Your job contains 1 sequence.
>004613
MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSVDELDSYMYQTVGHQIIVSYA
ECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIASDY
QRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKEIA
FLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVGVL
HPLAFHLEYKAGSASLSGSRETENSIQEKTGLVFEVQGECPQNSEAMCLPVAEVTDSVEV
TDNRLNISRRKKDNTFSICCWLQETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYI
HLYISDMNEFAVANETYVKFITHEKCPCGVPSRSTIELPLLEVGLGKAYIEVLVANDQSK
RVLHVQSISCWAPSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNS
EAVAKCFNCSISTSAIYFVVYCSTYVASSERLKIQEKLDAFLKQMRVWHFEERSMSKVLD
PIFLFVLASNLPKSALVEIKPILYVTDDSETVSEIVQDLSCMKAPLHWGFQHADWHESCF
QKCVVHEKICAVILSITCEIAARICSESLDASQSKDCQTSQADGGMGRLSRFCIYLLNKI
IVENNFSWEDVTNLRLYFPTSLSMPMVTLSAIFSSAFDELAVMNPRMKIDGDSIFNLVPV
LGAGRSATMDDIITCELFAQKS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004613
(742 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2100910 - symbol:AT3G04480 "AT3G04480" species... 2186 1.7e-226 1
ZFIN|ZDB-GENE-050227-15 - symbol:atpbd4 "ATP binding doma... 904 1.2e-90 1
DICTYBASE|DDB_G0278373 - symbol:DDB_G0278373 "endoribonuc... 746 8.4e-79 2
POMBASE|SPBC577.12 - symbol:mug71 "diphthamide synthetase... 790 1.4e-78 1
UNIPROTKB|Q7L8W6 - symbol:ATPBD4 "Diphthine--ammonia liga... 751 1.9e-74 1
RGD|1310006 - symbol:Atpbd4 "ATP binding domain 4" specie... 748 4.0e-74 1
UNIPROTKB|Q2HJF5 - symbol:ATPBD4 "Diphthine--ammonia liga... 744 1.1e-73 1
MGI|MGI:1913882 - symbol:Atpbd4 "ATP binding domain 4" sp... 744 1.1e-73 1
CGD|CAL0002720 - symbol:orf19.839 species:5476 "Candida a... 590 7.6e-72 2
UNIPROTKB|Q5AHF8 - symbol:CaO19.839 "Putative uncharacter... 590 7.6e-72 2
SGD|S000004133 - symbol:DPH6 "Diphthamide synthetase" spe... 542 3.7e-66 2
GENEDB_PFALCIPARUM|PFL1080c - symbol:PFL1080c "hypothetic... 590 2.2e-57 1
UNIPROTKB|Q8I5J0 - symbol:PFL1080c "ATP-binding protein, ... 590 2.2e-57 1
ASPGD|ASPL0000099600 - symbol:AN11885 species:162425 "Eme... 194 4.8e-27 3
ASPGD|ASPL0000094803 - symbol:AN11886 species:162425 "Eme... 194 4.8e-27 3
FB|FBgn0086691 - symbol:UK114 "UK114" species:7227 "Droso... 116 2.2e-07 2
UNIPROTKB|P52758 - symbol:HRSP12 "Ribonuclease UK114" spe... 129 2.7e-07 1
UNIPROTKB|Q8U308 - symbol:yjgF "Enamine/imine deaminase" ... 104 3.8e-07 2
UNIPROTKB|Q3T114 - symbol:HRSP12 "Ribonuclease UK114" spe... 126 5.6e-07 1
UNIPROTKB|F1S0M2 - symbol:HRSP12 "Uncharacterized protein... 125 7.2e-07 1
TIGR_CMR|CHY_2460 - symbol:CHY_2460 "endoribonuclease L-P... 105 9.7e-07 2
MGI|MGI:1095401 - symbol:Hrsp12 "heat-responsive protein ... 121 1.9e-06 1
RGD|70940 - symbol:Hrsp12 "heat-responsive protein 12" sp... 118 4.0e-06 1
UNIPROTKB|Q3Z9W3 - symbol:DET0238 "Putative uncharacteriz... 134 5.3e-06 1
TIGR_CMR|DET_0238 - symbol:DET_0238 "conserved hypothetic... 134 5.3e-06 1
TIGR_CMR|GSU_2235 - symbol:GSU_2235 "endoribonuclease L-P... 98 1.1e-05 2
ZFIN|ZDB-GENE-040718-315 - symbol:hrsp12 "heat-responsive... 111 2.3e-05 1
UNIPROTKB|E1C7E1 - symbol:HRSP12 "Uncharacterized protein... 110 2.9e-05 1
TIGR_CMR|CPS_4974 - symbol:CPS_4974 "putative endoribonuc... 104 0.00013 1
UNIPROTKB|P0AGL2 - symbol:tdcF "predicted enamine/imine d... 102 0.00021 1
UNIPROTKB|P0AGL3 - symbol:tdcF "Putative reactive interme... 102 0.00021 1
UNIPROTKB|P0AGL4 - symbol:tdcF "Putative reactive interme... 102 0.00021 1
>TAIR|locus:2100910 [details] [associations]
symbol:AT3G04480 "AT3G04480" species:3702 "Arabidopsis
thaliana" [GO:0004521 "endoribonuclease activity" evidence=ISS]
Pfam:PF01042 EMBL:CP002686 Gene3D:3.40.50.620 InterPro:IPR014729
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR002761 Pfam:PF01902 TIGRFAMs:TIGR00290 OMA:GGEFETI
InterPro:IPR006175 IPI:IPI00533779 RefSeq:NP_187098.2
UniGene:At.18853 ProteinModelPortal:F4J3Q1 SMR:F4J3Q1 PRIDE:F4J3Q1
EnsemblPlants:AT3G04480.1 GeneID:819604 KEGG:ath:AT3G04480
Uniprot:F4J3Q1
Length = 718
Score = 2186 (774.6 bits), Expect = 1.7e-226, P = 1.7e-226
Identities = 425/627 (67%), Positives = 501/627 (79%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSVDELDSYMYQTVGHQIIVSYA 60
MKVVALVSGGKDSCYAMMKCIQYGH+IVALANL+P DDSVDELDSYMYQTVGHQI+V YA
Sbjct: 1 MKVVALVSGGKDSCYAMMKCIQYGHEIVALANLLPVDDSVDELDSYMYQTVGHQILVGYA 60
Query: 61 ECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIASDY 120
ECM +PLFRRRI GS+RHQKLSY+MTP DEVEDM++LL+EVKRQIPS+TAVSSGAIASDY
Sbjct: 61 ECMNVPLFRRRIRGSSRHQKLSYQMTPDDEVEDMFVLLSEVKRQIPSITAVSSGAIASDY 120
Query: 121 QRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKEIA 180
QRLRVES+CSRLGLVSLA+LWKQDQ+LLLQ+MI NGI AI VKVAA+GL+P KHLGK++A
Sbjct: 121 QRLRVESICSRLGLVSLAFLWKQDQTLLLQDMIANGIKAILVKVAAIGLDPSKHLGKDLA 180
Query: 181 FLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVGVL 240
F++PYL KLKE YG NVCGEGGEYETLTLDCPLF NA IVLDE+QVVLHS DSIAPVGVL
Sbjct: 181 FMEPYLLKLKEKYGSNVCGEGGEYETLTLDCPLFTNASIVLDEYQVVLHSPDSIAPVGVL 240
Query: 241 HPLAFHLEYKAGSASLSGSRETENSIQEKTGLVFEVQGECPQNSEAMCLPVAEVTDSVEV 300
HP FHLE K S +S +E++ LV EV G+ P S++ + D VE
Sbjct: 241 HPSTFHLEKKGNPDS--------HSPEEESSLVSEVLGDGPNTSDSTRQRDNGIVDLVEH 292
Query: 301 TDNRLNISRRKKDNTFSICCWLQETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYI 360
T NRL+ISR +K NTFSICCWL+++ ++S GL +DL VL ++ES+L+++G++W HVLYI
Sbjct: 293 TSNRLHISRAEKHNTFSICCWLEDSSESSKGLKEDLETVLTELESQLLKHGYNWQHVLYI 352
Query: 361 HLYISDMNEFAVANETYVKFITHEKCPCGVPSRSTIELPLLEVGLGKAYIEVLVANDQSK 420
HLYISDM+EFAVANETYVKFIT EKCP GVPSRSTIELPL++ GLGKAYIEVLVAND+SK
Sbjct: 353 HLYISDMSEFAVANETYVKFITQEKCPFGVPSRSTIELPLVQAGLGKAYIEVLVANDESK 412
Query: 421 RVLHVQSISCWAPSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNS 480
RVLHVQSISCWAPSCIGPYSQATLH+ VL MAGQLGLDPPTM L G EL QAL NS
Sbjct: 413 RVLHVQSISCWAPSCIGPYSQATLHQSVLHMAGQLGLDPPTMNLQTEGAIAELNQALTNS 472
Query: 481 EAVAKCFNCSISTSAIYFVVYCSTYVASSERLKIQEKLDAFLKQMRVWHFEERSMSKVLD 540
EA+A+ FNCSIS+SAI FVV+CS SER ++ EK FL + R + VLD
Sbjct: 473 EAIAESFNCSISSSAILFVVFCSARTKQSERNQLHEKFVTFLGLAK----SSRRVQNVLD 528
Query: 541 PIFLFVLASNLPKSALVEIKPILYVTDDSETVSEIVQDLSCMKAPLHWGFQHADWHESCF 600
P+FL++L +LPK ALVE+KPILYV +D++T E +D S WG++ WH+ C
Sbjct: 529 PMFLYILVPDLPKRALVEVKPILYVEEDTDTEDETSRDQSGEGHYSIWGYKPEKWHQDCV 588
Query: 601 QKCVVHEKICAVILSITCEIAARICSE 627
QK VV K+C +LSI+ E+ ++ E
Sbjct: 589 QKRVVDGKVCVAVLSISAELMRKLQGE 615
Score = 460 (167.0 bits), Expect = 4.4e-41, P = 4.4e-41
Identities = 99/213 (46%), Positives = 139/213 (65%)
Query: 533 RSMSKVLDPIFLFVLASNLPKSALVEIKPILYVTDDSETVSEIVQDLSCMKAPLHWGFQH 592
R + VLDP+FL++L +LPK ALVE+KPILYV +D++T E +D S WG++
Sbjct: 521 RRVQNVLDPMFLYILVPDLPKRALVEVKPILYVEEDTDTEDETSRDQSGEGHYSIWGYKP 580
Query: 593 ADWHESCFQKCVVHEKICAVILSITCEIAARICSESLDASQSKDCQTSQADGGMGRLSRF 652
WH+ C QK VV K+C +LSI+ E+ ++ E + + +SRF
Sbjct: 581 EKWHQDCVQKRVVDGKVCVAVLSISAELMRKLQGEEEE---------------LEIVSRF 625
Query: 653 CIYLLNKIIVENNFSWEDVTNLRLYFPTSLSMPMVTLSAIFSSAFDELAVMNPRMKIDG- 711
C+YLLNK + EN+FSW+D T+LR++F TS+ + + LSAIF SAF EL M+ +K+D
Sbjct: 626 CVYLLNKTLSENSFSWQDTTSLRIHFSTSIGVSVERLSAIFVSAFRELNEMSDGVKMDSL 685
Query: 712 -DSIFNLVPVLGAGRS-ATMDDIITCELFAQKS 742
