BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004613
(742 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9USQ7|DPH6_SCHPO Diphthine--ammonia ligase OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=mug71 PE=1 SV=1
Length = 606
Score = 310 bits (793), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 190/498 (38%), Positives = 280/498 (56%), Gaps = 37/498 (7%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSVDELDSYMYQTVGHQIIVSYA 60
MKV+ L+SGGKDSC+ +M C+ GH++VALANL P +D DE+DS+MYQ+VGH +I YA
Sbjct: 1 MKVLGLISGGKDSCFNLMHCVSLGHEVVALANLHP-EDGKDEIDSFMYQSVGHDVIPLYA 59
Query: 61 ECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIASDY 120
EC LPL+R +I G + +Q L Y+ T DE ED+Y L+ V P + AVS+GAI S Y
Sbjct: 60 ECFDLPLYREKIGGQSINQNLDYQFTEKDETEDLYRLIKRVLTNHPDLEAVSTGAILSTY 119
Query: 121 QRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKEIA 180
QR RVE+VC RLGL SL++LW++DQ LL +M+ +G+NAI +KVAA+GL K LGK +A
Sbjct: 120 QRTRVENVCKRLGLKSLSFLWQKDQEKLLNDMVVSGLNAILIKVAAIGLT-RKDLGKSLA 178
Query: 181 FLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVGV- 239
+ L L + + ++ CGEGGEYETL LDCPLF RIVL + +VV HS+ + + V
Sbjct: 179 EMQDKLLTLNKKFELHPCGEGGEYETLVLDCPLF-KKRIVLTDKEVVEHSSGEVCYLKVK 237
Query: 240 --------LHPLAFHLEYKAGSASLSGSRETE--NSIQEKTGLVFEVQGECPQNSEAMCL 289
P++ E + L G + ++I +K L+ + Q E P + + +
Sbjct: 238 ACVKDKPEWQPISLKSEL-VPNEELLGEEYSHIYHTISKKYELI-DDQEETP--TSLIPI 293
Query: 290 PVAEVTDSVEVTDNRLNISRRKKDNTFSICCWLQETQKTSAGLLDDLRVVLKQIESKLVR 349
P+ E + ++K +F + + T+ + + + + L
Sbjct: 294 PLRES-------------AFQQKKGSFLVLGNVVATKGSYNTFQGEAESAINNLNELLGT 340
Query: 350 YGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSRSTIELPLLEVGLGKAY 409
YG+ +V ++ + +S M++FA N Y K+ PSRS + PL +
Sbjct: 341 YGYSNKNVYFVTVILSSMSKFAEFNSVYNKYFDF----TNPPSRSCVAAPL--ASEYRIV 394
Query: 410 IEVLVANDQSKRVLHVQSISCWAPSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGP 469
+ +V + KR LHVQ S WAP+ IGPYSQ+ V+ ++GQ+GL P M L
Sbjct: 395 MSCIVGDVTEKRALHVQGQSYWAPANIGPYSQSICANGVVFISGQIGLIPSVMELKLHDK 454
Query: 470 TVELEQALQNSEAVAKCF 487
E+ ALQ++ VAK
Sbjct: 455 IFEMVLALQHANRVAKAM 472
>sp|A2RV01|DPH6_DANRE Diphthine--ammonia ligase OS=Danio rerio GN=atpbd4 PE=2 SV=1
Length = 255
Score = 303 bits (776), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/251 (59%), Positives = 186/251 (74%), Gaps = 3/251 (1%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSV-DELDSYMYQTVGHQIIVSY 59
M+VV L+SGGKDSC+ M++C+ GH IVALANL PAD + DELDSYMYQTVGHQ +
Sbjct: 1 MRVVGLISGGKDSCFNMLQCVSAGHSIVALANLRPADHAASDELDSYMYQTVGHQAVDLI 60
Query: 60 AECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIASD 119
AE MGLPL+RR I GS+ H Y T GDEVED+Y LL VK ++ V VS GAI SD
Sbjct: 61 AEAMGLPLYRRTIEGSSVHIDREYSPTDGDEVEDLYQLLKHVKEEM-HVDGVSVGAILSD 119
Query: 120 YQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKEI 179
YQR+RVE+VC+RL L LAYLW++DQ+ LL EMI++G++AI +KVAA GL P KHLGK +
Sbjct: 120 YQRVRVENVCARLQLQPLAYLWRRDQAALLSEMISSGLHAILIKVAAFGLHPDKHLGKSL 179
Query: 180 AFLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVGV 239
A ++ YLH+L E YG+++CGEGGEYET TLDCPLF +I++D + V+HS D+ APVG
Sbjct: 180 AEMELYLHELSEKYGVHICGEGGEYETFTLDCPLF-KKKIIIDATETVIHSDDAFAPVGF 238
Query: 240 LHPLAFHLEYK 250
L H E K
Sbjct: 239 LRFTKMHTEDK 249
>sp|Q7L8W6|DPH6_HUMAN Diphthine--ammonia ligase OS=Homo sapiens GN=ATPBD4 PE=1 SV=3
Length = 267
Score = 298 bits (764), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 150/255 (58%), Positives = 186/255 (72%), Gaps = 4/255 (1%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSV--DELDSYMYQTVGHQIIVS 58
M+V AL+SGGKDSCY MM+CI GHQIVALANL PA++ V DELDSYMYQTVGH I
Sbjct: 1 MRVAALISGGKDSCYNMMQCIAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDL 60
Query: 59 YAECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIAS 118
YAE M LPL+RR I G + + Y GDEVED+Y LL VK + V +S GAI S
Sbjct: 61 YAEAMALPLYRRTIRGRSLDTRQVYTKCEGDEVEDLYELLKLVKEK-EEVEGISVGAILS 119
Query: 119 DYQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKE 178
