: 158 ETTEEKIKDRLTKFLNNSANKTYIQEFFISQKDERYTIPIKASYKNHV-QGTIVEISSKG 216

Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
           AT FMEP    + N     L   E  EE  IL+ L+  +      +   M+ + + D+ F
Sbjct: 217 ATVFMEPSVVAKLNGELATLKAEEAVEEYQILASLSGLLMDHLHALHINMELISQYDMVF 276

Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
           A+A F++ + G+ P L+    +       I G +HPLL G++                  
Sbjct: 277 AKAKFSKQIGGMEPRLNDYGFIQV-----ING-RHPLLSGNA------------------ 312

Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
                             VP+   +  + R ++ITGPN GGKT  +KT+GL +L + +G 
Sbjct: 313 ------------------VPLQFTIGKDYRSLIITGPNAGGKTVVLKTIGLLTLATMSGF 354

Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
           ++ A     L  FD I  DIGD+QS+E  LSTFS H+  + DI+   +  +L+L DEIGS
Sbjct: 355 HIVADEGTELAIFDHIFVDIGDNQSMENALSTFSSHMKNLSDIMRASNNHTLLLFDEIGS 414

Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
           GT+P+EG ALA +IL+       + V TTHY ++    +    F NAA  F+ ETL P Y
Sbjct: 415 GTEPNEGAALAIAILEEFYQMGCMTVATTHYGEIKRFSEMHPDFMNAAMRFNSETLEPLY 474

Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
           +++ G++G+SNAL I+K +    +++QRAQ
Sbjct: 475 QLMIGTSGESNALWISKKMNVRAEVLQRAQ 504


>gi|30021583|ref|NP_833214.1| DNA mismatch repair protein mutS [Bacillus cereus ATCC 14579]
 gi|228940550|ref|ZP_04103116.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228973467|ref|ZP_04134052.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980029|ref|ZP_04140346.1| DNA mismatch repair protein [Bacillus thuringiensis Bt407]
 gi|229128756|ref|ZP_04257734.1| DNA mismatch repair protein [Bacillus cereus BDRD-Cer4]
 gi|384187477|ref|YP_005573373.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
           chinensis CT-43]
 gi|410675796|ref|YP_006928167.1| MutS2 protein MutS [Bacillus thuringiensis Bt407]
 gi|452199848|ref|YP_007479929.1| Clostridial MutS2-related protein [Bacillus thuringiensis serovar
           thuringiensis str. IS5056]
 gi|29897138|gb|AAP10415.1| DNA mismatch repair protein mutS [Bacillus cereus ATCC 14579]
 gi|228654949|gb|EEL10809.1| DNA mismatch repair protein [Bacillus cereus BDRD-Cer4]
 gi|228779696|gb|EEM27946.1| DNA mismatch repair protein [Bacillus thuringiensis Bt407]
 gi|228786247|gb|EEM34241.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228819056|gb|EEM65115.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326941186|gb|AEA17082.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
           chinensis CT-43]
 gi|409174925|gb|AFV19230.1| MutS2 protein MutS [Bacillus thuringiensis Bt407]
 gi|452105241|gb|AGG02181.1| Clostridial MutS2-related protein [Bacillus thuringiensis serovar
           thuringiensis str. IS5056]
          Length = 633

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 265/520 (50%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I    + +   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYNIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQ------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP+  K+  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLHFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYM 507


>gi|266619519|ref|ZP_06112454.1| DNA mismatch repair protein MutS [Clostridium hathewayi DSM 13479]
 gi|288868929|gb|EFD01228.1| DNA mismatch repair protein MutS [Clostridium hathewayi DSM 13479]
          Length = 799

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 208/702 (29%), Positives = 325/702 (46%), Gaps = 99/702 (14%)

Query: 27  TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR-AVNNVWKKLTEA 85
           T A   + Q   +    ++DI   L     G  L   E+ +V   L  A         E 
Sbjct: 51  TDAVTRVRQKGGISFGGVKDIRASLKRLEVGSSLGIVELLSVSSLLTTAARAKSYGRHED 110

Query: 86  AELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN 145
           +EL  DSL+++  +LE L   N  TE+      CI  +  +  D AS  L  +R    R+
Sbjct: 111 SELPEDSLEQFFSVLEPLTPVN--TEIRR----CILSEEEVS-DDASPGLHHVR----RS 159

Query: 146 MENLDSLLKKVAAQIFQAG--GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
           M+N+   +      I  +    +   +IT R  R C+ +K+ HK  +P G+  + SS+G+
Sbjct: 160 MKNIHDKIHTQLNSILNSNRTYLQDAVITMRDGRYCLPVKSEHKSNVP-GMVHDQSSTGS 218

Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
           T F+EP   ++ NN    L   E  E   +L+ L+ ++   + E+    + +  +D  FA
Sbjct: 219 TLFIEPMAILKLNNDLRALEIQEQKEIEMVLADLSNQLVPYQDELLTDFEVLTRLDFIFA 278

Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
           +A  ++      P  + +        I+I+  +HPLL               +P K    
Sbjct: 279 KAALSRHYQASEPRFNKKG------IIHIKDGRHPLL---------------DPSKV--- 314

Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
                            VPI + +  +  ++V+TGPNTGGKT S+KT+GL +L+ +AGL+
Sbjct: 315 -----------------VPITVHLGRDFDLLVVTGPNTGGKTVSLKTVGLFTLIGQAGLH 357

Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
           +PA +   L  FD + ADIGD QS+EQ+LSTFS H++ IV IL      SL L DE+G+G
Sbjct: 358 IPAFDGSELSVFDEVFADIGDEQSIEQSLSTFSAHMTNIVQILGQADSRSLCLFDELGAG 417

Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
           TDP+EG ALA +IL +L +     + TTHY++L          ENA  EF++ETL+PTYR
Sbjct: 418 TDPTEGAALAIAILSFLHNMKCRTMATTHYSELKVFALTTPGVENACCEFNVETLQPTYR 477

Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM----EERR 559
           +L G  G SNA  I+  +G    II+ A+  +E          K E ++ L+    + R 
Sbjct: 478 LLIGVPGKSNAFAISSKLGLPDYIIEDAKTHLE---------AKDETFEDLLTHLEQNRV 528

Query: 560 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 619
            +E +     S   E+  L   +  + + LD R   +     ++ Q+ L  AK   D  +
Sbjct: 529 TIEKERIQIESYKMEVEKLKARLTQKEERLDERRDKMIRDAKEEAQRILRDAKDTADQTI 588

Query: 620 QDFENQLRDASADEINSLIKESESAIAAIVEAHRP-------DDDFSVSETNTS-----S 667
           +            +IN L   SES +   +EA R        + D S+S  N +     S
Sbjct: 589 R------------QINKL--ASESGVGKELEAERARIRGKLKEVDSSLSLKNQTKEPKQS 634

Query: 668 FTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
             P   + G+ V V S+     TV  +P     + VQ G +R
Sbjct: 635 IDPKKLKLGDGVRVLSMNLN-GTVSSLPNSKGDLYVQMGILR 675


>gi|406580064|ref|ZP_11055285.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus sp. GMD4E]
 gi|406584557|ref|ZP_11059584.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus sp. GMD2E]
 gi|406590812|ref|ZP_11065162.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus sp. GMD1E]
 gi|410936712|ref|ZP_11368575.1| MutS family DNA mismatch repair protein [Enterococcus sp. GMD5E]
 gi|404454651|gb|EKA01563.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus sp. GMD4E]
 gi|404463909|gb|EKA09484.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus sp. GMD2E]
 gi|404468826|gb|EKA13702.1| recombination and DNA strand exchange inhibitor protein
           [Enterococcus sp. GMD1E]
 gi|410734742|gb|EKQ76660.1| MutS family DNA mismatch repair protein [Enterococcus sp. GMD5E]
          Length = 786

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KHEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|228922193|ref|ZP_04085501.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837437|gb|EEM82770.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 633

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 162/576 (28%), Positives = 292/576 (50%), Gaps = 76/576 (13%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDSAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  +  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDKYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      +++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------MHLVNCKHPLLSGK------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ ++    R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMSMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLTGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
           ETL P Y+++ G +G+SNAL IA  +    +++QRA+  +E      ++  +S++ +   
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLQRARAYMENKEYALEKVNESKIRKPKF 527

Query: 555 MEERRKLESQARTAASLHAEIMD------LYREIED 584
           M+E+R+   + +    ++  I+D      +Y+EI++
Sbjct: 528 MQEKRENHYEYKIGDRVN--ILDYDDFGIIYKEIDN 561


>gi|430835419|ref|ZP_19453409.1| MutS2 protein [Enterococcus faecium E0680]
 gi|430489410|gb|ELA66024.1| MutS2 protein [Enterococcus faecium E0680]
          Length = 786

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           + D AS +L+ IR   +R+     E LD +++   A+      +   +IT R  R  + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
           K  ++ +   G+  + S+SG T F+EPK  V+ NN   RL   +IAE   I   LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256

Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
           E+    +EI +    + ++DL  A+A F + +  + P +S  +HV    +      +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVRAIVPGISEDNHVVLKQA------RHPL 310

Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
           +                       + E  V +            DI +  + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335

Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
           NTGGKT ++KTLGL  LM +AGL +PA    ++  F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395

Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
           +  VDIL  V+ +SLVL DE+G+GTDP EG ALA +IL  L  +    + TTHY +L   
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455

Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
                   NA+ EF ++TL PTYR+L G  G SNA  I+  +G D ++I  A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511


>gi|319652329|ref|ZP_08006446.1| DNA mismatch repair protein MutS domain-containing protein
           [Bacillus sp. 2_A_57_CT2]
 gi|317395990|gb|EFV76711.1| DNA mismatch repair protein MutS domain-containing protein
           [Bacillus sp. 2_A_57_CT2]
          Length = 650

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 164/555 (29%), Positives = 272/555 (49%), Gaps = 60/555 (10%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+TS A  ++ ++  L L+ I +I   +     G +L+PSE+ AV   LR    + KK 
Sbjct: 63  LNETSEARRLLDAEKHLPLTGISNITSHIEKLEKGIILTPSELNAVSDFLRGCRKI-KKF 121

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
               E     L  Y+  +   +N      +EE+I + I   +  +   AS++L+ IR   
Sbjct: 122 MADKEFFAPVLYTYALSMTEFRN------IEEEILYAIKGNM--VDSGASKELKRIRNHI 173

Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
            +    ++  L K          I +  I+K+  R  + IKAS K  +  G  +  SS G
Sbjct: 174 AKTEGKIEERLNKFLRSGANKEYIQEFYISKKDDRFTIPIKASFKNQVA-GTVIQTSSKG 232

Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
           +T F+EP    + N     L + E  EE  IL+ L+  I +S  EI+  ++ + + D+ F
Sbjct: 233 STVFIEPDAVSKLNVELAMLKSEESVEEYQILATLSGAILESIHEIRINIECISQYDMIF 292

Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
           A+A +++  D + P +++  ++   SS      KHPLL G+                   
Sbjct: 293 AKAKYSKSTDAIEPEINNHGYIKLVSS------KHPLLEGT------------------- 327

Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
                             VP+D ++  + R +VITGPN GGKT  +KT+G+ +L   +G 
Sbjct: 328 -----------------IVPLDFEIGKDYRSLVITGPNAGGKTVVLKTIGILTLAVMSGF 370

Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
           ++ AK    +  FD +  DIGD+QS+E  LSTFS H+  I +++   +  +L+L DEIGS
Sbjct: 371 HIMAKPGSEIAIFDHVFVDIGDNQSIENALSTFSSHMKNISEVMSASTNNTLLLFDEIGS 430

Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
           GT+P+EG ALA +IL+       + V TTHY ++    +    F NAA  F    L+P Y
Sbjct: 431 GTEPNEGAALAIAILEEFYHMGCITVATTHYGEIKRYSEMHDDFMNAAMLFDSAELKPMY 490

Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 562
           ++L G +G+SNAL I++ +     +++RAQ  +E      +  R++ + + ++E  + +E
Sbjct: 491 KLLIGESGESNALWISRKMNIREHVLKRAQMYIENKDYNLEAVRENRIKKPVIEVTQNIE 550

Query: 563 SQARTAASLHAEIMD 577
                    H EI D
Sbjct: 551 -------EYHYEIGD 558


>gi|326693335|ref|ZP_08230340.1| DNA mismatch repair protein MutS2 [Leuconostoc argentinum KCTC
           3773]
          Length = 801

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 179/566 (31%), Positives = 276/566 (48%), Gaps = 65/566 (11%)

Query: 51  LNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLT 110
           +N+++S   LS  E+  V R   A+ + ++++  A E  GDSLQ    L E   N   L 
Sbjct: 80  INASLSATELS--ELSTVLRNTNAIAHFFEQM--ADEAIGDSLQ---VLPEQAANLATLP 132

Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG----I 166
            L ++I   ID    I  D AS DL+ IR +   N + +     K   Q +  G     +
Sbjct: 133 TLTQQIEIAIDATGRIN-DEASFDLKAIRGKITGNEQAV-----KTKMQGYTRGKTAQYL 186

Query: 167 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 226
             P++T R  R  + +KA ++     G+  + S +G T ++EP+  VE NN    L   E
Sbjct: 187 SDPIVTIRADRYVLPVKAEYRSQF-GGVVHDQSQTGQTLYIEPQAVVELNNKLSELRVKE 245

Query: 227 IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
            AEE  +L  L+A +A    EI   +  +   D   A+A  A  +D + P++  ++HV+ 
Sbjct: 246 QAEEQRVLQELSAALAPYTEEIARNVAILGHFDFVNAKARLAARLDAMQPVVDPENHVAL 305

Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
             +       HPLL                                 K ++   V  DI 
Sbjct: 306 QQAW------HPLL--------------------------------DKNVA---VANDII 324

Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
           +  + + ++ITGPNTGGKT ++KTLGL  LM+++GL++  K    +  F  + ADIGD Q
Sbjct: 325 LGEDYKAIIITGPNTGGKTITIKTLGLLQLMAQSGLFITTKRPSTVGVFHEVFADIGDEQ 384

Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
           S+EQ+LSTFS H++ IV +L+ +  ++LV+ DE+G+GTDP+EG ALA +IL  +      
Sbjct: 385 SIEQSLSTFSSHMANIVSMLDQIDDKTLVIFDELGAGTDPAEGAALAIAILDKVASLGAY 444

Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
            + TTHY +L           NA+  F +ETL+PTY+ L G  G SNAL IAK +GF   
Sbjct: 445 VIATTHYPELKLYGYNRPETLNASMVFDVETLKPTYQFLMGVPGQSNALAIAKRLGFGDD 504

Query: 527 IIQRAQKLVERLRPERQQH------RKSELYQSLMEERRKLESQARTAASLHAEIMDLYR 580
           +I  A  L +    +  Q       ++  + Q   E   +L+S A  A +L A+   L R
Sbjct: 505 VIGAATALTDESDQDLNQMIADLVAQREAVKQHDAELTMQLKSTAEQAEALAAKEAQLER 564

Query: 581 EIEDEAKDLDRRAAHLKAKETQQVQQ 606
           +      D    A H+ A   +Q +Q
Sbjct: 565 DRARIVLDAKNEANHIVAATKKQAEQ 590