+ IFNLVPVLGAG S A++D+IITCELFA +S
Sbjct: 686 KEPIFNLVPVLGAGNSSASLDNIITCELFALRS 718
>ZFIN|ZDB-GENE-050227-15 [details] [associations]
symbol:atpbd4 "ATP binding domain 4" species:7955
"Danio rerio" [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0017178
"diphthine-ammonia ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] Pfam:PF01042
ZFIN:ZDB-GENE-050227-15 Gene3D:3.40.50.620 InterPro:IPR014729
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
GeneTree:ENSGT00420000029820 InterPro:IPR002761 Pfam:PF01902
TIGRFAMs:TIGR00290 InterPro:IPR006175 EMBL:CU915812 EMBL:CU927916
IPI:IPI00554409 Ensembl:ENSDART00000126277 Bgee:E7F9Q1
Uniprot:E7F9Q1
Length = 456
Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
Identities = 210/468 (44%), Positives = 272/468 (58%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSV-DELDSYMYQTVGHQIIVSY 59
M+VV L+SGGKDSC+ M++C+ GH IVALANL PAD + DELDSYMYQTVGHQ +
Sbjct: 1 MRVVGLISGGKDSCFNMLQCVSAGHSIVALANLRPADHAASDELDSYMYQTVGHQAVDLI 60
Query: 60 AECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIASD 119
AE MGLPL+RR I GS+ H Y T GDEVED+Y LL VK ++ V VS GAI SD
Sbjct: 61 AEAMGLPLYRRTIEGSSVHIDREYSPTDGDEVEDLYQLLKHVKEEM-HVDGVSVGAILSD 119
Query: 120 YQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKEI 179
YQR+RVE+VC+RL L LAYLW++DQ+ LL EMI++G++AI +KVAA GL P KHLGK +
Sbjct: 120 YQRVRVENVCARLQLQPLAYLWRRDQAALLSEMISSGLHAILIKVAAFGLHPDKHLGKSL 179
Query: 180 AFLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVGV 239
A ++ YLH+L E YG+++CGEGGEYET TLDCPLF +I++D + V+HS D+ APVG
Sbjct: 180 AEMELYLHELSEKYGVHICGEGGEYETFTLDCPLF-KKKIIIDATETVIHSDDAFAPVGF 238
Query: 240 LHPLAFHLEYKA-GSA-----SLSG-------SRETEN-SIQEKTGLVFEVQGECPQNSE 285
L H E K GS SLS R TE +KT +VQ ECP +
Sbjct: 239 LRFTKMHTEDKTEGSGGPPPPSLSACPCQSAIDRMTEELEYADKTA---DVQRECPSH-- 293
Query: 286 AMCLPVAEVTDSVEVTDNRLNISRRKKDNTFSICCWLQETQKTSAGLLDDLRVVLKQIES 345
T S D +S + F L + + V ++S
Sbjct: 294 ---------TQSTWQLDEGCEVSHSSSSSGFQWISGLSALPSEHPDIQSQAQHVFTLLQS 344
Query: 346 KLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEK----C-PCGVPSRSTIELPL 400
+L G HVL +HLY+S M +F + N Y + TH C +P +++ +
Sbjct: 345 RLQEMGSALRHVLLVHLYVSSMQDFGLINSIYSRLFTHNPPARVCVQASLPVGQQLQMDV 404
Query: 401 LEVGLGKAY--IEVLVANDQ---SKRVLHVQSISCWAPSCIGPYSQAT 443
L KA V ++ + LHVQS+S WAP+ IGPYSQAT
Sbjct: 405 LLQDQTKASPSSSSSVCEEECFPQRETLHVQSVSHWAPANIGPYSQAT 452
>DICTYBASE|DDB_G0278373 [details] [associations]
symbol:DDB_G0278373 "endoribonuclease L-PSP
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] dictyBase:DDB_G0278373 Pfam:PF01042 EMBL:AAFI02000023
Gene3D:3.40.50.620 InterPro:IPR014729 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 InterPro:IPR002761 Pfam:PF01902
TIGRFAMs:TIGR00290 eggNOG:COG0251 InterPro:IPR006175
RefSeq:XP_642320.1 ProteinModelPortal:Q54Y82
EnsemblProtists:DDB0237492 GeneID:8621526 KEGG:ddi:DDB_G0278373
InParanoid:Q54Y82 Uniprot:Q54Y82
Length = 752
Score = 746 (267.7 bits), Expect = 8.4e-79, Sum P(2) = 8.4e-79
Identities = 186/493 (37%), Positives = 281/493 (56%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPAD-DSVDELDSYMYQTVGHQIIVSY 59
+++V L+SGGKDS Y +++C++ GH+IVALANL P +S +ELDS+MYQTVG+ +I
Sbjct: 2 VEIVGLISGGKDSIYNLIECVRNGHKIVALANLKPPKTNSSEELDSFMYQTVGNNLIEII 61
Query: 60 A-ECMGLPLFRRRIHGSTRHQKL-SYR----MTPGDEVEDMYILLNEVKRQIPSVTAVSS 113
A EC+ LPL++ I+G+ ++ +Y + DEVED++ LL VK P++ VS
Sbjct: 62 AKECLELPLYQIEINGTAISRETDTYNEELEVNSKDEVEDLHTLLKLVKESHPNIKGVSC 121
Query: 114 GAIASDYQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGK 173
GAI S YQR+RVE+ CSRL L S +YLW ++Q LL+EMI I AI +KVA+MGL K
Sbjct: 122 GAILSTYQRIRVENCCSRLNLTSYSYLWNRNQDELLREMIDCKIEAIIIKVASMGLVAEK 181
Query: 174 HLGKEIAFLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADS 233
HL K I L P L+ L + +G+++CGEGGEYE++ +DCPL+ RI +D++Q ++HS D+
Sbjct: 182 HLLKSITQLYPTLYSLNQKFGVHICGEGGEYESIVIDCPLY-KKRINIDQYQTIIHSDDA 240
Query: 234 IAPVGVLHPLAFHLEYKAGSASLSGSRETENSIQEKTGLVFEVQGECPQNSEAMCLPVA- 292
+ V A+ K + S + ++SI + + +E + +P
Sbjct: 241 FSQV------AYASISKYSTTEKSTQQIIQDSIYLNSNYLNRNLNNLKNFNENLLIPTLI 294
Query: 293 -----EVTDSVEVT-----DNRLNISRR----KKDNTFSICCWLQ-------ETQKTSAG 331
+ T+S T ++ LNI K N F++ + K
Sbjct: 295 SNSTNDQTNSTNSTNFNFLESNLNIEYSLNLIKNKNFFNLSSTTTKINDNDIDNDKDDYN 354
Query: 332 LLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVP 391
+ + L L I + L +LY++LYISDM +F++ N+ Y K+ + P
Sbjct: 355 IGELLDKALLNISNILKENSLSIDQLLYVNLYISDMKDFSIVNQYYYKYFKNN--PA--- 409
Query: 392 SRSTIELPLLEVGLGKAYIEVLVANDQSKRVLHVQSISCWAPSCIGPYSQATLHKEVLQM 451
SR+ IE+PL + K I+ + A ++ K LHVQSIS WAP+CIGPYSQA L+K +
Sbjct: 410 SRACIEIPLSKNDKTKFLIDCIGAIEK-KSNLHVQSISNWAPACIGPYSQANLYKGFTFL 468
Query: 452 AGQLGLDPPTMTL 464
AGQ+ + P + L
Sbjct: 469 AGQISMIPNNLDL 481
Score = 65 (27.9 bits), Expect = 8.4e-79, Sum P(2) = 8.4e-79
Identities = 22/89 (24%), Positives = 44/89 (49%)
Query: 471 VELEQALQNSEAVAKCFNCSISTSAIYFVVYCSTYVASSERLKIQEKLDAFLKQMRVWHF 530
+E++Q L N+ + C N S S + I ++ S + S+ + E + +LKQ + +
Sbjct: 508 IEIQQILLNTYNLLDCLNISFS-NVIQSTIFISNEIDST----MFENIINYLKQFFIDNN 562
Query: 531 EERSMSKVLDPIFLFVLASNLPKSALVEI 559
+ + I +F + LPK++ +EI
Sbjct: 563 NDSGSDGSISLIQIFKIPK-LPKNSNIEI 590
>POMBASE|SPBC577.12 [details] [associations]
symbol:mug71 "diphthamide synthetase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0017178 "diphthine-ammonia ligase activity" evidence=ISO]
[GO:0017183 "peptidyl-diphthamide biosynthetic process from
peptidyl-histidine" evidence=ISO] UniPathway:UPA00559
PomBase:SPBC577.12 Pfam:PF01042 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0004521 Gene3D:3.40.50.620 InterPro:IPR014729
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR002761 Pfam:PF01902 TIGRFAMs:TIGR00290 HSSP:O58996
PIR:T40556 RefSeq:NP_595310.1 ProteinModelPortal:Q9USQ7
EnsemblFungi:SPBC577.12.1 GeneID:2540717 KEGG:spo:SPBC577.12
eggNOG:COG0251 HOGENOM:HOG000247962 KO:K06927 OMA:GGEFETI
OrthoDB:EOG4ZSDBS NextBio:20801839 InterPro:IPR006175
PROSITE:PS01094 Uniprot:Q9USQ7
Length = 606
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 189/499 (37%), Positives = 280/499 (56%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSVDELDSYMYQTVGHQIIVSYA 60
MKV+ L+SGGKDSC+ +M C+ GH++VALANL P +D DE+DS+MYQ+VGH +I YA
Sbjct: 1 MKVLGLISGGKDSCFNLMHCVSLGHEVVALANLHP-EDGKDEIDSFMYQSVGHDVIPLYA 59
Query: 61 ECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIASDY 120
EC LPL+R +I G + +Q L Y+ T DE ED+Y L+ V P + AVS+GAI S Y
Sbjct: 60 ECFDLPLYREKIGGQSINQNLDYQFTEKDETEDLYRLIKRVLTNHPDLEAVSTGAILSTY 119
Query: 121 QRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKEIA 180
QR RVE+VC RLGL SL++LW++DQ LL +M+ +G+NAI +KVAA+GL K LGK +A
Sbjct: 120 QRTRVENVCKRLGLKSLSFLWQKDQEKLLNDMVVSGLNAILIKVAAIGLTR-KDLGKSLA 178
Query: 181 FLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVGVL 240
+ L L + + ++ CGEGGEYETL LDCPLF RIVL + +VV HS+ + + V
Sbjct: 179 EMQDKLLTLNKKFELHPCGEGGEYETLVLDCPLF-KKRIVLTDKEVVEHSSGEVCYLKVK 237
Query: 241 HPLAFHLEYKAGSASLSGSRETENSIQEKTGLVFEVQGECPQNSEAMCLPVAEVTDSVEV 300
+ E++ S S E + E+ ++ + + + E S+
Sbjct: 238 ACVKDKPEWQPISLK-SELVPNEELLGEEYSHIYHTISKKYELIDDQ----EETPTSLIP 292