DYQR+RVE+VC RL L LAYLW+++Q LL+EMI++ I A+ +KVAA+GL+P KHLGK
Sbjct: 120 DYQRIRVENVCKRLNLQPLAYLWQRNQEDLLREMISSNIQAMIIKVAALGLDPDKHLGKT 179
Query: 179 IAFLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVG 238
+ ++PYL +L + YG++VCGEGGEYET TLDCPLF +I++D +VV+HSAD+ APV
Sbjct: 180 LDQMEPYLIELSKKYGVHVCGEGGEYETFTLDCPLF-KKKIIVDSSEVVIHSADAFAPVA 238
Query: 239 VLHPLAFHLEYKAGS 253
L L HLE K S
Sbjct: 239 YLRFLELHLEDKVSS 253
>sp|Q5M9F5|DPH6_RAT Diphthine--ammonia ligase OS=Rattus norvegicus GN=Atpbd4 PE=2 SV=1
Length = 267
Score = 298 bits (762), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/269 (57%), Positives = 188/269 (69%), Gaps = 6/269 (2%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSV--DELDSYMYQTVGHQIIVS 58
M+V AL+SGGKDSCY MM+CI GHQIVALANL P D+ V DELDSYMYQTVGH I
Sbjct: 1 MRVAALISGGKDSCYNMMRCIAEGHQIVALANLRPDDNQVESDELDSYMYQTVGHHAIDL 60
Query: 59 YAECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIAS 118
YAE M LPL+RR I G + Y GDEVED+Y LL VK + + VS GAI S
Sbjct: 61 YAEAMALPLYRRTIRGRSLETGRVYTRCEGDEVEDLYELLKLVKEK-EEIEGVSVGAILS 119
Query: 119 DYQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKE 178
DYQR+RVE+VC RL L LAYLW+++Q LL+EMI + I AI +KVAA+GL+P KHLGK
Sbjct: 120 DYQRVRVENVCKRLNLQPLAYLWQRNQEDLLREMIASNIEAIIIKVAALGLDPDKHLGKT 179
Query: 179 IAFLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVG 238
+ ++PYL +L + YG++VCGEGGEYET TLDCPLF +IV+D + V+HSAD+ APV
Sbjct: 180 LGEMEPYLLELSKKYGVHVCGEGGEYETFTLDCPLF-KKKIVVDTSEAVIHSADAFAPVA 238
Query: 239 VLHPLAFHLEYKAGSASLSGSRETENSIQ 267
L HLE K +S+ G ET + I
Sbjct: 239 YLRLSGLHLEEKV--SSVPGDDETTSYIH 265
>sp|Q9CQ28|DPH6_MOUSE Diphthine--ammonia ligase OS=Mus musculus GN=Atpbd4 PE=2 SV=1
Length = 267
Score = 296 bits (758), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 154/269 (57%), Positives = 187/269 (69%), Gaps = 6/269 (2%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSV--DELDSYMYQTVGHQIIVS 58
M+V AL+SGGKDSCY MM+CI GHQIVALANL P ++ V DELDSYMYQTVGH I
Sbjct: 1 MRVAALISGGKDSCYNMMQCIAEGHQIVALANLRPDENQVESDELDSYMYQTVGHHAIDL 60
Query: 59 YAECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIAS 118
YAE M LPL+RR I G + Y GDEVED+Y LL VK + + VS GAI S
Sbjct: 61 YAEAMALPLYRRAIRGRSLETGRVYTQCEGDEVEDLYELLKLVKEK-EEIEGVSVGAILS 119
Query: 119 DYQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKE 178
DYQR RVE+VC RL L LAYLW+++Q LL+EMI + I AI +KVAA+GL+P KHLGK
Sbjct: 120 DYQRGRVENVCKRLNLQPLAYLWQRNQEDLLREMIASNIKAIIIKVAALGLDPDKHLGKT 179
Query: 179 IAFLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVG 238
+ ++PYL +L + YG++VCGEGGEYET TLDCPLF +IV+D + V+HSAD+ APV
Sbjct: 180 LVEMEPYLLELSKKYGVHVCGEGGEYETFTLDCPLF-KKKIVVDSSEAVMHSADAFAPVA 238
Query: 239 VLHPLAFHLEYKAGSASLSGSRETENSIQ 267
L HLE K +S+ ET NSI
Sbjct: 239 YLRLSRLHLEEKV--SSVPADDETANSIH 265
>sp|Q2HJF5|DPH6_BOVIN Diphthine--ammonia ligase OS=Bos taurus GN=ATPBD4 PE=2 SV=1
Length = 267
Score = 296 bits (758), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/252 (59%), Positives = 183/252 (72%), Gaps = 4/252 (1%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSV--DELDSYMYQTVGHQIIVS 58
M+V AL+SGGKDSCY MM+C+ GHQIVALANL PA++ V DELDSYMYQTVGH I
Sbjct: 1 MRVAALISGGKDSCYNMMQCVAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDL 60
Query: 59 YAECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIAS 118
YAE M LPL+RR I G + Y GDEVED+Y LL VK + V +S GAI S
Sbjct: 61 YAEAMALPLYRRTIRGKSVDTGPVYTKCEGDEVEDLYELLKLVKEK-EEVEGISVGAILS 119
Query: 119 DYQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKHLGKE 178
DYQR+RVE+VC RL L LAYLW+++Q LLQEMI++ I AI +KVAA+GL+P KHLGK
Sbjct: 120 DYQRVRVENVCKRLNLQPLAYLWQRNQEDLLQEMISSNIQAIIIKVAALGLDPDKHLGKP 179
Query: 179 IAFLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLHSADSIAPVG 238
+ ++PYL +L + YG++VCGEGGEYET TLDCPLF +I++D +VV HSAD+ APV
Sbjct: 180 LDQMEPYLLELSKKYGVHVCGEGGEYETFTLDCPLF-KKKIIVDSSEVVTHSADAFAPVA 238
Query: 239 VLHPLAFHLEYK 250
L L HLE K