>gi|218898540|ref|YP_002446951.1| DNA mismatch repair protein MutS [Bacillus cereus G9842]
 gi|218543674|gb|ACK96068.1| DNA mismatch repair protein MutS [Bacillus cereus G9842]
          Length = 572

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 159/528 (30%), Positives = 269/528 (50%), Gaps = 67/528 (12%)

Query: 16  SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           SL+  +  LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR 
Sbjct: 39  SLKVVRNRLNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRG 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
              + K + +         + ++P+L    N   +TE   +EE+I F I    + +   A
Sbjct: 99  CRKIKKFMLDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AA 146

Query: 132 SEDLELIRAERKRNMENLDSLLK----KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
           S++L+ IR     N++++D  +K    K    I     I +  I+K+  R  + IK+S+K
Sbjct: 147 SKELKRIR----NNIDSVDGKIKERLMKFLNSIANKKFIQEFFISKKDDRYTIPIKSSYK 202

Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
             +   I +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   
Sbjct: 203 NQVAGSI-IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYS 261

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           IK  M+ + + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G     
Sbjct: 262 IKINMELISQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV--- 312

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                                            VP+  K+  E R ++ITGPN GGKT  
Sbjct: 313 ---------------------------------VPLHFKIGQEYRSLIITGPNAGGKTIV 339

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL +L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ 
Sbjct: 340 LKTIGLLTLATMSGLHIAGDRGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMR 399

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
           + +  +L+L DEIGSGT+P+EG ALA SIL+ L     + V +THY ++    +    F 
Sbjct: 400 MSNNNTLLLFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFM 459

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           NAA +F+ ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 460 NAAMQFNSETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYM 507


>gi|191637667|ref|YP_001986833.1| DNA mismatch repair protein [Lactobacillus casei BL23]
 gi|385819398|ref|YP_005855785.1| DNA mismatch repair protein, MutSB [Lactobacillus casei LC2W]
 gi|385822563|ref|YP_005858905.1| DNA mismatch repair protein, MutSB [Lactobacillus casei BD-II]
 gi|409996521|ref|YP_006750922.1| MutS2 protein [Lactobacillus casei W56]
 gi|238693020|sp|B3WC74.1|MUTS2_LACCB RecName: Full=MutS2 protein
 gi|190711969|emb|CAQ65975.1| DNA mismatch repair protein [Lactobacillus casei BL23]
 gi|327381725|gb|AEA53201.1| DNA mismatch repair protein, MutSB [Lactobacillus casei LC2W]
 gi|327384890|gb|AEA56364.1| DNA mismatch repair protein, MutSB [Lactobacillus casei BD-II]
 gi|406357533|emb|CCK21803.1| MutS2 protein [Lactobacillus casei W56]
          Length = 786

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 213/744 (28%), Positives = 352/744 (47%), Gaps = 92/744 (12%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G  +VQ  Q P    +   Q L      A A+     + +  +E+I   L     G +L+
Sbjct: 27  GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
             E+ ++ R L+ V+ + K LT+   ++D      +  L  L ++   L +L  ++   +
Sbjct: 86  GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
           D    +  D AS  L  +R       E + S+  K+  ++       Q+  +  P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGKIRGKMTNYTRGAQSKYLSDPIVTIR 191

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R  + +KA ++     G+  + S++G T F+EP+  V  NN       +E+AE   IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQVIVALNNRLREAQLAEVAEINRIL 250

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
           + L+ E+A    +IK     +   D   A+A  A+      P+      VS D+ + +  
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
            +HPL+               +P K         VG+            DI +  + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
           VITGPNTGGKT ++KTLGL  LM ++GL++PA +  R+  FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389

Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
           FS H+  IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL  + +     V TTHY 
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449

Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
           +L        +  NA+ EF  +TL+PTYR+L G  G SNA +I+  +G    I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPSVIVERAKSM 509

Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
           +         H  + +   L ++R+  E+       Q   A S+H E+   Y++   E +
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-R 563

Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIA 646
           D   + A  KA         ++ A+ + D +++   + QL +    + N LI    +A  
Sbjct: 564 DAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613

Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
           A+ + H+  P     +            G++V V S  D+  T++E   D     VQ G 
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671

Query: 705 MRVRVKKNNIRPIPNSKRKNAANP 728
           ++++V  + +  I  SK+  A  P
Sbjct: 672 LKMKVPTDEMEKIKPSKQSAAQRP 695


>gi|423641508|ref|ZP_17617126.1| MutS2 family protein [Bacillus cereus VD166]
 gi|401278306|gb|EJR84241.1| MutS2 family protein [Bacillus cereus VD166]
          Length = 633

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 265/520 (50%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I    + +   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYNIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQ------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP+  K+  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLHFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     +++RA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYM 507


>gi|440781736|ref|ZP_20959964.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium pasteurianum DSM 525]
 gi|440220454|gb|ELP59661.1| recombination and DNA strand exchange inhibitor protein
           [Clostridium pasteurianum DSM 525]
          Length = 788

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 174/546 (31%), Positives = 281/546 (51%), Gaps = 59/546 (10%)

Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
           + T R  R  + +KA +K  +P G+  + SSSGAT F+EP G V  NN    +   E AE
Sbjct: 186 IYTIRGDRYVIPVKAEYKAQVP-GLVHDQSSSGATLFIEPIGLVNLNNEIKEIMLKEQAE 244

Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
            + IL  L+ ++ ++   ++     V E+D  FA+A +A  ++ + P       V+ +  
Sbjct: 245 ISRILEELSQKVYENIVLVENNASIVYELDFIFAKAKYASRINAINP------AVNDNGI 298

Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
           I+I   +HPL+               NP K                     V +D+ +  
Sbjct: 299 IDIVQGRHPLI---------------NPEKV--------------------VAMDVYLGR 323

Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
           +   +V+TGPNTGGKT ++KT+GL  LM+ +G+ +PA+ +  + +F  + ADIGD QS+E
Sbjct: 324 DFTSLVVTGPNTGGKTVTLKTVGLLELMAMSGILIPARENSTVSFFKEVFADIGDEQSIE 383

Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
           Q+LSTFS H++ IV+I+      SLVL DE+G+GTDP+EG ALA +IL+ LR+R      
Sbjct: 384 QSLSTFSSHMTNIVNIMGKADSNSLVLFDELGAGTDPTEGAALAVAILENLRERNTKLAA 443

Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
           TTHY++L     K    ENA+ EF +ETL+PTYR+L G  G SNA  I+K +G    II 
Sbjct: 444 TTHYSELKAYALKTEGVENASVEFDVETLKPTYRLLIGIPGKSNAFEISKRLGLPDYIID 503

Query: 530 RAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
            A+K +  + L+ E       +L Q+L E+  K E  AR +  L  E   +  + E++  
Sbjct: 504 EARKGISSDTLKFE-------DLIQTLQEKSIKAEENARRSEMLKNEAEKIKEKYEEKLY 556

Query: 588 DLD---RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 644
            L+    +A +   +E + +  E   AK + D ++++     R   +    + ++E    
Sbjct: 557 SLNSSREKALNEGRREAKNIIAE---AKEEADRILKNIRELERMGYSSGTRAKLEEERKK 613

Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
           +   +E +  +     S+ +      + GE+V++ SL  K   V+  P     V +Q G 
Sbjct: 614 LKENLE-NAEESALKNSQNHKGLNRVKEGEEVYIPSLNMK-GIVLSQPDSKGEVQIQAGI 671

Query: 705 MRVRVK 710
           M++ VK
Sbjct: 672 MKINVK 677


>gi|229005742|ref|ZP_04163441.1| DNA mismatch repair protein [Bacillus mycoides Rock1-4]
 gi|228755527|gb|EEM04873.1| DNA mismatch repair protein [Bacillus mycoides Rock1-4]
          Length = 630

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 167/568 (29%), Positives = 279/568 (49%), Gaps = 66/568 (11%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +I   +     G +L P+E+ +V   LR    V KK 
Sbjct: 44  LNETTEARAILDAEGHVPFFGISNIDSTIQKLEKGMILDPTELVSVSDFLRGCRKV-KKF 102

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
               E     L  Y+  +   K+      +EE+I F I      I   AS++L+ IR   
Sbjct: 103 MLDKEFFAPVLASYANSMSEFKS------VEEEINFSIKGNS--IDSAASKELKRIR--- 151

Query: 143 KRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
             N+++++  +K+  ++   +      I +  I+K+  R  + +KAS+K  +  G  + V
Sbjct: 152 -NNIDSVEGKIKERLSKFLNSSANKKYIQEFFISKKDDRYTIPVKASYKNQVA-GTIVEV 209

Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
           SS G+T F+EP    + N     L   E  EE  IL+ L+  I +    IK  M+ + + 
Sbjct: 210 SSKGSTVFIEPNTVTKLNVELASLKAEEAMEEYQILATLSGMILEDIYNIKINMELISQY 269

Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
           D+ FA+A F++ + G+ P L+   +V       +   KHPLL G                
Sbjct: 270 DMVFAKAKFSKHIGGIEPKLNDYGYVK------LVHCKHPLLAGEV-------------- 309

Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
                                 VP+  ++    R ++ITGPN GGKT  +KT+GL +L +
Sbjct: 310 ----------------------VPLHFEIGPNYRSLIITGPNAGGKTIVLKTIGLLTLAT 347

Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
            +GL++       +  F+ I  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+L D
Sbjct: 348 MSGLHIAGDKETEIAVFENIFVDIGDNQSIENALSTFSSHMKNLSEIMRVSNNNTLLLFD 407

Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
           EIGSGT+P+EG ALA SIL+         V TTHY ++    +  + F NAA +F+ ETL
Sbjct: 408 EIGSGTEPNEGAALAISILEEFYHMGCTTVATTHYGEIKRFSEMHSDFMNAAMQFNSETL 467

Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE--RLRPERQQH---RKSELYQS 553
            P Y+++ G +G+SNAL I++ +     ++QRA+  +E    R ER      RK ++ + 
Sbjct: 468 EPMYKLMIGKSGESNALWISRKMNVRENVLQRAKGYMENKEYRLERVNESRLRKPKIVKE 527

Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
             EE+ + +   R     + +   +Y+E
Sbjct: 528 KAEEKDEYKKGDRVKLLDYDDFGIVYKE 555


>gi|403237025|ref|ZP_10915611.1| MutS family DNA mismatch repair protein [Bacillus sp. 10403023]
          Length = 646

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 163/546 (29%), Positives = 276/546 (50%), Gaps = 68/546 (12%)

Query: 15  KSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
           K +E S   + +    LA+  S P+   +++ I   ++ A  G  L   +   +   L  
Sbjct: 41  KKIEHSLHEITEAMNILAISGSIPI--HSLDQIGQYIDQAKKGMALKVDQFTRIVSFLDH 98

Query: 75  VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
              + K+  +  E  G ++  Y+       +   ++ELE +I  C+      + D AS D
Sbjct: 99  CQKL-KQFMKDKEYAGPTVSLYAA------SIGDVSELETEISRCLRNGH--VDDYASSD 149

Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGIKASHKYLL 190
           L  +R    R++      LK+ A  + ++G I   L    I++R  R  + +K  ++  +
Sbjct: 150 LNYLR----RHLATGQEKLKEKAQSLVRSGRIAPYLQDTNISERSGRYVLAVKKEYRKKI 205

Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA---ILSLLTAEIAKSERE 247
             G  L+ S+SG+T F+EP   VE + ++  +   +IAEET    IL  LT      E+ 
Sbjct: 206 -QGTVLDTSASGSTLFIEP---VELSTLQEEIELIKIAEETEVERILYELTQLFLSHEQV 261

Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
           I+  ++ +   D+ FA+A +++ +    P ++ +        I+++  +HP+L  ++   
Sbjct: 262 IQIAVETMHHYDVLFAKANYSRKIHATIPTINEEFQ------IHLKEARHPMLGNNA--- 312

Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
                                            +P+ I +  + R +VITGPNTGGKT +
Sbjct: 313 ---------------------------------IPLTIPIGDKERALVITGPNTGGKTVT 339

Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
           +KT+GL +LM+++GL +PAK    +  F  I  DIGD QS+EQNLSTFS  +  I++IL+
Sbjct: 340 LKTVGLLTLMAQSGLPIPAKKGSEIAIFQHIFVDIGDGQSIEQNLSTFSSRMVNIIEILQ 399

Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
           + +  SLVLIDE+GSGTDP EG+ALA  IL+ L ++      TTHY+++    D+   F 
Sbjct: 400 MTNDSSLVLIDELGSGTDPREGMALAIVILEQLYEKGATLFATTHYSEMKKFADETEGFL 459

Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
           N + EF ++TL+PTYR+L G +G S A +IA  +G    +++RA +   +   +  Q+  
Sbjct: 460 NGSMEFDIQTLQPTYRLLLGKSGQSQAFDIAAKLGMHPTLLERAHQKAYQEEKDYHQNIT 519

Query: 548 SELYQS 553
            E  QS
Sbjct: 520 QETLQS 525


>gi|313124256|ref|YP_004034515.1| muts family ATPase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280819|gb|ADQ61538.1| MutS family ATPase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 787

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 197/615 (32%), Positives = 301/615 (48%), Gaps = 83/615 (13%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           +LD AS DL  +R  R   +     + +K+ A      G  +   ++T R  R  + +K 
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMTAYTKGKNGEYLSDQIVTIRDDRYVIPVKQ 204

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            ++Y    G+  + S+SG T F+EP   +  NN   RL N  +AEE   +  +  E++  
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259

Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
            RE    IK +   + E+D   A+A  A+ M    P LS+      D S  + G +HPL+
Sbjct: 260 AREEMEAIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313

Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
                          +P                    D  V  DI +  +   ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338

Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
           TGGKT ++KT GL  LM+++GL++PA     +  FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398

Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
            IV I++ VS +SLVLIDEIG+GTDP EG  LA SIL + R +    +VTTHY +L    
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGACLAISILDFFRKKGAKIIVTTHYPELKLYG 458

Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
               R  NA+ EF ++TL PTYR+  G  G SNA  IA+ +G    ++  A+KL+     
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVAGAEKLMSSDDS 518

Query: 541 ERQQHRKSELYQS---LMEERRKLESQARTAASLHAEI---MDLYREIEDEAKD--LDR- 591
           +   H   EL +    + E ++KL++    A  L  ++   +D+Y +   +  D  LDR 
Sbjct: 519 DI-NHMIDELNKQTKLVTENKQKLQTSLDRAKQLEKKLQDALDIYNQRVQKQLDFALDRA 577

Query: 592 -RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 650
                 K K+  ++  EL  A+ +    +Q   NQL DA   E N L K+ E+ +A    
Sbjct: 578 NEIVAKKRKKADKIIAELEEARKE---GMQAKTNQLMDAKG-EFNQLAKQ-EANLAK--- 629

Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
                    V +        Q G++V V S G +  TV +  G+ D   V  G+++++V 
Sbjct: 630 -------NKVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHDYE-VSLGRIKLKVT 680

Query: 711 KNNIRPIPNSKRKNA 725
             +I  +   +++ A
Sbjct: 681 DRDIDKLAAGQKQQA 695


>gi|256846546|ref|ZP_05552003.1| DNA mismatch repair protein MutS [Fusobacterium sp. 3_1_36A2]
 gi|256718315|gb|EEU31871.1| DNA mismatch repair protein MutS [Fusobacterium sp. 3_1_36A2]
          Length = 778

