Query 004612
Match_columns 742
No_of_seqs 288 out of 1596
Neff 4.4
Searched_HMMs 29240
Date Tue Mar 26 18:15:20 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004612.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1910-1914//hhsearch_pdb/004612hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1y4s_A Chaperone protein HTPG; 1.0 1 1 166.7 9.4 114 124-248 7-145 (559)
2 2ioq_A Chaperone protein HTPG; 1.0 1 1 166.0 7.8 114 124-248 7-145 (624)
3 2o1u_A Endoplasmin; GRP94, HSP 1.0 1 1 163.7 13.2 115 124-249 25-167 (666)
4 2cg9_A ATP-dependent molecular 1.0 1 1 153.0 6.5 115 124-249 6-143 (677)
5 3peh_A Endoplasmin homolog; st 1.0 1 1 150.3 3.7 116 123-249 25-164 (281)
6 3ied_A Heat shock protein; HSP 1.0 1 1 148.1 4.2 111 124-245 27-197 (272)
7 3nmq_A Heat shock protein HSP 1.0 1 1 148.1 3.3 115 124-249 19-156 (239)
8 1qy5_A Endoplasmin; GRP94, NEC 1.0 1 1 147.1 2.8 115 124-249 8-150 (269)
9 3o0i_A HSP90AA1 protein; HSP90 1.0 1 1 144.1 1.8 115 123-248 39-176 (256)
10 3t0h_A Heat shock protein HSP 1.0 1 1 141.2 2.2 114 124-248 12-148 (228)
No 1
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A
Probab=1.00 E-value=1 Score=166.71 Aligned_cols=114 Identities=26% Similarity=0.444 Sum_probs=91.4
Q ss_pred CCCCCCCCCCCEEEECCHHHHCCCCCCCCHHHHHHHHHCCCHHHHH-------------CCCCEEEEEEEECCCCCCEEE
Q ss_conf 9864467874113316022210013551899999885302013441-------------699413999997368994069
Q 004612 124 GGWEFSTGGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVC-------------NGATYSNIDMLINRKDGSRML 190 (742)
Q Consensus 124 ~~~~~~~~~l~~~~vhp~fLhSnsTsh~~~fsAIAELIDNSiDA~~-------------~~At~V~IdI~~~~~~g~~~L 190 (742)
..||+++.+|.++.+|..| ++...| |+|||+||+||.. ..+..+.|.|..+. +...|
T Consensus 7 ~~Fqaei~~Ll~ll~~~lY------sn~~if--LrELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~I~~d~--~~~~I 76 (559)
T 1y4s_A 7 RGFQSEVKQLLHLMIHSLY------SNKEIF--LRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDK--DKRTL 76 (559)
T ss_dssp EECCTTHHHHHHHHHHHTG------GGTTHH--HHHHHHHHHHHHHHHHHHHHHCGGGGCSCCCCCEEEEEET--TTTEE
T ss_pred EEEEECHHHHHHHHHHHCC------CCHHHH--HHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEEC--CCCEE
T ss_conf 2103039999999987437------984899--9999987998757677764268111267876479999968--98589
Q ss_pred EEEECCCCCCHHHHHHHHH-CCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
Q ss_conf 9998599999987976320-2534344-----------68766683134343211026894999952448
Q 004612 191 LIEDNGGGMNPDKMRHCMS-LGYSAKS-----------KAANTIGQYGNGFKTSTMRLGADVIVFSCCCG 248 (742)
Q Consensus 191 ~I~DNG~GMs~eeL~~~l~-~G~SsK~-----------~~~~~IGrfGiGlKsAsmsLG~~vtV~SK~~g 248 (742)
.|.|||+||++++|.+++. +|+|.+. .+...||+||+||++++| +|++|+|.||+.+
T Consensus 77 ~I~DnGiGMt~edl~~~l~tiA~Sg~~~f~e~l~~~~~~~~~~iG~fGvGfyS~f~-VadkV~V~Sr~~~ 145 (559)
T 1y4s_A 77 TISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFI-VADKVTVRTRAAG 145 (559)
T ss_dssp EEEECSSCCCHHHHHHHHSCCSCCCCCCTTCC--------CCCCSSCCCSGGGHHH-HEEEEEEEEECSS
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH-CCCEEEEEECCCC
T ss_conf 99989988899999999765515562778987411111354434888763565641-4576899975799
No 2
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A
Probab=1.00 E-value=1 Score=165.99 Aligned_cols=114 Identities=26% Similarity=0.444 Sum_probs=92.4
Q ss_pred CCCCCCCCCCCEEEECCHHHHCCCCCCCCHHHHHHHHHCCCHHHHH-------------CCCCEEEEEEEECCCCCCEEE