Sbjct: 239 YLRFLELHLEDK 250
>sp|Q12429|DPH6_YEAST Diphthine--ammonia ligase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DPH6 PE=1 SV=1
Length = 685
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 314/625 (50%), Gaps = 97/625 (15%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSVDELDSYMYQTVGHQIIVSYA 60
MK +AL+SGGKDS Y + C++ H+++AL N+ P + ELDS+M+QTVGH +I Y+
Sbjct: 1 MKFIALISGGKDSFYNIFHCLKNNHELIALGNIYPKESEEQELDSFMFQTVGHDLIDYYS 60
Query: 61 ECMGLPLFRRRI-HGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIASD 119
+C+G+PLFRR I ++ + +L+Y T DE+E+++ LL VK +IP + AVS GAI S
Sbjct: 61 KCIGVPLFRRSILRNTSNNVELNYTATQDDEIEELFELLRTVKDKIPDLEAVSVGAILSS 120
Query: 120 YQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMI---------------TNGINAITVKV 164
YQR RVE+VCSRLGLV L+YLW++DQ+ L+ EM N +A +KV
Sbjct: 121 YQRTRVENVCSRLGLVVLSYLWQRDQAELMGEMCLMSKDVNNVENDTNSGNKFDARIIKV 180
Query: 165 AAMGLEPGKHLGKEIAFLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEF 224
AA+GL KHLG + + P L KL + Y +++CGEGGE+ET+ LD P F + + L +
Sbjct: 181 AAIGLNE-KHLGMSLPMMQPVLQKLNQLYQVHICGEGGEFETMVLDAPFFQHGYLELID- 238
Query: 225 QVVLHSADSIAPVGVLHPLAFHLEYKAGSASLSGSRET----------ENSIQEKTGLVF 274
++ +D G +H ++++ + S S N+ Q+ T +
Sbjct: 239 --IVKCSD-----GEVHNARLKVKFQPRNLSKSFLLNQLDQLPVPSIFGNNWQDLTQNLP 291
Query: 275 EVQGECPQNSEAMCLPVAEVTDSVEVTDNRLNISRRKKDNTFSICCWLQETQKTSAGLLD 334
+ Q + + + A ++ T+++L IS + + ++ +K S +
Sbjct: 292 KQQAKTGEQRFENHMSNALPQTTINKTNDKLYISNLQSRKSETV-------EKQSEDIFT 344
Query: 335 DLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSRS 394
+L +L +++ R H+L L I DM+ F N+ Y +F+ K PSR+
Sbjct: 345 ELADILHS--NQIPR-----NHILSASLLIRDMSNFGKINKIYNEFLDLSKYGPLPPSRA 397
Query: 395 TIELPLL-EVGLGKAYIEVLVAN------DQSKRVLHVQSISCWAPSCIGPYSQAT-LHK 446
+ L E + + V V N +++K LHVQ S WAP IGPYSQ+T L+
Sbjct: 398 CVGSKCLPEDCHVQLSVVVDVKNTGKEKINKNKGGLHVQGRSYWAPCNIGPYSQSTWLND 457
Query: 447 EVLQ---MAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKC--------FNCSISTSA 495
+ Q ++GQ+GL P +M + T ++ ALQ+ + + + C IS +
Sbjct: 458 DANQVSFISGQIGLVPQSMEILGTPLTDQIVLALQHFDTLCETIGAQEKLLMTCYISDES 517
Query: 496 IY------FVVYCSTYVASSERLKIQEKLDAFLKQMRVWHFEERSMSKVLDPIFLFVLAS 549
+ + YCS S+ +W + + K L + V S
Sbjct: 518 VLDSVIKTWAFYCSNMNHRSD----------------LWMDKSDDVEKCL----VLVKIS 557
Query: 550 NLPKSALVEIKPIL---YVTDDSET 571
LP+ A+ E + + DD+++
Sbjct: 558 ELPRGAVAEFGGVTCKRLIVDDNDS 582
>sp|Q57990|Y570_METJA Uncharacterized protein MJ0570 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0570 PE=4 SV=1
Length = 223
Score = 98.6 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 113/232 (48%), Gaps = 29/232 (12%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVALANLMPADDSVDELDSYMYQTVGHQIIVSYA 60
MKV L SGGKDS YA+ ++ G + L N+ + +SYM+ + A
Sbjct: 1 MKVAVLYSGGKDSNYALYWALKEGFDVKYLVNV-----ESENKESYMFHIPNVHLTELSA 55
Query: 61 ECMGLPLFRRRIHGSTRHQKLSYRMTPGDEVEDMYILLNEVKRQIPSVTAVSSGAIASDY 120
E +G+PL + G EVED+ L ++ V + +GA+AS Y
Sbjct: 56 EAVGIPLIKLYTKGEKEK-----------EVEDLKKGLEKL-----DVEGIVTGAVASIY 99
Query: 121 QRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGINAITVKVAAMGLEPGKH-LGKEI 179
Q+ R++ VC LGL S A LW +D +L+ ++ N V V A GL GK LGK I
Sbjct: 100 QKSRIDRVCEELGLKSFAPLWHKDPEWILR-TVSELFNVRIVGVYAYGL--GKEWLGKRI 156
Query: 180 A--FLDPYLHKLKESYGINVCGEGGEYETLTLDCPLFVNARIVLDEFQVVLH 229
+D L+ + E YGI+ EGGE ET D P+F RI + E ++ H
Sbjct: 157 TKENIDKLLN-ICEKYGIHKAFEGGEAETFVFDAPMF-KKRIEVVEAEIEWH 206
>sp|P52758|UK114_HUMAN Ribonuclease UK114 OS=Homo sapiens GN=HRSP12 PE=1 SV=1
Length = 137
Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 18/131 (13%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP IGPYSQA L + ++GQ+G+DP + L +GG E +QAL+N + K C
Sbjct: 14 APGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKAAGCDF 73
Query: 492 STSAIYFVVYCSTYVASSERLKIQEKLDAFLKQMRVWHFEERSMSKVLDPIFLFVLASNL 551
+ VV + +A ++ KQ +F R+ +V + L
Sbjct: 74 TN-----VVKTTVLLADINDFN---TVNEIYKQYFKSNFPARAAYQV----------AAL 115
Query: 552 PKSALVEIKPI 562