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 191/697 (27%), Positives = 332/697 (47%), Gaps = 121/697 (17%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L   E+  +   LR V     +L        D L +Y  L E + N   L  +E+ I
Sbjct: 82  GTYLEVEELWDINVNLRTVRIFKSRL--------DELGKYKQLRETIGNIPNLRVIEDVI 133

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
              I+ +  I  D AS DL  IR  ++     L+  +K+   ++F+    +    + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKR----TLNMNIKRKFEELFEEPSLSNAFQERIIT 188

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
           +R  RM   +K   K L+  GI  + SSSG T F+EP   V  NN    L   E  E   
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247

Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
           IL  +T  +  ++ +I  + ++V+ +D+  A++ +A   D  C I +    VS    +++
Sbjct: 248 ILLRITELLRNNKDDILTIGEKVMYLDILNAKSIYAN--DNKCEIPT----VSNREILSL 301

Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
           E  +HP +                                     D  VP+  ++  +  
Sbjct: 302 EKARHPFI-----------------------------------DKDKVVPLTFEIGKDYD 326

Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
           +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + ++ +F+ + ADIGD QS+EQ+L
Sbjct: 327 ILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQSL 386

Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
           S+FS H+  + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++   + +TTH
Sbjct: 387 SSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITTH 446

Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA- 531
           Y+ +      +   E A+ EF+ +TL PTYR+L G  G+SNAL IA+ +G    II +A 
Sbjct: 447 YSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKAR 506

Query: 532 ----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE-----I 575
                     +K++E ++ + Q+     E +  L EE R    +A+    +  +     I
Sbjct: 507 AYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEARIDRERAKQETLIIEKQKNEII 566

Query: 576 MDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFENQL 626
              Y E E    ++  +A+ L  K         + +Q+Q+ LN                 
Sbjct: 567 KSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM---------------- 610

Query: 627 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 686
                  +++ ++E ++    +V+  +   +F V            G++V VKS+ ++ A
Sbjct: 611 -------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQFA 650

Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
            ++++    ++  VQ G +++ V  + I+ +   K K
Sbjct: 651 NILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEK 687


>gi|423453203|ref|ZP_17430056.1| MutS2 family protein [Bacillus cereus BAG5X1-1]
 gi|401138883|gb|EJQ46448.1| MutS2 family protein [Bacillus cereus BAG5X1-1]
          Length = 633

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 265/520 (50%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P+E+ +V   LR    + K +
Sbjct: 47  LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+++K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSTYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N         E  EE  IL+ L+  I ++   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASWKAEEAMEEYQILATLSGMILENIYHIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   H      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGH------IHLVNCKHPLLTGQV----------- 312

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ ++  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + + +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLTGCITIASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     ++QRA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYM 507


>gi|306490800|gb|ADM94921.1| mismatch repair ATPase [uncultured candidate division JS1
           bacterium]
          Length = 790

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 190/635 (29%), Positives = 305/635 (48%), Gaps = 102/635 (16%)

Query: 112 LEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGID 167
           LE+ I   I+ +L I+ D AS  L+ IR +     ++  E L++++K    ++     I 
Sbjct: 132 LEKTIKDSINEELQIV-DDASPLLKKIRQKIHSIERKIKEKLENIIKDPQNRLI----IQ 186

Query: 168 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
             +IT R+ R  + +K   K   P G+  + S SG T FMEP   VEFNN    L   E 
Sbjct: 187 DDIITIRQGRYVIPVKQQEKGKFP-GVIHDKSESGVTVFMEPLPVVEFNNELRELYQDEK 245

Query: 228 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
            EE  IL  LTA + ++  EI Y    + E+D   A+A  +  M  V P ++ Q      
Sbjct: 246 QEEYRILQKLTALVGQNGEEILYSYQILGELDFINAKAKLSIKMKAVEPQINEQG----- 300

Query: 288 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 347
             I++   +HPLL                  K+ V                  VPIDI++
Sbjct: 301 -IIHLYKARHPLL------------------KNKV------------------VPIDIEL 323

Query: 348 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 407
             +  +++ITGPNTGGKT ++KT+GL +LM+++GL++P +    +  F  I ADIGD QS
Sbjct: 324 GEKFEILIITGPNTGGKTVTLKTVGLLTLMAQSGLHIPVEVDSEVAIFKKIFADIGDEQS 383

Query: 408 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
           +EQ+LSTFS HI  I+ ILE   + SLVL+DE+G+GTDPSEG ALA +IL  L+ +    
Sbjct: 384 MEQSLSTFSAHIQNIIHILEEADQYSLVLLDELGAGTDPSEGSALAMAILDLLKSKGAKV 443

Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
           + TTH+  L           NA  EF  +TL+PTY+I  G  G S A  +A+ +G    +
Sbjct: 444 LSTTHHDSLKAYAYLTEGVMNAKVEFDEKTLKPTYKISIGLPGKSCAFAVAQRLGLPEMV 503

Query: 528 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQAR--------TAASLH------A 573
           + +A+                   Q L++E+  LE+  R         AASL        
Sbjct: 504 LDKAE-------------------QYLVKEKLDLENLIRKMEKDKDQVAASLQYIKREKG 544

Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA-- 631
           +I  L +E+E++   L      +K +  Q+ ++ L+ A+ +   +++  + +  D  A  
Sbjct: 545 QISQLKKELEEKIGALQEEEKKIKLEAYQEAEKILSLAQTRAKEMIKSLKRKKYDGEAFV 604

Query: 632 DEINSL--IKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
            EI +L  +KE     A      +  + F            + G++V + SLG +  T++
Sbjct: 605 QEIKALEDVKEDIKKEATKYTLRQAVNHF------------EKGDRVFINSLG-REGTIL 651

Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
           E         +Q   +R+++  ++++ +P     N
Sbjct: 652 EKNEKKKQYTIQVANLRLKIPVSDLKQVPQGDFSN 686


>gi|418036209|ref|ZP_12674639.1| hypothetical protein LDBUL1519_01339 [Lactobacillus delbrueckii
           subsp. bulgaricus CNCM I-1519]
 gi|354688558|gb|EHE88595.1| hypothetical protein LDBUL1519_01339 [Lactobacillus delbrueckii
           subsp. bulgaricus CNCM I-1519]
          Length = 787

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 195/627 (31%), Positives = 301/627 (48%), Gaps = 107/627 (17%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           +LD AS DL  +R  R   +     + +K+ A      G  + + ++T R  R  + +K 
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMIAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            ++Y    G+  + S+SG T F+EP   +  NN   RL N  +AEE   +  +  E++  
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259

Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
            RE    IK +   + E+D   A+A  A+ M    P LS+      D S  + G +HPL+
Sbjct: 260 AREEMETIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313

Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
                          +P                    D  V  DI +  +   ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338

Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
           TGGKT ++KT GL  LM+++GL++PA     +  FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLHLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398

Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
            IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R +    +VTTHY +L    
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 458

Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
               R  NA+ EF ++TL PTYR+  G  G SNA  IA+ +G    ++  A+KL+     
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 518

Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
           +   H   EL +   + +   E++ +   SL            D AK L+++        
Sbjct: 519 DI-NHMIDELNK---QTKLATENKQKQQTSL------------DRAKQLEKKLQDALDIY 562

Query: 601 TQQVQQELNFA-----------KVQIDTVVQDFE-----------NQLRDASADEINSLI 638
            Q+VQ++L+FA           + + D ++ + E           NQL DA   E N L 
Sbjct: 563 NQRVQKQLDFALDRANEIVAKKRKKADKIIAELEEARKEGMQVKTNQLMDAKG-EFNQLA 621

Query: 639 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 698
           K+ E+ +A             V +        Q G++V V S G +  TV +  G+ D  
Sbjct: 622 KQ-EANLAK----------NKVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHD-Y 668

Query: 699 LVQYGKMRVRVKKNNIRPIPNSKRKNA 725
            V  G+++++V   +I  +   +++ A
Sbjct: 669 EVSLGRIKLKVTDRDIDKLAAGQKQQA 695


>gi|237741375|ref|ZP_04571856.1| DNA mismatch repair protein mutS [Fusobacterium sp. 4_1_13]
 gi|229430907|gb|EEO41119.1| DNA mismatch repair protein mutS [Fusobacterium sp. 4_1_13]
          Length = 778

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 191/698 (27%), Positives = 334/698 (47%), Gaps = 123/698 (17%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L   E+  +   LR V     +L        D L +Y  L E + N   L  +E+ I
Sbjct: 82  GTYLEVEELWDINVNLRIVRIFKSRL--------DELGKYKQLRETIGNIPNLRVIEDVI 133

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
              I+ +  I  D AS DL  IR  +K     L+  +K+   ++F+    +    + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQEKIIT 188

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
           +R  RM   +K   K L+  GI  + SSSG T F+EP   V  NN    L   E  E   
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247

Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
           IL L  AE+ ++ ++ I  + ++V+ +D+  A++ +A       PI++++  +S + +  
Sbjct: 248 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENKCEIPIVNNKEILSLEKA-- 304

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
               +HP +                                     D  VP+  ++  + 
Sbjct: 305 ----RHPFI-----------------------------------DKDKVVPLTFEIGKDY 325

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
            +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385

Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           LS+FS H+  + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++   + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY+ +      +   E A+ EF+ +TL PTYR+L G  G+SNAL IA+ +G    II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505

Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
                      +K++E ++ + Q+     E +  L EE R    +A+    +  +     
Sbjct: 506 RAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEARIDRERAKQETLIIEKQKNEI 565

Query: 575 IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFENQ 625
           I   Y E E    ++  +A+ L  K         + +Q+Q+ LN                
Sbjct: 566 IKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM--------------- 610

Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 685
                   +++ ++E ++    +V+  +   +F V            G++V VKS+ ++ 
Sbjct: 611 --------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQF 649

Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           A ++++    ++  VQ G +++ V  + I+ +   K K
Sbjct: 650 ANILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEK 687


>gi|385840651|ref|YP_005863975.1| MutS2 protein [Lactobacillus salivarius CECT 5713]
 gi|300214772|gb|ADJ79188.1| MutS2 protein [Lactobacillus salivarius CECT 5713]
          Length = 786

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 197/638 (30%), Positives = 303/638 (47%), Gaps = 89/638 (13%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
           DI G LNS          E+ A+ R LRA N V +   + A    D+      L + +  
Sbjct: 79  DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIELEVLFDDVAK 125

Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG 165
              L E+ +K+   I+    +  D AS  L+ IR +     E +   L         +  
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNAYTRGT-NSKY 183

Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
           +   ++T R  R  + +K  ++     GI  + SSSG T F+EP   VE NN   RL   
Sbjct: 184 LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQ 239

Query: 226 EIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
           ++AE      IL  L+ E+A    E+      +  +D   A+A +A  +    PILS ++
Sbjct: 240 QVAEREEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKATEPILSKEN 299

Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
            V       +  + HPLL                 +K  V+N                  
Sbjct: 300 DVY------LRQVWHPLL----------------GMKKAVKN------------------ 319

Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
            DI +  + + +VITGPNTGGKT ++KTLGL  LM ++GLY+PA    R+  FD I ADI
Sbjct: 320 -DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADI 378

Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
           GD QS+EQ+LSTFS H++ IV+IL+ +  +SLVL DE+G+GTDP EG ALA SIL  +  
Sbjct: 379 GDEQSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGA 438

Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
           +    V TTHY +L     +     NA+ EF   TL+PTYR+L G  G SNA +I++ +G
Sbjct: 439 KGSYVVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLG 498

Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASLHAEI 575
            D+ I+  A++L       +     +E+   L+ +R   E +        R A  LH ++
Sbjct: 499 LDKMIVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHDL 553

Query: 576 MDLYREIEDEAKDLDRRA---AHLKAKETQQVQQEL--NFAKVQIDTVVQDFENQLRDAS 630
              + + E + +++  +A   A+   +ET++   EL     K+++       E  L DA 
Sbjct: 554 ETNFHQFERQKENMLEQAKERANQIVEETKKKSDELISELRKMKMSAASNIEEGSLIDAQ 613

Query: 631 ADEINSLIKESESAIAAIV-------EAHRPDDDFSVS 661
              +N+L +E+      ++       E H P+DD  V+
Sbjct: 614 G-RVNALHQETNLKKNKVLRKAKQQQELH-PNDDVMVN 649


>gi|126699762|ref|YP_001088659.1| DNA mismatch repair protein [Clostridium difficile 630]
 gi|115251199|emb|CAJ69030.1| DNA mismatch repair protein [Clostridium difficile 630]
          Length = 636

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 249/520 (47%), Gaps = 62/520 (11%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           +KL     A   +  S  + L  + +    ++    G ++ P E+  +   LR    +  
Sbjct: 45  RKLAENKEARKIIENSNHIPLEGLFNAGSTIDKIEKGMIIEPVELVNIEDFLRGCRKMKA 104

Query: 81  KLTEAAELDGDSLQRYSPLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
            + E         + YSP L     N      +E++I +CI      +   AS++L+ IR
Sbjct: 105 FMLEK--------EFYSPTLSSYALNITECKSIEDEINYCIKSNK--VDSNASKELKKIR 154

Query: 140 AERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
               RN+E     +   L K          I + +I+KR  R  + IK+S+K  + +G  
Sbjct: 155 ----RNIEITEGKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEV-NGTI 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           L+ SS G T F+EP      +     L   E  EE  ILS LT  I +   +IK  ++ +
Sbjct: 210 LDTSSKGNTVFIEPISVSNLSTELTMLKADETIEEYKILSYLTELIFEKISQIKLNIEIL 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            E D+ FA+A ++Q + G+ P +++  ++       I+G KHPLL G +           
Sbjct: 270 SEYDMVFAKAKYSQKIKGITPKINNNGYIKI-----IKG-KHPLLTGDA----------- 312

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP+D ++    R ++ITGPN GGKT ++KT+GL +
Sbjct: 313 -------------------------VPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM + G  + AK       F+ +  DIGD+QS+E  LSTFS HI  I +I+ L +  +LV
Sbjct: 348 LMVQCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMSLSNNSTLV 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG  LA S+L+       + + +THY ++         FENA   F  
Sbjct: 408 LFDEIGSGTEPNEGAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDK 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y++  G + DSNAL I+K +G   +++ RA++ V
Sbjct: 468 ETLEPLYKLTIGKSEDSNALFISKKMGIKNRVLDRAKEYV 507


>gi|228992175|ref|ZP_04152109.1| DNA mismatch repair protein [Bacillus pseudomycoides DSM 12442]
 gi|228767538|gb|EEM16167.1| DNA mismatch repair protein [Bacillus pseudomycoides DSM 12442]
          Length = 630

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 167/568 (29%), Positives = 279/568 (49%), Gaps = 66/568 (11%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +I   +     G +L P+E+ +V   LR    V KK 
Sbjct: 44  LNETTEARAILDAEGHVPFFGISNIDSTIQKLEKGMILDPTELVSVSDFLRGCRKV-KKF 102

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
               E     L  Y+  +   K+      +EE+I F I      I   AS++L+ IR   
Sbjct: 103 MLDKEFFAPVLASYANSMSEFKS------VEEEINFSIKGNS--IDSAASKELKRIR--- 151