Q ss_conf 9864467874113316022210013551899999885302013441-------------699413999997368994069
Q 004612 124 GGWEFSTGGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVC-------------NGATYSNIDMLINRKDGSRML 190 (742)
Q Consensus 124 ~~~~~~~~~l~~~~vhp~fLhSnsTsh~~~fsAIAELIDNSiDA~~-------------~~At~V~IdI~~~~~~g~~~L 190 (742)
..||+++.+|.++.+|..| ++.+.| |+|||+||+||.. ..+..+.|.|..+. +...|
T Consensus 7 ~~Fqaei~~Ll~ll~~~lY------sn~~if--LrELIsNA~DA~~k~r~~~l~~~~~~~~a~~~~I~I~~d~--~~~~I 76 (624)
T 2ioq_A 7 RGFQSEVKQLLHLMIHSLY------SNKEIF--LRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDK--DKRTL 76 (624)
T ss_dssp --------CCHHHHHHHHS------SCTTHH--HHHHHHHHHHHHHHHHHHHHTSTTTTTTCCCCCEEEEEET--TTTEE
T ss_pred EEEEECHHHHHHHHHHHCC------CCHHHH--HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEC--CCCEE
T ss_conf 3204139999999987337------985799--9999997998656567764268100367887479999968--97489
Q ss_pred EEEECCCCCCHHHHHHHHH-CCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
Q ss_conf 9998599999987976320-2534344-----------68766683134343211026894999952448
Q 004612 191 LIEDNGGGMNPDKMRHCMS-LGYSAKS-----------KAANTIGQYGNGFKTSTMRLGADVIVFSCCCG 248 (742)
Q Consensus 191 ~I~DNG~GMs~eeL~~~l~-~G~SsK~-----------~~~~~IGrfGiGlKsAsmsLG~~vtV~SK~~g 248 (742)
.|.|||+||++++|.+++. +|+|.+. .+...||+||+||++++| ++++|+|.||+.+
T Consensus 77 ~I~DnGiGMt~edl~~~l~tiA~Sg~~~f~~~l~~~~~~~~~~iG~fGvGfyS~f~-VadkV~V~Sr~~~ 145 (624)
T 2ioq_A 77 TISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFI-VADKVTVRTRAAG 145 (624)
T ss_dssp EEEECSCCCCHHHHHHHHHHHCC---------------CCTTHHHHHHHHHHHHHH-HEEEEEEEEECTT
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH-CCCEEEEEECCCC
T ss_conf 99989989899999999876605561778987301111354445888843798970-5786999977899
No 3
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A
Probab=1.00 E-value=1 Score=163.71 Aligned_cols=115 Identities=21% Similarity=0.343 Sum_probs=93.3
Q ss_pred CCCCCCCCCCCEEEECCHHHHCCCCCCCCHHHHHHHHHCCCHHHHH-------------CCCCEEEEEEEECCCCCCEEE
Q ss_conf 9864467874113316022210013551899999885302013441-------------699413999997368994069
Q 004612 124 GGWEFSTGGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVC-------------NGATYSNIDMLINRKDGSRML 190 (742)
Q Consensus 124 ~~~~~~~~~l~~~~vhp~fLhSnsTsh~~~fsAIAELIDNSiDA~~-------------~~At~V~IdI~~~~~~g~~~L 190 (742)
..||+++.+|.++.++..| ++.++| |+|||+||+||.. ..+..+.|.|..+. +...|
T Consensus 25 ~~Fqaei~~Ll~li~~sLY------sn~eif--LRELIsNA~DA~dk~r~~~l~~~~~~~~a~~~~I~I~~d~--~~~~I 94 (666)
T 2o1u_A 25 FAFQAEVNRMMKLIINSLY------KNKEIF--LRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDK--EKNLL 94 (666)
T ss_dssp ---------CCSSSTTTTS------SSCTTH--HHHHHHHHHHHHHHHHHHTTSCTTSSSSCCCCCEEEEEET--TTTEE
T ss_pred EEHHHHHHHHHHHHHHHCC------CCCHHH--HHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEEC--CCCEE
T ss_conf 4257769999999887326------982398--9998756999999888874268021167876379999938--97789
Q ss_pred EEEECCCCCCHHHHHHHHH-CCCCCCC--------------CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 9998599999987976320-2534344--------------687666831343432110268949999524489
Q 004612 191 LIEDNGGGMNPDKMRHCMS-LGYSAKS--------------KAANTIGQYGNGFKTSTMRLGADVIVFSCCCGK 249 (742)
Q Consensus 191 ~I~DNG~GMs~eeL~~~l~-~G~SsK~--------------~~~~~IGrfGiGlKsAsmsLG~~vtV~SK~~g~ 249 (742)
.|.|||+||++++|.++|. +++|.+. .+...||+||+||++++ .+|++|+|.||+.+.