PK + +EI+ +
Sbjct: 116 PKGSRIEIEAV 126
>sp|P80601|UK114_CAPHI Ribonuclease UK114 OS=Capra hircus GN=HRSP12 PE=1 SV=3
Length = 137
Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP+ IGPYSQA L + ++GQLG+DP + L GG E +QAL N + K C
Sbjct: 14 APAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVVEEAKQALTNIGEILKAAGCDF 73
Query: 492 S 492
+
Sbjct: 74 T 74
>sp|Q3T114|UK114_BOVIN Ribonuclease UK114 OS=Bos taurus GN=HRSP12 PE=2 SV=3
Length = 137
Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP+ IGPYSQA L + ++GQLG+DP + L GG E +QAL N + K C
Sbjct: 14 APAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVAEEAKQALTNIGEILKAAGCDF 73
Query: 492 S 492
+
Sbjct: 74 T 74
>sp|Q973T6|Y811_SULTO RutC family protein STK_08110 OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=STK_08110 PE=1
SV=1
Length = 125
Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 36/140 (25%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP +GPYSQA L ++GQ+ +DP T + G V+ Q L N + + K S+
Sbjct: 9 APKPVGPYSQAIKVGNTLYVSGQIPIDPRTNEIVKGDIKVQTRQVLDNIKEIVKAAGFSL 68
Query: 492 STSAIYFVVYCSTYVASSERLKIQEKLDAFLKQMRVW---------HFEERSMSKVLDPI 542
S A+ FV FLK M ++ +F+++ ++V
Sbjct: 69 SDVAMAFV---------------------FLKDMNMFNDFNSVYAEYFKDKPPARVT--- 104
Query: 543 FLFVLASNLPKSALVEIKPI 562
V S LPK AL+EI I
Sbjct: 105 ---VEVSRLPKDALIEIAVI 121
>sp|P52760|UK114_MOUSE Ribonuclease UK114 OS=Mus musculus GN=Hrsp12 PE=1 SV=3
Length = 135
Score = 52.4 bits (124), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP+ IGPYSQA + ++GQ+GLDP + L GG E +QAL+N + K C
Sbjct: 14 APAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGEILKAAGCDF 73
Query: 492 S 492
+
Sbjct: 74 N 74
Score = 34.3 bits (77), Expect = 4.2, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 326 QKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEK 385
Q G++++ + LK + L G D+ +V+ + ++DMN+F NE Y +
Sbjct: 45 QLVPGGVVEEAKQALKNLGEILKAAGCDFNNVVKTTVLLADMNDFGTVNEIYKTYFQGS- 103
Query: 386 CPCGVPSRSTIELPLLEVG 404
+P+R+ ++ L G
Sbjct: 104 ----LPARAAYQVAALPRG 118
>sp|Q8U308|RIDA_PYRFU Enamine/imine deaminase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=yjgF PE=1 SV=1
Length = 126
Score = 51.2 bits (121), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 22/135 (16%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP IGPYSQA L +AGQ+ +DP T + G + Q L+N +A+ + S+
Sbjct: 10 APKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKAQTRQVLENIKAILEAAGYSL 69
Query: 492 STSAIYFVVYCSTYVASSERLKIQEKLDAFLKQMRVW--HFEERSMSKVLDPIFLFVLAS 549
+ VV + Y+ + ++ F K V+ +F E P V S
Sbjct: 70 TD-----VVKVTVYL---------KDMNDFAKMNEVYAEYFGESK------PARAAVEVS 109
Query: 550 NLPKSALVEIKPILY 564
LPK L+EI+ I Y
Sbjct: 110 RLPKDVLIEIEAIAY 124
Score = 41.2 bits (95), Expect = 0.031, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 337 RVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSRSTI 396
R VL+ I++ L G+ V+ + +Y+ DMN+FA NE Y ++ K P+R+ +
Sbjct: 52 RQVLENIKAILEAAGYSLTDVVKVTVYLKDMNDFAKMNEVYAEYFGESK-----PARAAV 106
Query: 397 ELPLL 401
E+ L
Sbjct: 107 EVSRL 111
>sp|P52759|UK114_RAT Ribonuclease UK114 OS=Rattus norvegicus GN=Hrsp12 PE=1 SV=3
Length = 137
Score = 50.8 bits (120), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP+ IG YSQA L + ++GQ+G+DP + L GG E +QAL+N + K C
Sbjct: 14 APAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGEILKAAGCDF 73
Query: 492 S 492
+
Sbjct: 74 T 74
>sp|O58584|Y854_PYRHO RutC family protein PH0854 OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=PH0854 PE=1 SV=2
Length = 126
Score = 50.4 bits (119), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 22/135 (16%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP IGPYSQA L +AGQ+ +DP T + G + Q L+N +A+ + S+
Sbjct: 10 APKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKDQTRQVLENIKAILEAAGYSL 69
Query: 492 STSAIYFVVYCSTYVASSERLKIQEKLDAFLKQMRVW--HFEERSMSKVLDPIFLFVLAS 549
+ V+ + Y+ + ++ F K V+ +F E ++V V S