Query: 143 KRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
             N+++++  +K+  ++   +      I +  I+K+  R  + +KAS+K  +  G  + V
Sbjct: 152 -NNIDSVEGKIKERLSKFLNSSANKKYIQEFFISKKDDRYTIPVKASYKNQVA-GTIVEV 209

Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
           SS G+T F+EP    + N     L   E  EE  IL+ L+  I +    IK  M+ + + 
Sbjct: 210 SSKGSTVFIEPNTVTKLNVELASLKAEEAMEEYQILATLSGMILEDIYNIKINMELISQY 269

Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
           D+ FA+A F++ + G+ P L+   +V       +   KHPLL G                
Sbjct: 270 DMVFAKAKFSKHIGGIEPKLNDYGYVK------LVHCKHPLLAGEV-------------- 309

Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
                                 VP+  ++    R ++ITGPN GGKT  +KT+GL +L +
Sbjct: 310 ----------------------VPLHFEIGPNYRSLIITGPNAGGKTIVLKTIGLLTLAT 347

Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
            +GL++       +  F+ I  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+L D
Sbjct: 348 MSGLHIAGDKETEIAVFENIFVDIGDNQSIENALSTFSSHMKNLSEIMRVSNNNTLLLFD 407

Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
           EIGSGT+P+EG ALA SIL+         V TTHY ++    +  + F NAA +F+ ETL
Sbjct: 408 EIGSGTEPNEGAALAISILEEFYHMGCTTVATTHYGEIKRFSEMHSDFMNAAMQFNSETL 467

Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE--RLRPERQQH---RKSELYQS 553
            P Y+++ G +G+SNAL I++ +     ++QRA+  +E    R ER      RK ++ + 
Sbjct: 468 EPMYKLMIGKSGESNALWISRKMNVRENVLQRAKGYMENKEYRLERVNESRLRKPKIVKE 527

Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
             EE+ + +   R     + +   +Y+E
Sbjct: 528 KAEEKDEYKKGDRVKLLDYDDFGIVYKE 555


>gi|254975741|ref|ZP_05272213.1| DNA mismatch repair protein [Clostridium difficile QCD-66c26]
 gi|255093128|ref|ZP_05322606.1| DNA mismatch repair protein [Clostridium difficile CIP 107932]
 gi|255314870|ref|ZP_05356453.1| DNA mismatch repair protein [Clostridium difficile QCD-76w55]
 gi|255517544|ref|ZP_05385220.1| DNA mismatch repair protein [Clostridium difficile QCD-97b34]
 gi|255650655|ref|ZP_05397557.1| DNA mismatch repair protein [Clostridium difficile QCD-37x79]
 gi|260683745|ref|YP_003215030.1| DNA mismatch repair protein [Clostridium difficile CD196]
 gi|260687405|ref|YP_003218539.1| DNA mismatch repair protein [Clostridium difficile R20291]
 gi|306520583|ref|ZP_07406930.1| DNA mismatch repair protein [Clostridium difficile QCD-32g58]
 gi|384361374|ref|YP_006199226.1| DNA mismatch repair protein [Clostridium difficile BI1]
 gi|260209908|emb|CBA63855.1| DNA mismatch repair protein [Clostridium difficile CD196]
 gi|260213422|emb|CBE05075.1| DNA mismatch repair protein [Clostridium difficile R20291]
          Length = 636

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 249/520 (47%), Gaps = 62/520 (11%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           +KL     A   +  S  + L  + +    ++    G ++ P E+  +   LR    +  
Sbjct: 45  RKLAENKEARKIIENSNHIPLEGLFNAGSTIDKIEKGMIIEPVELVNIEDFLRGCRKMKA 104

Query: 81  KLTEAAELDGDSLQRYSPLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
            + E         + YSP L     N      +E++I +CI      +   AS++L+ IR
Sbjct: 105 FMLEK--------EFYSPTLSSYALNITECKSIEDEINYCIKSNK--VDSNASKELKKIR 154

Query: 140 AERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
               RN+E     +   L K          I + +I+KR  R  + IK+S+K  + +G  
Sbjct: 155 ----RNIEITEGKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEV-NGTI 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           L+ SS G T F+EP      +     L   E  EE  ILS LT  I +   +IK  ++ +
Sbjct: 210 LDTSSKGNTVFIEPISVSNLSTELTMLKADETIEEYKILSYLTELIFEKISQIKLNIEIL 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            E D+ FA+A ++Q + G+ P +++  ++       I+G KHPLL G +           
Sbjct: 270 SEYDMVFAKAKYSQKIKGITPKINNNGYIKI-----IKG-KHPLLTGDA----------- 312

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP+D ++    R ++ITGPN GGKT ++KT+GL +
Sbjct: 313 -------------------------VPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM + G  + AK       F+ +  DIGD+QS+E  LSTFS HI  I +I+ L +  +LV
Sbjct: 348 LMVQCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMSLSNNSTLV 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG  LA S+L+       + + +THY ++         FENA   F  
Sbjct: 408 LFDEIGSGTEPNEGAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDK 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y++  G + DSNAL I+K +G   +++ RA++ V
Sbjct: 468 ETLEPLYKLTIGKSEDSNALFISKKMGIKNRVLDRAKEYV 507


>gi|407474588|ref|YP_006788988.1| DNA mismatch repair protein [Clostridium acidurici 9a]
 gi|407051096|gb|AFS79141.1| DNA mismatch repair protein [Clostridium acidurici 9a]
          Length = 633

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 162/521 (31%), Positives = 267/521 (51%), Gaps = 64/521 (12%)

Query: 21  QKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
           +++L  TS A  + + Q  P  L+ + DI   +     G +L+PSE+  +   LRA  ++
Sbjct: 44  ERMLRDTSEAKSIILRQGNP-PLAGLFDIEDSIEKIDMGTILNPSELITISDFLRACRSI 102

Query: 79  WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
            K+     E    +L  Y+      ++   + ELE++I   I      I    S++L  I
Sbjct: 103 -KRFMLDQEYIALNLSNYA------RSIYEIEELEDEINTAIKNNR--ISSSTSKELSRI 153

Query: 139 RAERKRNMENLDSLLKKVAAQIFQAG----GIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
           R    R +EN +  +K+   +   +      I + LIT+R     + IK+ +K  + +G 
Sbjct: 154 R----RYIENTEIKIKEELNRFLSSSKNKDSIREFLITERGDTYTIPIKSEYKNKV-EGR 208

Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
            +  SS+G T F+EPK   +FN+  ++L   E  EE  ILS LT  +    +EIK  ++ 
Sbjct: 209 IVATSSTGVTVFVEPKSVQKFNSELLKLKEDEKNEEYQILSFLTGFVLSYIKEIKINLEL 268

Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
           ++E D+ FA+A ++  +DG+ P L+   +      IN++ + +PL+              
Sbjct: 269 MMEYDMIFAKAKYSIDIDGIEPKLNKNGY------INLQKVYNPLI-------------- 308

Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
                                  +  VP+D ++  E R V ITGPN GGKT  +KT+GL 
Sbjct: 309 -----------------------EKYVPLDFQIGKEFRCVTITGPNAGGKTIVLKTIGLL 345

Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
           SL  ++G+++          F+ I  DIGD+QS+E +LSTFS HI  I +I+   +  +L
Sbjct: 346 SLAVQSGIHIKGNKDCEFSVFENIFIDIGDNQSIENSLSTFSAHIRNISNIVNKSNERTL 405

Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
           VL+DE+GSGTDP EG  +A SILQ L     + + T+HY  +    +K   F+NA+ EF 
Sbjct: 406 VLLDELGSGTDPKEGSTIAISILQELYQMGSIVISTSHYDRIKEFSEKHPHFKNASVEFD 465

Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
            ETL P Y+++ G +G+SNAL I + +   + ++ RA+K++
Sbjct: 466 KETLTPLYKLVMGESGESNALWICEKMNLKQSVLNRARKIL 506


>gi|381182856|ref|ZP_09891637.1| DNA mismatch repair protein MutS domain protein [Listeriaceae
           bacterium TTU M1-001]
 gi|380317238|gb|EIA20576.1| DNA mismatch repair protein MutS domain protein [Listeriaceae
           bacterium TTU M1-001]
          Length = 627

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 166/527 (31%), Positives = 266/527 (50%), Gaps = 56/527 (10%)

Query: 14  GKSLEESQKL----LNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
           G S+ +++K     L +TS A A++ S Q L L+ +  I  +L     GQ L P E+  +
Sbjct: 33  GASIYKTKKTITHKLQETSEARAILNSGQNLPLAGVSHIDQLLGKIDRGQELMPQELTEI 92

Query: 69  RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
              LR+   V ++  E  E     L  YS  ++     +F+ E+E++I   I    ++  
Sbjct: 93  ADFLRSTRRV-QQFMEKNEHIAPILTGYSTSIQ-----SFI-EVEDEIYAAIRNGEVV-- 143

Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
           D AS  L  +R       E +   L+K          I +  ++K+  R  V IKAS + 
Sbjct: 144 DEASRALRKVRKAILETQEKISLRLEKFMKNSQNRKYIQEFFVSKKNERYTVPIKASFQK 203

Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
            +P G  ++ S  G T F+EP+   + N+  + L   E AE   IL  LT  + +    I
Sbjct: 204 FVP-GSVVDSSGKGMTVFIEPEAVQKLNDELIGLYAWESAEVYQILMTLTGSVIEKLDGI 262

Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
           K+  D + E D  FA+   ++ M+G+ P      +++ +  I ++  +HP LLG+     
Sbjct: 263 KHNKDVIAEFDFIFAKGKLSRQMEGISP------NINQNGRIWLKNARHPFLLGTD---- 312

Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
                                           VP+  ++    R ++ITGPN GGKT  +
Sbjct: 313 -------------------------------NVPLQFEIGEAYRSLIITGPNAGGKTVVL 341

Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
           KT+GL +LM+ AGL++PA     +  FD +  DIGD+QS+E  LSTFS H+  I DI+  
Sbjct: 342 KTIGLFTLMTMAGLHIPADEGAEMAIFDHVFVDIGDNQSIENALSTFSSHMRNIADIVSR 401

Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
            ++++L+L DEIGSGT+P+EG ALA +IL+    +    + TTHYA++     +   F N
Sbjct: 402 TNKQTLLLFDEIGSGTEPNEGAALAIAILEACYKKGATTIATTHYAEIKKYGSEHPDFMN 461

Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           A   F+ ETL P Y+++ G +G+SNAL IA+ +  D KII++A + +
Sbjct: 462 AKMAFNQETLEPKYQLIIGESGESNALFIARKMNLDDKIIRQAARYM 508


>gi|257886249|ref|ZP_05665902.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
 gi|257822105|gb|EEV49235.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
          Length = 642

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/510 (30%), Positives = 251/510 (49%), Gaps = 58/510 (11%)

Query: 29  AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
           A L +  SQ +    +  I  +      G +LSP+++      LR+   + K        
Sbjct: 53  ARLILESSQHVPFMGLPRIDALTEQVKKGLILSPADLIEYADFLRSSRMITKFF------ 106

Query: 89  DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
             D  Q  +PLL    K+   L  +EE     ID K+    + D AS +L  +R + +  
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASHNLRKVRKQLQLI 160

Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
            + + S L K          I + +I ++     + IKAS+K  + DG  ++ S+   T 
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKASYKNKI-DGTIIDESNKRTTV 219

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP    + N     L   EI+EE  +L+ LT  IA++E  I  L++ +  +D+ FARA
Sbjct: 220 FIEPTVISKLNERYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETITVLDIIFARA 279

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            F++ ++G+ P ++   H+           +HP L                         
Sbjct: 280 KFSREINGITPRINKSEHIIVKQG------RHPFL------------------------- 308

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                       +  VP+D+++  + R ++ITG N GGKT  +KT+GL +LM+  G+ +P
Sbjct: 309 -----------PEHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           AK    L  FD I  D+GDHQ+LE  LSTFSGH+  I  IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEIFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG ALA +I++ + ++  L + TTHY ++         F  AA  F  E LRP Y++ 
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFAGDHEDFVPAAMAFDREALRPKYQLR 477

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
            G TG+S AL IA  +    K+I +A++ +
Sbjct: 478 VGETGESQALWIAHKMDMSMKLIHQAERYL 507


>gi|423390295|ref|ZP_17367521.1| MutS2 family protein [Bacillus cereus BAG1X1-3]
 gi|401640673|gb|EJS58404.1| MutS2 family protein [Bacillus cereus BAG1X1-3]
          Length = 633

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 161/574 (28%), Positives = 292/574 (50%), Gaps = 72/574 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSTNKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGK------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ ++    R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + + +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
           ETL P Y+++ G +G+SNAL IA  +    +++QRA++ +E      ++  +S++ +  +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLQRAKEYMENKEYALEKVNESKIRKPKM 527

Query: 555 MEERRKLESQARTAASLHAEIMD----LYREIED 584
           ++E+R+   + +    ++    D    +Y+EI++
Sbjct: 528 VQEKRENHYEYKIGDRVNLLDYDDFGIIYKEIDN 561


>gi|422933743|ref|ZP_16966518.1| DNA mismatch repair protein MutS, partial [Fusobacterium nucleatum
           subsp. animalis ATCC 51191]
 gi|339891359|gb|EGQ80350.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
           animalis ATCC 51191]
          Length = 797

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 194/699 (27%), Positives = 337/699 (48%), Gaps = 125/699 (17%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L   E+  +   LR V  ++K       L  D L +Y  L E + N   L  +E+ I
Sbjct: 101 GTYLEVEELWDINVNLRTVR-IFK-------LRLDELGKYKQLRETIGNIPNLRLIEDVI 152

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
              I+ +  I  D AS DL  IR  +K     L+  +K+   ++F+    +    + +IT
Sbjct: 153 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQERIIT 207

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
           +R  RM   +K   K L+  GI  + SSSG T F+EP   V  NN    L   E  E   
Sbjct: 208 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 266

Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
           IL L  AE+ ++ ++ I  + ++V+ +D+  A++ +A       P +S++  +S + +  
Sbjct: 267 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENRCEIPTVSNREILSLEKA-- 323

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
               +HP +                                     D  VP+  ++  + 
Sbjct: 324 ----RHPFI-----------------------------------DKDKVVPLTFEIGKDY 344

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
            +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + ++ +F+ + ADIGD QS+EQ+
Sbjct: 345 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 404

Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           LS+FS H+  + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++   + +TT
Sbjct: 405 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 464

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY+ +      +   E A+ EF+ +TL PTYR+L G  G+SNAL IA+ +G    II +A
Sbjct: 465 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 524

Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
                      +K++E ++ + Q+     E +  L EE R L+ +     +L  E     
Sbjct: 525 REYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 583

Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
            I   Y E E    ++  +A+ L  K         + +Q+Q+ LN               
Sbjct: 584 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 629

Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
                    +++ ++E ++    +V+  +   +F V            G++V VKS+ ++
Sbjct: 630 ---------LSTALREEKNKTVEVVKKIKTKINFKV------------GDRVFVKSI-NQ 667

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
            A ++++    ++ +VQ G +++ V  + I+ +   K K
Sbjct: 668 FANILKINTSKESAMVQAGILKLEVPFDEIKIVEEKKEK 706


>gi|417788685|ref|ZP_12436368.1| recombination inhibitory protein MutS2 [Lactobacillus salivarius
           NIAS840]
 gi|334308862|gb|EGL99848.1| recombination inhibitory protein MutS2 [Lactobacillus salivarius
           NIAS840]
          Length = 786

