BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004612
(742 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BMD7|MORC4_MOUSE MORC family CW-type zinc finger protein 4 OS=Mus musculus GN=Morc4
PE=2 SV=2
Length = 928
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 220/419 (52%), Gaps = 40/419 (9%)
Query: 138 VHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGG 197
+ P++L SN++SH A AELLDN++D + T ID+ +K L D+G
Sbjct: 35 MSPRYLQSNSSSHTRPFSAIAELLDNAVDPDVSARTVF-IDVEEVKKKPC--LTFTDDGC 91
Query: 198 GMNPDKMRHCMSLGYSAK--SKAANTIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPT 255
GM P K+ +S G++ K K+ IG +GNGFK+ +MRLG D +VF+ K+G T
Sbjct: 92 GMTPHKLHRMLSFGFTDKVIKKSQRPIGVFGNGFKSGSMRLGKDALVFT----KNGN--T 145
Query: 256 RSIGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDDWNRNVETIVQWSPFSSE 315
++GLLS T+L + ++VP++ + SQQ K I+ +D ++E I+ +S F+ E
Sbjct: 146 LAVGLLSQTYLECIQAQAVIVPIVPF--SQQNKKMIV---TEDSLPSLEAILNYSIFNCE 200
Query: 316 ADLLHQFNLMK-DHGTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRDEQNIK-MAQH 373
DLL QF+ + GTR++I+N+ + G ELDFD+D++DI + + +E+ I +
Sbjct: 201 KDLLSQFDAIPGKKGTRVLIWNIRRNKDGKSELDFDTDQYDILVSDFDAEEKEIGGVTSE 260
Query: 374 YPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNIVNDMMLSKKVTYRPQPG 433
P + + SLR++ SILY++ P +I +R K V I + + Y+P
Sbjct: 261 LPETEY------SLRAFCSILYMK--PRMKIFLRQKKVTTQMIAKSLANVEYDIYKP--- 309
Query: 434 ASGIPTDLHMAVDVTIGFVKDAKHHIDVQGFNVYHKNRLIKPFWRL---WNASGSDGRGV 490
T + V +T GF K+H G +YH NRLIK F + + +G GV
Sbjct: 310 -----TSTNKQVRITFGF--SCKYHNQF-GVMMYHNNRLIKAFEKAGCQLKPTCGEGVGV 361
Query: 491 IGVLEANFVEPAHDKQGFERTTVLARLEARLIQMQKDYWNNNCHEIGYAPRRYKKYIKD 549
IGV+E NF++PA++KQ FE T L + YW + + P + I D
Sbjct: 362 IGVIECNFLKPAYNKQDFEYTKEYRLTINALARKLNAYWKEKISQENFEPLPTSRRIPD 420
>sp|Q14149|MORC3_HUMAN MORC family CW-type zinc finger protein 3 OS=Homo sapiens GN=MORC3
PE=1 SV=3
Length = 939
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 211/406 (51%), Gaps = 53/406 (13%)
Query: 140 PKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGM 199
PKFLH+N+TSH W A AEL+DN+ D N +IN L DNG GM
Sbjct: 16 PKFLHTNSTSHTWPFSAVAELIDNAYDPDVNAKQIWIDKTVIN---DHICLTFTDNGNGM 72
Query: 200 NPDKMRHCMSLGYSAKSKAAN--TIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRS 257
DK+ +S G+S K +G YGNGFK+ +MRLG D IVF+ K+G+S S
Sbjct: 73 TSDKLHKMLSFGFSDKVTMNGHVPVGLYGNGFKSGSMRLGKDAIVFT----KNGES--MS 126
Query: 258 IGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDDWNRNVETIVQWSPFSSEAD 317
+GLLS T+L E +VVP++ + +Q +L + ++ I++ S FS+E
Sbjct: 127 VGLLSQTYLEVIKAEHVVVPIVAFNKHRQ------MINLAESKASLAAILEHSLFSTEQK 180
Query: 318 LLHQFN-LMKDHGTRIIIYNLWEDDQGLLELDFDSDKHDIQL----------RGVNRDEQ 366
LL + + ++ GTRIII+NL + E DF+ DK+DI++ +G + E
Sbjct: 181 LLAELDAIIGKKGTRIIIWNL-RSYKNATEFDFEKDKYDIRIPEDLDEITGKKGYKKQE- 238
Query: 367 NIKMAQHYPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNIVNDMMLSKKV 426
+M Q P S +SLR+Y SILYL+ P +II+RG+ V+ + + ++
Sbjct: 239 --RMDQIAPES------DYSLRAYCSILYLK--PRMQIILRGQKVKTQLVSKSLAYIERD 288
Query: 427 TYRPQPGASGIPTDLHMAVDVTIGFVKDAKHHIDVQGFNVYHKNRLIKPFWRLWNA--SG 484
YRP+ L V +T GF K H G +YH+NRLIK + ++ +
Sbjct: 289 VYRPKF--------LSKTVRITFGFNCRNKDHY---GIMMYHRNRLIKAYEKVGCQLRAN 337
Query: 485 SDGRGVIGVLEANFVEPAHDKQGFERTTVLARLEARLIQMQKDYWN 530
+ G GV+G++E NF++P H+KQ F+ T L + DYWN
Sbjct: 338 NMGVGVVGIIECNFLKPTHNKQDFDYTNEYRLTITALGEKLNDYWN 383
>sp|Q8TE76|MORC4_HUMAN MORC family CW-type zinc finger protein 4 OS=Homo sapiens GN=MORC4
PE=1 SV=2
Length = 937
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 220/416 (52%), Gaps = 44/416 (10%)
Query: 122 PSGGWEFSTGGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLD-EVCNGATYSNIDML 180