Sbjct: 70 ND-----VIKVTVYL---------KDMNDFAKMNEVYAEYFGESKPARVA------VEVS 109
Query: 550 NLPKSALVEIKPILY 564
LPK L+EI+ I Y
Sbjct: 110 RLPKDVLIEIEAIAY 124
Score = 42.7 bits (99), Expect = 0.011, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 334 DDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSR 393
D R VL+ I++ L G+ V+ + +Y+ DMN+FA NE Y ++ K P+R
Sbjct: 49 DQTRQVLENIKAILEAAGYSLNDVIKVTVYLKDMNDFAKMNEVYAEYFGESK-----PAR 103
Query: 394 STIELPLL 401
+E+ L
Sbjct: 104 VAVEVSRL 111
>sp|P55654|Y4SK_RHISN RutC family protein y4sK OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01620 PE=3 SV=1
Length = 126
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP +GPYSQA ++L ++GQL +DP T + + EQ L+N +A+A+ +
Sbjct: 10 APGAVGPYSQAIKVGDLLFVSGQLPIDPATGEFNSANAVEQAEQCLKNLQAIARAAGTDL 69
Query: 492 STS 494
S +
Sbjct: 70 SKT 72
>sp|Q9UZA3|Y1251_PYRAB RutC family protein PYRAB12510 OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=PYRAB12510 PE=3 SV=1
Length = 127
Score = 45.8 bits (107), Expect = 0.001, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP IGPYSQA + +AGQ+ +DP T + G + ++ ++N +A+ + S+
Sbjct: 11 APKPIGPYSQAIKVGNFIFVAGQIPIDPETGEIVKGDIKEQTKRVIENIKAILEEAGASL 70
Query: 492 STSAIYFVVYCSTYVASSERLKIQEKLDAFLKQMRVW--HFEERSMSKVLDPIFLFVLAS 549
+ VV + Y+ + L+ F K V+ +F E ++V V S
Sbjct: 71 ND-----VVKVTVYL---------KDLNDFAKMNEVYSEYFGESKPARVA------VEVS 110
Query: 550 NLPKSALVEIKPILY 564
LPK L+E++ I Y
Sbjct: 111 RLPKDVLIEMEAIAY 125
Score = 34.3 bits (77), Expect = 3.6, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 339 VLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSRSTIEL 398
V++ I++ L G V+ + +Y+ D+N+FA NE Y ++ K P+R +E+
Sbjct: 55 VIENIKAILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESK-----PARVAVEV 109
Query: 399 PLL 401
L
Sbjct: 110 SRL 112
>sp|P52761|Y709_SYNY3 RutC family protein slr0709 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=slr0709 PE=3 SV=1
Length = 130
Score = 44.7 bits (104), Expect = 0.003, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLC-NGGPTVELEQALQNSEAVAKCFNC 489
AP+ +GPY+QA L AGQ+ LDP TMT+ G V+ +Q L N AV + C
Sbjct: 11 APAPVGPYNQAIAANGFLFTAGQIALDPQTMTIMGEGNVEVQAKQVLTNLGAVLQEAGC 69
Score = 33.9 bits (76), Expect = 5.5, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 339 VLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSRSTIEL 398
VL + + L G W +V+ +++ DMN+FA N Y ++ P+RS +E+
Sbjct: 56 VLTNLGAVLQEAGCGWENVVKTTVFLKDMNDFAAVNAIYGQYFDEAT----APARSCVEV 111
Query: 399 PLL 401
L
Sbjct: 112 ARL 114
>sp|P0AGL4|TDCF_SHIFL Putative reactive intermediate deaminase TdcF OS=Shigella flexneri
GN=tdcF PE=3 SV=1
Length = 129
Score = 43.5 bits (101), Expect = 0.007, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 324 ETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITH 383
+T + A + D R+ L+ +++ +V G G ++ + ++I+D+N+FA NE Y +F
Sbjct: 38 QTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDE 97
Query: 384 EKCPCGVPSRSTIELPLL 401
+ P+RS +++ L
Sbjct: 98 HQAT--YPTRSCVQVARL 113
>sp|P0AGL2|TDCF_ECOLI Putative reactive intermediate deaminase TdcF OS=Escherichia coli
(strain K12) GN=tdcF PE=1 SV=1
Length = 129
Score = 43.5 bits (101), Expect = 0.007, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 324 ETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITH 383
+T + A + D R+ L+ +++ +V G G ++ + ++I+D+N+FA NE Y +F
Sbjct: 38 QTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDE 97
Query: 384 EKCPCGVPSRSTIELPLL 401
+ P+RS +++ L
Sbjct: 98 HQAT--YPTRSCVQVARL 113
>sp|P0AGL3|TDCF_ECOL6 Putative reactive intermediate deaminase TdcF OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=tdcF PE=3
SV=1
Length = 129
Score = 43.5 bits (101), Expect = 0.007, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 324 ETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITH 383
+T + A + D R+ L+ +++ +V G G ++ + ++I+D+N+FA NE Y +F
Sbjct: 38 QTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDE 97
Query: 384 EKCPCGVPSRSTIELPLL 401