T Consensus 95 ~I~DnGiGMt~edl~~~l~tIA~SGtk~f~~kl~~~~~~~~~d~~~IGqFGvGfySaf-~vAdkV~V~Sr~~~~ 167 (666)
T 2o1u_A 95 HVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAF-LVADKVIVTSKHNND 167 (666)
T ss_dssp EEEECSCCCCHHHHHHHTTC-------------------------------CTTGGGG-GTEEEEEEEEECTTS
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHH-HHCCEEEEEEEECCC
T ss_conf 9998898989999999976552536288899864002355320554267880788598-755888999961897
No 4
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=153.04 Aligned_cols=115 Identities=20% Similarity=0.271 Sum_probs=93.5
Q ss_pred CCCCCCCCCCCEEEECCHHHHCCCCCCCCHHHHHHHHHCCCHHHHH-------------CCCCEEEEEEEECCCCCCEEE
Q ss_conf 9864467874113316022210013551899999885302013441-------------699413999997368994069
Q 004612 124 GGWEFSTGGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVC-------------NGATYSNIDMLINRKDGSRML 190 (742)
Q Consensus 124 ~~~~~~~~~l~~~~vhp~fLhSnsTsh~~~fsAIAELIDNSiDA~~-------------~~At~V~IdI~~~~~~g~~~L 190 (742)
..||+++.+|.++.+|..| +++.+| |+|||.||+||++ ..+..+.|.|..+. +...|
T Consensus 6 ~~Fqae~~~Ll~li~~sLY------snkeif--LRELIsNA~DA~~k~r~~~ltd~~~~~~~~~~~I~I~~d~--~~~~I 75 (677)
T 2cg9_A 6 FEFQAEITQLMSLIINTVY------SNKEIF--LRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKP--EQKVL 75 (677)
T ss_dssp EECCCCHHHHHHHHHHSCC------SCTTHH--HHHHHHHHHHHHHHHHHHTSSCTTTTTTCCCCCEEEEEEG--GGTEE
T ss_pred EEHHHHHHHHHHHHHHHCC------CCCHHH--HHHHHHCHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEC--CCCEE
T ss_conf 4331339999999887377------981587--9888538999999888875269132067877289999938--97889
Q ss_pred EEEECCCCCCHHHHHHHHH-CCCCCCC---------CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 9998599999987976320-2534344---------687666831343432110268949999524489
Q 004612 191 LIEDNGGGMNPDKMRHCMS-LGYSAKS---------KAANTIGQYGNGFKTSTMRLGADVIVFSCCCGK 249 (742)
Q Consensus 191 ~I~DNG~GMs~eeL~~~l~-~G~SsK~---------~~~~~IGrfGiGlKsAsmsLG~~vtV~SK~~g~ 249 (742)
.|.|||+||+.++|.++|. +++|.+. .+...||+||+||++|+| ++++|+|.||+.+.