P GG + G+ + P++L SN++SH A AELLDN++D +V + +++ +
Sbjct: 21 PGGGPQ--AFGIRLSTMSPRYLQSNSSSHTRPFSAIAELLDNAVDPDVSARTVFIDVEEV 78
Query: 181 INRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAK--SKAANTIGQYGNGFKTSTMRLGA 238
N+ L D+G GM P K+ +S G++ K K+ IG +GNGFK+ +MRLG
Sbjct: 79 KNKS----CLTFTDDGCGMTPHKLHRMLSFGFTDKVIKKSQCPIGVFGNGFKSGSMRLGK 134
Query: 239 DVIVFSCCCGKDGKSPTRSIGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDD 298
D +VF+ K+G T ++GLLS T+L + ++VP++ + +QQ K II +D
Sbjct: 135 DALVFT----KNGG--TLTVGLLSQTYLECVQAQAVIVPIVPF--NQQNKKMII---TED 183
Query: 299 WNRNVETIVQWSPFSSEADLLHQFNLMK-DHGTRIIIYNLWEDDQGLLELDFDSDKHDIQ 357
++E I+ +S F+ E DLL QF+ + GTR++I+N+ + G ELDFD+D++DI
Sbjct: 184 SLPSLEAILNYSIFNRENDLLAQFDAIPGKKGTRVLIWNIRRNKNGKSELDFDTDQYDIL 243
Query: 358 LRGVNRDEQNIK-MAQHYPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNI 416
+ + +E+ + P + + SLR++ ILY++ P +I +R K V I
Sbjct: 244 VSDFDTEEKMTGGVTSELPETEY------SLRAFCGILYMK--PRMKIFLRQKKVTTQMI 295
Query: 417 VNDMMLSKKVTYRPQPGASGIPTDLHMAVDVTIGFVKDAKHHIDVQGFNVYHKNRLIKPF 476
+ + TY+P T + V +T GF + G +YH NRLIK F
Sbjct: 296 AKSLANVEYDTYKP--------TFTNKQVRITFGFSCKNSNQF---GIMMYHNNRLIKSF 344
Query: 477 WRL---WNASGSDGRGVIGVLEANFVEPAHDKQGFERTTVLARLEARLIQMQKDYW 529
++ + +G GVIGV+E NF++PA++KQ FE T L Q YW
Sbjct: 345 EKVGCQVKPTRGEGVGVIGVIECNFLKPAYNKQDFEYTKEYRLTINALAQKLNAYW 400
>sp|Q9WVL5|MORC1_MOUSE MORC family CW-type zinc finger protein 1 OS=Mus musculus GN=Morc1
PE=2 SV=1
Length = 950
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 200/477 (41%), Gaps = 106/477 (22%)
Query: 133 MDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSNIDMLINRK-DGSRMLL 191
+ ++H F+H+N+T+H + GA AELLDN+ D GA ++ + N G ML
Sbjct: 7 LQRAKLHLDFIHANSTTHSFLFGALAELLDNARD---AGAVRLDVFSVDNETLQGGFMLC 63
Query: 192 IEDNGGGMNPDKMRHCMSLGYSAKSKAA-NTIGQYGNGFKTSTMRLGADVIVFSCCCGKD 250
D+G GM+PD+ + G S K + IGQYGNG K+ +MR+G D I+F+
Sbjct: 64 FLDDGCGMSPDEASDVIYFGTSKKRLSTLKFIGQYGNGLKSGSMRIGKDCILFT------ 117
Query: 251 GKSPTRSIGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDD----WNRNVETI 306
K T + S TF G ++VVP+ W R S+ D + + I
Sbjct: 118 KKEETMTCLFFSQTFCEKEGLTEVVVPI-------PSWLTRTRESITDDPQKFFTELSII 170
Query: 307 VQWSPFSSEADLLHQFNLMKDH-GTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRDE 365
++SPF +EA+L+ QF+++ GT +IIYNL G ELD +DK DI +
Sbjct: 171 FKYSPFKTEAELMQQFDMIYGRCGTLLIIYNLKLLLSGEPELDVTTDKEDILM------- 223
Query: 366 QNIKMAQHYPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNIVNDMMLSKK 425
+ + P R F R+Y ++LY P +I I+ K V+ ++ + +K
Sbjct: 224 --AEAPEEIPERRSF-------RAYTAVLYFE--PRMKIFIQAKRVQTKHLCYSLYKPRK 272
Query: 426 VTYRPQPGASGIPTDLH-------------------------MAVDVTIGFVKDAKHHID 460
Y T++ +A+ T ++ A +D
Sbjct: 273 YQYTTSSFKGKFKTEVQKAEEAVKRAELLFKEVQAKVNQPDRIALSSTQDALQKALQDVD 332
Query: 461 VQ-------------------------------GFNVYHKNRLIKPFWRL---WNASGSD 486
+ G +Y NRLIK + ++
Sbjct: 333 TKHKSLRQKQRALRKARTLSLFFGVNTEDQHQAGMFIYSNNRLIKMYEKVGPQLKMKSLL 392
Query: 487 GRGVIGVLEANF--VEPAHDKQGFERTTVLARLEARLIQMQKDYWNNNCHEIGYAPR 541
G G+IG++ +EP+H+KQ F + + L+++ Y C +IG + R
Sbjct: 393 GAGIIGIVNIPLETMEPSHNKQEF----LNVQEYNHLLKVMGQYLIQYCKDIGISNR 445
>sp|Q9Y6X9|MORC2_HUMAN MORC family CW-type zinc finger protein 2 OS=Homo sapiens GN=MORC2
PE=1 SV=2
Length = 1032
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 150/291 (51%), Gaps = 35/291 (12%)
Query: 131 GGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSNIDMLINRKDGSR-- 188
++ ++ ++LH+N+T+H++ GA AEL+DN+ D A + ID+ R++ R
Sbjct: 7 SSLNRAQLTFEYLHTNSTTHEFLFGALAELVDNARD-----ADATRIDIYAERREDLRGG 61