+ P+RS +++ L
Sbjct: 98 HQAT--YPTRSCVQVARL 113
>sp|O52178|DFRA_MYXXA Protein DfrA OS=Myxococcus xanthus GN=dfrA PE=3 SV=1
Length = 131
Score = 42.7 bits (99), Expect = 0.010, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 432 APSCIGPYSQATL--HKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNC 489
AP IGPYSQA ++ ++GQ+ LDP TM + G + E+ ++N +AV
Sbjct: 14 APKAIGPYSQAVQVDAGKMTFLSGQIPLDPATMEMVQGDVVAQAERVMENLKAV------ 67
Query: 490 SISTSAIYF--VVYCSTYV 506
++ S + F VV C+ ++
Sbjct: 68 -LAASGLDFSHVVRCTIFL 85
Score = 40.0 bits (92), Expect = 0.073, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 339 VLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSRSTIEL 398
V++ +++ L G D+ HV+ ++++D+ +FA NE Y ++ T P+R+T+++
Sbjct: 60 VMENLKAVLAASGLDFSHVVRCTIFLTDLGDFARVNEVYGRYFTGAP-----PARATVQV 114
Query: 399 PLLEVG 404
L G
Sbjct: 115 SALPRG 120
>sp|P37552|RIDA_BACSU Enamine/imine deaminase OS=Bacillus subtilis (strain 168) GN=yabJ
PE=1 SV=3
Length = 125
Score = 42.7 bits (99), Expect = 0.010, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP+ IGPYSQ + + +GQ+ L P+ + NG + Q N +AV + S
Sbjct: 10 APAAIGPYSQGIIVNNMFYSSGQIPLT-PSGEMVNGDIKEQTHQVFSNLKAVLEEAGASF 68
Query: 492 STSAIYFVVYCSTYVASSERLKIQEKLDAFLKQMRVWHFEERSMSKVLDPIFLFVLASNL 551
T VV + ++A E+ +++ Q H RS +V + L
Sbjct: 69 ET-----VVKATVFIADMEQFA---EVNEVYGQYFDTHKPARSCVEV----------ARL 110
Query: 552 PKSALVEIKPILYV 565
PK ALVEI+ I V
Sbjct: 111 PKDALVEIEVIALV 124
>sp|P97117|Y142_LEUMC RutC family protein in leuC 5'region OS=Leuconostoc mesenteroides
subsp. cremoris PE=3 SV=1
Length = 130
Score = 42.7 bits (99), Expect = 0.011, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 419 SKRVLHVQSISCWAPSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQ 478
SK+V+ + AP +GPYSQA L+ L ++GQ+G+DP T + Q
Sbjct: 2 SKKVVSTTT----APKALGPYSQAILNDNTLYISGQIGIDPETDEFAGATTAEQAHQIFD 57
Query: 479 NSEAV---AKCFNCSISTSAIYF 498
N + + A+ I +A++F
Sbjct: 58 NIDNILHEAEFSRNDIVKAALFF 80
>sp|Q9KWS2|AMND_PSESP 2-aminomuconate deaminase OS=Pseudomonas sp. GN=amnD PE=1 SV=1
Length = 142
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 308 SRRKKDNTFSICCWLQETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDM 367
S R+ DNTF + +T + + R V+ I L G D G V+ + Y+ +M
Sbjct: 38 SSRRPDNTF-VGAEPDDTGRPRPNIELQTREVISNIRDILQSVGADLGDVVEVCSYLVNM 96
Query: 368 NEFAVANETYVKFITHEKCPCGVPSRSTIEL 398
N+FA N+ Y +F P+R+T+ +
Sbjct: 97 NDFAAYNKVYAEFFD-----ATGPARTTVAV 122
>sp|Q10121|YSD2_CAEEL RutC family protein C23G10.2 OS=Caenorhabditis elegans GN=C23G10.2
PE=3 SV=3
Length = 171
Score = 42.0 bits (97), Expect = 0.019, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 417 DQSKRVLHVQSISCWAPSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQA 476
D +++V S AP IGPYSQA + ++G LGLDP T L G + Q+
Sbjct: 34 DMAQKVTRQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDL-KEGVVEQTHQS 92
Query: 477 LQNSEAVAK 485
L+N V K
Sbjct: 93 LKNLGEVLK 101
>sp|P40431|YVN1_AZOVI RutC family protein in vnfA 5'region OS=Azotobacter vinelandii PE=3
SV=2
Length = 127
Score = 41.6 bits (96), Expect = 0.022, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAK 485
AP+ IG YSQA + + ++GQ+ LDP TM L G + + +N +AV +
Sbjct: 11 APAAIGTYSQAIRAGDTVYLSGQIPLDPGTMELVEGDFEAQTVRVFENLKAVVE 64
>sp|Q9ZKQ6|Y944_HELPJ RutC family protein jhp_0879 OS=Helicobacter pylori (strain J99)
GN=jhp_0879 PE=3 SV=1
Length = 125
Score = 41.6 bits (96), Expect = 0.024, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 420 KRVLHVQSISCWAPSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQN 479
K V+H S AP IGPYSQA +++ ++GQLG+D T + Q+++N
Sbjct: 2 KEVIH----STLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMEN 57
Query: 480 SEAVAK 485
+A+ K
Sbjct: 58 IKAILK 63
>sp|O25598|Y944_HELPY RutC family protein HP_0944 OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=HP_0944 PE=3 SV=1
Length = 125
Score = 41.6 bits (96), Expect = 0.025, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 420 KRVLHVQSISCWAPSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQN 479