Query: 301 TDNRLNISRRKKDNTFSICCWLQETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYI 360
R + ++KK +F + + T+ + + + + L YG+ +V ++
Sbjct: 293 IPLRESAFQQKK-GSFLVLGNVVATKGSYNTFQGEAESAINNLNELLGTYGYSNKNVYFV 351
Query: 361 HLYISDMNEFAVANETYVKFITHEKCPCGVPSRSTIELPLLEVGLGKAYIEVLVANDQSK 420
+ +S M++FA N Y K+ P PSRS + PL + + +V + K
Sbjct: 352 TVILSSMSKFAEFNSVYNKYFDFTN-P---PSRSCVAAPLASEY--RIVMSCIVGDVTEK 405
Query: 421 RVLHVQSISCWAPSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNS 480
R LHVQ S WAP+ IGPYSQ+ V+ ++GQ+GL P M L E+ ALQ++
Sbjct: 406 RALHVQGQSYWAPANIGPYSQSICANGVVFISGQIGLIPSVMELKLHDKIFEMVLALQHA 465
Query: 481 EAVAKCFNCSISTSAIYFV 499
VAK + + +V
Sbjct: 466 NRVAKAMRVGSLIACLAYV 484
>UNIPROTKB|Q7L8W6 [details] [associations]
symbol:ATPBD4 "Diphthine--ammonia ligase" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017183
"peptidyl-diphthamide biosynthetic process from peptidyl-histidine"
evidence=IEA;TAS] [GO:0017178 "diphthine-ammonia ligase activity"
evidence=TAS] UniPathway:UPA00559 Gene3D:3.40.50.620
InterPro:IPR014729 CTD:89978 eggNOG:COG2102 HOVERGEN:HBG100452
OMA:YGLGKEW InterPro:IPR002761 Pfam:PF01902 TIGRFAMs:TIGR00290
EMBL:AK094007 EMBL:AK125017 EMBL:AC015994 EMBL:AC019288
EMBL:BC008485 EMBL:BC066652 IPI:IPI00063121 IPI:IPI00903052
RefSeq:NP_001135444.1 RefSeq:NP_542381.1 UniGene:Hs.107196
HSSP:O58996 ProteinModelPortal:Q7L8W6 SMR:Q7L8W6 STRING:Q7L8W6
PhosphoSite:Q7L8W6 DMDM:143955280 PaxDb:Q7L8W6 PRIDE:Q7L8W6
Ensembl:ENST00000256538 Ensembl:ENST00000440392 GeneID:89978
KEGG:hsa:89978 UCSC:uc001zja.3 GeneCards:GC15M035509
HGNC:HGNC:30543 HPA:HPA042976 neXtProt:NX_Q7L8W6
PharmGKB:PA142672572 HOGENOM:HOG000065772 InParanoid:Q7L8W6
OrthoDB:EOG495ZRT PhylomeDB:Q7L8W6 GenomeRNAi:89978 NextBio:76470
ArrayExpress:Q7L8W6 Bgee:Q7L8W6 CleanEx:HS_ATPBD4
Genevestigator:Q7L8W6 Uniprot:Q7L8W6
Length = 267
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 153/268 (57%), Positives = 192/268 (71%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSV--DELDSYMYQTVGHQIIVS 58
M+V AL+SGGKDSCY MM+CI GHQIVALANL PA++ V DELDSYMYQTVGH I
Sbjct: 1 MRVAALISGGKDSCYNMMQCIAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDL 60
Query: 59 YAECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIAS 118
YAE M LPL+RR I G + + Y GDEVED+Y LL VK + V +S GAI S
Sbjct: 61 YAEAMALPLYRRTIRGRSLDTRQVYTKCEGDEVEDLYELLKLVKEK-EEVEGISVGAILS 119
Query: 119 DYQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKE 178
DYQR+RVE+VC RL L LAYLW+++Q LL+EMI++ I A+ +KVAA+GL+P KHLGK
Sbjct: 120 DYQRIRVENVCKRLNLQPLAYLWQRNQEDLLREMISSNIQAMIIKVAALGLDPDKHLGKT 179
Query: 179 IAFLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVG 238
+ ++PYL +L + YG++VCGEGGEYET TLDCPLF +I++D +VV+HSAD+ APV
Sbjct: 180 LDQMEPYLIELSKKYGVHVCGEGGEYETFTLDCPLF-KKKIIVDSSEVVIHSADAFAPVA 238
Query: 239 VLHPLAFHLEYKAGSASLSGSRETENSI 266
L L HLE K +S+ + T N I
Sbjct: 239 YLRFLELHLEDKV--SSVPDNYRTSNYI 264
>RGD|1310006 [details] [associations]
symbol:Atpbd4 "ATP binding domain 4" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017178
"diphthine-ammonia ligase activity" evidence=IEA] [GO:0017183
"peptidyl-diphthamide biosynthetic process from peptidyl-histidine"
evidence=IEA] UniPathway:UPA00559 RGD:1310006 Gene3D:3.40.50.620
InterPro:IPR014729 CTD:89978 eggNOG:COG2102 HOVERGEN:HBG100452
InterPro:IPR002761 Pfam:PF01902 TIGRFAMs:TIGR00290 HSSP:O58996
OrthoDB:EOG495ZRT HOGENOM:HOG000229449 EMBL:BC087148
IPI:IPI00373668 RefSeq:NP_001014203.1 UniGene:Rn.107116
ProteinModelPortal:Q5M9F5 STRING:Q5M9F5 PRIDE:Q5M9F5 GeneID:362191
KEGG:rno:362191 UCSC:RGD:1310006 NextBio:678974
Genevestigator:Q5M9F5 Uniprot:Q5M9F5
Length = 267
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 154/268 (57%), Positives = 188/268 (70%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSV--DELDSYMYQTVGHQIIVS 58
M+V AL+SGGKDSCY MM+CI GHQIVALANL P D+ V DELDSYMYQTVGH I
Sbjct: 1 MRVAALISGGKDSCYNMMRCIAEGHQIVALANLRPDDNQVESDELDSYMYQTVGHHAIDL 60
Query: 59 YAECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIAS 118
YAE M LPL+RR I G + Y GDEVED+Y LL VK + + VS GAI S
Sbjct: 61 YAEAMALPLYRRTIRGRSLETGRVYTRCEGDEVEDLYELLKLVKEK-EEIEGVSVGAILS 119
Query: 119 DYQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKE 178
DYQR+RVE+VC RL L LAYLW+++Q LL+EMI + I AI +KVAA+GL+P KHLGK
Sbjct: 120 DYQRVRVENVCKRLNLQPLAYLWQRNQEDLLREMIASNIEAIIIKVAALGLDPDKHLGKT 179
Query: 179 IAFLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVG 238
+ ++PYL +L + YG++VCGEGGEYET TLDCPLF +IV+D + V+HSAD+ APV
Sbjct: 180 LGEMEPYLLELSKKYGVHVCGEGGEYETFTLDCPLF-KKKIVVDTSEAVIHSADAFAPVA 238
Query: 239 VLHPLAFHLEYKAGSASLSGSRETENSI 266
L HLE K +S+ G ET + I
Sbjct: 239 YLRLSGLHLEEKV--SSVPGDDETTSYI 264
>UNIPROTKB|Q2HJF5 [details] [associations]
symbol:ATPBD4 "Diphthine--ammonia ligase" species:9913 "Bos
taurus" [GO:0017183 "peptidyl-diphthamide biosynthetic process from
peptidyl-histidine" evidence=IEA] [GO:0017178 "diphthine-ammonia
ligase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] UniPathway:UPA00559 Gene3D:3.40.50.620
InterPro:IPR014729 EMBL:BC105462 IPI:IPI00688867
RefSeq:NP_001070484.1 UniGene:Bt.42412 ProteinModelPortal:Q2HJF5
STRING:Q2HJF5 Ensembl:ENSBTAT00000055382 GeneID:767944
KEGG:bta:767944 CTD:89978 eggNOG:COG2102
GeneTree:ENSGT00420000029820 HOVERGEN:HBG100452 InParanoid:Q2HJF5
OMA:YGLGKEW NextBio:20918300 InterPro:IPR002761 Pfam:PF01902
TIGRFAMs:TIGR00290 Uniprot:Q2HJF5
Length = 267
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 153/268 (57%), Positives = 189/268 (70%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSV--DELDSYMYQTVGHQIIVS 58
M+V AL+SGGKDSCY MM+C+ GHQIVALANL PA++ V DELDSYMYQTVGH I
Sbjct: 1 MRVAALISGGKDSCYNMMQCVAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDL 60
Query: 59 YAECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIAS 118
YAE M LPL+RR I G + Y GDEVED+Y LL VK + V +S GAI S
Sbjct: 61 YAEAMALPLYRRTIRGKSVDTGPVYTKCEGDEVEDLYELLKLVKEK-EEVEGISVGAILS 119
Query: 119 DYQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKE 178
DYQR+RVE+VC RL L LAYLW+++Q LLQEMI++ I AI +KVAA+GL+P KHLGK
Sbjct: 120 DYQRVRVENVCKRLNLQPLAYLWQRNQEDLLQEMISSNIQAIIIKVAALGLDPDKHLGKP 179
Query: 179 IAFLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVG 238
+ ++PYL +L + YG++VCGEGGEYET TLDCPLF +I++D +VV HSAD+ APV
Sbjct: 180 LDQMEPYLLELSKKYGVHVCGEGGEYETFTLDCPLF-KKKIIVDSSEVVTHSADAFAPVA 238
Query: 239 VLHPLAFHLEYKAGSASLSGSRETENSI 266
L L HLE K + + + T N I
Sbjct: 239 YLRFLELHLEDKV--SPVPDNCRTSNDI 264
>MGI|MGI:1913882 [details] [associations]
symbol:Atpbd4 "ATP binding domain 4" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] UniPathway:UPA00559 MGI:MGI:1913882 Gene3D:3.40.50.620
InterPro:IPR014729 CTD:89978 eggNOG:COG2102
GeneTree:ENSGT00420000029820 HOVERGEN:HBG100452 OMA:YGLGKEW
InterPro:IPR002761 Pfam:PF01902 TIGRFAMs:TIGR00290 HSSP:O58996
OrthoDB:EOG495ZRT EMBL:AK006965 EMBL:AK007021 EMBL:AK017595
EMBL:AK088160 EMBL:AK145789 EMBL:AL732404 EMBL:BC022995
IPI:IPI00131913 IPI:IPI00153485 IPI:IPI00651788 RefSeq:NP_079951.1