T Consensus 76 ~I~DnGiGMt~edl~~~l~tIA~Sgt~~f~~kl~~~~d~~~IGqFGvGFySaf~-vadkV~V~Sk~~~~ 143 (677)
T 2cg9_A 76 EIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFL-VADRVQVISKSNDD 143 (677)
T ss_dssp EEEECSCCCCHHHHHGGGSSSSSCTTHHHHSCCCSSCCCCCCCCTTCTTGGGGG-TEEEEEEEEECTTS
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCCCHHHHHHH-CCCEEEEEECCCCC
T ss_conf 999789898999999998767035627788863122434441787712687751-57678999726998
No 5
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A*
Probab=1.00 E-value=1 Score=150.26 Aligned_cols=116 Identities=22% Similarity=0.352 Sum_probs=94.1
Q ss_pred CCCCCCCCCCCCEEEECCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHC-------------CCCEEEEEEEECCCCCCEE
Q ss_conf 998644678741133160222100135518999998853020134416-------------9941399999736899406
Q 004612 123 SGGWEFSTGGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCN-------------GATYSNIDMLINRKDGSRM 189 (742)
Q Consensus 123 ~~~~~~~~~~l~~~~vhp~fLhSnsTsh~~~fsAIAELIDNSiDA~~~-------------~At~V~IdI~~~~~~g~~~ 189 (742)
...||+++.+|..+.++..| +++++| |+|||+||+||+.. ....+.|.|..++ ....
T Consensus 25 ~~~Fqaei~~Ll~ll~~~lY------sn~~if--LRELIsNA~DA~~k~r~~~l~d~~~~~~~~~l~I~I~~d~--~~~t 94 (281)
T 3peh_A 25 SHQYQTEVTRLMDIIVNSLY------TQKEVF--LRELISNAADALEKIRFLSLSDESVLGEEKKLEIRISANK--EKNI 94 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHT------TCGGGH--HHHHHHHHHHHHHHHHHHHTTCGGGGTTCCCCCEEEEEET--TTTE
T ss_pred EEEEHHHHHHHHHHHHHHCC------CCHHHH--HHHHHHCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECC--CCCE
T ss_conf 46543889999999988614------880999--9999868687999999885278021168884499999828--9767
Q ss_pred EEEEECCCCCCHHHHHHHHH-CCCCCCC----------CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 99998599999987976320-2534344----------687666831343432110268949999524489
Q 004612 190 LLIEDNGGGMNPDKMRHCMS-LGYSAKS----------KAANTIGQYGNGFKTSTMRLGADVIVFSCCCGK 249 (742)
Q Consensus 190 L~I~DNG~GMs~eeL~~~l~-~G~SsK~----------~~~~~IGrfGiGlKsAsmsLG~~vtV~SK~~g~ 249 (742)
|.|.|||+||++++|.++|. +++|.+. .+...||+||+||++++| +|++|+|.||+.+.
T Consensus 95 LtI~DNGiGMt~edL~~~LgtIa~Sgtk~f~e~l~~~~~d~~~IGqFGVGFySaf~-vadkV~V~Sk~~~~ 164 (281)
T 3peh_A 95 LSITDTGIGMTKVDLINNLGTIAKSGTSNFLEAISKSGGDMSLIGQFGVGFYSAFL-VADKVIVYTKNNDD 164 (281)
T ss_dssp EEEEECSCCCCHHHHHHHHHHHHHSCHHHHHHHHHHTTCCSTTTTTTTCGGGGGGG-TEEEEEEEEECTTS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCC-CCCEEEEEEECCCC
T ss_conf 99994898989999999999987676563777642024551200455732010000-16879999940788
No 6
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum}
Probab=1.00 E-value=1 Score=148.14 Aligned_cols=111 Identities=23% Similarity=0.354 Sum_probs=93.2
Q ss_pred CCCCCCCCCCCEEEECCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHC---------------------------------
Q ss_conf 98644678741133160222100135518999998853020134416---------------------------------
Q 004612 124 GGWEFSTGGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCN--------------------------------- 170 (742)
Q Consensus 124 ~~~~~~~~~l~~~~vhp~fLhSnsTsh~~~fsAIAELIDNSiDA~~~--------------------------------- 170 (742)
..||+++.+|.++.+|..| +++.+| |+|||.||.||+..