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 197/642 (30%), Positives = 307/642 (47%), Gaps = 97/642 (15%)

Query: 46  DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
           DI G LNS          E+ A+ R LRA N V +   + A    D+  +   L + +  
Sbjct: 79  DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125

Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIF 161
              L E+ +K+   I+    +  D AS  L+ IR +     +   E L+S  +   ++  
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNSYTRGTNSKY- 183

Query: 162 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 221
               +   ++T R  R  + +K  ++     GI  + SSSG T F+EP   VE NN   R
Sbjct: 184 ----LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---R 235

Query: 222 LSNSEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
           L   ++AE      IL  L+ E+A    E+      +  +D   A+A +A  +    PIL
Sbjct: 236 LRQQQVAEREEINRILEELSEELAPYTHELNNNAKILGMLDFTNAKAKYAHSIKATEPIL 295

Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
           S ++ V       +  + HPLL                 +K  V+N              
Sbjct: 296 SKENDVY------LRQVWHPLL----------------DMKKAVKN-------------- 319

Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
                DI +  + + +VITGPNTGGKT ++KTLGL  LM ++GLY+PA    R+  F  I
Sbjct: 320 -----DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNI 374

Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
            ADIGD QS+EQ+LSTFS H++ IV+IL+ +  +SLVL DE+G+GTDP EG ALA SIL 
Sbjct: 375 FADIGDEQSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILD 434

Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
            +  +    V TTHY +L     +     NA+ EF   TL+PTYR+L G  G SNA +I+
Sbjct: 435 AVGAKGSYVVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDIS 494

Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASL 571
           + +G D+ I+  A++L       +     +E+   L+ +R   E +        R A  L
Sbjct: 495 QRLGLDKMIVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEEL 549

Query: 572 HAEIMDLYREIEDEAKDLDRRA---AHLKAKETQQVQQEL--NFAKVQIDTVVQDFENQL 626
           H ++   + + E + +++  +A   A+   +ET++   EL     K+++       E  L
Sbjct: 550 HHDLETNFHQFERQKENMLEQAKERANQIVEETKKKSNELISELRKMKMSAASNIEEGSL 609

Query: 627 RDASADEINSLIKESESAIAAIV-------EAHRPDDDFSVS 661
            DA    +N+L +E+      ++       E H P+DD  V+
Sbjct: 610 IDAQG-RVNALHQETNLKKNKVLRKAKQQQELH-PNDDVMVN 649


>gi|340758447|ref|ZP_08695034.1| MutS2 protein [Fusobacterium varium ATCC 27725]
 gi|251836770|gb|EES65304.1| MutS2 protein [Fusobacterium varium ATCC 27725]
          Length = 778

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 197/659 (29%), Positives = 332/659 (50%), Gaps = 105/659 (15%)

Query: 91  DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENL- 149
           D L +Y  L +   +   L  +E+ I   ID    I  D AS DL  IR  +K    N+ 
Sbjct: 108 DDLNKYKDLRDKFNDVPILRGVEDIINKAIDNNKEI-KDDASLDLRDIRIHKKTLAMNIK 166

Query: 150 ---DSLLKKVA-AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
              D L  +   A++FQ     + +IT+R  R  V +KA  K  +  GI  + SSSG T 
Sbjct: 167 RKFDELFNEPQFAKVFQ-----EKIITERDGRSVVPVKADFKGQIK-GIEHDRSSSGQTV 220

Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
           F+EP   V  NN    L   E  E   IL  +T  I  ++ +I  + + ++ +D+  ARA
Sbjct: 221 FIEPLSIVALNNKNRELEIKEKEEIRKILLRITDYIRNNKDDIDKVGEAIITLDILNARA 280

Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
            +      V P ++++  ++      IE  +HP +  SS+                    
Sbjct: 281 MYGIEKKCVVPNINNREILTL-----IEA-RHPFIPISSV-------------------- 314

Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
                          VP+  ++  +   ++ITGPNTGGKT ++KT GL +LM+ +G+ +P
Sbjct: 315 ---------------VPLTFEIGKDYNTLLITGPNTGGKTVALKTAGLLTLMALSGIPIP 359

Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
           A  H  + +F  + ADIGD QS+EQ+LS+FS H+  + +ILE V++ SLVL+DE+GSGTD
Sbjct: 360 AHEHSSIGFFTGVYADIGDEQSIEQSLSSFSAHLKNVQEILENVTKASLVLLDELGSGTD 419

Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
           P+EG A A +++ YL+D+   +++TTHY+++      +   E A+ EF++ETL PTYR+L
Sbjct: 420 PTEGSAFAMAVIDYLKDKKCKSIITTHYSEVKAHGYNEEGIETASMEFNVETLSPTYRLL 479

Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ----HRKSE- 549
            G  G+SNAL IA+ +G   ++I +A           +K++  ++ +  +     ++ E 
Sbjct: 480 IGIPGESNALTIARRLGVSEEVINKAKSYISDDNKKIEKMISNIKDKADELDVMKKQVEF 539

Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA----KDLDRRAAHLKAKETQQVQ 605
           L ++   ++   E + R    L  E  D+ +E  ++A    K++  +AA L     +++Q
Sbjct: 540 LKEAAQRDKEAFEEKLRI---LEKEKNDILKEAYEKADRMMKEMQSKAAAL----VEKIQ 592

Query: 606 QELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
           +E N  K  I  V +   N LR A  +D+  ++I++ + A            DF V    
Sbjct: 593 KEDN-KKEDIKNVQKSL-NMLRSALQSDKSKTVIEKPKVARKV---------DFKV---- 637

Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
                   GE+V V SL ++ A V+++    +T  VQ G +++ V  ++++ +   K+K
Sbjct: 638 --------GERVFVNSL-NQFANVLKINLSKETTQVQAGILKLEVSLDDVKVVEEKKQK 687


>gi|56965776|ref|YP_177510.1| MutS family DNA mismatch repair protein [Bacillus clausii KSM-K16]
 gi|56912022|dbj|BAD66549.1| MutS family DNA mismatch repair protein [Bacillus clausii KSM-K16]
          Length = 645

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/430 (34%), Positives = 222/430 (51%), Gaps = 53/430 (12%)

Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AG 164
           L  LEE++G CI  +L  + D AS DL  +R    R ++ + + LK  A Q+      A 
Sbjct: 126 LHALEERLGACI--RLGQVDDHASSDLAYVR----RQLQIIQTKLKDKAQQLVNNKRYAP 179

Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
            +    I  R  ++ + +K   +  + +G  ++ SSSGAT F+EP    +       L  
Sbjct: 180 YLQDKTIVDRGGKLALAVKKEFRTKV-EGTVIDQSSSGATLFIEPTALGDIQEERALLQI 238

Query: 225 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 284
           +E AE   IL  LT  +   E EI   ++ +   D+ FA+A +   +D   P L+     
Sbjct: 239 AEEAEVERILYELTEMVLNHETEIHIAIETMHHYDVLFAKAKYCASIDAAVPTLNE---- 294

Query: 285 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 344
             +  I++   +HP L GS                                     VP+ 
Sbjct: 295 --EYRIDLRNARHPKL-GSK-----------------------------------AVPLS 316

Query: 345 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 404
           IKV+   R +VITGPNTGGKT ++KT+GL +LM+++G+ +PA+    +  F  +  DIGD
Sbjct: 317 IKVDEHERALVITGPNTGGKTVTLKTVGLLTLMAQSGVPIPAEPESSIAIFRQVFVDIGD 376

Query: 405 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
            QS+  NLSTFS  +  I+ IL   + +SL+LIDE+GSGTDP EG+ALAT IL+ L  + 
Sbjct: 377 GQSIADNLSTFSSRMVNIISILRQANDQSLILIDELGSGTDPGEGMALATVILEQLFQKG 436

Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
              + TTHY+++     K   F NAA EF L TL PTYR++ G +G S A +IA  +G  
Sbjct: 437 ATLMATTHYSEIKQFATKTPGFVNAAMEFDLATLAPTYRLIIGESGKSQAFDIAIKLGLH 496

Query: 525 RKIIQRAQKL 534
            K+++RA  L
Sbjct: 497 PKMVERAHML 506


>gi|417982883|ref|ZP_12623531.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           21/1]
 gi|417995567|ref|ZP_12635859.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           M36]
 gi|417998549|ref|ZP_12638768.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           T71499]
 gi|418001406|ref|ZP_12641551.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           UCD174]
 gi|418014595|ref|ZP_12654190.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           Lpc-37]
 gi|410529338|gb|EKQ04156.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           21/1]
 gi|410537240|gb|EKQ11818.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           M36]
 gi|410540964|gb|EKQ15468.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           T71499]
 gi|410546729|gb|EKQ20974.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           UCD174]
 gi|410553224|gb|EKQ27228.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           Lpc-37]
          Length = 786

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 214/748 (28%), Positives = 352/748 (47%), Gaps = 100/748 (13%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G  +VQ  Q P    +   Q L      A A+     + +  +E+I   L     G +L+
Sbjct: 27  GRRLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
             E+ ++ R L+ V+ + K LT+   ++D      +  L  L ++   L +L  ++   +
Sbjct: 86  GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
           D    +  D AS  L  +R       E + S+  ++  ++       Q+  +  P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R  + +KA ++     G+  + S++G T F+EP+  V  NN       +E+AE   IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
           + L+ E+A    +IK     +   D   A+A  A+      P+      VS D+ + +  
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
            +HPL+               +P K         VG+            DI +  + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
           VITGPNTGGKT ++KTLGL  LM ++GL++PA +  R+  FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389

Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
           FS H+  IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL  + +     V TTHY 
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449

Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
           +L        +  NA+ EF  +TL+PTYR+L G  G SNA +I+  +G    I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPSVIVERAKSM 509

Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
           +         H  + +   L ++R+  E+       Q   A S+H E+   Y++   E  
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-- 562

Query: 588 DLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDF-ENQLRDASADEINSLIKESE 642
               R A L     QQ + + N     A+ + D +++   + QL +    + N LI    
Sbjct: 563 ----RDAQL-----QQAKDKANTLVDKAQTKADKIIKQLRQMQLTNPGTVKENQLI---- 609

Query: 643 SAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
           +A  A+ + H+  P     +            G++V V S  D+  T++E   D     V
Sbjct: 610 AAKTALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQV 667

Query: 701 QYGKMRVRVKKNNIRPIPNSKRKNAANP 728
           Q G ++++V  + +  I  SK+  A  P
Sbjct: 668 QLGILKMKVPTDELEKIKPSKQSAAQRP 695


>gi|255101281|ref|ZP_05330258.1| DNA mismatch repair protein [Clostridium difficile QCD-63q42]
          Length = 636

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 249/520 (47%), Gaps = 62/520 (11%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           +KL     A   +  S  + L  + +    ++    G ++ P E+  +   LR    +  
Sbjct: 45  RKLAENKEARKIIENSNHIPLEGLFNAGSTIDKIEKGMIIEPVELVNIEDFLRGCRKMKA 104

Query: 81  KLTEAAELDGDSLQRYSPLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
            + E         + YSP L     N      +E++I +CI      +   AS++L+ IR
Sbjct: 105 FMLEK--------EFYSPTLSSYALNITECKSIEDEINYCIKSNK--VDSNASKELKKIR 154

Query: 140 AERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
               RN+E     +   L K          I + +I+KR  R  + IK+S+K  + +G  
Sbjct: 155 ----RNIEITEGKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEV-NGTI 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           L+ SS G T F+EP      +     L   E  EE  ILS LT  I +   +IK  ++ +
Sbjct: 210 LDTSSKGNTVFIEPISVSNLSTELTMLKADETIEEYKILSYLTELIFEKISQIKLNIEIL 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            E D+ FA+A ++Q + G+ P +++  ++       I+G KHPLL G +           
Sbjct: 270 SEYDMVFAKAKYSQKIKGITPKINNNGYIKI-----IKG-KHPLLTGDA----------- 312

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP+D ++    R ++ITGPN GGKT ++KT+GL +
Sbjct: 313 -------------------------VPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM + G  + AK       F+ +  DIGD+QS+E  LSTFS HI  I +I+ L +  +LV
Sbjct: 348 LMVQCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMSLSNNSTLV 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG  LA S+L+       + + +THY ++         FENA   F  
Sbjct: 408 LFDEIGSGTEPNEGAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDK 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y++  G + DSNAL I+K +G   +++ RA++ V
Sbjct: 468 ETLEPLYKLTIGKSEDSNALFISKKMGIKNRVLDRAKEYV 507


>gi|385816182|ref|YP_005852573.1| Mismatch repair protein [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
 gi|325126219|gb|ADY85549.1| Mismatch repair protein [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 787

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 195/627 (31%), Positives = 301/627 (48%), Gaps = 107/627 (17%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           +LD AS DL  +R  R   +     + +K+ A      G  + + ++T R  R  + +K 
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMIAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            ++Y    G+  + S+SG T F+EP   +  NN   RL N  +AEE   +  +  E++  
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259

Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
            RE    IK +   + E+D   A+A  A+ M    P LS+      D S  + G +HPL+
Sbjct: 260 AREEMETIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313

Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
                          +P                    D  V  DI +  +   ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338

Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
           TGGKT ++KT GL  LM+++GL++PA     +  FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398

Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
            IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R +    +VTTHY +L    
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 458

Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
               R  NA+ EF ++TL PTYR+  G  G SNA  IA+ +G    ++  A+KL+     
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 518

Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
           +   H   EL +   + +   E++ +   SL            D AK L+++        
Sbjct: 519 DI-NHMIDELNK---QTKLATENKQKLQTSL------------DRAKQLEKKLQDALDIY 562

Query: 601 TQQVQQELNFA-----------KVQIDTVVQDFE-----------NQLRDASADEINSLI 638
            Q+VQ++L+FA           + + D ++ + E           NQL DA   E N L 
Sbjct: 563 NQRVQKQLDFALDRANEIVAKKRKKADKIIAELEEARKEGMQVKTNQLMDAKG-EFNQLA 621

Query: 639 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 698
           K+ E+ +A             V +        Q G++V V S G +  TV +  G+ D  
Sbjct: 622 KQ-EANLAK----------NKVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHD-Y 668

Query: 699 LVQYGKMRVRVKKNNIRPIPNSKRKNA 725
            V  G+++++V   +I  +   +++ A
Sbjct: 669 EVSLGRIKLKVTDRDIDKLAAGQKQQA 695


>gi|423401755|ref|ZP_17378928.1| hypothetical protein ICW_02153 [Bacillus cereus BAG2X1-2]
 gi|401653133|gb|EJS70684.1| hypothetical protein ICW_02153 [Bacillus cereus BAG2X1-2]
          Length = 633

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 156/521 (29%), Positives = 265/521 (50%), Gaps = 67/521 (12%)

Query: 24  LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + +S   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVESIYHIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGK------------ 311

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP+  ++    R ++ITGPN GGKT  +KT+GL +
Sbjct: 312 ------------------------VVPLHFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + V +THY ++  L +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRLSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
           ETL P Y+++ G +G+SNAL IA  +     +++RA++ +E
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKEYME 508


>gi|421527538|ref|ZP_15974138.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum ChDC
           F128]
 gi|402256316|gb|EJU06798.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum ChDC
           F128]
          Length = 778