UniGene:Mm.117809 ProteinModelPortal:Q9CQ28 SMR:Q9CQ28
STRING:Q9CQ28 PhosphoSite:Q9CQ28 PaxDb:Q9CQ28 PRIDE:Q9CQ28
Ensembl:ENSMUST00000028640 Ensembl:ENSMUST00000055144
Ensembl:ENSMUST00000102542 GeneID:66632 KEGG:mmu:66632
UCSC:uc008lqk.1 UCSC:uc008lql.1 UCSC:uc008lqm.1
HOGENOM:HOG000229449 NextBio:322230 Bgee:Q9CQ28 CleanEx:MM_ATPBD4
Genevestigator:Q9CQ28 Uniprot:Q9CQ28
Length = 267
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 154/268 (57%), Positives = 187/268 (69%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSV--DELDSYMYQTVGHQIIVS 58
M+V AL+SGGKDSCY MM+CI GHQIVALANL P ++ V DELDSYMYQTVGH I
Sbjct: 1 MRVAALISGGKDSCYNMMQCIAEGHQIVALANLRPDENQVESDELDSYMYQTVGHHAIDL 60
Query: 59 YAECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIAS 118
YAE M LPL+RR I G + Y GDEVED+Y LL VK + + VS GAI S
Sbjct: 61 YAEAMALPLYRRAIRGRSLETGRVYTQCEGDEVEDLYELLKLVKEK-EEIEGVSVGAILS 119
Query: 119 DYQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKE 178
DYQR RVE+VC RL L LAYLW+++Q LL+EMI + I AI +KVAA+GL+P KHLGK
Sbjct: 120 DYQRGRVENVCKRLNLQPLAYLWQRNQEDLLREMIASNIKAIIIKVAALGLDPDKHLGKT 179
Query: 179 IAFLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVG 238
+ ++PYL +L + YG++VCGEGGEYET TLDCPLF +IV+D + V+HSAD+ APV
Sbjct: 180 LVEMEPYLLELSKKYGVHVCGEGGEYETFTLDCPLF-KKKIVVDSSEAVMHSADAFAPVA 238
Query: 239 VLHPLAFHLEYKAGSASLSGSRETENSI 266
L HLE K +S+ ET NSI
Sbjct: 239 YLRLSRLHLEEKV--SSVPADDETANSI 264
>CGD|CAL0002720 [details] [associations]
symbol:orf19.839 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] CGD:CAL0002720 Pfam:PF01042 GO:GO:0035690
Gene3D:3.40.50.620 InterPro:IPR014729 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 EMBL:AACQ01000019
InterPro:IPR002761 Pfam:PF01902 TIGRFAMs:TIGR00290 eggNOG:COG0251
InterPro:IPR006175 RefSeq:XP_720963.1 ProteinModelPortal:Q5AHF8
GeneID:3637399 KEGG:cal:CaO19.839 Uniprot:Q5AHF8
Length = 646
Score = 590 (212.7 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 113/232 (48%), Positives = 161/232 (69%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSVDELDSYMYQTVGHQIIVSYA 60
MK + L+SGGKDS + + CI GH++VAL NL P + DE+DS+M+QTVGH +I Y+
Sbjct: 20 MKFIGLISGGKDSFFNIYHCISQGHELVALGNLYP--EISDEIDSFMFQTVGHDVIEYYS 77
Query: 61 ECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIASDY 120
+C+ +PL+R+ I G + +Q L Y +T DE+ED+Y LL+++ P + VS GAI S Y
Sbjct: 78 QCLDVPLYRQPILGKSTNQNLEYSVTENDEIEDLYKLLSKIVDAHPEIEGVSCGAILSHY 137
Query: 121 QRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKEIA 180
QR RVE+VC RLGL SL YLW+++Q L++EM +G++A +KVAA+GL HLGK I+
Sbjct: 138 QRTRVENVCDRLGLTSLTYLWQRNQYDLMKEMCESGLDARIIKVAAIGLTKN-HLGKSIS 196
Query: 181 FLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSAD 232
L P L KL Y ++CGEGGE+ET+ LDCP F ++V+ + +V HS+D
Sbjct: 197 ELFPALVKLNLMYEAHICGEGGEFETIVLDCPFFKKKKLVITQQDIVEHSSD 248
Score = 155 (59.6 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 46/170 (27%), Positives = 79/170 (46%)
Query: 334 DDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSR 393
D + + +Q++ L + + +I L +SDM+ FA N+ Y F P PSR
Sbjct: 331 DQTKDIFQQLDKLLGDHKLTVNDIQHITLLLSDMSNFAKVNKFYGTFFKDIYLP---PSR 387
Query: 394 STIELPLLEVGLGKAYIEVLVANDQSKRVLHVQSISCWAPSCIGPYSQATLHKE----VL 449
IE + + L +++ + Q K +H++S S W P IGPYSQ+ ++ +
Sbjct: 388 ICIETEVESIQLSC----IVLKHIQPKTGIHIRSRSYWGPQNIGPYSQSIVNTQSSYKTA 443
Query: 450 QMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSISTSAIYFV 499
++GQ+ L P TM + N + +LQ+ V N S + F+
Sbjct: 444 TLSGQIPLIPATMDISNKSIAFDSALSLQHLVRVKNLVNVKQLASVVCFI 493
>UNIPROTKB|Q5AHF8 [details] [associations]
symbol:CaO19.839 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] CGD:CAL0002720 Pfam:PF01042 GO:GO:0035690
Gene3D:3.40.50.620 InterPro:IPR014729 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 EMBL:AACQ01000019
InterPro:IPR002761 Pfam:PF01902 TIGRFAMs:TIGR00290 eggNOG:COG0251
InterPro:IPR006175 RefSeq:XP_720963.1 ProteinModelPortal:Q5AHF8
GeneID:3637399 KEGG:cal:CaO19.839 Uniprot:Q5AHF8
Length = 646
Score = 590 (212.7 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 113/232 (48%), Positives = 161/232 (69%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSVDELDSYMYQTVGHQIIVSYA 60
MK + L+SGGKDS + + CI GH++VAL NL P + DE+DS+M+QTVGH +I Y+
Sbjct: 20 MKFIGLISGGKDSFFNIYHCISQGHELVALGNLYP--EISDEIDSFMFQTVGHDVIEYYS 77
Query: 61 ECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIASDY 120
+C+ +PL+R+ I G + +Q L Y +T DE+ED+Y LL+++ P + VS GAI S Y
Sbjct: 78 QCLDVPLYRQPILGKSTNQNLEYSVTENDEIEDLYKLLSKIVDAHPEIEGVSCGAILSHY 137
Query: 121 QRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKEIA 180
QR RVE+VC RLGL SL YLW+++Q L++EM +G++A +KVAA+GL HLGK I+
Sbjct: 138 QRTRVENVCDRLGLTSLTYLWQRNQYDLMKEMCESGLDARIIKVAAIGLTKN-HLGKSIS 196
Query: 181 FLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSAD 232
L P L KL Y ++CGEGGE+ET+ LDCP F ++V+ + +V HS+D
Sbjct: 197 ELFPALVKLNLMYEAHICGEGGEFETIVLDCPFFKKKKLVITQQDIVEHSSD 248
Score = 155 (59.6 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 46/170 (27%), Positives = 79/170 (46%)
Query: 334 DDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSR 393
D + + +Q++ L + + +I L +SDM+ FA N+ Y F P PSR
Sbjct: 331 DQTKDIFQQLDKLLGDHKLTVNDIQHITLLLSDMSNFAKVNKFYGTFFKDIYLP---PSR 387
Query: 394 STIELPLLEVGLGKAYIEVLVANDQSKRVLHVQSISCWAPSCIGPYSQATLHKE----VL 449
IE + + L +++ + Q K +H++S S W P IGPYSQ+ ++ +
Sbjct: 388 ICIETEVESIQLSC----IVLKHIQPKTGIHIRSRSYWGPQNIGPYSQSIVNTQSSYKTA 443
Query: 450 QMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSISTSAIYFV 499
++GQ+ L P TM + N + +LQ+ V N S + F+
Sbjct: 444 TLSGQIPLIPATMDISNKSIAFDSALSLQHLVRVKNLVNVKQLASVVCFI 493
>SGD|S000004133 [details] [associations]
symbol:DPH6 "Diphthamide synthetase" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0017178 "diphthine-ammonia ligase
activity" evidence=IEA;IMP;IDA] [GO:0017183 "peptidyl-diphthamide
biosynthetic process from peptidyl-histidine" evidence=IEA;IMP;IDA]
UniPathway:UPA00559 SGD:S000004133 Pfam:PF01042 GO:GO:0005737
EMBL:BK006945 EMBL:X91258 EMBL:U53881 GO:GO:0090305 GO:GO:0004519
Gene3D:3.40.50.620 InterPro:IPR014729 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 GO:GO:0017183
GeneTree:ENSGT00420000029820 InterPro:IPR002761 Pfam:PF01902
TIGRFAMs:TIGR00290 HSSP:O58996 eggNOG:COG0251 HOGENOM:HOG000247962
KO:K06927 OMA:GGEFETI OrthoDB:EOG4ZSDBS InterPro:IPR006175
PROSITE:PS01094 EMBL:Z73315 PIR:S64985 RefSeq:NP_013244.1
ProteinModelPortal:Q12429 SMR:Q12429 DIP:DIP-2618N IntAct:Q12429
MINT:MINT-539958 STRING:Q12429 PaxDb:Q12429 PeptideAtlas:Q12429
EnsemblFungi:YLR143W GeneID:850835 KEGG:sce:YLR143W CYGD:YLR143w
BioCyc:MetaCyc:MONOMER-17855 NextBio:967108 Genevestigator:Q12429
GermOnline:YLR143W GO:GO:0017178 Uniprot:Q12429
Length = 685
Score = 542 (195.9 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 112/237 (47%), Positives = 157/237 (66%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSVDELDSYMYQTVGHQIIVSYA 60
MK +AL+SGGKDS Y + C++ H+++AL N+ P + ELDS+M+QTVGH +I Y+
Sbjct: 1 MKFIALISGGKDSFYNIFHCLKNNHELIALGNIYPKESEEQELDSFMFQTVGHDLIDYYS 60