T Consensus 27 ~~Fqae~~~ll~li~~slY------s~keiF--lRELISNasDA~dK~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (272)
T 3ied_A 27 YNFKAEVNKVMDIIVNSLY------TDKDVF--LRELISNASDACDKKRIILENNKLIKDAEVVTNEEIKNETEKEKTEN 98 (272)
T ss_dssp EECCHHHHHHHHHHHHCTT------CCTTHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------------
T ss_pred ECHHHHHHHHHHHHHHHCC------CCHHHH--HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 3158889999999986147------878999--99998726889999998613825420100011110012211123333
Q ss_pred ----------------CCCEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHH-CCCCCCC----------CCCCCCC
Q ss_conf ----------------994139999973689940699998599999987976320-2534344----------6876668
Q 004612 171 ----------------GATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMS-LGYSAKS----------KAANTIG 223 (742)
Q Consensus 171 ----------------~At~V~IdI~~~~~~g~~~L~I~DNG~GMs~eeL~~~l~-~G~SsK~----------~~~~~IG 223 (742)
....+.|.|..++ ....|.|.|||+||++++|.++|. +++|.+. .+...||
T Consensus 99 ~~~~~~~~~~~~e~~~~~~~l~I~I~~Dk--~~~tLtI~DNGiGMTkeeL~~~LgtIA~SGtk~Fle~l~~~~~d~~~IG 176 (272)
T 3ied_A 99 VNESTDKKENVEEEKNDIKKLIIKIKPDK--EKKTLTITDNGIGMDKSELINNLGTIAQSGTAKFLKQIEEGKADSNLIG 176 (272)
T ss_dssp ---------------CGGGGCCEEEEEET--TTTEEEEEECSCCCCHHHHHHHTTCSCCHHHHHHHHHHHTTSSCTTCGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEC--CCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
T ss_conf 33343211232112578887379999908--9988999838988899999999998860212557887421445533147
Q ss_pred CCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 3134343211026894999952
Q 004612 224 QYGNGFKTSTMRLGADVIVFSC 245 (742)
Q Consensus 224 rfGiGlKsAsmsLG~~vtV~SK 245 (742)
|||+||++++| +|++|+|.||
T Consensus 177 qFGVGFySaFm-VAdkV~V~Sk 197 (272)
T 3ied_A 177 QFGVGFYSSFL-VSNRVEVYTK 197 (272)
T ss_dssp GSCCGGGGGGG-TEEEEEEEEE
T ss_pred CCCCEEHEEEC-CCCEEEEEEC
T ss_conf 65600010000-5888999986
No 7
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1
Probab=1.00 E-value=1 Score=148.06 Aligned_cols=115 Identities=21% Similarity=0.339 Sum_probs=93.7
Q ss_pred CCCCCCCCCCCEEEECCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHC-------------CCCEEEEEEEECCCCCCEEE
Q ss_conf 98644678741133160222100135518999998853020134416-------------99413999997368994069
Q 004612 124 GGWEFSTGGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCN-------------GATYSNIDMLINRKDGSRML 190 (742)
Q Consensus 124 ~~~~~~~~~l~~~~vhp~fLhSnsTsh~~~fsAIAELIDNSiDA~~~-------------~At~V~IdI~~~~~~g~~~L 190 (742)
..||+++.+|..+.++..| +++++| |+|||.||.||++. ....+.|.|..++ ....|
T Consensus 19 ~~Fqae~~~ll~ll~~~lY------s~~~if--LRELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~I~~d~--~~~~L 88 (239)
T 3nmq_A 19 FAFQAEIAQLMSLIINTFY------SNKEIF--LRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNP--QERTL 88 (239)
T ss_dssp EECCHHHHHHHHHHHHSCC------CCTTHH--HHHHHHHHHHHHHHHHHHHHHCGGGGTTCCCCCEEEEEET--TTTEE
T ss_pred EEEHHHHHHHHHHHHHHCC------CCCHHH--HHHHHHCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEEEC--CCCEE
T ss_conf 7621669999999988646------980999--9999868687999888875068011168985699999818--96579
Q ss_pred EEEECCCCCCHHHHHHHH-HCCCCCCC---------CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 999859999998797632-02534344---------687666831343432110268949999524489
Q 004612 191 LIEDNGGGMNPDKMRHCM-SLGYSAKS---------KAANTIGQYGNGFKTSTMRLGADVIVFSCCCGK 249 (742)
Q Consensus 191 ~I~DNG~GMs~eeL~~~l-~~G~SsK~---------~~~~~IGrfGiGlKsAsmsLG~~vtV~SK~~g~ 249 (742)
.|.|||.||++++|.+++ .+++|.+. .+...||+||+||++++| +|++|+|.||+.+.