Query: 189 -MLLIEDNGGGMNPDKMRHCMSLGYSAKSKAANT-IGQYGNGFKTSTMRLGADVIVFSCC 246
ML D+G GM+P + G SAK +T IGQYGNG K+ +MR+G D I+F+
Sbjct: 62 FMLCFLDDGAGMDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFILFT-- 119
Query: 247 CGKDGKSPTRSIGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDDWNRNVETI 306
K T + LS TF G ++++VP+ + +E + +++ + E I
Sbjct: 120 ----KKEDTMTCLFLSRTFHEEEGIDEVIVPLPTWNARTRE---PVTDNVEKFAIETELI 172
Query: 307 VQWSPFSSEADLLHQF-NLMKDHGTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRDE 365
++SPF +E +++ QF + D GT +II+NL D G ELD S+ DIQ
Sbjct: 173 YKYSPFRTEEEVMTQFMKIPGDSGTLVIIFNLKLMDNGEPELDIISNPRDIQ-------- 224
Query: 366 QNIKMAQHYPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNI 416
MA+ P R S R+YA++LY+ P RI I G V+ +
Sbjct: 225 ----MAETSPEGTK--PERRSFRAYAAVLYID--PRMRIFIHGHKVQTKRL 267
>sp|Q86VD1|MORC1_HUMAN MORC family CW-type zinc finger protein 1 OS=Homo sapiens GN=MORC1
PE=2 SV=2
Length = 984
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 204/485 (42%), Gaps = 112/485 (23%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSNIDMLINRK-DGSRML 190
+ ++ F+H+N+T+H + GA AELLDN+ D GA ++ + N K G ML
Sbjct: 7 ALQRAQLRLDFIHANSTTHSFLFGALAELLDNARDA---GAERLDVFSVDNEKLQGGFML 63
Query: 191 LIEDNGGGMNPDKMRHCMSLGYSAKSKAA-NTIGQYGNGFKTSTMRLGADVIVFSCCCGK 249
D+G GM+P++ + G S K + IGQYGNG K+ +MR+G D I+F+
Sbjct: 64 CFLDDGCGMSPEEASDIIYFGRSKKRLSTLKFIGQYGNGLKSGSMRIGKDFILFT----- 118
Query: 250 DGKSPTRSIGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDD----WNRNVET 305
K T + S TF ++VVPM W R S+ D + +
Sbjct: 119 -KKEETMTCVFFSQTFCEEESLSEVVVPM-------PSWLIRTRESVTDDPQKFAMELSI 170
Query: 306 IVQWSPFSSEADLLHQFNLMKDH-GTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRD 364
I ++SPF +EA+L+ QF+++ GT ++IYNL G ELD +DK DI + G D
Sbjct: 171 IYKYSPFKTEAELMQQFDVIYGKCGTLLVIYNLKLLLNGEPELDVKTDKEDILMAGALED 230
Query: 365 EQNIKMAQHYPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNIVNDMMLSK 424
+P R S R+Y S+LY P RI I+ K V+ ++ + +
Sbjct: 231 ---------FP-------ARWSFRAYTSVLYFN--PWMRIFIQAKRVKTKHLCYCLYRPR 272
Query: 425 KVTYRPQPGASGIPTDL---HMAVDVTIGFVKDAKHHI--------------------DV 461
K Y ++ AV + +K+A+ + DV
Sbjct: 273 KYLYVTSSFKGAFKDEVKKAEEAVKIAESILKEAQIKVNQCDRTSLSSAKDVLQRALEDV 332
Query: 462 Q-----------------------GFNV----------YHKNRLIKPFWRL---WNASGS 485
+ G NV Y NRLIK ++
Sbjct: 333 EAKQKNLKEKQRELKTARTLSLFYGVNVENRSQAGMFIYSNNRLIKMHEKVGSQLKLKSL 392
Query: 486 DGRGVIGVLEA--NFVEPAHDKQGF----ERTTVLARLEARLIQMQKDYWNNN------C 533
G GV+G++ +EP+H+KQ F E +L + L+Q KD NN C
Sbjct: 393 LGAGVVGIVNIPLEVMEPSHNKQEFLNVQEYNHLLKVMGQYLVQYCKDTGINNRNLTLFC 452
Query: 534 HEIGY 538
+E GY
Sbjct: 453 NEFGY 457
>sp|Q69ZX6|MOR2A_MOUSE MORC family CW-type zinc finger protein 2A OS=Mus musculus
GN=Morc2a PE=1 SV=2
Length = 1030
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 150/291 (51%), Gaps = 35/291 (12%)
Query: 131 GGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSNIDMLINRKDGSR-- 188
++ ++ ++LH+N+T+H++ GA AEL+DN+ D A + ID+ R++ R
Sbjct: 7 SSLNRAQLTFEYLHTNSTTHEFLFGALAELVDNARD-----ADATRIDIYAERREDLRGG 61
Query: 189 -MLLIEDNGGGMNPDKMRHCMSLGYSAKSKAANT-IGQYGNGFKTSTMRLGADVIVFSCC 246
ML D+G GM+P + G SAK +T IGQYGNG K+ +MR+G D I+F+
Sbjct: 62 FMLCFLDDGAGMDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFILFT-- 119
Query: 247 CGKDGKSPTRSIGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDDWNRNVETI 306
K T + LS TF G ++++VP+ + +E I +++ + E +
Sbjct: 120 ----KKEDTMTCLFLSRTFHEEEGIDEVIVPLPTWNARTRE---PITDNVEKFAIETELV 172
Query: 307 VQWSPFSSEADLLHQF-NLMKDHGTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRDE 365
++SPF +E +++QF + + GT +II+NL D G ELD S+ DIQ