Query: 61 ECMGLPLFRRRIHGSTRHQ-KLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIASD 119
+C+G+PLFRR I +T + +L+Y T DE+E+++ LL VK +IP + AVS GAI S
Sbjct: 61 KCIGVPLFRRSILRNTSNNVELNYTATQDDEIEELFELLRTVKDKIPDLEAVSVGAILSS 120
Query: 120 YQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMI------------TNGIN---AITVKV 164
YQR RVE+VCSRLGLV L+YLW++DQ+ L+ EM TN N A +KV
Sbjct: 121 YQRTRVENVCSRLGLVVLSYLWQRDQAELMGEMCLMSKDVNNVENDTNSGNKFDARIIKV 180
Query: 165 AAMGLEPGKHLGKEIAFLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVL 221
AA+GL KHLG + + P L KL + Y +++CGEGGE+ET+ LD P F + + L
Sbjct: 181 AAIGLNE-KHLGMSLPMMQPVLQKLNQLYQVHICGEGGEFETMVLDAPFFQHGYLEL 236
Score = 149 (57.5 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 63/232 (27%), Positives = 105/232 (45%)
Query: 356 HVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSRSTIELPLLEVGLG-KAYIEVLV 414
H+L L I DM+ F N+ Y +F+ K PSR+ + L + + V V
Sbjct: 359 HILSASLLIRDMSNFGKINKIYNEFLDLSKYGPLPPSRACVGSKCLPEDCHVQLSVVVDV 418
Query: 415 ANDQSKRV------LHVQSISCWAPSCIGPYSQAT-LHKEVLQMA---GQLGLDPPTMTL 464
N +++ LHVQ S WAP IGPYSQ+T L+ + Q++ GQ+GL P +M +
Sbjct: 419 KNTGKEKINKNKGGLHVQGRSYWAPCNIGPYSQSTWLNDDANQVSFISGQIGLVPQSMEI 478
Query: 465 CNGGPTVELEQALQNSEAVAKCFNCSISTSAIYFVVYCSTYVASSERLKIQEKLDAFLKQ 524
T ++ ALQ+ + + C + ++ C Y++ L K AF
Sbjct: 479 LGTPLTDQIVLALQHFDTL-----CETIGAQEKLLMTC--YISDESVLDSVIKTWAFYCS 531
Query: 525 MRVWHFEERSMSKV--LDPIFLFVLASNLPKSALVEIKPIL---YVTDDSET 571
+ H + M K ++ + V S LP+ A+ E + + DD+++
Sbjct: 532 -NMNHRSDLWMDKSDDVEKCLVLVKISELPRGAVAEFGGVTCKRLIVDDNDS 582
>GENEDB_PFALCIPARUM|PFL1080c [details] [associations]
symbol:PFL1080c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
GO:GO:0005524 EMBL:AE014188 Gene3D:3.40.50.620 InterPro:IPR014729
InterPro:IPR002761 Pfam:PF01902 TIGRFAMs:TIGR00290
HOGENOM:HOG000229449 KO:K06927 RefSeq:XP_001350622.1
ProteinModelPortal:Q8I5J0 EnsemblProtists:PFL1080c:mRNA
GeneID:811268 KEGG:pfa:PFL1080c EuPathDB:PlasmoDB:PF3D7_1222500
OMA:LHGEAMG ProtClustDB:CLSZ2431591 Uniprot:Q8I5J0
Length = 247
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 114/250 (45%), Positives = 167/250 (66%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSVDELDSYMYQTVGHQIIVSYA 60
M V+ L+SGGKDS + C + GH I+ALA+L+P + +E DS+MYQ+ G +++ S A
Sbjct: 1 MNVLGLISGGKDSIQNLCYCHKNGHTIIALAHLIPYEYQ-NETDSFMYQSAGFELVPSIA 59
Query: 61 ECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIASDY 120
CM PL + I L+Y P DEVED++ L+++ K Q PS+ AVS GAI S Y
Sbjct: 60 RCMEKPLIQHEIKRKAIKLDLAYTYDPNDEVEDLFELIHKAKTQFPSINAVSCGAIKSTY 119
Query: 121 QRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKEIA 180
Q+ R+E VC RL L L YLW +D+ +LQ MI +G+ AI VK+A+ GL+ +H+GK I
Sbjct: 120 QKKRLEHVCERLNLDILTYLWDRDEKEILQGMINDGVEAILVKIASYGLKK-EHVGKSIK 178
Query: 181 FLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVGVL 240
+ YL + E YG+N+CGEGGEYET TLDCPLF + +I++++++++ H+ D ++PV +
Sbjct: 179 EMYEYLKMINEKYGLNICGEGGEYETATLDCPLFKH-KIIIEDYEIIQHTDDLVSPVFLF 237
Query: 241 HPLAFHLEYK 250
PL + LE K
Sbjct: 238 KPLKWKLEKK 247
>UNIPROTKB|Q8I5J0 [details] [associations]
symbol:PFL1080c "ATP-binding protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
GO:GO:0005524 EMBL:AE014188 Gene3D:3.40.50.620 InterPro:IPR014729
InterPro:IPR002761 Pfam:PF01902 TIGRFAMs:TIGR00290
HOGENOM:HOG000229449 KO:K06927 RefSeq:XP_001350622.1
ProteinModelPortal:Q8I5J0 EnsemblProtists:PFL1080c:mRNA
GeneID:811268 KEGG:pfa:PFL1080c EuPathDB:PlasmoDB:PF3D7_1222500
OMA:LHGEAMG ProtClustDB:CLSZ2431591 Uniprot:Q8I5J0
Length = 247
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 114/250 (45%), Positives = 167/250 (66%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSVDELDSYMYQTVGHQIIVSYA 60
M V+ L+SGGKDS + C + GH I+ALA+L+P + +E DS+MYQ+ G +++ S A
Sbjct: 1 MNVLGLISGGKDSIQNLCYCHKNGHTIIALAHLIPYEYQ-NETDSFMYQSAGFELVPSIA 59
Query: 61 ECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIASDY 120
CM PL + I L+Y P DEVED++ L+++ K Q PS+ AVS GAI S Y
Sbjct: 60 RCMEKPLIQHEIKRKAIKLDLAYTYDPNDEVEDLFELIHKAKTQFPSINAVSCGAIKSTY 119
Query: 121 QRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKEIA 180
Q+ R+E VC RL L L YLW +D+ +LQ MI +G+ AI VK+A+ GL+ +H+GK I
Sbjct: 120 QKKRLEHVCERLNLDILTYLWDRDEKEILQGMINDGVEAILVKIASYGLKK-EHVGKSIK 178
Query: 181 FLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVGVL 240
+ YL + E YG+N+CGEGGEYET TLDCPLF + +I++++++++ H+ D ++PV +
Sbjct: 179 EMYEYLKMINEKYGLNICGEGGEYETATLDCPLFKH-KIIIEDYEIIQHTDDLVSPVFLF 237
Query: 241 HPLAFHLEYK 250
PL + LE K
Sbjct: 238 KPLKWKLEKK 247
>ASPGD|ASPL0000099600 [details] [associations]
symbol:AN11885 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000374 Pfam:PF01148
Pfam:PF01042 GO:GO:0016020 EMBL:BN001307 Gene3D:3.40.50.620
InterPro:IPR014729 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 EMBL:AACD01000026 GO:GO:0016779 InterPro:IPR002761
Pfam:PF01902 eggNOG:COG0251 InterPro:IPR006175 RefSeq:XP_659257.1
ProteinModelPortal:Q5BCS7 EnsemblFungi:CADANIAT00008292
GeneID:2875381 KEGG:ani:AN1653.2 OrthoDB:EOG4PRX0F Uniprot:Q5BCS7
Length = 1685
Score = 194 (73.4 bits), Expect = 4.8e-27, Sum P(3) = 4.8e-27
Identities = 44/101 (43%), Positives = 64/101 (63%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANL----MPA------DDSV-----DELDS 45
+ V+AL+SGGKDS Y+++ CI+ GH++VALANL +PA +DS+ D++DS
Sbjct: 10 LNVIALISGGKDSLYSILHCIRNGHKVVALANLHPPPIPAISSNSDNDSIQPETADDIDS 69
Query: 46 YMYQTVGHQIIVSYAECMGLPLFRRRIHGSTRHQKLSYRMT 86
+MYQT+G +I Y E +G+PL+R I G YR T
Sbjct: 70 FMYQTIGWSVIPLYEEALGIPLYRAPIIGGAVDAGRVYRNT 110
Score = 141 (54.7 bits), Expect = 4.8e-27, Sum P(3) = 4.8e-27
Identities = 39/98 (39%), Positives = 53/98 (54%)
Query: 89 DEVEDMYILLNEVKRQIPSVTAVSSGAIASDYQRLRVESVCSRLGLVSLAYLWK------ 142
DE E + LL +V P AV +GAI S YQR R+E + SRLGLV LA+LW+
Sbjct: 132 DETESLIPLLRKVMAAHPEANAVCAGAILSTYQRTRIEDIASRLGLVPLAWLWQYPFLPA 191
Query: 143 ----------QDQSLLLQEMITNGINAITVKVAAMGLE 170
+D++ LL +M G +A VKVA+ L+
Sbjct: 192 PEARRQLGGEEDEAGLLTDMAAVGCSARIVKVASGALD 229
Score = 115 (45.5 bits), Expect = 4.8e-27, Sum P(3) = 4.8e-27
Identities = 40/115 (34%), Positives = 59/115 (51%)
Query: 357 VLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSRSTIEL-PLLEVGLGKAYIEVLVA 415
+ + + + M +F N YV EK P P+R+T+ L G+ V+
Sbjct: 429 IAFTTVLLRSMTDFPSMNGIYVSLF--EK-P-NPPARATVACGDRLPDGVNVMVSMVVDL 484
Query: 416 NDQSKRV-LHVQSISCWAPSCIGPYSQAT---LH--KEVLQMAGQLGLDPPTMTL 464
+ +R LHVQS S WAP+ IGPYSQA L + V+ +AGQ+ L+P +M L
Sbjct: 485 GPRVQRDGLHVQSRSYWAPANIGPYSQAISVPLQGTERVIYIAGQIPLEPASMDL 539
Score = 79 (32.9 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 142 KQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKEIAFLDPYLHK--LK--ESYGIN- 196
++D++ LL +M G +A VKVA+ L+ + L +++ L + +K + +G+
Sbjct: 201 EEDEAGLLTDMAAVGCSARIVKVASGALDE-EFLWGDVSDAGGGLRRRIVKGVKRFGMGG 259
Query: 197 -------VCGEGGEYETLTLDCPLFV-NARIVLDE 223
V GEGGEYETL +D P F+ RI + E
Sbjct: 260 GEDIRGAVLGEGGEYETLAVDGPEFLWRGRIEIGE 294
Score = 38 (18.4 bits), Expect = 4.1e-19, Sum P(3) = 4.1e-19
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 399 PLLEVGLGKAYIEVLVANDQSKRVLH--VQSISCWAPSCIGPYS----QATLH 445