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 196/699 (28%), Positives = 333/699 (47%), Gaps = 125/699 (17%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L   E+  +   LR V     +L        D L +Y  L E + N   L  +E+ I
Sbjct: 82  GTYLEVEELWDINVNLRTVRIFKSRL--------DELGKYKQLRETIGNIPNLRVVEDVI 133

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
              I+ +  I  D AS DL  IR  +K     L+  +K+   ++F+    +    + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQEKIIT 188

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
           +R  RM   +K   K L+  GI  + SSSG T F+EP   V  NN    L   E  E   
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247

Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
           IL L  AE+ ++ R+ I  + ++V+ +D+  A++ +A   D  C I +    VS    ++
Sbjct: 248 IL-LRIAELLRNNRDDILTIGEKVMYLDILNAKSIYAN--DNRCEIPT----VSNREILS 300

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
           +E  +HP +                                     D  VP+  ++  + 
Sbjct: 301 LEKARHPFI-----------------------------------DKDKVVPLTFEIGKDY 325

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
            +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385

Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           LS+FS H+  + +IL  V++ SLVL+DE+GSGTDP EG A A +++ YL ++   + +TT
Sbjct: 386 LSSFSAHLKNVKEILGAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKAKSFITT 445

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY+ +      +   E A+ EF+ +TL PTYR+L G  G+SNAL IA+ +G    II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505

Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
                      +K++E ++ + Q+     E +  L EE R L+ +     +L  E     
Sbjct: 506 RAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564

Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
            I   Y E E    ++  +A+ L  K         + +Q+Q+ LN               
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610

Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
                    +++ ++E ++    +V+  +   DF              G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVDFKA------------GDRVFVKSI-NQ 648

Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
            A ++++    ++  VQ G +++ V  + I+ +   K K
Sbjct: 649 FANILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEK 687


>gi|423088600|ref|ZP_17076979.1| MutS domain V protein [Clostridium difficile 70-100-2010]
 gi|357559486|gb|EHJ40934.1| MutS domain V protein [Clostridium difficile 70-100-2010]
          Length = 636

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 249/520 (47%), Gaps = 62/520 (11%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           +KL     A   +  S  + L  + +    ++    G ++ P E+  +   LR    +  
Sbjct: 45  RKLAENKEARKIIENSNHIPLEGLFNAGSTIDKIEKGMIIEPVELVNIEDFLRGCRKMKA 104

Query: 81  KLTEAAELDGDSLQRYSPLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
            + E         + YSP L     N      +E++I +CI      +   AS++L+ IR
Sbjct: 105 FMLEK--------EFYSPTLSSYALNITECKSIEDEINYCIKSNK--VDSNASKELKKIR 154

Query: 140 AERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
               RN+E     +   L K          I + +I+KR  R  + IK+S+K  + +G  
Sbjct: 155 ----RNIEITEGKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEV-NGTI 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           L+ SS G T F+EP      +     L   E  EE  ILS LT  I +   +IK  ++ +
Sbjct: 210 LDTSSKGNTVFIEPISVSNLSTELTMLKADETIEEYKILSYLTELIFEKISQIKLNIEIL 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            E D+ FA+A ++Q + G+ P +++  ++       I+G KHPLL G +           
Sbjct: 270 SEYDMLFAKAKYSQKIKGITPKINNNGYIKI-----IKG-KHPLLTGDA----------- 312

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP+D ++    R ++ITGPN GGKT ++KT+GL +
Sbjct: 313 -------------------------VPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM + G  + AK       F+ +  DIGD+QS+E  LSTFS HI  I +I+ L +  +LV
Sbjct: 348 LMVQCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMSLSNNSTLV 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG  LA S+L+       + + +THY ++         FENA   F  
Sbjct: 408 LFDEIGSGTEPNEGAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDK 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y++  G + DSNAL I+K +G   +++ RA++ V
Sbjct: 468 ETLEPLYKLTIGKSEDSNALFISKKMGIKNRVLDRAKEYV 507


>gi|34762391|ref|ZP_00143393.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27887973|gb|EAA25039.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 718

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 191/698 (27%), Positives = 334/698 (47%), Gaps = 123/698 (17%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L   E+  +   LR V     +L        D L +Y  L E + N   L  +E+ I
Sbjct: 22  GTYLEVEELWDINVNLRIVRIFKSRL--------DELGKYKQLRETIGNIPNLRVIEDVI 73

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
              I+ +  I  D AS DL  IR  +K     L+  +K+   ++F+    +    + +IT
Sbjct: 74  NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQEKIIT 128

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
           +R  RM   +K   K L+  GI  + SSSG T F+EP   V  NN    L   E  E   
Sbjct: 129 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 187

Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
           IL L  AE+ ++ ++ I  + ++V+ +D+  A++ +A       PI++++  +S + +  
Sbjct: 188 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENKCEIPIVNNKEILSLEKA-- 244

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
               +HP +                                     D  VP+  ++  + 
Sbjct: 245 ----RHPFI-----------------------------------DKDKVVPLTFEIGKDY 265

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
            +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + ++ +F+ + ADIGD QS+EQ+
Sbjct: 266 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 325

Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           LS+FS H+  + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++   + +TT
Sbjct: 326 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 385

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY+ +      +   E A+ EF+ +TL PTYR+L G  G+SNAL IA+ +G    II +A
Sbjct: 386 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 445

Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
                      +K++E ++ + Q+     E +  L EE R    +A+    +  +     
Sbjct: 446 RAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEARIDRERAKQETLIIEKQKNEI 505

Query: 575 IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFENQ 625
           I   Y E E    ++  +A+ L  K         + +Q+Q+ LN                
Sbjct: 506 IKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM--------------- 550

Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 685
                   +++ ++E ++    +V+  +   +F V            G++V VKS+ ++ 
Sbjct: 551 --------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQF 589

Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           A ++++    ++  VQ G +++ V  + I+ +   K K
Sbjct: 590 ANILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEK 627


>gi|254302123|ref|ZP_04969481.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322315|gb|EDK87565.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 778

 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 197/698 (28%), Positives = 332/698 (47%), Gaps = 123/698 (17%)

Query: 57  GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
           G  L   E+  +   LR V     +L        D L +Y  L E + N   L  +E+ I
Sbjct: 82  GTYLEVEELWDINVNLRTVRIFKSRL--------DELGKYKQLRETIGNIPNLRVIEDVI 133

Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
              I+ +  I  D AS DL  IR  +K     L+  +K+   ++F+    +    + +IT
Sbjct: 134 NKTINLEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQEKIIT 188

Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
           +R  RM   +K   K L+  GI  + SSSG T F+EP   V  NN    L   E  E   
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247

Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
           IL L  AE+ ++ +E I  + ++V+ +D+  A++ +A   D  C I +    VS    ++
Sbjct: 248 IL-LRIAELLRNNKEDILTIGEKVMYLDILNAKSIYAN--DNRCEIPT----VSNREILS 300

Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
           +E  +HP +                                     D  VP+  ++  + 
Sbjct: 301 LEKARHPFI-----------------------------------DKDKVVPLTFEIGKDY 325

Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
            +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385

Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
           LS+FS H+  + +IL  V++ SLVL+DE+GSGTDP EG A A +++ YL ++   + +TT
Sbjct: 386 LSSFSAHLKNVKEILGAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445

Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           HY+ +      +   E A+ EF+ +TL PTYR+L G  G+SNAL IA+ +G    II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505

Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAA---------- 569
                      +K++E ++ + Q+     E +  L EE R    +A+             
Sbjct: 506 RAYISEDNKKVEKMIENIKTKSQELDEMRERFVRLQEEARLDRERAKQETLIIEKQKNEI 565

Query: 570 --SLHAEIMDLYREIEDEAKDLDRRAAH-LKAKE-TQQVQQELNFAKVQIDTVVQDFENQ 625
             S + E   +  E+  +A  L  R  H  K KE  +Q+Q+ LN                
Sbjct: 566 IKSAYEEAEKMMNEMRAKASALVERIQHEEKNKEDAKQIQKNLNM--------------- 610

Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 685
                   +++ ++E ++    +V+  +   DF              G++V VKS+ ++ 
Sbjct: 611 --------LSTALREEKNKTVEVVKKIKTKVDFKA------------GDRVFVKSI-NQF 649

Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           A ++++    ++  VQ G +++ V  + I+ +   K K
Sbjct: 650 ANILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEK 687


>gi|168335130|ref|ZP_02693238.1| DNA mismatch repair protein [Epulopiscium sp. 'N.t. morphotype B']
          Length = 626

 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 257/512 (50%), Gaps = 57/512 (11%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           QK L++T  A++++ +  + L  + +I  I+     G +L  S +  +   L  V  V  
Sbjct: 44  QKRLDETKEAISLL-ANTIPLQGVGNIQNIIEQVEKGIVLDCSNLVQISDFLYGVRKVIN 102

Query: 81  KLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
              +         + Y+P+L    K+   L  +E+ I   I    + I   AS++L+ IR
Sbjct: 103 FFADK--------EAYTPILASYSKSLTALKNIEDDINQSITKGRVDI--NASKELKRIR 152

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
                    ++  L+K          ++  +ITKR+ R  + +KA++K  +  G  ++ S
Sbjct: 153 RHIDIEQSKIEEKLQKFIT--INKKYLESTIITKRQDRFTIQVKAAYKNQVT-GTQIDKS 209

Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
           + G T F+EP+   +  +  + L   E  EE  IL++LT  +    +EIK  ++ + E D
Sbjct: 210 NKGNTIFIEPQIIQKHTSALISLKAEEELEEYKILAMLTEIVNSKLQEIKLNVEVIAEYD 269

Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
           L FA+  +A  +D   P       ++ D    I   KHPLL G+                
Sbjct: 270 LIFAKGKYAIAIDAAMP------KINVDGYTKIIAGKHPLLEGNV--------------- 308

Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
                                +P+D+++      + ITGPN GGKT  +KT+GL ++M++
Sbjct: 309 ---------------------IPLDLEIGDTYSALAITGPNAGGKTVVLKTVGLLTIMTQ 347

Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
            GL++PAK++  +  +  I  DIGD+QSLE +LSTFS HI  +  I++   +++LVL+DE
Sbjct: 348 LGLFIPAKDNSHIAIYSKIFVDIGDNQSLENSLSTFSSHIKNLATIIKQADKQTLVLLDE 407

Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
           +GSGTDP+EG ALA +IL+ L  +    +VTTHY ++         F  A  EF+ ETL 
Sbjct: 408 LGSGTDPNEGAALAIAILEELYKKQTTIIVTTHYGEIKNYSKSHPDFNTAKMEFNEETLE 467

Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
           P Y+++ G +G SNAL I++ +G    +I+RA
Sbjct: 468 PLYKLVIGKSGKSNALYISQKMGVPNHVIERA 499


>gi|340751175|ref|ZP_08687998.1| MutS2 protein [Fusobacterium mortiferum ATCC 9817]
 gi|340562266|gb|EEO36747.2| MutS2 protein [Fusobacterium mortiferum ATCC 9817]
          Length = 778

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 193/637 (30%), Positives = 321/637 (50%), Gaps = 89/637 (13%)

Query: 91  DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
           + L +Y  L +   +   +  +E+ I   ID    I  D AS DL  IR  +K    N+ 
Sbjct: 108 EDLGKYRDLKDRYHDVPVMRGIEDIINKAIDNNKEI-KDDASLDLRDIRIHKKTLSMNIK 166

Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
               ++  +   A    + +IT+R  R  V +KA  K L+  GI  + SSSG T F+EP 
Sbjct: 167 RKFDELFDEPSFAKAFQERIITERDGRSVVPVKADFKGLIK-GIEHDRSSSGQTVFIEPL 225

Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
             V  NN    L   E  E   IL  +T  +  +  +I  + + +L +D+  ARA +   
Sbjct: 226 SIVALNNKMRELELKEKEEIRKILLRITEHVRNNREDIDAVGEAILSLDILNARAVYGIE 285

Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
            + V P ++++  +S   +      +HP +                P             
Sbjct: 286 KNCVIPNINNREMLSLVDA------RHPFI----------------P------------- 310

Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
                 +D  VP+  ++  +   ++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  H 
Sbjct: 311 ------ADKIVPLTFEIGKDYNTLLITGPNTGGKTVALKTAGLLTLMALSGIPIPAHEHT 364

Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
            + +F  + ADIGD QS+EQ+LS+FS H+  + +ILE V++ SLVL+DE+GSGTDP EG 
Sbjct: 365 SIGFFTGVYADIGDEQSIEQSLSSFSAHLKNVQEILESVNKSSLVLLDELGSGTDPIEGS 424

Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
           A A +++ YLRDR   + +TTHY+++      +   E A+ EF + TL PTYR+L G  G
Sbjct: 425 AFAMAVIDYLRDRKCKSFITTHYSEVKAHGYNEEGIETASMEFDVNTLSPTYRLLIGIPG 484

Query: 511 DSNALNIAKSIGFDRKIIQRAQ-------KLVERLRPERQQHRKSELYQSLMEERRKLES 563
           +SNAL IAK +G   ++I++A+       K +E++    ++  K++  +++ ++   L++
Sbjct: 485 ESNALTIAKRLGVSDEVIEKAKSYIGDDNKKIEKMIANIKE--KADELEAMKQQVEFLKA 542

Query: 564 QARTAASLHAEIMDLYREIEDEAKDL--------DRRAAHLKAKE---TQQVQQELNFAK 612
            A+     +AE +   R +E E  ++        D+    ++AK     +++Q+E N  K
Sbjct: 543 AAQRDRDEYAEKL---RVLEKEKNEILKEAYEKADKMMKEMQAKAVALVEKIQKEEN--K 597

Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
            +    VQ   N LR A  D+ N  ++E +  IA  V       D+ V            
Sbjct: 598 KEDVKNVQKSLNMLRSALQDDRNKNVEE-KPKIARKV-------DYKV------------ 637

Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
           G++V V SL ++ A V+++ G  +TV VQ G +++ V
Sbjct: 638 GDKVFVNSL-NQFANVLKINGGKETVQVQAGILKLEV 673


>gi|417988978|ref|ZP_12629502.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           A2-362]
 gi|410540705|gb|EKQ15217.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           A2-362]
          Length = 786

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 212/744 (28%), Positives = 351/744 (47%), Gaps = 92/744 (12%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G  +VQ  Q P    +   Q L      A A+     + +  +E+I   L     G +L+
Sbjct: 27  GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
             E+ ++ R L+ V+ + K LT+   ++D      +  L  L ++   L +L  ++   +
Sbjct: 86  GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
           D    +  D AS  L  +R       E + S+  ++  ++       Q+  +  P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R  + +KA ++     G+  + S++G T F+EP+  V  NN       +E+AE   IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
           + L+ E+A    +IK     +   D   A+A  A+      P+      VS D+ + +  
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
            +HPL+               +P K         VG+            DI +  + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
           VITGPNTGGKT ++KTLGL  LM ++GL++PA +  R+  FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389

Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
           FS H+  IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL  + +     V TTHY 
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEIGAYVVATTHYP 449

Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
           +L        +  NA+ EF  +TL+PTYR+L G  G SNA +I+  +G    I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPGVIVERAKSM 509

Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
           +         H  + +   L ++R+  E+       Q   A S+H E+   Y++   E +
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-R 563

Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIA 646
           D   + A  KA         ++ A+ + D +++     QL +    + N LI    +A  
Sbjct: 564 DAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613

Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
           A+ + H+  P     +            G++V V S  D+  T++E   D     VQ G 
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671

Query: 705 MRVRVKKNNIRPIPNSKRKNAANP 728
           ++++V  + +  I  SK+  A  P
Sbjct: 672 LKMKVPTDELEKIKPSKQSAAQRP 695


>gi|81428007|ref|YP_395006.1| MutS family DNA mismatch repair protein [Lactobacillus sakei subsp.
           sakei 23K]
 gi|123564679|sp|Q38YN3.1|MUTS2_LACSS RecName: Full=MutS2 protein
 gi|78609648|emb|CAI54694.1| DNA mismatch repair protein, MutS family [Lactobacillus sakei
           subsp. sakei 23K]
          Length = 787

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 186/620 (30%), Positives = 303/620 (48%), Gaps = 80/620 (12%)

Query: 41  LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
           L  +E+I   L     G +L+ SE+  + R LRA + V +   +   L+ D L+    L 
Sbjct: 65  LPQLENIRPHLKRIEIGAMLNGSELAQIGRVLRATSAVVRFFDD---LEKDELE-LKALP 120

Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
           EL+     L +L E+I   +      ILD AS  L  +R      ++ L+  ++   A  
Sbjct: 121 ELVAQFVTLPQLTERIRSSV-ADDGAILDTASTKLRGLRT----GLKQLEGQIRSRMASY 175

Query: 161 F---QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
               +A  +  P++T R  R  + +K  ++     G+  + S+SG T FMEP+  +E NN
Sbjct: 176 THGAKAKYLSDPIVTIRNDRYVIPVKQEYRGQF-GGVVHDQSASGQTLFMEPQAIMELNN 234

Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
              +L   E  E   IL+ L+  I      I    + + ++D   A+A  A+ +    P+
Sbjct: 235 RLRQLQIEEQQEIERILAELSEAIMPERHNILANAELLGQLDFVNAKAQLAKALKATEPL 294

Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
           +++++HV    +      +HPL+  + +                                
Sbjct: 295 INAENHVDLKQA------RHPLIDATKV-------------------------------- 316

Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
              V  DI +  + + +V+TGPNTGGKT ++KTLGL  +M+++GL++ A+   ++  F  
Sbjct: 317 ---VANDIAIGADYQAIVVTGPNTGGKTITLKTLGLVQVMAQSGLFITAREESQVGVFSD 373

Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
           I ADIGD QS+EQNLSTFS H+  I+ IL+ +   SLVL+DE+G+GTDP EG ALA +IL
Sbjct: 374 IFADIGDEQSIEQNLSTFSAHMENIIQILKQIDDRSLVLLDELGAGTDPQEGAALAIAIL 433

Query: 458 QYLRDRVGL----AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
               D++G+     V +THY +L        +  NA+ EF + TL+PTYR+L G  G SN
Sbjct: 434 ----DQIGIVGANVVASTHYPELKIYGYNRPQTINASMEFDVATLQPTYRLLIGVPGRSN 489

Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
           A +I+  +G    I+ +A++L   +  E Q    + +   L  +R+  E++ +       
Sbjct: 490 AFDISTRLGLPNSIVDQAKQL---MNDESQD--LNNMITDLENQRKAAETEYQALRHELT 544

Query: 574 EIMDLYREIEDEAKDL--DRRAAHLKAKETQQV---QQELNFAKV-------QIDTVVQD 621
           E  DL++++    +    DR     KAKE       + E+   KV       Q++   Q 
Sbjct: 545 EATDLHQQLSTAYQQFFEDRETEMTKAKEKANAIVEKAEVKADKVITKLRDMQMNQGAQI 604

Query: 622 FENQLRDASADEINSLIKES 641
            ENQL DA A E+  L +E+
Sbjct: 605 KENQLIDAKA-ELGQLHQET 623


>gi|417986118|ref|ZP_12626693.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           32G]
 gi|410526874|gb|EKQ01752.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           32G]
          Length = 786

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 212/744 (28%), Positives = 350/744 (47%), Gaps = 92/744 (12%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G  +VQ  Q P    +   Q L      A A+     + +  +E+I   L     G +L+
Sbjct: 27  GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
             E+ ++ R L+ V+ + K LT+   ++D      +  L  L ++   L +L  ++   +
Sbjct: 86  GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
           D    +  D AS  L   R       E + S+  ++  ++       Q+  +  P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGFR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R  + +KA ++     G+  + S++G T F+EP+  V  NN       +E+AE   IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
           + L+ E+A    +IK     +   D   A+A  A+      P+      VS D+ + +  
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
            +HPL+               +P K         VG+            DI +  + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
           VITGPNTGGKT ++KTLGL  LM ++GL++PA +  R+  FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389

Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
           FS H+  IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL  + +     V TTHY 
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449

Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
           +L        +  NA+ EF  +TL+PTYR+L G  G SNA +I+  +G    I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPGAIVERAKSM 509

Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
           +         H  + +   L ++R+  E+       Q   A S+H E+   Y++   E +
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-R 563

Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIA 646
           D   + A  KA         ++ A+ + D +++     QL +    + N LI    +A  
Sbjct: 564 DAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613

Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
           A+ + H+  P     +            G++V V S  D+  T++E   D     VQ G 
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671

Query: 705 MRVRVKKNNIRPIPNSKRKNAANP 728
           ++++V  + +  I  SK+  A  P
Sbjct: 672 LKMKVPTDELEKIKPSKQSAAQRP 695


>gi|423469704|ref|ZP_17446448.1| MutS2 family protein [Bacillus cereus BAG6O-2]
 gi|402437783|gb|EJV69804.1| MutS2 family protein [Bacillus cereus BAG6O-2]
          Length = 633

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 265/520 (50%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P+E+ +V   LR    + K +
Sbjct: 47  LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAG----GIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+++K  +   I 
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSVNKKYIQEFFISKKDDRYTIPIKSTYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N         E  EE  IL+ L+  I ++   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASWKAEEAMEEYQILATLSGMILENIYHIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   H      I++   KHPLL G             
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGH------IHLVNCKHPLLTGQV----------- 312

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP++ ++  E R ++ITGPN GGKT  +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + + +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLTGCITIASTHYGEIKRFSEMHGDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +     ++QRA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYM 507


>gi|418029387|ref|ZP_12667930.1| hypothetical protein LDBUL1632_00724 [Lactobacillus delbrueckii
           subsp. bulgaricus CNCM I-1632]
 gi|354690062|gb|EHE90019.1| hypothetical protein LDBUL1632_00724 [Lactobacillus delbrueckii
           subsp. bulgaricus CNCM I-1632]
          Length = 787

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 191/592 (32%), Positives = 284/592 (47%), Gaps = 102/592 (17%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           +LD AS DL  +R  R   +     + +K+ A      G  + + ++T R  R  + +K 
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMIAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            ++Y    G+  + S+SG T F+EP   +  NN   RL N  +AEE   +  +  E++  
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259

Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
            RE    IK +   + E+D   A+A  A+ M    P LS+      D S  + G +HPL+
Sbjct: 260 AREEMETIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313

Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
                          +P                    D  V  DI +  +   ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338

Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
           TGGKT ++KT GL  LM+++GL++PA     +  FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398

Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
            IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R +    +VTTHY +L    
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 458

Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
               R  NA+ EF ++TL PTYR+  G  G SNA  IA+ +G    ++  A+KL+     
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 518

Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
           +   H   EL +   + +   E++ +   SL            D AK L+++        
Sbjct: 519 DI-NHMIDELNK---QTKLATENKQKLQTSL------------DRAKQLEKKLQDALDIY 562

Query: 601 TQQVQQELNFA-----------KVQIDTVVQDFE-----------NQLRDASADEINSLI 638
            Q+VQ++L+FA           + + D ++ + E           NQL DA   E N L 
Sbjct: 563 NQRVQKQLDFALDRANEIVAKKRKKADKIIAELEEARKEGMQVKTNQLMDAKG-EFNQLA 621

Query: 639 K-ESESAIAAIVEAHRP------DDDFSV-SETNTSSFTPQFGEQVHVKSLG 682
           K E   A   +++  +       DD   V S   T + T Q GE  +  SLG
Sbjct: 622 KQEVNLAKNKVLQKEKKRHHVQVDDKVKVLSYGQTGTVTKQLGEHDYEVSLG 673


>gi|422314862|ref|ZP_16396313.1| MutS2 protein [Fusobacterium periodonticum D10]
 gi|404593261|gb|EKA94832.1| MutS2 protein [Fusobacterium periodonticum D10]
          Length = 778

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 194/708 (27%), Positives = 338/708 (47%), Gaps = 116/708 (16%)

Query: 44  IEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLEL 102
           + +I G+++   + G  L   E+  +   LR V     +L        D L +Y  L + 
Sbjct: 68  LRNINGLMDKIKLIGTYLEVEELWDINVNLRTVRVFKARL--------DELGKYKQLRDT 119

Query: 103 LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ 162
           + N   L  +E+ I   I+ +  I  D AS DL  IR  +K    N+    +++  +   
Sbjct: 120 IGNIPNLRMIEDVINKTINPEKEI-KDDASLDLRDIRLHKKTLNMNIKRKFEELFDEPSL 178

Query: 163 AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 222
           A    + +IT+R  RM   +K   K L+  GI  + SSSG T F+EP   V  NN    L
Sbjct: 179 ANAFQERIITERDGRMVTPVKFDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMREL 237

Query: 223 SNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 281
              E  E   IL L  AE+ ++ R+ I  + D+ L +D+  A++ +A  +D  C I +  
Sbjct: 238 ETKEKEEIRKIL-LRIAELLRNNRDDILAIGDKALYLDILNAKSIYA--VDNKCEIPT-- 292

Query: 282 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 341
             VS    +++E  +HP +                                     D  V
Sbjct: 293 --VSNREVLSLEKARHPFI-----------------------------------DKDKVV 315

Query: 342 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 401
           P+  ++  +  +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA  + ++ +F+ + AD
Sbjct: 316 PLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIAIPASENSKIGFFEGVFAD 375

Query: 402 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
           IGD QS+EQ+LS+FS H+  + +IL  V++ SLVL+DE+GSGTDP EG A A +++ YL 
Sbjct: 376 IGDEQSIEQSLSSFSAHLKNVKEILAGVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLN 435

Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
           ++   + +TTHY+ +      +   E A+ EF+ +TL PTYR+L G  G+SNAL IA+ +
Sbjct: 436 EKKAKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRM 495

Query: 522 GFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
           G    II +A           +K++E ++ + Q+  +     + +EE  +L+ +     +
Sbjct: 496 GLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLEEEARLDRERAKQET 555

Query: 571 LHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQI 615
           L  E      I   Y E E    ++  +A+ L  K         + +Q+Q+ LN      
Sbjct: 556 LIIEKQKNEIIKAAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM----- 610

Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 675
                             +++ ++E ++    +V+  +   +F V            G++
Sbjct: 611 ------------------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDR 640

Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           V VKS+ ++ A ++++    ++  VQ G +++ V    I+ +   K K
Sbjct: 641 VFVKSI-NQFANILKINTSKESASVQAGILKLEVPFEEIKIVEEKKEK 687


>gi|239629718|ref|ZP_04672749.1| MutS family ATPase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301065846|ref|YP_003787869.1| mutS family ATPase [Lactobacillus casei str. Zhang]
 gi|417980047|ref|ZP_12620732.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           12A]
 gi|418004482|ref|ZP_12644505.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           UW1]
 gi|239528404|gb|EEQ67405.1| MutS family ATPase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300438253|gb|ADK18019.1| MutS family ATPase [Lactobacillus casei str. Zhang]
 gi|410525947|gb|EKQ00841.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           12A]
 gi|410549791|gb|EKQ23945.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
           UW1]
          Length = 786

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 212/744 (28%), Positives = 351/744 (47%), Gaps = 92/744 (12%)

Query: 2   GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
           G  +VQ  Q P    +   Q L      A A+     + +  +E+I   L     G +L+
Sbjct: 27  GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85

Query: 62  PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
             E+ ++ R L+ V+ + K LT+   ++D      +  L  L ++   L +L  ++   +
Sbjct: 86  GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139

Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
           D    +  D AS  L  +R       E + S+  ++  ++       Q+  +  P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191

Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
             R  + +KA ++     G+  + S++G T F+EP+  V  NN       +E+AE   IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250

Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
           + L+ E+A    +IK     +   D   A+A  A+      P+      VS D+ + +  
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304

Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
            +HPL+               +P K         VG+            DI +  + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329

Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
           VITGPNTGGKT ++KTLGL  LM ++GL++PA +  R+  FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389

Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
           FS H+  IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL  + +     V TTHY 
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449

Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
           +L        +  NA+ EF  +TL+PTYR+L G  G SNA +I+  +G    I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPGVIVERAKSM 509

Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
           +         H  + +   L ++R+  E+       Q   A S+H E+   Y++   E +
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-R 563

Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIA 646
           D   + A  KA         ++ A+ + D +++     QL +    + N LI    +A  
Sbjct: 564 DAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613

Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
           A+ + H+  P     +            G++V V S  D+  T++E   D     VQ G 
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671

Query: 705 MRVRVKKNNIRPIPNSKRKNAANP 728
           ++++V  + +  I  SK+  A  P
Sbjct: 672 LKMKVPTDELEKIKPSKQSAAQRP 695


>gi|299536893|ref|ZP_07050200.1| DNA mismatch repair protein [Lysinibacillus fusiformis ZC1]
 gi|298727717|gb|EFI68285.1| DNA mismatch repair protein [Lysinibacillus fusiformis ZC1]
          Length = 634

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 159/513 (30%), Positives = 251/513 (48%), Gaps = 53/513 (10%)

Query: 24  LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    + +I  I+     G LL PSE+ ++   LR   N+ KK 
Sbjct: 47  LNETTEARAILDAEGHVPFLGVSNIEHIMTKLEKGMLLDPSELVSISDFLRGCRNI-KKF 105

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
                     L  Y+  +   KN      +EE+I F I      +   AS +L+ IR   
Sbjct: 106 MLDKTFFAPVLSSYAHSMAEFKN------VEEEINFAIKANR--VDSAASRELKRIRHHM 157

Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
           +   + +   L K          I +  I+++  R  + IKA++K  +  G  + +SS G
Sbjct: 158 ETTEDKIKERLTKFLNNSANKPYIQEFFISQKDDRYTIPIKATYKNHV-QGTVVEISSKG 216

Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
           AT FMEP    + N     L   E  EE  IL+ L+  + +    I   M+ + + D+ F
Sbjct: 217 ATVFMEPSVIAKLNVELATLKAEEAVEEYQILASLSGLLMEHLHAITINMELISQYDMVF 276

Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
           A+A F++ + G  P ++   ++       I G KHPLL                P     
Sbjct: 277 AKAKFSRQIGGREPRINDYGYIQL-----ING-KHPLL----------------P----- 309

Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
           EN+               VP+   +  + R ++ITGPN GGKT  +KT+GL +L + +G 
Sbjct: 310 ENA---------------VPLQFSIAKDYRSLIITGPNAGGKTVVLKTIGLLTLATMSGF 354

Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
           ++ A     +  FD I  DIGD+QS+E  LSTFS H+  + DI+   +  +L+L DEIGS
Sbjct: 355 HIVADEGTEMAVFDHIFVDIGDNQSIENALSTFSSHMKNLSDIMRAANNHTLLLFDEIGS 414

Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
           GT+P+EG ALA +IL+       + V TTHY ++    +    F NAA  F  ETL P Y
Sbjct: 415 GTEPNEGAALAIAILEEFYQMGCITVATTHYGEIKRFSEMHPDFMNAAMRFHAETLEPLY 474

Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ++L G++G+SNAL I+K +     ++QRA+  +
Sbjct: 475 QLLIGTSGESNALWISKKMNVRETVLQRAKDYI 507


>gi|408411562|ref|ZP_11182705.1| MutS2 protein [Lactobacillus sp. 66c]
 gi|407874274|emb|CCK84511.1| MutS2 protein [Lactobacillus sp. 66c]
          Length = 788

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 191/627 (30%), Positives = 300/627 (47%), Gaps = 117/627 (18%)

Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
           +LD AS  L  +R +R  N     E +++  +   +Q      + + ++T R  R  + +
Sbjct: 149 VLDTASAALASLRHDRLANETEIKEKMNAYTRGKMSQY-----LSEAVVTIRDDRYVIPV 203

Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
           K  ++Y    G+  + S+SG T F+EP+  +  NN    L   E  E   IL  L+    
Sbjct: 204 KQEYRYKFG-GVVHDQSASGQTLFVEPEAILVLNNRLQNLLAEERQEIHRILHDLSLAAG 262

Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
           +    I+ +   + ++D   A+A  A+ M       +SQ  ++ D S+ +   +HPL+  
Sbjct: 263 EERETIQLVAGALSQLDFLSAKAKLAKKMR------ASQPAITTDQSVKLLAARHPLI-- 314

Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
                        +P K                     V  DI +  +   V+ITGPNTG
Sbjct: 315 -------------DPAKV--------------------VANDICLGQDFDTVLITGPNTG 341

Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
           GKT ++KTLGL SLM+++GL++PA    ++  FD I ADIGD QS+EQ+LSTFS HI+ I
Sbjct: 342 GKTITLKTLGLLSLMAQSGLFIPAAEGSQVAIFDQIFADIGDEQSIEQSLSTFSSHITDI 401

Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
           V I++ V+ +SLVLIDEIG+GTDP EG +LA SIL + R +    +VTTHY +L      
Sbjct: 402 VAIMKKVTSKSLVLIDEIGAGTDPEEGASLAISILDFFRKKQAKIMVTTHYPELKLYGYS 461

Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
             R  NA+ EF ++TL PTYR+  G  G SNA  IA+ +G    ++  A+KL+     + 
Sbjct: 462 RERTTNASMEFDMKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVLDAEKLMSDDDSD- 520

Query: 543 QQHRKSELYQSL---MEERRKLESQARTAASLHAEI---MDLYREIEDEAKDLDRRAAHL 596
             H   EL +      E R+KL+S    A +L  ++   +D+Y                 
Sbjct: 521 INHMIDELNKQTKLATENRQKLQSSLDRAKNLEKQLRDALDIY----------------- 563

Query: 597 KAKETQQVQQELNFA-----------KVQIDTVVQDF-----------ENQLRDASADEI 634
                Q+VQ++L+FA           + + D ++ D            ENQL DA   E 
Sbjct: 564 ----NQRVQKQLDFAQERANEIVAKKRKKADKIIADLEEARKNGANIKENQLMDAKG-EF 618

Query: 635 NSLIK-ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 693
           N L K E+  A   +++  +     +V            G++V V S G +  TV +  G
Sbjct: 619 NQLAKQEANLAKNKVLQKEKKRHHVAV------------GDKVKVLSYG-QTGTVTKKLG 665

Query: 694 DDDTVLVQYGKMRVRVKKNNIRPIPNS 720
           D +   V  G+++++V   +I  +  S
Sbjct: 666 DHEYE-VALGRIKLKVSDRDIDKLAAS 691


>gi|229031146|ref|ZP_04187156.1| DNA mismatch repair protein [Bacillus cereus AH1271]
 gi|228730185|gb|EEL81155.1| DNA mismatch repair protein [Bacillus cereus AH1271]
          Length = 633

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 265/520 (50%), Gaps = 67/520 (12%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P E+ +V   LR    + K +
Sbjct: 47  LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVADFLRGCRKIKKFM 106

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
            +         + ++P+L    N   +TE   +EE+I F I      I   AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154

Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
                N++++D  +K+   +   +      I +  I+K+  R  + IK+S+K  +   I 
Sbjct: 155 ----NNIDSIDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           +  S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            + D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G +           
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKA----------- 312

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP+  ++    R ++ITGPN GGKT  +KT+GL +
Sbjct: 313 -------------------------VPLHFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           L + +GL++       +  F+ +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG ALA SIL+       + V +THY ++    +    F NAA +F+ 
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y+++ G +G+SNAL IA  +    +++QRA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLQRAKEYM 507


>gi|116514507|ref|YP_813413.1| MutS family ATPase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116093822|gb|ABJ58975.1| MutS family ATPase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
          Length = 787

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 198/618 (32%), Positives = 302/618 (48%), Gaps = 89/618 (14%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
           +LD AS DL  +R  R   +     + +K+ A      G  + + ++T R  R  + +K 
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMIAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204

Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
            ++Y    G+  + S+SG T F+EP   +  NN   RL N  +AEE   +  +  E++  
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259

Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
            RE    IK +   + E+D   A+A  A+ M    P LS+      D S  + G +HPL+
Sbjct: 260 AREEMETIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313

Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
                          +P                    D  V  DI +  +   ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338

Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
           TGGKT ++KT GL  LM+++GL++PA     +  FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398

Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
            IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R +    +VTTHY +L    
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 458

Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
               R  NA+ EF ++TL PTYR+  G  G SNA  IA+ +G    ++  A+KL+     
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 518

Query: 541 ERQQHRKSELYQSL---MEERRKLESQARTAASLHAEI---MDLYREIEDEAKD--LDR- 591
           +   H   EL +      E ++KL++    A  L  ++   +D+Y +   +  D  LDR 
Sbjct: 519 DI-NHMIDELNKQTKLATENKQKLQTSLDRAKQLEKKLQDALDIYNQRVQKQLDFALDRA 577

Query: 592 -RAAHLKAKETQQVQQELNFAK---VQIDTVVQDFENQLRDASADEINSLIKESESAIAA 647
                 K K+  ++  EL  A+   +Q+ T      NQL DA   E N L K+ E  +A 
Sbjct: 578 NEIVSKKRKKADKIIAELEEARKEGMQVKT------NQLMDAKG-EFNQLAKQ-EVNLAK 629

Query: 648 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
                       V +        Q G++V V S G +  TV +  G+ D   V  G++++
Sbjct: 630 ----------NKVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHDYE-VSLGRIKL 677

Query: 708 RVKKNNIRPIPNSKRKNA 725
           +V   +I  +   +++ A
Sbjct: 678 KVTDRDIDKLAAGQKQQA 695


>gi|423083945|ref|ZP_17072473.1| MutS domain V protein [Clostridium difficile 002-P50-2011]
 gi|423087356|ref|ZP_17075744.1| MutS domain V protein [Clostridium difficile 050-P50-2011]
 gi|357543743|gb|EHJ25758.1| MutS domain V protein [Clostridium difficile 002-P50-2011]
 gi|357544774|gb|EHJ26761.1| MutS domain V protein [Clostridium difficile 050-P50-2011]
          Length = 636

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 157/520 (30%), Positives = 249/520 (47%), Gaps = 62/520 (11%)

Query: 21  QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
           +KL     A   +  S  + L  + +    ++    G ++ P E+  +   LR    +  
Sbjct: 45  RKLAENKEARKIIENSNHIPLEGLFNAGSTIDKIEKGMIIEPIELVNIEDFLRGCRKMKA 104

Query: 81  KLTEAAELDGDSLQRYSPLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
            + E         + YSP L     N      +E++I +CI      +   AS++L+ +R
Sbjct: 105 FMLEK--------EFYSPTLSSYALNITECKSIEDEINYCIKSNK--VDSNASKELKKVR 154

Query: 140 AERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
               RN+E     +   L K          I + +I+KR  R  + IK+S+K  + +G  
Sbjct: 155 ----RNIEITEGKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEV-NGTI 209

Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
           L+ SS G T F+EP      +     L   E  EE  ILS LT  I +   +IK  ++ +
Sbjct: 210 LDTSSKGNTVFIEPISVSNLSTELTMLKADETIEEYKILSYLTELIFEKISQIKLNIEIL 269

Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
            E D+ FA+A ++Q + G+ P +++  ++       I+G KHPLL G +           
Sbjct: 270 SEYDMVFAKAKYSQKIKGITPKINNNGYIKI-----IKG-KHPLLTGDA----------- 312

Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
                                    VP+D ++    R ++ITGPN GGKT ++KT+GL +
Sbjct: 313 -------------------------VPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLT 347

Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
           LM + G  + AK       F+ +  DIGD+QS+E  LSTFS HI  I +I+ L +  +LV
Sbjct: 348 LMVQCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMSLSNNSTLV 407

Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
           L DEIGSGT+P+EG  LA S+L+       + + +THY ++         FENA   F  
Sbjct: 408 LFDEIGSGTEPNEGAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDK 467

Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
           ETL P Y++  G + DSNAL I+K +G   +++ RA++ V
Sbjct: 468 ETLEPLYKLTIGKSEDSNALFISKKMGIKNRVLDRAKEYV 507


>gi|423599206|ref|ZP_17575206.1| MutS2 family protein [Bacillus cereus VD078]
 gi|401236190|gb|EJR42656.1| MutS2 family protein [Bacillus cereus VD078]
          Length = 633

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 160/556 (28%), Positives = 277/556 (49%), Gaps = 74/556 (13%)

Query: 24  LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
           LN+T+ A A++ ++  +    I +IA  +     G +L P+E+ +V   LR    + KK 
Sbjct: 47  LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKI-KKF 105

Query: 83  TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
               E     L  Y+  +   K+      +EE+I F I      I   AS++L+ IR   
Sbjct: 106 MLDKEFFAPVLSSYANSMSEFKS------IEEEINFSIKGNG--IDAAASKELKRIR--- 154

Query: 143 KRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
             N++++D  +K+   +   +      I +  I+K+  R  + IK+++K  +   I +  
Sbjct: 155 -NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSTYKNQVAGSI-VEA 212

Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
           S+ G+T F+EP    + N     L   E  EE  IL+ L+  + ++   IK  M+ + + 
Sbjct: 213 SAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVLENIYHIKINMELISQY 272

Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
           D+ FA+A F++ +DG+ P L+   +      I++   KHPLL G                
Sbjct: 273 DMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGK--------------- 311

Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
                                 VP++ ++    R ++ITGPN GGKT  +KT+GL +L +
Sbjct: 312 ---------------------IVPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLTLAT 350

Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
            +GL++       +  FD +  DIGD+QS+E  LSTFS H+  + +I+ + +  +L+L D
Sbjct: 351 MSGLHIAGDKETEIAIFDNVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLLLFD 410

Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
           EIGSGT+P+EG ALA SIL+       + + +THY ++    +    F NAA +F+ ETL
Sbjct: 411 EIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHGDFMNAAMQFNSETL 470

Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERL------RPERQQH 545
            P Y+++ G +G+SNAL IA  +     ++QRA++        +E++      +P+  Q 
Sbjct: 471 EPLYKLVIGKSGESNALWIANKMNVREHVLQRAKEYMGNKEYAIEKVNESKIRKPKMVQE 530

Query: 546 RKSELYQSLMEERRKL 561
           ++   Y+  + +R KL
Sbjct: 531 KRENDYEYKIGDRVKL 546


>gi|350567081|ref|ZP_08935686.1| DNA mismatch repair protein MutS [Peptoniphilus indolicus ATCC
           29427]
 gi|348659744|gb|EGY76471.1| DNA mismatch repair protein MutS [Peptoniphilus indolicus ATCC
           29427]
          Length = 766

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 180/602 (29%), Positives = 303/602 (50%), Gaps = 63/602 (10%)

Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG-IDKPLITKRRSRMCVGIKAS 185
           I D AS+ L  IR +  +     DS+ +++++ I      +   ++T R  R  + +K  
Sbjct: 148 IADSASQKLSSIRRQISKKK---DSIRERLSSMISSGSEYLQDAIVTIREGRYVIPVKNE 204

Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
           HK  +  GI  +VSSS  T ++EP   V  NN    L   E  E   IL  +++ +    
Sbjct: 205 HKSKVK-GIVHDVSSSKQTVYIEPLAVVNINNELRSLEVEEREEIERILQEISSRVDDVR 263

Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
            EI    D + EID  FA+   +   DG  PI++ + +V      N++  +HPLL    +
Sbjct: 264 HEILLNQDLLREIDFIFAKGKLSLEYDGRKPIINDKGYV------NLKSARHPLLDKKKV 317

Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
                                              VPIDI +  E   ++ITGPNTGGKT
Sbjct: 318 -----------------------------------VPIDISLGGEFTSLIITGPNTGGKT 342

Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
            S+KTLGL +LM++ GL++P   +  +  FD +LADIGD QS+EQ+LSTFS H+  IV+I
Sbjct: 343 VSIKTLGLLTLMAQYGLHIPTMENSEIAIFDKVLADIGDEQSIEQSLSTFSSHMVNIVEI 402

Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
           L+ ++ +SLV+ DE+G+GTDP+EG ALA SI+ ++  R    + TTHY  L         
Sbjct: 403 LKEITPKSLVIFDELGAGTDPTEGAALARSIMDFMLRRKIRCISTTHYNQLKLYALSTDG 462

Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
            +NA+ EF+++TL PTY++L G  G SNA  I++ +G    II+ A+K++     E +  
Sbjct: 463 VQNASMEFNVDTLSPTYKLLIGVPGKSNAFEISRKLGLPDIIIRDAKKMISEDNIEFE-- 520

Query: 546 RKSELYQSLMEERRKLE--SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
              E+  S+ ++R ++E   QA    SL  +  +   + E E  + +R     KA+E  +
Sbjct: 521 ---EVLSSIEKDRTRIEEYKQAAEIESLEYKKKNEKLKKEIEKLNQEREKVLEKARE--E 575

Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
             + +   +  ++ V+ +  ++LR+         ++E++       ++ +  ++F + + 
Sbjct: 576 ANRLVLTTRENMELVINEL-SELREQMNSAQARKLQEAQDLYRESFKSAQKKNEFVLEKA 634

Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
           +      + GE V   SL  +   V+E+P   + VL+Q G +++++      P+    R 
Sbjct: 635 DEVIGELKVGETVRSTSLNSE-GVVLELPDSKNQVLLQMGMLKMKL------PLDTLIRT 687

Query: 724 NA 725
           NA
Sbjct: 688 NA 689


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.315    0.131    0.360 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,352,391,873
Number of Sequences: 23463169
Number of extensions: 410474643
Number of successful extensions: 1719782
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8765
Number of HSP's successfully gapped in prelim test: 2896
Number of HSP's that attempted gapping in prelim test: 1691446
Number of HSP's gapped (non-prelim): 18633
length of query: 742
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 592
effective length of database: 8,839,720,017
effective search space: 5233114250064
effective search space used: 5233114250064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)