Sbjct: 173 YKYSPFHTEEQVMNQFMKIPGNSGTLVIIFNLKLMDNGEPELDIISNPKDIQ-------- 224
Query: 366 QNIKMAQHYPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNI 416
MA+ P R S R+YA++LY+ P RI I G V+ +
Sbjct: 225 ----MAETSPEGTK--PERRSFRAYAAVLYID--PRMRIFIHGHKVQTKRL 267
>sp|Q8C5W4|MOR2B_MOUSE MORC family CW-type zinc finger protein 2B OS=Mus musculus
GN=Morc2b PE=2 SV=2
Length = 1022
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 154/292 (52%), Gaps = 35/292 (11%)
Query: 142 FLHSNATSHKWALGAFAELLDNSLDEVCNGATYSNIDMLINRKD---GSRMLLIEDNGGG 198
+LH+N+T+H + GA AEL+DN+ D A + ID+ +++ G ML DNG G
Sbjct: 18 YLHTNSTTHAFLFGALAELIDNARD-----ADATRIDIYAEKREDLQGGFMLCFLDNGVG 72
Query: 199 MNPDKMRHCMSLGYSAKSKAANT-IGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRS 257
M+P+ + + + G SAK +T IG+YGNG K+ +MR+G D I+F+ K T S
Sbjct: 73 MDPNDVINVIQFGKSAKRTPESTQIGRYGNGLKSGSMRIGKDFILFT------KKENTMS 126
Query: 258 IGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDDWNRNVETIVQWSPFSSEAD 317
LS TF G ++++VP+ + +E + +++ + E I ++SPF +E +
Sbjct: 127 CLFLSRTFHEEEGIDEVIVPLPTWNSQTRE---PVTDNMEKFAIETELIYKYSPFHTEEE 183
Query: 318 LLHQFNLMK-DHGTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRDEQNIKMAQHYPN 376
++ QF + GT ++I+NL D G ELD S+ DI++ ++ ++ +K
Sbjct: 184 VMTQFTKISGTSGTLVVIFNLKLTDNGEPELDVTSNPKDIRMAEIS--QEGVK------- 234
Query: 377 SRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNIVNDMMLSKKVTY 428
RHS +YA++LY+ P RI I G V+ + + +K T+
Sbjct: 235 -----PERHSFCAYAAVLYID--PRMRIFIHGHKVQTKKLCCCLYKPRKYTF 279
>sp|C0QSY6|MUTL_PERMH DNA mismatch repair protein MutL OS=Persephonella marina (strain
DSM 14350 / EX-H1) GN=mutL PE=3 SV=1
Length = 520
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 156 AFAELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAK 215
EL++N++D A ID+ I K G R++ + DNG G++PD M C+ ++K
Sbjct: 27 VLKELIENAID-----AGSDRIDIFIE-KGGKRLIQVVDNGEGIHPDDMLDCVKRYTTSK 80
Query: 216 SKAAN---TIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRSI---GLLSYTFLRST 269
+ + +I Y GF+ + + V FS + S + + G + +F +
Sbjct: 81 ISSEDDLYSISSY--GFRGEALYSISSVSKFSIVSRPEDLSVGKELYIEGGVFRSFTETG 138
Query: 270 GKEDIVVPMLDYEGSQQEWKKIIRSSLDDWNRNVETIVQWSPFSSEA--DLLHQ----FN 323
V + D + KK ++S ++ ++T + ++ +++ L H N
Sbjct: 139 APVGTKVRVKDIFFNTPVRKKFLKSERTEFVHCLKTFINYAVVNTDIHFRLYHNGRELMN 198
Query: 324 LMKDHGTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRDEQNIKMAQHYPNSRHFLT- 382
L + I Y E LLELD+ + I ++ DE+ K Y N R
Sbjct: 199 LPPSDLKKRITYIYPELSGRLLELDYTDETGRIY-GYISTDERFKKEGIVYVNKRPVKNR 257
Query: 383 -YRHSLRSYAS----ILYLRLPPGF 402
R ++S S +L++ LPP F
Sbjct: 258 ELRKIIKSLISEKFYVLFIELPPYF 282
>sp|P66939|PARE_STAAN DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain
N315) GN=parE PE=1 SV=1
Length = 663
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGM 199
IEDNG GM
Sbjct: 71 SIEDNGRGM 79
>sp|P66938|PARE_STAAM DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=parE PE=3 SV=1
Length = 663
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGM 199
IEDNG GM
Sbjct: 71 SIEDNGRGM 79
>sp|P0A0K9|PARE_STAAW DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain MW2)
GN=parE PE=3 SV=1
Length = 663
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGM 199
IEDNG GM
Sbjct: 71 SIEDNGRGM 79
>sp|P0C1S7|PARE_STAAU DNA topoisomerase 4 subunit B OS=Staphylococcus aureus GN=parE PE=3
SV=1
Length = 663
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGM 199
IEDNG GM
Sbjct: 71 SIEDNGRGM 79
>sp|Q5HG65|PARE_STAAC DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain COL)
GN=parE PE=3 SV=2
Length = 663
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGM 199
IEDNG GM