PLL L YI + ++N VLH + +++ P I +S Q+ +H
Sbjct: 1043 PLLYPVLIPVYISLSLSNHDPSLVLHNILLALASIPPQAIPMHSSVHGQSVMH 1095
>ASPGD|ASPL0000094803 [details] [associations]
symbol:AN11886 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000374 Pfam:PF01148 Pfam:PF01042 GO:GO:0016020
EMBL:BN001307 Gene3D:3.40.50.620 InterPro:IPR014729
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
EMBL:AACD01000026 GO:GO:0016779 InterPro:IPR002761 Pfam:PF01902
eggNOG:COG0251 InterPro:IPR006175 RefSeq:XP_659257.1
ProteinModelPortal:Q5BCS7 EnsemblFungi:CADANIAT00008292
GeneID:2875381 KEGG:ani:AN1653.2 OrthoDB:EOG4PRX0F Uniprot:Q5BCS7
Length = 1685
Score = 194 (73.4 bits), Expect = 4.8e-27, Sum P(3) = 4.8e-27
Identities = 44/101 (43%), Positives = 64/101 (63%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANL----MPA------DDSV-----DELDS 45
+ V+AL+SGGKDS Y+++ CI+ GH++VALANL +PA +DS+ D++DS
Sbjct: 10 LNVIALISGGKDSLYSILHCIRNGHKVVALANLHPPPIPAISSNSDNDSIQPETADDIDS 69
Query: 46 YMYQTVGHQIIVSYAECMGLPLFRRRIHGSTRHQKLSYRMT 86
+MYQT+G +I Y E +G+PL+R I G YR T
Sbjct: 70 FMYQTIGWSVIPLYEEALGIPLYRAPIIGGAVDAGRVYRNT 110
Score = 141 (54.7 bits), Expect = 4.8e-27, Sum P(3) = 4.8e-27
Identities = 39/98 (39%), Positives = 53/98 (54%)
Query: 89 DEVEDMYILLNEVKRQIPSVTAVSSGAIASDYQRLRVESVCSRLGLVSLAYLWK------ 142
DE E + LL +V P AV +GAI S YQR R+E + SRLGLV LA+LW+
Sbjct: 132 DETESLIPLLRKVMAAHPEANAVCAGAILSTYQRTRIEDIASRLGLVPLAWLWQYPFLPA 191
Query: 143 ----------QDQSLLLQEMITNGINAITVKVAAMGLE 170
+D++ LL +M G +A VKVA+ L+
Sbjct: 192 PEARRQLGGEEDEAGLLTDMAAVGCSARIVKVASGALD 229
Score = 115 (45.5 bits), Expect = 4.8e-27, Sum P(3) = 4.8e-27
Identities = 40/115 (34%), Positives = 59/115 (51%)
Query: 357 VLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSRSTIEL-PLLEVGLGKAYIEVLVA 415
+ + + + M +F N YV EK P P+R+T+ L G+ V+
Sbjct: 429 IAFTTVLLRSMTDFPSMNGIYVSLF--EK-P-NPPARATVACGDRLPDGVNVMVSMVVDL 484
Query: 416 NDQSKRV-LHVQSISCWAPSCIGPYSQAT---LH--KEVLQMAGQLGLDPPTMTL 464
+ +R LHVQS S WAP+ IGPYSQA L + V+ +AGQ+ L+P +M L
Sbjct: 485 GPRVQRDGLHVQSRSYWAPANIGPYSQAISVPLQGTERVIYIAGQIPLEPASMDL 539
Score = 79 (32.9 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 142 KQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKEIAFLDPYLHK--LK--ESYGIN- 196
++D++ LL +M G +A VKVA+ L+ + L +++ L + +K + +G+
Sbjct: 201 EEDEAGLLTDMAAVGCSARIVKVASGALDE-EFLWGDVSDAGGGLRRRIVKGVKRFGMGG 259
Query: 197 -------VCGEGGEYETLTLDCPLFV-NARIVLDE 223
V GEGGEYETL +D P F+ RI + E
Sbjct: 260 GEDIRGAVLGEGGEYETLAVDGPEFLWRGRIEIGE 294
Score = 38 (18.4 bits), Expect = 4.1e-19, Sum P(3) = 4.1e-19
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 399 PLLEVGLGKAYIEVLVANDQSKRVLH--VQSISCWAPSCIGPYS----QATLH 445
PLL L YI + ++N VLH + +++ P I +S Q+ +H
Sbjct: 1043 PLLYPVLIPVYISLSLSNHDPSLVLHNILLALASIPPQAIPMHSSVHGQSVMH 1095
>FB|FBgn0086691 [details] [associations]
symbol:UK114 "UK114" species:7227 "Drosophila melanogaster"
[GO:0017148 "negative regulation of translation" evidence=ISS]
[GO:0006457 "protein folding" evidence=IDA] InterPro:IPR006056
Pfam:PF01042 GO:GO:0006457 EMBL:AE014134 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 GeneTree:ENSGT00420000029792
OMA:PYNQAVV InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
EMBL:AY119558 RefSeq:NP_609747.1 UniGene:Dm.12046 HSSP:P80601
SMR:Q9V3W0 MINT:MINT-1007857 STRING:Q9V3W0
EnsemblMetazoa:FBtr0080746 EnsemblMetazoa:FBtr0332376 GeneID:34897
KEGG:dme:Dmel_CG15261 UCSC:CG15261-RA CTD:34897 FlyBase:FBgn0086691
InParanoid:Q9V3W0 OrthoDB:EOG4KSN27 GenomeRNAi:34897 NextBio:790777
Uniprot:Q9V3W0
Length = 138
Score = 116 (45.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 436 IGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
+ PY+QA + + ++G LGLD TM L GGPT + ++AL+N EAV K + +
Sbjct: 18 VAPYNQAVVADRTVYVSGCLGLDKDTMKLVPGGPTEQAQKALENLEAVLKAADSGV 73
Score = 37 (18.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 549 SNLPKSALVEIKPILYVTDDSET 571
+ LP ALVEI+ I +T ET
Sbjct: 113 AKLPMDALVEIECIA-LTGSVET 134
>UNIPROTKB|P52758 [details] [associations]
symbol:HRSP12 "Ribonuclease UK114" species:9606 "Homo
sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006449 "regulation
of translational termination" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 EMBL:CH471060
GO:GO:0090305 GO:GO:0004519 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
GO:GO:0006449 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 CTD:10247 HOVERGEN:HBG003597
OrthoDB:EOG41JZDQ EMBL:X95384 EMBL:AY026764 EMBL:CR456844
EMBL:CR541652 EMBL:BC010280 EMBL:BC012592 EMBL:BC093059
IPI:IPI00005038 RefSeq:NP_005827.1 UniGene:Hs.18426 PDB:1ONI
PDBsum:1ONI ProteinModelPortal:P52758 SMR:P52758 IntAct:P52758
STRING:P52758 PhosphoSite:P52758 DMDM:1717975 UCD-2DPAGE:P52758
PaxDb:P52758 PeptideAtlas:P52758 PRIDE:P52758 DNASU:10247
Ensembl:ENST00000254878 GeneID:10247 KEGG:hsa:10247 UCSC:uc003yii.1
GeneCards:GC08M099183 HGNC:HGNC:16897 HPA:HPA022856 HPA:HPA023489
MIM:602487 neXtProt:NX_P52758 PharmGKB:PA134890258
InParanoid:P52758 PhylomeDB:P52758 EvolutionaryTrace:P52758
GenomeRNAi:10247 NextBio:38824 ArrayExpress:P52758 Bgee:P52758
CleanEx:HS_HRSP12 Genevestigator:P52758 GermOnline:ENSG00000132541
Uniprot:P52758
Length = 137
Score = 129 (50.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP IGPYSQA L + ++GQ+G+DP + L +GG E +QAL+N + K C
Sbjct: 14 APGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKAAGCDF 73
Query: 492 S 492
+
Sbjct: 74 T 74
>UNIPROTKB|Q8U308 [details] [associations]
symbol:yjgF "Enamine/imine deaminase" species:186497
"Pyrococcus furiosus DSM 3638" [GO:0019239 "deaminase activity"
evidence=IDA] InterPro:IPR006056 Pfam:PF01042 GO:GO:0005737
GO:GO:0009636 GO:GO:0016787 GO:GO:0019239 EMBL:AE009950
GenomeReviews:AE009950_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 GO:GO:0009097 eggNOG:COG0251 InterPro:IPR006175
PROSITE:PS01094 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567 OMA:AGNTIYL
RefSeq:NP_578397.1 HSSP:P39330 ProteinModelPortal:Q8U308 SMR:Q8U308
PRIDE:Q8U308 EnsemblBacteria:EBPYRT00000005430 GeneID:1468513
KEGG:pfu:PF0668 ProtClustDB:CLSK689587 Uniprot:Q8U308
Length = 126
Score = 104 (41.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP IGPYSQA L +AGQ+ +DP T + G + Q L+N +A+ + S+
Sbjct: 10 APKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKAQTRQVLENIKAILEAAGYSL 69
Query: 492 STSAIYFVVY 501
T + VY
Sbjct: 70 -TDVVKVTVY 78
Score = 90 (36.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 337 RVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSRSTI 396
R VL+ I++ L G+ V+ + +Y+ DMN+FA NE Y ++ K P+R+ +
Sbjct: 52 RQVLENIKAILEAAGYSLTDVVKVTVYLKDMNDFAKMNEVYAEYFGESK-----PARAAV 106
Query: 397 ELPLL 401
E+ L
Sbjct: 107 EVSRL 111
Score = 47 (21.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 546 VLASNLPKSALVEIKPILY 564
V S LPK L+EI+ I Y
Sbjct: 106 VEVSRLPKDVLIEIEAIAY 124
>UNIPROTKB|Q3T114 [details] [associations]
symbol:HRSP12 "Ribonuclease UK114" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] InterPro:IPR006056 Pfam:PF01042 GO:GO:0005739