T Consensus 89 ~I~DnGiGMt~edL~~~LgtIA~Sgtk~f~e~~~~~~d~~~IGqFGvGfySaf~-vadkv~V~Sk~~~~ 156 (239)
T 3nmq_A 89 TLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYL-VAEKVVVITKHNDD 156 (239)
T ss_dssp EEEECSCCCCHHHHHTHHHHHHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTTS
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCEEEEEEEECCC
T ss_conf 999699897999999999888225324245552036774434666754020126-58878999940788
No 8
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A*
Probab=1.00 E-value=1 Score=147.07 Aligned_cols=115 Identities=21% Similarity=0.360 Sum_probs=92.2
Q ss_pred CCCCCCCCCCCEEEECCHHHHCCCCCCCCHHHHHHHHHCCCHHHHH-------------CCCCEEEEEEEECCCCCCEEE
Q ss_conf 9864467874113316022210013551899999885302013441-------------699413999997368994069
Q 004612 124 GGWEFSTGGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVC-------------NGATYSNIDMLINRKDGSRML 190 (742)
Q Consensus 124 ~~~~~~~~~l~~~~vhp~fLhSnsTsh~~~fsAIAELIDNSiDA~~-------------~~At~V~IdI~~~~~~g~~~L 190 (742)
..||+++.+|.++.++..| ++.++| |+|||+||+||++ .....+.|.|..+. +...|
T Consensus 8 ~~Fqaei~~Ll~li~~~lY------sn~eif--LrELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~i~~d~--~~~~l 77 (269)
T 1qy5_A 8 FAFQAEVNRMMKLIINSLY------KNKEIF--LRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDK--EKNLL 77 (269)
T ss_dssp ECCCHHHHHHHHHHHHHHT------TCTTHH--HHHHHHHHHHHHHHHHHHHHHCTTTTTTCCCCCEEEEEET--TTTEE
T ss_pred EEEHHHHHHHHHHHHHHCC------CCCHHH--HHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECC--CCEEE
T ss_conf 6631539999999988455------980599--9999999999887445553158111268971699999828--91399
Q ss_pred EEEECCCCCCHHHHHHHH-HCCCCCCC--------------CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 999859999998797632-02534344--------------687666831343432110268949999524489
Q 004612 191 LIEDNGGGMNPDKMRHCM-SLGYSAKS--------------KAANTIGQYGNGFKTSTMRLGADVIVFSCCCGK 249 (742)
Q Consensus 191 ~I~DNG~GMs~eeL~~~l-~~G~SsK~--------------~~~~~IGrfGiGlKsAsmsLG~~vtV~SK~~g~ 249 (742)
.|.|||+||++++|.++| .+|+|.+. .+...||+||+||++++| ++++|+|+||+.+.
T Consensus 78 ~I~DnGiGMt~edl~~~l~tia~Sgtk~F~~kl~~~~~~~~~d~~~IG~fGvGfySaf~-va~~v~V~Sk~~~~ 150 (269)
T 1qy5_A 78 HVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFL-VADKVIVTSKHNND 150 (269)
T ss_dssp EEEECSCCCCHHHHHHHHHSCCSHHHHHHHHHHHHHHHHTCCCHHHHHHTTCGGGGGGG-TEEEEEEEEECTTS
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHH-CCCEEEEEEEECCC
T ss_conf 99978888799999988644405453878776420013443441222776600888864-26669999995588
No 9
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A*
Probab=1.00 E-value=1 Score=144.11 Aligned_cols=115 Identities=22% Similarity=0.344 Sum_probs=93.3
Q ss_pred CCCCCCCCCCCCEEEECCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHC-------------CCCEEEEEEEECCCCCCEE
Q ss_conf 998644678741133160222100135518999998853020134416-------------9941399999736899406
Q 004612 123 SGGWEFSTGGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCN-------------GATYSNIDMLINRKDGSRM 189 (742)
Q Consensus 123 ~~~~~~~~~~l~~~~vhp~fLhSnsTsh~~~fsAIAELIDNSiDA~~~-------------~At~V~IdI~~~~~~g~~~ 189 (742)
...||+++.+|..+.++..| +++++| |+|||+||+||++. ....+.|.|..+. +...