Sbjct: 71 SIEDNGRGM 79
>sp|Q2FYS5|PARE_STAA8 DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain NCTC
8325) GN=parE PE=3 SV=1
Length = 663
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGM 199
IEDNG GM
Sbjct: 71 SIEDNGRGM 79
>sp|Q6GH51|PARE_STAAR DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain
MRSA252) GN=parE PE=3 SV=2
Length = 663
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGM 199
IEDNG GM
Sbjct: 71 SIEDNGRGM 79
>sp|Q6G9K5|PARE_STAAS DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain
MSSA476) GN=parE PE=3 SV=2
Length = 663
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGM 199
IEDNG GM
Sbjct: 71 SIEDNGRGM 79
>sp|P58478|HTPG_RICCN Chaperone protein HtpG OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=htpG PE=3 SV=1
Length = 621
Score = 40.8 bits (94), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 46/104 (44%), Gaps = 17/104 (16%)
Query: 175 SNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKAAN-------------- 220
SN + + R ++I DNG GMN D + +LG A+S AN
Sbjct: 60 SNFKITVKVDKDHRQIIIRDNGIGMNKDDL--IENLGTIARSGTANFLKSLSGDSKKDNM 117
Query: 221 TIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRSIGLLSYT 264
IGQ+G GF +S M + V V S G+D S GL YT
Sbjct: 118 LIGQFGVGFYSSFM-VADKVTVTSRKAGEDKVHIWESDGLGEYT 160
>sp|A8F2Y0|HTPG_RICM5 Chaperone protein HtpG OS=Rickettsia massiliae (strain Mtu5)
GN=htpG PE=3 SV=1
Length = 623
Score = 40.0 bits (92), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 161 LDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKAAN 220
L S E+ G + I + +++ +G ++I DNG GMN D + +LG A+S AN
Sbjct: 50 LSQSNSELVAGDSNFKITVKVDKDNGQ--IIIRDNGIGMNKDDL--IENLGTIARSGTAN 105
Query: 221 --------------TIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRSIGLLSYT 264
IGQ+G GF +S M + V V S G+D S GL YT
Sbjct: 106 FLKSLSGDSKKDNMLIGQFGVGFYSSFM-VADKVTVTSRKAGEDKVHIWESDGLGEYT 162
>sp|A8GTZ5|HTPG_RICRS Chaperone protein HtpG OS=Rickettsia rickettsii (strain Sheila
Smith) GN=htpG PE=3 SV=1
Length = 621
Score = 39.7 bits (91), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 161 LDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKAAN 220
L S E+ G + I + +++ +G ++I DNG GMN D + +LG A+S AN
Sbjct: 48 LSQSNSELVAGDSNFKITVKVDKDNGQ--IIIRDNGIGMNKDDL--IENLGTIARSGTAN 103
Query: 221 --------------TIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRSIGLLSYT 264
IGQ+G GF +S M + V V S G+D S GL YT
Sbjct: 104 FLKSLSGDSKKDNMLIGQFGVGFYSSFM-VADKVTVTSRKAGEDKVHIWESDGLGEYT 160
>sp|B0BVI6|HTPG_RICRO Chaperone protein HtpG OS=Rickettsia rickettsii (strain Iowa)
GN=htpG PE=3 SV=1
Length = 621
Score = 39.7 bits (91), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 161 LDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKAAN 220
L S E+ G + I + +++ +G ++I DNG GMN D + +LG A+S AN
Sbjct: 48 LSQSNSELVAGDSNFKITVKVDKDNGQ--IIIRDNGIGMNKDDL--IENLGTIARSGTAN 103
Query: 221 --------------TIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRSIGLLSYT 264
IGQ+G GF +S M + V V S G+D S GL YT
Sbjct: 104 FLKSLSGDSKKDNMLIGQFGVGFYSSFM-VADKVTVTSRKAGEDKVHIWESDGLGEYT 160
>sp|Q97ZF0|TOP6B_SULSO Type 2 DNA topoisomerase 6 subunit B OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=top6B
PE=3 SV=1
Length = 530
Score = 39.7 bits (91), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLL---IEDNGGGMNPDKMRHCMS-LGYSA 214
EL++NSLD NI + I+ D SR + + DNG G+ P ++ + + YS+
Sbjct: 38 ELIENSLDATDVHGILPNIKITIDLIDESRQIYKVNVVDNGIGIPPQEVPNAFGRVLYSS 97
Query: 215 KSKAANTIGQYGNGFKTSTM 234
K T G YG G K + +
Sbjct: 98 KYVNRQTRGMYGLGVKAAVL 117
>sp|Q8PJX2|MUTL_XANAC DNA mismatch repair protein MutL OS=Xanthomonas axonopodis pv.