GO:GO:0005634 GO:GO:0090305 GO:GO:0004519 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 GeneTree:ENSGT00420000029792
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL EMBL:BC102164 IPI:IPI00686803
RefSeq:NP_001029380.1 UniGene:Bt.1556 ProteinModelPortal:Q3T114
SMR:Q3T114 STRING:Q3T114 PRIDE:Q3T114 Ensembl:ENSBTAT00000016718
GeneID:504390 KEGG:bta:504390 CTD:10247 HOVERGEN:HBG003597
InParanoid:Q3T114 OrthoDB:EOG41JZDQ NextBio:20866637 Uniprot:Q3T114
Length = 137
Score = 126 (49.4 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP+ IGPYSQA L + ++GQLG+DP + L GG E +QAL N + K C
Sbjct: 14 APAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVAEEAKQALTNIGEILKAAGCDF 73
Query: 492 S 492
+
Sbjct: 74 T 74
>UNIPROTKB|F1S0M2 [details] [associations]
symbol:HRSP12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005739 GO:GO:0005634 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL EMBL:CU234130 RefSeq:XP_001928988.1
UniGene:Ssc.8236 Ensembl:ENSSSCT00000006670 GeneID:100158002
KEGG:ssc:100158002 Uniprot:F1S0M2
Length = 137
Score = 125 (49.1 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP+ IGPYSQA L + ++GQ+G+DP + L GG E +QAL N + K C
Sbjct: 14 APAAIGPYSQAVLVDRTIYISGQIGMDPASGQLVPGGVVEEAKQALTNMGEILKAAGCDF 73
Query: 492 S 492
+
Sbjct: 74 T 74
>TIGR_CMR|CHY_2460 [details] [associations]
symbol:CHY_2460 "endoribonuclease L-PSP family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004521 "endoribonuclease activity" evidence=ISS] [GO:0006402
"mRNA catabolic process" evidence=ISS] InterPro:IPR006056
Pfam:PF01042 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567 OMA:VEMDGIM
RefSeq:YP_361254.1 ProteinModelPortal:Q3A9D0 SMR:Q3A9D0
STRING:Q3A9D0 GeneID:3726216 KEGG:chy:CHY_2460 PATRIC:21277985
BioCyc:CHYD246194:GJCN-2459-MONOMER Uniprot:Q3A9D0
Length = 125
Score = 105 (42.0 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQN 479
AP IGPYSQA L ++GQ+G++P T L GG +++QA++N
Sbjct: 10 APQAIGPYSQAIKVNGFLFVSGQIGINPQTGELVPGGVEAQIKQAMEN 57
Score = 42 (19.8 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 546 VLASNLPKSALVEIKPI 562
+ ++LPK ALVE++ +
Sbjct: 106 IAVASLPKGALVEVEVV 122
>MGI|MGI:1095401 [details] [associations]
symbol:Hrsp12 "heat-responsive protein 12" species:10090
"Mus musculus" [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR006056 Pfam:PF01042 MGI:MGI:1095401
GO:GO:0005739 GO:GO:0005634 GO:GO:0090305 GO:GO:0004519
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:AGNTIYL
CTD:10247 HOVERGEN:HBG003597 OrthoDB:EOG41JZDQ EMBL:U50631
EMBL:BC092375 EMBL:BC125590 EMBL:BC125592 IPI:IPI00130640
RefSeq:NP_032313.2 UniGene:Mm.143977 ProteinModelPortal:P52760
SMR:P52760 IntAct:P52760 STRING:P52760 PhosphoSite:P52760
SWISS-2DPAGE:P52760 PaxDb:P52760 PRIDE:P52760
Ensembl:ENSMUST00000022946 GeneID:15473 KEGG:mmu:15473
UCSC:uc007vlt.2 InParanoid:Q569N4 NextBio:288314 Bgee:P52760
CleanEx:MM_HRSP12 Genevestigator:P52760
GermOnline:ENSMUSG00000022323 Uniprot:P52760
Length = 135
Score = 121 (47.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP+ IGPYSQA + ++GQ+GLDP + L GG E +QAL+N + K C
Sbjct: 14 APAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGEILKAAGCDF 73
Query: 492 S 492
+
Sbjct: 74 N 74
>RGD|70940 [details] [associations]
symbol:Hrsp12 "heat-responsive protein 12" species:10116 "Rattus
norvegicus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005777 "peroxisome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR006056 Pfam:PF01042 RGD:70940
GO:GO:0005739 GO:GO:0005634 GO:GO:0005777 GO:GO:0090305
GO:GO:0004519 Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 CTD:10247 HOVERGEN:HBG003597 OrthoDB:EOG41JZDQ
EMBL:D49363 EMBL:X70825 EMBL:AF015949 EMBL:BC078779 IPI:IPI00231292
PIR:S30349 RefSeq:NP_113902.1 UniGene:Rn.6987 PDB:1QAH PDBsum:1QAH
ProteinModelPortal:P52759 SMR:P52759 STRING:P52759
PhosphoSite:P52759 PRIDE:P52759 GeneID:65151 KEGG:rno:65151
UCSC:RGD:70940 InParanoid:P52759 EvolutionaryTrace:P52759
NextBio:613985 Genevestigator:P52759 GermOnline:ENSRNOG00000005437
Uniprot:P52759
Length = 137
Score = 118 (46.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP+ IG YSQA L + ++GQ+G+DP + L GG E +QAL+N + K C
Sbjct: 14 APAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGEILKAAGCDF 73
Query: 492 S 492
+
Sbjct: 74 T 74
>UNIPROTKB|Q3Z9W3 [details] [associations]
symbol:DET0238 "Putative uncharacterized protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000027 GenomeReviews:CP000027_GR Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG2102 InterPro:IPR002761 Pfam:PF01902
TIGRFAMs:TIGR00290 HOGENOM:HOG000229449 KO:K06927
RefSeq:YP_180986.1 ProteinModelPortal:Q3Z9W3 STRING:Q3Z9W3
GeneID:3230429 KEGG:det:DET0238 PATRIC:21607547 OMA:VFDGPIF
ProtClustDB:CLSK837559 BioCyc:DETH243164:GJNF-238-MONOMER
Uniprot:Q3Z9W3
Length = 250
Score = 134 (52.2 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 55/212 (25%), Positives = 103/212 (48%)
Query: 8 SGGKDSCYAMMKCIQYGHQIVALANLMPADDSVDELDSYMYQTVGHQIIVSYAECMGLPL 67
SGGKD ++ + ++ G+ + LA++ + L + + ++++S AE +G+PL
Sbjct: 9 SGGKDCSLSLYRALKDGYDVRYLASMFT--EGTGRLYPHHFTP---ELLISQAEAIGIPL 63
Query: 68 FRRRIHGSTRHQKLSYRMTPGDEVEDMYI-LLNEVKRQIPSVTA---VSSGAIASDYQRL 123
++++ T G E + YI +L + + +V VS G + R+
Sbjct: 64 ------------EVTW--TSGQEYTNNYIKMLKGFREEGITVAVFGDVSVGNPDALEHRM 109
Query: 124 RVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKH-LGKEIAFL 182
VE VC G+ + LW +D+ ++ ++I +G T+ VAA GK LG+++
Sbjct: 110 WVERVCQAAGMRVVLPLWDEDRESIIGDLIDSGFE--TLIVAADNTNLGKGWLGRKLD-- 165
Query: 183 DPYLHKLKESYGINVCGEGGEYETLTLDCPLF 214
+ +LK + G+ G Y TLT+D P+F
Sbjct: 166 NELFEELKLLNASSPDGKVGLYHTLTVDGPIF 197
>TIGR_CMR|DET_0238 [details] [associations]
symbol:DET_0238 "conserved hypothetical protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000027 GenomeReviews:CP000027_GR Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG2102 InterPro:IPR002761 Pfam:PF01902
TIGRFAMs:TIGR00290 HOGENOM:HOG000229449 KO:K06927
RefSeq:YP_180986.1 ProteinModelPortal:Q3Z9W3 STRING:Q3Z9W3
GeneID:3230429 KEGG:det:DET0238 PATRIC:21607547 OMA:VFDGPIF
ProtClustDB:CLSK837559 BioCyc:DETH243164:GJNF-238-MONOMER
Uniprot:Q3Z9W3
Length = 250
Score = 134 (52.2 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 55/212 (25%), Positives = 103/212 (48%)
Query: 8 SGGKDSCYAMMKCIQYGHQIVALANLMPADDSVDELDSYMYQTVGHQIIVSYAECMGLPL 67
SGGKD ++ + ++ G+ + LA++ + L + + ++++S AE +G+PL
Sbjct: 9 SGGKDCSLSLYRALKDGYDVRYLASMFT--EGTGRLYPHHFTP---ELLISQAEAIGIPL 63
Query: 68 FRRRIHGSTRHQKLSYRMTPGDEVEDMYI-LLNEVKRQIPSVTA---VSSGAIASDYQRL 123
++++ T G E + YI +L + + +V VS G + R+
Sbjct: 64 ------------EVTW--TSGQEYTNNYIKMLKGFREEGITVAVFGDVSVGNPDALEHRM 109
Query: 124 RVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKH-LGKEIAFL 182
VE VC G+ + LW +D+ ++ ++I +G T+ VAA GK LG+++
Sbjct: 110 WVERVCQAAGMRVVLPLWDEDRESIIGDLIDSGFE--TLIVAADNTNLGKGWLGRKLD-- 165
Query: 183 DPYLHKLKESYGINVCGEGGEYETLTLDCPLF 214
+ +LK + G+ G Y TLT+D P+F
Sbjct: 166 NELFEELKLLNASSPDGKVGLYHTLTVDGPIF 197
>TIGR_CMR|GSU_2235 [details] [associations]
symbol:GSU_2235 "endoribonuclease L-PSP, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 InterPro:IPR006175