T Consensus 39 ~~~Fqaei~~Ll~ll~~~lY------s~~~if--lRELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~I~~d~--~~~~ 108 (256)
T 3o0i_A 39 TFAFQAEIAQLMSLIINTFY------SNKEIF--LRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNK--QDRT 108 (256)
T ss_dssp EEECCHHHHHHHHHHHHSCC------SCTTHH--HHHHHHHHHHHHHHHHHHHHHCGGGGTTCCCCCEEEEEET--TTTE
T ss_pred EEEEEEEHHHHHHHHHHHCC------CCCHHH--HHHHHHCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECC--CCEE
T ss_conf 37767539999999998615------880999--9999868698999998886058121057885599999829--9107
Q ss_pred EEEEECCCCCCHHHHHHHH-HCCCCCCC---------CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
Q ss_conf 9999859999998797632-02534344---------68766683134343211026894999952448
Q 004612 190 LLIEDNGGGMNPDKMRHCM-SLGYSAKS---------KAANTIGQYGNGFKTSTMRLGADVIVFSCCCG 248 (742)
Q Consensus 190 L~I~DNG~GMs~eeL~~~l-~~G~SsK~---------~~~~~IGrfGiGlKsAsmsLG~~vtV~SK~~g 248 (742)
|.|.|||+||++++|..++ ++++|.+. .+...||+||+||+++++ ++++++|.||+.+
T Consensus 109 I~I~DnG~GMt~edl~~~l~~ia~S~~~~f~~~L~~~~~~~~iG~fG~Gf~S~f~-Vadkv~V~Sr~~~ 176 (256)
T 3o0i_A 109 LTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYL-VAEKVTVITKHND 176 (256)
T ss_dssp EEEEECSCCCCHHHHHTHHHHHHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTT
T ss_pred EEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHC-CCCEEEEEECCCC
T ss_conf 9996389896999999998755165440055663025786655877616788646-5886999975799
No 10
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ...
Probab=1.00 E-value=1 Score=141.17 Aligned_cols=114 Identities=22% Similarity=0.343 Sum_probs=91.4
Q ss_pred CCCCCCCCCCCEEEECCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHC-------------CCCEEEEEEEECCCCCCEEE
Q ss_conf 98644678741133160222100135518999998853020134416-------------99413999997368994069
Q 004612 124 GGWEFSTGGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCN-------------GATYSNIDMLINRKDGSRML 190 (742)
Q Consensus 124 ~~~~~~~~~l~~~~vhp~fLhSnsTsh~~~fsAIAELIDNSiDA~~~-------------~At~V~IdI~~~~~~g~~~L 190 (742)
..||+++.+|..+.++..| ++.+.| |+|||+||+||+.. ....+.|.|..+. +...|
T Consensus 12 ~~Fq~ei~~ll~ll~~~lY------s~~~~~--lrELi~NA~DA~~k~r~~~~~~~~~~~~~~~i~I~I~~d~--~~~~i 81 (228)
T 3t0h_A 12 FAFQAEIAQLMSLIINTFY------SNKEIF--LRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNK--QDRTL 81 (228)
T ss_dssp EECCHHHHHHHHHHHHSCC------SCTTHH--HHHHHHHHHHHHHHHHHHHTTCGGGGTTCCCCCEEEEEET--TTTEE
T ss_pred EEEEEEHHHHHHHHHHHHC------CCCHHH--HHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEC--CEEEE
T ss_conf 6888649989999998632------890999--9999878898999987664157301367886599999969--92279
Q ss_pred EEEECCCCCCHHHHHHHH-HCCCCCCC---------CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
Q ss_conf 999859999998797632-02534344---------68766683134343211026894999952448
Q 004612 191 LIEDNGGGMNPDKMRHCM-SLGYSAKS---------KAANTIGQYGNGFKTSTMRLGADVIVFSCCCG 248 (742)
Q Consensus 191 ~I~DNG~GMs~eeL~~~l-~~G~SsK~---------~~~~~IGrfGiGlKsAsmsLG~~vtV~SK~~g 248 (742)
.|.|||+||++++|..++ ++++|.+. .+...||+||+||+++++ ++++++|.||+.+
T Consensus 82 ~V~DnG~GMs~edl~~~l~~ia~S~~~~f~~~l~~~~~~~~iG~fG~G~~S~~~-vad~v~V~Sr~~~ 148 (228)
T 3t0h_A 82 TIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYL-VAEKVTVITKHND 148 (228)
T ss_dssp EEEECSCCCCHHHHHTGGGSCHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTT
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHC-CCCEEEEEEECCC
T ss_conf 998699897999999998756354322245553025776667987756899864-5787999984189
Done!