citri (strain 306) GN=mutL PE=3 SV=1
Length = 625
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKA 218
EL++N+LD GAT +I++ + G R++ I DNGGG+ PD++ +S ++K +
Sbjct: 29 ELVENALDA---GATRVDIEL---EEGGVRLIRIRDNGGGITPDELPLAVSRHATSKIAS 82
Query: 219 ANTIGQYGN-GFKTSTMRLGADVIVFSCCC 247
+ + GF+ + A V F+
Sbjct: 83 LDDLETVATLGFRGEALPSIASVSRFTLTS 112
>sp|C3NHT6|TOP6B_SULIN Type 2 DNA topoisomerase 6 subunit B OS=Sulfolobus islandicus
(strain Y.N.15.51 / Yellowstone #2) GN=top6B PE=3 SV=1
Length = 530
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLL---IEDNGGGMNPDKMRHCMS-LGYSA 214
EL++NSLD NI + I+ D +R + + DNG G+ P ++ + + YS+
Sbjct: 38 ELIENSLDATDVHGILPNIKITIDLIDEARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSS 97
Query: 215 KSKAANTIGQYGNGFKTSTM 234
K T G YG G K + +
Sbjct: 98 KYANRQTRGMYGLGVKAAVL 117
>sp|O05207|TOP6B_SULSH Type 2 DNA topoisomerase 6 subunit B OS=Sulfolobus shibatae
GN=top6B PE=1 SV=1
Length = 530
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLL---IEDNGGGMNPDKMRHCMS-LGYSA 214
EL++NSLD NI + I+ D +R + + DNG G+ P ++ + + YS+
Sbjct: 38 ELIENSLDATDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSS 97
Query: 215 KSKAANTIGQYGNGFKTSTM 234
K T G YG G K + +
Sbjct: 98 KYVNRQTRGMYGLGVKAAVL 117
>sp|C3NDW7|TOP6B_SULIY Type 2 DNA topoisomerase 6 subunit B OS=Sulfolobus islandicus
(strain Y.G.57.14 / Yellowstone #1) GN=top6B PE=3 SV=1
Length = 530
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLL---IEDNGGGMNPDKMRHCMS-LGYSA 214
EL++NSLD NI + I+ D +R + + DNG G+ P ++ + + YS+
Sbjct: 38 ELIENSLDATDVHGILPNIKITIDLIDEARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSS 97
Query: 215 KSKAANTIGQYGNGFKTSTM 234
K T G YG G K + +
Sbjct: 98 KYVNRQTRGMYGLGVKAAVL 117
>sp|C3MYN1|TOP6B_SULIM Type 2 DNA topoisomerase 6 subunit B OS=Sulfolobus islandicus
(strain M.14.25 / Kamchatka #1) GN=top6B PE=3 SV=1
Length = 530
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLL---IEDNGGGMNPDKMRHCMS-LGYSA 214
EL++NSLD NI + I+ D +R + + DNG G+ P ++ + + YS+
Sbjct: 38 ELIENSLDATDVHGILPNIKITIDLIDEARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSS 97
Query: 215 KSKAANTIGQYGNGFKTSTM 234
K T G YG G K + +
Sbjct: 98 KYVNRQTRGMYGLGVKAAVL 117
>sp|C3MPN7|TOP6B_SULIL Type 2 DNA topoisomerase 6 subunit B OS=Sulfolobus islandicus
(strain L.S.2.15 / Lassen #1) GN=top6B PE=3 SV=1
Length = 530
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLL---IEDNGGGMNPDKMRHCMS-LGYSA 214
EL++NSLD NI + I+ D +R + + DNG G+ P ++ + + YS+
Sbjct: 38 ELIENSLDATDVHGILPNIKITIDLIDEARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSS 97
Query: 215 KSKAANTIGQYGNGFKTSTM 234
K T G YG G K + +
Sbjct: 98 KYVNRQTRGMYGLGVKAAVL 117
>sp|C4KGX9|TOP6B_SULIK Type 2 DNA topoisomerase 6 subunit B OS=Sulfolobus islandicus
(strain M.16.4 / Kamchatka #3) GN=top6B PE=3 SV=1
Length = 530
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLL---IEDNGGGMNPDKMRHCMS-LGYSA 214
EL++NSLD NI + I+ D +R + + DNG G+ P ++ + + YS+
Sbjct: 38 ELIENSLDATDVHGILPNIKITIDLIDEARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSS 97
Query: 215 KSKAANTIGQYGNGFKTSTM 234
K T G YG G K + +
Sbjct: 98 KYVNRQTRGMYGLGVKAAVL 117
>sp|C3N5B3|TOP6B_SULIA Type 2 DNA topoisomerase 6 subunit B OS=Sulfolobus islandicus
(strain M.16.27) GN=top6B PE=3 SV=1
Length = 530
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLL---IEDNGGGMNPDKMRHCMS-LGYSA 214
EL++NSLD NI + I+ D +R + + DNG G+ P ++ + + YS+
Sbjct: 38 ELIENSLDATDVHGILPNIKITIDLIDEARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSS 97
Query: 215 KSKAANTIGQYGNGFKTSTM 234
K T G YG G K + +
Sbjct: 98 KYVNRQTRGMYGLGVKAAVL 117
>sp|Q8P8E4|MUTL_XANCP DNA mismatch repair protein MutL OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=mutL PE=3 SV=1
Length = 624
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKA 218
EL++N+LD GAT +ID+ + G R++ I DNGGG+ P+++ +S ++K +
Sbjct: 29 ELVENALDA---GATRVDIDL---EEGGVRLIRIRDNGGGIAPEELPLAVSRHATSKIAS 82
Query: 219 ANTIGQYGN-GFKTSTMRLGADVIVFSCCC 247
+ + GF+ + A V F+
Sbjct: 83 LDDLETVATLGFRGEALPSIASVSRFTLAS 112
>sp|B0RRZ8|MUTL_XANCB DNA mismatch repair protein MutL OS=Xanthomonas campestris pv.
campestris (strain B100) GN=mutL PE=3 SV=1
Length = 624
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKA 218
EL++N+LD GAT +ID+ + G R++ I DNGGG+ P+++ +S ++K +
Sbjct: 29 ELVENALDA---GATRVDIDL---EEGGVRLIRIRDNGGGIAPEELPLAVSRHATSKIAS 82
Query: 219 ANTIGQYGN-GFKTSTMRLGADVIVFSCCC 247
+ + GF+ + A V F+
Sbjct: 83 LDDLETVATLGFRGEALPSIASVSRFTLAS 112
>sp|Q4UVP3|MUTL_XANC8 DNA mismatch repair protein MutL OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=mutL PE=3 SV=1
Length = 624
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKA 218
EL++N+LD GAT +ID+ + G R++ I DNGGG+ P+++ +S ++K +
Sbjct: 29 ELVENALDA---GATRVDIDL---EEGGVRLIRIRDNGGGIAPEELPLAVSRHATSKIAS 82
Query: 219 ANTIGQYGN-GFKTSTMRLGADVIVFSCCC 247
+ + GF+ + A V F+
Sbjct: 83 LDDLETVATLGFRGEALPSIASVSRFTLAS 112
>sp|Q3BSD0|MUTL_XANC5 DNA mismatch repair protein MutL OS=Xanthomonas campestris pv.