PROSITE:PS01094 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567 OMA:AGNTIYL
RefSeq:NP_953284.1 ProteinModelPortal:Q74AW4 GeneID:2687529
KEGG:gsu:GSU2235 PATRIC:22027325 ProtClustDB:CLSK924586
BioCyc:GSUL243231:GH27-2207-MONOMER Uniprot:Q74AW4
Length = 126
Score = 98 (39.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAV 483
AP IGPYSQA L ++GQ+ LDP T + +G TV+ + + N AV
Sbjct: 10 APKAIGPYSQAVRAGGFLFLSGQIPLDPATGEMVDGDITVQTMRVMDNMAAV 61
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 546 VLASNLPKSALVEIKPI 562
V LP+ ALVEI+ I
Sbjct: 106 VEVKGLPRGALVEIEAI 122
>ZFIN|ZDB-GENE-040718-315 [details] [associations]
symbol:hrsp12 "heat-responsive protein 12"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006056 Pfam:PF01042 ZFIN:ZDB-GENE-040718-315
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 GeneTree:ENSGT00420000029792
HOGENOM:HOG000267215 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
OMA:AGNTIYL CTD:10247 HOVERGEN:HBG003597 OrthoDB:EOG41JZDQ
EMBL:BX293540 EMBL:CR749175 EMBL:BC079492 IPI:IPI00501400
RefSeq:NP_001012315.1 UniGene:Dr.75381 SMR:Q6AXL2 STRING:Q6AXL2
Ensembl:ENSDART00000052097 GeneID:436849 KEGG:dre:436849
InParanoid:Q6AXL2 NextBio:20831280 Uniprot:Q6AXL2
Length = 135
Score = 111 (44.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 420 KRVLHVQSISCWAPSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQN 479
++++H + AP+ IGPYSQA L + ++GQLG+DP + L G + +QAL N
Sbjct: 6 RKIIHTAA----APAAIGPYSQAVLVDRTMYISGQLGMDPASGQLA-AGVQAQTKQALIN 60
Query: 480 SEAVAKCFNC 489
+ K C
Sbjct: 61 IGEILKAAGC 70
>UNIPROTKB|E1C7E1 [details] [associations]
symbol:HRSP12 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005739 GO:GO:0005634 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL EMBL:AADN02024998 EMBL:AADN02024997
IPI:IPI00814279 ProteinModelPortal:E1C7E1
Ensembl:ENSGALT00000029404 Uniprot:E1C7E1
Length = 132
Score = 110 (43.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP+ +G YSQA L + +AGQ+G++P L +GG E +QA +N + K C
Sbjct: 14 APAPLGAYSQAVLVDRTMYIAGQIGIEPSNGQLVSGGIKEETKQAFKNLGEILKAAGCDY 73
Query: 492 S 492
S
Sbjct: 74 S 74
>TIGR_CMR|CPS_4974 [details] [associations]
symbol:CPS_4974 "putative endoribonuclease L-PSP"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000294
"nuclear-transcribed mRNA catabolic process, endonucleolytic
cleavage-dependent decay" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] InterPro:IPR006056
Pfam:PF01042 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 KO:K07567 RefSeq:YP_271613.1
ProteinModelPortal:Q47UB0 STRING:Q47UB0 GeneID:3521216
KEGG:cps:CPS_4974 PATRIC:21472741 OMA:ENHIYIS
BioCyc:CPSY167879:GI48-4975-MONOMER Uniprot:Q47UB0
Length = 129
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAK 485
APS IGPYSQA + ++GQ+ L TMT+ GG + EQ +N AV +
Sbjct: 10 APSAIGPYSQAVKVNNTVYLSGQIPLVAETMTVIEGGFAEQAEQVFKNLVAVCE 63
>UNIPROTKB|P0AGL2 [details] [associations]
symbol:tdcF "predicted enamine/imine deaminase"
species:83333 "Escherichia coli K-12" [GO:0042802 "identical
protein binding" evidence=IDA] [GO:0070689 "L-threonine catabolic
process to propionate" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006566 "threonine metabolic process"
evidence=IDA] InterPro:IPR006056 UniPathway:UPA00052 Pfam:PF01042
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0016787
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 OMA:PYNQAVV InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 GO:GO:0006566 GO:GO:0070689
KO:K07567 ProtClustDB:PRK11401 PIR:F65100 RefSeq:NP_417583.4
RefSeq:YP_491302.1 PDB:2UYJ PDB:2UYK PDB:2UYN PDB:2UYP PDBsum:2UYJ
PDBsum:2UYK PDBsum:2UYN PDBsum:2UYP ProteinModelPortal:P0AGL2
SMR:P0AGL2 DIP:DIP-48213N EnsemblBacteria:EBESCT00000001141
EnsemblBacteria:EBESCT00000014312 GeneID:12930270 GeneID:947624
KEGG:ecj:Y75_p3036 KEGG:eco:b3113 PATRIC:32121642 EchoBASE:EB2611
EcoGene:EG12757 BioCyc:EcoCyc:G7626-MONOMER
BioCyc:ECOL316407:JW5521-MONOMER EvolutionaryTrace:P0AGL2
Genevestigator:P0AGL2 Uniprot:P0AGL2
Length = 129
Score = 102 (41.0 bits), Expect = 0.00021, P = 0.00021
Identities = 24/90 (26%), Positives = 49/90 (54%)
Query: 324 ETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITH 383
+T + A + D R+ L+ +++ +V G G ++ + ++I+D+N+FA NE Y +F
Sbjct: 38 QTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDE 97
Query: 384 EKCPCGVPSRSTIELPLLEVGLGKAYIEVL 413
+ P+RS +++ L + K IE +
Sbjct: 98 HQAT--YPTRSCVQVARLPKDV-KLEIEAI 124
>UNIPROTKB|P0AGL3 [details] [associations]
symbol:tdcF "Putative reactive intermediate deaminase TdcF"
species:199310 "Escherichia coli CFT073" [GO:0006566 "threonine
metabolic process" evidence=ISS] InterPro:IPR006056
UniPathway:UPA00052 Pfam:PF01042 GO:GO:0016787 EMBL:AE014075
GenomeReviews:AE014075_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 OMA:PYNQAVV InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 GO:GO:0006566 GO:GO:0070689
KO:K07567 RefSeq:NP_755738.1 ProteinModelPortal:P0AGL3 SMR:P0AGL3
EnsemblBacteria:EBESCT00000041583 GeneID:1040096 KEGG:ecc:c3871
PATRIC:18285526 ProtClustDB:PRK11401 Uniprot:P0AGL3
Length = 129
Score = 102 (41.0 bits), Expect = 0.00021, P = 0.00021
Identities = 24/90 (26%), Positives = 49/90 (54%)
Query: 324 ETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITH 383
+T + A + D R+ L+ +++ +V G G ++ + ++I+D+N+FA NE Y +F
Sbjct: 38 QTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDE 97
Query: 384 EKCPCGVPSRSTIELPLLEVGLGKAYIEVL 413
+ P+RS +++ L + K IE +
Sbjct: 98 HQAT--YPTRSCVQVARLPKDV-KLEIEAI 124
>UNIPROTKB|P0AGL4 [details] [associations]
symbol:tdcF "Putative reactive intermediate deaminase TdcF"
species:623 "Shigella flexneri" [GO:0006566 "threonine metabolic
process" evidence=ISS] InterPro:IPR006056 UniPathway:UPA00052
Pfam:PF01042 EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0016787 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
GO:GO:0006566 GO:GO:0070689 KO:K07567 ProtClustDB:PRK11401
RefSeq:NP_708917.2 RefSeq:NP_838627.1 ProteinModelPortal:P0AGL4
SMR:P0AGL4 EnsemblBacteria:EBESCT00000085096
EnsemblBacteria:EBESCT00000092667 GeneID:1027187 GeneID:1079601
KEGG:sfl:SF3153 KEGG:sfx:S3365 PATRIC:18708466 Uniprot:P0AGL4
Length = 129
Score = 102 (41.0 bits), Expect = 0.00021, P = 0.00021
Identities = 24/90 (26%), Positives = 49/90 (54%)
Query: 324 ETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITH 383
+T + A + D R+ L+ +++ +V G G ++ + ++I+D+N+FA NE Y +F
Sbjct: 38 QTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDE 97
Query: 384 EKCPCGVPSRSTIELPLLEVGLGKAYIEVL 413
+ P+RS +++ L + K IE +
Sbjct: 98 HQAT--YPTRSCVQVARLPKDV-KLEIEAI 124
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 742 742 0.00088 121 3 11 22 0.37 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 623 (66 KB)
Total size of DFA: 387 KB (2189 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 60.22u 0.17s 60.39t Elapsed: 00:00:03
Total cpu time: 60.22u 0.17s 60.39t Elapsed: 00:00:03
Start: Tue May 21 03:57:27 2013 End: Tue May 21 03:57:30 2013