K V+H S AP IGPYSQA +++ ++GQLG+D T + Q+++N
Sbjct: 2 KEVIH----STLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMEN 57
Query: 480 SEAVAK 485
+A+ K
Sbjct: 58 IKAILK 63
>sp|Q9UR06|MMF2_SCHPO Protein mmf2, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mmf2 PE=3 SV=1
Length = 126
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 20/107 (18%)
Query: 312 KDNTFSICCWLQETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFA 371
KD F ++T+ T L + LRV +E KLV+ ++++++D+++FA
Sbjct: 36 KDGNFVPGTIQEQTRLTIENLAEVLRVAGSSLE-KLVK----------VNIFLTDIDDFA 84
Query: 372 VANETYVKFITHEKCPCGVPSRSTI---ELPLLEVGLGKAYIEVLVA 415
NE Y E P +P+R+T+ ++PL G GK IE + A
Sbjct: 85 AMNEVY-----KEMLPDPMPARTTVAAGKIPLSSKG-GKIEIECIAA 125
>sp|O34133|ALDR_LACLA Putative regulator AldR OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=aldR PE=3 SV=2
Length = 126
Score = 38.1 bits (87), Expect = 0.25, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP+ IGPY Q + +L +GQ+ L+P + + EQ ++N A+ K
Sbjct: 9 APAAIGPYVQGKIVNGLLYASGQIPLNPLNGEIVGDSIETQTEQVMKNISAILK-----E 63
Query: 492 STSAIYFVVYCSTYVASSERLKIQEKLDAFLKQMRVWHFEERSMSKVLDPIFLFVLASNL 551
+ S V+ + ++ + E + +A + F RS V + L
Sbjct: 64 AHSDFDLVIKTTCFLKNIEDF---SRFNAIYSKFFDKEFPARSAVGV----------AGL 110
Query: 552 PKSALVEIKPILYV 565
PK+ L+EI+ I V
Sbjct: 111 PKNVLIEIEVIAEV 124
>sp|P44839|Y719_HAEIN RutC family protein HI_0719 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=HI_0719 PE=1 SV=1
Length = 130
Score = 37.4 bits (85), Expect = 0.40, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 325 TQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHE 384
T + A ++ R L+ +++ + + G ++ +++ D+N+FA N Y +F
Sbjct: 40 TGEVPADIVAQARQSLENVKAIIEKAGLTAADIVKTTVFVKDLNDFAAVNAEYERFFKEN 99
Query: 385 KCPCGVPSRSTIELPLL--EVGL 405
P P+RS +E+ L +VGL
Sbjct: 100 NHP-NFPARSCVEVARLPKDVGL 121
>sp|Q9L6B5|Y1466_PASMU RutC family protein PM1466 OS=Pasteurella multocida (strain Pm70)
GN=PM1466 PE=3 SV=1
Length = 129
Score = 37.4 bits (85), Expect = 0.42, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 324 ETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITH 383
+T + A ++ R L+ +++ + + G +++ +++ D+N+FA N Y +F
Sbjct: 38 KTGEVPADIVAQARQSLENVKAIVEQAGLQVANIVKTTVFVKDLNDFAAVNAEYERFFKE 97
Query: 384 EKCPCGVPSRSTIELPLLEVGLG 406
P P+RS +E+ L +G
Sbjct: 98 NNHP-SFPARSCVEVARLPKDVG 119
Score = 35.0 bits (79), Expect = 2.3, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 21/143 (14%)
Query: 421 RVLHVQSISCWAPSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNS 480
+V+H + AP+ IGPY QA +L +GQ+ ++P T + + Q+L+N
Sbjct: 3 KVIHTDN----APAAIGPYVQAVDLGNMLLTSGQIPVNPKTGEV-PADIVAQARQSLENV 57
Query: 481 EAVAKCFNCSISTSAIYFVVYCSTYVAS-SERLKIQEKLDAFLKQMRVWHFEERSMSKVL 539
+A+ + ++ +V + +V ++ + + + F K+ F RS +V
Sbjct: 58 KAIVEQAGLQVAN-----IVKTTVFVKDLNDFAAVNAEYERFFKENNHPSFPARSCVEV- 111
Query: 540 DPIFLFVLASNLPKSALVEIKPI 562
+ LPK +EI+ I
Sbjct: 112 ---------ARLPKDVGIEIEAI 125
>sp|Q97U19|Y3206_SULSO RutC family protein SSO3206 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=SSO3206 PE=3 SV=1
Length = 126
Score = 36.2 bits (82), Expect = 0.96, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 24/134 (17%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAVAKCFNCSI 491
AP IGPYSQ ++L ++GQ+ +DP T + + + ++N +AV + +
Sbjct: 10 APKPIGPYSQGVKVGDILYVSGQIPVDPKTNEVVGKNIEEQTIRVIENIKAVLEAAGYML 69
Query: 492 STSAIYFVVYCSTYVASSERLKIQEKLDAFLKQMRVWHFEERSMSKVLD---PIFLFVLA 548
+ FV +LK ++ + SK P + V
Sbjct: 70 DDVVMSFV---------------------YLKDIKDFQRFNEVYSKYFSNKPPARVTVEV 108
Query: 549 SNLPKSALVEIKPI 562
S LP+ L+EI I
Sbjct: 109 SRLPRDVLIEITVI 122
>sp|P0AF95|RIDA_SHIFL Enamine/imine deaminase OS=Shigella flexneri GN=yjgF PE=3 SV=2
Length = 128
Score = 36.2 bits (82), Expect = 1.0, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 324 ETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITH 383