vesicatoria (strain 85-10) GN=mutL PE=3 SV=1
Length = 625
Score = 38.1 bits (87), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKA 218
EL++N+LD GAT +I++ + G R++ I DNGGG+ PD++ +S ++K +
Sbjct: 29 ELVENALDA---GATRVDIEL---EEGGVRLIRIRDNGGGIAPDELPLAVSRHATSKIAS 82
Query: 219 ANTIGQYGN-GFKTSTMRLGADVIVFSCCC 247
+ + GF+ + A V F+
Sbjct: 83 LDDLETVATLGFRGEALPSIASVSRFTLTS 112
>sp|Q5GZ85|MUTL_XANOR DNA mismatch repair protein MutL OS=Xanthomonas oryzae pv. oryzae
(strain KACC10331 / KXO85) GN=mutL PE=3 SV=1
Length = 625
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKA 218
EL++N+LD GAT +I++ + G R++ I DNGGG+ PD++ +S ++K +
Sbjct: 29 ELVENALDA---GATRVDIEL---EEGGVRLIRIRDNGGGIAPDELPLAVSRHATSKIAS 82
Query: 219 ANTIGQYGN-GFKTSTMRLGADVIVFSCC 246
+ + GF+ + A V F+
Sbjct: 83 LDDLETVATLGFRGEALPSIASVSRFTLT 111
>sp|B2SHP8|MUTL_XANOP DNA mismatch repair protein MutL OS=Xanthomonas oryzae pv. oryzae
(strain PXO99A) GN=mutL PE=3 SV=1
Length = 625
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKA 218
EL++N+LD GAT +I++ + G R++ I DNGGG+ PD++ +S ++K +
Sbjct: 29 ELVENALDA---GATRVDIEL---EEGGVRLIRIRDNGGGIAPDELPLAVSRHATSKIAS 82
Query: 219 ANTIGQYGN-GFKTSTMRLGADVIVFSCC 246
+ + GF+ + A V F+
Sbjct: 83 LDDLETVATLGFRGEALPSIASVSRFTLT 111
>sp|Q2P295|MUTL_XANOM DNA mismatch repair protein MutL OS=Xanthomonas oryzae pv. oryzae
(strain MAFF 311018) GN=mutL PE=3 SV=1
Length = 625
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKA 218
EL++N+LD GAT +I++ + G R++ I DNGGG+ PD++ +S ++K +
Sbjct: 29 ELVENALDA---GATRVDIEL---EEGGVRLIRIRDNGGGIAPDELPLAVSRHATSKIAS 82
Query: 219 ANTIGQYGN-GFKTSTMRLGADVIVFSCC 246
+ + GF+ + A V F+
Sbjct: 83 LDDLETVATLGFRGEALPSIASVSRFTLT 111
>sp|A7MMA2|MUTL_CROS8 DNA mismatch repair protein MutL OS=Cronobacter sakazakii (strain
ATCC BAA-894) GN=mutL PE=3 SV=1
Length = 635
Score = 37.7 bits (86), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 8/62 (12%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKA 218
EL++NSLD GAT +ID+ + G++++ I DNG G+ D++ ++L A SK
Sbjct: 29 ELVENSLDA---GATRIDIDI---ERGGAKLIRIRDNGAGIKKDEL--ALALARHATSKI 80
Query: 219 AN 220
A+
Sbjct: 81 AS 82
>sp|Q2JZH2|HTPG_RHIEC Chaperone protein HtpG OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=htpG PE=3 SV=1
Length = 630
Score = 37.7 bits (86), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 31/122 (25%)
Query: 141 KFLHSNATSHKWALGAFA-ELLDNSLDEVCNGATYSNID------------MLINRKDGS 187
+ LH S G F EL+ N D C Y I+ +++ + S
Sbjct: 20 RLLHMMVHSVYSDKGVFLRELISNGAD-ACEKLRYEAIETPSLLAADAESRIMLRLDEES 78
Query: 188 RMLLIEDNGGGMNPDKMRHCMSLGYSAKS---------------KAANTIGQYGNGFKTS 232
R L++EDNG GM D+M +LG A+S + A IGQ+G GF +
Sbjct: 79 RQLVVEDNGIGMRRDEM--IEALGTIARSGTRAFMERIAENKAAEGAQFIGQFGVGFYSC 136
Query: 233 TM 234
M
Sbjct: 137 FM 138
>sp|A4YHK7|TOP6B_METS5 Type 2 DNA topoisomerase 6 subunit B OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=top6B PE=3 SV=1
Length = 531
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 156 AFAELLDNSLDEVCNGATYSNIDMLINRKDGSR---MLLIEDNGGGMNPDKMRHCMS-LG 211
A EL++N+LD +I ++I R + L +EDNG G+ P + +
Sbjct: 35 ALRELVENALDATDVHEILPSIKVIIERTSQEKEIYRLTVEDNGIGIPPHVVPDAFGRVL 94
Query: 212 YSAKSKAANTIGQYGNGFKTSTM 234
YS+K T G YG G K + +
Sbjct: 95 YSSKYVLRQTRGMYGLGVKAAVL 117
>sp|B5Y334|MUTL_KLEP3 DNA mismatch repair protein MutL OS=Klebsiella pneumoniae (strain
342) GN=mutL PE=3 SV=1
Length = 619
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 8/62 (12%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKA 218
EL++NSLD GAT +ID+ + G++++ I DNG G+ D++ ++L A SK
Sbjct: 29 ELVENSLDA---GATRIDIDI---ERGGAKLIRIRDNGSGIKKDEL--ALALARHATSKI 80
Query: 219 AN 220
A+
Sbjct: 81 AS 82
>sp|A6TH85|MUTL_KLEP7 DNA mismatch repair protein MutL OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578) GN=mutL PE=3
SV=1
Length = 619
Score = 37.7 bits (86), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 8/62 (12%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKA 218
EL++NSLD GAT +ID+ + G++++ I DNG G+ D++ ++L A SK
Sbjct: 29 ELVENSLDA---GATRIDIDI---ERGGAKLIRIRDNGSGIKKDEL--ALALARHATSKI 80
Query: 219 AN 220
A+
Sbjct: 81 AS 82
>sp|Q4UJV5|HTPG_RICFE Chaperone protein HtpG OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=htpG PE=3 SV=1
Length = 621
Score = 37.4 bits (85), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 19/117 (16%)
Query: 161 LDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKAAN 220
L S E+ +G + I + +++ G ++I DNG GMN D + +LG A+S AN
Sbjct: 48 LSQSNSELTSGDSNFKITVKVDKDKGQ--IIIRDNGIGMNKDDL--IENLGTIARSGTAN 103
Query: 221 --------------TIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRSIGLLSY 263
IGQ+G GF +S M + V V S G+D S GL Y
Sbjct: 104 FLKSLSGDSKKDNMLIGQFGVGFYSSFM-VADKVTVTSRKAGEDKVHVWESDGLGEY 159
>sp|C6DFJ9|MUTL_PECCP DNA mismatch repair protein MutL OS=Pectobacterium carotovorum
subsp. carotovorum (strain PC1) GN=mutL PE=3 SV=1
Length = 669
Score = 37.4 bits (85), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKA 218
EL++NSLD GAT +ID+ + G++++ I DNG G+ D++ ++L A SK
Sbjct: 29 ELVENSLDA---GATRIDIDI---ERGGAKLIRIRDNGSGIGKDEL--TLALARHATSKI 80
Query: 219 AN 220
A
Sbjct: 81 AT 82
>sp|Q6D065|MUTL_ERWCT DNA mismatch repair protein MutL OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=mutL
PE=3 SV=1
Length = 651
Score = 37.4 bits (85), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKA 218
EL++NSLD GAT +ID+ + G++++ I DNG G+ D++ ++L A SK
Sbjct: 29 ELVENSLDA---GATRIDIDI---ERGGAKLIRIRDNGSGIGKDEL--TLALARHATSKI 80
Query: 219 AN 220
A
Sbjct: 81 AT 82
>sp|Q07XW5|MUTL_SHEFN DNA mismatch repair protein MutL OS=Shewanella frigidimarina
(strain NCIMB 400) GN=mutL PE=3 SV=1
Length = 619
Score = 37.4 bits (85), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 8/60 (13%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKA 218
EL++NSLD GAT +ID+ K GS+++ I DNG G+ D++ ++L A SK
Sbjct: 29 ELVENSLDA---GATRVDIDI---DKGGSKLIRIRDNGAGIAKDEL--ALALSRHATSKV 80
>sp|A1SA23|MUTL_SHEAM DNA mismatch repair protein MutL OS=Shewanella amazonensis (strain
ATCC BAA-1098 / SB2B) GN=mutL PE=3 SV=1
Length = 650
Score = 37.0 bits (84), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSK 217
EL++NSLD GAT +ID+ K GS+++ I DNGGG+ K ++L A SK
Sbjct: 29 ELVENSLD---AGATRVDIDI---DKGGSKLIRIRDNGGGI--PKAELALALARHATSK 79
>sp|Q12J93|MUTL_SHEDO DNA mismatch repair protein MutL OS=Shewanella denitrificans
(strain OS217 / ATCC BAA-1090 / DSM 15013) GN=mutL PE=3
SV=1
Length = 665
Score = 37.0 bits (84), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 8/59 (13%)
Query: 159 ELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSK 217
EL++NSLD GAT +ID+ K GS+++ I DNG G+ D++ ++L A SK
Sbjct: 29 ELVENSLDA---GATRVDIDI---DKGGSKLIRIRDNGSGIPKDEL--ALALSRHATSK 79
>sp|A1KUP6|MUTL_NEIMF DNA mismatch repair protein MutL OS=Neisseria meningitidis
serogroup C / serotype 2a (strain ATCC 700532 / FAM18)
GN=mutL PE=3 SV=1
Length = 658
Score = 37.0 bits (84), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 156 AFAELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAK 215
A E+++NS+D GAT ++++ G R++ + DNGGG++PD + + ++K
Sbjct: 27 ALKEIVENSIDA---GATAIDVEL---AGGGIRLIRVSDNGGGIHPDDIELALHRHATSK 80
Query: 216 SKAANTIGQYGN-GFK 230
K N + + GF+
Sbjct: 81 IKTLNDLEHVASMGFR 96
>sp|B4RLX4|MUTL_NEIG2 DNA mismatch repair protein MutL OS=Neisseria gonorrhoeae (strain
NCCP11945) GN=mutL PE=3 SV=1
Length = 658
Score = 37.0 bits (84), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 156 AFAELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAK 215
A E+++NS+D GAT ++++ G R++ + DNGGG++PD + + ++K
Sbjct: 27 ALKEIVENSIDA---GATAVDVEL---EGGGIRLIRVGDNGGGIHPDDIELALHRHATSK 80
Query: 216 SKAANTIGQYGN-GFK 230
K N + + GF+
Sbjct: 81 IKTLNDLEHVASMGFR 96
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 298,495,775
Number of Sequences: 539616
Number of extensions: 13623993
Number of successful extensions: 36869
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 36719
Number of HSP's gapped (non-prelim): 215
length of query: 742
length of database: 191,569,459
effective HSP length: 125
effective length of query: 617
effective length of database: 124,117,459
effective search space: 76580472203
effective search space used: 76580472203
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 65 (29.6 bits)