+T + A + R L +++ + G G ++ +++ D+N+FA N TY F T
Sbjct: 38 KTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTE 97
Query: 384 EKCPCGVPSRSTIELPLL 401
P+RS +E+ L
Sbjct: 98 HNAT--FPARSCVEVARL 113
>sp|P0AF93|RIDA_ECOLI Enamine/imine deaminase OS=Escherichia coli (strain K12) GN=ridA
PE=1 SV=2
Length = 128
Score = 36.2 bits (82), Expect = 1.0, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 324 ETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITH 383
+T + A + R L +++ + G G ++ +++ D+N+FA N TY F T
Sbjct: 38 KTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTE 97
Query: 384 EKCPCGVPSRSTIELPLL 401
P+RS +E+ L
Sbjct: 98 HNAT--FPARSCVEVARL 113
>sp|P0AF94|RIDA_ECOL6 Enamine/imine deaminase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=yjgF PE=3 SV=2
Length = 128
Score = 36.2 bits (82), Expect = 1.0, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 324 ETQKTSAGLLDDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITH 383
+T + A + R L +++ + G G ++ +++ D+N+FA N TY F T
Sbjct: 38 KTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTE 97
Query: 384 EKCPCGVPSRSTIELPLL 401
P+RS +E+ L
Sbjct: 98 HNAT--FPARSCVEVARL 113
>sp|Q7CP78|RIDA_SALTY Enamine/imine deaminase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=ridA PE=1 SV=1
Length = 128
Score = 35.8 bits (81), Expect = 1.4, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 337 RVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSRSTI 396
R L+ +++ + G G ++ +++ D+N+FA N TY F T P+RS +
Sbjct: 51 RQSLENVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNAT--FPARSCV 108
Query: 397 ELPLL 401
E+ L
Sbjct: 109 EVARL 113
>sp|O66689|Y364_AQUAE RutC family protein aq_364 OS=Aquifex aeolicus (strain VF5)
GN=aq_364 PE=3 SV=1
Length = 125
Score = 35.4 bits (80), Expect = 1.6, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 432 APSCIGPYSQATLHKEVLQMAGQLGLDPPTMTLCNGGPTVELEQALQNSEAV 483
AP +GPYSQA L ++GQ+G++P T L G ++ Q +N +A+
Sbjct: 9 APVPVGPYSQAVEVNGFLFISGQIGINPETGKLVEGFKE-QVIQIFKNVDAI 59
>sp|O43003|MMF1_SCHPO Protein mmf1, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mmf1 PE=3 SV=1
Length = 162
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 334 DDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSR 393
D R L ++ L G ++ ++++++DM++FA N+ Y + + K P+R
Sbjct: 83 DQTRQCLLNLQEVLTEAGSSLNKIVKVNIFLADMDDFAAVNKVYTEVLPDPK-----PAR 137
Query: 394 STIELPLLEVGLGKAYIEV 412
S + + + + IE+
Sbjct: 138 SCVAVKTVPLSTQGVKIEI 156
>sp|Q313S6|MNMA_DESDG tRNA-specific 2-thiouridylase MnmA OS=Desulfovibrio desulfuricans
(strain G20) GN=mnmA PE=3 SV=1
Length = 356
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 1 MKVVALVSGGKDSCYAMMKCIQYGHQIVAL 30
M + VSGG DS +A+++ ++ GHQ+ AL
Sbjct: 1 MHIAVAVSGGTDSLFALLQVLEAGHQVTAL 30
>sp|Q9HBK9|AS3MT_HUMAN Arsenite methyltransferase OS=Homo sapiens GN=AS3MT PE=1 SV=3
Length = 375
Score = 33.1 bits (74), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 12/135 (8%)
Query: 336 LRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCG-VPSRS 394
+ V K ++ + +YGF +V +IH YI + E + NE++ +++ C VP +
Sbjct: 108 VEVAEKYLDYHMEKYGFQASNVTFIHGYIEKLGEAGIKNESHDIVVSN--CVINLVPDKQ 165
Query: 395 TI---ELPLLEVGLGKAYIEVLVANDQSKRVLHVQSISCWAPSCIGPYSQATLHKEVLQM 451
+ +L+ G G+ Y + + + + + W C+G A KE+ +
Sbjct: 166 QVLQEAYRVLKHG-GELYFSDVYTSLELPEEIRTHKV-LWG-ECLGG---ALYWKELAVL 219
Query: 452 AGQLGLDPPTMTLCN 466
A ++G PP + N
Sbjct: 220 AQKIGFCPPRLVTAN 234
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 260,279,577
Number of Sequences: 539616
Number of extensions: 10534422
Number of successful extensions: 24920
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 24827
Number of HSP's gapped (non-prelim): 76
length of query: 742
length of database: 191,569,459
effective HSP length: 125
effective length of query: 617
effective length of database: 124,117,459
effective search space: 76580472203
effective search space used: 76580472203
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)